BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 046194
         (934 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score = 1400 bits (3625), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 690/980 (70%), Positives = 800/980 (81%), Gaps = 46/980 (4%)

Query: 1    SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
            S++A+  HLQ +K+GF  ++FL NTLIN+YVR+GDL SA KLFDEM +RN V+WAC++SG
Sbjct: 560  SEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISG 619

Query: 61   YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
            YT  G  +EAC  F++MVRAGF+ N YA GS LRACQE GPSG K G+Q+H L+ K+   
Sbjct: 620  YTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 679

Query: 121  FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
             D +V NVLI+MYGSCL+S + AR +F+ I  R+ ISWNSIISVYS+RGD +S + LFS 
Sbjct: 680  SDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSS 739

Query: 181  MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
            MQ+EG  +S KPNEYTFGSLITAA SSV  G  +L+Q+LA V+K+G L DLYVGSALVSG
Sbjct: 740  MQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSG 799

Query: 241  FARLGNFYYARKIFEQMIQKNVVSMNGLM------------------------------- 269
            FAR G    A+ IFEQM  +NVVSMNGLM                               
Sbjct: 800  FARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYV 859

Query: 270  -------------EGRRKGKEVHGYLIRSGLFD-MVAVGNGLVNMYAKCGTIDDSRSVFR 315
                         EGRRKG+EVH ++IR+GL D  VA+GNGLVNMYAK G I D+ SVF 
Sbjct: 860  VLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFE 919

Query: 316  FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
             M+ KDSVSWN++ISGLDQN C E+A  +F  MRR G M SNF+LISTLSSCASLGWIML
Sbjct: 920  LMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIML 979

Query: 376  GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
            G+QIH +GLKLGLD+DVSVSNALL+LYA+ G  + CLKVF LMPE+DQVSWNSVIGA +D
Sbjct: 980  GEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSD 1039

Query: 436  SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
            SEA VS+AVKY+L+M R GW  + VTFINIL+A SS S+ ++ HQ+HA V+KY ++++T 
Sbjct: 1040 SEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTA 1099

Query: 496  IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
            I NALLSCYGKCGEM++CEKIFARMSE RDEVSWNSMISGYIHNELL KAM+LVWFMMQ+
Sbjct: 1100 IGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQK 1159

Query: 556  GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
            GQRLD FTFATVLSACASVATLERGMEVHACG+RAC+E DVV+GSALVDMYSKCGRIDYA
Sbjct: 1160 GQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYA 1219

Query: 616  SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT-FVGVLSACSH 674
            SRFF+LMP+RNVYSWNSMISGYARHGHG+KAL LF++M LDG  PDHV   +GVLSACSH
Sbjct: 1220 SRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSH 1279

Query: 675  AGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWR 734
             G V+EGF+HFKSMS+VY L P++E FSCMVDLLGRAG+LD++ +FIN MP+ PN LIWR
Sbjct: 1280 VGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWR 1339

Query: 735  TVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKE 794
            TVLGACCRAN R TELGR+AA ML E+EPQNAVNYVLLANMYASG KWEDVAKAR AMKE
Sbjct: 1340 TVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXAMKE 1399

Query: 795  AEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFD 854
            A VKKEAGCSWVTMKDGVHVFVAGD+ HPEKD IY+KL+ELN+KMRDAGY+PQTK+ALFD
Sbjct: 1400 AAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRDAGYIPQTKYALFD 1459

Query: 855  LEPESKEDLVSYHSEKIAVAFVLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
            LE E+KE+L+SYHSEKIAVAFVLTR S LPIRIMKNLRVCGDCHSAF +ISKIVGR+IVL
Sbjct: 1460 LELENKEELLSYHSEKIAVAFVLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVL 1519

Query: 915  RDSNRFHHFNDGKCSCGDYW 934
            RDSNRFHHF DGKCSCGDYW
Sbjct: 1520 RDSNRFHHFEDGKCSCGDYW 1539



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 58/114 (50%)

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           TF ++++        E   E+H   ++     ++ + + L+++Y + G +  A + FD M
Sbjct: 546 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
             RN+ +W  +ISGY ++G  D+A   F  M   G +P+H  F   L AC  +G
Sbjct: 606 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 659


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score = 1373 bits (3555), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 660/979 (67%), Positives = 779/979 (79%), Gaps = 45/979 (4%)

Query: 1    SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
            SKDA+  HLQ+ K+GF  D+FLCNTLIN+Y RVGDL S  K+FDEMP RN VSW+C++SG
Sbjct: 89   SKDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISG 148

Query: 61   YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
            YT   M NEAC++F++MV  GF+ N YA GSV+RACQECG  G KFGMQ+H L+ K+   
Sbjct: 149  YTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYV 208

Query: 121  FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
             D   SNVLI+MYG+ L   D ARR F+ I  R+L+S NS+ISVY QRGD +S F +FS 
Sbjct: 209  NDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFST 268

Query: 181  MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
            MQ+E     LKPNEYTFGSLI+A  S   SG  LL+Q+L  V+K+G L DLYVGSALVSG
Sbjct: 269  MQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSG 328

Query: 241  FARLGNFYYARKIFEQMIQKNVVSMNGLM------------------------------- 269
            FA+ G+  YA+ IF++M  +NVVS+NGL+                               
Sbjct: 329  FAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYM 388

Query: 270  -------------EGRRKGKEVHGYLIRSGLFD-MVAVGNGLVNMYAKCGTIDDSRSVFR 315
                          G+RKG EVH +LIRSGL +  +A+GNGL+NMYAKCG I+D+  VFR
Sbjct: 389  IILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFR 448

Query: 316  FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
             M  KDSV+WN+MI+GLDQN  + EA+  F  MRR  L  SNF++IS LSSCASLGWI +
Sbjct: 449  LMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISV 508

Query: 376  GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
            G+Q+H EGLKLGLD DVSVSNALL+LY + GY+  C K F LM ++D VSWNS+IGA AD
Sbjct: 509  GEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALAD 568

Query: 436  SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
            SE  + EAV+ +L M RAGW PN VTFI ILAA SS S+ +LG Q+HA V+K NVA +T 
Sbjct: 569  SEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTA 628

Query: 496  IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
            IENALL+CYGKCG+M  CE IF+RMS+R+DEVSWNSMISGYIHNELLPKAM++VWFMMQ+
Sbjct: 629  IENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQK 688

Query: 556  GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
            GQRLD FTFATVLSACA+VATLERGMEVH C VRACLE D+VIGSALVDMY+KCGRIDYA
Sbjct: 689  GQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYA 748

Query: 616  SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
            SRFF++MP RN+YSWNSMISGYARHGHG K+L LF+QMKL GPLPDHVTFVGVLSACSHA
Sbjct: 749  SRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHA 808

Query: 676  GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
            GLV+EGF HF SMS++YGL P++E FSCMVDLLGR GEL+K+E+F+N+MP+ PN LIWRT
Sbjct: 809  GLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRT 868

Query: 736  VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
            VLGACCRAN R T LGR+AA ML EMEP NAVNY+LL+NMYASGGKW+DVAK R AM++A
Sbjct: 869  VLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKA 928

Query: 796  EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
             VKKEAGCSWVTMKDGVHVFVAGD+SHPEKDLIYEKLKELN KMR AGY+P+T+FAL+DL
Sbjct: 929  FVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKMRLAGYIPETRFALYDL 988

Query: 856  EPESKEDLVSYHSEKIAVAFVLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLR 915
            E ESKE+L+SYHSEKIAVAFVLTR SK+PIRI+KNLRVCGDCHSAFK+IS+IV R+IVLR
Sbjct: 989  EGESKEELLSYHSEKIAVAFVLTRPSKMPIRILKNLRVCGDCHSAFKYISQIVERQIVLR 1048

Query: 916  DSNRFHHFNDGKCSCGDYW 934
            DSNRFHHF +GKCSCGD+W
Sbjct: 1049 DSNRFHHFENGKCSCGDFW 1067



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 159/609 (26%), Positives = 289/609 (47%), Gaps = 69/609 (11%)

Query: 211 GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
           GS   +++   + K G ++DL++ + L++ +AR+G+    RK+F++M  +N+VS + L+ 
Sbjct: 88  GSKDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLIS 147

Query: 271 GRRK-------------------------------------------GKEVHGYLIRSGL 287
           G  +                                           G ++HG + ++  
Sbjct: 148 GYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQY 207

Query: 288 FDMVAVGNGLVNMYAKC-GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
            + V   N L++MY    G +D +R  F  +  ++ VS N+MIS   Q G    A   F 
Sbjct: 208 VNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFS 267

Query: 347 AMRR----DGLMSSNF---SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
            M++    DGL  + +   SLIS   S A+ G ++L +Q+     K G   D+ V +AL+
Sbjct: 268 TMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLL-EQLLTRVEKSGFLHDLYVGSALV 326

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA-GWSPN 458
           S +A AG +     +F  M   + VS N +I      +    EAV+ +++M+ +   +PN
Sbjct: 327 SGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLV-RQKRGEEAVELFMEMKDSVELNPN 385

Query: 459 GVTFINILAAASSFSM----GKLGHQVHAQVIKYNVAN-ETTIENALLSCYGKCGEMDDC 513
             +++ IL A   F +     + G +VHA +I+  + N +  I N L++ Y KCG ++D 
Sbjct: 386 --SYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDA 443

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
             +F R+ + +D V+WNSMI+G   N+   +A+     M +      +FT  + LS+CAS
Sbjct: 444 CVVF-RLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCAS 502

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           +  +  G ++H  G++  L+ DV + +AL+ +Y +CG +    + F LM   +  SWNS+
Sbjct: 503 LGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSL 562

Query: 634 ISGYARHGHGD-KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           I   A       +A+  F  M   G  P+ VTF+ +L+A S   L + G K   ++    
Sbjct: 563 IGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELG-KQIHALVLKR 621

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
            +       + ++   G+ G++   E   ++M    + + W +++           EL  
Sbjct: 622 NVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIH-----NELLP 676

Query: 753 KAANMLFEM 761
           KA +M++ M
Sbjct: 677 KAMDMVWFM 685


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score = 1353 bits (3501), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 673/980 (68%), Positives = 787/980 (80%), Gaps = 48/980 (4%)

Query: 1    SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
            S++A+  HLQ +K+GF  ++FL NTLIN+YVR+GDL SA KLFDEM +RN V+WAC++SG
Sbjct: 87   SEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISG 146

Query: 61   YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
            YT  G  +EAC  F++MVRAGF+ N YA GS LRACQE GPSG K G+Q+H L+ K+   
Sbjct: 147  YTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 206

Query: 121  FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
             D +V NVLI+MYGSCL+S + AR +F+ I  R+ ISWNSIISVYS+RGD +S + LFS 
Sbjct: 207  SDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSS 266

Query: 181  MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
            MQ+EG  +S KPNEYTFGSLIT A SSV  G  +L+Q+LA V+K+G L DLYV SALVSG
Sbjct: 267  MQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSG 326

Query: 241  FARLGNFYYARKIFEQMIQKNVVSMNGLM------------------------------- 269
            FAR G    A+ IFEQM  +NVVSMNGLM                               
Sbjct: 327  FARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYV 386

Query: 270  -------------EGRRKGKEVHGYLIRSGLFD-MVAVGNGLVNMYAKCGTIDDSRSVFR 315
                         EGRRKG+EVH ++IR+GL D  VA+GNGLVNMYAK G I D+ SVF 
Sbjct: 387  VLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFE 446

Query: 316  FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
             M+ KDSVSWN++ISGLDQN C E+A  +F  MRR G M SNF+LISTLSSCASLGWIML
Sbjct: 447  LMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIML 506

Query: 376  GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
            G+QIH +GLKLGLD+DVSVSNALL+LYA+ G  + CLKVF LMPE+DQVSWNSVIGA +D
Sbjct: 507  GEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSD 566

Query: 436  SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
            SEA VS+AVKY+L M R GW  + VTFINIL+A SS S+ ++ HQ+HA V+KY ++++T 
Sbjct: 567  SEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTA 626

Query: 496  IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
            I NALLSCYGKCGEM++CEKIFARMSE RDEVSWNSMISGYIHNELL KAM+LVWFMMQ+
Sbjct: 627  IGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQK 686

Query: 556  GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
            GQRLD FTFAT+LSACASVATLERGMEVHACG+RACLE DVV+GSALVDMYSKCGRIDYA
Sbjct: 687  GQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYA 746

Query: 616  SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
            SRFF+LMP+RNVYSWNSMISGYARHGHG+KAL LF++M LDG  PDHVTFVGVLSACSH 
Sbjct: 747  SRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHV 806

Query: 676  GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
            G V+EGF+HFKSMS+VY L P++E FSCMVDLLGRAG+LD++ +FIN MP+ PN LIWRT
Sbjct: 807  GFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRT 866

Query: 736  VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
            VLGACCRAN R TELGR+AA ML E+EPQNAVNYVLLANMYASG KWEDVAKAR AMKEA
Sbjct: 867  VLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEA 926

Query: 796  EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
             VKKEAGCSWVTMKDGVHVFVAGD+ HPEKDLIY+KL+ELN+KMRDAGY+PQTK+ALFDL
Sbjct: 927  AVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDL 986

Query: 856  EPESKEDLVSYHSEKIAVAFVLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIV--GREIV 913
            E E+KE+L+SYHSEKIAVAFVLTR S LPIRIMKNLRVCGDCHSAF +ISKI+    ++ 
Sbjct: 987  ELENKEELLSYHSEKIAVAFVLTRQSALPIRIMKNLRVCGDCHSAFGYISKIIFFFLKMA 1046

Query: 914  LRDSNRFHHFNDGKCSCGDY 933
            ++ SN        +C CGD+
Sbjct: 1047 MKPSNNI-WIRRQQCPCGDW 1065



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 58/114 (50%)

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           TF ++++        E   E+H   ++     ++ + + L+++Y + G +  A + FD M
Sbjct: 73  TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 132

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
             RN+ +W  +ISGY ++G  D+A   F  M   G +P+H  F   L AC  +G
Sbjct: 133 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 186


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score = 1321 bits (3418), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/977 (65%), Positives = 772/977 (79%), Gaps = 45/977 (4%)

Query: 3    DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
            DA   HLQ+ K GF  DVF CNTLIN+YVR+G+L SA KLFDEMP +N VSW+C++SGYT
Sbjct: 158  DANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYT 217

Query: 63   HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
               M +EAC +FK ++ +G L N +A+GS LRACQ+CG +G K GMQ+H  + K     D
Sbjct: 218  QNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSD 277

Query: 123  GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             ++SNVL++MY  C  S D A R+F+EI+ R+ ++WNSIISVY +RGD +S FKLFS MQ
Sbjct: 278  MILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQ 337

Query: 183  REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             EG   +L+PNEYT  SL+TAA S    G  LL+Q+L  ++K+G L DLYVGSALV+GFA
Sbjct: 338  MEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFA 397

Query: 243  RLGNFYYARKIFEQMIQKNVVSMNGLM--------------------------------- 269
            R G    A+ IF+QM  +N V+MNGLM                                 
Sbjct: 398  RYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVL 457

Query: 270  -----------EGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                       EG+RKG+EVH YL RSGL D  +++GN LVNMY KC  ID++ SVF+ M
Sbjct: 458  LSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLM 517

Query: 318  IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
              KD+VSWN+MISGLD N  +EEA+  F  M+R+G++ SNFS+ISTLSSC+SLGW+ LG+
Sbjct: 518  PSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGR 577

Query: 378  QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
            QIHGEG K GLD DVSVSNALL+LYA+   ++ C KVFF MPE+DQVSWNS IGA A  E
Sbjct: 578  QIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYE 637

Query: 438  ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
            A V +A+KY+L+M +AGW PN VTFINILAA SSFS+  LGHQ+HA ++KY+VA++  IE
Sbjct: 638  ASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIE 697

Query: 498  NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ 557
            NALL+ YGKC +M+DCE IF+RMSERRDEVSWNSMISGY+H+ +L KAM+LVW MMQRGQ
Sbjct: 698  NALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQ 757

Query: 558  RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
            +LD FTFATVLSACASVATLERGMEVHAC VRACLE DVV+GSALVDMY+KCG+IDYASR
Sbjct: 758  KLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASR 817

Query: 618  FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGL 677
            FF+LMPVRN+YSWNSMISGYARHGHG KAL +F++MK  G  PDHVTFVGVLSACSH GL
Sbjct: 818  FFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGL 877

Query: 678  VDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
            VDEG+KHFKSM +VYGL P++E FSCMVDLLGRAG++ KIE+FI  MP+ PN LIWRTVL
Sbjct: 878  VDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVL 937

Query: 738  GACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEV 797
            GACCRAN R TELG++AA ML E+EPQNAVNYVLL+NM+A+GG WEDV +AR AM++A V
Sbjct: 938  GACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAV 997

Query: 798  KKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEP 857
            KK+AGCSWV MKDGVH+FVAGD++HPEK+ IYEKLKEL  K+RDAGYVP+TK+AL+DLE 
Sbjct: 998  KKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAGYVPETKYALYDLEL 1057

Query: 858  ESKEDLVSYHSEKIAVAFVLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDS 917
            E+KE+L+SYHSEK+A+AFVLTR S+LPIRIMKNLRVCGDCH+AFK+ISKIVGR+I+LRDS
Sbjct: 1058 ENKEELLSYHSEKLAIAFVLTRKSELPIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDS 1117

Query: 918  NRFHHFNDGKCSCGDYW 934
            NRFHHF  G CSCGDYW
Sbjct: 1118 NRFHHFGGGMCSCGDYW 1134


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score = 1312 bits (3396), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/978 (65%), Positives = 769/978 (78%), Gaps = 45/978 (4%)

Query: 2    KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
            +DA   HLQI K G   DVF CNTL+N++VR G+L SA KLFDEMP +N VSW+C+VSGY
Sbjct: 56   EDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGY 115

Query: 62   THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
               GM +EAC +F+ ++ AG L N YA+GS LRACQE GP+  K GM++H L+ KS    
Sbjct: 116  AQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYAS 175

Query: 122  DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
            D ++SNVL++MY  C  S D ARR+FEEI+ +   SWNSIISVY +RGD IS FKLFS M
Sbjct: 176  DMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSM 235

Query: 182  QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            QRE    + +PNEYTF SL+T A S V  G  LL+Q+LA ++K+  + DLYVGSALVSGF
Sbjct: 236  QREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGF 295

Query: 242  ARLGNFYYARKIFEQMIQKNVVSMNGLM-------------------------------- 269
            AR G    A+ IFEQM  +N V+MNGLM                                
Sbjct: 296  ARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYAV 355

Query: 270  ------------EGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRF 316
                        EG+RKG+EVH YLIR+ L D+ + +GN LVN+YAKC  ID++RS+F+ 
Sbjct: 356  LLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQL 415

Query: 317  MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
            M  KD+VSWN++ISGLD N  +EEA+  F  MRR+G++ S FS+ISTLSSCASLGWIMLG
Sbjct: 416  MPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLG 475

Query: 377  QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
            QQIHGEG+K GLD DVSVSNALL+LYA+   +    KVFFLMPE+DQVSWNS IGA A S
Sbjct: 476  QQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATS 535

Query: 437  EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
            EA V +A+KY+L+M +AGW PN VTFINIL+A SS S+ +LG Q+HA ++K++VA++  I
Sbjct: 536  EASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAI 595

Query: 497  ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
            EN LL+ YGKC +M+DCE IF+RMSERRDEVSWN+MISGYIHN +L KAM LVW MMQ+G
Sbjct: 596  ENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKG 655

Query: 557  QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
            QRLD FT ATVLSACASVATLERGMEVHAC +RACLE +VV+GSALVDMY+KCG+IDYAS
Sbjct: 656  QRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYAS 715

Query: 617  RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
            RFF+LMPVRN+YSWNSMISGYARHGHG KAL LF+QMK  G LPDHVTFVGVLSACSH G
Sbjct: 716  RFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVG 775

Query: 677  LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
            LVDEGF+HFKSM +VY L P++E FSCMVDLLGRAG++ K+EEFI  MP+ PN+LIWRT+
Sbjct: 776  LVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTI 835

Query: 737  LGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAE 796
            LGACCRAN R TELGR+AA ML E+EP NAVNYVLL+NM+A+GGKWEDV +AR AM+ AE
Sbjct: 836  LGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNAE 895

Query: 797  VKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLE 856
            VKKEAGCSWVTMKDGVHVFVAGD++HPEK+ IY+KLKE+  KMRD GYVP+TK+AL+DLE
Sbjct: 896  VKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMNKMRDLGYVPETKYALYDLE 955

Query: 857  PESKEDLVSYHSEKIAVAFVLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRD 916
             E+KE+L+SYHSEK+A+AFVLTR S+LPIRI+KNLRVCGDCH+AFK+IS IV R+I+LRD
Sbjct: 956  LENKEELLSYHSEKLAIAFVLTRQSELPIRIIKNLRVCGDCHTAFKYISNIVNRQIILRD 1015

Query: 917  SNRFHHFNDGKCSCGDYW 934
            SNRFHHF+ G CSC DYW
Sbjct: 1016 SNRFHHFDGGICSCQDYW 1033



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 5/130 (3%)

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
           T+E   ++H    +  L  DV   + LV+++ + G +  A + FD MP +N+ SW+ ++S
Sbjct: 54  TVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVS 113

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
           GYA++G  D+A  LF  +   G LP+H      L AC      + G    K   +++GLI
Sbjct: 114 GYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQ-----ELGPNMLKLGMEIHGLI 168

Query: 696 PQLEQFSCMV 705
            +    S MV
Sbjct: 169 SKSPYASDMV 178


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score = 1269 bits (3285), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/980 (63%), Positives = 750/980 (76%), Gaps = 53/980 (5%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+ FH ++ K+    DV+LCN LIN Y+  GD  SA K+FDEMP RN VSWACIVSGY+ 
Sbjct: 20  ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   EA    ++MV+ G   N+YA  SVLRACQE G  G  FG Q+H L+ K +   D 
Sbjct: 80  NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +VSNVLI+MY  C+ S   A   F +IE ++ +SWNSIISVYSQ GD  S F++FS MQ 
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           +G R    P EYTFGSL+T A S       LL+QI+  ++K+GLL+DL+VGS LVS FA+
Sbjct: 200 DGSR----PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAK 255

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------------- 272
            G+  YARK+F QM  +N V++NGLM G                                
Sbjct: 256 SGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILL 315

Query: 273 --------------RKGKEVHGYLIRSGLFD-MVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                         +KG+EVHG++I +GL D MV +GNGLVNMYAKCG+I D+R VF FM
Sbjct: 316 SSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM 375

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             KDSVSWN+MI+GLDQNGC+ EA+  + +MRR  ++  +F+LIS+LSSCASL W  LGQ
Sbjct: 376 TDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           QIHGE LKLG+D +VSVSNAL++LYA+ GYL+ C K+F  MPEHDQVSWNS+IGA A SE
Sbjct: 436 QIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSE 495

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
             + EAV  +L+ +RAG   N +TF ++L+A SS S G+LG Q+H   +K N+A+E T E
Sbjct: 496 RSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTE 555

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ 557
           NAL++CYGKCGEMD CEKIF+RM+ERRD V+WNSMISGYIHNELL KA++LVWFM+Q GQ
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQ 615

Query: 558 RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
           RLD F +ATVLSA ASVATLERGMEVHAC VRACLE DVV+GSALVDMYSKCGR+DYA R
Sbjct: 616 RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALR 675

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAG 676
           FF+ MPVRN YSWNSMISGYARHG G++AL LF  MKLDG   PDHVTFVGVLSACSHAG
Sbjct: 676 FFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
           L++EGFKHF+SMS  YGL P++E FSCM D+LGRAGELDK+E+FI KMP+ PN LIWRTV
Sbjct: 736 LLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTV 795

Query: 737 LGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAE 796
           LGACCRAN RK ELG+KAA MLF++EP+NAVNYVLL NMYA+GG+WED+ KARK MK+A+
Sbjct: 796 LGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDAD 855

Query: 797 VKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLE 856
           VKKEAG SWVTMKDGVH+FVAGD+SHP+ D+IY+KLKELN+KMRDAGYVPQT FAL+DLE
Sbjct: 856 VKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLE 915

Query: 857 PESKEDLVSYHSEKIAVAFVLT--RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
            E+KE+++SYHSEK+AVAFVL   R+S LPIRIMKNLRVCGDCHSAFK+ISKI GR+I+L
Sbjct: 916 QENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIIL 975

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RDSNRFHHF DG CSC D+W
Sbjct: 976 RDSNRFHHFQDGACSCSDFW 995



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 227/519 (43%), Gaps = 61/519 (11%)

Query: 2   KDAKLFHLQILKHGFA-YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           K  +  H  ++  G   + V + N L+N+Y + G +A A ++F  M D++SVSW  +++G
Sbjct: 330 KKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITG 389

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
               G   EA + +K M R   L   + L S L +C     +  K G Q+H   LK    
Sbjct: 390 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA--KLGQQIHGESLKLGID 447

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTI-SVFKLFS 179
            +  VSN L+ +Y       +C R+IF  +   D +SWNSII   ++   ++      F 
Sbjct: 448 LNVSVSNALMTLYAETGYLNEC-RKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFL 506

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
             QR G     K N  TF S+++A  S       L +QI  +  K  +  +    +AL++
Sbjct: 507 NAQRAG----QKLNRITFSSVLSAVSSLSF--GELGKQIHGLALKNNIADEATTENALIA 560

Query: 240 GFARLGNFYYARKIFEQMIQ-KNVVSMNGLMEGR-------------------------- 272
            + + G      KIF +M + ++ V+ N ++ G                           
Sbjct: 561 CYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSF 620

Query: 273 ---------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                           +G EVH   +R+ L   V VG+ LV+MY+KCG +D +   F  M
Sbjct: 621 MYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTM 680

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLG 376
             ++S SWN+MISG  ++G  EEA+  F  M+ DG    +  + +  LS+C+  G +  G
Sbjct: 681 PVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEG 740

Query: 377 QQIHGEGL--KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV-SWNSVIGAF 433
            + H E +    GL   +   + +  +   AG L +       MP    V  W +V+GA 
Sbjct: 741 FK-HFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC 799

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFI---NILAAA 469
             +    +E  K   +M       N V ++   N+ AA 
Sbjct: 800 CRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAG 838



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 127/272 (46%), Gaps = 9/272 (3%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +K  +  H + LK G   +V + N L+ +Y   G L    K+F  MP+ + VSW  I+  
Sbjct: 431 AKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGA 490

Query: 61  YTHKGMS-NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
                 S  EA   F    RAG  LNR    SVL A         + G Q+H L LK+N 
Sbjct: 491 LARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFG--ELGKQIHGLALKNNI 548

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             +    N LIA YG C E   C +      E RD ++WNS+IS Y           L  
Sbjct: 549 ADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVW 608

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            M + G R     + + + ++++ A++SV +    + ++ A   +A L SD+ VGSALV 
Sbjct: 609 FMLQTGQRL----DSFMYATVLS-AFASVATLERGM-EVHACSVRACLESDVVVGSALVD 662

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
            +++ G   YA + F  M  +N  S N ++ G
Sbjct: 663 MYSKCGRLDYALRFFNTMPVRNSYSWNSMISG 694


>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 970

 Score = 1206 bits (3119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/980 (61%), Positives = 725/980 (73%), Gaps = 78/980 (7%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AKLFH ++ K+G   DV+LCN LIN Y+  GD  SA K+FDEMP RN VSWAC+VSGY+ 
Sbjct: 20  AKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSR 79

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   EA    ++MV+ G   N YA  S LRACQE    G  FG Q+H L+ K +   D 
Sbjct: 80  NGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDA 139

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +VSNVLI+MY  C  S   A R F++++ ++ +SWNSIISVYSQ GD    FK+F  MQ 
Sbjct: 140 VVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQC 199

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           +G R    P EYTFGSL+T A S       LL+QI+  ++K+G L+DL+VGS LVS FA+
Sbjct: 200 DGSR----PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAK 255

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------------- 272
            G+  +ARKIF QM  +N V++NGLM G                                
Sbjct: 256 SGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILL 315

Query: 273 --------------RKGKEVHGYLIRSGLFD-MVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                         +KG+EVHG++I +GL D MV +GNGLVNMYAKCG+I D+R VF FM
Sbjct: 316 SSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFM 375

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             KDSVSWN+MI+GLDQN C+ EA+  + +MRR  ++  +F+LIS++SSCASL W  LGQ
Sbjct: 376 TEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQ 435

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           QIHGE LKLG+D +VSVSNAL++LYA+ G L+ C K+F  MPEHDQVSWNS+IGA A SE
Sbjct: 436 QIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSE 495

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
             + EAV  +L+  RAG   N +TF ++L+A SS S G+LG Q+H   +KYN+A+E T E
Sbjct: 496 RSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTE 555

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ 557
           NAL++CYGKCGEMD CEKIF+RMSERRD+V+WNSMISGYIHNELL KA++LVWFMMQ GQ
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMMQTGQ 615

Query: 558 RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
           RLD F +ATVLSA ASVATLERGMEVHAC VRACLE DVV+GSALVDMYSKCGR+DYA R
Sbjct: 616 RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALR 675

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAG 676
           FF+ MP                         LF+ MKLDG   PDHVTFVGVLSACSHAG
Sbjct: 676 FFNTMP-------------------------LFANMKLDGQTPPDHVTFVGVLSACSHAG 710

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
           L++EGFKHF+SMS  YGL P++E FSCM DLLGRAGELDK+E+FI KMP+ PN LIWRTV
Sbjct: 711 LLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIEKMPMKPNVLIWRTV 770

Query: 737 LGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAE 796
           LGACCRAN RK ELG+KAA MLF++EP+NAVNYVLL NMYA+GG+WED+ KARK MK+A+
Sbjct: 771 LGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDAD 830

Query: 797 VKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLE 856
           VKKEAG SWVTMKDGVH+FVAGD+SHP+ D+IY+KLKELN+KMRDAGYVPQT FAL+DLE
Sbjct: 831 VKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLE 890

Query: 857 PESKEDLVSYHSEKIAVAFVLT--RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
            E+KE+++SYHSEK+AVAFVL   R+S LPIRIMKNLRVCGDCHSAFK ISKI GR+I+L
Sbjct: 891 QENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKHISKIEGRQIIL 950

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RDSNRFHHF DG+CSC D+W
Sbjct: 951 RDSNRFHHFQDGECSCSDFW 970



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 235/480 (48%), Gaps = 18/480 (3%)

Query: 272 RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
           R   K  H  L ++GL   V + N L+N Y + G    +R VF  M  ++ VSW  ++SG
Sbjct: 17  RGAAKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSG 76

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG--WIMLGQQIHGEGLKLGLD 389
             +NG ++EA++    M ++G+ S++++ +S L +C  L    I+ G+QIHG   KL   
Sbjct: 77  YSRNGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYA 136

Query: 390 SDVSVSNALLSLYAD-AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
            D  VSN L+S+Y    G L   L+ F  +   + VSWNS+I  ++ +      A K + 
Sbjct: 137 VDAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQT-GDQRFAFKMFY 195

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMG--KLGHQVHAQVIKYNVANETTIENALLSCYGK 506
            M+  G  P   TF +++  A S +    +L  Q+   + K     +  + + L+S + K
Sbjct: 196 SMQCDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAK 255

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM-MQRGQRLDHFTFA 565
            G +    KIF +M E R+ V+ N ++ G +  +   +A  L  FM M     +   ++ 
Sbjct: 256 SGSLIHARKIFNQM-ETRNAVTLNGLMVGLVRQKWGEEATKL--FMDMNSMIDVSPESYV 312

Query: 566 TVLS-----ACASVATLERGMEVHACGVRACL-EFDVVIGSALVDMYSKCGRIDYASRFF 619
            +LS     + A    L++G EVH   +   L +F V IG+ LV+MY+KCG I  A R F
Sbjct: 313 ILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF 372

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
             M  ++  SWNSMI+G  ++    +A+  +  M+    LP   T +  +S+C+      
Sbjct: 373 CFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAK 432

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
            G +     S   G+   +   + ++ L    G L++  +  + MP   + + W +++GA
Sbjct: 433 LG-QQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMP-EHDQVSWNSIIGA 490



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 120/258 (46%), Gaps = 9/258 (3%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +K  +  H + LK G   +V + N L+ +Y   G L    K+F  MP+ + VSW  I+  
Sbjct: 431 AKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGA 490

Query: 61  YTHKGMS-NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
                 S  EA   F   +RAG  LNR    SVL A         + G Q+H L LK N 
Sbjct: 491 LASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFG--ELGKQIHGLALKYNI 548

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             +    N LIA YG C E   C +      E RD ++WNS+IS Y           L  
Sbjct: 549 ADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVW 608

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            M + G R     + + + ++++ A++SV +    + ++ A   +A L SD+ VGSALV 
Sbjct: 609 FMMQTGQRL----DSFMYATVLS-AFASVATLERGM-EVHACSVRACLESDVVVGSALVD 662

Query: 240 GFARLGNFYYARKIFEQM 257
            +++ G   YA + F  M
Sbjct: 663 MYSKCGRLDYALRFFNTM 680


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score = 1115 bits (2885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 537/756 (71%), Positives = 621/756 (82%), Gaps = 43/756 (5%)

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------- 271
           V K G  SDL++ + L++ + R+G+   ARK+F++M  +N V+   L+ G          
Sbjct: 26  VLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDA 85

Query: 272 --------------------------------RRKGKEVHGYLIRSGLFDM-VAVGNGLV 298
                                           RRKG++VHGY IR+GL D  VAVGNGL+
Sbjct: 86  CGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLI 145

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
           NMYAKCG ID +RSVF  M+ KDSVSWN+MI+GLDQN C+E+A+ ++ +MR+ GLM SNF
Sbjct: 146 NMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNF 205

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           +LIS LSSCASLG I+LGQQ HGEG+KLGLD DVSVSN LL+LYA+   L+ C KVF  M
Sbjct: 206 ALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWM 265

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
            E DQVSWN+VIGA ADS A VSEA++ +L+M RAGWSPN VTFIN+LA  SS S  KL 
Sbjct: 266 LERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLS 325

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
           HQ+HA ++KYNV ++  IENALL+CYGK GEM++CE+IF+RMSERRDEVSWNSMISGYIH
Sbjct: 326 HQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIH 385

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
           NELL KAM+LVW MMQRGQRLD FTFATVLSACA+VATLE GMEVHAC +RACLE DVVI
Sbjct: 386 NELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVI 445

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
           GSALVDMYSKCGRIDYASRFF+LMPVRN+YSWNSMISGYARHGHGD AL LF++MKL G 
Sbjct: 446 GSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQ 505

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
           LPDH+TFVGVLSACSH GLVDEGF++FKSM++VYGL+P++E +SCMVDLLGRAGELDKIE
Sbjct: 506 LPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIE 565

Query: 719 EFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYAS 778
            FINKMPI PN LIWRTVLGACCR N RKTELGR+AA MLF M+PQNAVNYVLL+NMYAS
Sbjct: 566 NFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYAS 625

Query: 779 GGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQK 838
           GGKWED+A+ R+AM+EA VKKEAGCSWVTMKDGVHVFVAGD SHPEK LIY KLKEL++K
Sbjct: 626 GGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKK 685

Query: 839 MRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKLPIRIMKNLRVCGDCH 898
           +RDAGYVPQ KFAL+DLEPE+KE+L+SYHSEK+AVAFVLTRNS LPIRIMKNLRVCGDCH
Sbjct: 686 IRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAFVLTRNSGLPIRIMKNLRVCGDCH 745

Query: 899 SAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           SAFK+ISK+V R IVLRDSNRFHHF DGKCSC DYW
Sbjct: 746 SAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781



 Score =  283 bits (723), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 185/577 (32%), Positives = 293/577 (50%), Gaps = 56/577 (9%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           DA LFHL +LKHGF  D+FLCNTLINVYVR+GD  SA KLFDEMPDRN V+WAC++SGYT
Sbjct: 18  DANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYT 77

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             GM  +AC + KEM+  GFL NR+A GS +RACQE      K G QVH   +++     
Sbjct: 78  QNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRK-GRQVHGYAIRTGLNDA 136

Query: 123 GL-VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
            + V N LI MY  C +  D AR +F  +  +D +SWNS+I+   Q        K ++ M
Sbjct: 137 KVAVGNGLINMYAKCGD-IDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSM 195

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL-QQILAMVKKAGLLSDLYVGSALVSG 240
           ++ G    L P+ +   +LI+A  S    G  LL QQ      K GL  D+ V + L++ 
Sbjct: 196 RKTG----LMPSNF---ALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLAL 248

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGL------------------MEGRRKG------- 275
           +A        +K+F  M++++ VS N +                  +E  R G       
Sbjct: 249 YAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVT 308

Query: 276 -----------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF-RFM 317
                             ++H  +++  + D  A+ N L+  Y K G +++   +F R  
Sbjct: 309 FINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMS 368

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             +D VSWN+MISG   N    +A+     M + G     F+  + LS+CA++  +  G 
Sbjct: 369 ERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGM 428

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           ++H   ++  L+SDV + +AL+ +Y+  G +    + F LMP  +  SWNS+I  +A   
Sbjct: 429 EVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYA-RH 487

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTI 496
                A++ +  M+ +G  P+ +TF+ +L+A S   +   G +    + + Y +      
Sbjct: 488 GHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEH 547

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            + ++   G+ GE+D  E    +M  + + + W +++
Sbjct: 548 YSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVL 584



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 134/260 (51%), Gaps = 5/260 (1%)

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H  V+K+   ++  + N L++ Y + G+     K+F  M +R + V+W  +ISGY  N +
Sbjct: 23  HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDR-NGVTWACLISGYTQNGM 81

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACA-SVATLERGMEVHACGVRACL-EFDVVIG 599
              A  ++  M+  G   + F F + + AC  S+    +G +VH   +R  L +  V +G
Sbjct: 82  PEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVG 141

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           + L++MY+KCG ID+A   F LM  ++  SWNSMI+G  ++   + A+  ++ M+  G +
Sbjct: 142 NGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLM 201

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           P +   +  LS+C+  G +  G +      ++ GL   +   + ++ L      L + ++
Sbjct: 202 PSNFALISALSSCASLGCILLGQQTHGEGIKL-GLDMDVSVSNTLLALYAETSRLAECQK 260

Query: 720 FINKMPITPNSLIWRTVLGA 739
             + M +  + + W TV+GA
Sbjct: 261 VFSWM-LERDQVSWNTVIGA 279


>gi|224121748|ref|XP_002330643.1| predicted protein [Populus trichocarpa]
 gi|222872247|gb|EEF09378.1| predicted protein [Populus trichocarpa]
          Length = 777

 Score = 1061 bits (2744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/767 (67%), Positives = 605/767 (78%), Gaps = 45/767 (5%)

Query: 46  MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFK 105
           MPDRN V+WAC++SGYT  GM ++AC + KEM+  GFL NR+A GS +RACQE    G +
Sbjct: 1   MPDRNGVTWACLISGYTQNGMPDDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLCGLQ 60

Query: 106 FGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY 165
            GMQ+H L+LKS    D  + NVLI+MYG  L   D AR +F+EIE R+ I WNSI+SVY
Sbjct: 61  LGMQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVY 120

Query: 166 SQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKA 225
           SQRGD  S F+LFS MQ      SLKPNEYTFGSLITAA SSV SG  LL QILA +KK+
Sbjct: 121 SQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGLSLLGQILARIKKS 180

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM---------------- 269
           GLL++LYVGSAL  GF+RLG+F YARKIFEQM  +N VSMNGLM                
Sbjct: 181 GLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEVF 240

Query: 270 ----------------------------EGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNM 300
                                       EGRRKG+EVHGY IR+GL D  VAVGNGL+NM
Sbjct: 241 KETRHLVDINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLINM 300

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           YAKCG ID +RSVF  M+ KDSVSWN+MI+GLDQN C+E+A+ ++ +MR+ GLM SNF+L
Sbjct: 301 YAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFTL 360

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           IS LSSCASLG I+LGQQ HGEG+KLGLD DVSVSN LL+LYA+ G+L+ C KVF  M E
Sbjct: 361 ISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWMLE 420

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            DQVSWN+VIGA ADS A VSEA++ +L+M RAGWSPN VTFIN+LA  SS S  KL HQ
Sbjct: 421 RDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQ 480

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +HA ++KYNV ++  IENALL+CYGK GEM++CE+IF+RMSERRDEVSWNSMISGYIHN+
Sbjct: 481 IHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHND 540

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
           LL KAM+LVW MMQRGQRLD FTFATVLSACA+VATLERGMEVHAC +RACLE DVVIGS
Sbjct: 541 LLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVHACAIRACLESDVVIGS 600

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           ALVDMYSKCGRIDYASRFF+LMP+RN+YSWNSMISGYARHG+GD AL LF++MKL G LP
Sbjct: 601 ALVDMYSKCGRIDYASRFFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRMKLSGQLP 660

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           DH+TFVGVLSACSH GLVDEGF++FKSM++VYGL+P++E +SCMVDLLGRAGELDKI+ F
Sbjct: 661 DHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIDNF 720

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAV 767
           INKMPI PN LIWRTVLGACCR N RKTELGR+AA MLF M+PQNAV
Sbjct: 721 INKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAV 767



 Score =  255 bits (651), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 211/700 (30%), Positives = 341/700 (48%), Gaps = 76/700 (10%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVR-VGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
            H  ILK  +A D  LCN LI++Y + +G +  A  +FDE+  RNS+ W  IVS Y+ +G
Sbjct: 65  IHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVYSQRG 124

Query: 66  MSNEACKMFK--EMVRAGFLL--NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
            +    ++F   +M  +G  L  N Y  GS++ A      SG     Q+   + KS    
Sbjct: 125 DAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGLSLLGQILARIKKS---- 180

Query: 122 DGLVSNVLI--AMYG--SCLESTDCARRIFEEIETRDLISWNSI-ISVYSQR--GDTISV 174
            GL++N+ +  A+ G  S L S D AR+IFE++  R+ +S N + + +  Q+   + + V
Sbjct: 181 -GLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEV 239

Query: 175 FKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLL-SDL 231
           FK          R+ +  N  ++  L++A     L   G    +++     + GL  + +
Sbjct: 240 FK--------ETRHLVDINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKV 291

Query: 232 YVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG----------------RRK- 274
            VG+ L++ +A+ G+  +AR +F  M+ K+ VS N ++ G                 RK 
Sbjct: 292 AVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKT 351

Query: 275 ------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDS 310
                                   G++ HG  I+ GL   V+V N L+ +YA+ G + + 
Sbjct: 352 GLMPSNFTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAEC 411

Query: 311 RSVFRFMIGKDSVSWNTMISGL-DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           + VF +M+ +D VSWNT+I  L D      EAI  F  M R G   +  + I+ L++ +S
Sbjct: 412 QKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSS 471

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE-HDQVSWNS 428
           L    L  QIH   LK  +  D ++ NALL+ Y  +G +  C ++F  M E  D+VSWNS
Sbjct: 472 LSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNS 531

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
           +I  +  ++ L       +L M+R G   +  TF  +L+A ++ +  + G +VHA  I+ 
Sbjct: 532 MISGYIHNDLLCKAMDLVWLMMQR-GQRLDCFTFATVLSACATVATLERGMEVHACAIRA 590

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNL 548
            + ++  I +AL+  Y KCG +D   + F  M   R+  SWNSMISGY  +     A+ L
Sbjct: 591 CLESDVVIGSALVDMYSKCGRIDYASRFFNLM-PMRNLYSWNSMISGYARHGYGDNALRL 649

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA-CLEFDVVIGSALVDMYS 607
              M   GQ  DH TF  VLSAC+ +  ++ G E          L   V   S +VD+  
Sbjct: 650 FTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLG 709

Query: 608 KCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKA 646
           + G +D    F + MP++ N+  W +++    R G+G K 
Sbjct: 710 RAGELDKIDNFINKMPIKPNILIWRTVLGACCR-GNGRKT 748



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 8/204 (3%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR-NSVSWACIVS 59
           SK +   H  ILK+    D  + N L+  Y + G++ +  ++F  M +R + VSW  ++S
Sbjct: 475 SKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMIS 534

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           GY H  +  +A  +   M++ G  L+ +   +VL AC        + GM+VH   +++  
Sbjct: 535 GYIHNDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVAT--LERGMEVHACAIRACL 592

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D ++ + L+ MY  C    D A R F  +  R+L SWNS+IS Y++ G   +  +LF+
Sbjct: 593 ESDVVIGSALVDMYSKC-GRIDYASRFFNLMPMRNLYSWNSMISGYARHGYGDNALRLFT 651

Query: 180 RMQREGFRYSLKPNEYTFGSLITA 203
           RM+  G      P+  TF  +++A
Sbjct: 652 RMKLSG----QLPDHITFVGVLSA 671


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score = 1036 bits (2679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 523/978 (53%), Positives = 689/978 (70%), Gaps = 52/978 (5%)

Query: 7    FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
             H++++K G  +D+FLCN L+N Y +   LA+AS++FDEMP+RN+VSW C+VSGY   G+
Sbjct: 83   LHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGI 142

Query: 67   SNEACKMFKEMVR---AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            + EA ++F+ M+R   AG     +  G++LRACQ+ GP    F +QVH LV K+    + 
Sbjct: 143  AEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNT 202

Query: 124  LVSNVLIAMYGSCLESTDC-ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V N LI+MYGSC       A+R+F+    RDLI+WN+++SVY+++GD  S F LF  MQ
Sbjct: 203  TVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQ 262

Query: 183  REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            R   R  L+P E+TFGSLITAA  S  S S +L Q+L  V K+G  SDLYVGSALVS FA
Sbjct: 263  RGDSRIQLRPTEHTFGSLITAASLSSGS-SAVLDQVLVWVLKSGCSSDLYVGSALVSAFA 321

Query: 243  RLGNFYYARKIFEQMIQKNVVSMNGLM--------------------------------- 269
            R G    A+ IF  + QKN V++NGL+                                 
Sbjct: 322  RHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVVL 381

Query: 270  -----------EGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                       EG R G+ VHG+++R+GL D+ +AV NGLVNMYAKCG I+ +  +F+ M
Sbjct: 382  LSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLM 441

Query: 318  IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
               D +SWNT+IS LDQNG  EEA+M++  MR+  +  SNF+LIS+LSSCA L  +  GQ
Sbjct: 442  EATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQ 501

Query: 378  QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
            Q+H + +K GLD D SVSN L+ +Y + G +S   KVF  M EHD+VSWN+++G  A S+
Sbjct: 502  QVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQ 561

Query: 438  ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
              +SE VK + +M R G  PN VTFIN+LAA S  S+ +LG QVHA V+K+ V  +  ++
Sbjct: 562  TPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVD 621

Query: 498  NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ 557
            NAL+SCY K G+M  CE +F  MS+RRD +SWNSMISGYI+N  L +AM+ VW M+  GQ
Sbjct: 622  NALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQ 681

Query: 558  RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
             +D  TF+ +L+ACASVA LERGME+HA G+R+ LE DVV+ SALVDMYSKCGR+DYAS+
Sbjct: 682  IMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASK 741

Query: 618  FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGL 677
             F+ M  RN +SWNSMISGYARHG G KA+ +F +M      PDHVTFV VLSACSHAGL
Sbjct: 742  LFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGL 801

Query: 678  VDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
            V+ G ++F+ M   +G++PQ+E +SC++DLLGRAG++DKI+E+I +MPI PN+LIWRTVL
Sbjct: 802  VERGLEYFEMMPD-HGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVL 860

Query: 738  GACCRA-NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAE 796
             AC ++ +    +LGR+A+ +L E+EPQN VNYVL +N +A+ G WED AKAR AM++A 
Sbjct: 861  VACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWEDTAKARTAMRQAT 920

Query: 797  VKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLE 856
             KKEAG SWVT+ DGVH F+AGD SHP    IYEKL  L Q +R+AGYVP T++AL+DLE
Sbjct: 921  EKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQNIRNAGYVPLTEYALYDLE 980

Query: 857  PESKEDLVSYHSEKIAVAFVLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRD 916
             E+KE+L+SYHSEK+A+AFVLTR+S  PIRIMKNLRVCGDCH AF++IS+++ R+I+LRD
Sbjct: 981  EENKEELLSYHSEKLAIAFVLTRSSSGPIRIMKNLRVCGDCHIAFRYISQMISRQIILRD 1040

Query: 917  SNRFHHFNDGKCSCGDYW 934
            S RFHHF DGKCSCGDYW
Sbjct: 1041 SIRFHHFKDGKCSCGDYW 1058



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 223/478 (46%), Gaps = 54/478 (11%)

Query: 5   KLFHLQILKHGFA-YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           ++ H  +L+ G     + + N L+N+Y + G + SASK+F  M   + +SW  I+S    
Sbjct: 399 RVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQ 458

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   EA   +  M ++    + +AL S L +C   G      G QVHC  +K     D 
Sbjct: 459 NGNCEEAVMHYSLMRQSCISPSNFALISSLSSC--AGLKLLTAGQQVHCDAVKWGLDLDT 516

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTIS-VFKLFSRMQ 182
            VSNVL+ MYG C   +D   ++F  +   D +SWN+++ V +     IS + K+F+ M 
Sbjct: 517 SVSNVLVKMYGECGAMSD-YWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMM 575

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           R G    L PN+ TF +L+ A   S LS   L +Q+ A V K G++ D  V +AL+S +A
Sbjct: 576 RGG----LIPNKVTFINLLAAL--SPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYA 629

Query: 243 RLGNFYYARKIFEQMI-QKNVVSMNGLMEGR----------------------------- 272
           + G+      +F  M  +++ +S N ++ G                              
Sbjct: 630 KSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFS 689

Query: 273 ------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                        +G E+H + IRS L   V V + LV+MY+KCG +D +  +F  M  +
Sbjct: 690 IILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQR 749

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           +  SWN+MISG  ++G   +AI  F  M R      + + +S LS+C+  G +  G +  
Sbjct: 750 NEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYF 809

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSE 437
                 G+   +   + ++ L   AG + +  +    MP E + + W +V+ A   S+
Sbjct: 810 EMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSK 867



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 253/524 (48%), Gaps = 29/524 (5%)

Query: 272 RRKG-----KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
           RR G     + +H  LI+ GL   + + N LVN YAK   +  +  VF  M  +++VSW 
Sbjct: 72  RRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWT 131

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRD---GLMSSNFSLISTLSSCASLGWIMLG--QQIHG 381
            ++SG   +G  EEA   F AM R+   G   ++F+  + L +C   G   LG   Q+HG
Sbjct: 132 CLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHG 191

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCL--KVFFLMPEHDQVSWNSVIGAFADSEAL 439
              K    S+ +V NAL+S+Y         L  +VF   P  D ++WN+++  +A  +  
Sbjct: 192 LVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYA-KKGD 250

Query: 440 VSEAVKYYLDMRRAG----WSPNGVTFINILA-AASSFSMGKLGHQVHAQVIKYNVANET 494
           V+     + DM+R        P   TF +++  A+ S     +  QV   V+K   +++ 
Sbjct: 251 VASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDL 310

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
            + +AL+S + + G  D+ + IF  + ++++ V+ N +I G +  +   +A+ +  F+  
Sbjct: 311 YVGSALVSAFARHGLTDEAKDIFLSL-KQKNAVTLNGLIVGLVRQDFSEEAVKI--FVGT 367

Query: 555 RGQ-RLDHFTFATVLSACASVATLERGME----VHACGVRACL-EFDVVIGSALVDMYSK 608
           R    ++  T+  +LSA A  +  E G+     VH   +R  L +  + + + LV+MY+K
Sbjct: 368 RNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAK 427

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
           CG I+ AS+ F LM   +  SWN++IS   ++G+ ++A+  +S M+     P +   +  
Sbjct: 428 CGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISS 487

Query: 669 LSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITP 728
           LS+C+   L+  G +     +  +GL       + +V + G  G +    +  N M    
Sbjct: 488 LSSCAGLKLLTAG-QQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMA-EH 545

Query: 729 NSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLL 772
           + + W T++G    +    +E+ +   NM+      N V ++ L
Sbjct: 546 DEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINL 589


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score = 1025 bits (2651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/978 (52%), Positives = 684/978 (69%), Gaps = 52/978 (5%)

Query: 7    FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
             HL+++K G  +D+FL N L+N Y +   L +A ++FD MP RN+VSW C++SG+   G+
Sbjct: 87   LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146

Query: 67   SNEACKMFKEMVR--AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
              +A  +F+ M+R   G     +  GSVLRACQ+ GP    F +QVH LV K+  T +  
Sbjct: 147  PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTT 206

Query: 125  VSNVLIAMYGSC-LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V N LI+MYGSC +     A+R+F+    RDLI+WN+++SVY++RGD I  F LF  MQ 
Sbjct: 207  VCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQY 266

Query: 184  EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            +     L+P E+TFGSLITA Y S  S   LL Q+   V K+G  SDLYVGSALVS FAR
Sbjct: 267  DDSGIELRPTEHTFGSLITATYLSSCSLG-LLDQLFVRVLKSGCSSDLYVGSALVSAFAR 325

Query: 244  LGNFYYARKIFEQMIQKNVVSMNGLM---------------------------------- 269
             G    A+ I+  + ++N V++NGL+                                  
Sbjct: 326  HGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLL 385

Query: 270  ----------EGRRKGKEVHGYLIRSG-LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                      +G RKG+EVH +++R+G ++  +AV NGLVNMYAKCG ID +  VF+ M 
Sbjct: 386  SAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLME 445

Query: 319  GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
             +D +SWNT+I+ LDQNG  E A+MN+C MR++ +  SNF+ IS LSSCA LG +  GQQ
Sbjct: 446  ARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQ 505

Query: 379  IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
            +H + +K GL  D SVSNAL+ +Y + G +S C ++F  M  HD VSWNS++G  A S+A
Sbjct: 506  LHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQA 565

Query: 439  LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
             ++E+V+ + +M ++G  PN VTF+N LAA +  S+ +LG Q+H+ ++K+ V  +  ++N
Sbjct: 566  PITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDN 625

Query: 499  ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
            AL+SCY K G++D CE++F+RMS RRD +SWNSMISGYI+N  L +AM+ V  MM   Q 
Sbjct: 626  ALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQM 685

Query: 559  LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
            +DH TF+ VL+ACASVA LERGME+HA G+R+ LE DVV+ SALVDMYSKCGRIDYAS+ 
Sbjct: 686  MDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKV 745

Query: 619  FDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLV 678
            F  M  +N +SWNSMISGYARHG G KAL +F +M+  G  PDHVTFV VLSACSHAGLV
Sbjct: 746  FHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLV 805

Query: 679  DEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
            + G  +F+ M   YG++P++E +SC++DLLGRAGELDKI+E++ +MP+ PN+LIWRTVL 
Sbjct: 806  ERGLDYFELMED-YGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLV 864

Query: 739  ACCRANCR-KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEV 797
            AC ++  R K +LG +A+ ML E+EPQN VNYVL +  +A+ G+WED AKAR AMK A V
Sbjct: 865  ACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAV 924

Query: 798  KKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEP 857
            KKEAG SWVT+ DGVH F+AGD SHP    IYEKL  L QK+R+AGYVP T++ L DLE 
Sbjct: 925  KKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGYVPLTEYVLHDLEE 984

Query: 858  ESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRD 916
            E+KE+L+ YHSEK+AVAFVLTR+S   PIRIMKNLRVCGDCH+AF++IS+IVGR+I+LRD
Sbjct: 985  ENKEELLRYHSEKLAVAFVLTRSSSGGPIRIMKNLRVCGDCHTAFRYISQIVGRQIILRD 1044

Query: 917  SNRFHHFNDGKCSCGDYW 934
            S RFHHF DGKCSCGDYW
Sbjct: 1045 SIRFHHFKDGKCSCGDYW 1062



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 151/529 (28%), Positives = 266/529 (50%), Gaps = 36/529 (6%)

Query: 268 LMEGRRKG-----KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
           L+ GRR G     + +H  +++ GL   + + N LVN YAK   +D +R VF  M G+++
Sbjct: 72  LLRGRRPGCDASPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNA 131

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRD--GLMSSNFSLISTLSSCASLGWIMLG--QQ 378
           VSW  +ISG   +G  E+A   F AM R+  G   ++F+  S L +C   G   LG   Q
Sbjct: 132 VSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQ 191

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL--KVFFLMPEHDQVSWNSVIGAFADS 436
           +HG   K    S+ +V NAL+S+Y         L  +VF   P  D ++WN+++  +A  
Sbjct: 192 VHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKR 251

Query: 437 EALVSEAVKYYLDMRRAGWSPNGV-------TFINILAAA--SSFSMGKLGHQVHAQVIK 487
                +A+  +   R   +  +G+       TF +++ A   SS S+G L  Q+  +V+K
Sbjct: 252 ----GDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLD-QLFVRVLK 306

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
              +++  + +AL+S + + G +D+ + I+  + E R+ V+ N +I+G +  +    A  
Sbjct: 307 SGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKE-RNAVTLNGLIAGLVKQQHGEAAAE 365

Query: 548 LVWFMMQR-GQRLDHFTFATVLSACASVATLERGM----EVHACGVRACLEF-DVVIGSA 601
           +  FM  R    ++  T+  +LSA A  +T E+G+    EVHA  +RA   +  + + + 
Sbjct: 366 I--FMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNG 423

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           LV+MY+KCG ID A R F LM  R+  SWN++I+   ++G+ + A+  +  M+ +   P 
Sbjct: 424 LVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPS 483

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
           +   +  LS+C+  GL+  G +     +  +GL       + +V + G  G + +  E  
Sbjct: 484 NFAAISGLSSCAGLGLLAAG-QQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIF 542

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
           N M    + + W +++G    +    TE  +  +NM+      N V +V
Sbjct: 543 NSMS-AHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFV 590



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 123/257 (47%), Gaps = 10/257 (3%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD-RNSVSWACIVSGYTH 63
           K  H  +LKHG   D  + N L++ Y + GD+ S  +LF  M   R+++SW  ++SGY +
Sbjct: 606 KQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIY 665

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   EA      M+ +  +++      VL AC     +  + GM++H   L+S+   D 
Sbjct: 666 NGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASV--AALERGMEMHAFGLRSHLESDV 723

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +V + L+ MY  C    D A ++F  +  ++  SWNS+IS Y++ G      ++F  MQ 
Sbjct: 724 VVESALVDMYSKC-GRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQE 782

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G      P+  TF S+++A   + L    L      +++  G+L  +   S ++    R
Sbjct: 783 SG----ESPDHVTFVSVLSACSHAGLVERGL--DYFELMEDYGILPRIEHYSCVIDLLGR 836

Query: 244 LGNFYYARKIFEQMIQK 260
            G     ++  ++M  K
Sbjct: 837 AGELDKIQEYMKRMPMK 853


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score = 1014 bits (2623), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/980 (53%), Positives = 693/980 (70%), Gaps = 55/980 (5%)

Query: 7    FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
             HL+++K G  +D+FL N L+N+Y +   LA+A ++FD M +RN+VSW C+VSGY   G+
Sbjct: 78   LHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGI 137

Query: 67   SNEACKMFKEMVRAGFLLNR---YALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            ++EA ++FK M+  G   +R   +  GSVLRACQ+ GP    F +QVH LV K+    + 
Sbjct: 138  TDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNT 197

Query: 124  LVSNVLIAMYGSCLESTDC-ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V N LI+MYG+C       A+++F+    RDLI+WN+++SVY+++G  +S F LF  M 
Sbjct: 198  TVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAML 257

Query: 183  REGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             +     L+PNE+TFGSLITA + SS  SG  +L Q+ A V K+G  SDLYVGSALVS F
Sbjct: 258  HDDSAIELRPNEHTFGSLITATSLSSCSSG--VLDQVFARVLKSGSSSDLYVGSALVSAF 315

Query: 242  ARLGNFYYARKIFEQMIQKNVVSMNGLM-------------------------------- 269
            AR G    A+ IF  + ++N V++NGL+                                
Sbjct: 316  ARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNTDTFVV 375

Query: 270  ------------EGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRF 316
                        +G  +G+EVHG+++R+GL D+ +A+ NGLVNMYAKCG ID +  VFR 
Sbjct: 376  LLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRL 435

Query: 317  MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
            +  +D VSWNT+IS LDQNG  E A+MN+C MR+  +  SNF+ IS LSSCASL  +  G
Sbjct: 436  LCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAG 495

Query: 377  QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
            QQ+H + +K GLD D SVSNAL+ +Y D G  S   ++F  M EHD VSWNS++G    S
Sbjct: 496  QQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSS 555

Query: 437  EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
             A  +E+V+ + +M R+G +PN VTF+N+L+A S  S+ +LG QVHA V+K+    +  +
Sbjct: 556  HAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAV 615

Query: 497  ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
            +NAL+SCY K G+MD CE++F+ MS RRD VSWNSMISGYI+N  L + M+ VW MM   
Sbjct: 616  DNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSN 675

Query: 557  QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
            Q LD  TF+ VL+ACASVA LERGME+HA G+R+ LE DVV+ SAL+DMYSKCGRIDYAS
Sbjct: 676  QMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYAS 735

Query: 617  RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
            + F+ M  +N +SWNSMISGYARHG G+KAL +F +M+ +G  PDHVTFV VLSACSHAG
Sbjct: 736  KVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAG 795

Query: 677  LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
            LVD G  +F+ M   +G++P +E +SC++DLLGRAG+L KI+E+IN+MP+ PN+LIWRTV
Sbjct: 796  LVDRGLDYFEMMED-HGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTV 854

Query: 737  LGACCRA-NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
            L AC ++ +  + +LG++A+ ML E+EPQN VNYVL +N YA+ G+WED AKAR AM  A
Sbjct: 855  LVACRQSKDGDRIDLGKEASRMLLELEPQNPVNYVLASNFYAATGRWEDTAKARAAMGGA 914

Query: 796  EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
             +KKEAG SWVT+ DGVH F+AGD SHP    IYEKL  L QK+++AGYVP T+FAL+DL
Sbjct: 915  AMKKEAGQSWVTLGDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIKNAGYVPMTEFALYDL 974

Query: 856  EPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
            E E+KE+L+SYHSEK+AVAFVLTR+S  +PIRIMKNLRVCGDCH+AF++IS+IV R+I+L
Sbjct: 975  EEENKEELLSYHSEKLAVAFVLTRSSSDVPIRIMKNLRVCGDCHTAFRYISQIVCRQIIL 1034

Query: 915  RDSNRFHHFNDGKCSCGDYW 934
            RDS RFHHF DGKCSCGDYW
Sbjct: 1035 RDSIRFHHFEDGKCSCGDYW 1054



 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 256/523 (48%), Gaps = 29/523 (5%)

Query: 273 RKGKE-----VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
           R+G+E     +H  L++ GL   + + N LVN+YAK   +  +R VF  M+ +++VSW  
Sbjct: 68  RRGEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTC 127

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDG---LMSSNFSLISTLSSCASLGWIML--GQQIHGE 382
           ++SG   +G  +EA   F AM  +G      + F+  S L +C   G  +L    Q+HG 
Sbjct: 128 LVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGL 187

Query: 383 GLKLGLDSDVSVSNALLSLYAD--AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
             K    S+ +V NAL+S+Y +   G   +  +VF   P  D ++WN+++  +A    +V
Sbjct: 188 VSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVV 247

Query: 441 SEAVKYYL---DMRRAGWSPNGVTFINILAAA--SSFSMGKLGHQVHAQVIKYNVANETT 495
           S    +     D       PN  TF +++ A   SS S G L  QV A+V+K   +++  
Sbjct: 248 STFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLD-QVFARVLKSGSSSDLY 306

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           + +AL+S + + G +D+ + IF  + E R+ V+ N +I G +      +A+ +  FM  R
Sbjct: 307 VGSALVSAFARHGMLDEAKDIFINLKE-RNAVTLNGLIVGLVKQHCSEEAVGI--FMGTR 363

Query: 556 GQ-RLDHFTFATVLSACASVATLE----RGMEVHACGVRACL-EFDVVIGSALVDMYSKC 609
               ++  TF  +LSA A  +  E    RG EVH   +R  L +  + + + LV+MY+KC
Sbjct: 364 DSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKC 423

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
           G ID ASR F L+  R+  SWN++IS   ++G  + A+  +  M+     P +   +  L
Sbjct: 424 GAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGL 483

Query: 670 SACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPN 729
           S+C+   L+  G +     +  +GL       + +V + G  G   +  E  N M    +
Sbjct: 484 SSCASLRLLTAG-QQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMA-EHD 541

Query: 730 SLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLL 772
            + W +++G    ++    E     +NM+      N V +V L
Sbjct: 542 IVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNL 584



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 10/257 (3%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD-RNSVSWACIVSGYTH 63
           K  H  +LKHG   D  + N L++ Y + GD+ S  +LF  M   R++VSW  ++SGY +
Sbjct: 598 KQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIY 657

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   E       M+ +  +L+      VL AC     +  + GM++H   ++S    D 
Sbjct: 658 NGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASV--AALERGMEMHAFGIRSQLESDV 715

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +V + L+ MY  C    D A ++F  +  ++  SWNS+IS Y++ G      ++F  MQR
Sbjct: 716 VVESALLDMYSKC-GRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQR 774

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G      P+  TF S+++A   + L    L      M++  G+L  +   S ++    R
Sbjct: 775 NG----ACPDHVTFVSVLSACSHAGLVDRGL--DYFEMMEDHGILPHIEHYSCVIDLLGR 828

Query: 244 LGNFYYARKIFEQMIQK 260
            G     ++   +M  K
Sbjct: 829 AGKLLKIQEYINRMPMK 845


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  998 bits (2581), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/654 (72%), Positives = 565/654 (86%), Gaps = 4/654 (0%)

Query: 271 GRRKGKEVHGYLIRSGLFD-MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
           G +KG+EVHG++I +GL D MV +GNGLVNMYAKCG+I D+R VF FM+ KDSVSWN+MI
Sbjct: 48  GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMI 107

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
           +GLDQNGC+ EA+  + +MRR  ++  +F+LIS+LSSCASL W  LGQQIHGE LKLG+D
Sbjct: 108 TGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID 167

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
            +VSVSNAL++LYA+ GYL+ C K+F  MPEHDQVSWNS+IGA A SE  + EAV  +L+
Sbjct: 168 LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLN 227

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
             RAG   N +TF ++L+A SS S G+LG Q+H   +KYN+A+E T ENAL++CYGKCGE
Sbjct: 228 ALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGE 287

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           MD CEKIF+RMSERRD+V+WNSMISGYIHNELL KA++LVWFM+Q GQRLD F +ATVLS
Sbjct: 288 MDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLS 347

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           A ASVATLERGMEVHAC VRACLE DVV+GSALVDMYSKCGR+DYA RFF+ MPVRN YS
Sbjct: 348 AFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS 407

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           WNSMISGYARHG G++AL LF+ MKLDG   PDHVTFVGVLSACSHAGL++EGFKHF+SM
Sbjct: 408 WNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESM 467

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT 748
           S  YGL P++E FSCM DLLGRAGELDK+E+FI+KMP+ PN LIWRTVLGACCRAN RK 
Sbjct: 468 SDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKA 527

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
           ELG+KAA MLF++EP+NAVNYVLL NMYA+GG+WED+ KARK MK+A+VKKEAG SWVTM
Sbjct: 528 ELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTM 587

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
           KDGVH+FVAGD+SHP+ D+IY+KLKELN+KMRDAGYVPQT FAL+DLE E+KE+++SYHS
Sbjct: 588 KDGVHMFVAGDKSHPDTDVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHS 647

Query: 869 EKIAVAFVLT--RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRF 920
           EK+AVAFVL   R+S LPIRIMKNLRVCGDCHSAFK+ISKI GR+I+LRDSNR+
Sbjct: 648 EKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRY 701



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 226/520 (43%), Gaps = 63/520 (12%)

Query: 2   KDAKLFHLQILKHGFA-YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           K  +  H  ++  G   + V + N L+N+Y + G +A A ++F  M +++SVSW  +++G
Sbjct: 50  KKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITG 109

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
               G   EA + ++ M R   L   + L S L +C     +  K G Q+H   LK    
Sbjct: 110 LDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWA--KLGQQIHGESLKLGID 167

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY--SQRGDTISVFKLF 178
            +  VSN L+ +Y       +C R+IF  +   D +SWNSII     S+R    +V    
Sbjct: 168 LNVSVSNALMTLYAETGYLNEC-RKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFL 226

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           +       R   K N  TF S+++A  S       L +QI  +  K  +  +    +AL+
Sbjct: 227 N-----ALRAGQKLNRITFSSVLSAVSSLSF--GELGKQIHGLALKYNIADEATTENALI 279

Query: 239 SGFARLGNFYYARKIFEQMIQ-KNVVSMNGLMEGR------------------------- 272
           + + + G      KIF +M + ++ V+ N ++ G                          
Sbjct: 280 ACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDS 339

Query: 273 ----------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                            +G EVH   +R+ L   V VG+ LV+MY+KCG +D +   F  
Sbjct: 340 FMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNT 399

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIML 375
           M  ++S SWN+MISG  ++G  EEA+  F  M+ DG    +  + +  LS+C+  G +  
Sbjct: 400 MPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEE 459

Query: 376 GQQIHGEGL--KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV-SWNSVIGA 432
           G + H E +    GL   +   + +  L   AG L +       MP    V  W +V+GA
Sbjct: 460 GFK-HFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGA 518

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFI---NILAAA 469
              +    +E  K   +M       N V ++   N+ AA 
Sbjct: 519 CCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAG 558



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 127/272 (46%), Gaps = 9/272 (3%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +K  +  H + LK G   +V + N L+ +Y   G L    K+F  MP+ + VSW  I+  
Sbjct: 151 AKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGA 210

Query: 61  YTHKGMS-NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
                 S  EA   F   +RAG  LNR    SVL A         + G Q+H L LK N 
Sbjct: 211 LASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFG--ELGKQIHGLALKYNI 268

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             +    N LIA YG C E   C +      E RD ++WNS+IS Y           L  
Sbjct: 269 ADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVW 328

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            M + G R     + + + ++++ A++SV +    + ++ A   +A L SD+ VGSALV 
Sbjct: 329 FMLQTGQRL----DSFMYATVLS-AFASVATLERGM-EVHACSVRACLESDVVVGSALVD 382

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
            +++ G   YA + F  M  +N  S N ++ G
Sbjct: 383 MYSKCGRLDYALRFFNTMPVRNSYSWNSMISG 414


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  943 bits (2437), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/820 (59%), Positives = 595/820 (72%), Gaps = 88/820 (10%)

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
           TF SLI     S  S     +++     K G + +L++ + L++ + R+G+   A+K+F+
Sbjct: 101 TFESLINRYQGSCCSEE--ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFD 158

Query: 256 QMIQKNVVSMNGLMEGRRK----------------------------------------- 274
           +M  +N+V+   L+ G  +                                         
Sbjct: 159 EMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGC 218

Query: 275 --GKEVHGYLIRSGLFDMVAVGNGLVNMYAKC-GTIDDSRSVFRFMIGKDSVSWNTMISG 331
             G ++HG + ++     V V N L++MY  C  + +D+RSVF  +  ++S+SWN++IS 
Sbjct: 219 KLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISV 278

Query: 332 LDQNGCYEEAIMNFCAMRRDGL-----MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
             + G    A   F +M+++GL      +  FS  S L      G     +++H   ++ 
Sbjct: 279 YSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKG-----REVHAHVIRT 333

Query: 387 GL-DSDVSVSNALLSLYADAGYLSRCLKVF------------------------------ 415
           GL D+ V++ N L+++YA +G ++    VF                              
Sbjct: 334 GLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEM 393

Query: 416 -FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
             LMPE+DQVSWNSVIGA +DSEA VS+AVKY+L M R GW  + VTFINIL+A SS S+
Sbjct: 394 FSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSL 453

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            ++ HQ+HA V+KY ++++T I NALLSCYGKCGEM++CEKIFARMSE RDEVSWNSMIS
Sbjct: 454 HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMIS 513

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           GYIHNELL KAM+LVWFMMQ+GQRLD FTFAT+LSACASVATLERGMEVHACG+RACLE 
Sbjct: 514 GYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLES 573

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           DVV+GSALVDMYSKCGRIDYASRFF+LMP+RNVYSWNSMISGYARHGHG+KAL LF++M 
Sbjct: 574 DVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMM 633

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
           LDG  PDHVTFVGVLSACSH G V+EGF+HFKSMS+VY L P++E FSCMVDLLGRAG+L
Sbjct: 634 LDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKL 693

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
           D++ +FIN MP+ PN LIWRTVLGACCRAN R TELGR+AA ML E+EPQNAVNYVLLAN
Sbjct: 694 DEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLAN 753

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           MYASG KWEDVAKAR AMKEA VKKEAGCSWVTMKDGVHVFVAGD+ HPEKDLIY+KL+E
Sbjct: 754 MYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRE 813

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKLPIRIMKNLRVC 894
           LN+KMRDAGY+PQTK+ALFDLE E+KE+L+SYHSEKIAVAFVLTR S LPIRIMKNLRVC
Sbjct: 814 LNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLTRQSALPIRIMKNLRVC 873

Query: 895 GDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           GDCHSAF +ISKIVGR+IVLRDSNRFHHF DGKCSCGDYW
Sbjct: 874 GDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913



 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 253/645 (39%), Positives = 366/645 (56%), Gaps = 44/645 (6%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S++A+  HLQ +K+GF  ++FL NTLIN+YVR+GDL SA KLFDEM +RN V+WAC++SG
Sbjct: 115 SEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISG 174

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           YT  G  +EAC  F++MVRAGF+ N YA GS LRACQE GPSG K G+Q+H L+ K+   
Sbjct: 175 YTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 234

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D +V NVLI+MYGSCL+S + AR +F+ I  R+ ISWNSIISVYS+RGD +S + LFS 
Sbjct: 235 SDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSS 294

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD-LYVGSALVS 239
           MQ+EG  +S KPN+        + +S +  G    +++ A V + GL  + + +G+ LV+
Sbjct: 295 MQKEGLGFSFKPND------AFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVN 348

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVN 299
            +A+ G    A  +FE M++K+ VS N L+ G  +                         
Sbjct: 349 MYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQN------------------------ 384

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL-DQNGCYEEAIMNFCAMRRDGLMSSNF 358
              +C   +D+  +F  M   D VSWN++I  L D      +A+  F  M R G   S  
Sbjct: 385 ---ECS--EDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRV 439

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           + I+ LS+ +SL    +  QIH   LK  L  D ++ NALLS Y   G ++ C K+F  M
Sbjct: 440 TFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARM 499

Query: 419 PE-HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
            E  D+VSWNS+I  +  +E L+ +A+     M + G   +  TF  IL+A +S +  + 
Sbjct: 500 SETRDEVSWNSMISGYIHNE-LLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLER 558

Query: 478 GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI 537
           G +VHA  I+  + ++  + +AL+  Y KCG +D   + F  M   R+  SWNSMISGY 
Sbjct: 559 GMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMP-LRNVYSWNSMISGYA 617

Query: 538 HNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
            +    KA+ L   MM  GQ  DH TF  VLSAC+ V  +E G E H   +         
Sbjct: 618 RHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFE-HFKSMSEVYRLSPR 676

Query: 598 IG--SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYAR 639
           +   S +VD+  + G++D    F + MP++ NV  W +++    R
Sbjct: 677 VEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCR 721


>gi|255578711|ref|XP_002530214.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530261|gb|EEF32161.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 834

 Score =  883 bits (2282), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/689 (64%), Positives = 530/689 (76%), Gaps = 50/689 (7%)

Query: 46  MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFK 105
           MP+RN V+WAC++SGY + GM  EAC +FK M+  G+L N +A G+ L+ACQ+      K
Sbjct: 1   MPERNCVTWACLISGYNNNGMPKEACGIFKGMILEGYLPNCFAFGAALKACQD-----LK 55

Query: 106 FGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY 165
            GMQ+H L+LKS    D ++SNVLI+MYG+ L S D ARR F+EI+ ++ IS NSIISVY
Sbjct: 56  LGMQIHGLILKSPNANDVVLSNVLISMYGNSLASIDYARRAFDEIKIKNSISCNSIISVY 115

Query: 166 SQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKA 225
           SQRG T   F++FS MQR+   +S KPNEYTFGSLITAA S+V SGS LL+Q+L MV+K+
Sbjct: 116 SQRGYTGDAFQIFSSMQRKHSGFSFKPNEYTFGSLITAAGSAVDSGSQLLEQMLTMVEKS 175

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM---------------- 269
           GLLSD+YVGSALVSGF+R G F YA+KIFEQM  +N VSMN LM                
Sbjct: 176 GLLSDMYVGSALVSGFSRFGLFDYAKKIFEQMGMRNAVSMNSLMVGLVTQKCGEEAAEVF 235

Query: 270 ----------------------------EGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNM 300
                                       EGRRKG+EVHG+ IR+GL D+ VA+GNGL+NM
Sbjct: 236 MEMRNIVNINLDSYVILLSAFTKFTLLEEGRRKGREVHGFAIRTGLNDIKVAIGNGLINM 295

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           YAKCG +DD+RSVFR M  +D+VSWN+MISG DQ+ C+E+A+  +  MRR GLM SNFSL
Sbjct: 296 YAKCGAVDDARSVFRLMNDRDAVSWNSMISGFDQSECFEDAVKCYHKMRRTGLMPSNFSL 355

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           ISTLSSCASLGWIMLGQQ+  EGLKLGLD DVSVSNALL+LYA+ GYL+ C KVF LM +
Sbjct: 356 ISTLSSCASLGWIMLGQQLQSEGLKLGLDLDVSVSNALLALYAETGYLAECRKVFSLMLQ 415

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            DQVS N++IGA A+SE  +SEAV+++L+M RAG + N VTFINILAA SS S   L  Q
Sbjct: 416 FDQVSCNTMIGALANSEVSISEAVEFFLEMMRAGLNLNRVTFINILAAVSSLSQSGLSQQ 475

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +HA ++KYN+ ++  IENALL+CYG+CG+MD CEKIF++MS RRDEVSWNSMISGYIHN+
Sbjct: 476 IHALMLKYNIGDDNAIENALLACYGRCGDMDYCEKIFSKMSNRRDEVSWNSMISGYIHND 535

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
            LPKAM+LVW MMQ GQRLD F  AT+LSACASVATLERGME HAC +RA L FDVV+GS
Sbjct: 536 FLPKAMDLVWIMMQSGQRLDTFILATILSACASVATLERGMEAHACSIRAYLNFDVVVGS 595

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           ALVDMYSKCGRIDYASRFF+ MP+RN+YSWNSMISGYARHG GD AL LF+QMKLDG LP
Sbjct: 596 ALVDMYSKCGRIDYASRFFESMPLRNLYSWNSMISGYARHGRGDVALQLFTQMKLDGQLP 655

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           DHVTFVGVLSACSH GLVDEGFKHFKSM+
Sbjct: 656 DHVTFVGVLSACSHVGLVDEGFKHFKSMT 684



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 187/638 (29%), Positives = 307/638 (48%), Gaps = 68/638 (10%)

Query: 2   KDAKL---FHLQILKHGFAYDVFLCNTLINVYVR-VGDLASASKLFDEMPDRNSVSWACI 57
           +D KL    H  ILK   A DV L N LI++Y   +  +  A + FDE+  +NS+S   I
Sbjct: 52  QDLKLGMQIHGLILKSPNANDVVLSNVLISMYGNSLASIDYARRAFDEIKIKNSISCNSI 111

Query: 58  VSGYTHKGMSNEACKMFKEMVRA----GFLLNRYALGSVLRACQECGPSGFKFGMQVHCL 113
           +S Y+ +G + +A ++F  M R      F  N Y  GS++ A      SG +   Q+  +
Sbjct: 112 ISVYSQRGYTGDAFQIFSSMQRKHSGFSFKPNEYTFGSLITAAGSAVDSGSQLLEQMLTM 171

Query: 114 VLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSI-ISVYSQR-GDT 171
           V KS    D  V + L++ + S     D A++IFE++  R+ +S NS+ + + +Q+ G+ 
Sbjct: 172 VEKSGLLSDMYVGSALVSGF-SRFGLFDYAKKIFEQMGMRNAVSMNSLMVGLVTQKCGEE 230

Query: 172 ISVFKLFSRMQREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLS 229
            +  ++F  M     R  +  N  ++  L++A   ++ +  G    +++     + G L+
Sbjct: 231 AA--EVFMEM-----RNIVNINLDSYVILLSAFTKFTLLEEGRRKGREVHGFAIRTG-LN 282

Query: 230 DLYV--GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------------- 271
           D+ V  G+ L++ +A+ G    AR +F  M  ++ VS N ++ G                
Sbjct: 283 DIKVAIGNGLINMYAKCGAVDDARSVFRLMNDRDAVSWNSMISGFDQSECFEDAVKCYHK 342

Query: 272 -RRK------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
            RR                         G+++    ++ GL   V+V N L+ +YA+ G 
Sbjct: 343 MRRTGLMPSNFSLISTLSSCASLGWIMLGQQLQSEGLKLGLDLDVSVSNALLALYAETGY 402

Query: 307 IDDSRSVFRFMIGKDSVSWNTMISGL-DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
           + + R VF  M+  D VS NTMI  L +      EA+  F  M R GL  +  + I+ L+
Sbjct: 403 LAECRKVFSLMLQFDQVSCNTMIGALANSEVSISEAVEFFLEMMRAGLNLNRVTFINILA 462

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQV 424
           + +SL    L QQIH   LK  +  D ++ NALL+ Y   G +  C K+F  M    D+V
Sbjct: 463 AVSSLSQSGLSQQIHALMLKYNIGDDNAIENALLACYGRCGDMDYCEKIFSKMSNRRDEV 522

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           SWNS+I  +  ++ L  +A+     M ++G   +      IL+A +S +  + G + HA 
Sbjct: 523 SWNSMISGYIHNDFL-PKAMDLVWIMMQSGQRLDTFILATILSACASVATLERGMEAHAC 581

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
            I+  +  +  + +AL+  Y KCG +D   + F  M   R+  SWNSMISGY  +     
Sbjct: 582 SIRAYLNFDVVVGSALVDMYSKCGRIDYASRFFESM-PLRNLYSWNSMISGYARHGRGDV 640

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
           A+ L   M   GQ  DH TF  VLSAC+ V  ++ G +
Sbjct: 641 ALQLFTQMKLDGQLPDHVTFVGVLSACSHVGLVDEGFK 678



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 141/527 (26%), Positives = 257/527 (48%), Gaps = 32/527 (6%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQK----NVVSMNGLMEG---RRKGKEVHGYLIRSGL 287
           + L+SG+   G    A  IF+ MI +    N  +    ++     + G ++HG +++S  
Sbjct: 10  ACLISGYNNNGMPKEACGIFKGMILEGYLPNCFAFGAALKACQDLKLGMQIHGLILKSPN 69

Query: 288 FDMVAVGNGLVNMYAKC-GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
            + V + N L++MY     +ID +R  F  +  K+S+S N++IS   Q G   +A   F 
Sbjct: 70  ANDVVLSNVLISMYGNSLASIDYARRAFDEIKIKNSISCNSIISVYSQRGYTGDAFQIFS 129

Query: 347 AMRRDGLMSSNF----------SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
           +M+R     S F          SLI+   S    G  +L +Q+     K GL SD+ V +
Sbjct: 130 SMQRK---HSGFSFKPNEYTFGSLITAAGSAVDSGSQLL-EQMLTMVEKSGLLSDMYVGS 185

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           AL+S ++  G      K+F  M   + VS NS++     ++    EA + +++MR    +
Sbjct: 186 ALVSGFSRFGLFDYAKKIFEQMGMRNAVSMNSLMVGLV-TQKCGEEAAEVFMEMRNI-VN 243

Query: 457 PNGVTFINILAAASSFSM----GKLGHQVHAQVIKYNVAN-ETTIENALLSCYGKCGEMD 511
            N  +++ +L+A + F++     + G +VH   I+  + + +  I N L++ Y KCG +D
Sbjct: 244 INLDSYVILLSAFTKFTLLEEGRRKGREVHGFAIRTGLNDIKVAIGNGLINMYAKCGAVD 303

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
           D   +F R+   RD VSWNSMISG+  +E    A+     M + G    +F+  + LS+C
Sbjct: 304 DARSVF-RLMNDRDAVSWNSMISGFDQSECFEDAVKCYHKMRRTGLMPSNFSLISTLSSC 362

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           AS+  +  G ++ + G++  L+ DV + +AL+ +Y++ G +    + F LM   +  S N
Sbjct: 363 ASLGWIMLGQQLQSEGLKLGLDLDVSVSNALLALYAETGYLAECRKVFSLMLQFDQVSCN 422

Query: 632 SMISGYARHGHG-DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           +MI   A       +A+  F +M   G   + VTF+ +L+A S         +   ++  
Sbjct: 423 TMIGALANSEVSISEAVEFFLEMMRAGLNLNRVTFINILAAVSSL-SQSGLSQQIHALML 481

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
            Y +       + ++   GR G++D  E+  +KM    + + W +++
Sbjct: 482 KYNIGDDNAIENALLACYGRCGDMDYCEKIFSKMSNRRDEVSWNSMI 528



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 148/559 (26%), Positives = 260/559 (46%), Gaps = 60/559 (10%)

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M  ++ V+W  +ISG + NG  +EA   F  M  +G + + F+  + L +C  L    LG
Sbjct: 1   MPERNCVTWACLISGYNNNGMPKEACGIFKGMILEGYLPNCFAFGAALKACQDLK---LG 57

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADA-GYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
            QIHG  LK    +DV +SN L+S+Y ++   +    + F  +   + +S NS+I  ++ 
Sbjct: 58  MQIHGLILKSPNANDVVLSNVLISMYGNSLASIDYARRAFDEIKIKNSISCNSIISVYS- 116

Query: 436 SEALVSEAVKYYLDMRR--AGWS--PNGVTFINILAAASSF--SMGKLGHQVHAQVIKYN 489
                 +A + +  M+R  +G+S  PN  TF +++ AA S   S  +L  Q+   V K  
Sbjct: 117 QRGYTGDAFQIFSSMQRKHSGFSFKPNEYTFGSLITAAGSAVDSGSQLLEQMLTMVEKSG 176

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV 549
           + ++  + +AL+S + + G  D  +KIF +M   R+ VS NS++ G +  +   +A   V
Sbjct: 177 LLSDMYVGSALVSGFSRFGLFDYAKKIFEQMG-MRNAVSMNSLMVGLVTQKCGEEAAE-V 234

Query: 550 WFMMQRGQRLDHFTFATVLSACASVATLE----RGMEVHACGVRACL-EFDVVIGSALVD 604
           +  M+    ++  ++  +LSA      LE    +G EVH   +R  L +  V IG+ L++
Sbjct: 235 FMEMRNIVNINLDSYVILLSAFTKFTLLEEGRRKGREVHGFAIRTGLNDIKVAIGNGLIN 294

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
           MY+KCG +D A   F LM  R+  SWNSMISG+ +    + A+  + +M+  G +P + +
Sbjct: 295 MYAKCGAVDDARSVFRLMNDRDAVSWNSMISGFDQSECFEDAVKCYHKMRRTGLMPSNFS 354

Query: 665 FVGVLSACSHAG-------LVDEGFK---------------------HFKSMSQVYGLIP 696
            +  LS+C+  G       L  EG K                     +     +V+ L+ 
Sbjct: 355 LISTLSSCASLGWIMLGQQLQSEGLKLGLDLDVSVSNALLALYAETGYLAECRKVFSLML 414

Query: 697 QLEQFSC--MVDLLGRA--GELDKIEEFINKMP--ITPNSLIWRTVLGACCRANCRKTEL 750
           Q +Q SC  M+  L  +     + +E F+  M   +  N + +  +L A    +      
Sbjct: 415 QFDQVSCNTMIGALANSEVSISEAVEFFLEMMRAGLNLNRVTFINILAAVSSLSQSGLSQ 474

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
              A  + + +   NA+   LL    A  G+  D+    K   +   +++   SW +M  
Sbjct: 475 QIHALMLKYNIGDDNAIENALL----ACYGRCGDMDYCEKIFSKMSNRRDE-VSWNSMIS 529

Query: 811 GVHVFVAGDESHPEKDLIY 829
           G   ++  D      DL++
Sbjct: 530 G---YIHNDFLPKAMDLVW 545


>gi|242057857|ref|XP_002458074.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
 gi|241930049|gb|EES03194.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
          Length = 963

 Score =  816 bits (2107), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/860 (48%), Positives = 564/860 (65%), Gaps = 89/860 (10%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H++++K G  +D+FL N L+N Y +   LA+AS++FDEMP RN+VSW C++SGY  +G+
Sbjct: 82  LHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQGI 141

Query: 67  SNEACKMFKEMVR---AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           + EA ++F+ M+R    G     +  G++LRACQ+ GP    F  QVH L+ K+    + 
Sbjct: 142 TEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYASNT 201

Query: 124 LVSNVLIAMYGSCLESTDC-ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            V N LI+MYGSC       A+R+F+    RDLI+WN+++SVY+++GD +S F LF  MQ
Sbjct: 202 TVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMDMQ 261

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGS-YLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           RE  R  L+P E+TFGSLITA  +S+ SGS  +L Q+   V K+G  SDLYVGSALVS F
Sbjct: 262 REDSRIQLRPTEHTFGSLITA--TSLSSGSSAVLDQVFVSVLKSGCSSDLYVGSALVSAF 319

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLM-------------------------------- 269
           AR G    A+ IF  + +KN V++NGL+                                
Sbjct: 320 ARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTRNTIVVNADTYVV 379

Query: 270 ------------EGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRF 316
                       EG RKGKE HG+++R+GL D+ +AV NGLVNMYAKCG ID +  +F+ 
Sbjct: 380 LLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKIFQL 439

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M   D +SWNT+IS LDQNG                       L+S             G
Sbjct: 440 MEATDRISWNTIISALDQNG---------------------LKLLSA------------G 466

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           QQ+H + +K GLD D SVSN L+ +Y + G +S C KVF  M +HD+VSWNS++G  A S
Sbjct: 467 QQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEVSWNSMMGVMASS 526

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
           +A +SE V+ + +M R G  PN VTF+N+LAA S  S+ +LG Q HA V+K+ V ++  +
Sbjct: 527 QAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELGKQFHAAVLKHGVMDDNVV 586

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
           +NAL+SCY K G+M+ CE +F+ MS RRD VSWNSMISGYI+N  L +AM+ VW M+  G
Sbjct: 587 DNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISGYIYNGYLQEAMDCVWLMLHSG 646

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
           Q +D  TF+ +L+ACASVA LERGME+HA G+R+ LE DVV+ SALVDMYSKCGR+DYAS
Sbjct: 647 QIMDCCTFSIILNACASVAALERGMEMHAFGIRSHLESDVVVESALVDMYSKCGRVDYAS 706

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
           + F+ M  RN +SWNSMISGYARHG G KAL  F +M      PDHVTFV VLSACSHAG
Sbjct: 707 KLFNSMTQRNEFSWNSMISGYARHGLGRKALETFEEMLRSRESPDHVTFVSVLSACSHAG 766

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
           LV+ G ++F+ M   +G++PQ+E +SC++DLLGRAG++DKI+E+I +MP+ PN+LIWRTV
Sbjct: 767 LVERGLEYFEMMPD-HGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPMKPNALIWRTV 825

Query: 737 LGACCRA-NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           L AC ++ +  K ELGR+A  +L E+EPQN VNYVL +N +A+ G WED AKAR  M++A
Sbjct: 826 LVACRQSKDGSKIELGREALRVLLEIEPQNPVNYVLASNFHAATGMWEDTAKARAGMRQA 885

Query: 796 EVKKEAGCSWVTMKDGVHVF 815
            VKKEAG SW  +  G+ +F
Sbjct: 886 TVKKEAGRSWTYL--GIQIF 903



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 133/499 (26%), Positives = 219/499 (43%), Gaps = 92/499 (18%)

Query: 2   KDAKLFHLQILKHGFA-YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +  K  H  +L+ G     + + N L+N+Y + G + SASK+F  M   + +SW  I+S 
Sbjct: 395 RKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKIFQLMEATDRISWNTIISA 454

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
               G+                         +L A           G QVHC  +K    
Sbjct: 455 LDQNGL------------------------KLLSA-----------GQQVHCDAVKWGLD 479

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTIS-VFKLFS 179
            D  VSNVL+ MYG C   +DC  ++F  +   D +SWNS++ V +     IS   ++F+
Sbjct: 480 LDTSVSNVLVKMYGECGAMSDCW-KVFNSMADHDEVSWNSMMGVMASSQAPISETVEVFN 538

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            M R G    L PN+ TF +L+ A   S LS   L +Q  A V K G++ D  V +AL+S
Sbjct: 539 NMMRGG----LIPNKVTFVNLLAAL--SPLSVLELGKQFHAAVLKHGVMDDNVVDNALIS 592

Query: 240 GFARLGNFYYARKIFEQMI-QKNVVSMNGLMEGR-------------------------- 272
            +A+ G+      +F  M  +++ VS N ++ G                           
Sbjct: 593 CYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISGYIYNGYLQEAMDCVWLMLHSGQIMDCC 652

Query: 273 ---------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                           +G E+H + IRS L   V V + LV+MY+KCG +D +  +F  M
Sbjct: 653 TFSIILNACASVAALERGMEMHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSM 712

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             ++  SWN+MISG  ++G   +A+  F  M R      + + +S LS+C+  G +  G 
Sbjct: 713 TQRNEFSWNSMISGYARHGLGRKALETFEEMLRSRESPDHVTFVSVLSACSHAGLVERGL 772

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADS 436
           +        G+   +   + ++ L   AG + +  +    MP + + + W +V+ A   S
Sbjct: 773 EYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPMKPNALIWRTVLVACRQS 832

Query: 437 E-----ALVSEAVKYYLDM 450
           +      L  EA++  L++
Sbjct: 833 KDGSKIELGREALRVLLEI 851



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 198/394 (50%), Gaps = 28/394 (7%)

Query: 272 RRKG------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
           RR+G      + +H  LI+ GL   + + N LVN YAK   +  +  VF  M  +++VSW
Sbjct: 70  RRRGDAANSPENLHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSW 129

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRD---GLMSSNFSLISTLSSCASLGWIMLG--QQIH 380
             ++SG    G  EEA   F AM R+   G   ++F+  + L +C   G   LG   Q+H
Sbjct: 130 TCLLSGYVLQGITEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVH 189

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCL--KVFFLMPEHDQVSWNSVIGAFADSEA 438
           G   K    S+ +V NAL+S+Y         L  +VF   P  D ++WN+++  +A    
Sbjct: 190 GLLSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGD 249

Query: 439 LVSEAVKYYLDMRRAG----WSPNGVTFINILAAAS-SFSMGKLGHQVHAQVIKYNVANE 493
           +VS     ++DM+R        P   TF +++ A S S     +  QV   V+K   +++
Sbjct: 250 VVS-TFTLFMDMQREDSRIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVSVLKSGCSSD 308

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM 553
             + +AL+S + + G +D+ + IF  + E+ + V+ N +I G +      +A+ +  F+ 
Sbjct: 309 LYVGSALVSAFARHGLIDEAKDIFLSLKEK-NAVTLNGLIVGLVKQHCSEEAVKI--FVG 365

Query: 554 QRGQ-RLDHFTFATVLSACASVATLERGM----EVHACGVRACL-EFDVVIGSALVDMYS 607
            R    ++  T+  +LSA A  +  E G+    E H   +R  L +  + + + LV+MY+
Sbjct: 366 TRNTIVVNADTYVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYA 425

Query: 608 KCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           KCG ID AS+ F LM   +  SWN++IS   ++G
Sbjct: 426 KCGAIDSASKIFQLMEATDRISWNTIISALDQNG 459


>gi|218188563|gb|EEC70990.1| hypothetical protein OsI_02646 [Oryza sativa Indica Group]
          Length = 952

 Score =  662 bits (1709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/707 (47%), Positives = 462/707 (65%), Gaps = 49/707 (6%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            HL+I+K G  +D+FL N L+N Y +   L +A  +FD MP RN+VSW C++SG+   G+
Sbjct: 86  LHLEIVKRGLTHDLFLANHLVNSYAKGARLDAARGVFDGMPSRNAVSWTCLISGHVLSGL 145

Query: 67  SNEACKMFKEMVR--AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
             +A  +F+ M+R   G     +  GSVLRACQ+ GP    F +QVH LV K+  T +  
Sbjct: 146 PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTT 205

Query: 125 VSNVLIAMYGSC-LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           V N LI+MYGSC +     A+R+F+    RDLI+WN+++SVY+++GD I  F LF  MQ 
Sbjct: 206 VCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKKGDAICTFTLFRAMQY 265

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           +     L+P E+TFGSLITA Y S  S   LL Q+   V K+G  SDLYVGSALVS FAR
Sbjct: 266 DDSGIELRPTEHTFGSLITATYLSSCSLG-LLDQLFVRVLKSGCSSDLYVGSALVSAFAR 324

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLM---------------------------------- 269
            G    A+ I+  + ++N V++NGL+                                  
Sbjct: 325 HGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLL 384

Query: 270 ----------EGRRKGKEVHGYLIRSG-LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                     +G RKG+EVH +++R+G ++  +AV NGLVNMYAKCG I  +  VF+ M 
Sbjct: 385 SAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIGKACRVFQLME 444

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            +D +SWNT+I+ LDQNG  E A+MN+C MR++ +  SNF+ IS LSSCA LG +  GQQ
Sbjct: 445 ARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQ 504

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           +H + +K GL  D S+SNAL+ +Y + G +S C ++F  M  HD VSWNS++G  A S+A
Sbjct: 505 LHCDAVKWGLYLDTSISNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQA 564

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
            ++E+V+ + +M ++G  PN VTF+N LAA +  S+ +LG Q+H+ ++K+ V  +  ++N
Sbjct: 565 PITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDN 624

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
           AL+SCY K G++D CE++F+RMS RRD +SWNSMISGYI+N  L +AM+ VW MM   Q 
Sbjct: 625 ALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVWLMMLSEQM 684

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
           +DH TF+ VL+ACASVA LERGME+HA G+R+ LE DVV+ SALVDMYSKCGRIDYAS+ 
Sbjct: 685 MDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKV 744

Query: 619 FDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
           F  M  +N +SWNSMISGYARHG G KAL +F +M+  G  PDHVTF
Sbjct: 745 FHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTF 791



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 264/529 (49%), Gaps = 36/529 (6%)

Query: 268 LMEGRRKG-----KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
           L+ GRR G     + +H  +++ GL   + + N LVN YAK   +D +R VF  M  +++
Sbjct: 71  LLRGRRPGCDASPESLHLEIVKRGLTHDLFLANHLVNSYAKGARLDAARGVFDGMPSRNA 130

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRD--GLMSSNFSLISTLSSCASLGWIMLG--QQ 378
           VSW  +ISG   +G  E+A   F AM R+  G   ++F+  S L +C   G   LG   Q
Sbjct: 131 VSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQ 190

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL--KVFFLMPEHDQVSWNSVIGAFADS 436
           +HG   K    S+ +V NAL+S+Y         L  +VF   P  D ++WN+++  +A  
Sbjct: 191 VHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKK 250

Query: 437 EALVSEAVKYYLDMRRAGWSPNGV-------TFINILAAA--SSFSMGKLGHQVHAQVIK 487
                +A+  +   R   +  +G+       TF +++ A   SS S+G L  Q+  +V+K
Sbjct: 251 ----GDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLD-QLFVRVLK 305

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
              +++  + +AL+S + + G +D+ + I+  + E R+ V+ N +I+G +  +    A  
Sbjct: 306 SGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKE-RNAVTLNGLIAGLVKQQHGEAAAE 364

Query: 548 LVWFMMQR-GQRLDHFTFATVLSACASVATLERGM----EVHACGVRACLEF-DVVIGSA 601
           +  FM  R    ++  T+  +LSA A  +T E+G+    EVHA  +RA   +  + + + 
Sbjct: 365 I--FMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNG 422

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           LV+MY+KCG I  A R F LM  R+  SWN++I+   ++G+ + A+  +  M+ +   P 
Sbjct: 423 LVNMYAKCGAIGKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPS 482

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
           +   +  LS+C+  GL+  G +     +  +GL       + +V + G  G + +  E  
Sbjct: 483 NFAAISGLSSCAGLGLLAAG-QQLHCDAVKWGLYLDTSISNALVKMYGECGRMSECWEIF 541

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
           N M    + + W +++G    +    TE  +  +NM+      N V +V
Sbjct: 542 NSMS-AHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFV 589



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 8/194 (4%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD-RNSVSWACIVSGYTH 63
           K  H  +LKHG   D  + N L++ Y + GD+ S  +LF  M   R+++SW  ++SGY +
Sbjct: 605 KQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIY 664

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   EA      M+ +  +++      VL AC     +  + GM++H   L+S+   D 
Sbjct: 665 NGHLQEAMDCVWLMMLSEQMMDHCTFSIVLNACASV--AALERGMEMHAFGLRSHLESDV 722

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +V + L+ MY  C    D A ++F  +  ++  SWNS+IS Y++ G      ++F  MQ 
Sbjct: 723 VVESALVDMYSKC-GRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQE 781

Query: 184 EGFRYSLKPNEYTF 197
            G      P+  TF
Sbjct: 782 SG----ESPDHVTF 791


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  645 bits (1665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/978 (37%), Positives = 547/978 (55%), Gaps = 64/978 (6%)

Query: 4    AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            AK  H+ I+K G   ++++ N L+ VY+R G L  A ++FD++  +N   W  ++ GY  
Sbjct: 137  AKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAE 196

Query: 64   KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
             G + +A +++ +M +     N     S+L+AC  C P   K+G ++H  +++S    D 
Sbjct: 197  YGHAEDAMRVYDKMRQECGQPNEITYLSILKAC--CCPVNLKWGKKIHAHIIQSGFQSDV 254

Query: 124  LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
             V   L+ MY  C  S + A+ IF+++  R++ISW  +I   +  G     F LF +MQR
Sbjct: 255  RVETALVNMYVKC-GSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQR 313

Query: 184  EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            EGF     PN YT+ S++ A  S+       ++++ +    AGL  DL VG+ALV  +A+
Sbjct: 314  EGF----IPNSYTYVSILNANASA--GALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK 367

Query: 244  LGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRKG----------- 275
             G+   AR +F+ M ++++ S   ++ G                 +R G           
Sbjct: 368  SGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSI 427

Query: 276  ---------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                           K VH +   +G    + +GN L++MYAKCG+IDD+R VF  M  +
Sbjct: 428  LNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDR 487

Query: 321  DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM---SSNFSLISTLSSCASLGWIMLGQ 377
            D +SWN M+ GL QNGC  EA   F  M+++GL+   ++  SL++T  S  +L W+    
Sbjct: 488  DVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWV---N 544

Query: 378  QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
            ++H   ++ GL SD  V +A + +Y   G +     +F  +      +WN++IG  A  +
Sbjct: 545  EVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGG-AAQQ 603

Query: 438  ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
                EA+  +L M+R G+ P+  TFINIL+A       +   +VH+      +  +  + 
Sbjct: 604  RCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLV-DLRVG 662

Query: 498  NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ 557
            NAL+  Y KCG +   +++F  M ER +  +W  MI G   +     A +    M++ G 
Sbjct: 663  NALVHTYSKCGNVKYAKQVFDDMVER-NVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGI 721

Query: 558  RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
              D  T+ ++LSACAS   LE   EVH   V A L  D+ +G+ALV MY+KCG ID A  
Sbjct: 722  VPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARS 781

Query: 618  FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGL 677
             FD M  R+V+SW  MI G A+HG G +AL  F +MK +G  P+  ++V VL+ACSHAGL
Sbjct: 782  VFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGL 841

Query: 678  VDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
            VDEG + F SM+Q YG+ P +E ++CMVDLLGRAG L++ E FI  MPI P+   W  +L
Sbjct: 842  VDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALL 901

Query: 738  GACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEV 797
            GAC        E+   AA    +++P++A  YVLL+N+YA+ GKWE     R  M+   +
Sbjct: 902  GACVTYG--NLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGI 959

Query: 798  KKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEP 857
            +KE G SW+ + + +H FV GD SHPE   IY +L +L ++++  GYVP T+  L + + 
Sbjct: 960  RKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQ 1019

Query: 858  ESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRD 916
            E KE  +  HSEK+A+ + ++   SK PIR+ KNLRVC DCH+A KFISKI GREIV RD
Sbjct: 1020 EHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHTATKFISKITGREIVARD 1079

Query: 917  SNRFHHFNDGKCSCGDYW 934
            + RFHHF DG CSCGDYW
Sbjct: 1080 AKRFHHFKDGVCSCGDYW 1097



 Score =  292 bits (747), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 194/695 (27%), Positives = 331/695 (47%), Gaps = 67/695 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  I++ GF  DV +   L+N+YV+ G +  A  +FD+M +RN +SW  ++ G 
Sbjct: 236 KWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGL 295

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
            H G   EA  +F +M R GF+ N Y   S+L A    G    ++  +VH   + +    
Sbjct: 296 AHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAG--ALEWVKEVHSHAVNAGLAL 353

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V N L+ MY     S D AR +F+ +  RD+ SW  +I   +Q G     F LF +M
Sbjct: 354 DLRVGNALVHMYAKS-GSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQM 412

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           QR G      PN  T+ S++ A+  +  S    ++ +    ++AG +SDL +G+AL+  +
Sbjct: 413 QRNG----CLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMY 468

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRKG--------- 275
           A+ G+   AR +F+ M  ++V+S N +M G                 +++G         
Sbjct: 469 AKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYL 528

Query: 276 ---------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                           EVH + + +GL     VG+  ++MY +CG+IDD+R +F  +  +
Sbjct: 529 SLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVR 588

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA---SLGWIMLGQ 377
              +WN MI G  Q  C  EA+  F  M+R+G +    + I+ LS+     +L W+   +
Sbjct: 589 HVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWV---K 645

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           ++H      GL  D+ V NAL+  Y+  G +    +VF  M E +  +W  +IG  A   
Sbjct: 646 EVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLA-QH 703

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
               +A  ++L M R G  P+  T+++IL+A +S    +   +VH   +   + ++  + 
Sbjct: 704 GCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVG 763

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ 557
           NAL+  Y KCG +DD   +F  M E RD  SW  MI G   +    +A++    M   G 
Sbjct: 764 NALVHMYAKCGSIDDARSVFDDMVE-RDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGF 822

Query: 558 RLDHFTFATVLSACASVATLERGME-----VHACGVRACLEFDVVIGSALVDMYSKCGRI 612
           + + +++  VL+AC+    ++ G           G+   +E      + +VD+  + G +
Sbjct: 823 KPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEH----YTCMVDLLGRAGLL 878

Query: 613 DYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKA 646
           + A  F   MP+  +   W +++     +G+ + A
Sbjct: 879 EEAELFILNMPIEPDDAPWGALLGACVTYGNLEMA 913



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 232/451 (51%), Gaps = 13/451 (2%)

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
           + G+   +FS ++ L  C     I+L +Q+H   +K G++ ++ V+N LL +Y   G L 
Sbjct: 111 QQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQ 170

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
              +VF  + + +   W ++IG +A+      +A++ Y  MR+    PN +T+++IL A 
Sbjct: 171 CARQVFDKLLKKNIYIWTTMIGGYAEY-GHAEDAMRVYDKMRQECGQPNEITYLSILKAC 229

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
                 K G ++HA +I+    ++  +E AL++ Y KCG ++D + IF +M E R+ +SW
Sbjct: 230 CCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVE-RNVISW 288

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
             MI G  H     +A +L   M + G   + +T+ ++L+A AS   LE   EVH+  V 
Sbjct: 289 TVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVN 348

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
           A L  D+ +G+ALV MY+K G ID A   FD M  R+++SW  MI G A+HG G +A +L
Sbjct: 349 AGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSL 408

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVD-EGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           F QM+ +G LP+  T++ +L+A + A     E  K     ++  G I  L   + ++ + 
Sbjct: 409 FLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMY 468

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ---- 764
            + G +D      + M    + + W  ++G   +  C     G +A  +  +M+ +    
Sbjct: 469 AKCGSIDDARLVFDGM-CDRDVISWNAMMGGLAQNGC-----GHEAFTVFLQMQQEGLVP 522

Query: 765 NAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           ++  Y+ L N + S    E V +  K   E 
Sbjct: 523 DSTTYLSLLNTHGSTDALEWVNEVHKHAVET 553



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 129/262 (49%), Gaps = 34/262 (12%)

Query: 538 HNELLPK-AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
           HN +  K A+ ++   +Q+G  +D F++  +L  C     +    +VH C +++ +E ++
Sbjct: 94  HNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNL 153

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
            + + L+ +Y +CGR+  A + FD +  +N+Y W +MI GYA +GH + A+ ++ +M+ +
Sbjct: 154 YVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQE 213

Query: 657 GPLPDHVTFVGVLSACS-----------HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
              P+ +T++ +L AC            HA ++  GF+              +   + +V
Sbjct: 214 CGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQ------------SDVRVETALV 261

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ- 764
           ++  + G ++  +   +KM +  N + W  ++G            G++A ++  +M+ + 
Sbjct: 262 NMYVKCGSIEDAQLIFDKM-VERNVISWTVMIGGLAHYG-----RGQEAFHLFLQMQREG 315

Query: 765 ---NAVNYVLLANMYASGGKWE 783
              N+  YV + N  AS G  E
Sbjct: 316 FIPNSYTYVSILNANASAGALE 337


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  640 bits (1650), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 352/974 (36%), Positives = 549/974 (56%), Gaps = 54/974 (5%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           DAK  H +I K GF  +  L + LI++Y+  G++ +A KLFD++P  N   W  ++SG  
Sbjct: 28  DAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLL 87

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            K ++++   +F  M+      +     SVLRAC   G + F+   Q+H  ++       
Sbjct: 88  AKKLASQVLGLFSLMITENVTPDESTFASVLRACSG-GKAPFQVTEQIHAKIIHHGFGSS 146

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            LV N LI +Y S     D A+ +FE +  +D +SW ++IS  SQ G       LF +M 
Sbjct: 147 PLVCNPLIDLY-SKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMH 205

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           +     ++ P  Y F S+++A     L    L +Q+   + K GL S+ +V +ALV+ ++
Sbjct: 206 KS----AVIPTPYVFSSVLSACTKIELFK--LGEQLHGFIVKWGLSSETFVCNALVTLYS 259

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRR----------------------------- 273
           R GN   A +IF +M +++ +S N L+ G                               
Sbjct: 260 RWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVAS 319

Query: 274 ------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                       KGK++H Y+I+ G+   + +   L+++Y KC  I+ +   F     ++
Sbjct: 320 LLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETEN 379

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            V WN M+    Q G   E+   F  M+ +GLM + ++  S L +C SLG + LG+QIH 
Sbjct: 380 VVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHT 439

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
           + +K G   +V V + L+ +YA  G L     +   + E D VSW ++I  +   + L +
Sbjct: 440 QVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHD-LFA 498

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           EA+K + +M   G   + + F + ++A +       G Q+HAQ      + + +I NAL+
Sbjct: 499 EALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALV 558

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
           S Y +CG   D    F ++ + +D +SWN++ISG+  +    +A+ +   M Q G   + 
Sbjct: 559 SLYARCGRAQDAYLAFEKI-DAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANL 617

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
           FTF + +SA A+ A +++G ++HA  ++   + +    + L+ +YSKCG I+ A R F  
Sbjct: 618 FTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFE 677

Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           MP +NV SWN+MI+GY++HG+G +A++LF +MK  G +P+HVTFVGVLSACSH GLV+EG
Sbjct: 678 MPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEG 737

Query: 682 FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACC 741
             +F+SMS+ +GL+P+ E + C+VDLLGRA  L    EFI +MPI P+++IWRT+L AC 
Sbjct: 738 LSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACT 797

Query: 742 RANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA 801
               +  E+G  AA  L E+EP+++  YVLL+NMYA  GKW+   + R+ MK+  VKKE 
Sbjct: 798 VH--KNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEP 855

Query: 802 GCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKE 861
           G SW+ +K+ +H F  GD  HP  + IYE + +LN++  + GYV      L D+E E K+
Sbjct: 856 GRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKD 915

Query: 862 DLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRF 920
                HSEK+AVAF +L+  + +PIR++KNLRVC DCH+  KF+SKI  R IV+RD+ RF
Sbjct: 916 PTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRF 975

Query: 921 HHFNDGKCSCGDYW 934
           HHF  G CSC DYW
Sbjct: 976 HHFEGGVCSCKDYW 989



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 257/519 (49%), Gaps = 20/519 (3%)

Query: 255 EQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
           E+ I+ NV +   L EG          K++H  + +SG      +G+ L+++Y   G +D
Sbjct: 3   ERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVD 62

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
           ++  +F  +   +   WN +ISGL       + +  F  M  + +     +  S L +C+
Sbjct: 63  NAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACS 122

Query: 369 -SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
                  + +QIH + +  G  S   V N L+ LY+  G++     VF  +   D VSW 
Sbjct: 123 GGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWV 182

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           ++I   + +     EA+  +  M ++   P    F ++L+A +   + KLG Q+H  ++K
Sbjct: 183 AMISGLSQN-GREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVK 241

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
           + +++ET + NAL++ Y + G +   E+IF++M  RRD +S+NS+ISG        +A+ 
Sbjct: 242 WGLSSETFVCNALVTLYSRWGNLIAAEQIFSKM-HRRDRISYNSLISGLAQRGFSDRALQ 300

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
           L   M     + D  T A++LSACASV    +G ++H+  ++  +  D++I  +L+D+Y 
Sbjct: 301 LFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYV 360

Query: 608 KCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVG 667
           KC  I+ A  +F      NV  WN M+  Y + G+  ++  +F QM+++G +P+  T+  
Sbjct: 361 KCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPS 420

Query: 668 VLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC--MVDLLGRAGELDKIEEFINKMP 725
           +L  C+  G +D G    +  +QV     Q   + C  ++D+  + GELD     + ++ 
Sbjct: 421 ILRTCTSLGALDLG---EQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR 477

Query: 726 ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ 764
              + + W  ++     A   + +L  +A  +  EME Q
Sbjct: 478 -EEDVVSWTAMI-----AGYTQHDLFAEALKLFQEMENQ 510



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 241/532 (45%), Gaps = 57/532 (10%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M   G+ ++  + +     C + G ++  +++H    K G D +  + + L+ +Y   G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +   +K+F  +P  +   WN VI     ++ L S+ +  +  M     +P+  TF ++L 
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLL-AKKLASQVLGLFSLMITENVTPDESTFASVLR 119

Query: 468 AASSFSMG-KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           A S      ++  Q+HA++I +   +   + N L+  Y K G +D  + +F R+   +D 
Sbjct: 120 ACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLF-LKDS 178

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           VSW +MISG   N    +A+ L   M +       + F++VLSAC  +   + G ++H  
Sbjct: 179 VSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGF 238

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            V+  L  +  + +ALV +YS+ G +  A + F  M  R+  S+NS+ISG A+ G  D+A
Sbjct: 239 IVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRA 298

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAG--------------------------LVDE 680
           L LF +M+LD   PD VT   +LSAC+  G                          L+D 
Sbjct: 299 LQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDL 358

Query: 681 GFKHFK-SMSQVYGLIPQLEQ---FSCMVDLLGRAGELDKIEEFINKMPIT---PNSLIW 733
             K F    +  Y L  + E    ++ M+   G+ G L +      +M I    PN   +
Sbjct: 359 YVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTY 418

Query: 734 RTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV--LLANMYASGGKWEDVAKARKA 791
            ++L  C   +    +LG +    + +   Q  V YV  +L +MYA  G+ +      + 
Sbjct: 419 PSILRTC--TSLGALDLGEQIHTQVIKSGFQFNV-YVCSVLIDMYAKHGELDTARGILQR 475

Query: 792 MKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
           ++E +V      SW  M       +AG   H   DL  E LK L Q+M + G
Sbjct: 476 LREEDV-----VSWTAM-------IAGYTQH---DLFAEALK-LFQEMENQG 511



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 19/171 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  ++K G+  +    N LI +Y + G +  A + F EMP++N VSW  +++GY
Sbjct: 634 KQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGY 693

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQEC-----GPSGFKFGMQVHCLVLK 116
           +  G  +EA  +F+EM + G + N      VL AC        G S F+   + H LV K
Sbjct: 694 SQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPK 753

Query: 117 SNQ---TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR-DLISWNSIIS 163
                   D L    L+           CAR   EE+    D + W +++S
Sbjct: 754 PEHYVCVVDLLGRAALLC----------CAREFIEEMPIEPDAMIWRTLLS 794


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  638 bits (1646), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 354/980 (36%), Positives = 546/980 (55%), Gaps = 66/980 (6%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H +ILK GF  +  LCN L++VY  +GDL    K+F++MP+R+  SW  I+SG+ 
Sbjct: 28  ECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFM 87

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            K MSN    +F  M+         +  SVLRAC      G ++  Q+H  ++       
Sbjct: 88  EKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSG-HRIGIRYAEQIHARIICHGLLCS 146

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            ++SN LI +Y         AR++F+ + T+D +SW ++IS +SQ G       LF  M 
Sbjct: 147 PIISNPLIGLYAKN-GLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMH 205

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL------QQILAMVKKAGLLSDLYVGSA 236
             G    + P  Y F        SSVLSG   +      +Q+ A+V K G   + YV +A
Sbjct: 206 TAG----IFPTPYVF--------SSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNA 253

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RR------ 273
           LV+ ++R+ NF  A K+F +M  K+ VS N L+ G                 +R      
Sbjct: 254 LVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPD 313

Query: 274 ------------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                             KG+++H Y+I++G+   + V   L+++Y  C  I  +  +F 
Sbjct: 314 CVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFL 373

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
               ++ V WN M+    +     E+   F  M+  GL+ + F+  S L +C S+G + L
Sbjct: 374 TAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDL 433

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G+QIH + +K G   +V V + L+ +YA  G L     +   + E D VSW ++I  +A 
Sbjct: 434 GEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQ 493

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
              L +EA+K++ +M   G   + + F + ++A +       G Q+HAQ      + + +
Sbjct: 494 HN-LFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLS 552

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           I NAL+S Y +CG + +    F ++ + +D +SWN +ISG+  +     A+ +   M + 
Sbjct: 553 IGNALVSLYARCGRIKEAYLEFEKI-DAKDSISWNGLISGFAQSGYCEDALKVFAQMNRA 611

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
                 FTF + +SA A++A +++G ++HA  ++   + D+ + +AL+  Y+KCG I+ A
Sbjct: 612 KLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDA 671

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
            R F  MP +N  SWN+MI+GY++HG+G++A+ LF +MK  G +P+HVTFVGVLSACSH 
Sbjct: 672 RREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHV 731

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           GLV +G  +F+SMS+ +GL+P+   ++C+VDL+ RAG L +  +FI +MPI P++ IWRT
Sbjct: 732 GLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRT 791

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           +L AC     +  E+G  AA  L E+EP+++  YVLL+NMYA  GKW+   + R+ M+  
Sbjct: 792 LLSACTVH--KNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNR 849

Query: 796 EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
            VKKE G SW+ +K+ VH F  GD  HP  D IYE L ELN+K  + GY       L D+
Sbjct: 850 GVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQDRYSLLNDV 909

Query: 856 EPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
           E E K+  V  HSEK+A+ F +L+ +  +PI +MKNLRVC DCHS  KF+SKI  R I++
Sbjct: 910 EQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKDCHSWIKFVSKISNRAIIV 969

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RD+ RFHHF  G CSC DYW
Sbjct: 970 RDAYRFHHFEGGICSCKDYW 989



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 236/529 (44%), Gaps = 58/529 (10%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M   G+ ++  + I  L  C + G ++  +++HG+ LKLG  ++  + N L+ +Y   G 
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           L   +KVF  MP     SW+ +I  F + + + +  +  +  M     SP  ++F ++L 
Sbjct: 61  LDGVVKVFEDMPNRSVRSWDKIISGFMEKK-MSNRVLDLFSCMIEENVSPTEISFASVLR 119

Query: 468 AASSFSMG-KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           A S   +G +   Q+HA++I + +     I N L+  Y K G +    K+F  +   +D 
Sbjct: 120 ACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLC-TKDS 178

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           VSW +MISG+  N    +A++L   M   G     + F++VLS C  +   + G ++HA 
Sbjct: 179 VSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHAL 238

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
             +     +  + +ALV +YS+      A + F  M  ++  S+NS+ISG A+ G  D A
Sbjct: 239 VFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGA 298

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK----------------------- 683
           L LF++MK D   PD VT   +LSAC+  G + +G +                       
Sbjct: 299 LELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDL 358

Query: 684 -----HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE---FINKMPI---TPNSLI 732
                  K+  +++ L  Q E       +L   G+LD + E      +M I    PN   
Sbjct: 359 YVNCSDIKTAHEMF-LTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFT 417

Query: 733 WRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV--LLANMYASGGKWEDVAKARK 790
           + ++L  C        +LG +    + +   Q  V YV  +L +MYA  GK +      +
Sbjct: 418 YPSILRTCTSVGA--LDLGEQIHTQVIKTGFQFNV-YVCSVLIDMYAKHGKLDTAHVILR 474

Query: 791 AMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
            + E +V      SW  +  G          + + +L  E LK   + +
Sbjct: 475 TLTEDDV-----VSWTALISG----------YAQHNLFAEALKHFKEML 508



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 54/99 (54%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  I+K GF  D+ + N LI  Y + G +  A + F EMP++N VSW  +++GY
Sbjct: 634 KQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGY 693

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           +  G  NEA  +F++M + G + N      VL AC   G
Sbjct: 694 SQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVG 732


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  635 bits (1637), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 355/922 (38%), Positives = 522/922 (56%), Gaps = 58/922 (6%)

Query: 57  IVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLK 116
           ++ GY   G + +A K++ +M R G   N     S+L+AC  C P   K+G ++H  +++
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKAC--CSPVSLKWGKKIHAHIIQ 58

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
           S    D  V   L+ MY  C  S D A+ IF+++  R++ISW  +I   +  G     F 
Sbjct: 59  SGFQSDVRVETALVNMYVKC-GSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFH 117

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
            F +MQREGF     PN YT+ S++ A  S+       ++++ +    AGL  DL VG+A
Sbjct: 118 RFLQMQREGF----IPNSYTYVSILNANASA--GALEWVKEVHSHAVNAGLALDLRVGNA 171

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRKG---- 275
           LV  +A+ G+   AR +F+ M+++++ S   ++ G                  R G    
Sbjct: 172 LVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPN 231

Query: 276 ----------------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
                                 KEVH +  ++G    + VGN L++MYAKCG+IDD+R V
Sbjct: 232 LTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLV 291

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           F  M  +D +SWN MI GL QNGC  EA   F  M+++G +  + + +S L++  S G  
Sbjct: 292 FDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAW 351

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
              +++H   +++GL SD+ V +A + +Y   G +     +F  +   +  +WN++IG  
Sbjct: 352 EWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGV 411

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE 493
           A  +    EA+  +L MRR G+ P+  TF+NIL+A       +   +VH+  I   +  +
Sbjct: 412 AQQKC-GREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLV-D 469

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM 553
             + NAL+  Y KCG     +++F  M ER +  +W  MISG   +    +A +L   M+
Sbjct: 470 LRVGNALVHMYAKCGNTMYAKQVFDDMVER-NVTTWTVMISGLAQHGCGHEAFSLFLQML 528

Query: 554 QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID 613
           + G   D  T+ ++LSACAS   LE   EVH+  V A L  D+ +G+ALV MY+KCG +D
Sbjct: 529 REGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVD 588

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
            A R FD M  R+VYSW  MI G A+HG G  AL LF +MKL+G  P+  +FV VLSACS
Sbjct: 589 DARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACS 648

Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
           HAGLVDEG + F S++Q YG+ P +E ++CMVDLLGRAG+L++ + FI  MPI P    W
Sbjct: 649 HAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPW 708

Query: 734 RTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMK 793
             +LGAC        E+   AA    +++P++A  YVLL+N+YA+ G WE     R  M+
Sbjct: 709 GALLGACVTYG--NLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQ 766

Query: 794 EAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALF 853
              ++KE G SW+ + + +H FV GD SHPE   IY KLK+L ++++  GYVP T+  L 
Sbjct: 767 RRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLR 826

Query: 854 DLEPESKEDLVSYHSEKIAVAFVLTRNS-KLPIRIMKNLRVCGDCHSAFKFISKIVGREI 912
           + + E KE  +  HSEK+A+ + L     + PIR+ KNLRVC DCH+A KFISK+ GREI
Sbjct: 827 NTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREI 886

Query: 913 VLRDSNRFHHFNDGKCSCGDYW 934
           V RD+ RFHHF DG CSCGDYW
Sbjct: 887 VARDAKRFHHFKDGVCSCGDYW 908



 Score =  296 bits (757), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 197/691 (28%), Positives = 330/691 (47%), Gaps = 67/691 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  I++ GF  DV +   L+N+YV+ G +  A  +FD+M +RN +SW  ++ G 
Sbjct: 47  KWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGL 106

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
            H G   EA   F +M R GF+ N Y   S+L A    G    ++  +VH   + +    
Sbjct: 107 AHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAG--ALEWVKEVHSHAVNAGLAL 164

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V N L+ MY     S D AR +F+ +  RD+ SW  +I   +Q G     F LF +M
Sbjct: 165 DLRVGNALVHMYAKS-GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQM 223

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           +R G      PN  T+ S++ A+  +       ++++     KAG +SDL VG+AL+  +
Sbjct: 224 ERGG----CLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMY 279

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRKG--------- 275
           A+ G+   AR +F+ M  ++V+S N ++ G                 +++G         
Sbjct: 280 AKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYL 339

Query: 276 ---------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                          KEVH + +  GL   + VG+  V+MY +CG+IDD++ +F  +  +
Sbjct: 340 SLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR 399

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA---SLGWIMLGQ 377
           +  +WN MI G+ Q  C  EA+  F  MRR+G      + ++ LS+     +L W+   +
Sbjct: 400 NVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWV---K 456

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           ++H   +  GL  D+ V NAL+ +YA  G      +VF  M E +  +W  +I   A   
Sbjct: 457 EVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLA-QH 514

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
               EA   +L M R G  P+  T+++IL+A +S    +   +VH+  +   + ++  + 
Sbjct: 515 GCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVG 574

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ 557
           NAL+  Y KCG +DD  ++F  M E RD  SW  MI G   +     A++L   M   G 
Sbjct: 575 NALVHMYAKCGSVDDARRVFDDMLE-RDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGF 633

Query: 558 RLDHFTFATVLSACASVATLERGME-----VHACGVRACLEFDVVIGSALVDMYSKCGRI 612
           + + ++F  VLSAC+    ++ G           G+   +E      + +VD+  + G++
Sbjct: 634 KPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHY----TCMVDLLGRAGQL 689

Query: 613 DYASRFFDLMPVR-NVYSWNSMISGYARHGH 642
           + A  F   MP+      W +++     +G+
Sbjct: 690 EEAKHFILNMPIEPGDAPWGALLGACVTYGN 720


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 362/952 (38%), Positives = 543/952 (57%), Gaps = 38/952 (3%)

Query: 5    KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVSGYT 62
            K  H +IL  G   D F+ N LI +Y + G L+SA KLFD  PD  R+ V+W  I+S   
Sbjct: 676  KRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALA 735

Query: 63   -HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQ-ECGPSGFKFGMQVHCLVLKSNQT 120
             H   S++   +F+ + R+     R+ L  V + C     PS  +    +H   +K    
Sbjct: 736  AHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASE---SLHGYAVKIGLQ 792

Query: 121  FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            +D  V+  L+ +Y         AR +F+ +  RD++ WN ++  Y           LFS 
Sbjct: 793  WDVFVAGALVNIYAK-FGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSE 851

Query: 181  MQREGFRYSLKPNEYTFGSL--ITAAYSSVLSGSYLLQQILAMVKKAGLL----SDLYVG 234
              R GFR    P++ T  +L  +     ++L     L+Q  A   K  +     SD+ V 
Sbjct: 852  FHRTGFR----PDDVTLRTLSRVVKCKKNILE----LKQFKAYATKLFMYDDDGSDVIVW 903

Query: 235  SALVSGFARLGNFYYARKIFEQMIQKNV-------VSMNGLMEGR---RKGKEVHGYLIR 284
            +  +S F + G  + A   F  MI   V       V M  ++ G      GK++HG ++R
Sbjct: 904  NKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMR 963

Query: 285  SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
            SGL  +V+VGN L+NMY K G++  +RSVF  M   D +SWNTMISG   +G  E ++  
Sbjct: 964  SGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGM 1023

Query: 345  FCAMRRDGLMSSNFSLISTLSSCASL-GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            F  + RD L+   F++ S L +C+SL G   L  QIH   +K G+  D  VS AL+ +Y+
Sbjct: 1024 FVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYS 1083

Query: 404  DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
              G +     +F      D  SWN+++  +  S     +A++ Y+ M+ +G   + +T +
Sbjct: 1084 KRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDF-PKALRLYILMQESGERSDQITLV 1142

Query: 464  NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
            N   AA      K G Q+HA V+K     +  + + +L  Y KCGEM+   ++F+ +   
Sbjct: 1143 NAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSP 1202

Query: 524  RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
             D+V+W +MISG + N     A+     M     + D +TFAT++ AC+ +  LE+G ++
Sbjct: 1203 -DDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQI 1261

Query: 584  HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
            HA  V+    FD  + ++LVDMY+KCG I+ A   F     R + SWN+MI G A+HG+ 
Sbjct: 1262 HANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNA 1321

Query: 644  DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC 703
             +AL  F  MK  G +PD VTF+GVLSACSH+GLV E +++F SM + YG+ P++E +SC
Sbjct: 1322 KEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSC 1381

Query: 704  MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP 763
            +VD L RAG +++ E+ I+ MP   ++ ++RT+L A CR    + E G++ A  L  +EP
Sbjct: 1382 LVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNA-CRVQVDR-ETGKRVAEKLLALEP 1439

Query: 764  QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHP 823
             ++  YVLL+N+YA+  +WE+VA AR  M++  VKK+ G SWV +K+ VH+FVAGD SH 
Sbjct: 1440 SDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHE 1499

Query: 824  EKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK- 882
            E D+IY K++ + +++R+ GYVP T FAL D+E E KE  + YHSEK+A+A+ L +    
Sbjct: 1500 ETDVIYNKVEYIMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPS 1559

Query: 883  LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
              +R++KNLRVCGDCHSA K+ISK+  REIVLRD+NRFHHF +G CSCGDYW
Sbjct: 1560 TTLRVIKNLRVCGDCHSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 193/661 (29%), Positives = 306/661 (46%), Gaps = 66/661 (9%)

Query: 91   SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
            S+LR  Q    S    G + H  +L S    D  V+N LI MY  C  S   AR++F+  
Sbjct: 661  SILR--QAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKC-GSLSSARKLFDTT 717

Query: 151  E--TRDLISWNSIISVYSQRGDT----ISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA 204
                RDL++WN+I+S  +   D       +F+L  R      R++L P    F   + +A
Sbjct: 718  PDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAP---VFKMCLLSA 774

Query: 205  YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS 264
              S        + +     K GL  D++V  ALV+ +A+ G    AR +F+ M  ++VV 
Sbjct: 775  SPSA------SESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVL 828

Query: 265  MNGLM-----------------EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM-----YA 302
             N +M                 E  R G       +R+ L  +V     ++ +     YA
Sbjct: 829  WNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRT-LSRVVKCKKNILELKQFKAYA 887

Query: 303  -KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
             K    DD         G D + WN  +S   Q G   EA+  F  M    +     + +
Sbjct: 888  TKLFMYDDD--------GSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFV 939

Query: 362  STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
              L+  A L  + LG+QIHG  ++ GLD  VSV N L+++Y  AG +SR   VF  M E 
Sbjct: 940  VMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEV 999

Query: 422  DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG-KLGHQ 480
            D +SWN++I     S  L   +V  ++ + R    P+  T  ++L A SS   G  L  Q
Sbjct: 1000 DLISWNTMISGCTLS-GLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQ 1058

Query: 481  VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
            +HA  +K  V  ++ +  AL+  Y K G+M++ E +F    +  D  SWN+++ GYI + 
Sbjct: 1059 IHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVN-QDGFDLASWNAIMHGYIVSG 1117

Query: 541  LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
              PKA+ L   M + G+R D  T      A   +  L++G ++HA  V+     D+ + S
Sbjct: 1118 DFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTS 1177

Query: 601  ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
             ++DMY KCG ++ A R F  +P  +  +W +MISG   +G  + AL  + QM+L    P
Sbjct: 1178 GVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQP 1237

Query: 661  DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE------QFSCMVDLLGRAGEL 714
            D  TF  ++ ACS    +++G        Q++  I +L         + +VD+  + G +
Sbjct: 1238 DEYTFATLVKACSLLTALEQG-------RQIHANIVKLNCAFDPFVMTSLVDMYAKCGNI 1290

Query: 715  D 715
            +
Sbjct: 1291 E 1291



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 131/265 (49%), Gaps = 10/265 (3%)

Query: 2    KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
            K  K  H  ++K GF  D+F+ + ++++Y++ G++ SA ++F E+P  + V+W  ++SG 
Sbjct: 1155 KQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGC 1214

Query: 62   THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
               G    A   + +M  +    + Y   ++++AC     +  + G Q+H  ++K N  F
Sbjct: 1215 VENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLL--TALEQGRQIHANIVKLNCAF 1272

Query: 122  DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
            D  V   L+ MY  C    D AR +F+   TR + SWN++I   +Q G+     + F  M
Sbjct: 1273 DPFVMTSLVDMYAKCGNIED-ARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYM 1331

Query: 182  QREGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
            +  G    + P+  TF G L   ++S ++S +Y  +   +M K  G+  ++   S LV  
Sbjct: 1332 KSRG----VMPDRVTFIGVLSACSHSGLVSEAY--ENFYSMQKNYGIEPEIEHYSCLVDA 1385

Query: 241  FARLGNFYYARKIFEQMIQKNVVSM 265
             +R G    A K+   M  +   SM
Sbjct: 1386 LSRAGRIEEAEKVISSMPFEASASM 1410



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 160/352 (45%), Gaps = 42/352 (11%)

Query: 4    AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            A   H   +K G   D F+   LI+VY + G +  A  LF      +  SW  I+ GY  
Sbjct: 1056 ATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIV 1115

Query: 64   KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
             G   +A +++  M  +G   ++  L +  +A    G  G K G Q+H +V+K     D 
Sbjct: 1116 SGDFPKALRLYILMQESGERSDQITLVNAAKAAG--GLVGLKQGKQIHAVVVKRGFNLDL 1173

Query: 124  LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
             V++ ++ MY  C E  + ARR+F EI + D ++W ++IS   + G        + +M+ 
Sbjct: 1174 FVTSGVLDMYLKCGE-MESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRL 1232

Query: 184  EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
                  ++P+EYTF +L+ A   S+L+     +QI A + K     D +V ++LV  +A+
Sbjct: 1233 S----KVQPDEYTFATLVKAC--SLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAK 1286

Query: 244  LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
             GN   AR +F++   + + S N ++ G                              A+
Sbjct: 1287 CGNIEDARGLFKRTNTRRIASWNAMIVG-----------------------------LAQ 1317

Query: 304  CGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
             G   ++   F++M    +  D V++  ++S    +G   EA  NF +M+++
Sbjct: 1318 HGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKN 1369



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 5/211 (2%)

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P   + +    AAS  S+GK   + HA+++      +  + N L++ Y KCG +    K+
Sbjct: 657 PQCFSILRQAIAASDLSLGK---RAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKL 713

Query: 517 FARMSE-RRDEVSWNSMISGY-IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           F    +  RD V+WN+++S    H +      +L   + +        T A V   C   
Sbjct: 714 FDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLS 773

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
           A+      +H   V+  L++DV +  ALV++Y+K G I  A   FD M VR+V  WN M+
Sbjct: 774 ASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMM 833

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
             Y       +A+ LFS+    G  PD VT 
Sbjct: 834 KAYVDTCLEYEAMLLFSEFHRTGFRPDDVTL 864



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 89/401 (22%), Positives = 159/401 (39%), Gaps = 39/401 (9%)

Query: 360  LISTLSSCASL-------GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
            LI +L  C S+         + LG++ H   L  G   D  V+N L+++YA  G LS   
Sbjct: 652  LIHSLPQCFSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSAR 711

Query: 413  KVFFLMPE--HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
            K+F   P+   D V+WN+++ A A       +    +  +RR+  S    T   +     
Sbjct: 712  KLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCL 771

Query: 471  SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
              +       +H   +K  +  +  +  AL++ Y K G + +   +F  M+  RD V WN
Sbjct: 772  LSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMA-VRDVVLWN 830

Query: 531  SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
             M+  Y+   L  +AM L     + G R D  T  T+      V   +  +E+      A
Sbjct: 831  VMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRV---VKCKKNILELKQFKAYA 887

Query: 591  CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
               F          MY   G               +V  WN  +S + + G   +A+  F
Sbjct: 888  TKLF----------MYDDDG--------------SDVIVWNKALSRFLQRGEAWEAVDCF 923

Query: 651  SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
              M       D +TFV +L+  +    ++ G K    +    GL   +   +C++++  +
Sbjct: 924  VDMINSRVACDGLTFVVMLTVVAGLNCLELG-KQIHGIVMRSGLDQVVSVGNCLINMYVK 982

Query: 711  AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
            AG + +      +M    + + W T++  C  +   +  +G
Sbjct: 983  AGSVSRARSVFGQMNEV-DLISWNTMISGCTLSGLEECSVG 1022


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  630 bits (1625), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 350/977 (35%), Positives = 550/977 (56%), Gaps = 59/977 (6%)

Query: 2    KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
            ++ K  H QI+K G+  D  + N+L+++Y + GDL  A ++F  +  R+ VS+  ++  Y
Sbjct: 145  ENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLY 204

Query: 62   THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              K    E   +F +M   G   ++    ++L A     PS    G ++H L ++     
Sbjct: 205  AQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTT--PSMLDEGKRIHKLTVEEGLNS 262

Query: 122  DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
            D  V   L+ M   C +  D A++ F+    RD++ +N++I+  +Q G  +  F+ + RM
Sbjct: 263  DIRVGTALVTMCVRCGD-VDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRM 321

Query: 182  QREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
            + +G    +  N  T+ S++ A + S  L    L+    + + + G  SD+ +G+AL+S 
Sbjct: 322  RSDG----VALNRTTYLSILNACSTSKALEAGKLIH---SHISEDGHSSDVQIGNALISM 374

Query: 241  FARLGNFYYARKIFEQMIQKNVVSMNGLMEG--RRK------------------------ 274
            +AR G+   AR++F  M +++++S N ++ G  RR+                        
Sbjct: 375  YARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTF 434

Query: 275  ---------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                           GK +H  ++RSG+     + N L+NMY +CG++ ++++VF     
Sbjct: 435  LHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQA 494

Query: 320  KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
            +D +SWN+MI+G  Q+G YE A   F  M+ + L   N +  S LS C +   + LG+QI
Sbjct: 495  RDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQI 554

Query: 380  HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
            HG   + GL  DV++ NAL+++Y   G L     VF  +   D +SW ++IG  AD +  
Sbjct: 555  HGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCAD-QGE 613

Query: 440  VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
              +A++ +  M+  G+ P   TF +IL   +S +    G +V A ++      +T + NA
Sbjct: 614  DMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNA 673

Query: 500  LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
            L+S Y K G M D  ++F +M  R D VSWN +I+GY  N L   A+   + M ++    
Sbjct: 674  LISAYSKSGSMTDAREVFDKMPSR-DIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVP 732

Query: 560  DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
            + F+F ++L+AC+S + LE G  VHA  V+  L+ DV +G+AL+ MY+KCG    A   F
Sbjct: 733  NKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVF 792

Query: 620  DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
            D +  +NV +WN+MI+ YA+HG   KAL  F+ M+ +G  PD  TF  +LSAC+HAGLV 
Sbjct: 793  DNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVL 852

Query: 680  EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
            EG++ F SM   YG++P +E + C+V LLGRA    + E  IN+MP  P++ +W T+LGA
Sbjct: 853  EGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGA 912

Query: 740  C-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVK 798
            C    N     L   AAN   ++  +N   Y+LL+N+YA+ G+W+DVAK R+ M+   ++
Sbjct: 913  CRIHGN---IALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIR 969

Query: 799  KEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPE 858
            KE G SW+ + + +H F+A D SHPE   IY +LK L+ +M +AGY P T+  L DL   
Sbjct: 970  KEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKA 1029

Query: 859  SKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDS 917
             +E  +  HSE++A+A+ L +     PIRI KNLR+CGDCH+A KFISK+VGREI+ RDS
Sbjct: 1030 HQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDS 1089

Query: 918  NRFHHFNDGKCSCGDYW 934
            NRFH F +GKCSC DYW
Sbjct: 1090 NRFHSFKNGKCSCEDYW 1106



 Score =  366 bits (940), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 227/791 (28%), Positives = 399/791 (50%), Gaps = 56/791 (7%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           +AK  H Q+++     D+FL N LIN+YV+   +  A ++F EMP R+ +SW  ++S Y 
Sbjct: 45  EAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYA 104

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            +G   +A ++F+EM  AGF+ N+    S+L AC    P+  + G ++H  ++K+    D
Sbjct: 105 QQGFKKKAFQLFEEMQNAGFIPNKITYISILTACY--SPAELENGKKIHSQIIKAGYQRD 162

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V N L++MYG C +    AR++F  I  RD++S+N+++ +Y+Q+        LF +M 
Sbjct: 163 PRVQNSLLSMYGKCGDLPR-ARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMS 221

Query: 183 REGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            EG    + P++ T+ +L+ A    S+L      ++I  +  + GL SD+ VG+ALV+  
Sbjct: 222 SEG----ISPDKVTYINLLDAFTTPSMLDEG---KRIHKLTVEEGLNSDIRVGTALVTMC 274

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLM-------------------------------- 269
            R G+   A++ F+    ++VV  N L+                                
Sbjct: 275 VRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYL 334

Query: 270 ---------EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                    +    GK +H ++   G    V +GN L++MYA+CG +  +R +F  M  +
Sbjct: 335 SILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKR 394

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D +SWN +I+G  +     EA+  +  M+ +G+     + +  LS+CA+      G+ IH
Sbjct: 395 DLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIH 454

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
            + L+ G+ S+  ++NAL+++Y   G L     VF      D +SWNS+I   A   +  
Sbjct: 455 EDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYE 514

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
           + A K + +M+     P+ +TF ++L+   +    +LG Q+H ++ +  +  +  + NAL
Sbjct: 515 T-AYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNAL 573

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD 560
           ++ Y +CG + D   +F  + + RD +SW +MI G        KA+ L W M   G R  
Sbjct: 574 INMYIRCGSLQDARNVFHSL-QHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPV 632

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
             TF+++L  C S A L+ G +V A  + +  E D  +G+AL+  YSK G +  A   FD
Sbjct: 633 KSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFD 692

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
            MP R++ SWN +I+GYA++G G  A+    QM+    +P+  +FV +L+ACS    ++E
Sbjct: 693 KMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEE 752

Query: 681 GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC 740
           G K   +      L   +   + ++ +  + G   + +E  + + I  N + W  ++ A 
Sbjct: 753 G-KRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNI-IEKNVVTWNAMINAY 810

Query: 741 CRANCRKTELG 751
            +       LG
Sbjct: 811 AQHGLASKALG 821



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 203/388 (52%), Gaps = 4/388 (1%)

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           + ++ L +C     +   ++IH + ++  +  D+ +SN L+++Y     +    +VF  M
Sbjct: 29  TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
           P  D +SWNS+I  +A  +    +A + + +M+ AG+ PN +T+I+IL A  S +  + G
Sbjct: 89  PRRDVISWNSLISCYA-QQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
            ++H+Q+IK     +  ++N+LLS YGKCG++    ++FA +S  RD VS+N+M+  Y  
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISP-RDVVSYNTMLGLYAQ 206

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
              + + + L   M   G   D  T+  +L A  + + L+ G  +H   V   L  D+ +
Sbjct: 207 KAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRV 266

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
           G+ALV M  +CG +D A + F     R+V  +N++I+  A+HGH  +A   + +M+ DG 
Sbjct: 267 GTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGV 326

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
             +  T++ +L+ACS +  ++ G K   S     G    ++  + ++ +  R G+L K  
Sbjct: 327 ALNRTTYLSILNACSTSKALEAG-KLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAR 385

Query: 719 EFINKMPITPNSLIWRTVLGACCRANCR 746
           E    MP   + + W  ++    R   R
Sbjct: 386 ELFYTMP-KRDLISWNAIIAGYARREDR 412



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 124/258 (48%), Gaps = 9/258 (3%)

Query: 555 RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
           R    +  T+  +L  C     L     +HA  V A +  D+ + + L++MY KC  +  
Sbjct: 21  RPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLD 80

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
           A + F  MP R+V SWNS+IS YA+ G   KA  LF +M+  G +P+ +T++ +L+AC  
Sbjct: 81  AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS 140

Query: 675 AGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI- 732
              ++ G K H + +   Y   P+++  + ++ + G+ G+L +  +      I+P  ++ 
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDPRVQ--NSLLSMYGKCGDLPRARQVF--AGISPRDVVS 196

Query: 733 WRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAM 792
           + T+LG   +    K  LG     M  E    + V Y+ L + + +    ++  +  K  
Sbjct: 197 YNTMLGLYAQKAYVKECLGL-FGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLT 255

Query: 793 KEAEVKKE--AGCSWVTM 808
            E  +  +   G + VTM
Sbjct: 256 VEEGLNSDIRVGTALVTM 273


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 356/980 (36%), Positives = 548/980 (55%), Gaps = 66/980 (6%)

Query: 3    DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
            D    H +ILK GF  +V LC  L+++Y+  GDL  A  +FDEMP R    W  ++  + 
Sbjct: 86   DGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFV 145

Query: 63   HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
               M+     +F+ M++     +      VLR C   G   F    ++H   +       
Sbjct: 146  AGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGG-GDVPFHCVEKIHARTITHGYENS 204

Query: 123  GLVSNVLIAMY--GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
              V N LI +Y     L S   A+++F+ ++ RD +SW +++S  SQ G       LF +
Sbjct: 205  LFVCNPLIDLYFKNGFLNS---AKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQ 261

Query: 181  MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
            M   G    + P  Y F S+++A   + +    + +Q+  +V K G   + YV +ALV+ 
Sbjct: 262  MHTSG----VYPTPYIFSSVLSAC--TKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTL 315

Query: 241  FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------- 274
            ++RLGNF  A ++F  M+Q++ VS N L+ G  +                          
Sbjct: 316  YSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTV 375

Query: 275  ---------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                           GK+ H Y I++G+   + +   L+++Y KC  I  +   F     
Sbjct: 376  ASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTET 435

Query: 320  KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
            ++ V WN M+          E+   F  M+ +G+  + F+  S L +C+SL  + LG+QI
Sbjct: 436  ENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQI 495

Query: 380  HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
            H + LK G   +V VS+ L+ +YA  G L   LK+F  + E D VSW ++I  +A  E  
Sbjct: 496  HTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKF 555

Query: 440  VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
             +EA+  + +M+  G   + + F + ++A +       G Q+HAQ      +++ ++ NA
Sbjct: 556  -AEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNA 614

Query: 500  LLSCYGKCGEMDDC----EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
            L+S Y +CG++ D     +KIF++     D +SWNS+ISG+  +    +A++L   M + 
Sbjct: 615  LVSLYARCGKVRDAYFAFDKIFSK-----DNISWNSLISGFAQSGHCEEALSLFSQMSKA 669

Query: 556  GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
            GQ ++ FTF   +SA A+VA ++ G ++HA  ++   + +  + + L+ +Y+KCG ID A
Sbjct: 670  GQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDA 729

Query: 616  SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
             R F  MP +N  SWN+M++GY++HGHG KAL+LF  MK  G LP+HVTFVGVLSACSH 
Sbjct: 730  ERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHV 789

Query: 676  GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
            GLVDEG K+F+SM +V+GL+P+ E ++C+VDLLGR+G L +   F+ +MPI P++++ RT
Sbjct: 790  GLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRT 849

Query: 736  VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
            +L AC     +  ++G  AA+ L E+EP+++  YVLL+NMYA  GKW    + R+ MK+ 
Sbjct: 850  LLSACIVH--KNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDR 907

Query: 796  EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
             VKKE G SW+ + + VH F AGD+ HP  D IYE L++LN+   + GY+PQT   L D 
Sbjct: 908  GVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTNSLLNDA 967

Query: 856  EPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
            E   K      HSEK+A+AF +L+ +S  PI + KNLRVCGDCH+  K++SKI  R IV+
Sbjct: 968  ERRQKGPTQIIHSEKLAIAFGLLSLSSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVV 1027

Query: 915  RDSNRFHHFNDGKCSCGDYW 934
            RDS RFHHF  G CSC DYW
Sbjct: 1028 RDSYRFHHFKGGICSCKDYW 1047



 Score =  252 bits (644), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 153/510 (30%), Positives = 266/510 (52%), Gaps = 51/510 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H  +LK GF+ + ++CN L+ +Y R+G+   A ++F+ M  R+ VS+  ++SG 
Sbjct: 288 KVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGL 347

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           + +G S++A ++FK+M       +   + S+L AC   G      G Q H   +K+  + 
Sbjct: 348 SQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVG--ALLVGKQFHSYAIKAGMSS 405

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D ++   L+ +Y  C      A   F   ET +++ WN ++  Y    +    FK+F++M
Sbjct: 406 DIILEGALLDLYVKC-SDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQM 464

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           Q EG    ++PN++T+ S++     S L    L +QI   V K G   ++YV S L+  +
Sbjct: 465 QMEG----IEPNQFTYPSILRTC--SSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMY 518

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------------------------- 272
           A+LG   +A KIF ++ +K+VVS   ++ G                              
Sbjct: 519 AKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFA 578

Query: 273 ------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                        +G+++H     SG  D ++VGN LV++YA+CG + D+   F  +  K
Sbjct: 579 SAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSK 638

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D++SWN++ISG  Q+G  EEA+  F  M + G   ++F+    +S+ A++  + LG+QIH
Sbjct: 639 DNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIH 698

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
              +K G DS+  VSN L++LYA  G +    + FF MPE +++SWN+++  ++      
Sbjct: 699 AMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYS-QHGHG 757

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
            +A+  + DM++ G  PN VTF+ +L+A S
Sbjct: 758 FKALSLFEDMKQLGVLPNHVTFVGVLSACS 787



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 150/569 (26%), Positives = 252/569 (44%), Gaps = 60/569 (10%)

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC-AMRRDGLMSSNFSLISTLSSCASL 370
           S+F F   +  +  NT +S    N   E   +NF   M   G+ +++ + +  L  C S 
Sbjct: 24  SIFFFF--QKFLEHNTALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSS 81

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
           GW   G ++HG+ LK+G  ++V +   L+ LY   G L   + VF  MP      WN V+
Sbjct: 82  GWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVL 141

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG-KLGHQVHAQVIKYN 489
             F   + +    +  +  M +    P+  T+  +L       +      ++HA+ I + 
Sbjct: 142 HRFVAGK-MAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHG 200

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV 549
             N   + N L+  Y K G ++  +K+F  + ++RD VSW +M+SG   +    +A+ L 
Sbjct: 201 YENSLFVCNPLIDLYFKNGFLNSAKKVFDGL-QKRDSVSWVAMLSGLSQSGCEEEAVLLF 259

Query: 550 WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
             M   G     + F++VLSAC  V   + G ++H   ++     +  + +ALV +YS+ 
Sbjct: 260 CQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRL 319

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
           G    A + F+ M  R+  S+NS+ISG ++ G+ DKAL LF +M LD   PD VT   +L
Sbjct: 320 GNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLL 379

Query: 670 SACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI-------- 721
           SACS  G +  G K F S +   G+   +     ++DL  +  ++    EF         
Sbjct: 380 SACSSVGALLVG-KQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENV 438

Query: 722 ---NKM-----------------------PITPNSLIWRTVLGACCRANCRKTELGRKAA 755
              N M                        I PN   + ++L  C  ++ R  +LG +  
Sbjct: 439 VLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTC--SSLRAVDLGEQIH 496

Query: 756 NMLFEMEPQ-NAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
             + +   Q N     +L +MYA  GK +   K  + +KE +V      SW  M      
Sbjct: 497 TQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDV-----VSWTAM------ 545

Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAG 843
            +AG   H +    + +   L ++M+D G
Sbjct: 546 -IAGYAQHEK----FAEALNLFKEMQDQG 569



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 5/123 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  I+K G   +  + N LI +Y + G++  A + F EMP++N +SW  +++GY
Sbjct: 692 KLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGY 751

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKFGM---QVHCLVLK 116
           +  G   +A  +F++M + G L N      VL AC   G    G K+     +VH LV K
Sbjct: 752 SQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPK 811

Query: 117 SNQ 119
              
Sbjct: 812 PEH 814


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 349/973 (35%), Positives = 550/973 (56%), Gaps = 57/973 (5%)

Query: 5    KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
            K  H +I++ G+  D  + N+L+N+Y +  DL SA ++F  +  R+ VS+  ++  Y  K
Sbjct: 203  KKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQK 262

Query: 65   GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
                E   +F +M   G   ++    ++L A     PS    G ++H L +      D  
Sbjct: 263  AYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTT--PSMLDEGKRIHKLAVNEGLNSDIR 320

Query: 125  VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
            V   L  M+  C +    A++  E    RD++ +N++I+  +Q G     F+ + +M+ +
Sbjct: 321  VGTALATMFVRCGDVAG-AKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSD 379

Query: 185  GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
            G    +  N  T+ S++ A  +S   G+  L  I + + + G  SD+ +G++L+S +AR 
Sbjct: 380  G----VVMNRTTYLSVLNACSTSKALGAGEL--IHSHISEVGHSSDVQIGNSLISMYARC 433

Query: 245  GNFYYARKIFEQMIQKNVVSMNGLMEG--RRK---------------------------- 274
            G+   AR++F  M +++++S N ++ G  RR+                            
Sbjct: 434  GDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLL 493

Query: 275  -----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                       GK +H  ++RSG+     + N L+NMY +CG+I ++++VF     +D +
Sbjct: 494  SACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDII 553

Query: 324  SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
            SWN+MI+G  Q+G YE A   F  M+++GL     +  S L  C +   + LG+QIH   
Sbjct: 554  SWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLI 613

Query: 384  LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
            ++ GL  DV++ NAL+++Y   G L    +VF  +   + +SW ++IG FAD +    +A
Sbjct: 614  IESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFAD-QGEDRKA 672

Query: 444  VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
             + +  M+  G+ P   TF +IL A  S +    G +V A ++      +T + NAL+S 
Sbjct: 673  FELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISA 732

Query: 504  YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
            Y K G M D  K+F +M  R D +SWN MI+GY  N L   A+   + M ++G  L+ F+
Sbjct: 733  YSKSGSMTDARKVFDKMPNR-DIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFS 791

Query: 564  FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
            F ++L+AC+S + LE G  VHA  V+  ++ DV +G+AL+ MY+KCG ++ A   FD   
Sbjct: 792  FVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFT 851

Query: 624  VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
             +NV +WN+MI+ YA+HG   KAL  F+ M  +G  PD  TF  +LSAC+H+GLV EG +
Sbjct: 852  EKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNR 911

Query: 684  HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CR 742
             F S+   +GL P +E + C+V LLGRAG   + E  IN+MP  P++ +W T+LGAC   
Sbjct: 912  IFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIH 971

Query: 743  ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
             N     L   AAN   ++  +N   YVLL+N+YA+ G+W+DVAK R+ M+   ++KE G
Sbjct: 972  GN---VALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPG 1028

Query: 803  CSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKED 862
             SW+ + + +H F+A D SHPE   IYE+LK L+ +M  AGY P T++ L +L+ E +E 
Sbjct: 1029 RSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQET 1088

Query: 863  LVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFH 921
             +  HSE++A+A+ L +     PIRI KNLR+CGDCH+A KFISK+VGREI+ RDSNRFH
Sbjct: 1089 SLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFH 1148

Query: 922  HFNDGKCSCGDYW 934
             F +GKCSC D+W
Sbjct: 1149 TFKNGKCSCEDFW 1161



 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 227/776 (29%), Positives = 401/776 (51%), Gaps = 59/776 (7%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           +AK  H Q+++ G   D+FL N LIN+YV+   ++ A ++F +MP R+ +SW  ++S Y 
Sbjct: 100 EAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYA 159

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            +G   +A ++F+EM  AGF+ ++    S+L AC  C P+  ++G ++H  ++++    D
Sbjct: 160 QQGFKKKAFQLFEEMQTAGFIPSKITYISILTAC--CSPAELEYGKKIHSKIIEAGYQRD 217

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V N L+ MYG C E    AR++F  I  RD++S+N+++ +Y+Q+        LF +M 
Sbjct: 218 PRVQNSLLNMYGKC-EDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMS 276

Query: 183 REGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            EG    + P++ T+ +L+ A    S+L      ++I  +    GL SD+ VG+AL + F
Sbjct: 277 SEG----IPPDKVTYINLLDAFTTPSMLDEG---KRIHKLAVNEGLNSDIRVGTALATMF 329

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------- 274
            R G+   A++  E    ++VV  N L+    +                           
Sbjct: 330 VRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYL 389

Query: 275 --------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                         G+ +H ++   G    V +GN L++MYA+CG +  +R +F  M  +
Sbjct: 390 SVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKR 449

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D +SWN +I+G  +     EA+  +  M+ +G+     + +  LS+C +      G+ IH
Sbjct: 450 DLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIH 509

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
            + L+ G+ S+  ++NAL+++Y   G +     VF      D +SWNS+I   A   +  
Sbjct: 510 EDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYE 569

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
           + A K +L+M++ G  P+ +TF ++L    +    +LG Q+H  +I+  +  +  + NAL
Sbjct: 570 A-AYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNAL 628

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD 560
           ++ Y +CG + D  ++F  +   R+ +SW +MI G+       KA  L W M   G +  
Sbjct: 629 INMYIRCGSLQDAYEVFHSL-RHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPV 687

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
             TF+++L AC S A L+ G +V A  + +  E D  +G+AL+  YSK G +  A + FD
Sbjct: 688 KSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFD 747

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
            MP R++ SWN MI+GYA++G G  AL    QM+  G + +  +FV +L+ACS    ++E
Sbjct: 748 KMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEE 807

Query: 681 GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE----FINKMPITPNSLI 732
           G K   +      +   +   + ++ +  + G L++ +E    F  K  +T N++I
Sbjct: 808 G-KRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMI 862



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 162/607 (26%), Positives = 292/607 (48%), Gaps = 54/607 (8%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           + K +H  ++ +G+   + + N L+NMY KC ++ D+  VF  M  +D +SWN++IS   
Sbjct: 100 EAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYA 159

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           Q G  ++A   F  M+  G + S  + IS L++C S   +  G++IH + ++ G   D  
Sbjct: 160 QQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPR 219

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V N+LL++Y     L    +VF  +   D VS+N+++G +A  +A V E +  +  M   
Sbjct: 220 VQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQ-KAYVEECIGLFGQMSSE 278

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G  P+ VT+IN+L A ++ SM   G ++H   +   + ++  +  AL + + +CG++   
Sbjct: 279 GIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGA 338

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
           ++     ++ RD V +N++I+    +    +A    + M   G  ++  T+ +VL+AC++
Sbjct: 339 KQALEAFAD-RDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACST 397

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
              L  G  +H+         DV IG++L+ MY++CG +  A   F+ MP R++ SWN++
Sbjct: 398 SKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAI 457

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-----------HAGLVDEGF 682
           I+GYAR     +A+ L+ QM+ +G  P  VTF+ +LSAC+           H  ++  G 
Sbjct: 458 IAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGI 517

Query: 683 KH-------FKSMSQVYGLIPQLEQ------------FSCMVDLLGRAGELDKIEEF--- 720
           K          +M +  G I + +             ++ M+    + G  +   +    
Sbjct: 518 KSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLE 577

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY-VLLANMYASG 779
           + K  + P+ + + +VL  C   N    ELGR+   ++ E   Q  VN    L NMY   
Sbjct: 578 MKKEGLEPDKITFASVLVGC--KNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRC 635

Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
           G  +D  +   +++   V      SW  M  G       D+    K        EL  +M
Sbjct: 636 GSLQDAYEVFHSLRHRNV-----MSWTAMIGGF-----ADQGEDRKAF------ELFWQM 679

Query: 840 RDAGYVP 846
           ++ G+ P
Sbjct: 680 QNDGFKP 686



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 205/386 (53%), Gaps = 4/386 (1%)

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           +  + +C     +   ++IH + ++ G+  D+ +SN L+++Y     +S   +VF  MP 
Sbjct: 86  VDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPR 145

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            D +SWNS+I  +A  +    +A + + +M+ AG+ P+ +T+I+IL A  S +  + G +
Sbjct: 146 RDVISWNSLISCYAQ-QGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKK 204

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +H+++I+     +  ++N+LL+ YGKC ++    ++F+ +  RRD VS+N+M+  Y    
Sbjct: 205 IHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIY-RRDVVSYNTMLGLYAQKA 263

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
            + + + L   M   G   D  T+  +L A  + + L+ G  +H   V   L  D+ +G+
Sbjct: 264 YVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGT 323

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           AL  M+ +CG +  A +  +    R+V  +N++I+  A+HGH ++A   + QM+ DG + 
Sbjct: 324 ALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVM 383

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           +  T++ VL+ACS +  +  G      +S+V G    ++  + ++ +  R G+L +  E 
Sbjct: 384 NRTTYLSVLNACSTSKALGAGELIHSHISEV-GHSSDVQIGNSLISMYARCGDLPRAREL 442

Query: 721 INKMPITPNSLIWRTVLGACCRANCR 746
            N MP   + + W  ++    R   R
Sbjct: 443 FNTMP-KRDLISWNAIIAGYARREDR 467



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 85/161 (52%), Gaps = 3/161 (1%)

Query: 555 RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
           R    +   +  ++  C    +L     +HA  V A +  D+ + + L++MY KC  +  
Sbjct: 76  RPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSD 135

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
           A + F  MP R+V SWNS+IS YA+ G   KA  LF +M+  G +P  +T++ +L+AC  
Sbjct: 136 AHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCS 195

Query: 675 AGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
              ++ G K H K +   Y   P+++  + ++++ G+  +L
Sbjct: 196 PAELEYGKKIHSKIIEAGYQRDPRVQ--NSLLNMYGKCEDL 234



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 17/155 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ K  H +I+K     DV +   LI++Y + G L  A ++FD   ++N V+W  +++ Y
Sbjct: 806 EEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAY 865

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G++++A   F  M + G   +     S+L AC   G            LV++ N+ F
Sbjct: 866 AQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSG------------LVMEGNRIF 913

Query: 122 DGLVS----NVLIAMYGSCLESTDCARRIFEEIET 152
             L S    +  I  YG  +     A R F+E ET
Sbjct: 914 SSLESQHGLSPTIEHYGCLVGLLGRAGR-FQEAET 947


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 358/951 (37%), Positives = 538/951 (56%), Gaps = 35/951 (3%)

Query: 5    KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVSGYT 62
            K  H +IL  G   D FL N LI +Y + G L+SA KLFD  PD  R+ V+W  I+S + 
Sbjct: 646  KRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHA 705

Query: 63   HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQ-ECGPSGFKFGMQVHCLVLKSNQTF 121
             K  + +   +F+ + R+     R+ L  V + C     PS  +    +H   +K    +
Sbjct: 706  DK--ARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAE---SLHGYAVKIGLQW 760

Query: 122  DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
            D  V+  L+ +Y       + AR +F+ +  RD++ WN ++  Y   G       LFS  
Sbjct: 761  DVFVAGALVNIYAKFGRIRE-ARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEF 819

Query: 182  QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILA------MVKKAGLLSDLYVGS 235
             R G R    P++ T  +L     S      + L+Q+ A      M       SD+   +
Sbjct: 820  NRTGLR----PDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWN 875

Query: 236  ALVSGFARLGNFYYARKIFEQMIQKNV-------VSMNGLMEGR---RKGKEVHGYLIRS 285
              +S F + G  + A   F  MI   V       V M  ++ G      GK++HG ++RS
Sbjct: 876  KTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRS 935

Query: 286  GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
            GL  +V+VGN L+NMY K G++  +R+VF  M   D VSWNTMISG   +G  E ++  F
Sbjct: 936  GLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMF 995

Query: 346  CAMRRDGLMSSNFSLISTLSSCASLGW-IMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
              + R GL+   F++ S L +C+SLG    L  QIH   +K G+  D  VS  L+ +Y+ 
Sbjct: 996  VDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSK 1055

Query: 405  AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
            +G +     +F      D  SWN+++  +  S     +A++ Y+ M+ +G   N +T  N
Sbjct: 1056 SGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDF-PKALRLYILMQESGERANQITLAN 1114

Query: 465  ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
               AA      K G Q+ A V+K     +  + + +L  Y KCGEM+   +IF  +    
Sbjct: 1115 AAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSP- 1173

Query: 525  DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
            D+V+W +MISG + N     A+     M     + D +TFAT++ AC+ +  LE+G ++H
Sbjct: 1174 DDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIH 1233

Query: 585  ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGD 644
            A  V+    FD  + ++LVDMY+KCG I+ A   F       + SWN+MI G A+HG+ +
Sbjct: 1234 ANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAE 1293

Query: 645  KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCM 704
            +AL  F +MK  G  PD VTF+GVLSACSH+GLV E +++F SM ++YG+ P++E +SC+
Sbjct: 1294 EALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCL 1353

Query: 705  VDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ 764
            VD L RAG + + E+ I+ MP   ++ ++RT+L A CR    + E G++ A  L  +EP 
Sbjct: 1354 VDALSRAGRIREAEKVISSMPFEASASMYRTLLNA-CRVQVDR-ETGKRVAEKLLALEPS 1411

Query: 765  NAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPE 824
            ++  YVLL+N+YA+  +WE+VA AR  M++A VKK+ G SWV +K+ VH+FVAGD SH E
Sbjct: 1412 DSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEE 1471

Query: 825  KDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-L 883
             D+IY K++ + +++R+ GY+P T FAL D+E E KE  + YHSEK+A+A+ L +     
Sbjct: 1472 TDVIYNKVEYIMKRIREEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPST 1531

Query: 884  PIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             +R++KNLRVCGDCH+A K+ISK+  RE+VLRD+NRFHHF  G CSCGDYW
Sbjct: 1532 TLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582



 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 169/672 (25%), Positives = 293/672 (43%), Gaps = 95/672 (14%)

Query: 4    AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            A+  H   +K G  +DVF+   L+N+Y + G +  A  LFD M  R+ V W  ++  Y  
Sbjct: 746  AESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVD 805

Query: 64   KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
             G+  EA  +F E  R G   +   L ++ R                   V+KS Q    
Sbjct: 806  TGLEYEALLLFSEFNRTGLRPDDVTLCTLAR-------------------VVKSKQ---- 842

Query: 124  LVSNVL------IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
               NVL      +  YG+ L          ++ +  D+I+WN  +S + QRG+T      
Sbjct: 843  ---NVLEWQLKQLKAYGTKL------FMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDC 893

Query: 178  FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ---QILAMVKKAGLLSDLYVG 234
            F  M        +  +  TF  ++     SV++G   L+   QI  +V ++GL   + VG
Sbjct: 894  FVDM----INSRVACDGLTFVVML-----SVVAGLNCLELGKQIHGIVVRSGLDQVVSVG 944

Query: 235  SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRKG-- 275
            + L++ + + G+   AR +F QM + ++VS N ++ G                  R G  
Sbjct: 945  NCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLL 1004

Query: 276  -----------------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
                                    ++H   +++G+     V   L+++Y+K G ++++  
Sbjct: 1005 PDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEF 1064

Query: 313  VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
            +F    G D  SWN M+ G   +G + +A+  +  M+  G  ++  +L +   +   L  
Sbjct: 1065 LFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVG 1124

Query: 373  IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
            +  G+QI    +K G + D+ V + +L +Y   G +    ++F  +P  D V+W ++I  
Sbjct: 1125 LKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISG 1184

Query: 433  FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN 492
              ++      A+  Y  MR +   P+  TF  ++ A S  +  + G Q+HA  +K N A 
Sbjct: 1185 CVEN-GQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAF 1243

Query: 493  ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
            +  +  +L+  Y KCG ++D   +F R +  R   SWN+MI G   +    +A+     M
Sbjct: 1244 DPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRI-ASWNAMIVGLAQHGNAEEALQFFEEM 1302

Query: 553  MQRGQRLDHFTFATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGR 611
              RG   D  TF  VLSAC+    +    E  ++      +E ++   S LVD  S+ GR
Sbjct: 1303 KSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGR 1362

Query: 612  IDYASRFFDLMP 623
            I  A +    MP
Sbjct: 1363 IREAEKVISSMP 1374



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 210/456 (46%), Gaps = 38/456 (8%)

Query: 275  GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM--IGKDSVSWNTMISGL 332
            GK  H  ++ SG      + N L+ MY+KCG++  +R +F       +D V+WN ++S  
Sbjct: 645  GKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAH 704

Query: 333  DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
                   +    F  +RR  + ++  +L      C         + +HG  +K+GL  DV
Sbjct: 705  ADKA--RDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDV 762

Query: 393  SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
             V+ AL+++YA  G +     +F  M   D V WN ++ A+ D+  L  EA+  + +  R
Sbjct: 763  FVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDT-GLEYEALLLFSEFNR 821

Query: 453  AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL--LSCYGKCGEM 510
             G  P+ VT   +                 A+V+K   + +  +E  L  L  YG    M
Sbjct: 822  TGLRPDDVTLCTL-----------------ARVVK---SKQNVLEWQLKQLKAYGTKLFM 861

Query: 511  DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
                  +    +  D ++WN  +S ++      +A++    M+      D  TF  +LS 
Sbjct: 862  ------YDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSV 915

Query: 571  CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
             A +  LE G ++H   VR+ L+  V +G+ L++MY K G +  A   F  M   ++ SW
Sbjct: 916  VAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSW 975

Query: 631  NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
            N+MISG A  G  + ++ +F  +   G LPD  T   VL ACS  G          + + 
Sbjct: 976  NTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAM 1035

Query: 691  VYGLIPQLEQF--SCMVDLLGRAGELDKIE-EFINK 723
              G++  L+ F  + ++D+  ++G++++ E  F+N+
Sbjct: 1036 KAGVV--LDSFVSTTLIDVYSKSGKMEEAEFLFVNQ 1069



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 128/265 (48%), Gaps = 10/265 (3%)

Query: 2    KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
            K  K     ++K GF  D+F+ + ++++Y++ G++ SA ++F+E+P  + V+W  ++SG 
Sbjct: 1126 KQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGC 1185

Query: 62   THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
               G    A   +  M  +    + Y   ++++AC     +  + G Q+H   +K N  F
Sbjct: 1186 VENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLL--TALEQGRQIHANTVKLNCAF 1243

Query: 122  DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
            D  V   L+ MY  C    D AR +F+   T  + SWN++I   +Q G+     + F  M
Sbjct: 1244 DPFVMTSLVDMYAKCGNIED-ARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEM 1302

Query: 182  QREGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
            +  G    + P+  TF G L   ++S ++S +Y  +   +M K  G+  ++   S LV  
Sbjct: 1303 KSRG----VTPDRVTFIGVLSACSHSGLVSEAY--ENFYSMQKIYGIEPEIEHYSCLVDA 1356

Query: 241  FARLGNFYYARKIFEQMIQKNVVSM 265
             +R G    A K+   M  +   SM
Sbjct: 1357 LSRAGRIREAEKVISSMPFEASASM 1381



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 3/205 (1%)

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           + +IL  A + S   LG + HA+++      +  + N L++ Y KCG +    K+F    
Sbjct: 629 WFSILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTP 688

Query: 522 E-RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
           +  RD V+WN+++S   H +      +L   + +        T A V   C   A+    
Sbjct: 689 DTSRDLVTWNAILSA--HADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAA 746

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
             +H   V+  L++DV +  ALV++Y+K GRI  A   FD M +R+V  WN M+  Y   
Sbjct: 747 ESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDT 806

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTF 665
           G   +AL LFS+    G  PD VT 
Sbjct: 807 GLEYEALLLFSEFNRTGLRPDDVTL 831



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 84/389 (21%), Positives = 160/389 (41%), Gaps = 47/389 (12%)

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE--HDQVSWNSVI 430
           + LG++ H   L  G   D  ++N L+++Y+  G LS   K+F   P+   D V+WN+++
Sbjct: 642 LPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAIL 701

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
            A AD      +    +  +RR+  S    T   +       +       +H   +K  +
Sbjct: 702 SAHADK---ARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGL 758

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
             +  +  AL++ Y K G + +   +F  M   RD V WN M+  Y+   L  +A+ L  
Sbjct: 759 QWDVFVAGALVNIYAKFGRIREARVLFDGMG-LRDVVLWNVMMKAYVDTGLEYEALLLFS 817

Query: 551 FMMQRGQRLDHFTFATVLSACASVAT-LERGM-EVHACGVRACLEFDVVIGSALVDMYSK 608
              + G R D  T  T+     S    LE  + ++ A G +  +  D   GS        
Sbjct: 818 EFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGS-------- 869

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
                            +V +WN  +S + + G   +A+  F  M       D +TFV +
Sbjct: 870 -----------------DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVM 912

Query: 669 LSACSHAGLVDEGFKHFKSMSQVYGLIPQ--LEQF----SCMVDLLGRAGELDKIEEFIN 722
           LS  +    ++ G        Q++G++ +  L+Q     +C++++  + G + +      
Sbjct: 913 LSVVAGLNCLELG-------KQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFW 965

Query: 723 KMPITPNSLIWRTVLGACCRANCRKTELG 751
           +M    + + W T++  C  +   +  +G
Sbjct: 966 QMNEV-DLVSWNTMISGCALSGLEECSVG 993


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  619 bits (1597), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 348/953 (36%), Positives = 540/953 (56%), Gaps = 35/953 (3%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVSGYT 62
           K  H  I+  G   D ++ N LI +Y + G L SA KLFD  P  DR+ V++  I++ Y 
Sbjct: 33  KRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYA 92

Query: 63  HKG------MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLK 116
           H G       ++EA  +F+ + ++  L  R+ L  + + C   G       +Q + +  K
Sbjct: 93  HTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAV--K 150

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
               +D  V+  L+ +Y    +    AR +F+ +  RD++ WN ++  Y + G    V  
Sbjct: 151 IGLQWDVFVAGALVNIYAK-FQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLG 209

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL---SDLYV 233
           LFS   R G    L+P+  +  +++       +    L +Q+ A   K  +    SD+ V
Sbjct: 210 LFSAFHRSG----LRPDCVSVRTILMGVGKKTVFEREL-EQVRAYATKLFVCDDDSDVTV 264

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNV----------VSMNGLMEGRRKGKEVHGYLI 283
            +  +S + + G  + A   F  MI+  V          +S+   +     GK++HG ++
Sbjct: 265 WNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVV 324

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
           R G    V+V N  +NMY K G+++ +R +F  M   D +SWNT+ISG  ++G  E ++ 
Sbjct: 325 RFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLR 384

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGW-IMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
            F  + R GL+   F++ S L +C+SL     +G+Q+H   LK G+  D  VS AL+ +Y
Sbjct: 385 LFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVY 444

Query: 403 ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
           +  G +     +F      D  SWN+++  F  S+    EA++ +  M   G   + +TF
Sbjct: 445 SKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNY-REALRLFSLMHERGEKADQITF 503

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
            N   AA      + G Q+HA VIK     +  + + +L  Y KCGEM    K+F ++  
Sbjct: 504 ANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPS 563

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
             D+V+W ++ISG + N    +A+     M   G + D +TFAT++ AC+ +  LE+G +
Sbjct: 564 P-DDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQ 622

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
           +HA  ++    FD  + ++LVDMY+KCG I+ A   F  M  R+V  WN+MI G A+HG+
Sbjct: 623 IHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGN 682

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
            ++AL  F++MK  G  PD VTF+GVLSACSH+GL  + +K+F SM + YG+ P++E +S
Sbjct: 683 AEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYS 742

Query: 703 CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
           C+VD L RAG + + E+ ++ MP   ++ ++RT+L A CR    K E G + A  LF M+
Sbjct: 743 CLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNA-CRVQGDK-ETGERVAEKLFTMD 800

Query: 763 PQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESH 822
           P ++  YVLL+N+YA+  +WE+   AR  MK   VKKE G SW+ MK+ VH+FVAGD SH
Sbjct: 801 PSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSH 860

Query: 823 PEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK 882
            E DLIY K++ + +++++ GYVP T+FAL D+E E KE  +SYHSEK+A+A+ L +   
Sbjct: 861 EETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPP 920

Query: 883 -LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
              +R++KNLRVCGDCH+A K+IS +  REIVLRD+NRFHHF  G CSCGDYW
Sbjct: 921 STTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSCGDYW 973



 Score =  253 bits (645), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 202/707 (28%), Positives = 341/707 (48%), Gaps = 69/707 (9%)

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE-- 148
           S+LR       S    G + H +++ S    D  V+N LI MY  C  S   AR++F+  
Sbjct: 18  SILR--HAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKC-GSLFSARKLFDIT 74

Query: 149 EIETRDLISWNSIISVYSQRGD------TISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
               RDL+++N+I++ Y+  G+      T   F +F R+ R+    + +   +T   L  
Sbjct: 75  PQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIF-RLLRQSVMLTTR---HTLSPLFK 130

Query: 203 AAYSSVLSGSYLLQQIL-AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
                +L GS    + L     K GL  D++V  ALV+ +A+      AR +F++M  ++
Sbjct: 131 LC---LLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRD 187

Query: 262 VVSMNGLMEGRRK---GKEVHGYLI---RSGLF-DMVAVGNGLVNMYAKCGTIDDSRSVF 314
           VV  N +M+   +   G EV G      RSGL  D V+V   L+ +  K     +   V 
Sbjct: 188 VVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVR 247

Query: 315 RFMI-------GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
            +           D   WN  +S   Q G   EA+  F  M +  +   + + I  LS  
Sbjct: 248 AYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVV 307

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
           ASL  + LG+QIHG  ++ G D  VSV+N+ +++Y  AG ++   ++F  M E D +SWN
Sbjct: 308 ASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWN 367

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK-LGHQVHAQVI 486
           +VI   A S  L   +++ ++D+ R+G  P+  T  ++L A SS      +G QVH   +
Sbjct: 368 TVISGCARS-GLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCAL 426

Query: 487 KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAM 546
           K  +  ++ +  AL+  Y K G+M++ E +F    +  D  SWN+M+ G+  ++   +A+
Sbjct: 427 KAGIVLDSFVSTALIDVYSKGGKMEEAELLFHN-QDGFDLASWNAMMHGFTVSDNYREAL 485

Query: 547 NLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMY 606
            L   M +RG++ D  TFA    A   +  L++G ++HA  ++    +D+ + S ++DMY
Sbjct: 486 RLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMY 545

Query: 607 SKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFV 666
            KCG +  A + F+ +P  +  +W ++ISG   +G  ++AL  + QM+L G  PD  TF 
Sbjct: 546 LKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFA 605

Query: 667 GVLSACSHAGLVDEG-------------FKHFKSMSQV------------YGLIPQLEQ- 700
            ++ ACS    +++G             F  F   S V            YGL  ++   
Sbjct: 606 TLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR 665

Query: 701 ----FSCMVDLLGRAGELDKIEEFINKMP---ITPNSLIWRTVLGAC 740
               ++ M+  L + G  ++   F N+M    +TP+ + +  VL AC
Sbjct: 666 SVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSAC 712



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 153/323 (47%), Gaps = 16/323 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K  F YD+F+ + ++++Y++ G++ SA K+F+++P  + V+W  ++SG 
Sbjct: 517 QQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGC 576

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   +A   + +M  AG   + Y   ++++AC     +  + G Q+H  ++K N  F
Sbjct: 577 VENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLL--TALEQGKQIHANIMKLNCAF 634

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V   L+ MY  C    D A  +F  + TR +  WN++I   +Q G+       F+ M
Sbjct: 635 DPFVMTSLVDMYAKCGNIED-AYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEM 693

Query: 182 QREGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           +  G    + P+  TF G L   ++S + S +Y  +   +M K  G+  ++   S LV  
Sbjct: 694 KSRG----VTPDRVTFIGVLSACSHSGLTSDAY--KNFDSMQKTYGVEPEIEHYSCLVDA 747

Query: 241 FARLGNFYYARKIFEQMIQKNVVSM--NGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG-- 296
            +R G+   A K+   M  +   +M    L   R +G +  G  +   LF M    +   
Sbjct: 748 LSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAY 807

Query: 297 --LVNMYAKCGTIDDSRSVFRFM 317
             L N+YA     +++ S    M
Sbjct: 808 VLLSNIYAAANQWENAVSARNMM 830



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/419 (21%), Positives = 174/419 (41%), Gaps = 54/419 (12%)

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
           C++    L+   FS++    + + L   +LG++ H   +  GL+ D  V+N L+++YA  
Sbjct: 5   CSVSPSSLLPQWFSILRHAIADSDL---ILGKRTHAVIVTSGLNPDRYVTNNLITMYAKC 61

Query: 406 GYLSRCLKVFFLMPEHDQ--VSWNSVIGAFADSEAL-----VSEAVKYYLDMRRAGWSPN 458
           G L    K+F + P+ D+  V++N+++ A+A +  L       EA   +  +R++     
Sbjct: 62  GSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTT 121

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
             T   +      +        +    +K  +  +  +  AL++ Y K   + +   +F 
Sbjct: 122 RHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFD 181

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
           RM   RD V WN M+  Y+      + + L     + G R D  +  T+L         E
Sbjct: 182 RMPV-RDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFE 240

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
           R +E     VRA                       YA++ F      +V  WN  +S Y 
Sbjct: 241 RELE----QVRA-----------------------YATKLFVCDDDSDVTVWNKTLSSYL 273

Query: 639 RHGHGDKALTLFSQMKLDGPLP-DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
           + G G +A+  F  M +   +P D +T++ +LS  +          H +   Q++G + +
Sbjct: 274 QAGEGWEAVDCFRDM-IKSRVPCDSLTYIVILSVVA-------SLNHLELGKQIHGAVVR 325

Query: 698 L--EQF----SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
              +QF    +  +++  +AG ++       +M    + + W TV+  C R+   +  L
Sbjct: 326 FGWDQFVSVANSAINMYVKAGSVNYARRMFGQMK-EVDLISWNTVISGCARSGLEECSL 383


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 339/885 (38%), Positives = 503/885 (56%), Gaps = 55/885 (6%)

Query: 92   VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE 151
            +LR C   G      G  +H  V+KS    D  + N L+ +Y  C  S + A ++F EI 
Sbjct: 134  MLRTCASKGD--LNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKC-GSANYACKVFGEIP 190

Query: 152  TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
             RD++SW ++I+ +   G       LF  M+REG    ++ NE+T+ + + A   S+   
Sbjct: 191  ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREG----VEANEFTYATALKAC--SMCLD 244

Query: 212  SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
                +Q+ A   K G  SDL+VGSALV  +A+ G    A ++F  M ++N VS N L+ G
Sbjct: 245  LEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNG 304

Query: 272  -----------------------------------------RRKGKEVHGYLIRSGLFDM 290
                                                      R G+ VH   IR G    
Sbjct: 305  FAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELD 364

Query: 291  VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
              +   LV+MY+KCG   D+  VF  +   D VSW+ +I+ LDQ G   EA   F  MR 
Sbjct: 365  EFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRH 424

Query: 351  DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
             G++ + F+L S +S+   LG +  G+ IH    K G + D +V NAL+++Y   G +  
Sbjct: 425  SGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQD 484

Query: 411  CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
              +VF      D +SWN+++  F D+E      ++ +  M   G++PN  TFI+IL + S
Sbjct: 485  GCRVFEATTNRDLISWNALLSGFHDNET-CDTGLRIFNQMLAEGFNPNMYTFISILRSCS 543

Query: 471  SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
            S S   LG QVHAQ++K ++     +  AL+  Y K   ++D E IF R+  +RD  +W 
Sbjct: 544  SLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLI-KRDLFAWT 602

Query: 531  SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
             +++GY  +    KA+     M + G + + FT A+ LS C+ +ATL+ G ++H+  ++A
Sbjct: 603  VIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKA 662

Query: 591  CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
                D+ + SALVDMY+KCG ++ A   FD +  R+  SWN++I GY++HG G KAL  F
Sbjct: 663  GQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAF 722

Query: 651  SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
              M  +G +PD VTF+GVLSACSH GL++EG KHF S+S++YG+ P +E ++CMVD+LGR
Sbjct: 723  EAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGR 782

Query: 711  AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
            AG+  ++E FI +M +T N LIW TVLGAC        E G +AA  LFE+EP+   NY+
Sbjct: 783  AGKFHEVESFIEEMKLTSNVLIWETVLGACKMHG--NIEFGERAAMKLFELEPEIDSNYI 840

Query: 771  LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
            LL+NM+A+ G W+DV   R  M    VKKE GCSWV +   VHVF++ D SHP+   I+ 
Sbjct: 841  LLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHL 900

Query: 831  KLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMK 889
            KL++L+QK+   GY P T   L ++    K++L+ YHSE++A+AF +L+ +++  IRI K
Sbjct: 901  KLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFK 960

Query: 890  NLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            NLR+CGDCH   K IS+I  +E+V+RD N FHHF +G CSC ++W
Sbjct: 961  NLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 1005



 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 187/688 (27%), Positives = 324/688 (47%), Gaps = 64/688 (9%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H Q++K G   D  L N+L+NVY + G    A K+F E+P+R+ VSW  +++G+ 
Sbjct: 146 EGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFV 205

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            +G  + A  +F EM R G   N +   + L+AC  C     +FG QVH   +K     D
Sbjct: 206 AEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMC--LDLEFGKQVHAEAIKVGDFSD 263

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V + L+ +Y  C E    A R+F  +  ++ +SWN++++ ++Q GD   V  LF RM 
Sbjct: 264 LFVGSALVDLYAKCGEMV-LAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMT 322

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQIL-AMVKKAGLLSDLYVGSALVSGF 241
                +S    ++T  +++    +   SG+    QI+ ++  + G   D ++   LV  +
Sbjct: 323 GSEINFS----KFTLSTVLKGCAN---SGNLRAGQIVHSLAIRIGCELDEFISCCLVDMY 375

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLM-----EGRRK---------------------- 274
           ++ G    A K+F ++   +VVS + ++     +G+ +                      
Sbjct: 376 SKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLA 435

Query: 275 --------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                         G+ +H  + + G      V N LV MY K G++ D   VF     +
Sbjct: 436 SLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNR 495

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D +SWN ++SG   N   +  +  F  M  +G   + ++ IS L SC+SL  + LG+Q+H
Sbjct: 496 DLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVH 555

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
            + +K  LD +  V  AL+ +YA   +L     +F  + + D  +W  ++  +A  +   
Sbjct: 556 AQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYA-QDGQG 614

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
            +AVK ++ M+R G  PN  T  + L+  S  +    G Q+H+  IK   + +  + +AL
Sbjct: 615 EKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASAL 674

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD 560
           +  Y KCG ++D E +F  +   RD VSWN++I GY  +    KA+     M+  G   D
Sbjct: 675 VDMYAKCGCVEDAEVVFDGLVS-RDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPD 733

Query: 561 HFTFATVLSACASVATLERGME-----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
             TF  VLSAC+ +  +E G +         G+   +E      + +VD+  + G+    
Sbjct: 734 EVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEH----YACMVDILGRAGKFHEV 789

Query: 616 SRFFDLMPVR-NVYSWNSMISGYARHGH 642
             F + M +  NV  W +++     HG+
Sbjct: 790 ESFIEEMKLTSNVLIWETVLGACKMHGN 817



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 144/321 (44%), Gaps = 16/321 (4%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H QI+K+    + F+   L+++Y +   L  A  +F+ +  R+  +W  IV+GY  
Sbjct: 551 GKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQ 610

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   +A K F +M R G   N + L S L  C     +    G Q+H + +K+ Q+ D 
Sbjct: 611 DGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRI--ATLDSGRQLHSMAIKAGQSGDM 668

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V++ L+ MY  C    D A  +F+ + +RD +SWN+II  YSQ G      K F  M  
Sbjct: 669 FVASALVDMYAKCGCVED-AEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLD 727

Query: 184 EGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           EG      P+E TF G L   ++  ++      +   ++ K  G+   +   + +V    
Sbjct: 728 EG----TVPDEVTFIGVLSACSHMGLIEEGK--KHFNSLSKIYGITPTIEHYACMVDILG 781

Query: 243 RLGNFYYARKIFEQM-IQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG---- 296
           R G F+      E+M +  NV+    ++   +  G    G      LF++    +     
Sbjct: 782 RAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYIL 841

Query: 297 LVNMYAKCGTIDDSRSVFRFM 317
           L NM+A  G  DD  +V   M
Sbjct: 842 LSNMFAAKGMWDDVTNVRALM 862



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 91/174 (52%), Gaps = 2/174 (1%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           ++ +L  CAS   L  G  +H   +++ +  D  + ++LV++Y+KCG  +YA + F  +P
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            R+V SW ++I+G+   G+G  A+ LF +M+ +G   +  T+   L ACS    ++ G K
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFG-K 249

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
              + +   G    L   S +VDL  + GE+   E     MP   N++ W  +L
Sbjct: 250 QVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMP-KQNAVSWNALL 302


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 334/898 (37%), Positives = 515/898 (57%), Gaps = 55/898 (6%)

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           +  F     +   +L  C  C     + G+Q+H  + KS  + D  + N LI +Y  C  
Sbjct: 49  KGNFTPTSVSYSKLLSQC--CTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC-R 105

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
           +   AR++ +E    DL+SW+++IS Y+Q G        F  M   G    +K NE+TF 
Sbjct: 106 NFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLG----VKCNEFTFS 161

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           S++ A   S++    + +Q+  +V  +G   D++V + LV  +A+   F  ++++F+++ 
Sbjct: 162 SVLKAC--SIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP 219

Query: 259 QKNVVSMNGL-----------------------------------------MEGRRKGKE 277
           ++NVVS N L                                         +    +GK 
Sbjct: 220 ERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKI 279

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +HGYLI+ G        N LV+MYAK G + D+ SVF  +   D VSWN +I+G   +  
Sbjct: 280 IHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEH 339

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
           +E+A+     M+R G+  + F+L S L +CA +G   LG+Q+H   +K+ ++SD+ VS  
Sbjct: 340 HEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVG 399

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+ +Y+    L      F L+PE D ++WN++I  ++     + EA+  +++M + G   
Sbjct: 400 LVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDM-EALSLFVEMHKEGIGF 458

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           N  T   IL + +   +  +  QVH   +K    ++  + N+L+  YGKC  ++D E+IF
Sbjct: 459 NQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIF 518

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
              +   D VS+ SMI+ Y       +A+ L   M     + D F  +++L+ACA+++  
Sbjct: 519 EECT-IGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAF 577

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
           E+G ++H   ++     D+  G++LV+MY+KCG ID A R F  +  R + SW++MI G 
Sbjct: 578 EQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGL 637

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
           A+HGHG +AL LF+QM  +G  P+H+T V VL AC+HAGLV E   +F+SM +++G  P 
Sbjct: 638 AQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPM 697

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
            E ++CM+DLLGRAG++++  E +NKMP   N+ +W  +LGA  R + +  ELGR+AA M
Sbjct: 698 QEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGA-ARIH-KDVELGRRAAEM 755

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           LF +EP+ +  +VLLAN+YAS GKWE+VA+ R+ M++++VKKE G SW+ +KD V+ F+ 
Sbjct: 756 LFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLV 815

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL 877
           GD SH     IY KL EL+  M  AGYVP  +  L D+E   KE L+ +HSEK+AVAF L
Sbjct: 816 GDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGL 875

Query: 878 TRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
               +  PIR+ KNLRVC DCH+AFK+I KIV REI++RD NRFHHF DG CSCGDYW
Sbjct: 876 IATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933



 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 194/677 (28%), Positives = 328/677 (48%), Gaps = 57/677 (8%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  I K G + D  + N LIN+Y +  +   A KL DE  + + VSW+ ++SGY   G+
Sbjct: 78  IHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGL 137

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
              A   F EM   G   N +   SVL+AC        + G QVH +V+ S    D  V+
Sbjct: 138 GGGALMAFHEMHLLGVKCNEFTFSSVLKACSIV--KDLRIGKQVHGVVVVSGFEGDVFVA 195

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+ MY  C E  D ++R+F+EI  R+++SWN++ S Y Q         LF  M   G 
Sbjct: 196 NTLVVMYAKCDEFLD-SKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSG- 253

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              +KPNE++  S++ A   + L  S   + I   + K G   D +  +ALV  +A++G+
Sbjct: 254 ---IKPNEFSLSSMVNAC--TGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGD 308

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG----------------------------------- 271
              A  +FE++ Q ++VS N ++ G                                   
Sbjct: 309 LADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKA 368

Query: 272 ------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                 +  G+++H  L++  +   + V  GLV+MY+KC  ++D+R  F  +  KD ++W
Sbjct: 369 CAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAW 428

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N +ISG  Q     EA+  F  M ++G+  +  +L + L S A L  + + +Q+HG  +K
Sbjct: 429 NAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVK 488

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G  SD+ V N+L+  Y    ++    ++F      D VS+ S+I A+A       EA+K
Sbjct: 489 SGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQY-GQGEEALK 547

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            +L+M+     P+     ++L A ++ S  + G Q+H  ++KY    +    N+L++ Y 
Sbjct: 548 LFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYA 607

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           KCG +DD  + F+ ++E R  VSW++MI G   +    +A+ L   M++ G   +H T  
Sbjct: 608 KCGSIDDAGRAFSELTE-RGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLV 666

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIG--SALVDMYSKCGRIDYASRFFDLMP 623
           +VL AC   A L    +++   +     F  +    + ++D+  + G+I+ A    + MP
Sbjct: 667 SVLGACNH-AGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMP 725

Query: 624 VR-NVYSWNSMISGYAR 639
              N   W +++ G AR
Sbjct: 726 FEANASVWGALL-GAAR 741



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 159/627 (25%), Positives = 291/627 (46%), Gaps = 61/627 (9%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  ++  GF  DVF+ NTL+ +Y +  +   + +LFDE+P+RN VSW  + S Y  
Sbjct: 176 GKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQ 235

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                EA  +F EMV +G   N ++L S++ AC   G      G  +H  ++K    +D 
Sbjct: 236 IDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT--GLRDSSRGKIIHGYLIKLGYDWDP 293

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
             +N L+ MY    +  D A  +FE+I+  D++SWN++I+            +L  +M+R
Sbjct: 294 FSANALVDMYAKVGDLAD-AISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR 352

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G    + PN +T  S + A     L    L +Q+ + + K  + SDL+V   LV  +++
Sbjct: 353 SG----ICPNIFTLSSALKACAGMGL--KELGRQLHSSLMKMDMESDLFVSVGLVDMYSK 406

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRKG----------- 275
                 AR  F  + +K++++ N ++ G                  ++G           
Sbjct: 407 CDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTI 466

Query: 276 -------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                        ++VHG  ++SG    + V N L++ Y KC  ++D+  +F      D 
Sbjct: 467 LKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDL 526

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           VS+ +MI+   Q G  EEA+  F  M+   L    F   S L++CA+L     G+Q+H  
Sbjct: 527 VSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVH 586

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            LK G   D+   N+L+++YA  G +    + F  + E   VSW+++IG  A       +
Sbjct: 587 ILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLA-QHGHGRQ 645

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAA---ASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
           A++ +  M + G SPN +T +++L A   A   +  KL  +   ++  +    E      
Sbjct: 646 ALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYA--C 703

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI-SGYIHNEL-LPKAMNLVWFMMQRGQ 557
           ++   G+ G++++  ++  +M    +   W +++ +  IH ++ L +    + F+++  +
Sbjct: 704 MIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEK 763

Query: 558 RLDHFTFATVLSACA---SVATLERGM 581
              H   A + ++     +VA + R M
Sbjct: 764 SGTHVLLANIYASAGKWENVAEVRRLM 790



 Score =  193 bits (491), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 235/476 (49%), Gaps = 54/476 (11%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S   K+ H  ++K G+ +D F  N L+++Y +VGDLA A  +F+++   + VSW  +++G
Sbjct: 274 SSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAG 333

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
                   +A ++  +M R+G   N + L S L+AC   G    + G Q+H  ++K +  
Sbjct: 334 CVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLK--ELGRQLHSSLMKMDME 391

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D  VS  L+ MY  C +  + AR  F  +  +DLI+WN+IIS YSQ  + +    LF  
Sbjct: 392 SDLFVSVGLVDMYSKC-DLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVE 450

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M +EG  +    N+ T  +++ +  ++ L   ++ +Q+  +  K+G  SD+YV ++L+  
Sbjct: 451 MHKEGIGF----NQTTLSTILKS--TAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDS 504

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------------------------- 272
           + +  +   A +IFE+    ++VS   ++                               
Sbjct: 505 YGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVC 564

Query: 273 -------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                         +GK++H ++++ G    +  GN LVNMYAKCG+IDD+   F  +  
Sbjct: 565 SSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTE 624

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           +  VSW+ MI GL Q+G   +A+  F  M ++G+  ++ +L+S L +C   G ++   ++
Sbjct: 625 RGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAG-LVTEAKL 683

Query: 380 HGEGLK--LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           + E ++   G          ++ L   AG ++  +++   MP E +   W +++GA
Sbjct: 684 YFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGA 739



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 172/341 (50%), Gaps = 4/341 (1%)

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           AI+N   + +     ++ S    LS C +   +  G QIH    K GL  D S+ N L++
Sbjct: 42  AILNL--IDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLIN 99

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           LY+         K+     E D VSW+++I  +A +  L   A+  + +M   G   N  
Sbjct: 100 LYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQN-GLGGGALMAFHEMHLLGVKCNEF 158

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           TF ++L A S     ++G QVH  V+      +  + N L+  Y KC E  D +++F  +
Sbjct: 159 TFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEI 218

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
            E R+ VSWN++ S Y+  +   +A+ L + M+  G + + F+ +++++AC  +    RG
Sbjct: 219 PE-RNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRG 277

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
             +H   ++   ++D    +ALVDMY+K G +  A   F+ +   ++ SWN++I+G   H
Sbjct: 278 KIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLH 337

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
            H ++AL L  QMK  G  P+  T    L AC+  GL + G
Sbjct: 338 EHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELG 378


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 338/873 (38%), Positives = 503/873 (57%), Gaps = 57/873 (6%)

Query: 107  GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE--TRDLISWNSIISV 164
            G +VH  +++     D    N LI MY  C  S + AR+++ ++    R + SWN+++  
Sbjct: 160  GREVHEHIIQHCTVLDQYTVNALINMYIQC-GSIEEARQVWNKLNHTERTVHSWNAMVVG 218

Query: 165  YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
            Y Q G      KL   MQ+ G    L     T   L+++  S   S     ++I     K
Sbjct: 219  YVQYGYIEEALKLLREMQQHG----LALGRATTMRLLSSCKSP--SALECGREIHVEAMK 272

Query: 225  AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS-------------------- 264
            A LL D+ V + +++ +A+ G+ + AR++F++M  K+VVS                    
Sbjct: 273  ARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEI 332

Query: 265  -----MNGLMEGR----------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
                   G++  R                + GK VH +++ +G    +AVG  LV MYAK
Sbjct: 333  FQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAK 392

Query: 304  CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
            CG+  D R VF  ++ +D ++WNTMI GL + G +EEA   +  M+R+G+M +  + +  
Sbjct: 393  CGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVIL 452

Query: 364  LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
            L++C +   +  G++IH   +K G   D+SV NAL+S+YA  G +     +F  M   D 
Sbjct: 453  LNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDI 512

Query: 424  VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
            +SW ++IG  A S  L +EA+  + DM++AG  PN VT+ +IL A SS +    G ++H 
Sbjct: 513  ISWTAMIGGLAKS-GLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQ 571

Query: 484  QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
            QVI+  +A +  + N L++ Y  CG + D  ++F RM++R D V++N+MI GY  + L  
Sbjct: 572  QVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQR-DIVAYNAMIGGYAAHNLGK 630

Query: 544  KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
            +A+ L   + + G + D  T+  +L+ACA+  +LE   E+H+  ++     D  +G+ALV
Sbjct: 631  EALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALV 690

Query: 604  DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
              Y+KCG    A   FD M  RNV SWN++I G A+HG G   L LF +MK++G  PD V
Sbjct: 691  STYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIV 750

Query: 664  TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
            TFV +LSACSHAGL++EG ++F SMS+ +G+ P +E + CMVDLLGRAG+LD++E  I  
Sbjct: 751  TFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKT 810

Query: 724  MPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKW 782
            MP   N+ IW  +LGAC    N     +  +AA    +++P NA  YV L++MYA+ G W
Sbjct: 811  MPFQANTRIWGALLGACRIHGN---VPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMW 867

Query: 783  EDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDA 842
            +  AK RK M++  V KE G SW+ + D +H FVA D SHPE + IY +L +L   M+  
Sbjct: 868  DSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKME 927

Query: 843  GYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRN-SKLPIRIMKNLRVCGDCHSAF 901
            GYVP T+  + D++   KE+ V +HSE++A+A+ L       PIRI KNLRVC DCH+A 
Sbjct: 928  GYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHTAT 987

Query: 902  KFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            KFI+KIV REIV RD NRFHHF DG CSCGDYW
Sbjct: 988  KFITKIVDREIVARDVNRFHHFKDGVCSCGDYW 1020



 Score =  325 bits (833), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 215/734 (29%), Positives = 379/734 (51%), Gaps = 69/734 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEM--PDRNSVSWACIVSGYTHKG 65
           H  I++H    D +  N LIN+Y++ G +  A ++++++   +R   SW  +V GY   G
Sbjct: 164 HEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYG 223

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
              EA K+ +EM + G  L R     +L +C+   PS  + G ++H   +K+   FD  V
Sbjct: 224 YIEEALKLLREMQQHGLALGRATTMRLLSSCK--SPSALECGREIHVEAMKARLLFDVNV 281

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           +N ++ MY  C  S   AR +F+++ET+ ++SW  II  Y+  G +   F++F +MQ+EG
Sbjct: 282 ANCILNMYAKC-GSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEG 340

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLL---QQILAMVKKAGLLSDLYVGSALVSGFA 242
               + PN  T+ +++ A      SG   L   + + + +  AG  SDL VG+ALV  +A
Sbjct: 341 ----VVPNRITYINVLNA-----FSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYA 391

Query: 243 RLGNFYYARKIFEQMIQKNVVSMN----GLMEG-------------RRK----------- 274
           + G++   R++FE+++ +++++ N    GL EG             +R+           
Sbjct: 392 KCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVI 451

Query: 275 -------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                        G+E+H  +++ G    ++V N L++MYA+CG+I D+R +F  M+ KD
Sbjct: 452 LLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKD 511

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            +SW  MI GL ++G   EA+  F  M++ GL  +  +  S L++C+S   +  G++IH 
Sbjct: 512 IISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQ 571

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
           + ++ GL +D  V+N L+++Y+  G +    +VF  M + D V++N++IG +A +  L  
Sbjct: 572 QVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYA-AHNLGK 630

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           EA+K +  ++  G  P+ VT+IN+L A ++    +   ++H+ V+K    ++T++ NAL+
Sbjct: 631 EALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALV 690

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
           S Y KCG   D   +F +M  +R+ +SWN++I G   +      + L   M   G + D 
Sbjct: 691 STYAKCGSFSDALLVFDKMM-KRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDI 749

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG--SALVDMYSKCGRIDYASRFF 619
            TF ++LSAC+    LE G   + C +         I     +VD+  + G++D      
Sbjct: 750 VTFVSLLSACSHAGLLEEGRR-YFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALI 808

Query: 620 DLMPVR-NVYSWNSMISGYARHGHGDKA-LTLFSQMKLDGPLPDH-VTFVGVLSACSHAG 676
             MP + N   W +++     HG+   A     S +KLD   PD+   +V +    + AG
Sbjct: 809 KTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLD---PDNAAVYVALSHMYAAAG 865

Query: 677 LVDEGFKHFKSMSQ 690
           + D   K  K M Q
Sbjct: 866 MWDSAAKLRKLMEQ 879



 Score =  264 bits (675), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 206/763 (26%), Positives = 352/763 (46%), Gaps = 133/763 (17%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H++ +K    +DV + N ++N+Y + G +  A ++FD+M  ++ VSW  I+ GY   G 
Sbjct: 266 IHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGH 325

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           S  A ++F++M + G + NR    +VL A    GP+  K+G  VH  +L +    D  V 
Sbjct: 326 SEIAFEIFQKMQQEGVVPNRITYINVLNAFS--GPAALKWGKTVHSHILNAGHESDLAVG 383

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
             L+ MY  C    DC R++FE++  RDLI+WN++I   ++ G+     +++ +MQREG 
Sbjct: 384 TALVKMYAKCGSYKDC-RQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREG- 441

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              + PN+ T+  L+ A  +   +  +  ++I + V K G + D+ V +AL+S +AR G+
Sbjct: 442 ---MMPNKITYVILLNACVNP--TALHWGREIHSRVVKDGFMFDISVQNALISMYARCGS 496

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------------- 274
              AR +F +M++K+++S   ++ G  K                                
Sbjct: 497 IKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNA 556

Query: 275 ---------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    G+ +H  +I +GL     V N LVNMY+ CG++ D+R VF  M  +D V++
Sbjct: 557 CSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAY 616

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N MI G   +   +EA+  F  ++ +GL     + I+ L++CA+ G +   ++IH   LK
Sbjct: 617 NAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLK 676

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G  SD S+ NAL+S YA  G  S  L VF  M + + +SWN++IG  A       + ++
Sbjct: 677 DGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCA-QHGRGQDVLQ 735

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSC 503
            +  M+  G  P+ VTF+++L+A S   + + G +    + + +     TIE+   ++  
Sbjct: 736 LFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSR-DFGITPTIEHYGCMVDL 794

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
            G+ G++D+ E +   M  + +   W ++                               
Sbjct: 795 LGRAGQLDEVEALIKTMPFQANTRIWGAL------------------------------- 823

Query: 564 FATVLSAC---ASVATLERGMEVHACGVRACLEFD---VVIGSALVDMYSKCGRIDYASR 617
               L AC    +V   ER  E       + L+ D     +  AL  MY+  G  D A++
Sbjct: 824 ----LGACRIHGNVPVAERAAE-------SSLKLDPDNAAVYVALSHMYAAAGMWDSAAK 872

Query: 618 FFDLMPVRNVY-----SW-------NSMISGYARHGHGDKALT----LFSQMKLDGPLPD 661
              LM  R V      SW       +  ++    H   +K       L   MK++G +PD
Sbjct: 873 LRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPD 932

Query: 662 HVTFVGVLSACSHAGLVDEGFK------HFKSMSQVYGLIPQL 698
             + +           VDEG K      H + ++  YGLI  L
Sbjct: 933 TRSVMHD---------VDEGEKENAVCHHSERLAIAYGLISTL 966



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 218/440 (49%), Gaps = 21/440 (4%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           +++ G   ++   +  L  C  +  ++ G+++H   ++     D    NAL+++Y   G 
Sbjct: 132 LQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGS 191

Query: 408 LSRCLKVFFLMPEHDQV--SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
           +    +V+  +   ++   SWN+++  +      + EA+K   +M++ G +    T + +
Sbjct: 192 IEEARQVWNKLNHTERTVHSWNAMVVGYVQY-GYIEEALKLLREMQQHGLALGRATTMRL 250

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           L++  S S  + G ++H + +K  +  +  + N +L+ Y KCG + +  ++F +M E + 
Sbjct: 251 LSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKM-ETKS 309

Query: 526 EVSWNSMISGYI---HNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
            VSW  +I GY    H+E+   A  +   M Q G   +  T+  VL+A +  A L+ G  
Sbjct: 310 VVSWTIIIGGYADCGHSEI---AFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKT 366

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
           VH+  + A  E D+ +G+ALV MY+KCG      + F+ +  R++ +WN+MI G A  G+
Sbjct: 367 VHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGN 426

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
            ++A  ++ QM+ +G +P+ +T+V +L+AC +   +  G +   S     G +  +   +
Sbjct: 427 WEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWG-REIHSRVVKDGFMFDISVQN 485

Query: 703 CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
            ++ +  R G +       NKM +  + + W  ++G        K+ LG +A  +  +M+
Sbjct: 486 ALISMYARCGSIKDARLLFNKM-VRKDIISWTAMIGGLA-----KSGLGAEALAVFQDMQ 539

Query: 763 ----PQNAVNYVLLANMYAS 778
                 N V Y  + N  +S
Sbjct: 540 QAGLKPNRVTYTSILNACSS 559



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 157/332 (47%), Gaps = 40/332 (12%)

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +AM++V ++ Q+G R++   +  +L  C  V  L  G EVH   ++ C   D    +AL+
Sbjct: 124 RAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALI 183

Query: 604 DMYSKCGRIDYASRFFDLM--PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           +MY +CG I+ A + ++ +    R V+SWN+M+ GY ++G+ ++AL L  +M+  G    
Sbjct: 184 NMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALG 243

Query: 662 HVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
             T + +LS+C     ++ G + H ++M     L+  +   +C++++  + G + +  E 
Sbjct: 244 RATTMRLLSSCKSPSALECGREIHVEAMKA--RLLFDVNVANCILNMYAKCGSIHEAREV 301

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKA-ANMLFEMEPQNAVNYVLLANMYASG 779
            +KM  T + + W  ++G    A+C  +E+  +    M  E    N + Y+ + N ++  
Sbjct: 302 FDKME-TKSVVSWTIIIGG--YADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGP 358

Query: 780 G--KWEDVA---------KARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
              KW             ++  A+  A VK  A C   + KD   VF    E    +DLI
Sbjct: 359 AALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCG--SYKDCRQVF----EKLVNRDLI 412

Query: 829 --------------YEKLKELNQKMRDAGYVP 846
                         +E+  E+  +M+  G +P
Sbjct: 413 AWNTMIGGLAEGGNWEEASEIYHQMQREGMMP 444



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 47/97 (48%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  +LK G+  D  L N L++ Y + G  + A  +FD+M  RN +SW  I+ G   
Sbjct: 667 AKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQ 726

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G   +  ++F+ M   G   +     S+L AC   G
Sbjct: 727 HGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAG 763


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  606 bits (1563), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 300/708 (42%), Positives = 450/708 (63%), Gaps = 15/708 (2%)

Query: 238 VSGFARLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRRKGKEVHGYLIRSGL 287
           + G+ + G +  A +++ QM +           +V+   G     + G++VH  +I  G 
Sbjct: 92  IIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGF 151

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
              V VG  L +MY KCG+++++R VF  M  +D VSWN +I+G  QNG   EA+  F  
Sbjct: 152 ESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSE 211

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M+ +G+  ++ +L+S +  CA L  +  G+QIH   ++ G++SDV V N L+++YA  G 
Sbjct: 212 MQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGN 271

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           ++   K+F  MP  D  SWN++IG ++ +     EA+ ++  M+  G  PN +T +++L 
Sbjct: 272 VNTAHKLFERMPIRDVASWNAIIGGYSLNSQH-HEALAFFNRMQVRGIKPNSITMVSVLP 330

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
           A +     + G Q+H   I+    +   + NAL++ Y KCG ++   K+F RM  +++ V
Sbjct: 331 ACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMP-KKNVV 389

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           +WN++ISGY  +    +A+ L   M  +G + D F   +VL ACA    LE+G ++H   
Sbjct: 390 AWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYT 449

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
           +R+  E +VV+G+ LVD+Y+KCG ++ A + F+ MP ++V SW +MI  Y  HGHG+ AL
Sbjct: 450 IRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDAL 509

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDL 707
            LFS+M+  G   DH+ F  +L+ACSHAGLVD+G ++F+ M   YGL P+LE ++C+VDL
Sbjct: 510 ALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDL 569

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAV 767
           LGRAG LD+    I  M + P++ +W  +LGA CR +C   ELG +AA  LFE++P NA 
Sbjct: 570 LGRAGHLDEANGIIKNMSLEPDANVWGALLGA-CRIHC-NIELGEQAAKHLFELDPDNAG 627

Query: 768 NYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDL 827
            YVLL+N+YA   +WEDVAK RK MKE  VKK+ GCS V +   V  F+ GD +HP+ + 
Sbjct: 628 YYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQ 687

Query: 828 IYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIR 886
           IY  L+ L ++MR AGYVP T  AL D+E E+KE+++S HSEK+A++F ++  +  +PIR
Sbjct: 688 IYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIR 747

Query: 887 IMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           IMKNLRVC DCH+A KFISKIVGREI++RD+NRFHH  +G CSCGDYW
Sbjct: 748 IMKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795



 Score =  253 bits (645), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 231/422 (54%), Gaps = 4/422 (0%)

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
           I  ++V W   I G  +NG + +A+  +  M+R G+       +S + +C S   +  G+
Sbjct: 81  IRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGR 140

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           ++H + +  G +SDV V  AL S+Y   G L    +VF  MP+ D VSWN++I  ++ + 
Sbjct: 141 KVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQN- 199

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
               EA+  + +M+  G  PN  T ++++   +     + G Q+H   I+  + ++  + 
Sbjct: 200 GQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVV 259

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ 557
           N L++ Y KCG ++   K+F RM   RD  SWN++I GY  N    +A+     M  RG 
Sbjct: 260 NGLVNMYAKCGNVNTAHKLFERMP-IRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGI 318

Query: 558 RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
           + +  T  +VL ACA +  LE+G ++H   +R+  E + V+G+ALV+MY+KCG ++ A +
Sbjct: 319 KPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYK 378

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGL 677
            F+ MP +NV +WN++ISGY++HGH  +AL LF +M+  G  PD    V VL AC+H   
Sbjct: 379 LFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLA 438

Query: 678 VDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
           +++G K     +   G    +   + +VD+  + G ++  ++   +MP   + + W T++
Sbjct: 439 LEQG-KQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQDVVSWTTMI 496

Query: 738 GA 739
            A
Sbjct: 497 LA 498



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 161/532 (30%), Positives = 259/532 (48%), Gaps = 64/532 (12%)

Query: 50  NSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQ 109
           N+V W   + GY   G  N+A +++ +M R G   ++    SV++AC     S  + G +
Sbjct: 84  NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGS--QSDLQAGRK 141

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
           VH  ++      D +V   L +MY  C  S + AR++F+ +  RD++SWN+II+ YSQ G
Sbjct: 142 VHEDIIARGFESDVIVGTALASMYTKC-GSLENARQVFDRMPKRDVVSWNAIIAGYSQNG 200

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL-----QQILAMVKK 224
                  LFS MQ  G    +KPN  T  S++          ++LL     +QI     +
Sbjct: 201 QPYEALALFSEMQVNG----IKPNSSTLVSVMPVC-------AHLLALEQGKQIHCYAIR 249

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------ 272
           +G+ SD+ V + LV+ +A+ GN   A K+FE+M  ++V S N ++ G             
Sbjct: 250 SGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAF 309

Query: 273 -----------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
                                         +G+++HGY IRSG      VGN LVNMYAK
Sbjct: 310 FNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAK 369

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           CG ++ +  +F  M  K+ V+WN +ISG  Q+G   EA+  F  M+  G+   +F+++S 
Sbjct: 370 CGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSV 429

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L +CA    +  G+QIHG  ++ G +S+V V   L+ +YA  G ++   K+F  MPE D 
Sbjct: 430 LPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDV 489

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSW ++I A+        +A+  +  M+  G   + + F  IL A S   +   G Q + 
Sbjct: 490 VSWTTMILAYG-IHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ-YF 547

Query: 484 QVIK--YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           Q +K  Y +A +      L+   G+ G +D+   I   MS   D   W +++
Sbjct: 548 QCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALL 599



 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 150/470 (31%), Positives = 226/470 (48%), Gaps = 56/470 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  I+  GF  DV +   L ++Y + G L +A ++FD MP R+ VSW  I++GY+  G  
Sbjct: 143 HEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQP 202

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA  +F EM   G   N   L SV+  C        + G Q+HC  ++S    D LV N
Sbjct: 203 YEALALFSEMQVNGIKPNSSTLVSVMPVCAHL--LALEQGKQIHCYAIRSGIESDVLVVN 260

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY  C  + + A ++FE +  RD+ SWN+II  YS           F+RMQ  G  
Sbjct: 261 GLVNMYAKC-GNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRG-- 317

Query: 188 YSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
             +KPN  T  S++ A A+   L      QQI     ++G  S+  VG+ALV+ +A+ GN
Sbjct: 318 --IKPNSITMVSVLPACAHLFALEQG---QQIHGYAIRSGFESNDVVGNALVNMYAKCGN 372

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGR---------------------------------- 272
              A K+FE+M +KNVV+ N ++ G                                   
Sbjct: 373 VNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPA 432

Query: 273 -------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                   +GK++HGY IRSG    V VG GLV++YAKCG ++ ++ +F  M  +D VSW
Sbjct: 433 CAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSW 492

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
            TMI     +G  E+A+  F  M+  G    + +  + L++C+  G +  G Q + + +K
Sbjct: 493 TTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ-YFQCMK 551

Query: 386 --LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
              GL   +     L+ L   AG+L     +   M  E D   W +++GA
Sbjct: 552 SDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGA 601



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 143/270 (52%), Gaps = 13/270 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H   ++ G   DV + N L+N+Y + G++ +A KLF+ MP R+  SW  I+ GY
Sbjct: 238 EQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGY 297

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +     +EA   F  M   G   N   + SVL AC        + G Q+H   ++S    
Sbjct: 298 SLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHL--FALEQGQQIHGYAIRSGFES 355

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           + +V N L+ MY  C  + + A ++FE +  +++++WN+IIS YSQ G       LF  M
Sbjct: 356 NDVVGNALVNMYAKC-GNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEM 414

Query: 182 QREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           Q +G    +KP+ +   S++ A   + ++  G    +QI     ++G  S++ VG+ LV 
Sbjct: 415 QAQG----IKPDSFAIVSVLPACAHFLALEQG----KQIHGYTIRSGFESNVVVGTGLVD 466

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
            +A+ GN   A+K+FE+M +++VVS   ++
Sbjct: 467 IYAKCGNVNTAQKLFERMPEQDVVSWTTMI 496



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 123/222 (55%), Gaps = 2/222 (0%)

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F +   R + V W   I GY+ N    KA+ L + M + G   D   F +V+ AC S + 
Sbjct: 76  FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSD 135

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           L+ G +VH   +    E DV++G+AL  MY+KCG ++ A + FD MP R+V SWN++I+G
Sbjct: 136 LQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAG 195

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           Y+++G   +AL LFS+M+++G  P+  T V V+  C+H   +++G K     +   G+  
Sbjct: 196 YSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQG-KQIHCYAIRSGIES 254

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
            +   + +V++  + G ++   +   +MPI  +   W  ++G
Sbjct: 255 DVLVVNGLVNMYAKCGNVNTAHKLFERMPIR-DVASWNAIIG 295



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 53/99 (53%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H   ++ GF  +V +   L+++Y + G++ +A KLF+ MP+++ VSW  ++  Y
Sbjct: 440 EQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAY 499

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   +A  +F +M   G  L+  A  ++L AC   G
Sbjct: 500 GIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAG 538


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  605 bits (1561), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 335/873 (38%), Positives = 501/873 (57%), Gaps = 57/873 (6%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE--TRDLISWNSIISV 164
           G QVH  +++     D    N LI MY  C  S + AR++++++    R + SWN+++  
Sbjct: 42  GRQVHQHIIQHRTVPDQYTVNALINMYIQC-GSIEEARQVWKKLSYMERTVHSWNAMVVG 100

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
           Y Q G      KL  +MQ+ G    L P+  T  S +++  S         ++I     +
Sbjct: 101 YIQYGYIEKALKLLRQMQQHG----LAPDRTTIMSFLSSCKSP--GALEWGREIHFQAMQ 154

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS-------------------- 264
           AGLL D+ V + +++ +A+ G+   AR++F++M +K+VVS                    
Sbjct: 155 AGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEI 214

Query: 265 -----MNGLMEGR----------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
                  G++  R                + GK VH  ++ +G     AVG  LV MYAK
Sbjct: 215 FQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAK 274

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           CG+  D R VF  ++ +D ++WNTMI GL + G +EEA   +  M+R+G+M +  + +  
Sbjct: 275 CGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVIL 334

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L++C +   +  G++IH    K G  SD+ V NAL+S+Y+  G +     VF  M   D 
Sbjct: 335 LNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDV 394

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           +SW ++IG  A S    +EA+  Y +M++AG  PN VT+ +IL A SS +  + G ++H 
Sbjct: 395 ISWTAMIGGLAKS-GFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQ 453

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
           QV++  +A +  + N L++ Y  CG + D  ++F RM +R D V++N+MI GY  + L  
Sbjct: 454 QVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQR-DIVAYNAMIGGYAAHNLGK 512

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +A+ L   + + G + D  T+  +L+ACA+  +LE   E+H    +     D  +G+ALV
Sbjct: 513 EALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALV 572

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
             Y+KCG    AS  F+ M  RNV SWN++I G A+HG G  AL LF +MK++G  PD V
Sbjct: 573 STYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIV 632

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TFV +LSACSHAGL++EG ++F SMSQ + +IP +E + CMVDLLGRAG+LD+ E  I  
Sbjct: 633 TFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKT 692

Query: 724 MPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKW 782
           MP   N+ IW  +LGAC    N     +  +AA    +++  NAV YV L++MYA+ G W
Sbjct: 693 MPFQANTRIWGALLGACRIHGN---VPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMW 749

Query: 783 EDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDA 842
           +  AK RK M++  V KE G SW+ + D +H FVA D SHP+ + IY +L  L   M+  
Sbjct: 750 DSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMK 809

Query: 843 GYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAF 901
           GYVP T+  + D++   KE+ V +HSE++A+A+ +++      I I KNLRVC DCH+A 
Sbjct: 810 GYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCPDCHTAT 869

Query: 902 KFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           KFISKIV REI+ RD NRFHHF DG CSCGDYW
Sbjct: 870 KFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902



 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 209/735 (28%), Positives = 380/735 (51%), Gaps = 65/735 (8%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVSGYT 62
           +  H  I++H    D +  N LIN+Y++ G +  A +++ ++   +R   SW  +V GY 
Sbjct: 43  RQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYI 102

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G   +A K+ ++M + G   +R  + S L +C+   P   ++G ++H   +++   FD
Sbjct: 103 QYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKS--PGALEWGREIHFQAMQAGLLFD 160

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V+N ++ MY  C  S + AR +F+++E + ++SW   I  Y+  G + + F++F +M+
Sbjct: 161 VKVANCILNMYAKC-GSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKME 219

Query: 183 REGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           +EG    + PN  T+ S++ A  + +++  G  +  +IL     AG  SD  VG+ALV  
Sbjct: 220 QEG----VVPNRITYISVLNAFSSPAALKWGKAVHSRIL----NAGHESDTAVGTALVKM 271

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMN----GLMEG-------------RRK--------- 274
           +A+ G++   R++FE+++ +++++ N    GL EG             +R+         
Sbjct: 272 YAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITY 331

Query: 275 ---------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                          GKE+H  + ++G    + V N L++MY++CG+I D+R VF  M+ 
Sbjct: 332 VILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVR 391

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           KD +SW  MI GL ++G   EA+  +  M++ G+  +  +  S L++C+S   +  G++I
Sbjct: 392 KDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRI 451

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           H + ++ GL +D  V N L+++Y+  G +    +VF  M + D V++N++IG +A +  L
Sbjct: 452 HQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYA-AHNL 510

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
             EA+K +  ++  G  P+ VT+IN+L A ++    +   ++H  V K    ++T++ NA
Sbjct: 511 GKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNA 570

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+S Y KCG   D   +F +M+ +R+ +SWN++I G   +     A+ L   M   G + 
Sbjct: 571 LVSTYAKCGSFSDASIVFEKMT-KRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKP 629

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG--SALVDMYSKCGRIDYASR 617
           D  TF ++LSAC+    LE G   + C +         I     +VD+  + G++D A  
Sbjct: 630 DIVTFVSLLSACSHAGLLEEGRR-YFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEA 688

Query: 618 FFDLMPVR-NVYSWNSMISGYARHGHGDKA-LTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
               MP + N   W +++     HG+   A     S +KLD  L + V +V +    + A
Sbjct: 689 LIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLD--LDNAVVYVALSHMYAAA 746

Query: 676 GLVDEGFKHFKSMSQ 690
           G+ D   K  K M Q
Sbjct: 747 GMWDSAAKLRKLMEQ 761



 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 212/760 (27%), Positives = 356/760 (46%), Gaps = 133/760 (17%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H Q ++ G  +DV + N ++N+Y + G +  A ++FD+M  ++ VSW   + GY   G 
Sbjct: 148 IHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGR 207

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           S  A ++F++M + G + NR    SVL A     P+  K+G  VH  +L +    D  V 
Sbjct: 208 SETAFEIFQKMEQEGVVPNRITYISVLNAFSS--PAALKWGKAVHSRILNAGHESDTAVG 265

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
             L+ MY  C    DC R++FE++  RDLI+WN++I   ++ G      +++++MQREG 
Sbjct: 266 TALVKMYAKCGSYKDC-RQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREG- 323

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              + PN+ T+  L+ A  +S  +  +  ++I + V KAG  SD+ V +AL+S ++R G+
Sbjct: 324 ---VMPNKITYVILLNACVNS--AALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGS 378

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------------- 274
              AR +F++M++K+V+S   ++ G  K                                
Sbjct: 379 IKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNA 438

Query: 275 ---------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    G+ +H  ++ +GL     VGN LVNMY+ CG++ D+R VF  MI +D V++
Sbjct: 439 CSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAY 498

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N MI G   +   +EA+  F  ++ +GL     + I+ L++CA+ G +   ++IH    K
Sbjct: 499 NAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRK 558

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G  SD SV NAL+S YA  G  S    VF  M + + +SWN++IG  A       +A++
Sbjct: 559 GGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSA-QHGRGQDALQ 617

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSC 503
            +  M+  G  P+ VTF+++L+A S   + + G +    + + + A   TIE+   ++  
Sbjct: 618 LFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQ-DFAIIPTIEHYGCMVDL 676

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
            G+ G++D+ E +   M  + +   W ++                               
Sbjct: 677 LGRAGQLDEAEALIKTMPFQANTRIWGAL------------------------------- 705

Query: 564 FATVLSAC---ASVATLERGMEVHACGVRACLEFDV---VIGSALVDMYSKCGRIDYASR 617
               L AC    +V   ER  E       + L+ D+   V+  AL  MY+  G  D A++
Sbjct: 706 ----LGACRIHGNVPVAERAAE-------SSLKLDLDNAVVYVALSHMYAAAGMWDSAAK 754

Query: 618 FFDLMPVRNVY-----SW-------NSMISGYARHGHGDKALT----LFSQMKLDGPLPD 661
              LM  R V      SW       +  ++    H   +K       L   MK+ G +PD
Sbjct: 755 LRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPD 814

Query: 662 HVTFVGVLSACSHAGLVDEGFK------HFKSMSQVYGLI 695
             + +       H   VDEG K      H + ++  YGLI
Sbjct: 815 TRSVM-------HD--VDEGEKENAVCHHSERLAIAYGLI 845



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 233/484 (48%), Gaps = 26/484 (5%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           +++ G   ++   +  L  C  +  ++ G+Q+H   ++     D    NAL+++Y   G 
Sbjct: 14  LQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGS 73

Query: 408 LSRCLKVFFLMP--EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
           +    +V+  +   E    SWN+++  +      + +A+K    M++ G +P+  T ++ 
Sbjct: 74  IEEARQVWKKLSYMERTVHSWNAMVVGYIQY-GYIEKALKLLRQMQQHGLAPDRTTIMSF 132

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           L++  S    + G ++H Q ++  +  +  + N +L+ Y KCG +++  ++F +M E++ 
Sbjct: 133 LSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKM-EKKS 191

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
            VSW   I GY        A  +   M Q G   +  T+ +VL+A +S A L+ G  VH+
Sbjct: 192 VVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHS 251

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
             + A  E D  +G+ALV MY+KCG      + F+ +  R++ +WN+MI G A  G+ ++
Sbjct: 252 RILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEE 311

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
           A  +++QM+ +G +P+ +T+V +L+AC ++  +  G K   S     G    +   + ++
Sbjct: 312 ASEVYNQMQREGVMPNKITYVILLNACVNSAALHWG-KEIHSRVAKAGFTSDIGVQNALI 370

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM---- 761
            +  R G +       +KM +  + + W  ++G        K+  G +A  +  EM    
Sbjct: 371 SMYSRCGSIKDARLVFDKM-VRKDVISWTAMIGGLA-----KSGFGAEALTVYQEMQQAG 424

Query: 762 -EPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA--GCSWVTM-------KDG 811
            EP N V Y  + N  +S    E   +  + + EA +  +A  G + V M       KD 
Sbjct: 425 VEP-NRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDA 483

Query: 812 VHVF 815
             VF
Sbjct: 484 RQVF 487



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 162/334 (48%), Gaps = 46/334 (13%)

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
           A+++V ++ Q+G +++   +  +L  C  V  L  G +VH   ++     D    +AL++
Sbjct: 7   AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66

Query: 605 MYSKCGRIDYASRFFDLMPV--RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           MY +CG I+ A + +  +    R V+SWN+M+ GY ++G+ +KAL L  QM+  G  PD 
Sbjct: 67  MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126

Query: 663 VTFVGVLSACSHAGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            T +  LS+C   G ++ G + HF++M    GL+  ++  +C++++  + G +++  E  
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQA--GLLFDVKVANCILNMYAKCGSIEEAREVF 184

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ----NAVNYVLLANMYA 777
           +KM    + + W   +G    A+C ++E    A  +  +ME +    N + Y+ + N ++
Sbjct: 185 DKME-KKSVVSWTITIGG--YADCGRSE---TAFEIFQKMEQEGVVPNRITYISVLNAFS 238

Query: 778 SGG--KWEDVAKAR---------KAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKD 826
           S    KW     +R          A+  A VK  A C   + KD   VF    E    +D
Sbjct: 239 SPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCG--SYKDCRQVF----EKLVNRD 292

Query: 827 LI--------------YEKLKELNQKMRDAGYVP 846
           LI              +E+  E+  +M+  G +P
Sbjct: 293 LIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMP 326


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 354/962 (36%), Positives = 541/962 (56%), Gaps = 54/962 (5%)

Query: 5    KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY--- 61
            K  H +I+  G A D FL N L+ +Y + G L+SA ++FD  P+R+ V+W  I+  Y   
Sbjct: 641  KCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAAS 700

Query: 62   --THKGMSNEACKMFKEMVRAGF-LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
              ++ G + E   +F+ ++RA      R  L  VL+ C   G      G  VH   +K  
Sbjct: 701  VDSNDGNAQEGLHLFR-LLRASLGSTTRMTLAPVLKLCLNSGCLWAAEG--VHGYAIKIG 757

Query: 119  QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              +D  VS  L+ +Y  C    D AR +F+ +  RD++ WN ++  Y Q G     F+LF
Sbjct: 758  LEWDVFVSGALVNIYSKCGRMRD-ARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLF 816

Query: 179  SRMQREGFRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLL---SDLYV 233
            S   R G R    P+E++   LI    S V    G +L  Q+ A   K  L     D++ 
Sbjct: 817  SEFHRSGLR----PDEFSV-QLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNPDVFC 871

Query: 234  GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL------------------MEGRRKG 275
             +  +S     G+ + A + F        V+MNGL                   +    G
Sbjct: 872  WNKKLSECLWAGDNWGAIECF--------VNMNGLNIDYDAVTLLVVLAAVAGTDDLELG 923

Query: 276  KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
            K+VHG  ++SGL   V+V N LVNMY+K G    +R VF  M   D +SWN+MIS   Q+
Sbjct: 924  KQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQS 983

Query: 336  GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL-GWIMLGQQIHGEGLKLGLDSDVSV 394
               EE++  F  +  +GL   +F+L S L +C+SL   + + +QIH   LK G  +D  V
Sbjct: 984  SLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFV 1043

Query: 395  SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI-GAFADSEALVSEAVKYYLDMRRA 453
            +  L+ +Y+ +G +     +F    + D   WN+++ G    ++    +A++ +  + ++
Sbjct: 1044 ATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDG--KKALELFSLIHKS 1101

Query: 454  GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
            G   + +T      A     +   G Q+HA  IK    ++  + + +L  Y KCG+M + 
Sbjct: 1102 GEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNA 1161

Query: 514  EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
              +F  +S   D+V+W SMISG + N    +A+ +   M Q     D +TFAT++ A + 
Sbjct: 1162 GIVFNYISAP-DDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSC 1220

Query: 574  VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
            V  LE+G ++HA  ++     D  +G++LVDMY+KCG I+ A R F  M VRN+  WN+M
Sbjct: 1221 VTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAM 1280

Query: 634  ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
            + G A+HG+ ++A+ LF  MK  G  PD V+F+G+LSACSHAGL  E +++  SM   YG
Sbjct: 1281 LVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYG 1340

Query: 694  LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
            + P++E +SC+VD LGRAG + + ++ I  MP   ++ I R +LGAC        E G++
Sbjct: 1341 IEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQG--DVETGKR 1398

Query: 754  AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
             A  LF +EP ++  YVLL+N+YA+  +W+DV  ARK MK   VKK+ G SW+ +K+ +H
Sbjct: 1399 VAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLH 1458

Query: 814  VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
            +FV  D SHP+ D+IY+K++E+ + +R+ GYVP T+F L D+E E KE  + YHSEK+A+
Sbjct: 1459 LFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAI 1518

Query: 874  AF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
            A+ +++  +   IR++KNLRVCGDCH+A K+ISK+  REIVLRD+NRFHHF DG CSCGD
Sbjct: 1519 AYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGD 1578

Query: 933  YW 934
            YW
Sbjct: 1579 YW 1580



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 187/674 (27%), Positives = 321/674 (47%), Gaps = 73/674 (10%)

Query: 106  FGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY 165
             G   H  ++ S    D  +SN L+ MY  C  S   AR++F+    RDL++WN+I+  Y
Sbjct: 639  LGKCTHARIVVSGSAGDHFLSNNLLTMYSKC-GSLSSARQVFDTTPERDLVTWNAILGAY 697

Query: 166  SQRGDT--------ISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ 217
            +   D+        + +F+L         R +L P       L     S  L   +  + 
Sbjct: 698  AASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAP------VLKLCLNSGCL---WAAEG 748

Query: 218  ILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG------ 271
            +     K GL  D++V  ALV+ +++ G    AR +F+ M +++VV  N +++G      
Sbjct: 749  VHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGL 808

Query: 272  RRKGKEVHGYLIRSGL----FDMVAVGNGL--------------VNMY-AKCGTIDDSRS 312
             ++  ++     RSGL    F +  + NG+              V  Y AK    DD+  
Sbjct: 809  EKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNPD 868

Query: 313  VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
            VF          WN  +S     G    AI  F  M    +     +L+  L++ A    
Sbjct: 869  VF---------CWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDD 919

Query: 373  IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG--YLSRCLKVFFLMPEHDQVSWNSVI 430
            + LG+Q+HG  +K GLDSDVSV+N+L+++Y+  G  Y +R  +VF  M   D +SWNS+I
Sbjct: 920  LELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAR--EVFNDMKHLDLISWNSMI 977

Query: 431  GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG-KLGHQVHAQVIKYN 489
             + A S +L  E+V  ++D+   G  P+  T  ++L A SS   G  +  Q+H   +K  
Sbjct: 978  SSCAQS-SLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTG 1036

Query: 490  VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV 549
               ++ +   L+  Y K G+M++ E +F +  +  D   WN+M+ GYI      KA+ L 
Sbjct: 1037 NIADSFVATTLIDVYSKSGKMEEAEFLF-QNKDDLDLACWNAMMFGYIIGNDGKKALELF 1095

Query: 550  WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
              + + G++ D  T AT   AC  +  L++G ++HA  ++A  + D+ + S ++DMY KC
Sbjct: 1096 SLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKC 1155

Query: 610  GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
            G +  A   F+ +   +  +W SMISG   +G+ D+AL ++ +M+    +PD  TF  ++
Sbjct: 1156 GDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLI 1215

Query: 670  SACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS------CMVDLLGRAGELDKIEEFINK 723
             A S    +++G        Q++  + +L+  S       +VD+  + G ++       K
Sbjct: 1216 KASSCVTALEQG-------RQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKK 1268

Query: 724  MPITPNSLIWRTVL 737
            M +  N  +W  +L
Sbjct: 1269 MNVR-NIALWNAML 1281



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 135/272 (49%), Gaps = 17/272 (6%)

Query: 4    AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            ++  H+  LK G   D F+  TLI+VY + G +  A  LF    D +   W  ++ GY  
Sbjct: 1025 SRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYII 1084

Query: 64   KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSG----FKFGMQVHCLVLKSNQ 119
                 +A ++F  + ++G   ++  L +  +AC      G       G Q+H   +K+  
Sbjct: 1085 GNDGKKALELFSLIHKSGEKSDQITLATAAKAC------GCLVLLDQGKQIHAHAIKAGF 1138

Query: 120  TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
              D  V++ ++ MY  C +  + A  +F  I   D ++W S+IS     G+     +++ 
Sbjct: 1139 DSDLHVNSGILDMYIKCGDMVN-AGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 1197

Query: 180  RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            RM++      + P+EYTF +LI A  SS ++     +Q+ A V K   +SD +VG++LV 
Sbjct: 1198 RMRQS----RVMPDEYTFATLIKA--SSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVD 1251

Query: 240  GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             +A+ GN   A ++F++M  +N+   N ++ G
Sbjct: 1252 MYAKCGNIEDAYRLFKKMNVRNIALWNAMLVG 1283



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 167/406 (41%), Gaps = 45/406 (11%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L +  S   ++LG+  H   +  G   D  +SN LL++Y+  G LS   +VF   PE D 
Sbjct: 628 LRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDL 687

Query: 424 VSWNSVIGAFADS----EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
           V+WN+++GA+A S    +    E +  +  +R +  S   +T   +L    +        
Sbjct: 688 VTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAE 747

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
            VH   IK  +  +  +  AL++ Y KCG M D   +F  M E RD V WN M+ GY+  
Sbjct: 748 GVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRE-RDVVLWNMMLKGYVQL 806

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
            L  +A  L     + G R D F+   +L+  + V   E                    G
Sbjct: 807 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDE--------------------G 846

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
             L D         YA++        +V+ WN  +S     G    A+  F  M      
Sbjct: 847 KWLADQVQA-----YAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNID 901

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
            D VT + VL+A +    ++ G K    ++   GL   +   + +V++  + G      E
Sbjct: 902 YDAVTLLVVLAAVAGTDDLELG-KQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFARE 960

Query: 720 FINKMP----ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM 761
             N M     I+ NS+I          ++C ++ L  ++ N+  ++
Sbjct: 961 VFNDMKHLDLISWNSMI----------SSCAQSSLEEESVNLFIDL 996



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 48/99 (48%)

Query: 2    KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
            +  +  H  ++K     D F+  +L+++Y + G++  A +LF +M  RN   W  ++ G 
Sbjct: 1225 EQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGL 1284

Query: 62   THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
               G + EA  +FK M   G   +R +   +L AC   G
Sbjct: 1285 AQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAG 1323



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 5/115 (4%)

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           +L    S   L  G   HA  V +    D  + + L+ MYSKCG +  A + FD  P R+
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686

Query: 627 VYSWNSMISGYA-----RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
           + +WN+++  YA       G+  + L LF  ++        +T   VL  C ++G
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSG 741


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1038

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 336/974 (34%), Positives = 543/974 (55%), Gaps = 55/974 (5%)

Query: 4    AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
             +  H   +K      V   NTLIN+Y + G +  A  LFD+MP RN VSW  ++SG   
Sbjct: 77   GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136

Query: 64   KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
             G+  E  + F++M   G   + + + S++ AC   G S F+ G+QVH  V KS    D 
Sbjct: 137  VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSG-SMFREGVQVHGFVAKSGLLSDV 195

Query: 124  LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
             VS  ++ +YG       C+R++FEE+  R+++SW S++  YS +G+   V  ++  M+ 
Sbjct: 196  YVSTAILHLYG-VYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRG 254

Query: 184  EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            EG    ++ NE +   +I++    +L    L +QI+  V K+GL S L V ++L+S F  
Sbjct: 255  EG----VECNENSMSLVISSC--GLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGN 308

Query: 244  LGNFYYARKIFEQMIQKNVVSMN------------------------------------- 266
            +GN  YA  IF Q+ +++ +S N                                     
Sbjct: 309  MGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTL 368

Query: 267  ----GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                G ++ ++ G+ +HG +++ G   +V V N L+ MYA  G  +++  VF+ M  KD 
Sbjct: 369  LSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDL 428

Query: 323  VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
            +SWN++++    +G   +A+   C+M R G   +  +  S L++C S  +   G+ +HG 
Sbjct: 429  ISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGL 488

Query: 383  GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
             +  GL  +  + NAL+S+Y   G +S   +V   MP  D V+WN++IG +A++E    +
Sbjct: 489  VVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENED-PDK 547

Query: 443  AVKYYLDMRRAGWSPNGVTFINILAAA-SSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
            A+  +  +R  G S N +T +++L+A      + + G  +HA ++     ++  ++N+L+
Sbjct: 548  ALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLI 607

Query: 502  SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
            + Y KCG++   + +F  + + R  ++WN++++   H+    + + LV  M   G  LD 
Sbjct: 608  TMYAKCGDLSSSQDLFNGL-DNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQ 666

Query: 562  FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
            F+F+  LSA A +A LE G ++H   V+   E D  I +A  DMYSKCG I    +    
Sbjct: 667  FSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPP 726

Query: 622  MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
               R++ SWN +IS   RHG+ ++    F +M   G  P HVTFV +L+ACSH GLVD+G
Sbjct: 727  SVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQG 786

Query: 682  FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACC 741
              ++  +++ +GL P +E   C++DLLGR+G L + E FI+KMP+ PN L+WR++L +C 
Sbjct: 787  LAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASC- 845

Query: 742  RANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA 801
                R  + GRKAA  L ++EP++   +VL +NM+A+ G+WEDV   RK M    +KK+ 
Sbjct: 846  -KIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQ 904

Query: 802  GCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKE 861
             CSWV +KD V  F  GD +HP+   IY KL+++ + ++++GYV  T  AL D + E KE
Sbjct: 905  ACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKE 964

Query: 862  DLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRF 920
              +  HSE++A+A+ L    +   +RI KNLR+C DCHS +KF+S+++GR IVLRD  RF
Sbjct: 965  HNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRF 1024

Query: 921  HHFNDGKCSCGDYW 934
            HHF  G CSC DYW
Sbjct: 1025 HHFESGLCSCKDYW 1038



 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 168/620 (27%), Positives = 306/620 (49%), Gaps = 26/620 (4%)

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL--FSRMQREGFRYSLKPNEYT 196
           +  C  R+ EE E + +I W+   S+       +S F    FS++ RE    +L      
Sbjct: 28  TLQCLERVEEE-EGKKVIRWSGCFSLSDHWNPELSCFDQTGFSQITRETTGRALHALCVK 86

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYV------GSALVSGFARLGNFYYA 250
               ++  +++ L   Y        VK A  L D          + ++SG  R+G +   
Sbjct: 87  GLVRLSVLHTNTLINMY---TKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEG 143

Query: 251 RKIFEQM----IQKNVVSMNGLME--GR-----RKGKEVHGYLIRSGLFDMVAVGNGLVN 299
            + F++M    I+ +   +  L+   GR     R+G +VHG++ +SGL   V V   +++
Sbjct: 144 MEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILH 203

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
           +Y   G +  SR VF  M  ++ VSW +++ G    G  EE I  + +MR +G+  +  S
Sbjct: 204 LYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENS 263

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           +   +SSC  L    LG+QI G+ +K GL+S ++V N+L+S++ + G +     +F  + 
Sbjct: 264 MSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQIS 323

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
           E D +SWNS++ A+A +   + E+ + +  MRR     N  T   +L+        K G 
Sbjct: 324 ERDTISWNSIVAAYAQN-GHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGR 382

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
            +H  V+K    +   + N LL  Y   G  ++ + +F +M   +D +SWNS+++ ++++
Sbjct: 383 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPT-KDLISWNSLMASFVND 441

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
                A+ ++  M++ G+ +++ TF + L+AC S    ++G  +H   V + L  + +IG
Sbjct: 442 GRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIG 501

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           +ALV MY K G +  + R    MP R+V +WN++I GYA +   DKAL  F  ++++G  
Sbjct: 502 NALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVS 561

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
            +++T V VLSAC   G + E  K   +     G        + ++ +  + G+L   ++
Sbjct: 562 ANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 621

Query: 720 FINKMPITPNSLIWRTVLGA 739
             N +    + + W  +L A
Sbjct: 622 LFNGLD-NRSIITWNAILAA 640



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 44/99 (44%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H   +K GF  D F+ N   ++Y + G++    K+     +R+  SW  ++S  
Sbjct: 683 EEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISAL 742

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   E C+ F EM+  G         S+L AC   G
Sbjct: 743 GRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGG 781


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 333/958 (34%), Positives = 537/958 (56%), Gaps = 55/958 (5%)

Query: 20   VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
            +F  NTLIN+Y + G++  A  +FDEM  RN  SW+ ++SGY   G+  EA  +F +M  
Sbjct: 779  IFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWG 838

Query: 80   AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
             G   N + + S++ AC   G    + G QVH  V+K+    D  V   L+  YGS +  
Sbjct: 839  LGVEPNGFMVASLITACSRSGYMADE-GFQVHGFVVKTGILGDVYVGTALVHFYGS-IGL 896

Query: 140  TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
               A+++FEE+   +++SW S++  YS  G+   V  ++ RM++EG    +  N+ TF +
Sbjct: 897  VYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG----VSGNQNTFAT 952

Query: 200  LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
            + ++    +L    L  Q+L  + + G    + V ++L+S F+   +   A  +F+ M +
Sbjct: 953  VTSSC--GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNE 1010

Query: 260  KNVVSMNGLM-----------------------------------------EGRRKGKEV 278
             +++S N ++                                         +  + G+ +
Sbjct: 1011 CDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGI 1070

Query: 279  HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
            HG +++ GL   V + N L+ +Y++ G  +D+  VF+ M  +D +SWN+M++   Q+G  
Sbjct: 1071 HGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKC 1130

Query: 339  EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
             + +     + + G + ++ +  S L++C++   ++  + +H   +  G    + V NAL
Sbjct: 1131 LDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNAL 1190

Query: 399  LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
            +++Y   G +    KV   MP+ D+V+WN++IG  A++E   +EAVK Y  +R  G   N
Sbjct: 1191 VTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEE-PNEAVKAYKLIREKGIPAN 1249

Query: 459  GVTFINILAAASSFS-MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
             +T +++L A S+   + K G  +HA ++     ++  ++N+L++ Y KCG+++    IF
Sbjct: 1250 YITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIF 1309

Query: 518  ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
              +   +  ++WN+M++   H+    +A+ +   M   G  LD F+F+  L+A A++A L
Sbjct: 1310 DGLG-NKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVL 1368

Query: 578  ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
            E G ++H   ++   E D+ + +A +DMY KCG +    +       R+  SWN +IS +
Sbjct: 1369 EEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAF 1428

Query: 638  ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
            ARHG   KA   F +M   GP PDHVTFV +LSAC+H GLVDEG  ++ SM++ +G+ P 
Sbjct: 1429 ARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPG 1488

Query: 698  LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
            +E   C++DLLGR+G L   E FI +MP+ PN L WR++L A CR +    EL RK A  
Sbjct: 1489 IEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAA-CRIH-GNLELARKTAEH 1546

Query: 758  LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
            L E++P +   YVL +N+ A+ GKWEDV   RK M    +KK+  CSWV +KD VH F  
Sbjct: 1547 LLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGM 1606

Query: 818  GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL 877
            G++ HP+   I  KL EL +  ++AGYVP T FAL D++ E KE  +  HSE++A+AF L
Sbjct: 1607 GEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGL 1666

Query: 878  TRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
                +   +RI KNLRVCGDCHS +KF+S IVGR+IVLRD  RFHHF+ GKCSCGDYW
Sbjct: 1667 INTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724



 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 181/537 (33%), Positives = 302/537 (56%), Gaps = 5/537 (0%)

Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
           + +++G  +H +LI +G    + +   L+  Y K G +  +R+VF  M  +  VSW  M+
Sbjct: 44  KAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMV 103

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
           SG  QNG +E+A + F  MR  G+ ++ F+  S L +C SL  + +G Q+ G   K    
Sbjct: 104 SGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFV 163

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
            ++ V +AL+  ++  G +     +F  M E D VSWN++IG +A  +    ++   +  
Sbjct: 164 ENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYA-VQGFADDSFCMFRS 222

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M R G  P+  T  ++L A++      + +Q+H  + +    +   +   L++ Y K G 
Sbjct: 223 MLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGS 282

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLP-KAMNLVWFMMQRGQRLDHFTFATVL 568
           +   + +   M  ++D  S  ++I+GY H  +    A++L   M Q    +D     ++L
Sbjct: 283 LRSAKDLRKGML-KKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSML 341

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
           + CA++A+   G ++HA  ++    +DV +G+AL+DMY+K G I+ A R FD M  +NV 
Sbjct: 342 NICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVI 401

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           SW S+ISGYA+HG+G  A++L+ +M+  G  P+ VTF+ +L ACSH GL  EG + F +M
Sbjct: 402 SWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNM 461

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT 748
              Y + P+ E +SCMVDL  R G L++    + K+ I  N+ +W  +LGA         
Sbjct: 462 VNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYG--YM 519

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSW 805
            LG++AA+ LF M+P+N+VNYV+LA++Y++ G W+D  K RK M+E   KK AG S+
Sbjct: 520 SLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSF 576



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 182/685 (26%), Positives = 323/685 (47%), Gaps = 67/685 (9%)

Query: 8    HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
            H  ++K G   DV++   L++ Y  +G + +A KLF+EMPD N VSW  ++ GY+  G  
Sbjct: 869  HGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNP 928

Query: 68   NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
             E   +++ M + G   N+    +V  +C          G QV   +++        V+N
Sbjct: 929  GEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQ--VLGYQVLGHIIQYGFEDSVSVAN 986

Query: 128  VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG---DTISVFKLFSRMQRE 184
             LI+M+ S   S + A  +F+ +   D+ISWN++IS Y+  G   +++  F     +  E
Sbjct: 987  SLISMFSS-FSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNE 1045

Query: 185  GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                +L        S+    +   + G         +V K GL S++ + + L++ ++  
Sbjct: 1046 TNSTTLSSLLSVCSSVDNLKWGRGIHG---------LVVKLGLDSNVCICNTLLTLYSEA 1096

Query: 245  GNFYYARKIFEQMIQKNVVSMNGLM----------------------------------- 269
            G    A  +F+ M +++++S N +M                                   
Sbjct: 1097 GRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASAL 1156

Query: 270  ------EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                  E   + K VH  +I +G  D + VGN LV MY K G + +++ V + M   D V
Sbjct: 1157 AACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRV 1216

Query: 324  SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML-GQQIHGE 382
            +WN +I G  +N    EA+  +  +R  G+ ++  +++S L +C++   ++  G  IH  
Sbjct: 1217 TWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAH 1276

Query: 383  GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
             +  G +SD  V N+L+++YA  G L+    +F  +     ++WN+++ A A       E
Sbjct: 1277 IVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANA-HHGCGEE 1335

Query: 443  AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
            A+K + +MR  G + +  +F   LAA ++ ++ + G Q+H  VIK    ++  + NA + 
Sbjct: 1336 ALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMD 1395

Query: 503  CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
             YGKCGEM D  K+  +    R  +SWN +IS +  +    KA      M++ G + DH 
Sbjct: 1396 MYGKCGEMHDVLKMLPQ-PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHV 1454

Query: 563  TFATVLSACASVATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRF 618
            TF ++LSAC     ++ G+  +    R   EF V  G      ++D+  + GR+ +A  F
Sbjct: 1455 TFVSLLSACNHGGLVDEGLAYYDSMTR---EFGVFPGIEHCVCIIDLLGRSGRLSHAEGF 1511

Query: 619  FDLMPV-RNVYSWNSMISGYARHGH 642
               MPV  N  +W S+++    HG+
Sbjct: 1512 IKEMPVPPNDLAWRSLLAACRIHGN 1536



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 151/514 (29%), Positives = 266/514 (51%), Gaps = 9/514 (1%)

Query: 275  GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            GK +H + I   +   +   N L+NMY+K G I+ +R VF  M  ++  SW+TM+SG  +
Sbjct: 763  GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822

Query: 335  NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM-LGQQIHGEGLKLGLDSDVS 393
             G YEEA+  FC M   G+  + F + S +++C+  G++   G Q+HG  +K G+  DV 
Sbjct: 823  VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVY 882

Query: 394  VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
            V  AL+  Y   G +    K+F  MP+H+ VSW S++  ++DS     E +  Y  MR+ 
Sbjct: 883  VGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDS-GNPGEVLNVYQRMRQE 941

Query: 454  GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
            G S N  TF  + ++        LG+QV   +I+Y   +  ++ N+L+S +     +++ 
Sbjct: 942  GVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEA 1001

Query: 514  EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
              +F  M+E  D +SWN+MIS Y H+ L  +++    +M       +  T +++LS C+S
Sbjct: 1002 CYVFDHMNE-CDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSS 1060

Query: 574  VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
            V  L+ G  +H   V+  L+ +V I + L+ +YS+ GR + A   F  M  R++ SWNSM
Sbjct: 1061 VDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSM 1120

Query: 634  ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
            ++ Y + G     L + +++   G + +HVTF   L+ACS+   + E  K   ++  V G
Sbjct: 1121 MACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES-KIVHALIIVAG 1179

Query: 694  LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
                L   + +V + G+ G + + ++ +  MP  P+ + W  ++G    A   +     K
Sbjct: 1180 FHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG--HAENEEPNEAVK 1236

Query: 754  AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
            A  ++   E     NY+ + ++  +    +D+ K
Sbjct: 1237 AYKLI--REKGIPANYITMVSVLGACSAPDDLLK 1268



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 135/514 (26%), Positives = 234/514 (45%), Gaps = 56/514 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K   L H  ++ +GF  D+ L   LI  YV+VGD+ +A  +FD MP+R+ VSW  +VSGY
Sbjct: 47  KQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGY 106

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G   +A  +F +M   G   N++  GS LRAC          G+QV   + K     
Sbjct: 107 SQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSL--RCLDMGIQVQGCIQKGRFVE 164

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V + L+  +  C +  D A  +F  +  RD++SWN++I  Y+ +G     F +F  M
Sbjct: 165 NLFVKSALVDFHSKCGKMED-ASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSM 223

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            R G    L P+ YT GS++ A  S+   G  +  QI  ++ + G  S   V   L++ +
Sbjct: 224 LRGG----LVPDCYTLGSVLRA--SAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAY 277

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------- 274
           A+ G+   A+ + + M++K++ S   L+ G                              
Sbjct: 278 AKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVIL 337

Query: 275 ---------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                          G ++H + ++      VA+GN L++MYAK G I+D++  F  M  
Sbjct: 338 CSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEE 397

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           K+ +SW ++ISG  ++G    A+  +  M   G   ++ + +S L +C+  G    G + 
Sbjct: 398 KNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCEC 457

Query: 380 HGEGL-KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFA--D 435
               + K  +       + ++ L+A  G L     +   +  +H+   W +++GA +   
Sbjct: 458 FNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYG 517

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
             +L  EA     +M+    S N V   +I +AA
Sbjct: 518 YMSLGKEAASNLFNMQPEN-SVNYVVLASIYSAA 550



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 170/392 (43%), Gaps = 57/392 (14%)

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           ++ IL         K GH +H  +I     ++  +   L+  Y K G++     +F  M 
Sbjct: 33  YLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMP 92

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
           E R  VSW +M+SGY  N    KA  L   M   G + + FT+ + L AC S+  L+ G+
Sbjct: 93  E-RSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGI 151

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           +V  C  +     ++ + SALVD +SKCG+++ AS  F  M  R+V SWN+MI GYA  G
Sbjct: 152 QVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQG 211

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL--- 698
             D +  +F  M   G +PD  T   VL A +  G            +Q++G+I QL   
Sbjct: 212 FADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGG-------GLIIANQIHGIITQLGYG 264

Query: 699 --------------------------------EQFSCMVDLLGRAGE----LDKIEEF-- 720
                                           + FS    + G A E    +D ++ F  
Sbjct: 265 SYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKE 324

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY-VLLANMYASG 779
           +N+M I  + +I  ++L  C  AN     LG +      + +P   V     L +MYA  
Sbjct: 325 MNQMNIGMDDVILCSMLNIC--ANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKS 382

Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
           G+ ED  +A   M+E  V      SW ++  G
Sbjct: 383 GEIEDAKRAFDEMEEKNV-----ISWTSLISG 409



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 159/355 (44%), Gaps = 45/355 (12%)

Query: 3    DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
            ++K+ H  I+  GF   + + N L+ +Y ++G +  A K+   MP  + V+W  ++ G+ 
Sbjct: 1167 ESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHA 1226

Query: 63   HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSG-FKFGMQVHCLVLKSNQTF 121
                 NEA K +K +   G   N   + SVL AC    P    K GM +H  ++ +    
Sbjct: 1227 ENEEPNEAVKAYKLIREKGIPANYITMVSVLGACS--APDDLLKHGMPIHAHIVLTGFES 1284

Query: 122  DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
            D  V N LI MY  C +  + +  IF+ +  +  I+WN++++  +  G      K+F  M
Sbjct: 1285 DDYVKNSLITMYAKCGD-LNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEM 1343

Query: 182  QREGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
            +  G    +  ++++F G L   A  +VL      QQ+  +V K G  SDL+V +A +  
Sbjct: 1344 RNVG----VNLDQFSFSGGLAATANLAVLEEG---QQLHGLVIKLGFESDLHVTNAAMDM 1396

Query: 241  FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
            + + G  +   K+  Q I ++ +S                              N L++ 
Sbjct: 1397 YGKCGEMHDVLKMLPQPINRSRLSW-----------------------------NILISA 1427

Query: 301  YAKCGTIDDSRSVFRFMI----GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
            +A+ G    +R  F  M+      D V++ +++S  +  G  +E +  + +M R+
Sbjct: 1428 FARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTRE 1482



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 125/255 (49%), Gaps = 6/255 (2%)

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINI-LAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
           L  +  K +L  +   +    +  +N  L   S  +    G  +HA  I  +V       
Sbjct: 723 LDGDIAKVFLQQQHTDYGIRCLNAVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQT 782

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ 557
           N L++ Y K G ++    +F  M   R+E SW++M+SGY+   L  +A+ L   M   G 
Sbjct: 783 NTLINMYSKFGNIEHARYVFDEM-RHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGV 841

Query: 558 RLDHFTFATVLSACASVATL-ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
             + F  A++++AC+    + + G +VH   V+  +  DV +G+ALV  Y   G +  A 
Sbjct: 842 EPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQ 901

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
           + F+ MP  NV SW S++ GY+  G+  + L ++ +M+ +G   +  TF  V S+C   G
Sbjct: 902 KLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC---G 958

Query: 677 LVDEGFKHFKSMSQV 691
           L+++    ++ +  +
Sbjct: 959 LLEDQVLGYQVLGHI 973



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 13/282 (4%)

Query: 2    KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
            K     H  I+  GF  D ++ N+LI +Y + GDL S++ +FD + +++ ++W  +V+  
Sbjct: 1268 KHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAAN 1327

Query: 62   THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
             H G   EA K+F EM   G  L++++    L A         + G Q+H LV+K     
Sbjct: 1328 AHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAV--LEEGQQLHGLVIKLGFES 1385

Query: 122  DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
            D  V+N  + MYG C E  D  + + + I  R  +SWN +IS +++ G      + F  M
Sbjct: 1386 DLHVTNAAMDMYGKCGEMHDVLKMLPQPI-NRSRLSWNILISAFARHGCFQKARETFHEM 1444

Query: 182  QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             + G     KP+  TF SL++A     L     L    +M ++ G+   +     ++   
Sbjct: 1445 LKLG----PKPDHVTFVSLLSACNHGGLVDEG-LAYYDSMTREFGVFPGIEHCVCIIDLL 1499

Query: 242  ARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVHGYL 282
             R G   +A    ++M +  N ++   L+   R    +HG L
Sbjct: 1500 GRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACR----IHGNL 1537



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 88/171 (51%), Gaps = 3/171 (1%)

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           L   + + +   G  +HA  +   +   +   + L++MYSK G I++A   FD M  RN 
Sbjct: 751 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG-LVDEGFKHFK 686
            SW++M+SGY R G  ++A+ LF QM   G  P+      +++ACS +G + DEGF+   
Sbjct: 811 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 870

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
            + +  G++  +   + +V   G  G +   ++   +MP   N + W +++
Sbjct: 871 FVVKT-GILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLM 919



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 2/182 (1%)

Query: 558 RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
           RLD   +  +L  C      ++G  +H   +      D+ + + L+  Y K G +  A  
Sbjct: 27  RLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARN 86

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGL 677
            FD MP R+V SW +M+SGY+++G  +KA  LFS M+  G   +  T+   L AC+    
Sbjct: 87  VFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRC 146

Query: 678 VDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
           +D G +  +   Q    +  L   S +VD   + G+++        M +  + + W  ++
Sbjct: 147 LDMGIQ-VQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTM-MERDVVSWNAMI 204

Query: 738 GA 739
           G 
Sbjct: 205 GG 206


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 323/872 (37%), Positives = 498/872 (57%), Gaps = 60/872 (6%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR 168
           ++H  ++++    D  +SN+LI MY  C    D A ++F+E+  RD+ISWNS+IS Y+Q+
Sbjct: 48  RIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLD-AHQVFKEMPRRDVISWNSLISCYAQQ 106

Query: 169 GDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAG 226
           G     F+LF  MQ  GF     PN+ T+ S++TA YS   + +G  +  QI+    KAG
Sbjct: 107 GFKKKAFQLFEEMQNAGF----IPNKITYISILTACYSPAELENGKKIHSQII----KAG 158

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM----------------- 269
              D  V ++L+S + + G+   AR++F  +  ++VVS N ++                 
Sbjct: 159 YQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFG 218

Query: 270 ----EG--------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
               EG                      +GK +H   +  GL   + VG  LV M  +CG
Sbjct: 219 QMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCG 278

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            +D ++  F+ +  +D V +N +I+ L Q+G   EA   +  MR DG+  +  + +S L+
Sbjct: 279 DVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILN 338

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           +C++   +  G+ IH    + G  SDV + NAL+S+YA  G L +  ++F+ MP+ D +S
Sbjct: 339 ACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLIS 398

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           WN++I  +A  E    EA++ Y  M+  G  P  VTF+++L+A ++ S    G  +H  +
Sbjct: 399 WNAIIAGYARREDR-GEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDI 457

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
           ++  + +   + NAL++ Y +CG + + + +F   ++ RD +SWNSMI+G+  +     A
Sbjct: 458 LRSGIKSNGHLANALMNMYRRCGSLMEAQNVF-EGTQARDVISWNSMIAGHAQHGSYETA 516

Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
             L   M       D+ TFA+VLS C +   LE G ++H     + L+ DV +G+AL++M
Sbjct: 517 YKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINM 576

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG-PLPDHVT 664
           Y +CG +  A   F  +  R+V SW +MI G A  G   KA+ LF QM+ +G   PD  T
Sbjct: 577 YIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGST 636

Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           F  +LSAC+HAGLV EG++ F SM   YG++P +E + C+V LLGRA    + E  IN+M
Sbjct: 637 FTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQM 696

Query: 725 PITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           P  P++ +W T+LGAC    N     L   AAN   ++  +N   Y+LL+N+YA+ G+W+
Sbjct: 697 PFPPDAAVWETLLGACRIHGN---IALAEHAANNALKLNARNPAVYILLSNVYAAAGRWD 753

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
           DVAK R+ M+   ++KE G SW+ + + +H F+A D SHPE   IY +LK L+ +M +AG
Sbjct: 754 DVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAG 813

Query: 844 YVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFK 902
           Y P T+  L DL    +E  +  HSE++A+A+ L +     PIRI KNLR+CGDCH+A K
Sbjct: 814 YFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASK 873

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           FISK+VGREI+ RDSNRFH F +GKCSC DYW
Sbjct: 874 FISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905



 Score =  296 bits (759), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 192/689 (27%), Positives = 339/689 (49%), Gaps = 65/689 (9%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           +AK  H Q+++ G   D+FL N LIN+YV+   +  A ++F EMP R+ +SW  ++S Y 
Sbjct: 45  EAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYA 104

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            +G   +A ++F+EM  AGF+ N+    S+L AC    P+  + G ++H  ++K+    D
Sbjct: 105 QQGFKKKAFQLFEEMQNAGFIPNKITYISILTACY--SPAELENGKKIHSQIIKAGYQRD 162

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V N L++MYG C +    AR++F  I  RD++S+N+++ +Y+Q+        LF +M 
Sbjct: 163 PRVQNSLLSMYGKCGDLPR-ARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMS 221

Query: 183 REGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            EG    + P++ T+ +L+ A    S+L      ++I  +  + GL SD+ VG+ALV+  
Sbjct: 222 SEG----ISPDKVTYINLLDAFTTPSMLDEG---KRIHKLTVEEGLNSDIRVGTALVTMC 274

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLM-------------------------------- 269
            R G+   A++ F+ +  ++VV  N L+                                
Sbjct: 275 VRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYL 334

Query: 270 ---------EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                    +    GK +H ++   G    V +GN L++MYA+CG +  +R +F  M  +
Sbjct: 335 SILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKR 394

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D +SWN +I+G  +     EA+  +  M+ +G+     + +  LS+CA+      G+ IH
Sbjct: 395 DLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIH 454

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
            + L+ G+ S+  ++NAL+++Y   G L     VF      D +SWNS+I   A   +  
Sbjct: 455 EDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYE 514

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
           + A K + +M+     P+ +TF ++L+   +    +LG Q+H ++ +  +  +  + NAL
Sbjct: 515 T-AYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNAL 573

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR-L 559
           ++ Y +CG + D   +F  + + RD +SW +MI G        KA+ L W M   G R  
Sbjct: 574 INMYIRCGSLQDARNVFHSL-QHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPP 632

Query: 560 DHFTFATVLSACASVATLERGMEVHAC-----GVRACLEFDVVIGSALVDMYSKCGRIDY 614
           D  TF ++LSAC     +  G ++ +      GV   +E        LV +  +  R   
Sbjct: 633 DGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEH----YGCLVGLLGRARRFQE 688

Query: 615 ASRFFDLMPV-RNVYSWNSMISGYARHGH 642
           A    + MP   +   W +++     HG+
Sbjct: 689 AETLINQMPFPPDAAVWETLLGACRIHGN 717



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 161/572 (28%), Positives = 288/572 (50%), Gaps = 43/572 (7%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           + K +H  ++ +G+   + + N L+NMY KC ++ D+  VF+ M  +D +SWN++IS   
Sbjct: 45  EAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYA 104

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           Q G  ++A   F  M+  G + +  + IS L++C S   +  G++IH + +K G   D  
Sbjct: 105 QQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPR 164

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V N+LLS+Y   G L R  +VF  +   D VS+N+++G +A  +A V E +  +  M   
Sbjct: 165 VQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYA-QKAYVKECLGLFGQMSSE 223

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G SP+ VT+IN+L A ++ SM   G ++H   ++  + ++  +  AL++   +CG++D  
Sbjct: 224 GISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSA 283

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
           ++ F  +++ RD V +N++I+    +    +A    + M   G  L+  T+ ++L+AC++
Sbjct: 284 KQAFKGIAD-RDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACST 342

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
              LE G  +H+         DV IG+AL+ MY++CG +  A   F  MP R++ SWN++
Sbjct: 343 SKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAI 402

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-----------HAGLVDEGF 682
           I+GYAR     +A+ L+ QM+ +G  P  VTF+ +LSAC+           H  ++  G 
Sbjct: 403 IAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGI 462

Query: 683 KH-------FKSMSQVYGLIPQLEQ------------FSCMVDLLGRAGELDKIEEFINK 723
           K          +M +  G + + +             ++ M+    + G  +   +   +
Sbjct: 463 KSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQE 522

Query: 724 M---PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY-VLLANMYASG 779
           M    + P+++ + +VL  C   N    ELG++    + E   Q  VN    L NMY   
Sbjct: 523 MQNEELEPDNITFASVLSGC--KNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRC 580

Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
           G  +D      +++  +V      SW  M  G
Sbjct: 581 GSLQDARNVFHSLQHRDV-----MSWTAMIGG 607



 Score =  229 bits (585), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 156/576 (27%), Positives = 284/576 (49%), Gaps = 55/576 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ K  H QI+K G+  D  + N+L+++Y + GDL  A ++F  +  R+ VS+  ++  Y
Sbjct: 145 ENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLY 204

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
             K    E   +F +M   G   ++    ++L A     PS    G ++H L ++     
Sbjct: 205 AQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTT--PSMLDEGKRIHKLTVEEGLNS 262

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V   L+ M   C +  D A++ F+ I  RD++ +N++I+  +Q G  +  F+ + RM
Sbjct: 263 DIRVGTALVTMCVRCGD-VDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRM 321

Query: 182 QREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           + +G    +  N  T+ S++ A + S  L    L+    + + + G  SD+ +G+AL+S 
Sbjct: 322 RSDG----VALNRTTYLSILNACSTSKALEAGKLIH---SHISEDGHSSDVQIGNALISM 374

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG--RRK------------------------ 274
           +AR G+   AR++F  M +++++S N ++ G  RR+                        
Sbjct: 375 YARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTF 434

Query: 275 ---------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                          GK +H  ++RSG+     + N L+NMY +CG++ ++++VF     
Sbjct: 435 LHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQA 494

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           +D +SWN+MI+G  Q+G YE A   F  M+ + L   N +  S LS C +   + LG+QI
Sbjct: 495 RDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQI 554

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           HG   + GL  DV++ NAL+++Y   G L     VF  +   D +SW ++IG  AD +  
Sbjct: 555 HGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCAD-QGE 613

Query: 440 VSEAVKYYLDMRRAGW-SPNGVTFINILAAASSFSMGKLGHQVHAQV-IKYNVANETTIE 497
             +A++ +  M+  G+  P+G TF +IL+A +   +   G+Q+ + +  +Y V       
Sbjct: 614 DMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHY 673

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
             L+   G+     + E +  +M    D   W +++
Sbjct: 674 GCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLL 709



 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 205/388 (52%), Gaps = 4/388 (1%)

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           + ++ L +C     +   ++IH + ++ G+  D+ +SN L+++Y     +    +VF  M
Sbjct: 29  TYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
           P  D +SWNS+I  +A  +    +A + + +M+ AG+ PN +T+I+IL A  S +  + G
Sbjct: 89  PRRDVISWNSLISCYA-QQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
            ++H+Q+IK     +  ++N+LLS YGKCG++    ++FA +S  RD VS+N+M+  Y  
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISP-RDVVSYNTMLGLYAQ 206

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
              + + + L   M   G   D  T+  +L A  + + L+ G  +H   V   L  D+ +
Sbjct: 207 KAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRV 266

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
           G+ALV M  +CG +D A + F  +  R+V  +N++I+  A+HGH  +A   + +M+ DG 
Sbjct: 267 GTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGV 326

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
             +  T++ +L+ACS +  ++ G K   S     G    ++  + ++ +  R G+L K  
Sbjct: 327 ALNRTTYLSILNACSTSKALEAG-KLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAR 385

Query: 719 EFINKMPITPNSLIWRTVLGACCRANCR 746
           E    MP   + + W  ++    R   R
Sbjct: 386 ELFYTMP-KRDLISWNAIIAGYARREDR 412



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 124/258 (48%), Gaps = 9/258 (3%)

Query: 555 RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
           R    D  T+  +L  C     L     +HA  V A +  D+ + + L++MY KC  +  
Sbjct: 21  RPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLD 80

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
           A + F  MP R+V SWNS+IS YA+ G   KA  LF +M+  G +P+ +T++ +L+AC  
Sbjct: 81  AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS 140

Query: 675 AGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI- 732
              ++ G K H + +   Y   P+++  + ++ + G+ G+L +  +      I+P  ++ 
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDPRVQ--NSLLSMYGKCGDLPRARQVF--AGISPRDVVS 196

Query: 733 WRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAM 792
           + T+LG   +    K  LG     M  E    + V Y+ L + + +    ++  +  K  
Sbjct: 197 YNTMLGLYAQKAYVKECLGL-FGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLT 255

Query: 793 KEAEVKKE--AGCSWVTM 808
            E  +  +   G + VTM
Sbjct: 256 VEEGLNSDIRVGTALVTM 273


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 337/895 (37%), Positives = 504/895 (56%), Gaps = 60/895 (6%)

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           ++R    S+L+ C +    G   G ++H  +  S    D  + N+LI+MY  C  +T+ A
Sbjct: 102 IHRQTYSSLLQLCIKHKNLGD--GERIHNHIKFSKIQPDIFMWNMLISMYAKC-GNTNSA 158

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           ++IF+E+  +D+ SWN ++  Y Q       F+L  +M ++G    +KP++YTF  ++ A
Sbjct: 159 KQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDG----VKPDKYTFVYMLNA 214

Query: 204 AYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALV----------------------- 238
              +  V  G  L   IL     AG  +DL+VG+AL+                       
Sbjct: 215 CADAKNVDKGGELFSLIL----NAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRD 270

Query: 239 --------SGFARLGNFYYARKIFEQM----IQKNVVSMNGLM------EGRRKGKEVHG 280
                   +G AR   F  A  +F+ M    +Q + V+   L+      E   +GK VH 
Sbjct: 271 LITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHA 330

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
            +   GL   + VG  L++MY KCG+++D+  VF  + G++ VSW  MI+G  Q+G  EE
Sbjct: 331 RMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEE 390

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A + F  M   G+  +  + +S L +C+    +  G+QIH   +K G  +D  V  ALLS
Sbjct: 391 AFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLS 450

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +YA  G L     VF  + + + V+WN++I A+   E     AV  +  + + G  P+  
Sbjct: 451 MYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKY-DNAVATFQALLKEGIKPDSS 509

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           TF +IL    S    +LG  V + +I+    ++  I NAL+S +  CG++     +F  M
Sbjct: 510 TFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDM 569

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
            ER D VSWN++I+G++ +     A +    M + G + D  TF  +L+ACAS   L  G
Sbjct: 570 PER-DLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEG 628

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
             +HA    A L+ DVV+G+ L+ MY+KCG ID A   F  +P +NVYSW SMI+GYA+H
Sbjct: 629 RRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQH 688

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
           G G +AL LF QM+ +G  PD +TFVG LSAC+HAGL+ EG  HF+SM   + + P++E 
Sbjct: 689 GRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKD-FNIEPRMEH 747

Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
           + CMVDL GRAG L +  EFINKM + P+S +W  +LGAC        EL  K A    E
Sbjct: 748 YGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGAC--QVHLDVELAEKVAQKKLE 805

Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           ++P +   YV+L+N+YA+ G W++V K RK M +  V K+ G SW+ +   VH+F + D+
Sbjct: 806 LDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDK 865

Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRN 880
           +HP+ + I+ +L  L+ +M+  GYVP T++ L D+E   KE  + +HSE++A+A+ L + 
Sbjct: 866 THPQIEEIHAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKT 925

Query: 881 SKL-PIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             L PI I KNLRVCGDCH+A K ISKI  R+I+ RDSNRFHHF DG CSCGD+W
Sbjct: 926 PPLTPIVISKNLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 229/474 (48%), Gaps = 53/474 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H ++ + G   ++++   L+++Y + G +  A ++F+ +  RN VSW  +++G+
Sbjct: 323 EQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGF 382

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   EA   F +M+ +G   NR    S+L AC    PS  K G Q+H  ++K+    
Sbjct: 383 AQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSR--PSALKQGRQIHDRIIKAGYIT 440

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V   L++MY  C    D AR +FE I  +++++WN++I+ Y Q     +    F  +
Sbjct: 441 DDRVRTALLSMYAKCGSLMD-ARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQAL 499

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            +EG    +KP+  TF S++    S       L + + +++ +AG  SDL++ +ALVS F
Sbjct: 500 LKEG----IKPDSSTFTSILNVCKSP--DALELGKWVQSLIIRAGFESDLHIRNALVSMF 553

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLM-------------------------------- 269
              G+   A  +F  M ++++VS N ++                                
Sbjct: 554 VNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFT 613

Query: 270 ---------EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                    E   +G+ +H  +  + L   V VG GL++MY KCG+IDD+  VF  +  K
Sbjct: 614 GLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKK 673

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           +  SW +MI+G  Q+G  +EA+  FC M+++G+     + +  LS+CA  G I  G   H
Sbjct: 674 NVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLH-H 732

Query: 381 GEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            E +K   ++  +     ++ L+  AG L   ++    M  + D   W +++GA
Sbjct: 733 FESMKDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGA 786



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 188/366 (51%), Gaps = 2/366 (0%)

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
           F+  K++   N  ++ L + G   EA++   ++    +     +  S L  C     +  
Sbjct: 63  FVDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGD 122

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G++IH       +  D+ + N L+S+YA  G  +   ++F  MP+ D  SWN ++G +  
Sbjct: 123 GERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQ 182

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
                 EA + +  M + G  P+  TF+ +L A +       G ++ + ++      +  
Sbjct: 183 HRRY-EEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLF 241

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           +  AL++ + KCG +DD  K+F  +  RRD ++W SMI+G   +    +A NL   M + 
Sbjct: 242 VGTALINMHIKCGGVDDALKVFNNLP-RRDLITWTSMITGLARHRQFKQACNLFQVMEEE 300

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G + D   F ++L AC     LE+G  VHA      L+ ++ +G+AL+ MY+KCG ++ A
Sbjct: 301 GVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDA 360

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
              F+L+  RNV SW +MI+G+A+HG  ++A   F++M   G  P+ VTF+ +L ACS  
Sbjct: 361 LEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRP 420

Query: 676 GLVDEG 681
             + +G
Sbjct: 421 SALKQG 426


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 329/954 (34%), Positives = 533/954 (55%), Gaps = 55/954 (5%)

Query: 20   VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
            +F  NTLIN+Y + G++  A  +FDEM  RN  SW+ ++SGY   G+  EA  +F +M  
Sbjct: 129  IFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWG 188

Query: 80   AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
             G   N + + S++ AC   G    + G QVH  V+K+    D  V   L+  YGS +  
Sbjct: 189  LGVEPNGFMVASLITACSRSGYMADE-GFQVHGFVVKTGILGDVYVGTALVHFYGS-IGL 246

Query: 140  TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
               A+++FEE+   +++SW S++  YS  G+   V  ++ RM++EG    +  N+ TF +
Sbjct: 247  VYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG----VSGNQNTFAT 302

Query: 200  LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
            + ++    +L    L  Q+L  + + G    + V ++L+S F+   +   A  +F+ M +
Sbjct: 303  VTSSC--GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNE 360

Query: 260  KNVVSMNGLM-----------------------------------------EGRRKGKEV 278
             +++S N ++                                         +  + G+ +
Sbjct: 361  CDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGI 420

Query: 279  HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
            HG +++ GL   V + N L+ +Y++ G  +D+  VF+ M  +D +SWN+M++   Q+G  
Sbjct: 421  HGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKC 480

Query: 339  EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
             + +     + + G + ++ +  S L++C++   ++  + +H   +  G    + V NAL
Sbjct: 481  LDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNAL 540

Query: 399  LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
            +++Y   G +    KV   MP+ D+V+WN++IG  A++E   +EAVK Y  +R  G   N
Sbjct: 541  VTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEE-PNEAVKAYKLIREKGIPAN 599

Query: 459  GVTFINILAAASSFS-MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
             +T +++L A S+   + K G  +HA ++     ++  ++N+L++ Y KCG+++    IF
Sbjct: 600  YITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIF 659

Query: 518  ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
              +   +  ++WN+M++   H+    +A+ +   M   G  LD F+F+  L+A A++A L
Sbjct: 660  DGLG-NKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVL 718

Query: 578  ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
            E G ++H   ++   E D+ + +A +DMY KCG +    +       R+  SWN +IS +
Sbjct: 719  EEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAF 778

Query: 638  ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
            ARHG   KA   F +M   GP PDHVTFV +LSAC+H GLVDEG  ++ SM++ +G+ P 
Sbjct: 779  ARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPG 838

Query: 698  LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
            +E   C++DLLGR+G L   E FI +MP+ PN L WR++L A CR +    EL RK A  
Sbjct: 839  IEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAA-CRIH-GNLELARKTAEH 896

Query: 758  LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
            L E++P +   YVL +N+ A+ GKWEDV   RK M    +KK+  CSWV +KD VH F  
Sbjct: 897  LLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGM 956

Query: 818  GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL 877
            G++ HP+   I  KL EL +  ++AGYVP T FAL D++ E KE  +  HSE++A+AF L
Sbjct: 957  GEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGL 1016

Query: 878  TRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
                +   +RI KNLRVCGDCHS +KF+S IVGR+IVLRD  RFHHF+ GKCSC
Sbjct: 1017 INTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 182/682 (26%), Positives = 321/682 (47%), Gaps = 61/682 (8%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K G   DV++   L++ Y  +G + +A KLF+EMPD N VSW  ++ GY+  G  
Sbjct: 219 HGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNP 278

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            E   +++ M + G   N+    +V  +C          G QV   +++        V+N
Sbjct: 279 GEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQ--VLGYQVLGHIIQYGFEDSVSVAN 336

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI+M+ S   S + A  +F+ +   D+ISWN++IS Y+  G      + F  M+     
Sbjct: 337 SLISMFSS-FSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRH---- 391

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             L     +       +  S +      + I  +V K GL S++ + + L++ ++  G  
Sbjct: 392 --LHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRS 449

Query: 248 YYARKIFEQMIQKNVVSMNGLM-------------------------------------- 269
             A  +F+ M +++++S N +M                                      
Sbjct: 450 EDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAAC 509

Query: 270 ---EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
              E   + K VH  +I +G  D + VGN LV MY K G + +++ V + M   D V+WN
Sbjct: 510 SNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWN 569

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML-GQQIHGEGLK 385
            +I G  +N    EA+  +  +R  G+ ++  +++S L +C++   ++  G  IH   + 
Sbjct: 570 ALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVL 629

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G +SD  V N+L+++YA  G L+    +F  +     ++WN+++ A A       EA+K
Sbjct: 630 TGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAH-HGCGEEALK 688

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            + +MR  G + +  +F   LAA ++ ++ + G Q+H  VIK    ++  + NA +  YG
Sbjct: 689 IFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYG 748

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           KCGEM D  K+  +    R  +SWN +IS +  +    KA      M++ G + DH TF 
Sbjct: 749 KCGEMHDVLKMLPQ-PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFV 807

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDL 621
           ++LSAC     ++ G+  +    R   EF V  G      ++D+  + GR+ +A  F   
Sbjct: 808 SLLSACNHGGLVDEGLAYYDSMTR---EFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKE 864

Query: 622 MPV-RNVYSWNSMISGYARHGH 642
           MPV  N  +W S+++    HG+
Sbjct: 865 MPVPPNDLAWRSLLAACRIHGN 886



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 151/514 (29%), Positives = 266/514 (51%), Gaps = 9/514 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK +H + I   +   +   N L+NMY+K G I+ +R VF  M  ++  SW+TM+SG  +
Sbjct: 113 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 172

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM-LGQQIHGEGLKLGLDSDVS 393
            G YEEA+  FC M   G+  + F + S +++C+  G++   G Q+HG  +K G+  DV 
Sbjct: 173 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVY 232

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V  AL+  Y   G +    K+F  MP+H+ VSW S++  ++DS     E +  Y  MR+ 
Sbjct: 233 VGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDS-GNPGEVLNVYQRMRQE 291

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G S N  TF  + ++        LG+QV   +I+Y   +  ++ N+L+S +     +++ 
Sbjct: 292 GVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEA 351

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
             +F  M+E  D +SWN+MIS Y H+ L  +++    +M       +  T +++LS C+S
Sbjct: 352 CYVFDHMNE-CDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSS 410

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           V  L+ G  +H   V+  L+ +V I + L+ +YS+ GR + A   F  M  R++ SWNSM
Sbjct: 411 VDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSM 470

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           ++ Y + G     L + +++   G + +HVTF   L+ACS+   + E  K   ++  V G
Sbjct: 471 MACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES-KIVHALIIVAG 529

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
               L   + +V + G+ G + + ++ +  MP  P+ + W  ++G    A   +     K
Sbjct: 530 FHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG--HAENEEPNEAVK 586

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
           A  ++   E     NY+ + ++  +    +D+ K
Sbjct: 587 AYKLI--REKGIPANYITMVSVLGACSAPDDLLK 618



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 158/355 (44%), Gaps = 45/355 (12%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           ++K+ H  I+  GF   + + N L+ +Y ++G +  A K+   MP  + V+W  ++ G+ 
Sbjct: 517 ESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHA 576

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSG-FKFGMQVHCLVLKSNQTF 121
                NEA K +K +   G   N   + SVL AC    P    K GM +H  ++ +    
Sbjct: 577 ENEEPNEAVKAYKLIREKGIPANYITMVSVLGACS--APDDLLKHGMPIHAHIVLTGFES 634

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V N LI MY  C +  + +  IF+ +  +  I+WN++++  +  G      K+F  M
Sbjct: 635 DDYVKNSLITMYAKCGD-LNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEM 693

Query: 182 QREGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           +  G       ++++F G L   A  +VL      QQ+  +V K G  SDL+V +A +  
Sbjct: 694 RNVGVNL----DQFSFSGGLAATANLAVLEEG---QQLHGLVIKLGFESDLHVTNAAMDM 746

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
           + + G  +   K+  Q I ++ +S                              N L++ 
Sbjct: 747 YGKCGEMHDVLKMLPQPINRSRLSW-----------------------------NILISA 777

Query: 301 YAKCGTIDDSRSVFRFMI----GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           +A+ G    +R  F  M+      D V++ +++S  +  G  +E +  + +M R+
Sbjct: 778 FARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTRE 832



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 127/260 (48%), Gaps = 8/260 (3%)

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINI-LAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
           L  +  K +L  +   +    +  +N  L   S  +    G  +HA  I  +V       
Sbjct: 73  LDGDIAKVFLQQQHTDYGIRCLNAVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQT 132

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ 557
           N L++ Y K G ++    +F  M   R+E SW++M+SGY+   L  +A+ L   M   G 
Sbjct: 133 NTLINMYSKFGNIEHARYVFDEM-RHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGV 191

Query: 558 RLDHFTFATVLSACASVATL-ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
             + F  A++++AC+    + + G +VH   V+  +  DV +G+ALV  Y   G +  A 
Sbjct: 192 EPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQ 251

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
           + F+ MP  NV SW S++ GY+  G+  + L ++ +M+ +G   +  TF  V S+C   G
Sbjct: 252 KLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC---G 308

Query: 677 LVDEGFKHFKSMSQV--YGL 694
           L+++    ++ +  +  YG 
Sbjct: 309 LLEDQVLGYQVLGHIIQYGF 328



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 13/282 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K     H  I+  GF  D ++ N+LI +Y + GDL S++ +FD + +++ ++W  +V+  
Sbjct: 618 KHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAAN 677

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
            H G   EA K+F EM   G  L++++    L A         + G Q+H LV+K     
Sbjct: 678 AHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAV--LEEGQQLHGLVIKLGFES 735

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V+N  + MYG C E  D  + + + I  R  +SWN +IS +++ G      + F  M
Sbjct: 736 DLHVTNAAMDMYGKCGEMHDVLKMLPQPI-NRSRLSWNILISAFARHGCFQKARETFHEM 794

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            + G     KP+  TF SL++A     L     L    +M ++ G+   +     ++   
Sbjct: 795 LKLG----PKPDHVTFVSLLSACNHGGLVDEG-LAYYDSMTREFGVFPGIEHCVCIIDLL 849

Query: 242 ARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVHGYL 282
            R G   +A    ++M +  N ++   L+   R    +HG L
Sbjct: 850 GRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACR----IHGNL 887



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 88/171 (51%), Gaps = 3/171 (1%)

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           L   + + +   G  +HA  +   +   +   + L++MYSK G I++A   FD M  RN 
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG-LVDEGFKHFK 686
            SW++M+SGY R G  ++A+ LF QM   G  P+      +++ACS +G + DEGF+   
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 220

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
            + +  G++  +   + +V   G  G +   ++   +MP   N + W +++
Sbjct: 221 FVVKT-GILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLM 269


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 331/970 (34%), Positives = 521/970 (53%), Gaps = 57/970 (5%)

Query: 7    FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
             H QI+  GF +   + + LIN+Y        A  +FD  P+ + + W  ++  YT    
Sbjct: 51   IHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQ 109

Query: 67   SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             NEA +M+  MV  G   ++Y    VL+AC   G    + G+  H  + +     D  + 
Sbjct: 110  YNEALEMYYCMVEKGLEPDKYTFTFVLKACT--GALNLQEGVWFHGEIDRRGLERDVFIG 167

Query: 127  NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
              L+ MY S +     AR +F+++  RD+++WN++I+  SQ  D       F  MQ  G 
Sbjct: 168  AGLVDMY-SKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVG- 225

Query: 187  RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
               ++P+  +  +L        LS   L + I   V +    S   V + L+  +++ G+
Sbjct: 226  ---VEPSSVSLLNLFPGICK--LSNIELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGD 278

Query: 247  FYYARKIFEQMIQKNVVSMNGLMEGR---------------------------------- 272
               AR++F+QM+ ++ VS   +M G                                   
Sbjct: 279  VDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLA 338

Query: 273  -------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    KGKE+HG  ++  +   + V   L+ MYAKCG  + ++ +F  + G+D V+W
Sbjct: 339  AAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAW 398

Query: 326  NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
            + +I+ L Q G  EEA+  F  M+   +  +  +L+S L +CA L  + LG+ IH   +K
Sbjct: 399  SAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVK 458

Query: 386  LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
              +DSD+S   AL+S+YA  G+ +  L  F  M   D V+WNS+I  +A      + A+ 
Sbjct: 459  ADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYN-AID 517

Query: 446  YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
             +  +R +  +P+  T + ++ A +  +    G  +H  ++K    ++  ++NAL+  Y 
Sbjct: 518  MFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYA 577

Query: 506  KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
            KCG +   E +F +    +DEV+WN +I+ Y+ N    +A++    M       +  TF 
Sbjct: 578  KCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFV 637

Query: 566  TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
            +VL A A +A    GM  HAC ++     + ++G++L+DMY+KCG++DY+ + F+ M  +
Sbjct: 638  SVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHK 697

Query: 626  NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
            +  SWN+M+SGYA HGHGD+A+ LFS M+      D V+FV VLSAC HAGLV+EG K F
Sbjct: 698  DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIF 757

Query: 686  KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANC 745
             SMS  Y + P LE ++CMVDLLGRAG  D+   FI  MP+ P++ +W  +LG+ CR + 
Sbjct: 758  HSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGS-CRMH- 815

Query: 746  RKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSW 805
               +LG  A + L ++EP+N  ++V+L+++YA  G+W D  KAR  M +  +KK  GCSW
Sbjct: 816  SNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSW 875

Query: 806  VTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVS 865
            V +K+ VH F  GD+SHP+ + ++     L +KM   GYVP     L ++E E KE  + 
Sbjct: 876  VELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLY 935

Query: 866  YHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFN 924
             HSE++A+ F L        I+I+KNLRVC DCH+  KFISKI  R I++RD+ RFHHF 
Sbjct: 936  SHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFE 995

Query: 925  DGKCSCGDYW 934
            DG CSC DYW
Sbjct: 996  DGICSCNDYW 1005



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 232/460 (50%), Gaps = 10/460 (2%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           ++H  +I SG     ++ + L+N+Y+     D +RSVF        + WN+MI    ++ 
Sbjct: 50  QIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 108

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
            Y EA+  +  M   GL    ++    L +C     +  G   HGE  + GL+ DV +  
Sbjct: 109 QYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
            L+ +Y+  G L R  +VF  MP+ D V+WN++I   + SE    EAV ++  M+  G  
Sbjct: 169 GLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSED-PCEAVDFFRSMQLVGVE 227

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P+ V+ +N+       S  +L   +H  V + + +  + + N L+  Y KCG++D   ++
Sbjct: 228 PSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFS--SAVSNGLIDLYSKCGDVDVARRV 285

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F +M + +D+VSW +M++GY HN    + + L   M     R++  +  +   A A    
Sbjct: 286 FDQMVD-QDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETID 344

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           LE+G E+H C ++  ++ D+++ + L+ MY+KCG  + A + F  +  R++ +W+++I+ 
Sbjct: 345 LEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAA 404

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
             + G+ ++AL+LF +M+     P+ VT + +L AC+   L+  G K     +    +  
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLG-KSIHCFTVKADMDS 463

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMP----ITPNSLI 732
            L   + +V +  + G         N+M     +T NSLI
Sbjct: 464 DLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLI 503



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 211/472 (44%), Gaps = 53/472 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   L+     D+ +   L+ +Y + G+   A +LF  +  R+ V+W+ I++     
Sbjct: 349 KEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQT 408

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   EA  +F+EM       NR  L S+L AC +   S  K G  +HC  +K++   D  
Sbjct: 409 GYPEEALSLFQEMQNQKMKPNRVTLMSILPACADL--SLLKLGKSIHCFTVKADMDSDLS 466

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
               L++MY  C   T  A   F  + +RD+++WNS+I+ Y+Q GD  +   +F +++  
Sbjct: 467 TGTALVSMYAKCGFFT-AALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLS 525

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
               ++ P+  T   ++ A   ++L+       I  ++ K G  SD +V +AL+  +A+ 
Sbjct: 526 ----AINPDAGTMVGVVPAC--ALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKC 579

Query: 245 GNFYYARKI--------------------------------FEQMIQKN----------V 262
           G+   A  +                                F QM  +N          V
Sbjct: 580 GSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSV 639

Query: 263 VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
           +     +   R+G   H  +I+ G      VGN L++MYAKCG +D S  +F  M  KD+
Sbjct: 640 LPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDT 699

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI-HG 381
           VSWN M+SG   +G  + AI  F  M+   +   + S +S LS+C   G +  G++I H 
Sbjct: 700 VSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHS 759

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
              K  +  D+     ++ L   AG     L    +MP E D   W +++G+
Sbjct: 760 MSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGS 811



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 163/357 (45%), Gaps = 29/357 (8%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H   +K     D+     L+++Y + G   +A   F+ M  R+ V+W  +++GY
Sbjct: 447 KLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGY 506

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G    A  MF ++  +    +   +  V+ AC     +    G  +H L++K     
Sbjct: 507 AQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALL--NDLDQGTCIHGLIVKLGFES 564

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIE-TRDLISWNSIISVYSQRGDTISVFKLFSR 180
           D  V N LI MY  C  S   A  +F + + T+D ++WN II+ Y Q G        F +
Sbjct: 565 DCHVKNALIDMYAKC-GSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQ 623

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M+ E F     PN  TF S++ AA  + L+         A + + G LS+  VG++L+  
Sbjct: 624 MRLENFH----PNSVTFVSVLPAA--AYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDM 677

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS-GLFDMVAVGN---- 295
           +A+ G   Y+ K+F +M  K+ VS N ++ G      VHG+  R+  LF ++        
Sbjct: 678 YAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGY----AVHGHGDRAIALFSLMQESQVQID 733

Query: 296 --GLVNMYAKC---GTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEAI 342
               V++ + C   G +++ R +F     ++ I  D   +  M+  L + G ++E +
Sbjct: 734 SVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETL 790



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 129/270 (47%), Gaps = 14/270 (5%)

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           Q+HAQ+I     +  +I + L++ Y    + D    +F   +     + WNSMI  Y  +
Sbjct: 50  QIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDS-TPNPSRILWNSMIRAYTRS 107

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
           +   +A+ + + M+++G   D +TF  VL AC     L+ G+  H    R  LE DV IG
Sbjct: 108 KQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIG 167

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           + LVDMYSK G +  A   FD MP R+V +WN+MI+G ++     +A+  F  M+L G  
Sbjct: 168 AGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVE 227

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC----MVDLLGRAGELD 715
           P  V+ + +               + +    ++G + + +  S     ++DL  + G++D
Sbjct: 228 PSSVSLLNLFPGICK-------LSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVD 280

Query: 716 KIEEFINKMPITPNSLIWRTVLGACCRANC 745
                 ++M +  + + W T++       C
Sbjct: 281 VARRVFDQM-VDQDDVSWGTMMAGYAHNGC 309


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 343/959 (35%), Positives = 523/959 (54%), Gaps = 39/959 (4%)

Query: 2    KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
            K  K  H +I+  G   D +L N LI +Y + G L SA ++FD+  DR+ V+W  I++ Y
Sbjct: 628  KLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAY 687

Query: 62   THKGMSN-----EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGF-KFGMQVHCLVL 115
                 S+     E  ++F  +   GF + R    ++    + C  SGF +    VH   +
Sbjct: 688  AQFADSSYENVLEGFRLFGLLREFGFSITRL---TLAPLLKLCLLSGFVQVSETVHGYAV 744

Query: 116  KSNQTFDGLVSNVLIAMYGSCLES-TDCARRIFEEIETRDLISWNSIISVYSQRGDTISV 174
            K     D  VS  L+ +Y  C       AR +F+++  RD + WN ++  Y +       
Sbjct: 745  KIGFELDLFVSGALVNIY--CKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802

Query: 175  FKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG-SYLLQQILAMVKKAGLL---SD 230
             + FS   R GF     P+      +I    S V +      +Q+ A   K       S+
Sbjct: 803  LRFFSAFHRSGF----XPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSN 858

Query: 231  LYVGSALVSGFARLGNFYYARKIFEQMIQKNV----------VSMNGLMEGRRKGKEVHG 280
            ++  +  ++ F   G    A   F+ +++  +          +S     +    G+++H 
Sbjct: 859  IFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHA 918

Query: 281  YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
             +I+S    +V V N L+NMY+K G +  +   F      D +SWNTMIS   QN    E
Sbjct: 919  LVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEME 978

Query: 341  AIMNFCAMRRDGLMSSNFSLISTLSSCASLG---WIMLGQQIHGEGLKLGLDSDVSVSNA 397
            AI  F  + RDGL    F+L S L +C++     +  LG Q+H   +K G+ +D  VS A
Sbjct: 979  AICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTA 1038

Query: 398  LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
            L+ LY+  G +     +     + D  SWN+++  +  S     +A++++  M   G   
Sbjct: 1039 LIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNK-SRKALEHFSLMHEMGIPI 1097

Query: 458  NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
            + +T    + A+      K G Q+ A  IK    N+  + + +L  Y KCG+M +  ++F
Sbjct: 1098 DEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELF 1157

Query: 518  ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
              +S R DEV+W +MISGYI N     A+++   M   G + D +TFAT++ A + +  L
Sbjct: 1158 GEIS-RPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTAL 1216

Query: 578  ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
            E+G ++HA  V+     D  +G++LVDMY KCG +  A R F  M VR V  WN+M+ G 
Sbjct: 1217 EQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGL 1276

Query: 638  ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
            A+HGH D+AL LF  M+ +G  PD VTF+GVLSACSH+GL  E +K+F +M + YG+ P+
Sbjct: 1277 AQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPE 1336

Query: 698  LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
            +E +SC+VD LGRAG + + E  I  MP   ++ ++R +LGAC        E  ++ A+ 
Sbjct: 1337 IEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKG--DAETAKRVADK 1394

Query: 758  LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
            L  ++P ++  YVLL+N+YA+  +W+DV  AR  MK   VKK+ G SW+ +K+ VH+FV 
Sbjct: 1395 LLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVV 1454

Query: 818  GDESHPEKDLIYEKLKELNQKMRDAG-YVPQTKFALFDLEPESKEDLVSYHSEKIAVAF- 875
             D SHP+  LIYEK+++L +++R+ G YVP T F L D+E E KE  + YHSEK+A+AF 
Sbjct: 1455 DDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFG 1514

Query: 876  VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            +++      IR++KNLRVCGDCHSA K ISK+  REIVLRD+NRFHHF +G CSCGDYW
Sbjct: 1515 LISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 218/462 (47%), Gaps = 44/462 (9%)

Query: 269  MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
            M   + GK  H  ++ SG      + N L+ MY+KCG++  +R VF     +D V+WN++
Sbjct: 624  MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683

Query: 329  ISGLDQ--NGCYE---EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
            ++   Q  +  YE   E    F  +R  G   +  +L   L  C   G++ + + +HG  
Sbjct: 684  LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743

Query: 384  LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
            +K+G + D+ VS AL+++Y   G + +   +F  MPE D V WN ++ A+ ++ +   EA
Sbjct: 744  VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN-SFQDEA 802

Query: 444  VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
            ++++    R+G+ P+      ++   +S                 +V+N        +  
Sbjct: 803  LRFFSAFHRSGFXPDFSNLHCVIGGVNS-----------------DVSNNRKRHAEQVKA 845

Query: 504  YG-KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            Y  K    D    IFA          WN  ++ ++H   +  A++    +++     D  
Sbjct: 846  YAMKMFPFDQGSNIFA----------WNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSV 895

Query: 563  TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
            T   +LSA      L+ G ++HA  +++     V + ++L++MYSK G +  A + F   
Sbjct: 896  TLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955

Query: 623  PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
            P  ++ SWN+MIS YA++    +A+  F  +  DG  PD  T   VL ACS     DEG 
Sbjct: 956  PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEG- 1011

Query: 683  KHFKSMSQVY------GLIPQLEQFSCMVDLLGRAGELDKIE 718
            ++F   SQV+      G+I      + ++DL  + G++D+ E
Sbjct: 1012 EYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAE 1053



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 90/390 (23%), Positives = 162/390 (41%), Gaps = 46/390 (11%)

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           S  ++  + LG++ H   +  G   D  ++N L+++Y+  G L    +VF    + D V+
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVT 679

Query: 426 WNSVIGA---FADSE-ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           WNS++ A   FADS    V E  + +  +R  G+S   +T   +L         ++   V
Sbjct: 680 WNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETV 739

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H   +K     +  +  AL++ Y K G +     +F +M E RD V WN M+  Y+ N  
Sbjct: 740 HGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPE-RDAVLWNVMLKAYVENSF 798

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +A+       + G   D      V+    S  +  R  + HA  V+A           
Sbjct: 799 QDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNR--KRHAEQVKA----------- 845

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
                       YA + F      N+++WN  ++ +   G    A+  F  +       D
Sbjct: 846 ------------YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHD 893

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI------PQLEQFSCMVDLLGRAGELD 715
            VT V +LSA   A  +D G        Q++ L+      P +   + ++++  +AG + 
Sbjct: 894 SVTLVIILSAAVGADDLDLG-------EQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVY 946

Query: 716 KIEE-FINKMPITPNSLIWRTVLGACCRAN 744
             E+ FIN   +  + + W T++ +  + N
Sbjct: 947 AAEKTFINSPEL--DLISWNTMISSYAQNN 974


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 329/950 (34%), Positives = 529/950 (55%), Gaps = 57/950 (6%)

Query: 29  VYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYA 88
           +Y + G +  A  LFD MP RN VSW  ++SG    G+  E  + F++M   G   + + 
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE 148
           + S++ AC   G S F+ G+QVH  V KS    D  VS  ++ +YG       C+R++FE
Sbjct: 61  IASLVTACGRSG-SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYG-VYGLVSCSRKVFE 118

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
           E+  R+++SW S++  YS +G+   V  ++  M+ EG    +  NE +   +I++    +
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEG----VGCNENSMSLVISSC--GL 172

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN-- 266
           L    L +QI+  V K+GL S L V ++L+S    +GN  YA  IF+QM +++ +S N  
Sbjct: 173 LKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSI 232

Query: 267 ---------------------------------------GLMEGRRKGKEVHGYLIRSGL 287
                                                  G ++ ++ G+ +HG +++ G 
Sbjct: 233 AAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF 292

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
             +V V N L+ MYA  G   ++  VF+ M  KD +SWN++++    +G   +A+   C+
Sbjct: 293 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS 352

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M   G   +  +  S L++C +  +   G+ +HG  +  GL  +  + NAL+S+Y   G 
Sbjct: 353 MISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGE 412

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +S   +V   MP  D V+WN++IG +A+ E    +A+  +  MR  G S N +T +++L+
Sbjct: 413 MSESRRVLLQMPRRDVVAWNALIGGYAEDED-PDKALAAFQTMRVEGVSSNYITVVSVLS 471

Query: 468 AAS-SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           A      + + G  +HA ++     ++  ++N+L++ Y KCG++   + +F  + + R+ 
Sbjct: 472 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL-DNRNI 530

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           ++WN+M++   H+    + + LV  M   G  LD F+F+  LSA A +A LE G ++H  
Sbjct: 531 ITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL 590

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            V+   E D  I +A  DMYSKCG I    +       R++ SWN +IS   RHG+ ++ 
Sbjct: 591 AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEV 650

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
              F +M   G  P HVTFV +L+ACSH GLVD+G  ++  +++ +GL P +E   C++D
Sbjct: 651 CATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVID 710

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQN 765
           LLGR+G L + E FI+KMP+ PN L+WR++L +C    N  +   GRKAA  L ++EP++
Sbjct: 711 LLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDR---GRKAAENLSKLEPED 767

Query: 766 AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
              YVL +NM+A+ G+WEDV   RK M    +KK+  CSWV +KD V  F  GD +HP+ 
Sbjct: 768 DSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQT 827

Query: 826 DLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LP 884
             IY KL+++ + ++++GYV  T  AL D + E KE  +  HSE++A+A+ L    +   
Sbjct: 828 MEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGST 887

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +RI KNLR+C DCHS +KF+S+++GR IVLRD  RFHHF  G CSC DYW
Sbjct: 888 VRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937



 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 201/708 (28%), Positives = 339/708 (47%), Gaps = 71/708 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  + K G   DV++   ++++Y   G ++ + K+F+EMPDRN VSW  ++ GY+ KG  
Sbjct: 82  HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEP 141

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            E   ++K M   G   N  ++  V+ +C          G Q+   V+KS       V N
Sbjct: 142 EEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE--SLGRQIIGQVVKSGLESKLAVEN 199

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI+M GS + + D A  IF+++  RD ISWNSI + Y+Q G     F++FS M+    R
Sbjct: 200 SLISMLGS-MGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR----R 254

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQ----ILAMVKKAGLLSDLYVGSALVSGFAR 243
           +  + N  T  +L+     SVL G    Q+    I  +V K G  S + V + L+  +A 
Sbjct: 255 FHDEVNSTTVSTLL-----SVL-GHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAG 308

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLM-----EGR-------------------------- 272
            G    A  +F+QM  K+++S N LM     +GR                          
Sbjct: 309 AGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSA 368

Query: 273 ----------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                      KG+ +HG ++ SGLF    +GN LV+MY K G + +SR V   M  +D 
Sbjct: 369 LAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDV 428

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM-LGQQIHG 381
           V+WN +I G  ++   ++A+  F  MR +G+ S+  +++S LS+C   G ++  G+ +H 
Sbjct: 429 VAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA 488

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             +  G +SD  V N+L+++YA  G LS    +F  +   + ++WN+++ A A       
Sbjct: 489 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH-HGHGE 547

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           E +K    MR  G S +  +F   L+AA+  ++ + G Q+H   +K    +++ I NA  
Sbjct: 548 EVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAA 607

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
             Y KCGE+ +  K+    S  R   SWN +IS    +    +       M++ G +  H
Sbjct: 608 DMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGH 666

Query: 562 FTFATVLSACASVATLERGMEVHAC-----GVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
            TF ++L+AC+    +++G+  +       G+   +E  + +    +D+  + GR+  A 
Sbjct: 667 VTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICV----IDLLGRSGRLAEAE 722

Query: 617 RFFDLMPVR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
            F   MP++ N   W S+++    HG+ D+       +    P  D V
Sbjct: 723 TFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSV 770



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 136/281 (48%), Gaps = 12/281 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  ++ H  ++  G  Y+  + N L+++Y ++G+++ + ++  +MP R+ V+W  ++ GY
Sbjct: 379 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 438

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                 ++A   F+ M   G   N   + SVL AC   G    + G  +H  ++ +    
Sbjct: 439 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL-LERGKPLHAYIVSAGFES 497

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V N LI MY  C + +  ++ +F  ++ R++I+WN++++  +  G    V KL S+M
Sbjct: 498 DEHVKNSLITMYAKCGDLSS-SQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 556

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           +   F  SL    ++ G L  AA  +VL      QQ+  +  K G   D ++ +A    +
Sbjct: 557 R--SFGVSLDQFSFSEG-LSAAAKLAVLEEG---QQLHGLAVKLGFEHDSFIFNAAADMY 610

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYL 282
           ++ G      K+    + +++ S N L+    +    HGY 
Sbjct: 611 SKCGEIGEVVKMLPPSVNRSLPSWNILISALGR----HGYF 647



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 7/200 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  I+  GF  D  + N+LI +Y + GDL+S+  LF+ + +RN ++W  +++   H
Sbjct: 483 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 542

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   E  K+  +M   G  L++++    L A  +      + G Q+H L +K     D 
Sbjct: 543 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV--LEEGQQLHGLAVKLGFEHDS 600

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            + N    MY  C E  +  + +   +  R L SWN +IS   + G    V   F  M  
Sbjct: 601 FIFNAAADMYSKCGEIGEVVKMLPPSV-NRSLPSWNILISALGRHGYFEEVCATFHEMLE 659

Query: 184 EGFRYSLKPNEYTFGSLITA 203
            G    +KP   TF SL+TA
Sbjct: 660 MG----IKPGHVTFVSLLTA 675



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 44/99 (44%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H   +K GF +D F+ N   ++Y + G++    K+     +R+  SW  ++S  
Sbjct: 582 EEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISAL 641

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   E C  F EM+  G         S+L AC   G
Sbjct: 642 GRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGG 680


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  587 bits (1513), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 343/959 (35%), Positives = 523/959 (54%), Gaps = 39/959 (4%)

Query: 2    KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
            K  K  H +I+  G   D +L N LI +Y + G L SA ++FD+  DR+ V+W  I++ Y
Sbjct: 628  KLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAY 687

Query: 62   THKGMSN-----EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGF-KFGMQVHCLVL 115
                 S+     E  ++F  +   GF + R    ++    + C  SGF +    VH   +
Sbjct: 688  AQFADSSYENVLEGFRLFGLLREFGFSITRL---TLAPLLKLCLLSGFVQVSETVHGYAV 744

Query: 116  KSNQTFDGLVSNVLIAMYGSCLES-TDCARRIFEEIETRDLISWNSIISVYSQRGDTISV 174
            K     D  VS  L+ +Y  C       AR +F+++  RD + WN ++  Y +       
Sbjct: 745  KIGFELDLFVSGALVNIY--CKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802

Query: 175  FKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG-SYLLQQILAMVKKAGLL---SD 230
             + FS   R GF     P+      +I    S V +      +Q+ A   K       S+
Sbjct: 803  LRFFSAFHRSGFF----PDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSN 858

Query: 231  LYVGSALVSGFARLGNFYYARKIFEQMIQKNV----------VSMNGLMEGRRKGKEVHG 280
            ++  +  ++ F   G    A   F+ +++  +          +S     +    G+++H 
Sbjct: 859  IFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHA 918

Query: 281  YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
             +I+S    +V V N L+NMY+K G +  +   F      D +SWNTMIS   QN    E
Sbjct: 919  LVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEME 978

Query: 341  AIMNFCAMRRDGLMSSNFSLISTLSSCASLG---WIMLGQQIHGEGLKLGLDSDVSVSNA 397
            AI  F  + RDGL    F+L S L +C++     +  LG Q+H   +K G+ +D  VS A
Sbjct: 979  AICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTA 1038

Query: 398  LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
            L+ LY+  G +     +     + D  SWN+++  +  S     +A++++  M   G   
Sbjct: 1039 LIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNK-SRKALEHFSLMHEMGIPI 1097

Query: 458  NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
            + +T    + A+      K G Q+ A  IK    N+  + + +L  Y KCG+M +  ++F
Sbjct: 1098 DEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELF 1157

Query: 518  ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
              +S R DEV+W +MISGYI N     A+++   M   G + D +TFAT++ A + +  L
Sbjct: 1158 GEIS-RPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTAL 1216

Query: 578  ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
            E+G ++HA  V+     D  +G++LVDMY KCG +  A R F  M VR V  WN+M+ G 
Sbjct: 1217 EQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGL 1276

Query: 638  ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
            A+HGH D+AL LF  M+ +G  PD VTF+GVLSACSH+GL  E +K+F +M + YG+ P+
Sbjct: 1277 AQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPE 1336

Query: 698  LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
            +E +SC+VD LGRAG + + E  I  MP   ++ ++R +LGAC        E  ++ A+ 
Sbjct: 1337 IEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKG--DAETAKRVADK 1394

Query: 758  LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
            L  ++P ++  YVLL+N+YA+  +W+DV  AR  MK   VKK+ G SW+ +K+ VH+FV 
Sbjct: 1395 LLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVV 1454

Query: 818  GDESHPEKDLIYEKLKELNQKMRDAG-YVPQTKFALFDLEPESKEDLVSYHSEKIAVAF- 875
             D SHP+  LIYEK+++L +++R+ G YVP T F L D+E E KE  + YHSEK+A+AF 
Sbjct: 1455 DDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFG 1514

Query: 876  VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            +++      IR++KNLRVCGDCHSA K ISK+  REIVLRD+NRFHHF +G CSCGDYW
Sbjct: 1515 LISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 218/462 (47%), Gaps = 44/462 (9%)

Query: 269  MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
            M   + GK  H  ++ SG      + N L+ MY+KCG++  +R VF     +D V+WN++
Sbjct: 624  MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683

Query: 329  ISGLDQ--NGCYE---EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
            ++   Q  +  YE   E    F  +R  G   +  +L   L  C   G++ + + +HG  
Sbjct: 684  LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743

Query: 384  LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
            +K+G + D+ VS AL+++Y   G + +   +F  MPE D V WN ++ A+ ++ +   EA
Sbjct: 744  VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN-SFQDEA 802

Query: 444  VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
            ++++    R+G+ P+      ++   +S                 +V+N        +  
Sbjct: 803  LRFFSAFHRSGFFPDFSNLHCVIGGVNS-----------------DVSNNRKRHAEQVKA 845

Query: 504  YG-KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            Y  K    D    IFA          WN  ++ ++H   +  A++    +++     D  
Sbjct: 846  YAMKMFPFDQGSNIFA----------WNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSV 895

Query: 563  TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
            T   +LSA      L+ G ++HA  +++     V + ++L++MYSK G +  A + F   
Sbjct: 896  TLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955

Query: 623  PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
            P  ++ SWN+MIS YA++    +A+  F  +  DG  PD  T   VL ACS     DEG 
Sbjct: 956  PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEG- 1011

Query: 683  KHFKSMSQVY------GLIPQLEQFSCMVDLLGRAGELDKIE 718
            ++F   SQV+      G+I      + ++DL  + G++D+ E
Sbjct: 1012 EYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAE 1053



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 90/390 (23%), Positives = 162/390 (41%), Gaps = 46/390 (11%)

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           S  ++  + LG++ H   +  G   D  ++N L+++Y+  G L    +VF    + D V+
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVT 679

Query: 426 WNSVIGA---FADSE-ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           WNS++ A   FADS    V E  + +  +R  G+S   +T   +L         ++   V
Sbjct: 680 WNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETV 739

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H   +K     +  +  AL++ Y K G +     +F +M E RD V WN M+  Y+ N  
Sbjct: 740 HGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPE-RDAVLWNVMLKAYVENSF 798

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +A+       + G   D      V+    S  +  R  + HA  V+A           
Sbjct: 799 QDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNR--KRHAEQVKA----------- 845

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
                       YA + F      N+++WN  ++ +   G    A+  F  +       D
Sbjct: 846 ------------YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHD 893

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI------PQLEQFSCMVDLLGRAGELD 715
            VT V +LSA   A  +D G        Q++ L+      P +   + ++++  +AG + 
Sbjct: 894 SVTLVIILSAAVGADDLDLG-------EQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVY 946

Query: 716 KIEE-FINKMPITPNSLIWRTVLGACCRAN 744
             E+ FIN   +  + + W T++ +  + N
Sbjct: 947 AAEKTFINSPEL--DLISWNTMISSYAQNN 974


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 328/970 (33%), Positives = 518/970 (53%), Gaps = 57/970 (5%)

Query: 7    FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
             H QI+  GF +   + + LIN+Y        A  +FD  P+ + + W  ++  YT    
Sbjct: 51   IHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQ 109

Query: 67   SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             NEA +M+  MV  G   ++Y    VL+AC   G    + G+  H  + +     D  + 
Sbjct: 110  YNEALEMYYCMVEKGLEPDKYTFTFVLKACT--GALNLQEGVWFHGEIDRRGLERDVFIG 167

Query: 127  NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
              L+ MY S +     AR +F+++  RD+++WN++I+  SQ  D       F  MQ  G 
Sbjct: 168  AGLVDMY-SKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVG- 225

Query: 187  RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
               ++P+  +  +L        LS   L + I   V +    S   V + L+  +++ G+
Sbjct: 226  ---VEPSSVSLLNLFPGICK--LSNIELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGD 278

Query: 247  FYYARKIFEQMIQKNVVSMNGLMEGR---------------------------------- 272
               AR++F+QM+ ++ VS   +M G                                   
Sbjct: 279  VDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLA 338

Query: 273  -------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    KGKE+HG  ++  +   + V   L+ MYAKCG  + ++ +F  + G+D V+W
Sbjct: 339  AAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAW 398

Query: 326  NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
            + +I+ L Q G  EEA+  F  M+   +  +  +L+S L +CA L  + LG+ IH   +K
Sbjct: 399  SAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVK 458

Query: 386  LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
              +DSD+S   AL+S+YA  G+ +  L  F  M   D V+WNS+I  +A      + A+ 
Sbjct: 459  ADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYN-AID 517

Query: 446  YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
             +  +R +  +P+  T + ++ A +  +    G  +H  ++K    ++  ++NAL+  Y 
Sbjct: 518  MFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYA 577

Query: 506  KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
            KCG +   E +F +    +DEV+WN +I+ Y+ N    +A++    M       +  TF 
Sbjct: 578  KCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFV 637

Query: 566  TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
            +VL A A +A    GM  HAC ++     + ++G++L+DMY+KCG++ Y+ + F+ M  +
Sbjct: 638  SVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHK 697

Query: 626  NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
            +  SWN+M+SGYA HGHGD+A+ LFS M+      D V+FV VLSAC H GLV+EG K F
Sbjct: 698  DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIF 757

Query: 686  KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANC 745
             SMS  Y + P LE ++CMVDLLGRAG  D+   FI  MP+ P++ +W  +LG+C   + 
Sbjct: 758  HSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHS- 816

Query: 746  RKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSW 805
               +LG  A + L ++EP+N  ++V+L+++YA  G+W D  KAR  M +  +KK  GCSW
Sbjct: 817  -NVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSW 875

Query: 806  VTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVS 865
            V +K+ VH F  GD+SHP+ + ++     L +KM   GYVP     L ++E E KE  + 
Sbjct: 876  VELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLY 935

Query: 866  YHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFN 924
             HSE++A+ F L        I+I+KNLRVC DCH+  KFISKI  R I++RD+ RFHHF 
Sbjct: 936  SHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFE 995

Query: 925  DGKCSCGDYW 934
            DG CSC DYW
Sbjct: 996  DGICSCNDYW 1005



 Score =  210 bits (534), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 232/460 (50%), Gaps = 10/460 (2%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           ++H  +I SG     ++ + L+N+Y+     D +RSVF        + WN+MI    ++ 
Sbjct: 50  QIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 108

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
            Y EA+  +  M   GL    ++    L +C     +  G   HGE  + GL+ DV +  
Sbjct: 109 QYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
            L+ +Y+  G L R  +VF  MP+ D V+WN++I   + SE    EAV ++  M+  G  
Sbjct: 169 GLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSED-PCEAVDFFRSMQLVGVE 227

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P+ V+ +N+       S  +L   +H  V + + +  + + N L+  Y KCG++D   ++
Sbjct: 228 PSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFS--SAVSNGLIDLYSKCGDVDVARRV 285

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F +M + +D+VSW +M++GY HN    + + L   M     R++  +  +   A A    
Sbjct: 286 FDQMVD-QDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETID 344

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           LE+G E+H C ++  ++ D+++ + L+ MY+KCG  + A + F  +  R++ +W+++I+ 
Sbjct: 345 LEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAA 404

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
             + G+ ++AL+LF +M+     P+ VT + +L AC+   L+  G K     +    +  
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLG-KSIHCFTVKADMDS 463

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMP----ITPNSLI 732
            L   + +V +  + G         N+M     +T NSLI
Sbjct: 464 DLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLI 503



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 211/475 (44%), Gaps = 53/475 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H   L+     D+ +   L+ +Y + G+   A +LF  +  R+ V+W+ I++  
Sbjct: 346 EKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAAL 405

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   EA  +F+EM       NR  L S+L AC +   S  K G  +HC  +K++   
Sbjct: 406 VQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADL--SLLKLGKSIHCFTVKADMDS 463

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D      L++MY  C   T  A   F  + +RD+++WNS+I+ Y+Q GD  +   +F ++
Sbjct: 464 DLSTGTALVSMYAKCGFFT-AALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKL 522

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           +      ++ P+  T   ++ A   ++L+       I  ++ K G  SD +V +AL+  +
Sbjct: 523 RLS----AINPDAGTMVGVVPAC--ALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMY 576

Query: 242 ARLGNFYYARKI--------------------------------FEQMIQKN-------- 261
           A+ G+   A  +                                F QM  +N        
Sbjct: 577 AKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTF 636

Query: 262 --VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
             V+     +   R+G   H  +I+ G      VGN L++MYAKCG +  S  +F  M  
Sbjct: 637 VSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDH 696

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           KD+VSWN M+SG   +G  + AI  F  M+   +   + S +S LS+C   G +  G++I
Sbjct: 697 KDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKI 756

Query: 380 -HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            H    K  +  D+     ++ L   AG     L    +MP E D   W +++G+
Sbjct: 757 FHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGS 811



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 129/270 (47%), Gaps = 14/270 (5%)

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           Q+HAQ+I     +  +I + L++ Y    + D    +F   +     + WNSMI  Y  +
Sbjct: 50  QIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDS-TPNPSRILWNSMIRAYTRS 107

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
           +   +A+ + + M+++G   D +TF  VL AC     L+ G+  H    R  LE DV IG
Sbjct: 108 KQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIG 167

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           + LVDMYSK G +  A   FD MP R+V +WN+MI+G ++     +A+  F  M+L G  
Sbjct: 168 AGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVE 227

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC----MVDLLGRAGELD 715
           P  V+ + +               + +    ++G + + +  S     ++DL  + G++D
Sbjct: 228 PSSVSLLNLFPGICK-------LSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVD 280

Query: 716 KIEEFINKMPITPNSLIWRTVLGACCRANC 745
                 ++M +  + + W T++       C
Sbjct: 281 VARRVFDQM-VDQDDVSWGTMMAGYAHNGC 309


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  583 bits (1502), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 328/959 (34%), Positives = 521/959 (54%), Gaps = 82/959 (8%)

Query: 20   VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
            V   NTLIN+Y + G +  A  LFD MP RN VSW  ++SG    G+  E  + F++M  
Sbjct: 107  VLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCD 166

Query: 80   AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
             G   + + + S++ AC   G S F+ G+QVH  V KS    D  VS  ++ +YG     
Sbjct: 167  LGIKPSSFVIASLVTACGRSG-SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYG-VYGL 224

Query: 140  TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
              C+R++FEE+  R+++SW S++  YS +G+   V  ++                     
Sbjct: 225  VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK-------------------- 264

Query: 200  LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
                          L +QI+  V K+GL S L V ++L+S    +GN  YA  IF+QM +
Sbjct: 265  -----------DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE 313

Query: 260  KNVVSMN-----------------------------------------GLMEGRRKGKEV 278
            ++ +S N                                         G ++ ++ G+ +
Sbjct: 314  RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGI 373

Query: 279  HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
            HG +++ G   +V V N L+ MYA  G   ++  VF+ M  KD +SWN++++    +G  
Sbjct: 374  HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRS 433

Query: 339  EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
             +A+   C+M   G   +  +  S L++C +  +   G+ +HG  +  GL  +  + NAL
Sbjct: 434  LDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNAL 493

Query: 399  LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
            +S+Y   G +S   +V   MP  D V+WN++IG +A+ E    +A+  +  MR  G S N
Sbjct: 494  VSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED-PDKALAAFQTMRVEGVSSN 552

Query: 459  GVTFINILAAAS-SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
             +T +++L+A      + + G  +HA ++     ++  ++N+L++ Y KCG++   + +F
Sbjct: 553  YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 612

Query: 518  ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
              + + R+ ++WN+M++   H+    + + LV  M   G  LD F+F+  LSA A +A L
Sbjct: 613  NGL-DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVL 671

Query: 578  ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
            E G ++H   V+   E D  I +A  DMYSKCG I    +       R++ SWN +IS  
Sbjct: 672  EEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISAL 731

Query: 638  ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
             RHG+ ++    F +M   G  P HVTFV +L+ACSH GLVD+G  ++  +++ +GL P 
Sbjct: 732  GRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPA 791

Query: 698  LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAAN 756
            +E   C++DLLGR+G L + E FI+KMP+ PN L+WR++L +C    N  +   GRKAA 
Sbjct: 792  IEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDR---GRKAAE 848

Query: 757  MLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV 816
             L ++EP++   YVL +NM+A+ G+WEDV   RK M    +KK+  CSWV +KD V  F 
Sbjct: 849  NLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFG 908

Query: 817  AGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFV 876
             GD +HP+   IY KL+++ + ++++GYV  T  AL D + E KE  +  HSE++A+A+ 
Sbjct: 909  IGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYA 968

Query: 877  LTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            L    +   +RI KNLR+C DCHS +KF+S+++GR IVLRD  RFHHF  G CSC DYW
Sbjct: 969  LMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 226/466 (48%), Gaps = 30/466 (6%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+ VH   ++  +   V   N L+NMY K G +  +R +F  M  ++ VSWNTM+SG+ +
Sbjct: 91  GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML-GQQIHGEGLKLGLDSDVS 393
            G Y E +  F  M   G+  S+F + S +++C   G +   G Q+HG   K GL SDV 
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 210

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           VS A+L LY   G +S   KVF  MP+ + VSW S++  ++D +    E +  Y D    
Sbjct: 211 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD-KGEPEEVIDIYKDE--- 266

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
                                  LG Q+  QV+K  + ++  +EN+L+S  G  G +D  
Sbjct: 267 ----------------------SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA 304

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
             IF +MSE RD +SWNS+ + Y  N  + ++  +   M +    ++  T +T+LS    
Sbjct: 305 NYIFDQMSE-RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 363

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           V   + G  +H   V+   +  V + + L+ MY+  GR   A+  F  MP +++ SWNS+
Sbjct: 364 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 423

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           ++ +   G    AL L   M   G   ++VTF   L+AC      ++G +    +  V G
Sbjct: 424 MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSG 482

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           L       + +V + G+ GE+ +    + +MP   + + W  ++G 
Sbjct: 483 LFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGG 527



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 136/281 (48%), Gaps = 12/281 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  ++ H  ++  G  Y+  + N L+++Y ++G+++ + ++  +MP R+ V+W  ++ GY
Sbjct: 469 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 528

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                 ++A   F+ M   G   N   + SVL AC   G    + G  +H  ++ +    
Sbjct: 529 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL-LERGKPLHAYIVSAGFES 587

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V N LI MY  C + +  ++ +F  ++ R++I+WN++++  +  G    V KL S+M
Sbjct: 588 DEHVKNSLITMYAKCGDLSS-SQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 646

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           +   F  SL    ++ G L  AA  +VL      QQ+  +  K G   D ++ +A    +
Sbjct: 647 R--SFGVSLDQFSFSEG-LSAAAKLAVLEEG---QQLHGLAVKLGFEHDSFIFNAAADMY 700

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYL 282
           ++ G      K+    + +++ S N L+    +    HGY 
Sbjct: 701 SKCGEIGEVVKMLPPSVNRSLPSWNILISALGR----HGYF 737



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 7/200 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  I+  GF  D  + N+LI +Y + GDL+S+  LF+ + +RN ++W  +++   H
Sbjct: 573 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 632

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   E  K+  +M   G  L++++    L A  +      + G Q+H L +K     D 
Sbjct: 633 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV--LEEGQQLHGLAVKLGFEHDS 690

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            + N    MY  C E  +  + +   +  R L SWN +IS   + G    V   F  M  
Sbjct: 691 FIFNAAADMYSKCGEIGEVVKMLPPSV-NRSLPSWNILISALGRHGYFEEVCATFHEMLE 749

Query: 184 EGFRYSLKPNEYTFGSLITA 203
            G    +KP   TF SL+TA
Sbjct: 750 MG----IKPGHVTFVSLLTA 765



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 44/99 (44%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H   +K GF +D F+ N   ++Y + G++    K+     +R+  SW  ++S  
Sbjct: 672 EEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISAL 731

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   E C  F EM+  G         S+L AC   G
Sbjct: 732 GRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGG 770


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 327/971 (33%), Positives = 549/971 (56%), Gaps = 56/971 (5%)

Query: 7    FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
             H +I K GF  +  L ++L++ Y R GD   A K+FDE  +R+  SW  ++  +  +  
Sbjct: 80   LHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKS 139

Query: 67   SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            + +   +F+ M+  G   N Y    VL+AC   G   F +  QVH            LV+
Sbjct: 140  NFQVFCLFRRMLAEGITPNGYTFAGVLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVA 198

Query: 127  NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
            N+LI +Y S     + A+++F  I  +D+++W ++IS  SQ G       LF  M     
Sbjct: 199  NLLIDLY-SKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHAS-- 255

Query: 187  RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
               + P  Y   S+++A  S+ +    L +Q+  +V K G  S+ YV + LV+ ++R   
Sbjct: 256  --EIFPTPYVLSSVLSA--STKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRK 311

Query: 247  FYYARKIFEQMIQKNVVSMNGLMEGR---------------------------------- 272
               A +IF  M  ++ VS N L+ G                                   
Sbjct: 312  LISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSA 371

Query: 273  -------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    KG ++H + I++G+   + +   L+++Y+KC  ++ +   F     ++ V W
Sbjct: 372  CASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLW 431

Query: 326  NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
            N M+    Q     ++   F  M+ +G++ + F+  S L +C SLG + LG+QIH   +K
Sbjct: 432  NVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIK 491

Query: 386  LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
             G   +V V + L+ +YA  G L+  L++   +PE D VSW ++I  +   + + SEA++
Sbjct: 492  TGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHD-MFSEALQ 550

Query: 446  YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
             + +M   G   + + F + ++A +     + G Q+HAQ        + +I NAL+S Y 
Sbjct: 551  LFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYA 610

Query: 506  KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
            +CG + +    F ++ ++ + +SWNS++SG   +    +A+ +   M++    ++ FT+ 
Sbjct: 611  RCGRIQEAYLAFEKIGDK-NNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYG 669

Query: 566  TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
            + +SA AS+A +++G ++H+  ++   + +  + ++L+ +Y+K G I  A R F+ M  R
Sbjct: 670  SAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSER 729

Query: 626  NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
            NV SWN+MI+GY++HG G +AL LF +MK+ G +P+HVTFVGVLSACSH GLV EG  +F
Sbjct: 730  NVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYF 789

Query: 686  KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANC 745
            +SM +++ L+P+ E + C+VDLLGRAG+LD+  E+I +MPI  +++IWRT+L AC     
Sbjct: 790  ESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIH-- 847

Query: 746  RKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSW 805
            +  E+G +AA+ L E+EP+++  YVL++N+YA   +W     +RK MK+  VKKE G SW
Sbjct: 848  KNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSW 907

Query: 806  VTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVS 865
            + +K+ VH F AGD+ HP  + IYE +  LN++  + GYV Q  F+L +   + ++D ++
Sbjct: 908  IEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYV-QDSFSLLNESEQGQKDPIT 966

Query: 866  Y-HSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
            + HSEK+A+AF +L+  + +PIR+MKNLRVC DCH+  K++SKI  R I++RD++RFHHF
Sbjct: 967  HVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHF 1026

Query: 924  NDGKCSCGDYW 934
            + G CSC D+W
Sbjct: 1027 DGGVCSCKDFW 1037



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 200/436 (45%), Gaps = 9/436 (2%)

Query: 307 IDDSRSVFRF--MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           ID + +V R   +   +S S++     ++Q       +MNF  M   G+ S+  + +  L
Sbjct: 8   IDKTNNVVRVSGVGATNSHSFDQTTLHMEQGKSKRIQLMNF--MEERGVRSNYQNYLWLL 65

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
             C + G +    ++H    K G D +  + ++L+  Y   G     +KVF         
Sbjct: 66  EGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVF 125

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG-KLGHQVHA 483
           SWN +I  F   ++   +    +  M   G +PNG TF  +L A     +      QVH+
Sbjct: 126 SWNKMIHVFVAQKSNF-QVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHS 184

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
           +   Y   +   + N L+  Y K G ++  +K+F  +   +D V+W +MISG   N L  
Sbjct: 185 RTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC-MKDIVTWVAMISGLSQNGLEE 243

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +A+ L   M         +  ++VLSA   +   E G ++H   ++     +  + + LV
Sbjct: 244 EAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLV 303

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
            +YS+  ++  A R F  M  R+  S+NS+ISG  + G  D+AL LF++M+ D   PD +
Sbjct: 304 ALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCI 363

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           T   +LSAC+  G + +G +   S +   G+   +     ++DL  +  +++   +F   
Sbjct: 364 TVASLLSACASVGALHKGMQ-LHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLX 422

Query: 724 MPITPNSLIWRTVLGA 739
              T N ++W  +L A
Sbjct: 423 TE-TENIVLWNVMLVA 437



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 108/202 (53%), Gaps = 7/202 (3%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H Q    GF  D+ + N LI++Y R G +  A   F+++ D+N++SW  +VSG 
Sbjct: 581 RQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGL 640

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   EA ++F  M+R    +N +  GS + A      +  K G Q+H +VLK+    
Sbjct: 641 AQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAAS--LANIKQGQQIHSMVLKTGYDS 698

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  VSN LI++Y      +D A R F ++  R++ISWN++I+ YSQ G  +   +LF  M
Sbjct: 699 EREVSNSLISLYAKSGSISD-AWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEM 757

Query: 182 QREGFRYSLKPNEYTFGSLITA 203
           +  G    + PN  TF  +++A
Sbjct: 758 KVCG----IMPNHVTFVGVLSA 775



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 5/123 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H  +LK G+  +  + N+LI++Y + G ++ A + F++M +RN +SW  +++GY
Sbjct: 682 KQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGY 741

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSG-----FKFGMQVHCLVLK 116
           +  G   EA ++F+EM   G + N      VL AC   G        F+   ++H LV K
Sbjct: 742 SQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPK 801

Query: 117 SNQ 119
           S  
Sbjct: 802 SEH 804


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 327/971 (33%), Positives = 549/971 (56%), Gaps = 56/971 (5%)

Query: 7    FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
             H +I K GF  +  L ++L++ Y R GD   A K+FDE  +R+  SW  ++  +  +  
Sbjct: 80   LHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKS 139

Query: 67   SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            + +   +F+ M+  G   N Y    VL+AC   G   F +  QVH            LV+
Sbjct: 140  NFQVFCLFRRMLAEGITPNGYTFAGVLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVA 198

Query: 127  NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
            N+LI +Y S     + A+++F  I  +D+++W ++IS  SQ G       LF  M     
Sbjct: 199  NLLIDLY-SKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHAS-- 255

Query: 187  RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
               + P  Y   S+++A  S+ +    L +Q+  +V K G  S+ YV + LV+ ++R   
Sbjct: 256  --EIFPTPYVLSSVLSA--STKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRK 311

Query: 247  FYYARKIFEQMIQKNVVSMNGLMEGR---------------------------------- 272
               A +IF  M  ++ VS N L+ G                                   
Sbjct: 312  LISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSA 371

Query: 273  -------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    KG ++H + I++G+   + +   L+++Y+KC  ++ +   F     ++ V W
Sbjct: 372  CASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLW 431

Query: 326  NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
            N M+    Q     ++   F  M+ +G++ + F+  S L +C SLG + LG+QIH   +K
Sbjct: 432  NVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIK 491

Query: 386  LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
             G   +V V + L+ +YA  G L+  L++   +PE D VSW ++I  +   + + SEA++
Sbjct: 492  TGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHD-MFSEALQ 550

Query: 446  YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
             + +M   G   + + F + ++A +     + G Q+HAQ        + +I NAL+S Y 
Sbjct: 551  LFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYA 610

Query: 506  KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
            +CG + +    F ++ ++ + +SWNS++SG   +    +A+ +   M++    ++ FT+ 
Sbjct: 611  RCGRIQEAYLAFEKIGDK-NNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYG 669

Query: 566  TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
            + +SA AS+A +++G ++H+  ++   + +  + ++L+ +Y+K G I  A R F+ M  R
Sbjct: 670  SAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSER 729

Query: 626  NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
            NV SWN+MI+GY++HG G +AL LF +MK+ G +P+HVTFVGVLSACSH GLV EG  +F
Sbjct: 730  NVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYF 789

Query: 686  KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANC 745
            +SM +++ L+P+ E + C+VDLLGRAG+LD+  E+I +MPI  +++IWRT+L AC     
Sbjct: 790  ESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIH-- 847

Query: 746  RKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSW 805
            +  E+G +AA+ L E+EP+++  YVL++N+YA   +W     +RK MK+  VKKE G SW
Sbjct: 848  KNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSW 907

Query: 806  VTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVS 865
            + +K+ VH F AGD+ HP  + IYE +  LN++  + GYV Q  F+L +   + ++D ++
Sbjct: 908  IEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYV-QDSFSLLNESEQGQKDPIT 966

Query: 866  Y-HSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
            + HSEK+A+AF +L+  + +PIR+MKNLRVC DCH+  K++SKI  R I++RD++RFHHF
Sbjct: 967  HVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHF 1026

Query: 924  NDGKCSCGDYW 934
            + G CSC D+W
Sbjct: 1027 DGGVCSCKDFW 1037



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 200/436 (45%), Gaps = 9/436 (2%)

Query: 307 IDDSRSVFRF--MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           ID + +V R   +   +S S++     ++Q       +MNF  M   G+ S+  + +  L
Sbjct: 8   IDKTNNVVRVSGVGATNSHSFDQTTLHMEQGKSKRIQLMNF--MEERGVRSNYQNYLWLL 65

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
             C + G +    ++H    K G D +  + ++L+  Y   G     +KVF         
Sbjct: 66  EGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVF 125

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG-KLGHQVHA 483
           SWN +I  F   ++   +    +  M   G +PNG TF  +L A     +      QVH+
Sbjct: 126 SWNKMIHVFVAQKSNF-QVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHS 184

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
           +   Y   +   + N L+  Y K G ++  +K+F  +   +D V+W +MISG   N L  
Sbjct: 185 RTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC-MKDIVTWVAMISGLSQNGLEE 243

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +A+ L   M         +  ++VLSA   +   E G ++H   ++     +  + + LV
Sbjct: 244 EAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLV 303

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
            +YS+  ++  A R F  M  R+  S+NS+ISG  + G  D+AL LF++M+ D   PD +
Sbjct: 304 ALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCI 363

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           T   +LSAC+  G + +G +   S +   G+   +     ++DL  +  +++   +F   
Sbjct: 364 TVASLLSACASVGALHKGMQ-LHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLT 422

Query: 724 MPITPNSLIWRTVLGA 739
              T N ++W  +L A
Sbjct: 423 TE-TENIVLWNVMLVA 437



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 108/202 (53%), Gaps = 7/202 (3%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H Q    GF  D+ + N LI++Y R G +  A   F+++ D+N++SW  +VSG 
Sbjct: 581 RQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGL 640

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   EA ++F  M+R    +N +  GS + A      +  K G Q+H +VLK+    
Sbjct: 641 AQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAAS--LANIKQGQQIHSMVLKTGYDS 698

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  VSN LI++Y      +D A R F ++  R++ISWN++I+ YSQ G  +   +LF  M
Sbjct: 699 EREVSNSLISLYAKSGSISD-AWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEM 757

Query: 182 QREGFRYSLKPNEYTFGSLITA 203
           +  G    + PN  TF  +++A
Sbjct: 758 KVCG----IMPNHVTFVGVLSA 775



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 5/123 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H  +LK G+  +  + N+LI++Y + G ++ A + F++M +RN +SW  +++GY
Sbjct: 682 KQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGY 741

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSG-----FKFGMQVHCLVLK 116
           +  G   EA ++F+EM   G + N      VL AC   G        F+   ++H LV K
Sbjct: 742 SQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPK 801

Query: 117 SNQ 119
           S  
Sbjct: 802 SEH 804


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  579 bits (1493), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 331/887 (37%), Positives = 495/887 (55%), Gaps = 57/887 (6%)

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           S+LR C             +H L++K     D  +   L+ +Y  C  S   AR +  ++
Sbjct: 117 SMLREC--ASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSA-YARLVLAKM 173

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLS 210
             RD++SW ++I      G       LF  MQ EG    + PNE+T  + + A   S+  
Sbjct: 174 PDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEG----IMPNEFTLATGLKAC--SLCM 227

Query: 211 GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
              L +Q+ A   K GLL DL+VGSALV  +A+ G    A K+F  M ++N V+ N L+ 
Sbjct: 228 ALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLN 287

Query: 271 GR-----------------------------------------RKGKEVHGYLIRSGLFD 289
           G                                          ++G+ +H  +I+ G   
Sbjct: 288 GYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEG 347

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
              +G GLV+MY+KCG   D+  VF+ +   D V W+ +I+ LDQ G  EE+I  F  MR
Sbjct: 348 NEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMR 407

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
               + + +++ S LS+  + G +  GQ IH    K G ++DV+VSNAL+++Y   G + 
Sbjct: 408 LGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVH 467

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
              K++  M + D +SWN+ +    D   +    +  +  M   G+ PN  TFI+IL + 
Sbjct: 468 DGTKLYESMVDRDLISWNAYLSGLHDC-GMYDRPLTIFYHMLEEGFIPNMYTFISILGSC 526

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
           S       G QVHA +IK  + +   +  AL+  Y KC  ++D +  F R+S  RD  +W
Sbjct: 527 SCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLS-VRDLFTW 585

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
             +I+ Y       KA+N    M Q G + + FT A  LS C+S+A+LE G ++H+   +
Sbjct: 586 TVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFK 645

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
           +    D+ +GSALVDMY+KCG ++ A   F+ +  R+  +WN++I GYA++G G+KALT 
Sbjct: 646 SGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTA 705

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           F  M  +G  PD VTF G+LSACSH GLV+EG +HF SM + +G+ P ++  +CMVD+LG
Sbjct: 706 FRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILG 765

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
           R G+ D++E+FI KM ++ N+LIW TVLGA    N     LG KAAN LFE++P+   +Y
Sbjct: 766 RVGKFDELEDFIQKMQLSQNALIWETVLGASKMHN--NLVLGEKAANKLFELQPEEESSY 823

Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIY 829
           +LL+N++A+ G+W+DV + R  M    VKKE GCSWV     VH FV+ D SHP+   I+
Sbjct: 824 ILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIH 883

Query: 830 EKLKELNQKMRDAGYVPQTKFALFDL-EPESKEDLVSYHSEKIAVAFVL-TRNSKLPIRI 887
            KL EL++++    YVP+T++ L ++ E E KE+L  +HSE++A+ F L + +S+  IRI
Sbjct: 884 LKLDELDRELASIQYVPKTEYVLHNVGETEKKENL-RFHSERLALGFALISTSSEKKIRI 942

Query: 888 MKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            KNLR+C DCH   K IS I  +EIV+RD  RFHHF +G CSC D+W
Sbjct: 943 FKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989



 Score =  270 bits (689), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 189/690 (27%), Positives = 321/690 (46%), Gaps = 59/690 (8%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  I+K     D  L  +L+NVY +    A A  +  +MPDR+ VSW  ++ G   
Sbjct: 131 AKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVA 190

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           +G +N++  +F+EM   G + N + L + L+AC  C       G Q+H    K     D 
Sbjct: 191 EGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLC--MALDLGKQMHAQAFKLGLLLDL 248

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V + L+ +Y  C E  + A ++F  +  ++ ++WN +++ Y+QRGD   V KLF  M  
Sbjct: 249 FVGSALVDLYAKCGE-IELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSM-- 305

Query: 184 EGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
                 +K NE+T  +++   A S  L      Q I +++ K G   + ++G  LV  ++
Sbjct: 306 --MELDVKCNEFTLTTVLKGCANSKNLKQG---QVIHSLIIKCGYEGNEFIGCGLVDMYS 360

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLM-----EGRRK----------------------- 274
           + G    A  +F+ + + ++V  + L+     +G+ +                       
Sbjct: 361 KCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICS 420

Query: 275 -------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                        G+ +H  + + G    VAV N LV MY K G + D   ++  M+ +D
Sbjct: 421 LLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRD 480

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            +SWN  +SGL   G Y+  +  F  M  +G + + ++ IS L SC+ L  +  G+Q+H 
Sbjct: 481 LISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHA 540

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             +K  LD +  V  AL+ +YA   YL      F  +   D  +W  +I  +A +     
Sbjct: 541 HIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQ-GE 599

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           +A+ Y+  M++ G  PN  T    L+  SS +  + G Q+H+ V K    ++  + +AL+
Sbjct: 600 KALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALV 659

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
             Y KCG M++ E +F  +  RRD ++WN++I GY  N    KA+     M+  G   D 
Sbjct: 660 DMYAKCGCMEEAEALFEALI-RRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDG 718

Query: 562 FTFATVLSACASVATLERGMEVHACGVRAC-LEFDVVIGSALVDMYSKCGRIDYASRFFD 620
            TF  +LSAC+    +E G E      R   +   V   + +VD+  + G+ D    F  
Sbjct: 719 VTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQ 778

Query: 621 LMPV-RNVYSWNSMISGYARHGH---GDKA 646
            M + +N   W +++     H +   G+KA
Sbjct: 779 KMQLSQNALIWETVLGASKMHNNLVLGEKA 808



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 161/613 (26%), Positives = 297/613 (48%), Gaps = 58/613 (9%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H Q  K G   D+F+ + L+++Y + G++  ASK+F  MP++N V+W  +++GY  
Sbjct: 232 GKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQ 291

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           +G      K+F  M+      N + L +VL+ C        K G  +H L++K     + 
Sbjct: 292 RGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGC--ANSKNLKQGQVIHSLIIKCGYEGNE 349

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            +   L+ MY  C  + D A  +F+ I+  D++ W+++I+   Q+G +    KLF  M R
Sbjct: 350 FIGCGLVDMYSKCGLAID-AIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLM-R 407

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G      PN+YT  SL++AA ++        Q I A V K G  +D+ V +ALV+ + +
Sbjct: 408 LG---DTLPNQYTICSLLSAATNT--GNLQYGQSIHACVWKYGFETDVAVSNALVTMYMK 462

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------------------------- 274
            G  +   K++E M+ ++++S N  + G                                
Sbjct: 463 NGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISI 522

Query: 275 ------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                       G++VH ++I++ L D   V   L++MYAKC  ++D+   F  +  +D 
Sbjct: 523 LGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDL 582

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
            +W  +I+   Q    E+A+  F  M+++G+  + F+L   LS C+SL  +  GQQ+H  
Sbjct: 583 FTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSM 642

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
             K G  SD+ V +AL+ +YA  G +     +F  +   D ++WN++I  +A +    ++
Sbjct: 643 VFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQN-GQGNK 701

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--AL 500
           A+  +  M   G SP+GVTF  IL+A S   + + G + H   +  +     T+++   +
Sbjct: 702 ALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKE-HFNSMYRDFGISPTVDHCACM 760

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI-SGYIHNELL--PKAMNLVWFMMQRGQ 557
           +   G+ G+ D+ E    +M   ++ + W +++ +  +HN L+   KA N + F +Q  +
Sbjct: 761 VDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKL-FELQPEE 819

Query: 558 RLDHFTFATVLSA 570
              +   + + + 
Sbjct: 820 ESSYILLSNIFAT 832



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 214/477 (44%), Gaps = 58/477 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  ++ H  I+K G+  + F+   L+++Y + G    A  +F  +   + V W+ +++  
Sbjct: 331 KQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCL 390

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
             +G S E+ K+F  M     L N+Y + S+L A    G    ++G  +H  V K     
Sbjct: 391 DQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTG--NLQYGQSIHACVWKYGFET 448

Query: 122 DGLVSNVLIAMY--GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           D  VSN L+ MY    C+       +++E +  RDLISWN+ +S     G       +F 
Sbjct: 449 DVAVSNALVTMYMKNGCVHD---GTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFY 505

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL------------ 227
            M  EGF     PN YTF S++ +   S L   +  +Q+ A + K  L            
Sbjct: 506 HMLEEGF----IPNMYTFISILGSC--SCLFDVHYGRQVHAHIIKNQLDDNNFVCTALID 559

Query: 228 -------------------LSDLYVGSALVSGFARLGNFYYARKIFEQMIQK----NVVS 264
                              + DL+  + +++ +A+      A   F QM Q+    N  +
Sbjct: 560 MYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFT 619

Query: 265 MNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
           + G + G         G+++H  + +SG    + VG+ LV+MYAKCG ++++ ++F  +I
Sbjct: 620 LAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALI 679

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            +D+++WNT+I G  QNG   +A+  F  M  +G+     +    LS+C+  G +  G++
Sbjct: 680 RRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKE 739

Query: 379 IHGEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFF--LMPEHDQVSWNSVIGA 432
                 +  G+   V     ++ +    G     L+ F   +    + + W +V+GA
Sbjct: 740 HFNSMYRDFGISPTVDHCACMVDILGRVGKFDE-LEDFIQKMQLSQNALIWETVLGA 795



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 2/174 (1%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           ++++L  CAS  +L     +H   V+  +  D  +  +LV++Y+KC    YA      MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            R+V SW ++I G    G  + ++ LF +M+ +G +P+  T    L ACS    +D G K
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG-K 233

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
              + +   GL+  L   S +VDL  + GE++   +    MP   N + W  +L
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLL 286


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  579 bits (1493), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 332/978 (33%), Positives = 526/978 (53%), Gaps = 65/978 (6%)

Query: 4    AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
             K  H   +K     + F  NTL+N+Y + G +  A  +FD+M DRN  SW  ++SG+  
Sbjct: 166  GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225

Query: 64   KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQE--CGPSGFKFGMQVHCLVLKSNQTF 121
             G  ++A + F  M   G   + Y + S++ AC    C   G +   Q+H  V+K     
Sbjct: 226  VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGAR---QIHGYVVKCGLMS 282

Query: 122  DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
            +  V   L+  YG+   S   A ++FEEIE  +++SW S++  Y+  G T  V  ++  +
Sbjct: 283  NVFVGTSLLHFYGT-HGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHL 341

Query: 182  QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL-LSDLYVGSALVSG 240
            +  G    L     T  ++I      +     +  QIL  V K+GL  S + V ++L+S 
Sbjct: 342  RHNG----LICTGNTMATVIRTC--GMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISM 395

Query: 241  FARLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRK--------- 274
            F    +   A ++F  M +++ +S N ++                   RR          
Sbjct: 396  FGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITI 455

Query: 275  ---------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                           G+ +HG + +SGL   V V N L++MYA+ G+ +D+  VF  M  
Sbjct: 456  SALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPA 515

Query: 320  KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
            +D +SWN+M++   ++G Y  AI+    M +     +  +  + LS+C +L  + +   +
Sbjct: 516  RDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKI---V 572

Query: 380  HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
            H   +   +  ++ + N L+++Y   G +    KV  +MPE D V+WN++IG  AD +  
Sbjct: 573  HAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKD- 631

Query: 440  VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS-MGKLGHQVHAQVIKYNVANETTIEN 498
             +  ++ +  MRR G   N +T +N+L    S   + K G  +HA ++      +T +++
Sbjct: 632  PNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQS 691

Query: 499  ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
            +L++ Y +CG+++    IF  ++ + +  +WN++ S   H     +A+  +  M   G  
Sbjct: 692  SLITMYAQCGDLNTSSYIFDVLANK-NSSTWNAIFSANAHYGPGEEALKFIARMRNDGVD 750

Query: 559  LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
            LD F+F+  L+   ++  L+ G ++H+  ++   E D  + +A +DMY KCG ID   R 
Sbjct: 751  LDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRI 810

Query: 619  FDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLV 678
              +  +R+  SWN +IS  ARHG   +A   F +M   G  PDHVTFV +LSACSH GLV
Sbjct: 811  LPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLV 870

Query: 679  DEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
            DEG  +F SM+  +G+   +E   C++DLLGR+G L + E FI+KMP+ PN  +WR++L 
Sbjct: 871  DEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLA 930

Query: 739  AC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEV 797
            AC    N    ELGRKAA+ LFE+   +   YVL +N+ AS  +W DV   RK M+   +
Sbjct: 931  ACKVHGN---LELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSL 987

Query: 798  KKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEP 857
            KK+  CSW+ +K+ V  F  GD+ HP+   IY KL+EL +  R+ G++P T +AL D + 
Sbjct: 988  KKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPDTSYALQDTDE 1047

Query: 858  ESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRD 916
            E KE  +  HSE+IA+AF L  +++  P+RI KNLRVCGDCHS FK +SKIVGR+IV+RD
Sbjct: 1048 EQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIVVRD 1107

Query: 917  SNRFHHFNDGKCSCGDYW 934
            S RFHHF+ GKCSC DYW
Sbjct: 1108 SYRFHHFHGGKCSCSDYW 1125



 Score =  255 bits (652), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 188/690 (27%), Positives = 335/690 (48%), Gaps = 65/690 (9%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           ++ A+  H  ++K G   +VF+  +L++ Y   G ++ A+KLF+E+ + N VSW  ++  
Sbjct: 265 TEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVC 324

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN-Q 119
           Y   G + E   +++ +   G +     + +V+R C   G      G Q+   V+KS   
Sbjct: 325 YADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDK--TMGYQILGDVIKSGLD 382

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           T    V+N LI+M+G+  +S + A R+F  ++ RD ISWNSII+  +  G        F 
Sbjct: 383 TSSVSVANSLISMFGN-YDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFF 441

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL--QQILAMVKKAGLLSDLYVGSAL 237
            M+R       K +  T  +L+ A  S+     +L   + +  ++ K+GL S++ V ++L
Sbjct: 442 WMRRT----HPKTDYITISALLPACGSA----QHLKWGRGLHGLITKSGLESNVCVCNSL 493

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLM-----EGR-------------------- 272
           +S +A+ G+   A  +F  M  ++++S N +M     +G+                    
Sbjct: 494 LSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNY 553

Query: 273 -------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                         K K VH ++I   +   + +GN LV MY K G +D+++ V + M  
Sbjct: 554 VTFTTALSACYNLEKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPE 613

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML-GQQ 378
           +D V+WN +I G   +      I  F  MRR+GL+S+  ++++ L +C S  +++  G  
Sbjct: 614 RDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMP 673

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           IH   +  G + D  V ++L+++YA  G L+    +F ++   +  +WN++  A A    
Sbjct: 674 IHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHY-G 732

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
              EA+K+   MR  G   +  +F   LA   + ++   G Q+H+ +IK     +  + N
Sbjct: 733 PGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLN 792

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
           A +  YGKCGE+DD  +I   + + R + SWN +IS    +    +A      M+  G +
Sbjct: 793 ATMDMYGKCGEIDDVFRILP-IPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLK 851

Query: 559 LDHFTFATVLSACASVATLERGMEVHAC-----GVRACLEFDVVIGSALVDMYSKCGRID 613
            DH TF ++LSAC+    ++ G+   +      GV   +E  V I    +D+  + GR+ 
Sbjct: 852 PDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCI----IDLLGRSGRLA 907

Query: 614 YASRFFDLMPV-RNVYSWNSMISGYARHGH 642
            A  F D MPV  N + W S+++    HG+
Sbjct: 908 EAEGFIDKMPVPPNEFVWRSLLAACKVHGN 937



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 127/271 (46%), Gaps = 3/271 (1%)

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
           S  S G +G  +HA  +K  +   T   N L++ Y K G +   + +F +M +R D  SW
Sbjct: 158 SEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRND-ASW 216

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM-EVHACGV 588
           N+MISG++      KAM     M + G     +  A++++AC     +  G  ++H   V
Sbjct: 217 NNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVV 276

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
           +  L  +V +G++L+  Y   G +  A++ F+ +   N+ SW S++  YA +GH  + L 
Sbjct: 277 KCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLN 336

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           ++  ++ +G +    T   V+  C   G    G++    + +       +   + ++ + 
Sbjct: 337 IYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMF 396

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           G    +++     N M    +++ W +++ A
Sbjct: 397 GNYDSVEEASRVFNNMQ-ERDTISWNSIITA 426


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  576 bits (1484), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 324/898 (36%), Positives = 498/898 (55%), Gaps = 82/898 (9%)

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           +  F     +   +L  C  C     + G+Q+H  + KS  + D  + N LI +Y  C  
Sbjct: 49  KGNFTPTSVSYSKLLSQC--CTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC-R 105

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
               AR++ +E    DL+SW+++IS Y+Q G        F  M   G    +K NE+TF 
Sbjct: 106 XFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLG----VKCNEFTFS 161

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           S++ A   S++    + +Q+  +V  +G   D++V + LV  +A+   F  ++++F+++ 
Sbjct: 162 SVLKAC--SIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP 219

Query: 259 QKNVVSMNGL-----------------------------------------MEGRRKGKE 277
           ++NVVS N L                                         +    +GK 
Sbjct: 220 ERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKI 279

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +HGYLI+ G        N LV+MYAK G + D+ SVF  +   D VSWN +I+G   +  
Sbjct: 280 IHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEH 339

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
           +E+A+     M+R                           Q+H   +K+ ++SD+ VS  
Sbjct: 340 HEQALELLGQMKR---------------------------QLHSSLMKMDMESDLFVSVG 372

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+ +Y+    L      F L+PE D ++WN++I  ++     + EA+  +++M + G   
Sbjct: 373 LVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDM-EALSLFVEMHKEGIGF 431

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           N  T   IL + +   +  +  QVH   +K    ++  + N+L+  YGKC  ++D E+IF
Sbjct: 432 NQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIF 491

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
              +   D VS+ SMI+ Y       +A+ L   M     + D F  +++L+ACA+++  
Sbjct: 492 EECT-IGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAF 550

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
           E+G ++H   ++     D+  G++LV+MY+KCG ID A R F  +  R + SW++MI G 
Sbjct: 551 EQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGL 610

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
           A+HGHG +AL LF+QM  +G  P+H+T V VL AC+HAGLV E   +F+SM +++G  P 
Sbjct: 611 AQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPM 670

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
            E ++CM+DLLGRAG++++  E +NKMP   N+ +W  +LGA  R + +  ELGR+AA M
Sbjct: 671 QEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGA-ARIH-KDVELGRRAAEM 728

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           LF +EP+ +  +VLLAN+YAS GKWE+VA+ R+ M++++VKKE G SW+ +KD V+ F+ 
Sbjct: 729 LFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLV 788

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL 877
           GD SH     IY KL EL+  M  AGYVP  +  L D+E   KE L+ +HSEK+AVAF L
Sbjct: 789 GDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGL 848

Query: 878 TRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
               +  PIR+ KNLRVC DCH+AFK+I KIV REI++RD NRFHHF DG CSCGDYW
Sbjct: 849 IATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 906



 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 193/650 (29%), Positives = 326/650 (50%), Gaps = 30/650 (4%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  I K G + D  + N LIN+Y +      A KL DE  + + VSW+ ++SGY   G+
Sbjct: 78  IHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGL 137

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
              A   F EM   G   N +   SVL+AC        + G QVH +V+ S    D  V+
Sbjct: 138 GGGALMAFHEMHLLGVKCNEFTFSSVLKACSIV--KDLRIGKQVHGVVVVSGFEGDVFVA 195

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+ MY  C E  D ++R+F+EI  R+++SWN++ S Y Q         LF  M   G 
Sbjct: 196 NTLVVMYAKCDEFLD-SKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSG- 253

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              +KPNE++  S++ A   + L  S   + I   + K G   D +  +ALV  +A++G+
Sbjct: 254 ---IKPNEFSLSSMVNAC--TGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGD 308

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG--------------RRKGKEVHGYLIRSGLFDMVA 292
              A  +FE++ Q ++VS N ++ G               +  +++H  L++  +   + 
Sbjct: 309 LADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLF 368

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           V  GLV+MY+KC  ++D+R  F  +  KD ++WN +ISG  Q     EA+  F  M ++G
Sbjct: 369 VSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEG 428

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
           +  +  +L + L S A L  + + +Q+HG  +K G  SD+ V N+L+  Y    ++    
Sbjct: 429 IGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAE 488

Query: 413 KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
           ++F      D VS+ S+I A+A       EA+K +L+M+     P+     ++L A ++ 
Sbjct: 489 RIFEECTIGDLVSFTSMITAYAQY-GQGEEALKLFLEMQDMELKPDRFVCSSLLNACANL 547

Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
           S  + G Q+H  ++KY    +    N+L++ Y KCG +DD  + F+ ++E R  VSW++M
Sbjct: 548 SAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTE-RGIVSWSAM 606

Query: 533 ISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL 592
           I G   +    +A+ L   M++ G   +H T  +VL AC   A L    +++   +    
Sbjct: 607 IGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNH-AGLVTEAKLYFESMEELF 665

Query: 593 EFDVVIG--SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYAR 639
            F  +    + ++D+  + G+I+ A    + MP   N   W +++ G AR
Sbjct: 666 GFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALL-GAAR 714



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 151/596 (25%), Positives = 283/596 (47%), Gaps = 26/596 (4%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  ++  GF  DVF+ NTL+ +Y +  +   + +LFDE+P+RN VSW  + S Y  
Sbjct: 176 GKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQ 235

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                EA  +F EMV +G   N ++L S++ AC   G      G  +H  ++K    +D 
Sbjct: 236 XDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNAC--TGLRDSSRGKIIHGYLIKLGYDWDP 293

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
             +N L+ MY    +  D A  +FE+I+  D++SWN++I+            +L  +M+R
Sbjct: 294 FSANALVDMYAKVGDLAD-AISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR 352

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           +    SL   +      ++     + S   LL+    M        DL   +A++SG+++
Sbjct: 353 Q-LHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDA-RMAFNLLPEKDLIAWNAIISGYSQ 410

Query: 244 LGNFYYARKIFEQMIQK----NVVSMNGLMEGR------RKGKEVHGYLIRSGLFDMVAV 293
                 A  +F +M ++    N  +++ +++           ++VHG  ++SG    + V
Sbjct: 411 YWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYV 470

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
            N L++ Y KC  ++D+  +F      D VS+ +MI+   Q G  EEA+  F  M+   L
Sbjct: 471 VNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMEL 530

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
               F   S L++CA+L     G+Q+H   LK G   D+   N+L+++YA  G +    +
Sbjct: 531 KPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGR 590

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA---AS 470
            F  + E   VSW+++IG  A       +A++ +  M + G SPN +T +++L A   A 
Sbjct: 591 AFSELTERGIVSWSAMIGGLA-QHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAG 649

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
             +  KL  +   ++  +    E      ++   G+ G++++  ++  +M    +   W 
Sbjct: 650 LVTEAKLYFESMEELFGFKPMQEHYA--CMIDLLGRAGKINEAVELVNKMPFEANASVWG 707

Query: 531 SMI-SGYIHNEL-LPKAMNLVWFMMQRGQRLDHFTFATVLSACA---SVATLERGM 581
           +++ +  IH ++ L +    + F+++  +   H   A + ++     +VA + R M
Sbjct: 708 ALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLM 763



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/476 (24%), Positives = 222/476 (46%), Gaps = 81/476 (17%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S   K+ H  ++K G+ +D F  N L+++Y +VGDLA A  +F+++   + VSW  +++G
Sbjct: 274 SSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAG 333

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
                   +A ++  +M R                             Q+H  ++K +  
Sbjct: 334 CVLHEHHEQALELLGQMKR-----------------------------QLHSSLMKMDME 364

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D  VS  L+ MY  C +  + AR  F  +  +DLI+WN+IIS YSQ  + +    LF  
Sbjct: 365 SDLFVSVGLVDMYSKC-DLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVE 423

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M +EG  +    N+ T  +++ +  ++ L   ++ +Q+  +  K+G  SD+YV ++L+  
Sbjct: 424 MHKEGIGF----NQTTLSTILKS--TAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDS 477

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------------------------- 272
           + +  +   A +IFE+    ++VS   ++                               
Sbjct: 478 YGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVC 537

Query: 273 -------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                         +GK++H ++++ G    +  GN LVNMYAKCG+IDD+   F  +  
Sbjct: 538 SSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTE 597

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           +  VSW+ MI GL Q+G   +A+  F  M ++G+  ++ +L+S L +C   G ++   ++
Sbjct: 598 RGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAG-LVTEAKL 656

Query: 380 HGEGLK--LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           + E ++   G          ++ L   AG ++  +++   MP E +   W +++GA
Sbjct: 657 YFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGA 712



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 160/314 (50%), Gaps = 4/314 (1%)

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           AI+N   + +     ++ S    LS C +   +  G QIH    K GL  D S+ N L++
Sbjct: 42  AILNL--IDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLIN 99

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           LY+         K+     E D VSW+++I  +A +  L   A+  + +M   G   N  
Sbjct: 100 LYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQN-GLGGGALMAFHEMHLLGVKCNEF 158

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           TF ++L A S     ++G QVH  V+      +  + N L+  Y KC E  D +++F  +
Sbjct: 159 TFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEI 218

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
            E R+ VSWN++ S Y+  +   +A+ L + M+  G + + F+ +++++AC  +    RG
Sbjct: 219 PE-RNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRG 277

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
             +H   ++   ++D    +ALVDMY+K G +  A   F+ +   ++ SWN++I+G   H
Sbjct: 278 KIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLH 337

Query: 641 GHGDKALTLFSQMK 654
            H ++AL L  QMK
Sbjct: 338 EHHEQALELLGQMK 351


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 341/894 (38%), Positives = 477/894 (53%), Gaps = 70/894 (7%)

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           L RYA      A Q   P     G  +H  +LKS   F   + N LI+ Y  C     CA
Sbjct: 11  LTRYA------AAQALLP-----GAHLHANLLKSG--FLASLRNHLISFYSKCRRPC-CA 56

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           RR+F+EI     +SW+S+++ YS  G   S  + F  M+ EG    +  NE+    ++  
Sbjct: 57  RRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG----VCCNEFALPVVLKC 112

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNV 262
              + L       Q+ AM    G  SD++V +ALV+ +   G    AR++F++   ++N 
Sbjct: 113 VPDAQLGA-----QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNA 167

Query: 263 VSMNGLMEGRRK-----------------------------------------GKEVHGY 281
           VS NGLM    K                                         G++VH  
Sbjct: 168 VSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAM 227

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           ++R G    V   N LV+MY K G +D +  +F  M   D VSWN +ISG   NG    A
Sbjct: 228 VVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRA 287

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           I     M+  GL+ + F L S L +CA  G   LG+QIHG  +K   DSD  +   L+ +
Sbjct: 288 IELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDM 347

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           YA   +L   +KVF  M   D + WN++I   +       EA   +  +R+ G   N  T
Sbjct: 348 YAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHG-GRHDEAFSIFYGLRKEGLGVNRTT 406

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
              +L + +S        QVHA   K     +  + N L+  Y KC  + D  ++F   S
Sbjct: 407 LAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECS 466

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
              D ++  SMI+     +    A+ L   M+++G   D F  +++L+ACAS++  E+G 
Sbjct: 467 SG-DIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGK 525

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           +VHA  ++     D   G+ALV  Y+KCG I+ A   F  +P R V SW++MI G A+HG
Sbjct: 526 QVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHG 585

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
           HG +AL LF +M  +G  P+H+T   VL AC+HAGLVDE  ++F SM +++G+    E +
Sbjct: 586 HGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHY 645

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM 761
           SCM+DLLGRAG+LD   E +N MP   N+ +W  +LGA  R + +  ELG+ AA  LF +
Sbjct: 646 SCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGA-SRVH-KDPELGKLAAEKLFIL 703

Query: 762 EPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDES 821
           EP+ +  +VLLAN YAS G W +VAK RK MK++ +KKE   SWV +KD VH F+ GD+S
Sbjct: 704 EPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKS 763

Query: 822 HPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRN 880
           HP    IY KL EL   M  AGY+P     L DL+   KE L+S+HSE++AVAF +L+  
Sbjct: 764 HPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTP 823

Query: 881 SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
              PIR+ KNLR+C DCH AFKFIS IV REI++RD NRFHHF DG CSCGDYW
Sbjct: 824 PGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 202/696 (29%), Positives = 328/696 (47%), Gaps = 68/696 (9%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +LK GF     L N LI+ Y +      A ++FDE+PD   VSW+ +V+ Y++ G+
Sbjct: 26  LHANLLKSGFLAS--LRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGL 83

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
              A + F  M   G   N +AL  VL+    C P   + G QVH + + +    D  V+
Sbjct: 84  PRSAIQAFHGMRAEGVCCNEFALPVVLK----CVPDA-QLGAQVHAMAMATGFGSDVFVA 138

Query: 127 NVLIAMYGSCLESTDCARRIFEEIET-RDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           N L+AMYG      D ARR+F+E  + R+ +SWN ++S Y +        ++F  M   G
Sbjct: 139 NALVAMYGG-FGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197

Query: 186 FRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
               ++P E+ F  ++ A   S  + +G    +Q+ AMV + G   D++  +ALV  + +
Sbjct: 198 ----IQPTEFGFSCVVNACTGSRNIDAG----RQVHAMVVRMGYEKDVFTANALVDMYVK 249

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG-------RRK---------------------- 274
           +G    A  IFE+M   +VVS N L+ G        R                       
Sbjct: 250 MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSI 309

Query: 275 ------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                       G+++HG++I++       +G GLV+MYAK   +DD+  VF +M  +D 
Sbjct: 310 LKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDL 369

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           + WN +ISG    G ++EA   F  +R++GL  +  +L + L S ASL      +Q+H  
Sbjct: 370 ILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHAL 429

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
             K+G   D  V N L+  Y     LS  ++VF      D ++  S+I A +  +     
Sbjct: 430 AEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDH-GEG 488

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           A+K +++M R G  P+     ++L A +S S  + G QVHA +IK    ++    NAL+ 
Sbjct: 489 AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVY 548

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            Y KCG ++D E  F+ + E R  VSW++MI G   +    +A+ L   M+  G   +H 
Sbjct: 549 TYAKCGSIEDAELAFSSLPE-RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHI 607

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIG--SALVDMYSKCGRIDYASRFFD 620
           T  +VL AC     ++     +   ++     D      S ++D+  + G++D A    +
Sbjct: 608 TMTSVLCACNHAGLVDEAKR-YFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVN 666

Query: 621 LMPVR-NVYSWNSMISGYARHGHGDKALTLFSQMKL 655
            MP + N   W +++   A   H D  L   +  KL
Sbjct: 667 SMPFQANASVWGALLG--ASRVHKDPELGKLAAEKL 700



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 214/450 (47%), Gaps = 26/450 (5%)

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
           M S  ++   L+  A+   ++ G  +H   LK G  +  S+ N L+S Y+         +
Sbjct: 1   MRSAGTISQQLTRYAAAQALLPGAHLHANLLKSGFLA--SLRNHLISFYSKCRRPCCARR 58

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           VF  +P+   VSW+S++ A++++  L   A++ +  MR  G   N      +L       
Sbjct: 59  VFDEIPDPCHVSWSSLVTAYSNN-GLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD-- 115

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
             +LG QVHA  +     ++  + NAL++ YG  G MDD  ++F      R+ VSWN ++
Sbjct: 116 -AQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLM 174

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
           S Y+ N+    A+ +   M+  G +   F F+ V++AC     ++ G +VHA  VR   E
Sbjct: 175 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYE 234

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
            DV   +ALVDMY K GR+D AS  F+ MP  +V SWN++ISG   +GH  +A+ L  QM
Sbjct: 235 KDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS------CMVDL 707
           K  G +P+      +L AC+ AG  D G        Q++G + +    S       +VD+
Sbjct: 295 KSSGLVPNVFMLSSILKACAGAGAFDLG-------RQIHGFMIKANADSDDYIGVGLVDM 347

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN-A 766
             +   LD   +  + M    + ++W  ++  C     R  E    A ++ + +  +   
Sbjct: 348 YAKNHFLDDAMKVFDWMS-HRDLILWNALISGCSHGG-RHDE----AFSIFYGLRKEGLG 401

Query: 767 VNYVLLANMYASGGKWEDVAKARKAMKEAE 796
           VN   LA +  S    E  +  R+    AE
Sbjct: 402 VNRTTLAAVLKSTASLEAASATRQVHALAE 431



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 45/99 (45%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K  F  D F  N L+  Y + G +  A   F  +P+R  VSW+ ++ G 
Sbjct: 522 EQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGL 581

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G    A ++F  MV  G   N   + SVL AC   G
Sbjct: 582 AQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 620


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  573 bits (1476), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 317/894 (35%), Positives = 500/894 (55%), Gaps = 59/894 (6%)

Query: 88  ALGSVLRAC--QECGPSGFKFGM--QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           ALGS    C  Q C   G ++ +  ++H   +      D L+ N+LI +Y         A
Sbjct: 39  ALGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQ-A 97

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           R++F+E+ +RD +SW +++S Y+QRG     F+L+S+M       ++ P  Y   S+++A
Sbjct: 98  RQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWT----AVIPTPYVLSSVLSA 153

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
                L      + I A V K    S+ +VG+AL++ +   G+F  A ++F  M+  + V
Sbjct: 154 CTKGKLFAQG--RMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRV 211

Query: 264 SMNGLMEGR-----------------------------------------RKGKEVHGYL 282
           + N L+ G                                          +KGK++H YL
Sbjct: 212 TFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYL 271

Query: 283 IRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           +++G+ FD +  G+ L+++Y KCG I+ +  +F      + V WN M+    Q     ++
Sbjct: 272 LKAGMSFDYITEGS-LLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKS 330

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
              F  M+  G+  + F+    L +C   G I LG+QIH   +K G +SD+ VS  L+ +
Sbjct: 331 FEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDM 390

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y+    L +  K+  ++ + D VSW S+I  +   +    EA+  + +M+  G  P+ + 
Sbjct: 391 YSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHD-FCEEALATFKEMQDCGVWPDNIG 449

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
             +  +A +     + G Q+HA+V     A + +I N L++ Y +CG  ++   +F R  
Sbjct: 450 LASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLF-REI 508

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
           + +DE++WN +ISG+  + L  +A+ +   M Q G + + FTF + +SA A++A +++G 
Sbjct: 509 DHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGK 568

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           +VH   V+     +  + +AL+ +Y KCG I+ A   F  M +RN  SWN++I+  ++HG
Sbjct: 569 QVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHG 628

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
            G +AL LF QMK +G  P+ VTF+GVL+ACSH GLV+EG  +FKSMS VYGL P  + +
Sbjct: 629 RGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHY 688

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM 761
           +C+VD+LGRAG+LD+   F+++MPIT N++IWRT+L AC     +  E+G  AA  L E+
Sbjct: 689 ACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSAC--KVHKNIEIGELAAKHLLEL 746

Query: 762 EPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDES 821
           EP ++ +YVLL+N YA  GKW +  + RK MK+  ++KE G SW+ +K+ VH F  GD  
Sbjct: 747 EPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRL 806

Query: 822 HPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRN 880
           HP  D IY+ L ELN ++   GY  +      + E E K+     HSEK+AVAF ++T  
Sbjct: 807 HPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLP 866

Query: 881 SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             +P+R++KNLRVC DCHS  KF S++  REIVLRD  RFHHFN G CSCGDYW
Sbjct: 867 PCIPLRVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 197/683 (28%), Positives = 327/683 (47%), Gaps = 66/683 (9%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +  G   D  + N LI++Y + G +  A ++F E+  R+ VSW  ++SGY  +G+
Sbjct: 65  IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGL 124

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA +++ +M     +   Y L SVL AC +     F  G  +H  V K     +  V 
Sbjct: 125 GKEAFRLYSQMHWTAVIPTPYVLSSVLSACTK--GKLFAQGRMIHAQVYKQAFCSETFVG 182

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LIA+Y     S   A R+F ++   D +++N++IS ++Q G      ++F  MQ  G 
Sbjct: 183 NALIALYLG-FGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGL 241

Query: 187 RYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           R    P+  T  SL+ A  S   +  G    +Q+ + + KAG+  D     +L+  + + 
Sbjct: 242 R----PDCVTVASLLAACASVGDLQKG----KQLHSYLLKAGMSFDYITEGSLLDLYVKC 293

Query: 245 GNFYYARKIFEQMIQKNVVSMN-------------------GLMEGR------------- 272
           G+   A  IF    + NVV  N                   G M+               
Sbjct: 294 GDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCIL 353

Query: 273 ---------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      G+++H   I++G    + V   L++MY+K   +D +R +   +  +D V
Sbjct: 354 RTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVV 413

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SW +MI+G  Q+   EEA+  F  M+  G+   N  L S  S+CA +  +  G QIH   
Sbjct: 414 SWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARV 473

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
              G  +D+S+ N L++LYA  G       +F  +   D+++WN +I  F  S  L  +A
Sbjct: 474 YVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSR-LYEQA 532

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           +  ++ M +AG   N  TFI+ ++A ++ +  K G QVH + +K    +ET + NAL+S 
Sbjct: 533 LMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISL 592

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           YGKCG ++D + IF+ MS  R+EVSWN++I+    +    +A++L   M Q G + +  T
Sbjct: 593 YGKCGSIEDAKMIFSEMS-LRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVT 651

Query: 564 FATVLSACASVATLERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
           F  VL+AC+ V  +E G+       +  G+    +    +    VD+  + G++D A RF
Sbjct: 652 FIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACV----VDILGRAGQLDRARRF 707

Query: 619 FDLMPVR-NVYSWNSMISGYARH 640
            D MP+  N   W +++S    H
Sbjct: 708 VDEMPITANAMIWRTLLSACKVH 730



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 156/574 (27%), Positives = 277/574 (48%), Gaps = 54/574 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           ++ H Q+ K  F  + F+ N LI +Y+  G    A ++F +M   + V++  ++SG+   
Sbjct: 164 RMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQC 223

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G    A ++F EM  +G   +   + S+L AC   G    + G Q+H  +LK+  +FD +
Sbjct: 224 GHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGD--LQKGKQLHSYLLKAGMSFDYI 281

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
               L+ +Y  C +  + A  IF   +  +++ WN ++  Y Q  D    F++F +MQ  
Sbjct: 282 TEGSLLDLYVKCGD-IETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQAT 340

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLL-QQILAMVKKAGLLSDLYVGSALVSGFAR 243
           G    + PN++T+  ++    +   +G   L +QI ++  K G  SD+YV   L+  +++
Sbjct: 341 G----IHPNKFTYPCILR---TCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSK 393

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG-------------------------------- 271
                 ARKI E + +++VVS   ++ G                                
Sbjct: 394 YRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASA 453

Query: 272 ---------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                     R+G ++H  +  SG    +++ N LVN+YA+CG  +++ S+FR +  KD 
Sbjct: 454 ASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDE 513

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           ++WN +ISG  Q+  YE+A+M F  M + G   + F+ IS +S+ A+L  I  G+Q+HG 
Sbjct: 514 ITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGR 573

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            +K G  S+  V+NAL+SLY   G +     +F  M   ++VSWN++I +         E
Sbjct: 574 AVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITS-CSQHGRGLE 632

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA-LL 501
           A+  +  M++ G  PN VTFI +LAA S   + + G      +      N      A ++
Sbjct: 633 ALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVV 692

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
              G+ G++D   +    M    + + W +++S 
Sbjct: 693 DILGRAGQLDRARRFVDEMPITANAMIWRTLLSA 726



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 22/233 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H + +K G   +  + N LI++Y + G +  A  +F EM  RN VSW  I++  
Sbjct: 565 KQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSC 624

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQ-----ECGPSGFKFGMQVHCLVLK 116
           +  G   EA  +F +M + G   N      VL AC      E G S FK    V+ L   
Sbjct: 625 SQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGL--- 681

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE-TRDLISWNSIISVYSQRGDTISVF 175
            N   D     V I      L   D ARR  +E+  T + + W +++S   +    I + 
Sbjct: 682 -NPIPDHYACVVDILGRAGQL---DRARRFVDEMPITANAMIWRTLLSA-CKVHKNIEIG 736

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL-LQQILAMVKKAGL 227
           +L ++   E     L+P++     L++ AY+  ++G +    Q+  M+K  G+
Sbjct: 737 ELAAKHLLE-----LEPHDSASYVLLSNAYA--VTGKWANRDQVRKMMKDRGI 782


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 325/950 (34%), Positives = 525/950 (55%), Gaps = 60/950 (6%)

Query: 29  VYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYA 88
           +Y + G +  A  +FD+MP+RN  SW  ++SG+   G   +A + F  M+  G   + Y 
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE 148
             S++ AC   G    +   QVH  V+K     D  V   L+  YG+     +    +F+
Sbjct: 61  AASLVTACDRSGCMT-EGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAE-VDMVFK 118

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
           EIE  +++SW S++  Y+  G    V  ++ R++R+G    +  NE    ++I +    V
Sbjct: 119 EIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDG----VYCNENAMATVIRSC--GV 172

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
           L    L  Q+L  V K+GL + + V ++L+S F    +   A  +F+ M +++ +S N +
Sbjct: 173 LVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSI 232

Query: 269 M-----------------------------------------EGRRKGKEVHGYLIRSGL 287
           +                                         +  R G+ +HG +++SGL
Sbjct: 233 ITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGL 292

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
              V V N L++MY++ G  +D+  VF  M  +D +SWN+M++    NG Y  A+     
Sbjct: 293 ESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIE 352

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M +    ++  +  + LS+C +L  + +   +H   + LGL  ++ + NAL+++Y   G 
Sbjct: 353 MLQTRKATNYVTFTTALSACYNLETLKI---VHAFVILLGLHHNLIIGNALVTMYGKFGS 409

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           ++   +V  +MP+ D+V+WN++IG  AD++   + A++ +  +R  G   N +T +N+L+
Sbjct: 410 MAAAQRVCKIMPDRDEVTWNALIGGHADNKE-PNAAIEAFNLLREEGVPVNYITIVNLLS 468

Query: 468 A-ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           A  S   +   G  +HA ++      ET ++++L++ Y +CG+++    IF  ++ + + 
Sbjct: 469 AFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANK-NS 527

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
            +WN+++S   H     +A+ L+  M   G  LD F+F+   +   ++  L+ G ++H+ 
Sbjct: 528 STWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSL 587

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            ++   E +  + +A +DMY KCG ID   R       R+  SWN +IS  ARHG   +A
Sbjct: 588 IIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQA 647

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
              F +M   G  PDHVTFV +LSACSH GLVDEG  +F SMS  +G+   +E   C++D
Sbjct: 648 REAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIID 707

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQN 765
           LLGRAG+L + E FINKMP+ P  L+WR++L AC    N    EL RKAA+ LFE++  +
Sbjct: 708 LLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGN---LELARKAADRLFELDSSD 764

Query: 766 AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
              YVL +N+ AS  +W DV   RK M+   +KK+  CSWV +K+ V  F  GD+ HP+ 
Sbjct: 765 DSAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQN 824

Query: 826 DLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LP 884
             IY KL+EL + +R+AGY+P T ++L D + E KE  +  HSE+IA+AF L  +S+  P
Sbjct: 825 AEIYAKLEELKKIIREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSP 884

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +RI KNLRVCGDCHS FK +S+I+GR+I+LRD+ RFHHF+ GKCSC DYW
Sbjct: 885 LRIFKNLRVCGDCHSVFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSDYW 934



 Score =  248 bits (634), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 185/680 (27%), Positives = 325/680 (47%), Gaps = 60/680 (8%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K G A DVF+  +L++ Y   G +A    +F E+ + N VSW  ++ GY + G  
Sbjct: 82  HAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCV 141

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            E   +++ + R G   N  A+ +V+R+C          G QV   V+KS       V+N
Sbjct: 142 KEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDK--MLGYQVLGSVIKSGLDTTVSVAN 199

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI+M+G+C +S + A  +F++++ RD ISWNSII+     G      + FS+M     R
Sbjct: 200 SLISMFGNC-DSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQM-----R 253

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           Y+    +Y   S +     S  +  +  + +  MV K+GL S++ V ++L+S +++ G  
Sbjct: 254 YTHAKTDYITISALLPVCGSAQNLRW-GRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKS 312

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGR-------------------RKG------------- 275
             A  +F +M +++++S N +M                      RK              
Sbjct: 313 EDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSAC 372

Query: 276 ------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
                 K VH ++I  GL   + +GN LV MY K G++  ++ V + M  +D V+WN +I
Sbjct: 373 YNLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALI 432

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM-LGQQIHGEGLKLGL 388
            G   N     AI  F  +R +G+  +  ++++ LS+  S   ++  G  IH   +  G 
Sbjct: 433 GGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGF 492

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           + +  V ++L+++YA  G L+    +F ++   +  +WN+++ A A       EA+K  +
Sbjct: 493 ELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHY-GPGEEALKLII 551

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            MR  G   +  +F    A   + ++   G Q+H+ +IK+   +   + NA +  YGKCG
Sbjct: 552 KMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCG 611

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
           E+DD  +I  +    R + SWN +IS    +    +A      M+  G R DH TF ++L
Sbjct: 612 EIDDVFRILPQ-PRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLL 670

Query: 569 SACASVATLERGMEVHAC-----GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           SAC+    ++ G+   +      GV   +E  V I    +D+  + G++  A  F + MP
Sbjct: 671 SACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCI----IDLLGRAGKLTEAENFINKMP 726

Query: 624 VRNV-YSWNSMISGYARHGH 642
           V      W S+++    HG+
Sbjct: 727 VPPTDLVWRSLLAACKIHGN 746



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 123/280 (43%), Gaps = 29/280 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K+ H  ++  G  +++ + N L+ +Y + G +A+A ++   MPDR+ V+W  ++ G+   
Sbjct: 379 KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADN 438

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSG-FKFGMQVHCLVLKSNQTFDG 123
              N A + F  +   G  +N   + ++L A     P      GM +H  ++ +    + 
Sbjct: 439 KEPNAAIEAFNLLREEGVPVNYITIVNLLSAF--LSPDDLLDHGMPIHAHIVVAGFELET 496

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V + LI MY  C +  + +  IF+ +  ++  +WN+I+S  +  G      KL  +M+ 
Sbjct: 497 FVQSSLITMYAQCGD-LNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRN 555

Query: 184 EGF---RYSLKPNEYTFGSLITAAYSSVL----------SGSYLLQQILAMVKKAGLLSD 230
           +G    ++S        G+L        L          S  Y+L   + M  K G + D
Sbjct: 556 DGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDD 615

Query: 231 LY------------VGSALVSGFARLGNFYYARKIFEQMI 258
           ++              + L+S  AR G F  AR+ F +M+
Sbjct: 616 VFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEML 655



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 47/98 (47%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H  I+KHGF  + ++ N  +++Y + G++    ++  +   R+  SW  ++S   
Sbjct: 580 EGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALA 639

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
             G   +A + F EM+  G   +     S+L AC   G
Sbjct: 640 RHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGG 677


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 327/1015 (32%), Positives = 549/1015 (54%), Gaps = 100/1015 (9%)

Query: 4    AKLFHLQILKHGFAYDVFLCNTLINVYVRVG---DLASASKLFDEMPDRNSVSWACIVSG 60
             K  H Q++ +G+  D +L   ++ +Y R G   DL  A KLF+EMP+RN  +W  ++  
Sbjct: 90   GKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILA 149

Query: 61   YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGM-QVHCLVLKSNQ 119
            Y       E  +++  M  +G   +++   SV++AC      G   G+ Q+   V+K+  
Sbjct: 150  YARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMG---GVRQLQSSVVKAGL 206

Query: 120  TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
              +  V   L+  Y       D A    +EIE   +++WN++I+ Y +       + +F 
Sbjct: 207  NCNLFVGGALVDGYAR-FGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFD 265

Query: 180  RMQREGFRYSLKPNEYTFGSL--ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
            RM + G    + P+ +TF S   +  A  S   G  +  +++A     G   D +VG+AL
Sbjct: 266  RMLKIG----VCPDNFTFASALRVCGALRSRDGGKQVHSKLIA----CGFKGDTFVGNAL 317

Query: 238  VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR------------------------ 273
            +  +A+  +     K+F++M ++N V+ N ++                            
Sbjct: 318  IDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNR 377

Query: 274  -----------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                             KG+E+HG+L+R+ L   + +G+ LV+MY+KCG ++++  VFR 
Sbjct: 378  FNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRS 437

Query: 317  MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR-RDGLMSSNFSLISTLSSCASLGWIML 375
            ++ ++ VS+N +++G  Q G  EEA+  +  M+  DG+    F+  + L+ CA+      
Sbjct: 438  LLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQ 497

Query: 376  GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
            G+QIH   ++  +  ++ V   L+ +Y++ G L+   ++F  M E +  SWNS+I  +  
Sbjct: 498  GRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQ 557

Query: 436  SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
            +     EA++ +  M+  G  P+  +  ++L++  S S  + G ++H  +++  +  E  
Sbjct: 558  N-GETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGI 616

Query: 496  IENALLSCYGKCGEMD-------------------------------DCEKIFARMSERR 524
            ++  L+  Y KCG MD                               D + +F +M E+R
Sbjct: 617  LQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQM-EQR 675

Query: 525  DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
            +   WNS+++GY +  L  ++ N    M++     D  T  T+++ C+S+  LE G ++H
Sbjct: 676  NTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLH 735

Query: 585  ACGVR-ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
            +  ++   +   VV+ +ALVDMYSKCG I  A   FD M  +N+ SWN+MISGY++HG  
Sbjct: 736  SLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCS 795

Query: 644  DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC 703
             +AL L+ +M   G  P+ VTF+ +LSACSH GLV+EG + F SM + Y +  + E ++C
Sbjct: 796  KEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTC 855

Query: 704  MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP 763
            MVDLLGRAG L+  +EF+ KMPI P    W  +LGA CR + +  ++GR AA  LFE++P
Sbjct: 856  MVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGA-CRVH-KDMDMGRLAAQRLFELDP 913

Query: 764  QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHP 823
            QN   YV+++N+YA+ G+W++V   R+ MK   VKK+ G SW+ +   + +F AG ++HP
Sbjct: 914  QNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHP 973

Query: 824  EKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSY---HSEKIAVAF-VLTR 879
            + + IY  L+ L  + +  GY+P T F L +++   +E+   Y   HSE++A++  +++ 
Sbjct: 974  KTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISL 1033

Query: 880  NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
              K  IR+ KNLR+CGDCH+A KFISKI GR I+ RD+NRFHHF +GKCSCGDYW
Sbjct: 1034 PKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 1088



 Score =  298 bits (764), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 218/795 (27%), Positives = 384/795 (48%), Gaps = 105/795 (13%)

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG--SCLESTD 141
           +N     S+++ C +   + F+ G  +H  ++ +    D  +   ++ +Y    CL+   
Sbjct: 69  VNPLPYSSLIQDCID--SNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLC 126

Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
            AR++FEE+  R+L +WN++I  Y++  D + V +L+ RM+  G  +S   +++TF S+I
Sbjct: 127 YARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSG-NFS---DKFTFPSVI 182

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG---------------- 245
            A  +    G   ++Q+ + V KAGL  +L+VG ALV G+AR G                
Sbjct: 183 KACIAMEDMGG--VRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTS 240

Query: 246 ---------------NFYYARKIFEQMIQKNVVSMN----------GLMEGRRKGKEVHG 280
                          ++  A  IF++M++  V   N          G +  R  GK+VH 
Sbjct: 241 VVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHS 300

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
            LI  G      VGN L++MYAKC   +    VF  M  ++ V+WN++IS   Q G + +
Sbjct: 301 KLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFND 360

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A++ F  M+  G  S+ F+L S L + A L  I  G+++HG  ++  L+SD+ + +AL+ 
Sbjct: 361 ALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVD 420

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR-RAGWSPNG 459
           +Y+  G +    +VF  + E ++VS+N+++  +   E    EA++ Y DM+   G  P+ 
Sbjct: 421 MYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYV-QEGKAEEALELYHDMQSEDGIQPDQ 479

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
            TF  +L   ++      G Q+HA +I+ N+     +E  L+  Y +CG ++  ++IF R
Sbjct: 480 FTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNR 539

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           M+E R+  SWNSMI GY  N    +A+ L   M   G + D F+ +++LS+C S++  ++
Sbjct: 540 MAE-RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQK 598

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G E+H   VR  +E + ++   LVDMY+KCG +DYA + +D    ++V   N M+S +  
Sbjct: 599 GRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVN 658

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM----------- 688
            G  + A  LF QM+      +   +  +L+  ++ GL  E F HF  M           
Sbjct: 659 SGRANDAKNLFDQMEQR----NTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLT 714

Query: 689 -----------------SQVYGLIPQLEQFSC-------MVDLLGRAGELDKIEEFINKM 724
                             Q++ LI +    +C       +VD+  + G + K     + M
Sbjct: 715 MVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNM 774

Query: 725 PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ-----NAVNYVLLANMYASG 779
               N + W  ++    +  C K  L      +L+E  P+     N V ++ + +  +  
Sbjct: 775 N-GKNIVSWNAMISGYSKHGCSKEAL------ILYEEMPKKGMYPNEVTFLAILSACSHT 827

Query: 780 GKWEDVAKARKAMKE 794
           G  E+  +   +M+E
Sbjct: 828 GLVEEGLRIFTSMQE 842


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 329/883 (37%), Positives = 492/883 (55%), Gaps = 57/883 (6%)

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           S+LR C             +H L++K     D  +   L+ +Y  C  S   AR +  ++
Sbjct: 117 SMLREC--ASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSA-YARLVLAKM 173

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLS 210
             RD++SW ++I      G       LF  MQ EG    + PNE+T  + + A   S+  
Sbjct: 174 PDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEG----IMPNEFTLATGLKAC--SLCM 227

Query: 211 GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
              L +Q+ A   K GLL DL+VGSALV  +A+ G    A K+F  M ++N V+ N L+ 
Sbjct: 228 ALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLN 287

Query: 271 GR-----------------------------------------RKGKEVHGYLIRSGLFD 289
           G                                          ++G+ +H  +I+ G   
Sbjct: 288 GYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEG 347

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
              +G GLV+MY+KCG   D+  VF+ +   D V W+ +I+ LDQ G  EE+I  F  MR
Sbjct: 348 NEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMR 407

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
               + + +++ S LS+  + G +  GQ IH    K G ++DV+VSNAL+++Y   G + 
Sbjct: 408 LGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVH 467

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
              K++  M + D +SWN+ +    D   +    +  +  M   G+ PN  TFI+IL + 
Sbjct: 468 DGTKLYESMVDRDLISWNAYLSGLHDC-GMYDRPLTIFYHMLEEGFIPNMYTFISILGSC 526

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
           S       G QVHA +IK  + +   +  AL+  Y KC  ++D +  F R+S  RD  +W
Sbjct: 527 SCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLS-VRDLFTW 585

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
             +I+ Y       KA+N    M Q G + + FT A  LS C+S+A+LE G ++H+   +
Sbjct: 586 TVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFK 645

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
           +    D+ +GSALVDMY+KCG ++ A   F+ +  R+  +WN++I GYA++G G+KALT 
Sbjct: 646 SGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTA 705

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           F  M  +G  PD VTF G+LSACSH GLV+EG +HF SM + +G+ P ++  +CMVD+LG
Sbjct: 706 FRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILG 765

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
           R G+ D++E+FI KM ++ N+LIW TVLGA    N     LG KAAN LFE++P+   +Y
Sbjct: 766 RVGKFDELEDFIQKMQLSQNALIWETVLGASKMHN--NLVLGEKAANKLFELQPEEESSY 823

Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIY 829
           +LL+N++A+ G+W+DV + R  M    VKKE GCSWV     VH FV+ D SHP+   I+
Sbjct: 824 ILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIH 883

Query: 830 EKLKELNQKMRDAGYVPQTKFALFDL-EPESKEDLVSYHSEKIAVAFVL-TRNSKLPIRI 887
            KL EL++++    YVP+T++ L ++ E E KE+L  +HSE++A+ F L + +S+  IRI
Sbjct: 884 LKLDELDRELASIQYVPKTEYVLHNVGETEKKENL-RFHSERLALGFALISTSSEKKIRI 942

Query: 888 MKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
            KNLR+C DCH   K IS I  +EIV+RD  RFHHF +G CSC
Sbjct: 943 FKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985



 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 189/690 (27%), Positives = 321/690 (46%), Gaps = 59/690 (8%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  I+K     D  L  +L+NVY +    A A  +  +MPDR+ VSW  ++ G   
Sbjct: 131 AKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVA 190

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           +G +N++  +F+EM   G + N + L + L+AC  C       G Q+H    K     D 
Sbjct: 191 EGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLC--MALDLGKQMHAQAFKLGLLLDL 248

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V + L+ +Y  C E  + A ++F  +  ++ ++WN +++ Y+QRGD   V KLF  M  
Sbjct: 249 FVGSALVDLYAKCGE-IELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSM-- 305

Query: 184 EGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
                 +K NE+T  +++   A S  L      Q I +++ K G   + ++G  LV  ++
Sbjct: 306 --MELDVKCNEFTLTTVLKGCANSKNLKQG---QVIHSLIIKCGYEGNEFIGCGLVDMYS 360

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLM-----EGRRK----------------------- 274
           + G    A  +F+ + + ++V  + L+     +G+ +                       
Sbjct: 361 KCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICS 420

Query: 275 -------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                        G+ +H  + + G    VAV N LV MY K G + D   ++  M+ +D
Sbjct: 421 LLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRD 480

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            +SWN  +SGL   G Y+  +  F  M  +G + + ++ IS L SC+ L  +  G+Q+H 
Sbjct: 481 LISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHA 540

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             +K  LD +  V  AL+ +YA   YL      F  +   D  +W  +I  +A +     
Sbjct: 541 HIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQ-GE 599

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           +A+ Y+  M++ G  PN  T    L+  SS +  + G Q+H+ V K    ++  + +AL+
Sbjct: 600 KALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALV 659

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
             Y KCG M++ E +F  +  RRD ++WN++I GY  N    KA+     M+  G   D 
Sbjct: 660 DMYAKCGCMEEAEALFEALI-RRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDG 718

Query: 562 FTFATVLSACASVATLERGMEVHACGVRAC-LEFDVVIGSALVDMYSKCGRIDYASRFFD 620
            TF  +LSAC+    +E G E      R   +   V   + +VD+  + G+ D    F  
Sbjct: 719 VTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQ 778

Query: 621 LMPV-RNVYSWNSMISGYARHGH---GDKA 646
            M + +N   W +++     H +   G+KA
Sbjct: 779 KMQLSQNALIWETVLGASKMHNNLVLGEKA 808



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 161/613 (26%), Positives = 297/613 (48%), Gaps = 58/613 (9%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H Q  K G   D+F+ + L+++Y + G++  ASK+F  MP++N V+W  +++GY  
Sbjct: 232 GKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQ 291

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           +G      K+F  M+      N + L +VL+ C        K G  +H L++K     + 
Sbjct: 292 RGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGC--ANSKNLKQGQVIHSLIIKCGYEGNE 349

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            +   L+ MY  C  + D A  +F+ I+  D++ W+++I+   Q+G +    KLF  M R
Sbjct: 350 FIGCGLVDMYSKCGLAID-AIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLM-R 407

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G      PN+YT  SL++AA ++        Q I A V K G  +D+ V +ALV+ + +
Sbjct: 408 LG---DTLPNQYTICSLLSAATNT--GNLQYGQSIHACVWKYGFETDVAVSNALVTMYMK 462

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------------------------- 274
            G  +   K++E M+ ++++S N  + G                                
Sbjct: 463 NGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISI 522

Query: 275 ------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                       G++VH ++I++ L D   V   L++MYAKC  ++D+   F  +  +D 
Sbjct: 523 LGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDL 582

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
            +W  +I+   Q    E+A+  F  M+++G+  + F+L   LS C+SL  +  GQQ+H  
Sbjct: 583 FTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSM 642

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
             K G  SD+ V +AL+ +YA  G +     +F  +   D ++WN++I  +A +    ++
Sbjct: 643 VFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQN-GQGNK 701

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--AL 500
           A+  +  M   G SP+GVTF  IL+A S   + + G + H   +  +     T+++   +
Sbjct: 702 ALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKE-HFNSMYRDFGISPTVDHCACM 760

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI-SGYIHNELL--PKAMNLVWFMMQRGQ 557
           +   G+ G+ D+ E    +M   ++ + W +++ +  +HN L+   KA N + F +Q  +
Sbjct: 761 VDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKL-FELQPEE 819

Query: 558 RLDHFTFATVLSA 570
              +   + + + 
Sbjct: 820 ESSYILLSNIFAT 832



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 194/420 (46%), Gaps = 54/420 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  ++ H  I+K G+  + F+   L+++Y + G    A  +F  +   + V W+ +++  
Sbjct: 331 KQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCL 390

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
             +G S E+ K+F  M     L N+Y + S+L A    G    ++G  +H  V K     
Sbjct: 391 DQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTG--NLQYGQSIHACVWKYGFET 448

Query: 122 DGLVSNVLIAMY--GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           D  VSN L+ MY    C+       +++E +  RDLISWN+ +S     G       +F 
Sbjct: 449 DVAVSNALVTMYMKNGCVHD---GTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFY 505

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL------------ 227
            M  EGF     PN YTF S++ +   S L   +  +Q+ A + K  L            
Sbjct: 506 HMLEEGF----IPNMYTFISILGSC--SCLFDVHYGRQVHAHIIKNQLDDNNFVCTALID 559

Query: 228 -------------------LSDLYVGSALVSGFARLGNFYYARKIFEQMIQK----NVVS 264
                              + DL+  + +++ +A+      A   F QM Q+    N  +
Sbjct: 560 MYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFT 619

Query: 265 MNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
           + G + G         G+++H  + +SG    + VG+ LV+MYAKCG ++++ ++F  +I
Sbjct: 620 LAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALI 679

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            +D+++WNT+I G  QNG   +A+  F  M  +G+     +    LS+C+  G +  G++
Sbjct: 680 RRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKE 739



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 2/174 (1%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           ++++L  CAS  +L     +H   V+  +  D  +  +LV++Y+KC    YA      MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            R+V SW ++I G    G  + ++ LF +M+ +G +P+  T    L ACS    +D G K
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG-K 233

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
              + +   GL+  L   S +VDL  + GE++   +    MP   N + W  +L
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLL 286


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 317/894 (35%), Positives = 499/894 (55%), Gaps = 59/894 (6%)

Query: 88  ALGSVLRAC--QECGPSGFKFGM--QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           ALGS    C  Q C   G ++ +  ++H   +      D L+ N+LI +Y         A
Sbjct: 39  ALGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQ-A 97

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           R++F+E+ +RD +SW +++S Y+Q G     F+L+S+M       ++ P  Y   S+++A
Sbjct: 98  RQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWT----AVIPTPYVLSSVLSA 153

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
                L      + I A V K    S+ +VG+AL++ +   G+F  A ++F  M+  + V
Sbjct: 154 CTKGKLFAQG--RMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRV 211

Query: 264 SMNGLMEGR-----------------------------------------RKGKEVHGYL 282
           + N L+ G                                          +KGK++H YL
Sbjct: 212 TFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYL 271

Query: 283 IRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           +++G+ FD +  G+ L+++Y KCG I+ +  +F      + V WN M+    Q     ++
Sbjct: 272 LKAGMSFDYITEGS-LLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKS 330

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
              F  M+  G+  + F+    L +C   G I LG+QIH   +K G +SD+ VS  L+ +
Sbjct: 331 FEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDM 390

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y+  G L +  K+  ++ + D VSW S+I  +   +    EA+  + +M+  G  P+ + 
Sbjct: 391 YSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHD-FCEEALATFKEMQDCGVWPDNIG 449

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
             +  +A +     + G Q+HA+V     A + +I N L++ Y +CG  ++   +F R  
Sbjct: 450 LASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLF-REI 508

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
           E +DE++WN +ISG+  + L  +A+ +   M Q G + + FTF + +SA A++A +++G 
Sbjct: 509 EHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGK 568

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           +VH   V+     +  + +AL+ +Y KCG I+ A   F  M +RN  SWN++I+  ++HG
Sbjct: 569 QVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHG 628

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
            G +AL LF QMK +G  P+ VTF+GVL+ACSH GLV+EG  +FKSMS VYGL P  + +
Sbjct: 629 RGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHY 688

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM 761
           +C+VD+LGRAG+LD+   F+++MPIT N++IWRT+L AC     +  E+G  AA  L E+
Sbjct: 689 ACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSAC--KVHKNIEIGELAAKHLLEL 746

Query: 762 EPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDES 821
           EP ++ +YVLL+N YA  GKW +  + RK MK+  ++KE G SW+ +K+ VH F  GD  
Sbjct: 747 EPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRL 806

Query: 822 HPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRN 880
           HP  D IY+ L ELN ++   GY  +      + E E K+     HSEK+AVAF ++T  
Sbjct: 807 HPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLP 866

Query: 881 SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             +P+R++KNLRVC DCHS  K  S++  REIVLRD  RFHHFN G CSCGDYW
Sbjct: 867 PCIPLRVIKNLRVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  279 bits (713), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 198/683 (28%), Positives = 327/683 (47%), Gaps = 66/683 (9%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +  G   D  + N LI++Y + G +  A ++F E+  R+ VSW  ++SGY   G+
Sbjct: 65  IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGL 124

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA +++ +M     +   Y L SVL AC +     F  G  +H  V K     +  V 
Sbjct: 125 GKEAFRLYSQMHWTAVIPTPYVLSSVLSACTK--GKLFAQGRMIHAQVYKQAFCSETFVG 182

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LIA+Y     S   A R+F ++   D +++N++IS ++Q G      ++F  MQ  G 
Sbjct: 183 NALIALYLG-FGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGL 241

Query: 187 RYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           R    P+  T  SL+ A  S   +  G    +Q+ + + KAG+  D     +L+  + + 
Sbjct: 242 R----PDCVTVASLLAACASVGDLQKG----KQLHSYLLKAGMSFDYITEGSLLDLYVKC 293

Query: 245 GNFYYARKIFEQMIQKNVVSMN-------------------GLMEGR------------- 272
           G+   A  IF    + NVV  N                   G M+               
Sbjct: 294 GDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCIL 353

Query: 273 ---------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      G+++H   I++G    + V   L++MY+K G +D +R +   +  +D V
Sbjct: 354 RTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVV 413

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SW +MI+G  Q+   EEA+  F  M+  G+   N  L S  S+CA +  +  G QIH   
Sbjct: 414 SWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARV 473

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
              G  +D+S+ N L++LYA  G       +F  +   D+++WN +I  F  S  L  +A
Sbjct: 474 YVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSR-LYKQA 532

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           +  ++ M +AG   N  TFI+ ++A ++ +  K G QVH + +K    +ET + NAL+S 
Sbjct: 533 LMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISL 592

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           YGKCG ++D + IF+ MS  R+EVSWN++I+    +    +A++L   M Q G + +  T
Sbjct: 593 YGKCGSIEDAKMIFSEMS-LRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVT 651

Query: 564 FATVLSACASVATLERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
           F  VL+AC+ V  +E G+       +  G+    +    +    VD+  + G++D A RF
Sbjct: 652 FIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACV----VDILGRAGQLDRARRF 707

Query: 619 FDLMPVR-NVYSWNSMISGYARH 640
            D MP+  N   W +++S    H
Sbjct: 708 VDEMPITANAMIWRTLLSACKVH 730



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 156/574 (27%), Positives = 278/574 (48%), Gaps = 54/574 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           ++ H Q+ K  F  + F+ N LI +Y+  G    A ++F +M   + V++  ++SG+   
Sbjct: 164 RMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQC 223

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G    A ++F EM  +G   +   + S+L AC   G    + G Q+H  +LK+  +FD +
Sbjct: 224 GHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGD--LQKGKQLHSYLLKAGMSFDYI 281

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
               L+ +Y  C +  + A  IF   +  +++ WN ++  Y Q  D    F++F +MQ  
Sbjct: 282 TEGSLLDLYVKCGD-IETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQAT 340

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLL-QQILAMVKKAGLLSDLYVGSALVSGFAR 243
           G    + PN++T+  ++    +   +G   L +QI ++  K G  SD+YV   L+  +++
Sbjct: 341 G----IHPNQFTYPCILR---TCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSK 393

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG-------------------------------- 271
            G    ARKI E + +++VVS   ++ G                                
Sbjct: 394 YGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASA 453

Query: 272 ---------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                     R+G ++H  +  SG    +++ N LVN+YA+CG  +++ S+FR +  KD 
Sbjct: 454 ASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDE 513

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           ++WN +ISG  Q+  Y++A+M F  M + G   + F+ IS +S+ A+L  I  G+Q+HG 
Sbjct: 514 ITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGR 573

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            +K G  S+  V+NAL+SLY   G +     +F  M   ++VSWN++I +         E
Sbjct: 574 AVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITS-CSQHGRGLE 632

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA-LL 501
           A+  +  M++ G  PN VTFI +LAA S   + + G      +      N      A ++
Sbjct: 633 ALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVV 692

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
              G+ G++D   +    M    + + W +++S 
Sbjct: 693 DILGRAGQLDRARRFVDEMPITANAMIWRTLLSA 726



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 22/233 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H + +K G   +  + N LI++Y + G +  A  +F EM  RN VSW  I++  
Sbjct: 565 KQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSC 624

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQ-----ECGPSGFKFGMQVHCLVLK 116
           +  G   EA  +F +M + G   N      VL AC      E G S FK    V+ L   
Sbjct: 625 SQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGL--- 681

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE-TRDLISWNSIISVYSQRGDTISVF 175
            N   D     V I      L   D ARR  +E+  T + + W +++S   +    I + 
Sbjct: 682 -NPIPDHYACVVDILGRAGQL---DRARRFVDEMPITANAMIWRTLLSA-CKVHKNIEIG 736

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL-LQQILAMVKKAGL 227
           +L ++   E     L+P++     L++ AY+  ++G +    Q+  M+K  G+
Sbjct: 737 ELAAKHLLE-----LEPHDSASYVLLSNAYA--VTGKWANRDQVRKMMKDRGI 782


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 333/871 (38%), Positives = 470/871 (53%), Gaps = 59/871 (6%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G  +H  +LKS         N LI+ Y  C     CARR+F+EI     +SW+S+++ YS
Sbjct: 23  GAHLHASLLKSGSL--ASFRNHLISFYSKCRRPC-CARRVFDEIPDPCHVSWSSLVTAYS 79

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
             G   S  + F  M+ EG    +  NE+    ++     + L       Q+ AM    G
Sbjct: 80  NNGLPRSAIQAFHGMRAEG----VCCNEFALPVVLKCVPDARLGA-----QVHAMAMATG 130

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIF-EQMIQKNVVSMNGLMEGRRK----------- 274
             SD++V +ALV+ +   G    AR++F E   ++N VS NGLM    K           
Sbjct: 131 FGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVF 190

Query: 275 ------------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
                                         G++VH  ++R G    V   N LV+MY K 
Sbjct: 191 GEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKM 250

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G +D +  +F  M   D VSWN +ISG   NG    AI     M+  GL+ + F+L S L
Sbjct: 251 GRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSIL 310

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +C+  G   LG+QIHG  +K   DSD  +   L+ +YA   +L    KVF  M   D +
Sbjct: 311 KACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLI 370

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
             N++I   +       EA+  + ++R+ G   N  T   +L + +S        QVHA 
Sbjct: 371 LCNALISGCSHG-GRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHAL 429

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
            +K     +  + N L+  Y KC  + D  ++F   S   D ++  SMI+     +    
Sbjct: 430 AVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSG-DIIACTSMITALSQCDHGEG 488

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
           A+ L   M+++G   D F  +++L+ACAS++  E+G +VHA  ++     D   G+ALV 
Sbjct: 489 AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVY 548

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
            Y+KCG I+ A   F  +P R V SW++MI G A+HGHG +AL LF +M  +G  P+H+T
Sbjct: 549 TYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHIT 608

Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
              VL AC+HAGLVDE  ++F SM +++G+    E +SCM+DLLGRAG+LD   E +N M
Sbjct: 609 MTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSM 668

Query: 725 PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
           P   N+ IW  +LGA  R + +  ELG+ AA  LF +EP+ +  +VLLAN YAS G W +
Sbjct: 669 PFQANASIWGALLGA-SRVH-KDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNE 726

Query: 785 VAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGY 844
           VAK RK MK++ +KKE   SW+ +KD VH F+ GD+SHP    IY KL EL   M  AG+
Sbjct: 727 VAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGF 786

Query: 845 VPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKF 903
           VP     L DL+   KE L+S+HSE++AVAF +L+     PIR+ KNLR+C DCH AFKF
Sbjct: 787 VPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKF 846

Query: 904 ISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           ISKIV REI++RD NRFHHF DG CSCGDYW
Sbjct: 847 ISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  269 bits (687), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 196/679 (28%), Positives = 322/679 (47%), Gaps = 66/679 (9%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N LI+ Y +      A ++FDE+PD   VSW+ +V+ Y++ G+   A + F  M   G  
Sbjct: 41  NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
            N +AL  VL+    C P   + G QVH + + +    D  V+N L+AMYG      D A
Sbjct: 101 CNEFALPVVLK----CVPDA-RLGAQVHAMAMATGFGSDVFVANALVAMYGG-FGFMDDA 154

Query: 144 RRIFEEIET-RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           RR+F E ++ R+ +SWN ++S Y +        ++F  M   G    ++P E+ F  ++ 
Sbjct: 155 RRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG----IQPTEFGFSCVVN 210

Query: 203 AAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
           A   S  + +G    +Q+ AMV + G   D++  +ALV  + ++G    A  IFE+M   
Sbjct: 211 ACTGSRNIEAG----RQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDS 266

Query: 261 NVVSMNGLMEG-------RRK----------------------------------GKEVH 279
           +VVS N L+ G        R                                   G+++H
Sbjct: 267 DVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIH 326

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
           G++I++       +G GLV+MYAK   +DD+R VF +M  +D +  N +ISG    G ++
Sbjct: 327 GFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHD 386

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           EA+  F  +R++GL  +  +L + L S ASL      +Q+H   +K+G   D  V N L+
Sbjct: 387 EALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLI 446

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
             Y     LS   +VF      D ++  S+I A +  +     A+K +++M R G  P+ 
Sbjct: 447 DSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDH-GEGAIKLFMEMLRKGLEPDP 505

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
               ++L A +S S  + G QVHA +IK    ++    NAL+  Y KCG ++D E  F+ 
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 565

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           + E R  VSW++MI G   +    +A+ L   M+  G   +H T  +VL AC     ++ 
Sbjct: 566 LPE-RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 624

Query: 580 GMEVHACGVRACLEFDVVIG--SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISG 636
               +   ++     D      S ++D+  + G++D A    + MP + N   W +++  
Sbjct: 625 AKR-YFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLG- 682

Query: 637 YARHGHGDKALTLFSQMKL 655
            A   H D  L   +  KL
Sbjct: 683 -ASRVHKDPELGKLAAEKL 700



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 211/444 (47%), Gaps = 26/444 (5%)

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
           M S  ++   L+  A+   ++ G  +H   LK G  S  S  N L+S Y+         +
Sbjct: 1   MRSAGTISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARR 58

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           VF  +P+   VSW+S++ A++++  L   A++ +  MR  G   N      +L       
Sbjct: 59  VFDEIPDPCHVSWSSLVTAYSNN-GLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD-- 115

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
             +LG QVHA  +     ++  + NAL++ YG  G MDD  ++F      R+ VSWN ++
Sbjct: 116 -ARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLM 174

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
           S Y+ N+    A+ +   M+  G +   F F+ V++AC     +E G +VHA  VR   +
Sbjct: 175 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYD 234

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
            DV   +ALVDMY K GR+D AS  F+ MP  +V SWN++ISG   +GH  +A+ L  QM
Sbjct: 235 KDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS------CMVDL 707
           K  G +P+  T   +L ACS AG  D G        Q++G + +    S       +VD+
Sbjct: 295 KYSGLVPNVFTLSSILKACSGAGAFDLG-------RQIHGFMIKANADSDDYIGVGLVDM 347

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN-A 766
             +   LD   +  + M      LI    L + C    R  E    A ++ +E+  +   
Sbjct: 348 YAKNHFLDDARKVFDWM--FHRDLILCNALISGCSHGGRHDE----ALSLFYELRKEGLG 401

Query: 767 VNYVLLANMYASGGKWEDVAKARK 790
           VN   LA +  S    E  +  R+
Sbjct: 402 VNRTTLAAVLKSTASLEAASTTRQ 425



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 221/468 (47%), Gaps = 52/468 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +++ G+  DVF  N L+++Y+++G +  AS +F++MPD + VSW  ++SG    G  
Sbjct: 225 HAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHD 284

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           + A ++  +M  +G + N + L S+L+AC   G   F  G Q+H  ++K+N   D  +  
Sbjct: 285 HRAIELLLQMKYSGLVPNVFTLSSILKACS--GAGAFDLGRQIHGFMIKANADSDDYIGV 342

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY       D AR++F+ +  RDLI  N++IS  S  G       LF  +++EG  
Sbjct: 343 GLVDMYAKN-HFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEG-- 399

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             L  N  T  +++ +  S  L  +   +Q+ A+  K G + D +V + L+  + +    
Sbjct: 400 --LGVNRTTLAAVLKSTAS--LEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCL 455

Query: 248 YYARKIFEQMIQKNVVSMNGL-----------------MEGRRK---------------- 274
             A ++FE+    ++++   +                 ME  RK                
Sbjct: 456 SDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNAC 515

Query: 275 --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                   GK+VH +LI+         GN LV  YAKCG+I+D+   F  +  +  VSW+
Sbjct: 516 ASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWS 575

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            MI GL Q+G  + A+  F  M  +G+  ++ ++ S L +C   G +   ++      ++
Sbjct: 576 AMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEM 635

Query: 387 -GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
            G+D      + ++ L   AG L   +++   MP     S W +++GA
Sbjct: 636 FGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGA 683



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 45/99 (45%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K  F  D F  N L+  Y + G +  A   F  +P+R  VSW+ ++ G 
Sbjct: 522 EQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGL 581

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G    A ++F  MV  G   N   + SVL AC   G
Sbjct: 582 AQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 620


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 333/871 (38%), Positives = 469/871 (53%), Gaps = 59/871 (6%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G  +H  +LKS         N LI+ Y  C     CARR F+EI     +SW+S+++ YS
Sbjct: 23  GAHLHASLLKSGSL--ASFRNHLISFYSKCRRPC-CARRFFDEIPDPCHVSWSSLVTAYS 79

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
             G   S  + F  M+ EG    +  NE+    ++     + L       Q+ AM    G
Sbjct: 80  NNGLPRSAIQAFHGMRAEG----VCCNEFALPVVLKCVPDARLGA-----QVHAMAMATG 130

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIF-EQMIQKNVVSMNGLMEGRRK----------- 274
             SD++V +ALV+ +   G    AR++F E   ++N VS NGLM    K           
Sbjct: 131 FGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVF 190

Query: 275 ------------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
                                         G++VH  ++R G    V   N LV+MY K 
Sbjct: 191 GEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKM 250

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G +D +  +F  M   D VSWN +ISG   NG    AI     M+  GL+ + F+L S L
Sbjct: 251 GRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSIL 310

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +C+  G   LG+QIHG  +K   DSD  +   L+ +YA   +L    KVF  M   D +
Sbjct: 311 KACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLI 370

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
             N++I   +       EA+  + ++R+ G   N  T   +L + +S        QVHA 
Sbjct: 371 LCNALISGCSHG-GRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHAL 429

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
            +K     +  + N L+  Y KC  + D  ++F   S   D ++  SMI+     +    
Sbjct: 430 AVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSG-DIIACTSMITALSQCDHGEG 488

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
           A+ L   M+++G   D F  +++L+ACAS++  E+G +VHA  ++     D   G+ALV 
Sbjct: 489 AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVY 548

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
            Y+KCG I+ A   F  +P R V SW++MI G A+HGHG +AL LF +M  +G  P+H+T
Sbjct: 549 TYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHIT 608

Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
              VL AC+HAGLVDE  ++F SM +++G+    E +SCM+DLLGRAG+LD   E +N M
Sbjct: 609 MTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSM 668

Query: 725 PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
           P   N+ IW  +LGA  R + +  ELG+ AA  LF +EP+ +  +VLLAN YAS G W +
Sbjct: 669 PFQANASIWGALLGA-SRVH-KDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNE 726

Query: 785 VAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGY 844
           VAK RK MK++ +KKE   SW+ +KD VH F+ GD+SHP    IY KL EL   M  AG+
Sbjct: 727 VAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGF 786

Query: 845 VPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKF 903
           VP     L DL+   KE L+S+HSE++AVAF +L+     PIR+ KNLR+C DCH AFKF
Sbjct: 787 VPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKF 846

Query: 904 ISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           ISKIV REI++RD NRFHHF DG CSCGDYW
Sbjct: 847 ISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  268 bits (686), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 196/679 (28%), Positives = 321/679 (47%), Gaps = 66/679 (9%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N LI+ Y +      A + FDE+PD   VSW+ +V+ Y++ G+   A + F  M   G  
Sbjct: 41  NHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
            N +AL  VL+    C P   + G QVH + + +    D  V+N L+AMYG      D A
Sbjct: 101 CNEFALPVVLK----CVPDA-RLGAQVHAMAMATGFGSDVFVANALVAMYGG-FGFMDDA 154

Query: 144 RRIFEEIET-RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           RR+F E ++ R+ +SWN ++S Y +        ++F  M   G    ++P E+ F  ++ 
Sbjct: 155 RRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG----IQPTEFGFSCVVN 210

Query: 203 AAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
           A   S  + +G    +Q+ AMV + G   D++  +ALV  + ++G    A  IFE+M   
Sbjct: 211 ACTGSRNIEAG----RQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDS 266

Query: 261 NVVSMNGLMEG-------RRK----------------------------------GKEVH 279
           +VVS N L+ G        R                                   G+++H
Sbjct: 267 DVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIH 326

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
           G++I++       +G GLV+MYAK   +DD+R VF +M  +D +  N +ISG    G ++
Sbjct: 327 GFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHD 386

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           EA+  F  +R++GL  +  +L + L S ASL      +Q+H   +K+G   D  V N L+
Sbjct: 387 EALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLI 446

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
             Y     LS   +VF      D ++  S+I A +  +     A+K +++M R G  P+ 
Sbjct: 447 DSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDH-GEGAIKLFMEMLRKGLEPDP 505

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
               ++L A +S S  + G QVHA +IK    ++    NAL+  Y KCG ++D E  F+ 
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 565

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           + E R  VSW++MI G   +    +A+ L   M+  G   +H T  +VL AC     ++ 
Sbjct: 566 LPE-RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 624

Query: 580 GMEVHACGVRACLEFDVVIG--SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISG 636
               +   ++     D      S ++D+  + G++D A    + MP + N   W +++  
Sbjct: 625 AKR-YFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLG- 682

Query: 637 YARHGHGDKALTLFSQMKL 655
            A   H D  L   +  KL
Sbjct: 683 -ASRVHKDPELGKLAAEKL 700



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 210/444 (47%), Gaps = 26/444 (5%)

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
           M S  ++   L+  A+   ++ G  +H   LK G  S  S  N L+S Y+         +
Sbjct: 1   MRSAGTISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARR 58

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
            F  +P+   VSW+S++ A++++  L   A++ +  MR  G   N      +L       
Sbjct: 59  FFDEIPDPCHVSWSSLVTAYSNN-GLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD-- 115

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
             +LG QVHA  +     ++  + NAL++ YG  G MDD  ++F      R+ VSWN ++
Sbjct: 116 -ARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLM 174

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
           S Y+ N+    A+ +   M+  G +   F F+ V++AC     +E G +VHA  VR   +
Sbjct: 175 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYD 234

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
            DV   +ALVDMY K GR+D AS  F+ MP  +V SWN++ISG   +GH  +A+ L  QM
Sbjct: 235 KDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS------CMVDL 707
           K  G +P+  T   +L ACS AG  D G        Q++G + +    S       +VD+
Sbjct: 295 KYSGLVPNVFTLSSILKACSGAGAFDLG-------RQIHGFMIKANADSDDYIGVGLVDM 347

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN-A 766
             +   LD   +  + M      LI    L + C    R  E    A ++ +E+  +   
Sbjct: 348 YAKNHFLDDARKVFDWM--FHRDLILCNALISGCSHGGRHDE----ALSLFYELRKEGLG 401

Query: 767 VNYVLLANMYASGGKWEDVAKARK 790
           VN   LA +  S    E  +  R+
Sbjct: 402 VNRTTLAAVLKSTASLEAASTTRQ 425



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 221/468 (47%), Gaps = 52/468 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +++ G+  DVF  N L+++Y+++G +  AS +F++MPD + VSW  ++SG    G  
Sbjct: 225 HAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHD 284

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           + A ++  +M  +G + N + L S+L+AC   G   F  G Q+H  ++K+N   D  +  
Sbjct: 285 HRAIELLLQMKYSGLVPNVFTLSSILKACS--GAGAFDLGRQIHGFMIKANADSDDYIGV 342

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY       D AR++F+ +  RDLI  N++IS  S  G       LF  +++EG  
Sbjct: 343 GLVDMYAKN-HFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEG-- 399

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             L  N  T  +++ +  S  L  +   +Q+ A+  K G + D +V + L+  + +    
Sbjct: 400 --LGVNRTTLAAVLKSTAS--LEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCL 455

Query: 248 YYARKIFEQMIQKNVVSMNGL-----------------MEGRRK---------------- 274
             A ++FE+    ++++   +                 ME  RK                
Sbjct: 456 SDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNAC 515

Query: 275 --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                   GK+VH +LI+         GN LV  YAKCG+I+D+   F  +  +  VSW+
Sbjct: 516 ASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWS 575

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            MI GL Q+G  + A+  F  M  +G+  ++ ++ S L +C   G +   ++      ++
Sbjct: 576 AMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEM 635

Query: 387 -GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
            G+D      + ++ L   AG L   +++   MP     S W +++GA
Sbjct: 636 FGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGA 683



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 45/99 (45%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K  F  D F  N L+  Y + G +  A   F  +P+R  VSW+ ++ G 
Sbjct: 522 EQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGL 581

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G    A ++F  MV  G   N   + SVL AC   G
Sbjct: 582 AQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 620


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 336/957 (35%), Positives = 521/957 (54%), Gaps = 52/957 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H +IL      + FL N LI++Y + G L  A ++FD+MP+R+ VSW  I++ Y   
Sbjct: 66  KCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQS 125

Query: 65  GMS-----NEACKMFKEMVRAGFLLNRYALGSVLRACQE----CGPSGFKFGMQVHCLVL 115
                    EA  +F+ + +     +R  L  +L+ C      C    F      H    
Sbjct: 126 SEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESF------HGYAC 179

Query: 116 KSNQTFDGLVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTI 172
           K     D  V+  L+ +Y   G   E     R +FEE+  RD++ WN ++  Y + G   
Sbjct: 180 KIGLDGDDFVAGALVNIYLKFGKVKE----GRVLFEEMPYRDVVLWNLMLKAYLEMGFKE 235

Query: 173 SVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLY 232
               L S     G    L PNE T   L   +     +G     +       A  +S++ 
Sbjct: 236 EAIDLSSAFHTSG----LHPNEITLRLLSRISGDDSEAGQV---KSFENGNDASAVSEII 288

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKN----------VVSMNGLMEGRRKGKEVHGYL 282
             + ++SG+   G +    K F  M++ +          V++    ++    G++VH   
Sbjct: 289 SRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMA 348

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
           ++ GL  M+ V N L+NMY K   I  +R+VF  M  +D +SWN++I+G+ Q+    EA+
Sbjct: 349 LKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAV 408

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLG-WIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
             F  + R GL   ++++ S L + +SL   + L +QIH   +K    +D  VS AL+  
Sbjct: 409 CLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDA 468

Query: 402 YADAGYLSRCLK---VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           Y+     +RC+K   V F     D V+WN+++  +  S     + ++ +  M + G   +
Sbjct: 469 YSR----NRCMKEAEVLFGRNNFDLVAWNAMMSGYTQSHD-GHKTLELFALMHKQGERSD 523

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
             T   +L           G QVHA  IK     +  + + +L  Y KCG+M   +  F 
Sbjct: 524 DFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFD 583

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
            +    D+V+W ++ISG I N    +A+++   M   G   D FT AT+  A + +  LE
Sbjct: 584 SIP-VPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALE 642

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
           +G ++HA  ++     D  +G++LVDMY+KCG ID A   F  + + N+ +WN+M+ G A
Sbjct: 643 QGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLA 702

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
           +HG G +AL LF QM+  G  PD VTF+GVLSACSH+GLV E +K+ +SM + YG+ P++
Sbjct: 703 QHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEI 762

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
           E +SC+ D LGRAG + + E  I+ M +  ++ ++RT+L AC       TE G++ A  L
Sbjct: 763 EHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQG--DTETGKRVATKL 820

Query: 759 FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
            E+EP ++  YVLL+NMYA+  KW+++  AR  MK  +VKK+ G SW+ +K+ +H+FV  
Sbjct: 821 LELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVD 880

Query: 819 DESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VL 877
           D S+P+ +LIY+K+K++ + ++  GYVP+T F L D+E E KE  + YHSEK+AVAF +L
Sbjct: 881 DRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLL 940

Query: 878 TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +     PIR++KNLRVCGDCH+A K+ISK+  REIVLRD+NRFH F DG CSCGDYW
Sbjct: 941 STPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 119/303 (39%), Gaps = 37/303 (12%)

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
           +MLG+  H   L L  + +  + N L+S+Y+  G L+   +VF  MPE D VSWNS++ A
Sbjct: 62  LMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAA 121

Query: 433 FADSEALVSEAVK----YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
           +A S   V E VK     +  +R+     + +T   +L               H    K 
Sbjct: 122 YAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKI 181

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNL 548
            +  +  +  AL++ Y K G++ +   +F  M   RD V WN M+  Y+      +A++L
Sbjct: 182 GLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMP-YRDVVLWNLMLKAYLEMGFKEEAIDL 240

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
                                              H  G+    E  + + S +    S+
Sbjct: 241 -------------------------------SSAFHTSGLHPN-EITLRLLSRISGDDSE 268

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
            G++       D   V  + S N ++SGY   G     L  F  M       D VTF+ V
Sbjct: 269 AGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILV 328

Query: 669 LSA 671
           L+ 
Sbjct: 329 LAT 331



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 2/112 (1%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H   LK     D F+  +L+++Y + G +  A  LF  +   N  +W  ++ G 
Sbjct: 642 EQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL 701

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKFGMQVH 111
              G   EA ++FK+M   G   ++     VL AC   G     +K+   +H
Sbjct: 702 AQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMH 753


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 328/954 (34%), Positives = 512/954 (53%), Gaps = 102/954 (10%)

Query: 26  LINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLN 85
           LI+ Y+  GDL  A  +FDEMP R+   W  I + +  + +      +F+ M+      +
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFD 162

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY--GSCLESTDCA 143
                 VLR C     S F+F  Q+H   + S       + N LI +Y     L S   A
Sbjct: 163 ERIFAVVLRGCSGNAVS-FRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSS---A 218

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           +++FE ++ RD +SW ++IS  SQ G       LF ++         K   + FG     
Sbjct: 219 KKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSA---CTKVEFFEFG----- 270

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
                       +Q+  +V K G  S+ YV +ALV+ ++R GN   A +IF  M Q++ V
Sbjct: 271 ------------KQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRV 318

Query: 264 SMNGLMEGRRK-----------------------------------------GKEVHGYL 282
           S N L+ G  +                                         GK+ H Y 
Sbjct: 319 SYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYA 378

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
           I++G+   + V   L+++Y KC  I  +   F      D+++ +  I             
Sbjct: 379 IKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQI------------- 425

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
             F  M+ +G++ + F+  S L +C +LG   LG+QIH + LK G   +V VS+ L+ +Y
Sbjct: 426 --FTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMY 483

Query: 403 ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
           A  G L   LK+F  + E+D VSW ++I  +   +   +EA+  + +M+  G   + + F
Sbjct: 484 AKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKF-TEALNLFKEMQDQGIKSDNIGF 542

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
            + ++A +       G Q+HAQ      +++ +I NAL+S Y +CG++ +    F ++  
Sbjct: 543 ASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYA 602

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
           + D VSWNS++SG+  +    +A+N+   M + G  ++ FTF + +SA A++A +  G +
Sbjct: 603 K-DNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQ 661

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
           +H    +   + +  + +AL+ +Y+KCG ID      D+       SWNSMI+GY++HG 
Sbjct: 662 IHGMIRKTGYDSETEVSNALITLYAKCGTID------DI-------SWNSMITGYSQHGC 708

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
           G +AL LF  MK    LP+HVTFVGVLSACSH GLVDEG  +F+SMS+ + L+P+ E ++
Sbjct: 709 GFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYA 768

Query: 703 CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT-ELGRKAANMLFEM 761
           C+VDLLGR+G L + + F+ +MPI P++++WRT+L AC   N  K  ++G  AA+ L E+
Sbjct: 769 CVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSAC---NVHKNIDIGEFAASHLLEL 825

Query: 762 EPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDES 821
           EP+++  YVL++NMYA  GKW+   + R+ MK+  VKKE G SWV + + VH F AGD++
Sbjct: 826 EPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQN 885

Query: 822 HPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRN 880
           HP  D+IYE L+ L+ +  + GYVP+    L D E   K+     HSE++A+AF +L+  
Sbjct: 886 HPRADMIYEYLRGLDFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLT 945

Query: 881 SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           S  P+ + KNLRVC DCH+  K +SKI  R I++RDS RFHHF  G CSC DYW
Sbjct: 946 SSTPLYVFKNLRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999



 Score =  285 bits (729), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 201/671 (29%), Positives = 330/671 (49%), Gaps = 78/671 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H + +  GF    F+CN LI++Y + G L+SA K+F+ +  R+SVSW  ++SG +  G  
Sbjct: 187 HAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYE 246

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA  +F ++              VL AC +     F+FG Q+H LVLK   + +  V N
Sbjct: 247 EEAMLLFCQI--------------VLSACTKV--EFFEFGKQLHGLVLKQGFSSETYVCN 290

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ +Y     +   A +IF  +  RD +S+NS+IS  +Q+G       LF +M  +   
Sbjct: 291 ALVTLYSRS-GNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLD--- 346

Query: 188 YSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS------ 239
              KP+  T  SL++A  S  ++ +G    +Q  +   KAG+ SD+ V  +L+       
Sbjct: 347 -CQKPDCVTVASLLSACASVGALPNG----KQFHSYAIKAGMTSDIVVEGSLLDLYVKCS 401

Query: 240 ----------GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------GKEVH 279
                      + +L N   + +IF QM  + +V          K          G+++H
Sbjct: 402 DIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIH 461

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
             ++++G    V V + L++MYAK G +D +  +FR +   D VSW  MI+G  Q+  + 
Sbjct: 462 TQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFT 521

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           EA+  F  M+  G+ S N    S +S+CA +  +  G+QIH +    G   D+S+ NAL+
Sbjct: 522 EALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALV 581

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
           SLYA  G +      F  +   D VSWNS++  FA S     EA+  +  M +AG   N 
Sbjct: 582 SLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQS-GYFEEALNIFAQMNKAGLEINS 640

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
            TF + ++AA++ +  ++G Q+H  + K    +ET + NAL++ Y KCG +DD       
Sbjct: 641 FTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDD------- 693

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
                  +SWNSMI+GY  +    +A+ L   M Q     +H TF  VLSAC+ V  ++ 
Sbjct: 694 -------ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDE 746

Query: 580 GMEVHACGVRACLEFDVVIG-----SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSM 633
           G+       R+  E   ++      + +VD+  + G +  A RF + MP++ +   W ++
Sbjct: 747 GISY----FRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTL 802

Query: 634 ISGYARHGHGD 644
           +S    H + D
Sbjct: 803 LSACNVHKNID 813



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 157/574 (27%), Positives = 277/574 (48%), Gaps = 80/574 (13%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  +LK GF+ + ++CN L+ +Y R G+L+SA ++F  M  R+ VS+  ++SG   
Sbjct: 270 GKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQ 329

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           +G  N A  +FK+M       +   + S+L AC   G      G Q H   +K+  T D 
Sbjct: 330 QGYINRALALFKKMNLDCQKPDCVTVASLLSACASVG--ALPNGKQFHSYAIKAGMTSDI 387

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +V   L+ +Y  C                 D+ + +     Y Q  +    F++F++MQ 
Sbjct: 388 VVEGSLLDLYVKC----------------SDIKTAHEFFLCYGQLDNLNKSFQIFTQMQI 431

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           EG    + PN++T+ S++     + L  + L +QI   V K G   ++YV S L+  +A+
Sbjct: 432 EG----IVPNQFTYPSILKTC--TTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAK 485

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRR------------------------------ 273
            G   +A KIF ++ + +VVS   ++ G                                
Sbjct: 486 HGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASA 545

Query: 274 -----------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                      +G+++H     SG  D +++GN LV++YA+CG + ++ + F  +  KD+
Sbjct: 546 ISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDN 605

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           VSWN+++SG  Q+G +EEA+  F  M + GL  ++F+  S +S+ A++  + +G+QIHG 
Sbjct: 606 VSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGM 665

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
             K G DS+  VSNAL++LYA  G +             D +SWNS+I  ++       E
Sbjct: 666 IRKTGYDSETEVSNALITLYAKCGTI-------------DDISWNSMITGYS-QHGCGFE 711

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALL 501
           A+K + DM++    PN VTF+ +L+A S   +   G      + + +N+  +      ++
Sbjct: 712 ALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVV 771

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
              G+ G +   ++    M  + D + W +++S 
Sbjct: 772 DLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSA 805



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 212/476 (44%), Gaps = 86/476 (18%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K FH   +K G   D+ +  +L+++YV+  D+ +A + F            C    Y 
Sbjct: 370 NGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF-----------LC----YG 414

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                N++ ++F +M   G + N++   S+L+ C   G +    G Q+H  VLK+   F+
Sbjct: 415 QLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGAT--DLGEQIHTQVLKTGFQFN 472

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             VS+VLI MY       D A +IF  ++  D++SW ++I+ Y+Q         LF  MQ
Sbjct: 473 VYVSSVLIDMYAK-HGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQ 531

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL---QQILAMVKKAGLLSDLYVGSALVS 239
            +G    +K +   F S I+A      +G   L   +QI A    +G   DL +G+ALVS
Sbjct: 532 DQG----IKSDNIGFASAISAC-----AGIQALDQGRQIHAQSCLSGYSDDLSIGNALVS 582

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------------------------- 271
            +AR G    A   F+Q+  K+ VS N L+ G                            
Sbjct: 583 LYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFT 642

Query: 272 -------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                         R GK++HG + ++G      V N L+ +YAKCGTIDD         
Sbjct: 643 FGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDD--------- 693

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-Q 377
               +SWN+MI+G  Q+GC  EA+  F  M++  ++ ++ + +  LS+C+ +G +  G  
Sbjct: 694 ----ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGIS 749

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                     L         ++ L   +G LSR  +    MP + D + W +++ A
Sbjct: 750 YFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSA 805



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 43/177 (24%)

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
            + E+ +E+  N+   GY+H             M Q G R +  TF  +L  C +  +  
Sbjct: 51  EIPEKENEMDGNASGIGYLH------------LMEQHGVRANSQTFLWLLEGCLNSRSFY 98

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
            G++                   L+D Y   G ++ A   FD MP+R++  WN + + + 
Sbjct: 99  DGLK-------------------LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFI 139

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS------------HAGLVDEGFK 683
                 +   LF +M       D   F  VL  CS            HA  +  GF+
Sbjct: 140 AERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFE 196


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 331/879 (37%), Positives = 486/879 (55%), Gaps = 70/879 (7%)

Query: 107 GMQVHCLVLKSNQTFDGLV---SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS 163
           G  +H  +LKS     GL+   SN L+ +Y  C      AR +F+EI     +SW+S+++
Sbjct: 23  GAHLHSHLLKS-----GLLAGFSNHLLTLYSRC-RLPSAARAVFDEIPDPCHVSWSSLVT 76

Query: 164 VYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVK 223
            YS  G        F  M+  G    +  NE+    ++  A   V  G+    Q+ A+  
Sbjct: 77  AYSNNGMPRDALLAFRAMRGRG----VPCNEFALPVVLKCA-PDVRFGA----QVHALAV 127

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI----QKNVVSMNGLME--------- 270
              L+ D++V +ALV+ +   G    AR++F++ +    ++N VS N ++          
Sbjct: 128 ATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSG 187

Query: 271 ------------GRRK--------------------GKEVHGYLIRSGLFDMVAVGNGLV 298
                       G R                     G++VHG ++R+G    V   N LV
Sbjct: 188 DAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALV 247

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
           +MY+K G I+ + +VF  M   D VSWN  ISG   +G    A+     M+  GL+ + F
Sbjct: 248 DMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVF 307

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           +L S L +CA  G   LG+QIHG  +K   D D  V+  L+ +YA  G+L    KVF  M
Sbjct: 308 TLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFM 367

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS--PNGVTFINILAAASSFSMGK 476
           P  D + WN++I      +    E +  +  MR+ G     N  T  ++L + +S     
Sbjct: 368 PRRDLILWNALISG-CSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAIC 426

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY 536
              QVHA   K  + +++ + N L+  Y KCG++D   K+F + S   D +S  +M++  
Sbjct: 427 HTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVF-KESRSDDIISSTTMMTAL 485

Query: 537 IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
              +    A+ L   M+++G   D F  +++L+AC S++  E+G +VHA  ++     DV
Sbjct: 486 SQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDV 545

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
             G+ALV  Y+KCG I+ A   F  +P R + SW++MI G A+HGHG +AL LF +M  +
Sbjct: 546 FAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDE 605

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
           G  P+H+T   VLSAC+HAGLVD+  K+F+SM + +G+    E ++CM+D+LGRAG+L+ 
Sbjct: 606 GVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLED 665

Query: 717 IEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMY 776
             E +N MP   N+ +W  +LGA  R + R  ELGR AA  LF +EP+ +  +VLLAN Y
Sbjct: 666 AMELVNNMPFQANAAVWGALLGA-SRVH-RDPELGRMAAEKLFTLEPEKSGTHVLLANTY 723

Query: 777 ASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELN 836
           AS G W+++AK RK MK++ VKKE   SWV +KD VH F+ GD+SHP    IY KL EL 
Sbjct: 724 ASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELG 783

Query: 837 QKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL-TRNSKLPIRIMKNLRVCG 895
             M  AGYVP  +  L D++   KE L+S+HSE++AVAF L +  S  PIR+ KNLR+C 
Sbjct: 784 DLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIRVKKNLRICR 843

Query: 896 DCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           DCH AFK+ISKIV REI++RD NRFHHF +G CSCGDYW
Sbjct: 844 DCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 237/813 (29%), Positives = 371/813 (45%), Gaps = 134/813 (16%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +LK G        N L+ +Y R    ++A  +FDE+PD   VSW+ +V+ Y++ GM
Sbjct: 26  LHSHLLKSGLLAG--FSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGM 83

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             +A   F+ M   G   N +AL  VL+    C P   +FG QVH L + +    D  V+
Sbjct: 84  PRDALLAFRAMRGRGVPCNEFALPVVLK----CAPD-VRFGAQVHALAVATRLVHDVFVA 138

Query: 127 NVLIAMYGSCLESTDCARRIFEEI----ETRDLISWNSIISVY---SQRGDTISVFKLFS 179
           N L+A+YG      D ARR+F+E       R+ +SWN++IS Y    Q GD I VF    
Sbjct: 139 NALVAVYGG-FGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVF---- 193

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ---QILAMVKKAGLLSDLYVGSA 236
              RE      +PNE+ F  ++ A      +GS  L+   Q+   V + G   D++  +A
Sbjct: 194 ---REMVWSGERPNEFGFSCVVNAC-----TGSRDLEAGRQVHGAVVRTGYEKDVFTANA 245

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-------RRK--------------- 274
           LV  +++LG+   A  +FE+M   +VVS N  + G        R                
Sbjct: 246 LVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPN 305

Query: 275 -------------------GKEVHGYLIRS-GLFD-MVAVGNGLVNMYAKCGTIDDSRSV 313
                              G+++HG+++++   FD  VAV  GLV+MYAK G +DD+R V
Sbjct: 306 VFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAV--GLVDMYAKHGFLDDARKV 363

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG--LMSSNFSLISTLSSCASLG 371
           F FM  +D + WN +ISG   +G + E +  F  MR++G  L  +  +L S L S AS  
Sbjct: 364 FDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSE 423

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
            I   +Q+H    K+GL SD  V N L+  Y   G L   +KVF      D +S  +++ 
Sbjct: 424 AICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMT 483

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA 491
           A +  +    +A+K ++ M R G  P+     ++L A +S S  + G QVHA +IK    
Sbjct: 484 ALSQCDH-GEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFT 542

Query: 492 NETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWF 551
           ++    NAL+  Y KCG ++D +  F+ + E R  VSW++MI G   +    +A++L   
Sbjct: 543 SDVFAGNALVYAYAKCGSIEDADMAFSGLPE-RGIVSWSAMIGGLAQHGHGKRALDLFHR 601

Query: 552 MMQRGQRLDHFTFATVLSACASVAT----------------LERGMEVHACGVRACLEFD 595
           M+  G   +H T  +VLSAC                     ++R  E +AC         
Sbjct: 602 MLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYAC--------- 652

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKALTLFSQMK 654
                 ++D+  + G+++ A    + MP + N   W +++   A   H D  L   +  K
Sbjct: 653 ------MIDILGRAGKLEDAMELVNNMPFQANAAVWGALLG--ASRVHRDPELGRMAAEK 704

Query: 655 LDGPLPDHV-TFVGVLSACSHAGLVDEGFKHFKSM-----------------SQVYGLIP 696
           L    P+   T V + +  + AG+ DE  K  K M                  +V+  I 
Sbjct: 705 LFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIV 764

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPN 729
             +      D+ G+  EL    + +NK    PN
Sbjct: 765 GDKSHPMTRDIYGKLAELG---DLMNKAGYVPN 794



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 45/99 (45%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K  F  DVF  N L+  Y + G +  A   F  +P+R  VSW+ ++ G 
Sbjct: 527 EQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGL 586

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G    A  +F  M+  G   N   L SVL AC   G
Sbjct: 587 AQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAG 625


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 337/954 (35%), Positives = 517/954 (54%), Gaps = 46/954 (4%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H +IL      + FL N LI++Y + G L  A ++FD+MPDR+ VSW  I++ Y   
Sbjct: 59  KCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQS 118

Query: 65  GMS-----NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQ-VHCLVLKSN 118
                    +A  +F+ + +     +R  L  +L+ C     SG+ +  +  H    K  
Sbjct: 119 SECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLH---SGYVWASESFHGYACKIG 175

Query: 119 QTFDGLVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVF 175
              D  V+  L+ +Y   G   E     + +FEE+  RD++ WN ++  Y + G      
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKE----GKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 231

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS 235
            L S     G    L PNE T   L   +     +G     +  A    A  +S++   +
Sbjct: 232 DLSSAFHSSG----LNPNEITLRLLARISGDDSDAGQV---KSFANGNDASSVSEIIFRN 284

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNV----VSMNGLMEGRRK------GKEVHGYLIRS 285
             +S +   G +    K F  M++ +V    V+   ++    K      G++VH   ++ 
Sbjct: 285 KGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKL 344

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
           GL  M+ V N L+NMY K      +R+VF  M  +D +SWN++I+G+ QNG   EA+  F
Sbjct: 345 GLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLG-WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
             + R GL    +++ S L + +SL   + L +Q+H   +K+   SD  VS AL+  Y+ 
Sbjct: 405 MQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR 464

Query: 405 AGYLSRCLK---VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
               +RC+K   + F     D V+WN+++  +  S     + +K +  M + G   +  T
Sbjct: 465 ----NRCMKEAEILFERHNFDLVAWNAMMAGYTQSHD-GHKTLKLFALMHKQGERSDDFT 519

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
              +            G QVHA  IK     +  + + +L  Y KCG+M   +  F  + 
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
              D+V+W +MISG I N    +A ++   M   G   D FT AT+  A + +  LE+G 
Sbjct: 580 -VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGR 638

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           ++HA  ++     D  +G++LVDMY+KCG ID A   F  + + N+ +WN+M+ G A+HG
Sbjct: 639 QIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHG 698

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
            G + L LF QMK  G  PD VTF+GVLSACSH+GLV E +KH +SM   YG+ P++E +
Sbjct: 699 EGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHY 758

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM 761
           SC+ D LGRAG + + E  I  M +  ++ ++RT+L AC       TE G++ A  L E+
Sbjct: 759 SCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQG--DTETGKRVATKLLEL 816

Query: 762 EPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDES 821
           EP ++  YVLL+NMYA+  KW+++  AR  MK  +VKK+ G SW+ +K+ +H+FV  D S
Sbjct: 817 EPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRS 876

Query: 822 HPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRN 880
           + + +LIY K+K++ + ++  GYVP+T F L D+E E KE  + YHSEK+AVAF +L+  
Sbjct: 877 NRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTP 936

Query: 881 SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
              PIR++KNLRVCGDCH+A K+I+K+  REIVLRD+NRFH F DG CSCGDYW
Sbjct: 937 PSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 5/180 (2%)

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
           +MLG+  H   L    + +  + N L+S+Y+  G L+   +VF  MP+ D VSWNS++ A
Sbjct: 55  LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114

Query: 433 FADSEALVSEAVK----YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
           +A S   V E ++     +  +R+     + +T   +L               H    K 
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNL 548
            +  +  +  AL++ Y K G++ + + +F  M   RD V WN M+  Y+      +A++L
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP-YRDVVLWNLMLKAYLEMGFKEEAIDL 233



 Score = 47.0 bits (110), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 43/99 (43%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H   LK     D F+  +L+++Y + G +  A  LF  +   N  +W  ++ G 
Sbjct: 635 EQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL 694

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   E  ++FK+M   G   ++     VL AC   G
Sbjct: 695 AQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSG 733


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 311/870 (35%), Positives = 497/870 (57%), Gaps = 55/870 (6%)

Query: 108 MQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQ 167
           M++H  ++K   + D  + N L+ +Y  C      AR++ +E    D++SW+S++S Y Q
Sbjct: 1   MELHAHLIKFGFSRDPSLRNHLVTLYSKC-RRFGYARKLVDESSELDVVSWSSLLSGYVQ 59

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
            G       +F+ M   G    +K NE+TF S++ A   S+     + +++  M    G 
Sbjct: 60  NGFVEEALLVFNEMCLLG----VKCNEFTFPSVLKAC--SMKRDLNMGRKVHGMAVVTGF 113

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN--------------------- 266
            SD +V + LV  +A+ G    +R++F  ++++NVVS N                     
Sbjct: 114 ESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKE 173

Query: 267 ---------------------GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
                                GL EG   G+++HG +++ GL       N LV+MY+K G
Sbjct: 174 MVRSGIMPNEFSISIILNACAGLQEGDL-GRKIHGLMLKMGLDLDQFSANALVDMYSKAG 232

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            I+ + +VF+ +   D VSWN +I+G   + C + A+M    M+  G   + F+L S L 
Sbjct: 233 EIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALK 292

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           +CA++G+  LG+Q+H   +K+   SD+  +  L+ +Y+    +    + +  MP+ D ++
Sbjct: 293 ACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIA 352

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           WN++I  ++     + +AV  +  M       N  T   +L + +S    K+  Q+H   
Sbjct: 353 WNALISGYSQCGDHL-DAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTIS 411

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
           IK  + ++  + N+LL  YGKC  +D+  KIF   +   D V++ SMI+ Y       +A
Sbjct: 412 IKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERT-WEDLVAYTSMITAYSQYGDGEEA 470

Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
           + L   M     + D F  +++L+ACA+++  E+G ++H   ++     D+   ++LV+M
Sbjct: 471 LKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNM 530

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
           Y+KCG I+ A R F  +P R + SW++MI GYA+HGHG +AL LF+QM  DG  P+H+T 
Sbjct: 531 YAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITL 590

Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
           V VL AC+HAGLV+EG ++F+ M  ++G+ P  E ++CM+DLLGR+G+L++  E +N +P
Sbjct: 591 VSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIP 650

Query: 726 ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDV 785
              +  +W  +LGA  R + +  ELG+KAA MLF++EP+ +  +VLLAN+YAS G WE+V
Sbjct: 651 FEADGFVWGALLGA-ARIH-KNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENV 708

Query: 786 AKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
           AK RK MK+++VKKE G SW+ +KD V+ F+ GD SH   D IY KL +L   +  AGY 
Sbjct: 709 AKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGYS 768

Query: 846 PQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFI 904
              +  + +++   KE L+ +HSEK+AVAF ++      PIR+ KNLR+C DCH+ FKF+
Sbjct: 769 SIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTFFKFV 828

Query: 905 SKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            KIV REI++RD NRFHHF DG CSCGDYW
Sbjct: 829 CKIVSREIIVRDINRFHHFKDGSCSCGDYW 858



 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 196/684 (28%), Positives = 326/684 (47%), Gaps = 71/684 (10%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  ++K GF+ D  L N L+ +Y +      A KL DE  + + VSW+ ++SGY   G 
Sbjct: 3   LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA  +F EM   G   N +   SVL+AC          G +VH + + +    DG V+
Sbjct: 63  VEEALLVFNEMCLLGVKCNEFTFPSVLKACSM--KRDLNMGRKVHGMAVVTGFESDGFVA 120

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+ MY  C    D +RR+F  I  R+++SWN++ S Y Q         LF  M R G 
Sbjct: 121 NTLVVMYAKC-GLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSG- 178

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              + PNE++  S+I  A + +  G  L ++I  ++ K GL  D +  +ALV  +++ G 
Sbjct: 179 ---IMPNEFSI-SIILNACAGLQEGD-LGRKIHGLMLKMGLDLDQFSANALVDMYSKAGE 233

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG----------------------------------- 271
              A  +F+ +   +VVS N ++ G                                   
Sbjct: 234 IEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKA 293

Query: 272 ------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                 +  G+++H  LI+      +    GLV+MY+KC  +DD+R  +  M  KD ++W
Sbjct: 294 CAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAW 353

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N +ISG  Q G + +A+  F  M  + +  +  +L + L S ASL  I + +QIH   +K
Sbjct: 354 NALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIK 413

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA---DSEALVSE 442
            G+ SD  V N+LL  Y    ++    K+F      D V++ S+I A++   D E    E
Sbjct: 414 SGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGE----E 469

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           A+K YL M+ A   P+     ++L A ++ S  + G Q+H   IK+    +    N+L++
Sbjct: 470 ALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVN 529

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            Y KCG ++D ++ F+ +   R  VSW++MI GY  +    +A+ L   M++ G   +H 
Sbjct: 530 MYAKCGSIEDADRAFSEIP-NRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHI 588

Query: 563 TFATVLSACASVATLERG------MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
           T  +VL AC     +  G      MEV   G++   E      + ++D+  + G+++ A 
Sbjct: 589 TLVSVLCACNHAGLVNEGKQYFEKMEV-MFGIKPTQEH----YACMIDLLGRSGKLNEAV 643

Query: 617 RFFDLMPVR-NVYSWNSMISGYAR 639
              + +P   + + W +++ G AR
Sbjct: 644 ELVNSIPFEADGFVWGALL-GAAR 666



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 150/329 (45%), Gaps = 20/329 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H   +K G   D ++ N+L++ Y +   +  ASK+F+E    + V++  +++ Y
Sbjct: 402 KVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAY 461

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G   EA K++ +M  A    + +   S+L AC     S ++ G Q+H   +K     
Sbjct: 462 SQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANL--SAYEQGKQLHVHAIKFGFMC 519

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D   SN L+ MY  C  S + A R F EI  R ++SW+++I  Y+Q G      +LF++M
Sbjct: 520 DIFASNSLVNMYAKC-GSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQM 578

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            R+G    + PN  T  S++ A   + L   G    +++  M    G+       + ++ 
Sbjct: 579 LRDG----VPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMF---GIKPTQEHYACMID 631

Query: 240 GFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG- 296
              R G    A ++   +  + +      L+   R  K +  G      LFD+    +G 
Sbjct: 632 LLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGT 691

Query: 297 ---LVNMYAKCGTIDDSRSVFRFMIGKDS 322
              L N+YA  G  ++   V +FM  KDS
Sbjct: 692 HVLLANIYASAGMWENVAKVRKFM--KDS 718


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 319/927 (34%), Positives = 514/927 (55%), Gaps = 61/927 (6%)

Query: 46  MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFK 105
           MP RN VSW  ++SG    G+  E  + F++M   G   + + + S++ AC   G S F+
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSG-SMFR 59

Query: 106 FGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY 165
            G+QVH  V KS    D  VS  ++ +YG       C+R++FEE+  R+++SW S++  Y
Sbjct: 60  EGVQVHGFVAKSGLLSDVYVSTAILHLYG-VYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118

Query: 166 SQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKA 225
           S +G+   V  ++  M+ EG    +  NE +   +I++    +L    L +QI+  V K+
Sbjct: 119 SDKGEPEEVIDIYKGMRGEG----VGCNENSMSLVISSC--GLLKDESLGRQIIGQVVKS 172

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN------------------- 266
           GL S L V ++L+S    +GN  YA  IF+QM +++ +S N                   
Sbjct: 173 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 232

Query: 267 ----------------------GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
                                 G ++ ++ G+ +HG +++ G   +V V N L+ MYA  
Sbjct: 233 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 292

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G   ++  VF+ M  KD +SWN++++    +G   +A+   C+M   G   +  +  S L
Sbjct: 293 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 352

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
           ++C +  +   G+ +HG  +  GL  +  + NAL+S+Y   G +S   +V   MP  D V
Sbjct: 353 AACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVV 412

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL---GHQV 481
           +WN++IG +A+ E    +A+  +  MR  G S N +T +++L+A      G L   G  +
Sbjct: 413 AWNALIGGYAEDED-PDKALAAFQTMRVEGVSSNYITVVSVLSAC--LLPGDLLERGKPL 469

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           HA ++     ++  ++N+L++ Y KCG++   + +F  + + R+ ++WN+M++   H+  
Sbjct: 470 HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL-DNRNIITWNAMLAANAHHGH 528

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             + + LV  M   G  LD F+F+  LSA A +A LE G ++H   V+   E D  I +A
Sbjct: 529 GEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNA 588

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
             DMYSKCG I    +       R++ SWN +IS   RHG+ ++    F +M   G  P 
Sbjct: 589 AADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPG 648

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
           HVTFV +L+ACSH GLVD+G  ++  +++ +GL P +E   C++DLLGR+G L + E FI
Sbjct: 649 HVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFI 708

Query: 722 NKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           +KMP+ PN L+WR++L +C    N  +   GRKAA  L ++EP++   YVL +NM+A+ G
Sbjct: 709 SKMPMKPNDLVWRSLLASCKIHGNLDR---GRKAAENLSKLEPEDDSVYVLSSNMFATTG 765

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
           +WEDV   RK M    +KK+  CSWV +KD V  F  GD +HP+   IY KL+++ + ++
Sbjct: 766 RWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIK 825

Query: 841 DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHS 899
           ++GYV  T  AL D + E KE  +  HSE++A+A+ L    +   +RI KNLR+C DCHS
Sbjct: 826 ESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHS 885

Query: 900 AFKFISKIVGREIVLRDSNRFHHFNDG 926
            +KF+S+++GR IVLRD  RFHHF  G
Sbjct: 886 VYKFVSRVIGRRIVLRDQYRFHHFERG 912



 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 201/708 (28%), Positives = 339/708 (47%), Gaps = 71/708 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  + K G   DV++   ++++Y   G ++ + K+F+EMPDRN VSW  ++ GY+ KG  
Sbjct: 65  HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEP 124

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            E   ++K M   G   N  ++  V+ +C          G Q+   V+KS       V N
Sbjct: 125 EEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE--SLGRQIIGQVVKSGLESKLAVEN 182

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI+M GS + + D A  IF+++  RD ISWNSI + Y+Q G     F++FS M+    R
Sbjct: 183 SLISMLGS-MGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR----R 237

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQ----ILAMVKKAGLLSDLYVGSALVSGFAR 243
           +  + N  T  +L+     SVL G    Q+    I  +V K G  S + V + L+  +A 
Sbjct: 238 FHDEVNSTTVSTLL-----SVL-GHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAG 291

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLM-----EGR-------------------------- 272
            G    A  +F+QM  K+++S N LM     +GR                          
Sbjct: 292 AGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSA 351

Query: 273 ----------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                      KG+ +HG ++ SGLF    +GN LV+MY K G + +SR V   M  +D 
Sbjct: 352 LAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDV 411

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM-LGQQIHG 381
           V+WN +I G  ++   ++A+  F  MR +G+ S+  +++S LS+C   G ++  G+ +H 
Sbjct: 412 VAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA 471

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             +  G +SD  V N+L+++YA  G LS    +F  +   + ++WN+++ A A       
Sbjct: 472 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH-HGHGE 530

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           E +K    MR  G S +  +F   L+AA+  ++ + G Q+H   +K    +++ I NA  
Sbjct: 531 EVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAA 590

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
             Y KCGE+ +  K+    S  R   SWN +IS    +    +       M++ G +  H
Sbjct: 591 DMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGH 649

Query: 562 FTFATVLSACASVATLERGMEVHAC-----GVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
            TF ++L+AC+    +++G+  +       G+   +E  + +    +D+  + GR+  A 
Sbjct: 650 VTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICV----IDLLGRSGRLAEAE 705

Query: 617 RFFDLMPVR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
            F   MP++ N   W S+++    HG+ D+       +    P  D V
Sbjct: 706 TFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSV 753



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 136/281 (48%), Gaps = 12/281 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  ++ H  ++  G  Y+  + N L+++Y ++G+++ + ++  +MP R+ V+W  ++ GY
Sbjct: 362 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 421

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                 ++A   F+ M   G   N   + SVL AC   G    + G  +H  ++ +    
Sbjct: 422 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL-LERGKPLHAYIVSAGFES 480

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V N LI MY  C + +  ++ +F  ++ R++I+WN++++  +  G    V KL S+M
Sbjct: 481 DEHVKNSLITMYAKCGDLSS-SQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 539

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           +   F  SL    ++ G L  AA  +VL      QQ+  +  K G   D ++ +A    +
Sbjct: 540 R--SFGVSLDQFSFSEG-LSAAAKLAVLEEG---QQLHGLAVKLGFEHDSFIFNAAADMY 593

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYL 282
           ++ G      K+    + +++ S N L+    +    HGY 
Sbjct: 594 SKCGEIGEVVKMLPPSVNRSLPSWNILISALGR----HGYF 630



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 7/200 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  I+  GF  D  + N+LI +Y + GDL+S+  LF+ + +RN ++W  +++   H
Sbjct: 466 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 525

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   E  K+  +M   G  L++++    L A  +      + G Q+H L +K     D 
Sbjct: 526 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV--LEEGQQLHGLAVKLGFEHDS 583

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            + N    MY  C E  +  + +   +  R L SWN +IS   + G    V   F  M  
Sbjct: 584 FIFNAAADMYSKCGEIGEVVKMLPPSV-NRSLPSWNILISALGRHGYFEEVCATFHEMLE 642

Query: 184 EGFRYSLKPNEYTFGSLITA 203
            G    +KP   TF SL+TA
Sbjct: 643 MG----IKPGHVTFVSLLTA 658



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 44/99 (44%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H   +K GF +D F+ N   ++Y + G++    K+     +R+  SW  ++S  
Sbjct: 565 EEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISAL 624

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   E C  F EM+  G         S+L AC   G
Sbjct: 625 GRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGG 663


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1047

 Score =  560 bits (1443), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 319/974 (32%), Positives = 514/974 (52%), Gaps = 54/974 (5%)

Query: 3    DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
            + +  H QILK GF  +  L   L++ Y+  GDL  A K+FDEMP+R   +W  ++    
Sbjct: 86   EGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELA 145

Query: 63   HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             + +S +   +F  MV      N      VL AC+  G   F    Q+H  ++       
Sbjct: 146  SRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARIIYQGLGKS 204

Query: 123  GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             +V N LI +Y S     D ARR+F+ +  +D  SW ++IS  S+    +   +LF  M 
Sbjct: 205  TIVCNPLIDLY-SRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDM- 262

Query: 183  REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
               +   + P  Y F S+++A     +    + +Q+  +V K G  SD YV +ALVS + 
Sbjct: 263  ---YVLGIMPTPYAFSSVLSACKK--IESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF 317

Query: 243  RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---------------------------- 274
             LG+   A  IF  M Q++ V+ N L+ G  +                            
Sbjct: 318  HLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLAS 377

Query: 275  -------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                         G+++H Y  + G      +   L+N+YAKC  I+ + + F     ++
Sbjct: 378  LVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVEN 437

Query: 322  SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
             V WN M+           +   F  M+ + ++ + ++  S L +C  LG + LG+QIH 
Sbjct: 438  VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHS 497

Query: 382  EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
            + +K     +  V + L+ +YA  G L     +       D VSW ++I  +        
Sbjct: 498  QIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN-FDD 556

Query: 442  EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
            +A+  +  M   G   + V   N ++A +     K G Q+HAQ      +++   +NAL+
Sbjct: 557  KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 616

Query: 502  SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
            + Y KCG +++    F + +E  D ++WN+++SG+  +    +A+ +   M + G   ++
Sbjct: 617  TLYSKCGNIEEAYLAFEQ-TEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNN 675

Query: 562  FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
            FTF + + A +  A +++G +VHA   +   + +  + +A++ MY+KCG I  A + F  
Sbjct: 676  FTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLE 735

Query: 622  MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
            + ++N  SWN+MI+ Y++HG G +AL  F QM      P+HVT VGVLSACSH GLVD+G
Sbjct: 736  LSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 795

Query: 682  FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACC 741
             ++F+SM+  YGL P+ E + C+VD+L RAG L + ++FI +MPI P++L+WRT+L AC 
Sbjct: 796  IEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACV 855

Query: 742  RANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA 801
                +  E+G  AA+ L E+EP+++  YVLL+N+YA   KW+     R+ MKE  VKKE 
Sbjct: 856  VH--KNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEP 913

Query: 802  GCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKE 861
            G SW+ +K+ +H F  GD++HP  D I+E  K+L ++  + GYV      L +L+ E K+
Sbjct: 914  GQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKD 973

Query: 862  DLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRF 920
              +  HSEK+A++F +L+  + +PI +MKNLRVC DCH   KF+SK+  REI++RD+ RF
Sbjct: 974  PTIFIHSEKLAISFGLLSLPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRF 1033

Query: 921  HHFNDGKCSCGDYW 934
            HHF  G CSC DYW
Sbjct: 1034 HHFEGGACSCKDYW 1047



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 105/202 (51%), Gaps = 7/202 (3%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K+ +  H Q    GF+ D+   N L+ +Y + G++  A   F++    ++++W  +VSG+
Sbjct: 591 KEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGF 650

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G + EA ++F  M R G   N +  GS ++A  E   +  K G QVH ++ K+    
Sbjct: 651 QQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASE--TANMKQGKQVHAVITKTGYDS 708

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V N +I+MY  C   +D A++ F E+  ++ +SWN++I+ YS+ G        F +M
Sbjct: 709 ETEVCNAIISMYAKCGSISD-AKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQM 767

Query: 182 QREGFRYSLKPNEYTFGSLITA 203
                  +++PN  T   +++A
Sbjct: 768 ----IHSNVRPNHVTLVGVLSA 785



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 2/192 (1%)

Query: 556 GQRLDHFTFATVLSACASV-ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
           G R +H T   +L  C     +L+ G ++H+  ++   + +  +   L+D Y   G +D 
Sbjct: 62  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
           A + FD MP R +++WN MI   A      K   LF +M  +   P+  TF GVL AC  
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG 181

Query: 675 AGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWR 734
             +  +  +   +     GL       + ++DL  R G +D+     + + +  +S  W 
Sbjct: 182 GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHS-SWV 240

Query: 735 TVLGACCRANCR 746
            ++    +  C 
Sbjct: 241 AMISGLSKNECE 252



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 51/99 (51%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  I K G+  +  +CN +I++Y + G ++ A K F E+  +N VSW  +++ Y
Sbjct: 692 KQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAY 751

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           +  G  +EA   F +M+ +    N   L  VL AC   G
Sbjct: 752 SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIG 790


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  560 bits (1443), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 334/897 (37%), Positives = 484/897 (53%), Gaps = 70/897 (7%)

Query: 81  GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST 140
           G LL RYA    L             G  +H  +LKS      +  N L++ Y  C    
Sbjct: 8   GPLLTRYAATQSLLQ-----------GAHIHAHLLKSG--LFAVFRNHLLSFYSKC-RLP 53

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
             ARR+F+EI     +SW+S+++ YS           F  M+      S++ NE+    +
Sbjct: 54  GSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRS----CSVRCNEFVLPVV 109

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQ 259
           +  A  +         Q+ A+    GL  D++V +ALV+ +   G    AR +F++   +
Sbjct: 110 LKCAPDAGFG-----TQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCE 164

Query: 260 KNVVSMNGLMEGRRK-----------------------------------------GKEV 278
           +N VS NGLM    K                                         G++V
Sbjct: 165 RNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKV 224

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H  +IR+G    V   N LV+MY+K G I  +  VF  +   D VSWN  ISG   +G  
Sbjct: 225 HAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHD 284

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           + A+     M+  GL+ + F+L S L +CA  G   LG+QIHG  +K   DSD  ++  L
Sbjct: 285 QHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGL 344

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           + +YA  G L    KVF  +P+ D V WN++I   +   A  +EA+  +  MR+ G+  N
Sbjct: 345 VDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHG-AQHAEALSLFCRMRKEGFDVN 403

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
             T   +L + +S        QVHA   K    +++ + N L+  Y KC  ++   ++F 
Sbjct: 404 RTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFE 463

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
           +     D +++ SMI+     +    A+ L   M+++G   D F  +++L+ACAS++  E
Sbjct: 464 KHGSY-DIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYE 522

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
           +G +VHA  ++     DV  G+ALV  Y+KCG I+ A   F  +P + V SW++MI G A
Sbjct: 523 QGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLA 582

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
           +HGHG +AL +F +M  +   P+H+T   VL AC+HAGLVDE  ++F SM +++G+    
Sbjct: 583 QHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTE 642

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
           E ++CM+DLLGRAG+LD   E +N MP   N+ +W  +L A  R + R  ELGR AA  L
Sbjct: 643 EHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAA-SRVH-RDPELGRLAAEKL 700

Query: 759 FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
           F +EP+ +  +VLLAN YAS G W+DVAK RK MK+++VKKE   SWV +KD VH F+ G
Sbjct: 701 FILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVG 760

Query: 819 DESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL- 877
           D+SHP    IY KL EL   M  AGYVP  +  L D++   KE L+S+HSE++AVAF L 
Sbjct: 761 DKSHPRARDIYAKLDELGDLMTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALI 820

Query: 878 TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +  +  PIR+ KNLR+C DCH+AFKFIS IV REI++RD NRFHHF DG CSC DYW
Sbjct: 821 STPAGAPIRVKKNLRICRDCHAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877



 Score =  268 bits (686), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 197/711 (27%), Positives = 332/711 (46%), Gaps = 98/711 (13%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +LK G  + VF  N L++ Y +     SA ++FDE+PD   VSW+ +V+ Y++  M
Sbjct: 26  IHAHLLKSGL-FAVFR-NHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAM 83

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             +A   F+ M       N + L  VL+   + G     FG Q+H L + +    D  V+
Sbjct: 84  PRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAG-----FGTQLHALAMATGLGGDIFVA 138

Query: 127 NVLIAMYGSCLESTDCARRIFEEIE-TRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           N L+AMYG      D AR +F+E    R+ +SWN ++S Y +        K+F  M   G
Sbjct: 139 NALVAMYGG-FGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGG 197

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ---QILAMVKKAGLLSDLYVGSALVSGFA 242
               ++PNE+ F  ++ A      +GS  L+   ++ AMV + G   D++  +ALV  ++
Sbjct: 198 ----VQPNEFGFSCVVNAC-----TGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYS 248

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG------------------------------- 271
           +LG+   A  +F ++ + +VVS N  + G                               
Sbjct: 249 KLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSS 308

Query: 272 ----------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                        G+++HG+++++       +  GLV+MYAK G +DD++ VF ++  +D
Sbjct: 309 ILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRD 368

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            V WN +ISG      + EA+  FC MR++G   +  +L + L S ASL  I   +Q+H 
Sbjct: 369 LVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHA 428

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
              KLG  SD  V N L+  Y     L+   +VF     +D +++ S+I A +  +    
Sbjct: 429 LAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDH-GE 487

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           +A+K +++M R G  P+     ++L A +S S  + G QVHA +IK    ++    NAL+
Sbjct: 488 DAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALV 547

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
             Y KCG ++D +  F+ + E +  VSW++MI G   +    +A+++   M+      +H
Sbjct: 548 YTYAKCGSIEDADLAFSGLPE-KGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNH 606

Query: 562 FTFATVLSACASVAT----------------LERGMEVHACGVRACLEFDVVIGSALVDM 605
            T  +VL AC                     +ER  E +AC               ++D+
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYAC---------------MIDL 651

Query: 606 YSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKALTLFSQMKL 655
             + G++D A    + MP + N   W ++++  A   H D  L   +  KL
Sbjct: 652 LGRAGKLDDAMELVNSMPFQTNAAVWGALLA--ASRVHRDPELGRLAAEKL 700



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 138/328 (42%), Gaps = 20/328 (6%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D +  H    K GF  D  + N LI+ Y +   L  A ++F++    + +++  +++  +
Sbjct: 422 DTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALS 481

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                 +A K+F EM+R G   + + L S+L AC     S ++ G QVH  ++K     D
Sbjct: 482 QCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASL--SAYEQGKQVHAHLIKRQFMSD 539

Query: 123 GLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
               N L+  Y  C  +E  D A   F  +  + ++SW+++I   +Q G       +F R
Sbjct: 540 VFAGNALVYTYAKCGSIEDADLA---FSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHR 596

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M  E     + PN  T  S++ A   + L      +   +M +  G+       + ++  
Sbjct: 597 MVDE----HISPNHITMTSVLCACNHAGLVDE-AKRYFNSMKEMFGIERTEEHYACMIDL 651

Query: 241 FARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG-- 296
             R G    A ++   M  Q N      L+   R  ++   G L    LF +    +G  
Sbjct: 652 LGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTH 711

Query: 297 --LVNMYAKCGTIDDSRSVFRFMIGKDS 322
             L N YA  G  DD   V + M  KDS
Sbjct: 712 VLLANTYASAGMWDDVAKVRKLM--KDS 737



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 44/99 (44%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K  F  DVF  N L+  Y + G +  A   F  +P++  VSW+ ++ G 
Sbjct: 522 EQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGL 581

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G    A  +F  MV      N   + SVL AC   G
Sbjct: 582 AQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAG 620


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 309/836 (36%), Positives = 479/836 (57%), Gaps = 58/836 (6%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           ++++F+E   + L   N ++  +S+         LF  ++R G      P + +  S + 
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSG-----SPTDGSSLSCVL 99

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
                 L    + +Q+     K G + D+ VG++LV  + +  +     ++F++M  KNV
Sbjct: 100 KV-CGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNV 158

Query: 263 VSMNGLMEGRR-----------------------------------------KGKEVHGY 281
           VS   L+ G R                                         KG +VH  
Sbjct: 159 VSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTM 218

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           +I+SGL   + VGN +VNMY+K   + D+++VF  M  +++VSWN+MI+G   NG   EA
Sbjct: 219 VIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEA 278

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
              F  MR +G+  +     + +  CA++  +   +Q+H + +K G D D+++  AL+  
Sbjct: 279 FELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVA 338

Query: 402 YADAGYLSRCLKVFFLMPE-HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           Y+    +    K+F +M    + VSW ++I  +  +      A+  +  MRR G  PN  
Sbjct: 339 YSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQN-GRTDRAMNLFCQMRREGVRPNHF 397

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           T+  IL A ++ S      Q+HA V+K N  N  ++  AL   Y K G+ ++  KIF  +
Sbjct: 398 TYSTILTANAAVSPS----QIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELI 453

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS-VATLER 579
            E+ D V+W++M+SGY     +  A+ +   + + G   + FTF++VL+ACA+  A++E+
Sbjct: 454 DEK-DIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQ 512

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G + H+C +++     + + SALV MY+K G I+ A+  F     R++ SWNSMISGYA+
Sbjct: 513 GKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQ 572

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
           HG G K+L +F +M+      D +TF+GV+SAC+HAGLV+EG ++F  M + Y ++P +E
Sbjct: 573 HGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTME 632

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            +SCMVDL  RAG L+K  + INKMP    + IWRT+L A CR +    +LG  AA  L 
Sbjct: 633 HYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAA-CRVHL-NVQLGELAAEKLI 690

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
            ++PQ++  YVLL+N+YA+ G W++ AK RK M   +VKKEAG SW+ +K+    F+AGD
Sbjct: 691 SLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGD 750

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLT 878
            SHP+ D IY KL+EL+ +++DAGY P TK+ L D+E E KE ++S HSE++A+AF ++ 
Sbjct: 751 LSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIA 810

Query: 879 RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
                PI+I+KNLRVCGDCH+  K ISKI GR+IV+RDSNRFHHF  G CSCGDYW
Sbjct: 811 TPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866



 Score =  246 bits (627), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 187/639 (29%), Positives = 315/639 (49%), Gaps = 79/639 (12%)

Query: 39  ASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQE 98
           + +LFDE P +       ++  ++    + EA  +F  + R+G   +  +L  VL+ C  
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVC-- 102

Query: 99  CGPSGFKF----GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRD 154
               G  F    G QVHC  +K     D  V   L+ MY    ES +   R+F+E+  ++
Sbjct: 103 ----GCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKT-ESVEDGERVFDEMRVKN 157

Query: 155 LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI--TAAYSSVLSGS 212
           ++SW S+++ Y Q G      KLFS+MQ EG    +KPN +TF +++   AA  +V  G 
Sbjct: 158 VVSWTSLLAGYRQNGLNEQALKLFSQMQLEG----IKPNPFTFAAVLGGLAADGAVEKGV 213

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG- 271
               Q+  MV K+GL S ++VG+++V+ +++      A+ +F+ M  +N VS N ++ G 
Sbjct: 214 ----QVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGF 269

Query: 272 ----------------RRKG------------------------KEVHGYLIRSGL-FDM 290
                           R +G                        K++H  +I++G  FD+
Sbjct: 270 VTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDL 329

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIG-KDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
             +   L+  Y+KC  IDD+  +F  M G ++ VSW  +ISG  QNG  + A+  FC MR
Sbjct: 330 -NIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMR 388

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
           R+G+  ++F+  + L++ A++       QIH   +K   ++  SV  AL   Y+  G  +
Sbjct: 389 REGVRPNHFTYSTILTANAAVS----PSQIHALVVKTNYENSPSVGTALSDSYSKIGDAN 444

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL-AA 468
              K+F L+ E D V+W++++  +A     +  AVK +L + + G  PN  TF ++L A 
Sbjct: 445 EAAKIFELIDEKDIVAWSAMLSGYAQM-GDIEGAVKIFLQLAKEGVEPNEFTFSSVLNAC 503

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
           A+  +  + G Q H+  IK   +N   + +AL++ Y K G ++   ++F R  + RD VS
Sbjct: 504 AAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVD-RDLVS 562

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           WNSMISGY  +    K++ +   M  +   LD  TF  V+SAC     +  G       V
Sbjct: 563 WNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMV 622

Query: 589 RACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMP 623
           +   ++ +V      S +VD+YS+ G ++ A    + MP
Sbjct: 623 K---DYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMP 658



 Score =  212 bits (540), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 146/572 (25%), Positives = 277/572 (48%), Gaps = 50/572 (8%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H Q +K GF  DV +  +L+++Y++   +    ++FDEM  +N VSW  +++GY  
Sbjct: 111 GKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQ 170

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G++ +A K+F +M   G   N +   +VL      G    + G+QVH +V+KS      
Sbjct: 171 NGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADG--AVEKGVQVHTMVIKSGLDSTI 228

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V N ++ MY   L  +D A+ +F+ +E R+ +SWNS+I+ +   G  +  F+LF RM+ 
Sbjct: 229 FVGNSMVNMYSKSLMVSD-AKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           EG    +K  +  F ++I    +  +      +Q+   V K G   DL + +AL+  +++
Sbjct: 288 EG----VKLTQTIFATVIKLCAN--IKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341

Query: 244 LGNFYYARKIFEQMIQ-KNVVSMNGLMEG-----------------RRKG---------- 275
                 A K+F  M   +NVVS   ++ G                 RR+G          
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYST 401

Query: 276 ----------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                      ++H  ++++   +  +VG  L + Y+K G  +++  +F  +  KD V+W
Sbjct: 402 ILTANAAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAW 461

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS-LGWIMLGQQIHGEGL 384
           + M+SG  Q G  E A+  F  + ++G+  + F+  S L++CA+    +  G+Q H   +
Sbjct: 462 SAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSI 521

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           K G  + + VS+AL+++YA  G +    +VF    + D VSWNS+I  +A       +++
Sbjct: 522 KSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYA-QHGCGKKSL 580

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSC 503
           K + +MR      +G+TFI +++A +   +   G +    ++K Y++       + ++  
Sbjct: 581 KIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDL 640

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           Y + G ++    +  +M        W ++++ 
Sbjct: 641 YSRAGMLEKAMDLINKMPFPAGATIWRTLLAA 672



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 53/99 (53%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K FH   +K GF+  + + + L+ +Y + G++ SA+++F    DR+ VSW  ++SGY
Sbjct: 511 EQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGY 570

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   ++ K+F+EM      L+      V+ AC   G
Sbjct: 571 AQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAG 609


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 320/974 (32%), Positives = 512/974 (52%), Gaps = 54/974 (5%)

Query: 3    DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
            + +  H QILK G   +  L   L + Y+  GDL  A K+FDEMP+R   +W  ++    
Sbjct: 63   EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELA 122

Query: 63   HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             + +  E   +F  MV      N      VL AC+  G   F    Q+H  +L       
Sbjct: 123  SRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDS 181

Query: 123  GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             +V N LI +Y S     D ARR+F+ +  +D  SW ++IS  S+        +LF  M 
Sbjct: 182  TVVCNPLIDLY-SRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM- 239

Query: 183  REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
               +   + P  Y F S+++A     +    + +Q+  +V K G  SD YV +ALVS + 
Sbjct: 240  ---YVLGIMPTPYAFSSVLSACKK--IESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF 294

Query: 243  RLGNFYYARKIFEQMIQKNVVSMNGLMEG--------------RR--------------- 273
             LGN   A  IF  M Q++ V+ N L+ G              +R               
Sbjct: 295  HLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLAS 354

Query: 274  ------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                        +G+++H Y  + G      +   L+N+YAKC  I+ +   F     ++
Sbjct: 355  LVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVEN 414

Query: 322  SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
             V WN M+           +   F  M+ + ++ + ++  S L +C  LG + LG+QIH 
Sbjct: 415  VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHS 474

Query: 382  EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
            + +K     +  V + L+ +YA  G L     +       D VSW ++I  +        
Sbjct: 475  QIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN-FDD 533

Query: 442  EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
            +A+  +  M   G   + V   N ++A +     K G Q+HAQ      +++   +NAL+
Sbjct: 534  KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 593

Query: 502  SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
            + Y +CG++++    F + +E  D ++WN+++SG+  +    +A+ +   M + G   ++
Sbjct: 594  TLYSRCGKIEESYLAFEQ-TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNN 652

Query: 562  FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
            FTF + + A +  A +++G +VHA   +   + +  + +AL+ MY+KCG I  A + F  
Sbjct: 653  FTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE 712

Query: 622  MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
            +  +N  SWN++I+ Y++HG G +AL  F QM      P+HVT VGVLSACSH GLVD+G
Sbjct: 713  VSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 772

Query: 682  FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACC 741
              +F+SM+  YGL P+ E + C+VD+L RAG L + +EFI +MPI P++L+WRT+L AC 
Sbjct: 773  IAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACV 832

Query: 742  RANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA 801
                +  E+G  AA+ L E+EP+++  YVLL+N+YA   KW+     R+ MKE  VKKE 
Sbjct: 833  VH--KNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEP 890

Query: 802  GCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKE 861
            G SW+ +K+ +H F  GD++HP  D I+E  ++L ++  + GYV      L +L+ E K+
Sbjct: 891  GQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKD 950

Query: 862  DLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRF 920
             ++  HSEK+A++F +L+  + +PI +MKNLRVC DCH+  KF+SK+  REI++RD+ RF
Sbjct: 951  PIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRF 1010

Query: 921  HHFNDGKCSCGDYW 934
            HHF  G CSC DYW
Sbjct: 1011 HHFEGGACSCKDYW 1024



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 25/246 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K+ +  H Q    GF+ D+   N L+ +Y R G +  +   F++    ++++W  +VSG+
Sbjct: 568 KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 627

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G + EA ++F  M R G   N +  GS ++A  E   +  K G QVH ++ K+    
Sbjct: 628 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASE--TANMKQGKQVHAVITKTGYDS 685

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V N LI+MY  C   +D A + F E+ T++ +SWN+II+ YS+ G        F +M
Sbjct: 686 ETEVCNALISMYAKCGSISD-AEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM 744

Query: 182 QREGFRYSLKPNEYTFGSLITA-----------AYSSVLSGSYLLQQ-------ILAMVK 223
                  +++PN  T   +++A           AY   ++  Y L         ++ M+ 
Sbjct: 745 ----IHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLT 800

Query: 224 KAGLLS 229
           +AGLLS
Sbjct: 801 RAGLLS 806



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 2/193 (1%)

Query: 555 RGQRLDHFTFATVLSACASV-ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID 613
           RG R +H T   +L  C     +L+ G ++H+  ++  L+ +  +   L D Y   G + 
Sbjct: 38  RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLY 97

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
            A + FD MP R +++WN MI   A      +   LF +M  +   P+  TF GVL AC 
Sbjct: 98  GAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR 157

Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
              +  +  +   +     GL       + ++DL  R G +D      + + +  +S  W
Sbjct: 158 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS-SW 216

Query: 734 RTVLGACCRANCR 746
             ++    +  C 
Sbjct: 217 VAMISGLSKNECE 229


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 320/974 (32%), Positives = 512/974 (52%), Gaps = 54/974 (5%)

Query: 3    DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
            + +  H QILK G   +  L   L + Y+  GDL  A K+FDEMP+R   +W  ++    
Sbjct: 103  EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELA 162

Query: 63   HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             + +  E   +F  MV      N      VL AC+  G   F    Q+H  +L       
Sbjct: 163  SRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR-GGSVAFDVVEQIHARILYQGLRDS 221

Query: 123  GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             +V N LI +Y S     D ARR+F+ +  +D  SW ++IS  S+        +LF  M 
Sbjct: 222  TVVCNPLIDLY-SRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM- 279

Query: 183  REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
               +   + P  Y F S+++A     +    + +Q+  +V K G  SD YV +ALVS + 
Sbjct: 280  ---YVLGIMPTPYAFSSVLSACKK--IESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF 334

Query: 243  RLGNFYYARKIFEQMIQKNVVSMNGLMEG--------------RR--------------- 273
             LGN   A  IF  M Q++ V+ N L+ G              +R               
Sbjct: 335  HLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLAS 394

Query: 274  ------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                        +G+++H Y  + G      +   L+N+YAKC  I+ +   F     ++
Sbjct: 395  LVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVEN 454

Query: 322  SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
             V WN M+           +   F  M+ + ++ + ++  S L +C  LG + LG+QIH 
Sbjct: 455  VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHS 514

Query: 382  EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
            + +K     +  V + L+ +YA  G L     +       D VSW ++I  +        
Sbjct: 515  QIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN-FDD 573

Query: 442  EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
            +A+  +  M   G   + V   N ++A +     K G Q+HAQ      +++   +NAL+
Sbjct: 574  KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 633

Query: 502  SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
            + Y +CG++++    F + +E  D ++WN+++SG+  +    +A+ +   M + G   ++
Sbjct: 634  TLYSRCGKIEESYLAFEQ-TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNN 692

Query: 562  FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
            FTF + + A +  A +++G +VHA   +   + +  + +AL+ MY+KCG I  A + F  
Sbjct: 693  FTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE 752

Query: 622  MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
            +  +N  SWN++I+ Y++HG G +AL  F QM      P+HVT VGVLSACSH GLVD+G
Sbjct: 753  VSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 812

Query: 682  FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACC 741
              +F+SM+  YGL P+ E + C+VD+L RAG L + +EFI +MPI P++L+WRT+L AC 
Sbjct: 813  IAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACV 872

Query: 742  RANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA 801
                +  E+G  AA+ L E+EP+++  YVLL+N+YA   KW+     R+ MKE  VKKE 
Sbjct: 873  VH--KNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEP 930

Query: 802  GCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKE 861
            G SW+ +K+ +H F  GD++HP  D I+E  ++L ++  + GYV      L +L+ E K+
Sbjct: 931  GQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKD 990

Query: 862  DLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRF 920
             ++  HSEK+A++F +L+  + +PI +MKNLRVC DCH+  KF+SK+  REI++RD+ RF
Sbjct: 991  PIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRF 1050

Query: 921  HHFNDGKCSCGDYW 934
            HHF  G CSC DYW
Sbjct: 1051 HHFEGGACSCKDYW 1064



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 25/246 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K+ +  H Q    GF+ D+   N L+ +Y R G +  +   F++    ++++W  +VSG+
Sbjct: 608 KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 667

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G + EA ++F  M R G   N +  GS ++A  E   +  K G QVH ++ K+    
Sbjct: 668 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET--ANMKQGKQVHAVITKTGYDS 725

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V N LI+MY  C   +D A + F E+ T++ +SWN+II+ YS+ G        F +M
Sbjct: 726 ETEVCNALISMYAKCGSISD-AEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM 784

Query: 182 QREGFRYSLKPNEYTFGSLITA-----------AYSSVLSGSYLLQQ-------ILAMVK 223
                  +++PN  T   +++A           AY   ++  Y L         ++ M+ 
Sbjct: 785 ----IHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLT 840

Query: 224 KAGLLS 229
           +AGLLS
Sbjct: 841 RAGLLS 846



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 2/193 (1%)

Query: 555 RGQRLDHFTFATVLSACASV-ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID 613
           RG R +H T   +L  C     +L+ G ++H+  ++  L+ +  +   L D Y   G + 
Sbjct: 78  RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLY 137

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
            A + FD MP R +++WN MI   A      +   LF +M  +   P+  TF GVL AC 
Sbjct: 138 GAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR 197

Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
              +  +  +   +     GL       + ++DL  R G +D      + + +  +S  W
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS-SW 256

Query: 734 RTVLGACCRANCR 746
             ++    +  C 
Sbjct: 257 VAMISGLSKNECE 269


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  557 bits (1436), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 288/676 (42%), Positives = 424/676 (62%), Gaps = 6/676 (0%)

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
           V+ + G +  R  GK+VH   I+ G  + V+VG  LV+MY K  +++D   VF  M  K+
Sbjct: 98  VLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKN 157

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            VSW ++++G  QNG  E+A+  F  M+ +G+  + F+  + L   A+ G +  G Q+H 
Sbjct: 158 VVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHT 217

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             +K GLDS + V N+++++Y+ +  +S    VF  M   + VSWNS+I  F  +  L  
Sbjct: 218 MVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFV-TNGLDL 276

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           EA + +  MR  G       F  ++   ++        Q+H QVIK     +  I+ AL+
Sbjct: 277 EAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALM 336

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM-QRGQRLD 560
             Y KC E+DD  K+F  M   ++ VSW ++ISGY+ N    +AMNL   M  + G   +
Sbjct: 337 VAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPN 396

Query: 561 HFTFATVLSACAS-VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
            FTF++VL+ACA+  A++E+G + H+C +++     + + SALV MY+K G I+ A+  F
Sbjct: 397 EFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVF 456

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
                R++ SWNSMISGYA+HG G K+L +F +M+      D +TF+GV+SAC+HAGLV+
Sbjct: 457 KRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVN 516

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           EG ++F  M + Y ++P +E +SCMVDL  RAG L+K  + INKMP    + IWRT+L A
Sbjct: 517 EGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAA 576

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKK 799
            CR +    +LG  AA  L  ++PQ++  YVLL+N+YA+ G W++ AK RK M   +VKK
Sbjct: 577 -CRVHL-NVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKK 634

Query: 800 EAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES 859
           EAG SW+ +K+    F+AGD SHP+ D IY KL+EL+ +++DAGY P TK+ L D+E E 
Sbjct: 635 EAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEH 694

Query: 860 KEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSN 918
           KE ++S HSE++A+AF ++      PI+I+KNLRVCGDCH+  K ISKI GR+IV+RDSN
Sbjct: 695 KEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSN 754

Query: 919 RFHHFNDGKCSCGDYW 934
           RFHHF  G CSCGDYW
Sbjct: 755 RFHHFKGGSCSCGDYW 770



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 226/442 (51%), Gaps = 10/442 (2%)

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N ++    +N   +EA+  F  +RR G  +   SL   L  C  L   ++G+Q+H + +K
Sbjct: 61  NHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIK 120

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G   DVSV  +L+ +Y     +    +VF  M   + VSW S++  +  +  L  +A+K
Sbjct: 121 CGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQN-GLNEQALK 179

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            +  M+  G  PN  TF  +L   ++    + G QVH  VIK  + +   + N++++ Y 
Sbjct: 180 LFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYS 239

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           K   + D + +F  M E R+ VSWNSMI+G++ N L  +A  L + M   G +L    FA
Sbjct: 240 KSLMVSDAKAVFDSM-ENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFA 298

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP-V 624
           TV+  CA++  +    ++H   ++   +FD+ I +AL+  YSKC  ID A + F +M  V
Sbjct: 299 TVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGV 358

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKL-DGPLPDHVTFVGVLSACSHAGLVDEGFK 683
           +NV SW ++ISGY ++G  D+A+ LF QM+  +G  P+  TF  VL+AC+      E  K
Sbjct: 359 QNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGK 418

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
            F S S   G    L   S +V +  + G ++   E + K  +  + + W +++    + 
Sbjct: 419 QFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANE-VFKRQVDRDLVSWNSMISGYAQH 477

Query: 744 NCRKTELGRKAANMLFEMEPQN 765
            C     G+K+  +  EM  +N
Sbjct: 478 GC-----GKKSLKIFEEMRSKN 494



 Score =  193 bits (490), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 149/549 (27%), Positives = 267/549 (48%), Gaps = 69/549 (12%)

Query: 39  ASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQE 98
           + +LFDE P +       ++  ++    + EA  +F  + R+G   +  +L  VL+ C  
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVC-- 102

Query: 99  CGPSGFKF----GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRD 154
               G  F    G QVHC  +K     D  V   L+ MY    ES +   R+F+E+  ++
Sbjct: 103 ----GCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKT-ESVEDGERVFDEMRVKN 157

Query: 155 LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI--TAAYSSVLSGS 212
           ++SW S+++ Y Q G      KLFS+MQ EG    +KPN +TF +++   AA  +V  G 
Sbjct: 158 VVSWTSLLAGYRQNGLNEQALKLFSQMQLEG----IKPNPFTFAAVLGGLAADGAVEKGV 213

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG- 271
               Q+  MV K+GL S ++VG+++V+ +++      A+ +F+ M  +N VS N ++ G 
Sbjct: 214 ----QVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGF 269

Query: 272 ----------------RRKG------------------------KEVHGYLIRSGL-FDM 290
                           R +G                        K++H  +I++G  FD+
Sbjct: 270 VTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDL 329

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIG-KDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
             +   L+  Y+KC  IDD+  +F  M G ++ VSW  +ISG  QNG  + A+  FC MR
Sbjct: 330 -NIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMR 388

Query: 350 R-DGLMSSNFSLISTLSSCAS-LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           R +G+  + F+  S L++CA+    +  G+Q H   +K G  + + VS+AL+++YA  G 
Sbjct: 389 REEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGN 448

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +    +VF    + D VSWNS+I  +A       +++K + +MR      +G+TFI +++
Sbjct: 449 IESANEVFKRQVDRDLVSWNSMISGYA-QHGCGKKSLKIFEEMRSKNLELDGITFIGVIS 507

Query: 468 AASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           A +   +   G +    ++K Y++       + ++  Y + G ++    +  +M      
Sbjct: 508 ACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGA 567

Query: 527 VSWNSMISG 535
             W ++++ 
Sbjct: 568 TIWRTLLAA 576



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 247/529 (46%), Gaps = 59/529 (11%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           ++++F+E   + L   N ++  +S+         LF  ++R G      P + +  S + 
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSG-----SPTDGSSLSCVL 99

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
                 L    + +Q+     K G + D+ VG++LV  + +  +     ++F++M  KNV
Sbjct: 100 KV-CGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNV 158

Query: 263 VSMNGLMEGRR-----------------------------------------KGKEVHGY 281
           VS   L+ G R                                         KG +VH  
Sbjct: 159 VSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTM 218

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           +I+SGL   + VGN +VNMY+K   + D+++VF  M  +++VSWN+MI+G   NG   EA
Sbjct: 219 VIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEA 278

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
              F  MR +G+  +     + +  CA++  +   +Q+H + +K G D D+++  AL+  
Sbjct: 279 FELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVA 338

Query: 402 YADAGYLSRCLKVFFLMPE-HDQVSWNSVIGAFADSEALVSEAVKYYLDMRR-AGWSPNG 459
           Y+    +    K+F +M    + VSW ++I  +  +      A+  +  MRR  G  PN 
Sbjct: 339 YSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQN-GRTDRAMNLFCQMRREEGVEPNE 397

Query: 460 VTFINIL-AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
            TF ++L A A+  +  + G Q H+  IK   +N   + +AL++ Y K G ++   ++F 
Sbjct: 398 FTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFK 457

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
           R  + RD VSWNSMISGY  +    K++ +   M  +   LD  TF  V+SAC     + 
Sbjct: 458 RQVD-RDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVN 516

Query: 579 RGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMP 623
            G       V+   ++ +V      S +VD+YS+ G ++ A    + MP
Sbjct: 517 EGQRYFDLMVK---DYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMP 562



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 225/475 (47%), Gaps = 55/475 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H Q +K GF  DV +  +L+++Y++   +    ++FDEM  +N VSW  +++GY  
Sbjct: 111 GKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQ 170

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G++ +A K+F +M   G   N +   +VL      G    + G+QVH +V+KS      
Sbjct: 171 NGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADG--AVEKGVQVHTMVIKSGLDSTI 228

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V N ++ MY   L  +D A+ +F+ +E R+ +SWNS+I+ +   G  +  F+LF RM+ 
Sbjct: 229 FVGNSMVNMYSKSLMVSD-AKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           EG    +K  +  F ++I    +  +      +Q+   V K G   DL + +AL+  +++
Sbjct: 288 EG----VKLTQTIFATVIKLCAN--IKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341

Query: 244 LGNFYYARKIFEQMIQ-KNVVSMNGLMEG-----------------RR------------ 273
                 A K+F  M   +NVVS   ++ G                 RR            
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFS 401

Query: 274 --------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                         +GK+ H   I+SG  + + V + LV MYAK G I+ +  VF+  + 
Sbjct: 402 SVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVD 461

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           +D VSWN+MISG  Q+GC ++++  F  MR   L     + I  +S+C   G +  GQ+ 
Sbjct: 462 RDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRY 521

Query: 380 HGEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
               +K   +   +   + ++ LY+ AG L + + +   MP       W +++ A
Sbjct: 522 FDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAA 576



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 53/99 (53%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K FH   +K GF+  + + + L+ +Y + G++ SA+++F    DR+ VSW  ++SGY
Sbjct: 415 EQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGY 474

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   ++ K+F+EM      L+      V+ AC   G
Sbjct: 475 AQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAG 513


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 328/951 (34%), Positives = 527/951 (55%), Gaps = 60/951 (6%)

Query: 29  VYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYA 88
           +Y R G L  A   F ++  RN VSW  ++S Y+      EA  +F  M+  G   N   
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE 148
           L +VL +C        + G+ VH L L+     + LV+  L+ MYG C    D A+ +FE
Sbjct: 61  LVAVLNSCGSFRE--LRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLD-AQSVFE 117

Query: 149 EIETRDLISWNSIISVYSQRGDTISV-FKLFSRMQREGFRYSLKPNEYTFGSLITAAYS- 206
           E+  +++++WN+++ VYS +G    +  +LF+RM  EG    +K N  TF +++ +    
Sbjct: 118 EMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEG----VKANVITFLNVLNSVVDP 173

Query: 207 -SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
            ++  G +    I + V+++    D++V +ALV+ + + G+   ARK+F+ M  ++V + 
Sbjct: 174 DALRKGKF----IHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTW 229

Query: 266 NGLM---------------------EGRRKGKEV---------------HGYLIRSGL-- 287
           N ++                     EG R  +                 HG  +R  +  
Sbjct: 230 NSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISE 289

Query: 288 --FDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
             F++ + VG  L+ MYA+C + +D+  VF  M   + ++W+ +I+    +G   EA+  
Sbjct: 290 TSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRY 349

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F  M+++G++ +  + IS L+   +   +    +IH    + GLD   ++ NAL+++Y  
Sbjct: 350 FRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGR 409

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
                    VF  +   + +SWNS+IG +   E    +A++ +  M++ G  P+ V F+ 
Sbjct: 410 CESPDDARTVFDQLELPNLISWNSMIGIYVQCERH-DDALQLFRTMQQQGIQPDRVNFMT 468

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           IL A +  S G+    VH  V +  +     ++ +L++ Y K GE+D  E I   M E++
Sbjct: 469 ILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQ 528

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
              +WN +I+GY  +    +A+     +      +D  TF +VL+AC S  +L  G  +H
Sbjct: 529 I-TAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIH 587

Query: 585 ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGD 644
           +  V   L+ DV++ +AL +MYSKCG ++ A R FD MP+R+  SWN M+  YA+HG  +
Sbjct: 588 SNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESE 647

Query: 645 KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCM 704
           + L L  +M+ +G   + +TFV VLS+CSHAGL+ EG ++F S+    G+  + E + C+
Sbjct: 648 EVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCL 707

Query: 705 VDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ 764
           VDLLGRAG+L + E++I+KMP+ P  + W ++LGA CR   +  + G+ AA  L E++P 
Sbjct: 708 VDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGA-CRVQ-KDLDRGKLAAGKLLELDPG 765

Query: 765 NAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPE 824
           N+   V+L+N+Y+  G W++ AK R+AM    VKK  G S + +K+ VH F   D SHP 
Sbjct: 766 NSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPR 825

Query: 825 KDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKL- 883
              IY+K++EL   MR+AGYVP TK  L D++ E KE L++YHSEK+A+AF L    +  
Sbjct: 826 AAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETS 885

Query: 884 PIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            + I KNLRVC DCH+A KFISKI GREIV+RD++RFHHF DG CSC DYW
Sbjct: 886 SLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936



 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 177/679 (26%), Positives = 320/679 (47%), Gaps = 59/679 (8%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +D  L H   L+ GF  +  +   L+N+Y + G L  A  +F+EM ++N V+W  ++  Y
Sbjct: 75  RDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVY 134

Query: 62  THKGMS-NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           + +G     A ++F  M+  G   N     +VL +  +  P   + G  +H  V +S  +
Sbjct: 135 SLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVD--PDALRKGKFIHSCVRESEHS 192

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D  V+  L+  Y  C   TD AR++F+ +  R + +WNS+IS YS    +   F +F R
Sbjct: 193 LDVFVNTALVNTYTKCGSLTD-ARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQR 251

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           MQ+EG R     +  TF S++ A  +  ++  G ++ + I     +     DL+VG+AL+
Sbjct: 252 MQQEGERC----DRVTFLSILDACVNPETLQHGKHVRESI----SETSFELDLFVGTALI 303

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVS---------------------------------- 264
           + +AR  +   A ++F +M Q N+++                                  
Sbjct: 304 TMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRV 363

Query: 265 -----MNGLM--EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                +NG     G  +   +H  +   GL D   + N LVN+Y +C + DD+R+VF  +
Sbjct: 364 TFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQL 423

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
              + +SWN+MI    Q   +++A+  F  M++ G+     + ++ L +C         +
Sbjct: 424 ELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRK 483

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
            +H    + GL     V  +L+++YA AG L     +   M E    +WN +I  +A   
Sbjct: 484 LVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYA-LH 542

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
               EA++ Y  ++      + VTFI++L A +S +    G  +H+  ++  + ++  ++
Sbjct: 543 GRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVK 602

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ 557
           NAL + Y KCG M++  +IF  M   R  VSWN M+  Y  +    + + L+  M Q G 
Sbjct: 603 NALTNMYSKCGSMENARRIFDSMP-IRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGV 661

Query: 558 RLDHFTFATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
           +L+  TF +VLS+C+    +  G +  H+ G    +E        LVD+  + G++  A 
Sbjct: 662 KLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAE 721

Query: 617 RFFDLMPVR-NVYSWNSMI 634
           ++   MP+   + +W S++
Sbjct: 722 KYISKMPLEPGIVTWASLL 740



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 153/326 (46%), Gaps = 16/326 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  KL H  + + G      +  +L+N+Y + G+L  A  +  EM ++   +W  +++GY
Sbjct: 480 RTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGY 539

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G S EA + ++++      +++    SVL AC     +    G  +H   ++     
Sbjct: 540 ALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACT--SSTSLAEGKMIHSNAVECGLDS 597

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D +V N L  MY  C  S + ARRIF+ +  R  +SWN ++  Y+Q G++  V KL  +M
Sbjct: 598 DVIVKNALTNMYSKC-GSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKM 656

Query: 182 QREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           ++EG    +K N  TF S++++ +++ +++        L   +   + ++ Y    LV  
Sbjct: 657 EQEG----VKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHY--GCLVDL 710

Query: 241 FARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG--- 296
             R G    A K   +M ++  +V+   L+   R  K++    + +G    +  GN    
Sbjct: 711 LGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSAS 770

Query: 297 --LVNMYAKCGTIDDSRSVFRFMIGK 320
             L N+Y++ G   ++  + R M  +
Sbjct: 771 VVLSNIYSERGDWKNAAKLRRAMASR 796


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 300/715 (41%), Positives = 436/715 (60%), Gaps = 23/715 (3%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNV----VSMNGLMEG------RRKGKEVHGYLIR 284
           +AL++G+A+LG+     K+F +M +        +++ +++G       R+GK +H   +R
Sbjct: 20  NALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKVLHALALR 79

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
           SG      +G  LV+MY+KCGT+ D+  VF  +   D V+W+ MI+GLDQ G  +EA   
Sbjct: 80  SGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAEL 139

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F  MRR G   + F+L S +S+  ++G +  GQ IHG   K G +SD  VSN L+ +Y  
Sbjct: 140 FHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMK 199

Query: 405 AGYLSRCL----KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
               SRC+    KVF  M   D VSWN+++  F DS+       + +  M   G+ PN  
Sbjct: 200 ----SRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQT-CGRGPRIFYQMLLEGFKPNMF 254

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           TFI++L + SS    + G QVHA +IK +  ++  +  AL+  Y K   ++D    F R+
Sbjct: 255 TFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRL 314

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
             R D  SW  +ISGY   +   KA+     M + G + + +T A+ LS C+ +ATLE G
Sbjct: 315 VNR-DIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENG 373

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
            ++HA  V+A    D+ +GSALVD+Y KCG +++A   F  +  R++ SWN++ISGY++H
Sbjct: 374 RQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQH 433

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
           G G+KAL  F  M  +G +PD  TF+GVLSACS  GLV+EG K F SMS++YG+ P +E 
Sbjct: 434 GQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEH 493

Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
           ++CMVD+LGRAG+ ++++ FI +M +TP SLIW TVLGAC        + G KAA  LFE
Sbjct: 494 YACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHG--NVDFGEKAAKKLFE 551

Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           MEP    +Y+LL+N++AS G+W+DV   R  M    +KKE GCSWV +   VHVF++ D 
Sbjct: 552 MEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDG 611

Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTR 879
           SHP+   IY KL +L Q +   GYVP+T+  L ++  + K + + YHSE++A++F +L+ 
Sbjct: 612 SHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSERLALSFALLST 671

Query: 880 NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           N+  PIRI KNLR+C DCH   K IS I  +EIV+RD  RFHHF  G CSC D W
Sbjct: 672 NAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTCSCQDRW 726



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 228/428 (53%), Gaps = 4/428 (0%)

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +  +F  M  K+ VSWN +++G  Q G  ++ +  FC M+      S F+L + L  CA+
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
            G +  G+ +H   L+ G + D  +  +L+ +Y+  G +   LKVF  +   D V+W+++
Sbjct: 64  TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           I    D +    EA + +  MRR G  PN  T  ++++ A++    + G  +H  + KY 
Sbjct: 124 ITGL-DQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYG 182

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV 549
             ++  + N L+  Y K   ++D  K+F  M+   D VSWN+++SG+  ++   +   + 
Sbjct: 183 FESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTN-PDLVSWNALLSGFYDSQTCGRGPRIF 241

Query: 550 WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
           + M+  G + + FTF +VL +C+S+   E G +VHA  ++   + D  +G+ALVDMY+K 
Sbjct: 242 YQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKA 301

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
             ++ A   FD +  R+++SW  +ISGYA+    +KA+  F QM+ +G  P+  T    L
Sbjct: 302 RCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCL 361

Query: 670 SACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPN 729
           S CSH   ++ G +   +++   G    +   S +VDL G+ G ++  E  I K  I+ +
Sbjct: 362 SGCSHMATLENG-RQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEA-IFKGLISRD 419

Query: 730 SLIWRTVL 737
            + W T++
Sbjct: 420 IVSWNTII 427



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 160/590 (27%), Positives = 262/590 (44%), Gaps = 84/590 (14%)

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
           + A R+F  +  ++ +SWN++++ Y+Q GD   V KLF +M+    ++S    ++T  ++
Sbjct: 2   ELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFS----KFTLSTV 57

Query: 201 ITAAYSSVLSGSYLLQQIL-AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           +    +   +GS    ++L A+  ++G   D ++G +LV  +++ G  Y A K+F ++  
Sbjct: 58  LKGCAN---TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRN 114

Query: 260 KNVVSMNGLMEG-----------------RRK------------------------GKEV 278
            +VV+ + ++ G                 RRK                        G+ +
Sbjct: 115 PDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSI 174

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           HG + + G      V N L+ MY K   ++D   VF  M   D VSWN ++SG   +   
Sbjct: 175 HGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTC 234

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
                 F  M  +G   + F+ IS L SC+SL     G+Q+H   +K   D D  V  AL
Sbjct: 235 GRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTAL 294

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           + +YA A  L      F  +   D  SW  +I  +A ++    +AVKY+  M+R G  PN
Sbjct: 295 VDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQ-AEKAVKYFRQMQREGIKPN 353

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
             T  + L+  S  +  + G Q+HA  +K     +  + +AL+  YGKCG M+  E IF 
Sbjct: 354 EYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFK 413

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
            +   RD VSWN++ISGY  +    KA+     M+  G   D  TF  VLSAC+ +  +E
Sbjct: 414 GLIS-RDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVE 472

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
            G +                            R D  S+ + + P  ++  +  M+    
Sbjct: 473 EGKK----------------------------RFDSMSKIYGINP--SIEHYACMVDILG 502

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           R G  ++      +M L    P  + +  VL AC   G VD G K  K +
Sbjct: 503 RAGKFNEVKIFIEEMNLT---PYSLIWETVLGACKLHGNVDFGEKAAKKL 549



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 138/537 (25%), Positives = 247/537 (45%), Gaps = 52/537 (9%)

Query: 39  ASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQE 98
           A +LF  MP++N VSW  +++GY   G   +  K+F +M       +++ L +VL+ C  
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63

Query: 99  CGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISW 158
            G    + G  +H L L+S    D  +   L+ MY  C    D A ++F +I   D+++W
Sbjct: 64  TG--SLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYD-ALKVFTKIRNPDVVAW 120

Query: 159 NSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQI 218
           +++I+   Q+G      +LF  M+R+G R    PN++T  SL++ A +  +      Q I
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGAR----PNQFTLSSLVSTATN--MGDLRYGQSI 174

Query: 219 LAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG------- 271
              + K G  SD  V + L+  + +        K+FE M   ++VS N L+ G       
Sbjct: 175 HGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTC 234

Query: 272 ----------------------------------RRKGKEVHGYLIRSGLFDMVAVGNGL 297
                                                GK+VH ++I++   D   VG  L
Sbjct: 235 GRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTAL 294

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           V+MYAK   ++D+   F  ++ +D  SW  +ISG  Q    E+A+  F  M+R+G+  + 
Sbjct: 295 VDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNE 354

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
           ++L S LS C+ +  +  G+Q+H   +K G   D+ V +AL+ LY   G +     +F  
Sbjct: 355 YTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKG 414

Query: 418 MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
           +   D VSWN++I  ++       +A++ +  M   G  P+  TFI +L+A S   + + 
Sbjct: 415 LISRDIVSWNTIISGYS-QHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEE 473

Query: 478 GHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           G +    + K Y +         ++   G+ G+ ++ +     M+     + W +++
Sbjct: 474 GKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVL 530



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 236/479 (49%), Gaps = 62/479 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ K+ H   L+ G   D FL  +L+++Y + G +  A K+F ++ + + V+W+ +++G 
Sbjct: 68  REGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGL 127

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
             +G   EA ++F  M R G   N++ L S++      G    ++G  +H  + K     
Sbjct: 128 DQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGD--LRYGQSIHGCICKYGFES 185

Query: 122 DGLVSNVLIAMY--GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           D LVSN LI MY    C+E      ++FE +   DL+SWN+++S +          ++F 
Sbjct: 186 DNLVSNPLIMMYMKSRCVED---GNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFY 242

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV- 238
           +M  EGF    KPN +TF S++ +  SS+L   +  +Q+ A + K     D +VG+ALV 
Sbjct: 243 QMLLEGF----KPNMFTFISVLRSC-SSLLDPEF-GKQVHAHIIKNSSDDDDFVGTALVD 296

Query: 239 ------------------------------SGFARLGNFYYARKIFEQM----IQKNVVS 264
                                         SG+A+      A K F QM    I+ N  +
Sbjct: 297 MYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYT 356

Query: 265 MNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
           +   + G         G+++H   +++G F  + VG+ LV++Y KCG ++ + ++F+ +I
Sbjct: 357 LASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLI 416

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            +D VSWNT+ISG  Q+G  E+A+  F  M  +G+M    + I  LS+C+ +G +  G++
Sbjct: 417 SRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKK 476

Query: 379 IHGEGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFF----LMPEHDQVSWNSVIGA 432
                 K+ G++  +     ++ +   AG  +  +K+F     L P    + W +V+GA
Sbjct: 477 RFDSMSKIYGINPSIEHYACMVDILGRAGKFNE-VKIFIEEMNLTPY--SLIWETVLGA 532



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 151/327 (46%), Gaps = 22/327 (6%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  I+K+    D F+   L+++Y +   L  A   FD + +R+  SW  I+SGY  
Sbjct: 272 GKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQ 331

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
              + +A K F++M R G   N Y L S L  C     +  + G Q+H + +K+    D 
Sbjct: 332 TDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHM--ATLENGRQLHAVAVKAGHFGDI 389

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V + L+ +YG C    + A  IF+ + +RD++SWN+IIS YSQ G      + F  M  
Sbjct: 390 FVGSALVDLYGKC-GCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLS 448

Query: 184 EGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           EG    + P+E TF G L   ++  ++      ++  +M K  G+   +   + +V    
Sbjct: 449 EG----IMPDEATFIGVLSACSFMGLVEEGK--KRFDSMSKIYGINPSIEHYACMVDILG 502

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYL-----IRSGLFDMVAVGNG- 296
           R G F   +   E+M   N+   + + E      ++HG +         LF+M  + +  
Sbjct: 503 RAGKFNEVKIFIEEM---NLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSS 559

Query: 297 ---LVNMYAKCGTIDDSRSVFRFMIGK 320
              L N++A  G  DD R++   M  +
Sbjct: 560 YILLSNIFASKGRWDDVRNIRALMTSR 586



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 1/167 (0%)

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           M+  E++F  M E+ + VSWN++++GY       K + L   M +   +   FT +TVL 
Sbjct: 1   MELAERLFFGMPEK-NGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLK 59

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
            CA+  +L  G  +HA  +R+  E D  +G +LVDMYSKCG +  A + F  +   +V +
Sbjct: 60  GCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVA 119

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
           W++MI+G  + GHG +A  LF  M+  G  P+  T   ++S  ++ G
Sbjct: 120 WSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMG 166


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 289/667 (43%), Positives = 423/667 (63%), Gaps = 16/667 (2%)

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VHGY I+ GL   V V   LVN+Y+KCG + D+R +F +M  +D V WN M+ G  Q G 
Sbjct: 205 VHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGL 264

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW--IMLGQQIHGEGLKLGLDSDVSVS 395
            +EA   F    R GL    FS+   L+ C   G   + LG+Q+HG  +K GLDSDVSV+
Sbjct: 265 EKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVA 324

Query: 396 NALLSLYADAG--YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           N+L+++Y+  G  Y +R  +VF  M   D +SWNS+I + A S +L  E+V  ++D+   
Sbjct: 325 NSLVNMYSKMGCAYFAR--EVFNDMKHLDLISWNSMISSCAQS-SLEEESVNLFIDLLHE 381

Query: 454 GWSPNGVTFINILAAASSFSMGKL-----GHQVHAQVIKYNVANETTIENALLSCYGKCG 508
           G  P+  T  +I  A ++ + G L     G Q+HA  IK    ++  + + +L  Y KCG
Sbjct: 382 GLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCG 441

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
           +M +   +F  +S   D+V+W SMISG + N    +A+ +   M Q     D +TFAT++
Sbjct: 442 DMVNAGIVFNYISAP-DDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLI 500

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
            A + V  LE+G ++HA  ++     D  +G++LVDMY+KCG I+ A R F  M VRN+ 
Sbjct: 501 KASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIA 560

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
            WN+M+ G A+HG+ ++A+ LF  MK  G  PD V+F+G+LSACSHAGL  E +++  SM
Sbjct: 561 LWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSM 620

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT 748
              YG+ P++E +SC+VD LGRAG + + ++ I  MP   ++ I R +LGAC        
Sbjct: 621 PNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQG--DV 678

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
           E G++ A  LF +EP ++  YVLL+N+YA+  +W+DV  ARK MK   VKK+ G SW+ +
Sbjct: 679 ETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDV 738

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
           K+ +H+FV  D SHP+ D+IY+K++E+ + +R+ GYVP T+F L D+E E KE  + YHS
Sbjct: 739 KNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHS 798

Query: 869 EKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGK 927
           EK+A+A+ +++  +   IR++KNLRVCGDCH+A K+ISK+  REIVLRD+NRFHHF DG 
Sbjct: 799 EKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGV 858

Query: 928 CSCGDYW 934
           CSCGDYW
Sbjct: 859 CSCGDYW 865



 Score =  219 bits (559), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 165/591 (27%), Positives = 274/591 (46%), Gaps = 69/591 (11%)

Query: 106 FGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY 165
            G   H  ++ S    D  +SN L+ MY  C  S   AR++F+    RDL++WN+I+  Y
Sbjct: 95  LGKCTHARIVVSGSAGDHFLSNNLLTMYSKC-GSLSSARQVFDTTPERDLVTWNAILGAY 153

Query: 166 SQRGDT--------ISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ 217
           +   D+        + +F+L         R +L P       L     S  L   +  + 
Sbjct: 154 AASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAP------VLKLCLNSGCL---WAAEG 204

Query: 218 ILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK--- 274
           +     K GL  D++V  ALV+ +++ G    AR +F+ M +++VV  N +++G  +   
Sbjct: 205 VHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGL 264

Query: 275 ----------------------------------------GKEVHGYLIRSGLFDMVAVG 294
                                                   GK+VHG  ++SGL   V+V 
Sbjct: 265 EKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVA 324

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           N LVNMY+K G    +R VF  M   D +SWN+MIS   Q+   EE++  F  +  +GL 
Sbjct: 325 NSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLK 384

Query: 355 SSNFSLIS-TLSS----CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
             +F+L S TL++    C  L  +  G+QIH   +K G DSD+ V++ +L +Y   G + 
Sbjct: 385 PDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMV 444

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
               VF  +   D V+W S+I    D+     +A++ Y  MR++   P+  TF  ++ A+
Sbjct: 445 NAGIVFNYISAPDDVAWTSMISGCVDN-GNEDQALRIYHRMRQSRVMPDEYTFATLIKAS 503

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
           S  +  + G Q+HA VIK +  ++  +  +L+  Y KCG ++D  ++F +M+ R   + W
Sbjct: 504 SCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIAL-W 562

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-VHACGV 588
           N+M+ G   +    +A+NL   M   G   D  +F  +LSAC+         E +H+   
Sbjct: 563 NAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPN 622

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
              +E ++   S LVD   + G +  A +  + MP +   S N  + G  R
Sbjct: 623 DYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACR 673



 Score =  215 bits (548), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 149/569 (26%), Positives = 271/569 (47%), Gaps = 62/569 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY--- 61
           K  H +I+  G A D FL N L+ +Y + G L+SA ++FD  P+R+ V+W  I+  Y   
Sbjct: 97  KCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAAS 156

Query: 62  --THKGMSNEACKMFKEMVRAGF-LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
             ++ G + E   +F+ ++RA      R  L  VL+ C   G      G  VH   +K  
Sbjct: 157 VDSNDGNAQEGLHLFR-LLRASLGSTTRMTLAPVLKLCLNSGCLWAAEG--VHGYAIKIG 213

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
             +D  VS  L+ +Y  C    D AR +F+ +  RD++ WN ++  Y Q G     F+LF
Sbjct: 214 LEWDVFVSGALVNIYSKCGRMRD-ARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLF 272

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           S   R G R    P+E++   ++     +      L +Q+  +  K+GL SD+ V ++LV
Sbjct: 273 SEFHRSGLR----PDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLV 328

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLM---------------------EGRR---- 273
           + ++++G  Y+AR++F  M   +++S N ++                     EG +    
Sbjct: 329 NMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHF 388

Query: 274 ---------------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
                                +GK++H + I++G    + V +G+++MY KCG + ++  
Sbjct: 389 TLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGI 448

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           VF ++   D V+W +MISG   NG  ++A+  +  MR+  +M   ++  + + + + +  
Sbjct: 449 VFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTA 508

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
           +  G+Q+H   +KL   SD  V  +L+ +YA  G +    ++F  M   +   WN+++  
Sbjct: 509 LEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVG 568

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVA 491
            A       EAV  +  M+  G  P+ V+FI IL+A S   +    ++ +H+    Y + 
Sbjct: 569 LA-QHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIE 627

Query: 492 NETTIENALLSCYGKCGEMDDCEKIFARM 520
            E    + L+   G+ G + + +K+   M
Sbjct: 628 PEIEHYSCLVDALGRAGLVQEADKVIETM 656



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 241/484 (49%), Gaps = 34/484 (7%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI----S 330
           GK  H  ++ SG      + N L+ MY+KCG++  +R VF     +D V+WN ++    +
Sbjct: 96  GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 155

Query: 331 GLDQN-GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
            +D N G  +E +  F  +R     ++  +L   L  C + G +   + +HG  +K+GL+
Sbjct: 156 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLE 215

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
            DV VS AL+++Y+  G +     +F  M E D V WN ++  +     L  EA + + +
Sbjct: 216 WDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYV-QLGLEKEAFQLFSE 274

Query: 450 MRRAGWSPNGVTFINIL-----AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
             R+G  P+  +   IL     A      +GK   QVH   +K  + ++ ++ N+L++ Y
Sbjct: 275 FHRSGLRPDEFSVQLILNGCLWAGTDDLELGK---QVHGIAVKSGLDSDVSVANSLVNMY 331

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF-- 562
            K G      ++F  M +  D +SWNSMIS    + L  +++NL   ++  G + DHF  
Sbjct: 332 SKMGCAYFAREVFNDM-KHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTL 390

Query: 563 ---TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
              T AT   AC  +  L++G ++HA  ++A  + D+ + S ++DMY KCG +  A   F
Sbjct: 391 ASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVF 450

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           + +   +  +W SMISG   +G+ D+AL ++ +M+    +PD  TF  ++ A S    ++
Sbjct: 451 NYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALE 510

Query: 680 EGFKHFKSMSQVYGLIPQLEQFS------CMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
           +G        Q++  + +L+  S       +VD+  + G ++       KM +  N  +W
Sbjct: 511 QG-------RQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR-NIALW 562

Query: 734 RTVL 737
             +L
Sbjct: 563 NAML 566



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 223/476 (46%), Gaps = 53/476 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H   +K G  +DVF+   L+N+Y + G +  A  LFD M +R+ V W  ++ GY  
Sbjct: 202 AEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQ 261

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+  EA ++F E  R+G   + +++  +L  C   G    + G QVH + +KS    D 
Sbjct: 262 LGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDV 321

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V+N L+ MY S +     AR +F +++  DLISWNS+IS  +Q         LF  +  
Sbjct: 322 SVANSLVNMY-SKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLH 380

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL----QQILAMVKKAGLLSDLYVGS---- 235
           EG    LKP+ +T  S IT A ++   G  +L    +QI A   KAG  SDL+V S    
Sbjct: 381 EG----LKPDHFTLAS-ITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILD 435

Query: 236 ---------------------------ALVSGFARLGNFYYARKIFEQMIQKNV------ 262
                                      +++SG    GN   A +I+ +M Q  V      
Sbjct: 436 MYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYT 495

Query: 263 ----VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
               +  +  +    +G+++H  +I+        VG  LV+MYAKCG I+D+  +F+ M 
Sbjct: 496 FATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMN 555

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-Q 377
            ++   WN M+ GL Q+G  EEA+  F +M+  G+     S I  LS+C+  G      +
Sbjct: 556 VRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYE 615

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN-SVIGA 432
            +H      G++ ++   + L+     AG +    KV   MP     S N +++GA
Sbjct: 616 YLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGA 671



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 186/388 (47%), Gaps = 14/388 (3%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L +  S   ++LG+  H   +  G   D  +SN LL++Y+  G LS   +VF   PE D 
Sbjct: 84  LRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDL 143

Query: 424 VSWNSVIGAFADS----EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
           V+WN+++GA+A S    +    E +  +  +R +  S   +T   +L    +        
Sbjct: 144 VTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAE 203

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
            VH   IK  +  +  +  AL++ Y KCG M D   +F  M E RD V WN M+ GY+  
Sbjct: 204 GVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRE-RDVVLWNMMLKGYVQL 262

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC--ASVATLERGMEVHACGVRACLEFDVV 597
            L  +A  L     + G R D F+   +L+ C  A    LE G +VH   V++ L+ DV 
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVS 322

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           + ++LV+MYSK G   +A   F+ M   ++ SWNSMIS  A+    ++++ LF  +  +G
Sbjct: 323 VANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEG 382

Query: 658 PLPDHVTFVGVL-----SACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG 712
             PDH T   +       AC    L+D+G K   + +   G    L   S ++D+  + G
Sbjct: 383 LKPDHFTLASITLATAAKACGCLVLLDQG-KQIHAHAIKAGFDSDLHVNSGILDMYIKCG 441

Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGAC 740
           ++       N +   P+ + W +++  C
Sbjct: 442 DMVNAGIVFNYIS-APDDVAWTSMISGC 468



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 136/295 (46%), Gaps = 21/295 (7%)

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY 536
           LG   HA+++    A +  + N LL+ Y KCG +    ++F    ER D V+WN+++  Y
Sbjct: 95  LGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPER-DLVTWNAILGAY 153

Query: 537 I-----HNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC 591
                 ++    + ++L   +          T A VL  C +   L     VH   ++  
Sbjct: 154 AASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIG 213

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
           LE+DV +  ALV++YSKCGR+  A   FD M  R+V  WN M+ GY + G   +A  LFS
Sbjct: 214 LEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFS 273

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVD-EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
           +    G  PD  +   +L+ C  AG  D E  K    ++   GL   +   + +V++  +
Sbjct: 274 EFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSK 333

Query: 711 AGELDKIEEFINKMP----ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM 761
            G      E  N M     I+ NS+I          ++C ++ L  ++ N+  ++
Sbjct: 334 MGCAYFAREVFNDMKHLDLISWNSMI----------SSCAQSSLEEESVNLFIDL 378



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 157/324 (48%), Gaps = 16/324 (4%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   +K GF  D+ + + ++++Y++ GD+ +A  +F+ +   + V+W  ++SG    
Sbjct: 412 KQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDN 471

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G  ++A +++  M ++  + + Y   ++++A   C  +  + G Q+H  V+K +   D  
Sbjct: 472 GNEDQALRIYHRMRQSRVMPDEYTFATLIKA-SSC-VTALEQGRQLHANVIKLDCVSDPF 529

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V   L+ MY  C    D A R+F+++  R++  WN+++   +Q G+      LF  M+  
Sbjct: 530 VGTSLVDMYAKCGNIED-AYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSH 588

Query: 185 GFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           G    ++P+  +F  +++A +++ + S +Y  + + +M    G+  ++   S LV    R
Sbjct: 589 G----IEPDRVSFIGILSACSHAGLTSEAY--EYLHSMPNDYGIEPEIEHYSCLVDALGR 642

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----L 297
            G    A K+ E M  K   S+N  + G  R +G    G  + + LF +    +     L
Sbjct: 643 AGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLL 702

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKD 321
            N+YA     DD     + M  K+
Sbjct: 703 SNIYAAANRWDDVTDARKMMKRKN 726



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 48/99 (48%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H  ++K     D F+  +L+++Y + G++  A +LF +M  RN   W  ++ G 
Sbjct: 510 EQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGL 569

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G + EA  +FK M   G   +R +   +L AC   G
Sbjct: 570 AQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAG 608


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 298/787 (37%), Positives = 452/787 (57%), Gaps = 48/787 (6%)

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
           +K NE+ F S++ A   +V     L +Q+  +V   G  SD +V ++LV  +A+ G F  
Sbjct: 6   IKCNEFAFPSVLKAC--TVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGD 63

Query: 250 ARKIFEQMIQKNVVSMNGL----------------------------------------- 268
           AR +F+ +  ++VVS N L                                         
Sbjct: 64  ARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTG 123

Query: 269 MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
           +E   +G+++HGYLI+ G        N LV+MYAK G ++D+ SVF  +   D VSWN +
Sbjct: 124 LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAI 183

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           I+G   +  +  A+     M + G+  + F+L S L +CA +    LG+Q+H   +K+ +
Sbjct: 184 IAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDM 243

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
            SD  +   L+ +Y+    +     VF LMPE D ++WN+VI   + +E    EA   + 
Sbjct: 244 GSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEE-DEEAASLFP 302

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            M   G   N  T   +L + ++     +  Q+HA  +K     +  + N+L+  YGKCG
Sbjct: 303 LMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCG 362

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
            ++D  ++F   S   D V + S+++ Y  +    +A+ L   M  RG + D F  +++L
Sbjct: 363 HVEDATRVFEE-SPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLL 421

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
           +ACAS++  E+G +VH   ++     D+  G++LV+MY+KCG I+ AS  F  +PVR + 
Sbjct: 422 NACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIV 481

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           SW++MI G A+HG+G +AL LF QM   G  P+H+T V VL AC+HAGLV E   +F SM
Sbjct: 482 SWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSM 541

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT 748
             ++G+ P  E ++CM+DLLGRAG+L+   E +NKMP   N+L+W  +LGA  R + +  
Sbjct: 542 KILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGA-ARIH-KNI 599

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
           +LG +AA ML  +EP+ +  +VLLAN+YAS G W+ VA+ R+ MK+ +VKKE G SW+ +
Sbjct: 600 DLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEV 659

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
           KD V+ F+ GD SH     IY KL EL+  ++ AGYVP  +  L D+E   KE L+ +HS
Sbjct: 660 KDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHS 719

Query: 869 EKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGK 927
           EK+AVAF ++      PIR+ KNLR+C DCH+  KFISKIV REI++RD+NRFHHF +G 
Sbjct: 720 EKLAVAFGLIATPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGS 779

Query: 928 CSCGDYW 934
           CSCG+YW
Sbjct: 780 CSCGEYW 786



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 168/607 (27%), Positives = 287/607 (47%), Gaps = 54/607 (8%)

Query: 81  GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST 140
           G   N +A  SVL+AC          G QVH +V+ +    D  V+N L+ +Y  C    
Sbjct: 5   GIKCNEFAFPSVLKACTVT--KDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFG 62

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
           D AR +F+ I  R ++SWN++ S Y           LF  M   G R    PNE++  S+
Sbjct: 63  D-ARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIR----PNEFSLSSM 117

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
           I       L  S   ++I   + K G  SD +  +ALV  +A++G    A  +F+++ + 
Sbjct: 118 INVCTG--LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKP 175

Query: 261 NVVSMNGLMEG-----------------------------------------RRKGKEVH 279
           ++VS N ++ G                                         R  G+++H
Sbjct: 176 DIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLH 235

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
             LI+  +     +G GL++MY+KC ++DD+R VF+ M  +D ++WN +ISG  QN   E
Sbjct: 236 SSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDE 295

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           EA   F  M  +G+  +  +L + L S A+L    + +QIH   LK G + D  V N+L+
Sbjct: 296 EAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLI 355

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
             Y   G++    +VF   P  D V + S++ A+A  +    EA++ YL+M+  G  P+ 
Sbjct: 356 DTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYA-QDGQGEEALRLYLEMQDRGIKPDS 414

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
               ++L A +S S  + G QVH  ++K+   ++    N+L++ Y KCG ++D    F+R
Sbjct: 415 FVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSR 474

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL-E 578
           +   R  VSW++MI G   +    +A+ L   M++ G   +H T  +VL AC     + E
Sbjct: 475 IP-VRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAE 533

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGY 637
                ++  +   +E      + ++D+  + G+++ A    + MP + N   W +++   
Sbjct: 534 AKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAA 593

Query: 638 ARHGHGD 644
             H + D
Sbjct: 594 RIHKNID 600



 Score =  206 bits (523), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 146/581 (25%), Positives = 269/581 (46%), Gaps = 55/581 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  ++  GF  D F+ N+L+ +Y + G    A  LFD +PDR+ VSW  + S Y H 
Sbjct: 30  KQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHS 89

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            M  EA  +F +MV +G   N ++L S++  C   G      G ++H  ++K     D  
Sbjct: 90  DMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCT--GLEDSVQGRKIHGYLIKLGYDSDAF 147

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
            +N L+ MY       D A  +F+EI   D++SWN+II+            +L   M + 
Sbjct: 148 SANALVDMYAKVGILED-ASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKS 206

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G    + PN +T  S + A     L    L +Q+ + + K  + SD ++G  L+  +++ 
Sbjct: 207 G----MCPNMFTLSSALKACAGMALR--ELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKC 260

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE--------------------------- 277
            +   AR +F+ M ++++++ N ++ G  + +E                           
Sbjct: 261 NSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVL 320

Query: 278 --------------VHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                         +H   ++SG  FD   V N L++ Y KCG ++D+  VF      D 
Sbjct: 321 KSIAALQANYMCRQIHALSLKSGFEFDNYVV-NSLIDTYGKCGHVEDATRVFEESPIVDL 379

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           V + ++++   Q+G  EEA+  +  M+  G+   +F   S L++CASL     G+Q+H  
Sbjct: 380 VLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVH 439

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            LK G  SD+   N+L+++YA  G +      F  +P    VSW+++IG  A       E
Sbjct: 440 ILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLA-QHGYGKE 498

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSM-GKLGHQVHAQVIKYNVANETTIENALL 501
           A++ +  M + G  PN +T +++L A +   +  +  H  ++  I + +         ++
Sbjct: 499 ALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMI 558

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMI-SGYIHNEL 541
              G+ G+++   ++  +M  + + + W +++ +  IH  +
Sbjct: 559 DLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNI 599



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 232/475 (48%), Gaps = 52/475 (10%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S   +  H  ++K G+  D F  N L+++Y +VG L  AS +FDE+   + VSW  I++G
Sbjct: 127 SVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAG 186

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
                  + A ++ +EM ++G   N + L S L+AC   G +  + G Q+H  ++K +  
Sbjct: 187 CVLHEYHHRALELLREMNKSGMCPNMFTLSSALKAC--AGMALRELGRQLHSSLIKMDMG 244

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D  +   LI MY  C  S D AR +F+ +  RD+I+WN++IS +SQ  +      LF  
Sbjct: 245 SDSFLGVGLIDMYSKC-NSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPL 303

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M  EG  +    N+ T  +++ +   + L  +Y+ +QI A+  K+G   D YV ++L+  
Sbjct: 304 MHTEGIGF----NQTTLSTVLKSI--AALQANYMCRQIHALSLKSGFEFDNYVVNSLIDT 357

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGL-------------------MEGR--------- 272
           + + G+   A ++FE+    ++V    L                   M+ R         
Sbjct: 358 YGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVC 417

Query: 273 -------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                         +GK+VH ++++ G    +  GN LVNMYAKCG+I+D+   F  +  
Sbjct: 418 SSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPV 477

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ- 378
           +  VSW+ MI GL Q+G  +EA+  F  M + G+  ++ +L+S L +C   G +   +  
Sbjct: 478 RGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHY 537

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            +   +  G++        ++ L   AG L   +++   MP + + + W +++GA
Sbjct: 538 FNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGA 592



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 232/473 (49%), Gaps = 42/473 (8%)

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G+  + F+  S L +C     ++LG+Q+HG  +  G DSD  V+N+L+ LYA  G     
Sbjct: 5   GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
             +F  +P+   VSWN++   +  S+ +  EAV  + DM  +G  PN  +  +++   + 
Sbjct: 65  RSLFDAIPDRSVVSWNALFSCYVHSD-MHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTG 123

Query: 472 FSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
                 G ++H  +IK    ++    NAL+  Y K G ++D   +F  ++ + D VSWN+
Sbjct: 124 LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIA-KPDIVSWNA 182

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC 591
           +I+G + +E   +A+ L+  M + G   + FT ++ L ACA +A  E G ++H+  ++  
Sbjct: 183 IIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMD 242

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
           +  D  +G  L+DMYSKC  +D A   F LMP R++ +WN++ISG++++   ++A +LF 
Sbjct: 243 MGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFP 302

Query: 652 QMKLDGPLPDHVTFVGVLSACS-----------HAGLVDEGFK----------------- 683
            M  +G   +  T   VL + +           HA  +  GF+                 
Sbjct: 303 LMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCG 362

Query: 684 HFKSMSQVYGLIP--QLEQFSCMVDLLGRAGELDKIEEFINKMP---ITPNSLIWRTVLG 738
           H +  ++V+   P   L  F+ +V    + G+ ++      +M    I P+S +  ++L 
Sbjct: 363 HVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLN 422

Query: 739 ACCRANCRKTELGRKAANMLFE---MEPQNAVNYVLLANMYASGGKWEDVAKA 788
           AC  A+    E G++    + +   M    A N   L NMYA  G  ED + A
Sbjct: 423 AC--ASLSAYEQGKQVHVHILKFGFMSDIFAGNS--LVNMYAKCGSIEDASCA 471



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 120/232 (51%), Gaps = 1/232 (0%)

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M   G   N   F ++L A +      LG QVH  V+     ++  + N+L+  Y KCG 
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
             D   +F  + + R  VSWN++ S Y+H+++  +A++L   M+  G R + F+ +++++
Sbjct: 61  FGDARSLFDAIPD-RSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMIN 119

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
            C  +    +G ++H   ++   + D    +ALVDMY+K G ++ AS  FD +   ++ S
Sbjct: 120 VCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVS 179

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           WN++I+G   H +  +AL L  +M   G  P+  T    L AC+   L + G
Sbjct: 180 WNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELG 231



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 120/277 (43%), Gaps = 38/277 (13%)

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G + + F F +VL AC     L  G +VH   V    + D  + ++LV +Y+KCG    A
Sbjct: 5   GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-- 673
              FD +P R+V SWN++ S Y       +A++LF  M L G  P+  +   +++ C+  
Sbjct: 65  RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGL 124

Query: 674 ---------HAGLVDEGFK----HFKSMSQVYGLIPQLEQFSCMVDLLGR---------- 710
                    H  L+  G+        ++  +Y  +  LE  S + D + +          
Sbjct: 125 EDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAII 184

Query: 711 AG---------ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM 761
           AG          L+ + E +NK  + PN     + L AC     R  ELGR+  + L +M
Sbjct: 185 AGCVLHEYHHRALELLRE-MNKSGMCPNMFTLSSALKACAGMALR--ELGRQLHSSLIKM 241

Query: 762 E-PQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEV 797
           +   ++   V L +MY+     +D     K M E ++
Sbjct: 242 DMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDM 278


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 282/666 (42%), Positives = 419/666 (62%), Gaps = 9/666 (1%)

Query: 275 GKEVHGYLIRSGLFDM-VAVGNGLVNMYAK-CGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           G+ ++G+++++G  +  V VG  L++M+ K  G +  +  VF  M  ++ V+W  MI+  
Sbjct: 165 GEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRF 224

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            Q GC  +AI  F  M   G +   F+  S LS+C  LG + LG+Q+H   ++LGL  DV
Sbjct: 225 AQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDV 284

Query: 393 SVSNALLSLYADA---GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
            V  +L+ +YA     G +    KVF  MPEH+ +SW ++I A+  S     EA++ +  
Sbjct: 285 CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCK 344

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M      PN  +F ++L A  + S    G QV++  +K  +A+   + N+L+S Y + G 
Sbjct: 345 MISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGR 404

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           M+D  K F  + E+ + VS+N+++ GY  N    +A  L   +   G  +  FTFA++LS
Sbjct: 405 MEDARKAFDILFEK-NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLS 463

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
             AS+  + +G ++H   ++   + +  I +AL+ MYS+CG I+ A + F+ M  RNV S
Sbjct: 464 GAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVIS 523

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           W SMI+G+A+HG   +AL +F +M   G  P+ +T+V VLSACSH G++ EG KHF SM 
Sbjct: 524 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 583

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
           + +G++P++E ++CMVDLLGR+G L +  EFIN MP+  ++L+WRT+LGA CR +   TE
Sbjct: 584 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA-CRVH-GNTE 641

Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMK 809
           LGR AA M+ E EP +   Y+LL+N++AS G+W+DV K RK+MKE  + KEAGCSW+ ++
Sbjct: 642 LGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVE 701

Query: 810 DGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSE 869
           + VH F  G+ SHP+   IY++L +L  K+++ GY+P T F L D+E E KE  +  HSE
Sbjct: 702 NRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSE 761

Query: 870 KIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKC 928
           KIAVAF L   S+  PIRI KNLRVCGDCH+A K+IS   GREIV+RDSNRFHH  +G C
Sbjct: 762 KIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVC 821

Query: 929 SCGDYW 934
           SC DYW
Sbjct: 822 SCNDYW 827



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 154/578 (26%), Positives = 279/578 (48%), Gaps = 57/578 (9%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD-RNSVSWACIVSGYT 62
            KL H ++++ G   D  + NTLI++Y + GD  +A  +F+ M + R+ VSW+ +VS + 
Sbjct: 63  GKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFA 122

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-TF 121
           +  M  +A   F +M+  GF  N Y   +V+RAC     +    G  ++  V+K+     
Sbjct: 123 NNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAW--VGEIIYGFVVKTGYLEA 180

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V   LI M+         A ++F+++  R+L++W  +I+ ++Q G       LF  M
Sbjct: 181 DVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDM 240

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           +  G+     P+ +T+ S+++A   + L    L +Q+ + V + GL  D+ VG +LV  +
Sbjct: 241 ELSGY----VPDRFTYSSVLSAC--TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMY 294

Query: 242 ARL---GNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------ 274
           A+    G+   +RK+FEQM + NV+S   ++    +                        
Sbjct: 295 AKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNH 354

Query: 275 ------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                             G++V+ Y ++ G+  +  VGN L++MYA+ G ++D+R  F  
Sbjct: 355 FSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDI 414

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           +  K+ VS+N ++ G  +N   EEA + F  +   G+  S F+  S LS  AS+G +  G
Sbjct: 415 LFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG 474

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +QIHG  LK G  S+  + NAL+S+Y+  G +    +VF  M + + +SW S+I  FA  
Sbjct: 475 EQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA-K 533

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETT 495
               + A++ +  M   G  PN +T++ +L+A S   M   G +    + K + +     
Sbjct: 534 HGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRME 593

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
               ++   G+ G + +  +    M    D + W +++
Sbjct: 594 HYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 631



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 258/476 (54%), Gaps = 23/476 (4%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK-DSVSWNTMISGLD 333
           GK VH  L++SGL     V N L+++Y+KCG  + +R +F  M  K D VSW+ M+S   
Sbjct: 63  GKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFA 122

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG-LDSDV 392
            N    +AI  F  M   G   + +   + + +C++  +  +G+ I+G  +K G L++DV
Sbjct: 123 NNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADV 182

Query: 393 SVSNALLSLYAD-AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
            V   L+ ++   +G L    KVF  MPE + V+W  +I  FA       +A+  +LDM 
Sbjct: 183 CVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQL-GCARDAIDLFLDME 241

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC---G 508
            +G+ P+  T+ ++L+A +   +  LG Q+H++VI+  +A +  +  +L+  Y KC   G
Sbjct: 242 LSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADG 301

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHN-ELLPKAMNLVWFMMQRGQRLDHFTFATV 567
            +DD  K+F +M E  + +SW ++I+ Y+ + E   +A+ L   M+    R +HF+F++V
Sbjct: 302 SVDDSRKVFEQMPE-HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSV 360

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           L AC +++    G +V++  V+  +     +G++L+ MY++ GR++ A + FD++  +N+
Sbjct: 361 LKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNL 420

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            S+N+++ GYA++   ++A  LF+++   G      TF  +LS  +  G + +G      
Sbjct: 421 VSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG------ 474

Query: 688 MSQVYGLIP----QLEQFSC--MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
             Q++G +     +  Q  C  ++ +  R G ++   +  N+M    N + W +++
Sbjct: 475 -EQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMI 528



 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 235/470 (50%), Gaps = 56/470 (11%)

Query: 11  ILKHGF-AYDVFLCNTLINVYVR-VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSN 68
           ++K G+   DV +   LI+++V+  GDL SA K+FD+MP+RN V+W  +++ +   G + 
Sbjct: 172 VVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCAR 231

Query: 69  EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV 128
           +A  +F +M  +G++ +R+   SVL AC E G      G Q+H  V++     D  V   
Sbjct: 232 DAIDLFLDMELSGYVPDRFTYSSVLSACTELGL--LALGKQLHSRVIRLGLALDVCVGCS 289

Query: 129 LIAMYGSCLE--STDCARRIFEEIETRDLISWNSIISVYSQRGD-TISVFKLFSRMQREG 185
           L+ MY  C    S D +R++FE++   +++SW +II+ Y Q G+      +LF +M    
Sbjct: 290 LVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM---- 345

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
               ++PN ++F S++ A  +  LS  Y  +Q+ +   K G+ S   VG++L+S +AR G
Sbjct: 346 ISGHIRPNHFSFSSVLKACGN--LSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSG 403

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRR-------------------------------- 273
               ARK F+ + +KN+VS N +++G                                  
Sbjct: 404 RMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLS 463

Query: 274 ---------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                    KG+++HG L++ G      + N L++MY++CG I+ +  VF  M  ++ +S
Sbjct: 464 GAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVIS 523

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W +MI+G  ++G    A+  F  M   G   +  + ++ LS+C+ +G I  GQ+      
Sbjct: 524 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 583

Query: 385 K-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           K  G+   +     ++ L   +G L   ++    MP   D + W +++GA
Sbjct: 584 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 633



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 210/428 (49%), Gaps = 47/428 (10%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM-PEHD 422
           L SC       LG+ +H + ++ GL+ D  V N L+SLY+  G       +F  M  + D
Sbjct: 51  LKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRD 110

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
            VSW++++  FA++ ++  +A+  +LDM   G+ PN   F  ++ A S+ +   +G  ++
Sbjct: 111 LVSWSAMVSCFANN-SMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIY 169

Query: 483 AQVIKYN-VANETTIENALLSCYGK-CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
             V+K   +  +  +   L+  + K  G++    K+F +M E R+ V+W  MI+ +    
Sbjct: 170 GFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPE-RNLVTWTLMITRFAQLG 228

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
               A++L   M   G   D FT+++VLSAC  +  L  G ++H+  +R  L  DV +G 
Sbjct: 229 CARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGC 288

Query: 601 ALVDMYSKC---GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK-ALTLFSQMKLD 656
           +LVDMY+KC   G +D + + F+ MP  NV SW ++I+ Y + G  DK A+ LF +M   
Sbjct: 289 SLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISG 348

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
              P+H +F  VL AC              ++S  Y                   GE  +
Sbjct: 349 HIRPNHFSFSSVLKACG-------------NLSDPY------------------TGE--Q 375

Query: 717 IEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMY 776
           +  +  K+ I   + +  +++    R+   + E  RKA ++LFE   +N V+Y  + + Y
Sbjct: 376 VYSYAVKLGIASVNCVGNSLISMYARSG--RMEDARKAFDILFE---KNLVSYNAIVDGY 430

Query: 777 ASGGKWED 784
           A   K E+
Sbjct: 431 AKNLKSEE 438



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 151/295 (51%), Gaps = 7/295 (2%)

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M +    P+  T+  +L +   F   +LG  VH ++++  +  ++ + N L+S Y KCG+
Sbjct: 35  MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 94

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
            +    IF  M  +RD VSW++M+S + +N +  +A+     M++ G   + + FA V+ 
Sbjct: 95  TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 154

Query: 570 ACASVATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSK-CGRIDYASRFFDLMPVRNV 627
           AC++      G  ++   V+   LE DV +G  L+DM+ K  G +  A + FD MP RN+
Sbjct: 155 ACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL 214

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            +W  MI+ +A+ G    A+ LF  M+L G +PD  T+  VLSAC+  GL+  G K   S
Sbjct: 215 VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG-KQLHS 273

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRA---GELDKIEEFINKMPITPNSLIWRTVLGA 739
                GL   +     +VD+  +    G +D   +   +MP   N + W  ++ A
Sbjct: 274 RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAIITA 327



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 22/230 (9%)

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
           L  A + +  M Q+    D  T++ +L +C      + G  VH   +++ LE D V+ + 
Sbjct: 25  LHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNT 84

Query: 602 LVDMYSKCGRIDYASRFFDLM-PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           L+ +YSKCG  + A   F+ M   R++ SW++M+S +A +    +A+  F  M   G  P
Sbjct: 85  LISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYP 144

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ---LEQFSC----MVDLLGR-AG 712
           +   F  V+ ACS+A     G         +YG + +   LE   C    ++D+  + +G
Sbjct: 145 NEYCFAAVIRACSNANYAWVG-------EIIYGFVVKTGYLEADVCVGCELIDMFVKGSG 197

Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
           +L    +  +KMP   N + W  ++    +  C      R A ++  +ME
Sbjct: 198 DLGSAYKVFDKMP-ERNLVTWTLMITRFAQLGC-----ARDAIDLFLDME 241


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  550 bits (1418), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 282/666 (42%), Positives = 419/666 (62%), Gaps = 9/666 (1%)

Query: 275 GKEVHGYLIRSGLFDM-VAVGNGLVNMYAK-CGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           G+ ++G+++++G  +  V VG  L++M+ K  G +  +  VF  M  ++ V+W  MI+  
Sbjct: 147 GEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRF 206

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            Q GC  +AI  F  M   G +   F+  S LS+C  LG + LG+Q+H   ++LGL  DV
Sbjct: 207 AQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDV 266

Query: 393 SVSNALLSLYADA---GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
            V  +L+ +YA     G +    KVF  MPEH+ +SW ++I A+  S     EA++ +  
Sbjct: 267 CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCK 326

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M      PN  +F ++L A  + S    G QV++  +K  +A+   + N+L+S Y + G 
Sbjct: 327 MISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGR 386

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           M+D  K F  + E+ + VS+N+++ GY  N    +A  L   +   G  +  FTFA++LS
Sbjct: 387 MEDARKAFDILFEK-NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLS 445

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
             AS+  + +G ++H   ++   + +  I +AL+ MYS+CG I+ A + F+ M  RNV S
Sbjct: 446 GAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVIS 505

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           W SMI+G+A+HG   +AL +F +M   G  P+ +T+V VLSACSH G++ EG KHF SM 
Sbjct: 506 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 565

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
           + +G++P++E ++CMVDLLGR+G L +  EFIN MP+  ++L+WRT+LGA CR +   TE
Sbjct: 566 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA-CRVH-GNTE 623

Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMK 809
           LGR AA M+ E EP +   Y+LL+N++AS G+W+DV K RK+MKE  + KEAGCSW+ ++
Sbjct: 624 LGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVE 683

Query: 810 DGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSE 869
           + VH F  G+ SHP+   IY++L +L  K+++ GY+P T F L D+E E KE  +  HSE
Sbjct: 684 NRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSE 743

Query: 870 KIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKC 928
           KIAVAF L   S+  PIRI KNLRVCGDCH+A K+IS   GREIV+RDSNRFHH  +G C
Sbjct: 744 KIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVC 803

Query: 929 SCGDYW 934
           SC DYW
Sbjct: 804 SCNDYW 809



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 154/577 (26%), Positives = 279/577 (48%), Gaps = 57/577 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD-RNSVSWACIVSGYTH 63
           KL H ++++ G   D  + NTLI++Y + GD  +A  +F+ M + R+ VSW+ +VS + +
Sbjct: 46  KLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFAN 105

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-TFD 122
             M  +A   F +M+  GF  N Y   +V+RAC     +    G  ++  V+K+     D
Sbjct: 106 NSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAW--VGEIIYGFVVKTGYLEAD 163

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V   LI M+         A ++F+++  R+L++W  +I+ ++Q G       LF  M+
Sbjct: 164 VCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDME 223

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             G+     P+ +T+ S+++A   + L    L +Q+ + V + GL  D+ VG +LV  +A
Sbjct: 224 LSGY----VPDRFTYSSVLSAC--TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYA 277

Query: 243 RL---GNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------- 274
           +    G+   +RK+FEQM + NV+S   ++    +                         
Sbjct: 278 KCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHF 337

Query: 275 -----------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                            G++V+ Y ++ G+  +  VGN L++MYA+ G ++D+R  F  +
Sbjct: 338 SFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL 397

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             K+ VS+N ++ G  +N   EEA + F  +   G+  S F+  S LS  AS+G +  G+
Sbjct: 398 FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGE 457

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           QIHG  LK G  S+  + NAL+S+Y+  G +    +VF  M + + +SW S+I  FA   
Sbjct: 458 QIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA-KH 516

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTI 496
              + A++ +  M   G  PN +T++ +L+A S   M   G +    + K + +      
Sbjct: 517 GFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEH 576

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
              ++   G+ G + +  +    M    D + W +++
Sbjct: 577 YACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 613



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 258/476 (54%), Gaps = 23/476 (4%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK-DSVSWNTMISGLD 333
           GK VH  L++SGL     V N L+++Y+KCG  + +R +F  M  K D VSW+ M+S   
Sbjct: 45  GKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFA 104

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG-LDSDV 392
            N    +AI  F  M   G   + +   + + +C++  +  +G+ I+G  +K G L++DV
Sbjct: 105 NNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADV 164

Query: 393 SVSNALLSLYAD-AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
            V   L+ ++   +G L    KVF  MPE + V+W  +I  FA       +A+  +LDM 
Sbjct: 165 CVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQL-GCARDAIDLFLDME 223

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC---G 508
            +G+ P+  T+ ++L+A +   +  LG Q+H++VI+  +A +  +  +L+  Y KC   G
Sbjct: 224 LSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADG 283

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHN-ELLPKAMNLVWFMMQRGQRLDHFTFATV 567
            +DD  K+F +M E  + +SW ++I+ Y+ + E   +A+ L   M+    R +HF+F++V
Sbjct: 284 SVDDSRKVFEQMPE-HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSV 342

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           L AC +++    G +V++  V+  +     +G++L+ MY++ GR++ A + FD++  +N+
Sbjct: 343 LKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNL 402

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            S+N+++ GYA++   ++A  LF+++   G      TF  +LS  +  G + +G      
Sbjct: 403 VSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG------ 456

Query: 688 MSQVYGLIP----QLEQFSC--MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
             Q++G +     +  Q  C  ++ +  R G ++   +  N+M    N + W +++
Sbjct: 457 -EQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMI 510



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 235/470 (50%), Gaps = 56/470 (11%)

Query: 11  ILKHGF-AYDVFLCNTLINVYVR-VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSN 68
           ++K G+   DV +   LI+++V+  GDL SA K+FD+MP+RN V+W  +++ +   G + 
Sbjct: 154 VVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCAR 213

Query: 69  EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV 128
           +A  +F +M  +G++ +R+   SVL AC E G      G Q+H  V++     D  V   
Sbjct: 214 DAIDLFLDMELSGYVPDRFTYSSVLSACTELGL--LALGKQLHSRVIRLGLALDVCVGCS 271

Query: 129 LIAMYGSCLE--STDCARRIFEEIETRDLISWNSIISVYSQRGD-TISVFKLFSRMQREG 185
           L+ MY  C    S D +R++FE++   +++SW +II+ Y Q G+      +LF +M    
Sbjct: 272 LVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM---- 327

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
               ++PN ++F S++ A  +  LS  Y  +Q+ +   K G+ S   VG++L+S +AR G
Sbjct: 328 ISGHIRPNHFSFSSVLKACGN--LSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSG 385

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRR-------------------------------- 273
               ARK F+ + +KN+VS N +++G                                  
Sbjct: 386 RMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLS 445

Query: 274 ---------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                    KG+++HG L++ G      + N L++MY++CG I+ +  VF  M  ++ +S
Sbjct: 446 GAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVIS 505

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W +MI+G  ++G    A+  F  M   G   +  + ++ LS+C+ +G I  GQ+      
Sbjct: 506 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 565

Query: 385 K-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           K  G+   +     ++ L   +G L   ++    MP   D + W +++GA
Sbjct: 566 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 615



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 210/428 (49%), Gaps = 47/428 (10%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM-PEHD 422
           L SC       LG+ +H + ++ GL+ D  V N L+SLY+  G       +F  M  + D
Sbjct: 33  LKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRD 92

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
            VSW++++  FA++ ++  +A+  +LDM   G+ PN   F  ++ A S+ +   +G  ++
Sbjct: 93  LVSWSAMVSCFANN-SMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIY 151

Query: 483 AQVIKYN-VANETTIENALLSCYGK-CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
             V+K   +  +  +   L+  + K  G++    K+F +M E R+ V+W  MI+ +    
Sbjct: 152 GFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPE-RNLVTWTLMITRFAQLG 210

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
               A++L   M   G   D FT+++VLSAC  +  L  G ++H+  +R  L  DV +G 
Sbjct: 211 CARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGC 270

Query: 601 ALVDMYSKC---GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK-ALTLFSQMKLD 656
           +LVDMY+KC   G +D + + F+ MP  NV SW ++I+ Y + G  DK A+ LF +M   
Sbjct: 271 SLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISG 330

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
              P+H +F  VL AC              ++S  Y                   GE  +
Sbjct: 331 HIRPNHFSFSSVLKACG-------------NLSDPY------------------TGE--Q 357

Query: 717 IEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMY 776
           +  +  K+ I   + +  +++    R+   + E  RKA ++LFE   +N V+Y  + + Y
Sbjct: 358 VYSYAVKLGIASVNCVGNSLISMYARSG--RMEDARKAFDILFE---KNLVSYNAIVDGY 412

Query: 777 ASGGKWED 784
           A   K E+
Sbjct: 413 AKNLKSEE 420



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 151/295 (51%), Gaps = 7/295 (2%)

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M +    P+  T+  +L +   F   +LG  VH ++++  +  ++ + N L+S Y KCG+
Sbjct: 17  MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 76

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
            +    IF  M  +RD VSW++M+S + +N +  +A+     M++ G   + + FA V+ 
Sbjct: 77  TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 136

Query: 570 ACASVATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSK-CGRIDYASRFFDLMPVRNV 627
           AC++      G  ++   V+   LE DV +G  L+DM+ K  G +  A + FD MP RN+
Sbjct: 137 ACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL 196

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            +W  MI+ +A+ G    A+ LF  M+L G +PD  T+  VLSAC+  GL+  G K   S
Sbjct: 197 VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG-KQLHS 255

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRA---GELDKIEEFINKMPITPNSLIWRTVLGA 739
                GL   +     +VD+  +    G +D   +   +MP   N + W  ++ A
Sbjct: 256 RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAIITA 309



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 22/230 (9%)

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
           L  A + +  M Q+    D  T++ +L +C      + G  VH   +++ LE D V+ + 
Sbjct: 7   LHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNT 66

Query: 602 LVDMYSKCGRIDYASRFFDLM-PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           L+ +YSKCG  + A   F+ M   R++ SW++M+S +A +    +A+  F  M   G  P
Sbjct: 67  LISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYP 126

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ---LEQFSC----MVDLLGR-AG 712
           +   F  V+ ACS+A     G         +YG + +   LE   C    ++D+  + +G
Sbjct: 127 NEYCFAAVIRACSNANYAWVG-------EIIYGFVVKTGYLEADVCVGCELIDMFVKGSG 179

Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
           +L    +  +KMP   N + W  ++    +  C      R A ++  +ME
Sbjct: 180 DLGSAYKVFDKMP-ERNLVTWTLMITRFAQLGC-----ARDAIDLFLDME 223


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 304/892 (34%), Positives = 496/892 (55%), Gaps = 57/892 (6%)

Query: 89  LGSVLRAC--QECGPSGFKFGMQ--VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCAR 144
           LGSV  AC  +EC  S   + +   +H   +      D +  N+LI +Y         AR
Sbjct: 39  LGSVDFACALRECRGSVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAK-KGLVQRAR 97

Query: 145 RIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA 204
           R+FE++  RD +SW +++S Y++ G       L+ +M   G    + P  Y   S+++A 
Sbjct: 98  RVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSG----VVPTPYVLSSVLSAC 153

Query: 205 YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS 264
             + L     L  + A V K G  S+  VG+AL++ + R G+   A ++F +M   + V+
Sbjct: 154 TKAALFEQGRL--VHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVT 211

Query: 265 MNGLMEGR-----------------------------------------RKGKEVHGYLI 283
            N L+                                             KGK++H YL+
Sbjct: 212 FNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLL 271

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
           ++G+     +   L+++Y KCG I ++  +F+     + V WN M+    Q     ++  
Sbjct: 272 KAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFD 331

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            FC M   G+  + F+    L +C   G I LG+QIH   +K G +SD+ VS  L+ +Y+
Sbjct: 332 LFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYS 391

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
             G+L +  ++  ++   D VSW S+I  +   E    EA++ + DM+  G  P+ +   
Sbjct: 392 KYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHE-FCKEALETFKDMQLFGIWPDNIGLA 450

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           + ++A +     + G Q+H++V     + + +I NAL++ Y +CG   +   +F  + E 
Sbjct: 451 SAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAI-EH 509

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
           +D+++WN M+SG+  + L  +A+ +   M Q G + + FTF + +SA A++A +++G ++
Sbjct: 510 KDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQI 569

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           HA  ++     +  + +AL+ +Y KCG I+ A   F  M  RN  SWN++I+  ++HG G
Sbjct: 570 HATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWG 629

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC 703
            +AL LF QMK +G  P+ VTF+GVL+ACSH GLV+EG  +FKSMS  +G+ P+ + ++C
Sbjct: 630 LEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYAC 689

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP 763
           +VD+LGRAG+LD+  +F+ +MP++ N+++WRT+L A CR + +  E+G  AA  L E+EP
Sbjct: 690 VVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSA-CRVH-KNIEIGELAAKYLLELEP 747

Query: 764 QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHP 823
            ++ +YVLL+N YA  GKW      RK MK+  V+KE G SW+ +K+ VH F  GD  HP
Sbjct: 748 HDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHP 807

Query: 824 EKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSK 882
               IY+ L +L+ ++   GY+    F   + E E K+     HSEK+AVAF +++    
Sbjct: 808 LAHQIYKYLADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPS 867

Query: 883 LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +P+R++KNLRVC DCH+  KF S+++GREIVLRD  RFHHFN+G CSCGD+W
Sbjct: 868 MPLRVIKNLRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919



 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 204/688 (29%), Positives = 342/688 (49%), Gaps = 74/688 (10%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           + H + +  G   D    N LI++Y + G +  A ++F+++  R++VSW  ++SGY   G
Sbjct: 63  VIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNG 122

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
           +  EA  ++ +M  +G +   Y L SVL AC +     F+ G  VH  V K     + +V
Sbjct: 123 LGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAAL--FEQGRLVHAQVYKQGSCSETVV 180

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
            N LIA+Y     S   A R+F E+   D +++N++IS ++Q G+  S  ++F  M+  G
Sbjct: 181 GNALIALYLR-FGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSG 239

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
           +     P+  T  SL+ A  S  +      +Q+ + + KAG+  D  +  +L+  + + G
Sbjct: 240 W----TPDCVTIASLLAACAS--IGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCG 293

Query: 246 NFYYARKIFEQMIQKNVVSMNGLM---------------------EGRRK---------- 274
               A +IF+   + NVV  N ++                      G R           
Sbjct: 294 VIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLR 353

Query: 275 ----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                     G+++H   I++G    + V   L++MY+K G +D +R +   +  KD VS
Sbjct: 354 TCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVS 413

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W +MI+G  Q+   +EA+  F  M+  G+   N  L S +S+CA +  +  GQQIH    
Sbjct: 414 WTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVY 473

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
             G  +DVS+ NAL++LYA  G       +F  +   D+++WN ++  FA S  L  EA+
Sbjct: 474 VSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQS-GLYEEAL 532

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
           + ++ M +AG   N  TF++ ++A+++ +  K G Q+HA VIK    +ET + NAL+S Y
Sbjct: 533 EVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLY 592

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
           GKCG ++D +  F  MSE R+ VSWN++I+    +    +A++L   M Q G + +  TF
Sbjct: 593 GKCGSIEDAKMQFFEMSE-RNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTF 651

Query: 565 ATVLSACASVATLERGM-------EVHACGVR----ACLEFDVVIGSALVDMYSKCGRID 613
             VL+AC+ V  +E G+         H    R    AC          +VD+  + G++D
Sbjct: 652 IGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYAC----------VVDILGRAGQLD 701

Query: 614 YASRFFDLMPVR-NVYSWNSMISGYARH 640
            A +F + MPV  N   W +++S    H
Sbjct: 702 RARKFVEEMPVSANAMVWRTLLSACRVH 729



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 167/586 (28%), Positives = 282/586 (48%), Gaps = 72/586 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +L H Q+ K G   +  + N LI +Y+R G L+ A ++F EMP  + V++  ++S +
Sbjct: 160 EQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRH 219

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G    A ++F+EM  +G+  +   + S+L AC   G      G Q+H  +LK+  + 
Sbjct: 220 AQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGD--LNKGKQLHSYLLKAGMSP 277

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D ++   L+ +Y  C    + A  IF+  +  +++ WN ++  Y Q  D    F LF +M
Sbjct: 278 DYIIEGSLLDLYVKCGVIVE-ALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQM 336

Query: 182 QREGFRYSLKPNEYTFGSLI-TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
              G R    PNE+T+  L+ T  Y+  ++   L +QI  +  K G  SD+YV   L+  
Sbjct: 337 VAAGVR----PNEFTYPCLLRTCTYAGEIN---LGEQIHLLSIKTGFESDMYVSGVLIDM 389

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG----------------------------- 271
           +++ G    AR+I E +  K+VVS   ++ G                             
Sbjct: 390 YSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGL 449

Query: 272 ------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                        R+G+++H  +  SG    V++ N LVN+YA+CG   ++ S+F  +  
Sbjct: 450 ASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEH 509

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           KD ++WN M+SG  Q+G YEEA+  F  M + G+  + F+ +S++S+ A+L  I  G+QI
Sbjct: 510 KDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQI 569

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           H   +K G  S+  V+NAL+SLY   G +      FF M E + VSWN++I +       
Sbjct: 570 HATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITS-CSQHGW 628

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG----------HQVHAQVIKYN 489
             EA+  +  M++ G  PN VTFI +LAA S   + + G          H +H +   Y 
Sbjct: 629 GLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHY- 687

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
                     ++   G+ G++D   K    M    + + W +++S 
Sbjct: 688 --------ACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSA 725


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 286/761 (37%), Positives = 448/761 (58%), Gaps = 46/761 (6%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK- 274
           +Q+   + + G+  ++Y+ + L+  +   G+   AR++F++   K+VVS N ++ G    
Sbjct: 64  KQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHR 123

Query: 275 ----------------------------------------GKEVHGYLIRSGLFDMVAVG 294
                                                   G+EVH  ++ +GL +   VG
Sbjct: 124 GLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVG 183

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           N L++MYAKCG++ D+R VF  M  +D VSW T+     ++G  +E++  + AM ++G+ 
Sbjct: 184 NALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVR 243

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
            S  + ++ LS+C SL  +  G+QIH + ++    SDV VS AL  +Y   G +    +V
Sbjct: 244 PSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREV 303

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  +P  D ++WN++IG   DS  L  EA   +  M +   +P+ VT++ IL+A +    
Sbjct: 304 FECLPNRDVIAWNTMIGGLVDSGQL-EEAHGMFHRMLKECVAPDRVTYLAILSACARPGG 362

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
              G ++HA+ +K  + ++    NAL++ Y K G M D  ++F RM  +RD VSW +++ 
Sbjct: 363 LACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTALVG 421

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           GY     + ++ +    M+Q+G   +  T+  VL AC++   L+ G E+HA  V+A +  
Sbjct: 422 GYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFA 481

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           D+ + +AL+ MY KCG ++ A R  + M  R+V +WN++I G A++G G +AL  F  MK
Sbjct: 482 DLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMK 541

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
            +   P+  TFV V+SAC    LV+EG + F SM + YG++P  + ++CMVD+L RAG L
Sbjct: 542 SEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHL 601

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
            + E+ I  MP  P++ +W  +L A CRA+    E+G +AA    ++EPQNA  YV L+ 
Sbjct: 602 GEAEDVILTMPFKPSAAMWGALLAA-CRAH-GNVEIGEQAAEQCLKLEPQNAGTYVSLSF 659

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           +YA+ G W DVAK RK MKE  VKKE G SW+ +   VH FVAGD+SHP  + IY +L+ 
Sbjct: 660 IYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEA 719

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRV 893
           L ++++  GYVP T+F + DL+ E KE  V +HSEK+A+A+ +++   + PIR+ KNLRV
Sbjct: 720 LTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRV 779

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           C DCH+A KFISKI GREI+ RD++RFHHF +G+CSCGDYW
Sbjct: 780 CTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820



 Score =  270 bits (689), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 158/496 (31%), Positives = 268/496 (54%), Gaps = 5/496 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK+VH +++R G+   V + N L+ +Y  CG+++++R +F     K  VSWN MISG   
Sbjct: 63  GKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAH 122

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G  +EA   F  M+++GL    F+ +S LS+C+S   +  G+++H   ++ GL ++ +V
Sbjct: 123 RGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATV 182

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            NAL+S+YA  G +    +VF  M   D+VSW ++ GA+A+S     E++K Y  M + G
Sbjct: 183 GNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAES-GYAQESLKTYHAMLQEG 241

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             P+ +T++N+L+A  S +  + G Q+HAQ+++    ++  +  AL   Y KCG + D  
Sbjct: 242 VRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAR 301

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           ++F  +   RD ++WN+MI G + +  L +A  +   M++     D  T+  +LSACA  
Sbjct: 302 EVFECLPN-RDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARP 360

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
             L  G E+HA  V+  L  DV  G+AL++MYSK G +  A + FD MP R+V SW +++
Sbjct: 361 GGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALV 420

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
            GYA  G   ++ + F +M   G   + +T++ VL ACS+   +  G K   +     G+
Sbjct: 421 GGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWG-KEIHAEVVKAGI 479

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
              L   + ++ +  + G ++        M  T + + W T++G   + N R  E  +K 
Sbjct: 480 FADLAVANALMSMYFKCGSVEDAIRVSEGMS-TRDVVTWNTLIGGLAQ-NGRGLEALQKF 537

Query: 755 ANMLFEMEPQNAVNYV 770
             M  E    NA  +V
Sbjct: 538 EVMKSEEMRPNATTFV 553



 Score =  256 bits (653), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 156/573 (27%), Positives = 286/573 (49%), Gaps = 52/573 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  IL+ G   +V++ NTL+ +YV  G +  A +LFD+  +++ VSW  ++SGY H+
Sbjct: 64  KQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHR 123

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G+  EA  +F  M + G   +++   S+L AC    P+   +G +VH  V+++    +  
Sbjct: 124 GLGQEAFNLFTLMQQEGLEPDKFTFVSILSACS--SPAALNWGREVHVRVMEAGLANNAT 181

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V N LI+MY  C    D ARR+F+ + +RD +SW ++   Y++ G      K +  M +E
Sbjct: 182 VGNALISMYAKCGSVRD-ARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQE 240

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G R    P+  T+ ++++A  S  L+     +QI A + ++   SD+ V +AL   + + 
Sbjct: 241 GVR----PSRITYMNVLSACGS--LAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKC 294

Query: 245 GNFYYARKIFEQMIQKNVVSMN----GLME------------------------------ 270
           G    AR++FE +  ++V++ N    GL++                              
Sbjct: 295 GAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAIL 354

Query: 271 -------GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                  G   GKE+H   ++ GL   V  GN L+NMY+K G++ D+R VF  M  +D V
Sbjct: 355 SACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVV 414

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SW  ++ G    G   E+   F  M + G+ ++  + +  L +C++   +  G++IH E 
Sbjct: 415 SWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEV 474

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           +K G+ +D++V+NAL+S+Y   G +   ++V   M   D V+WN++IG  A +   + EA
Sbjct: 475 VKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGL-EA 533

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLS 502
           ++ +  M+     PN  TF+N+++A    ++ + G +  A + K Y +         ++ 
Sbjct: 534 LQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVD 593

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
              + G + + E +   M  +     W ++++ 
Sbjct: 594 ILARAGHLGEAEDVILTMPFKPSAAMWGALLAA 626



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 208/391 (53%), Gaps = 4/391 (1%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           + + G    ++  +  L SC     + +G+Q+H   L+ G+  +V + N LL LY   G 
Sbjct: 35  LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGS 94

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           ++   ++F        VSWN +I  +A    L  EA   +  M++ G  P+  TF++IL+
Sbjct: 95  VNEARRLFDKFSNKSVVSWNVMISGYAH-RGLGQEAFNLFTLMQQEGLEPDKFTFVSILS 153

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
           A SS +    G +VH +V++  +AN  T+ NAL+S Y KCG + D  ++F  M+  RDEV
Sbjct: 154 ACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMAS-RDEV 212

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           SW ++   Y  +    +++     M+Q G R    T+  VLSAC S+A LE+G ++HA  
Sbjct: 213 SWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQI 272

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
           V +    DV + +AL  MY KCG +  A   F+ +P R+V +WN+MI G    G  ++A 
Sbjct: 273 VESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAH 332

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDL 707
            +F +M  +   PD VT++ +LSAC+  G +  G K   + +   GL+  +   + ++++
Sbjct: 333 GMFHRMLKECVAPDRVTYLAILSACARPGGLACG-KEIHARAVKDGLVSDVRFGNALINM 391

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
             +AG +    +  ++MP   + + W  ++G
Sbjct: 392 YSKAGSMKDARQVFDRMP-KRDVVSWTALVG 421



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 6/218 (2%)

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
           R   V  +SMI         P   +++ ++ Q+G ++D + +  +L +C     L  G +
Sbjct: 8   RWSRVDKSSMIPTSTDGWYAPA--DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQ 65

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
           VH   +R  ++ +V I + L+ +Y  CG ++ A R FD    ++V SWN MISGYA  G 
Sbjct: 66  VHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGL 125

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYGLIPQLEQF 701
           G +A  LF+ M+ +G  PD  TFV +LSACS    ++ G + H + M    GL       
Sbjct: 126 GQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEA--GLANNATVG 183

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           + ++ +  + G +       + M  + + + W T+ GA
Sbjct: 184 NALISMYAKCGSVRDARRVFDAMA-SRDEVSWTTLTGA 220


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 316/932 (33%), Positives = 502/932 (53%), Gaps = 56/932 (6%)

Query: 46  MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFK 105
           M  R + S+   ++G+       +   +F    R   +L        LRAC+  G   + 
Sbjct: 1   MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRR-WP 59

Query: 106 FGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY 165
              ++H   +    +   ++ N+LI +Y         ARR+FEE+  RD +SW +++S Y
Sbjct: 60  LVPEIHAKAIICGLSGYRIIGNLLIDLYAK-KGFVRRARRVFEELSVRDNVSWVAVLSGY 118

Query: 166 SQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKA 225
           +Q G      +L+  M R G    + P  Y   S+++A   + L    L + I   V K 
Sbjct: 119 AQNGLGEEAVRLYREMHRSG----VVPTPYVLSSILSACTKTELF--QLGRLIHVQVYKQ 172

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------- 272
           G  S+ +VG+AL+S + R  +F  A ++F  M+  + V+ N L+ G              
Sbjct: 173 GFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIF 232

Query: 273 ----------------------------RKGKEVHGYLIRSGL-FDMVAVGNGLVNMYAK 303
                                       RKGK++H YL+++G+  D +  G+ L+++Y K
Sbjct: 233 DEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGS-LLDLYVK 291

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
            G I+++  +F      + V WN M+    Q     ++   F  M   G+  + F+    
Sbjct: 292 SGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCM 351

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L +C   G I LG+QIH   +K G  SD+ VS  L+ +Y+  G+L +  ++  ++ E D 
Sbjct: 352 LRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDV 411

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSW S+I  +   E    EA++ + +M+  G  P+ +   + ++A +       G Q+HA
Sbjct: 412 VSWTSMIAGYVQHE-FCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHA 470

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
           +V     + + +I N L+  Y +CG   +    F  + E ++ ++WN +ISG+  + L  
Sbjct: 471 RVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAI-EHKEGITWNGLISGFAQSGLYE 529

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +A+ +   M Q G + + FTF + +SA A++A +++G ++HA  ++     +  I +AL+
Sbjct: 530 EALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALI 589

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
            +Y KCG I+ A   F  M  RN  SWN++I+  ++HG G +AL LF QMK  G  P  V
Sbjct: 590 SLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDV 649

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TFVGVL+ACSH GLV+EG  +FKSMS  +G+ P+ + ++C+VD+LGRAG+LD+ + F+ +
Sbjct: 650 TFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEE 709

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           MPI  +S++WRT+L AC     +  E+G  AA  L E+EP ++ +YVLL+N YA  GKW 
Sbjct: 710 MPIPADSMVWRTLLSAC--KVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWA 767

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
              + RK MK+  V+KE G SW+ +K+ VH F  GD  HP  D IY  L  LN ++   G
Sbjct: 768 SRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIG 827

Query: 844 YVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFK 902
           Y  +      + E E K+     HSEK+AVAF +++  S +P+R++KNLRVC DCH+  K
Sbjct: 828 YKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCNDCHTWMK 887

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           F S ++GREIVLRD  RFHHFN+G CSCGDYW
Sbjct: 888 FTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919



 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 199/670 (29%), Positives = 334/670 (49%), Gaps = 74/670 (11%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N LI++Y + G +  A ++F+E+  R++VSW  ++SGY   G+  EA ++++EM R+G +
Sbjct: 81  NLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVV 140

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
              Y L S+L AC +     F+ G  +H  V K     +  V N LI++Y  C  S   A
Sbjct: 141 PTPYVLSSILSACTK--TELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRC-RSFRLA 197

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
            R+F ++   D +++N++IS ++Q G       +F  MQ  G    L P+  T  SL+ A
Sbjct: 198 DRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSG----LSPDSVTIASLLAA 253

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
              S +      +Q+ + + KAG+  D  +  +L+  + + G+   A +IF+   + NVV
Sbjct: 254 C--SAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVV 311

Query: 264 SMNGLM---------------------EGRRK--------------------GKEVHGYL 282
             N ++                      G R                     G+++H   
Sbjct: 312 LWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLT 371

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
           I++G    + V   L++MY+K G +D ++ +   +  KD VSW +MI+G  Q+   +EA+
Sbjct: 372 IKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEAL 431

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
             F  M+  G+   N  L S +S+CA +  +  G QIH      G  +DVS+ N L+ LY
Sbjct: 432 ETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLY 491

Query: 403 ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
           A  G        F  +   + ++WN +I  FA S  L  EA+K ++ M +AG   N  TF
Sbjct: 492 ARCGISKEAFSSFEAIEHKEGITWNGLISGFAQS-GLYEEALKVFMKMDQAGAKYNVFTF 550

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
           ++ ++A+++ +  K G Q+HA+VIK    +ET I NAL+S YGKCG ++D +  F  M+ 
Sbjct: 551 VSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMT- 609

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM- 581
           +R+EVSWN++I+    +    +A++L   M Q+G +    TF  VL+AC+ V  +E G+ 
Sbjct: 610 KRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLC 669

Query: 582 ------EVHACGVR----ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSW 630
                   H    R    AC          +VD+  + G++D A RF + MP+  +   W
Sbjct: 670 YFKSMSNEHGIHPRPDHYAC----------VVDILGRAGQLDRAKRFVEEMPIPADSMVW 719

Query: 631 NSMISGYARH 640
            +++S    H
Sbjct: 720 RTLLSACKVH 729



 Score =  233 bits (594), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 159/592 (26%), Positives = 283/592 (47%), Gaps = 75/592 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +L H+Q+ K GF  + F+ N LI++Y+R      A ++F +M   +SV++  ++SG+  
Sbjct: 162 GRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQ 221

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G  + A  +F EM  +G   +   + S+L AC   G    + G Q+H  +LK+  + D 
Sbjct: 222 CGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGD--LRKGKQLHSYLLKAGMSLDY 279

Query: 124 LVSNVLIAMYGSCLESTDC--ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           ++   L+ +Y   ++S D   A +IF+  +  +++ WN ++  Y Q  D    F +F RM
Sbjct: 280 IMEGSLLDLY---VKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRM 336

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
              G R    PN++T+  ++     +   G  L +QI ++  K G  SD+YV   L+  +
Sbjct: 337 LAAGVR----PNKFTYPCMLRTCTHTGEIG--LGEQIHSLTIKNGFQSDMYVSGVLIDMY 390

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------------------------- 272
           ++ G    A++I + + +K+VVS   ++ G                              
Sbjct: 391 SKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLA 450

Query: 273 ------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                        +G ++H  +  SG    V++ NGLV +YA+CG   ++ S F  +  K
Sbjct: 451 SAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHK 510

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           + ++WN +ISG  Q+G YEEA+  F  M + G   + F+ +S++S+ A+L  I  G+QIH
Sbjct: 511 EGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIH 570

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
              +K G  S+  +SNAL+SLY   G +      FF M + ++VSWN++I          
Sbjct: 571 ARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITC-CSQHGRG 629

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG----------HQVHAQVIKYNV 490
            EA+  +  M++ G  P+ VTF+ +L A S   + + G          H +H +   Y  
Sbjct: 630 LEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHY-- 687

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
                    ++   G+ G++D  ++    M    D + W +++S   +H  L
Sbjct: 688 -------ACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNL 732



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 218/479 (45%), Gaps = 62/479 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  +LK G + D  +  +L+++YV+ GD+  A ++FD     N V W  ++  Y
Sbjct: 261 RKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAY 320

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                  ++  +F  M+ AG   N++    +LR C   G  G   G Q+H L +K+    
Sbjct: 321 GQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIG--LGEQIHSLTIKNGFQS 378

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  VS VLI MY S     D A+RI + IE +D++SW S+I+ Y Q        + F  M
Sbjct: 379 DMYVSGVLIDMY-SKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEM 437

Query: 182 QREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           Q  G    + P+     S I+  A   +V  GS    QI A V  +G  +D+ + + LV 
Sbjct: 438 QACG----IWPDNIGLASAISACAGIKAVHQGS----QIHARVYVSGYSADVSIWNGLVY 489

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------------------------- 271
            +AR G    A   FE +  K  ++ NGL+ G                            
Sbjct: 490 LYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFT 549

Query: 272 -------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                         ++GK++H  +I++G      + N L+++Y KCG+I+D++  F  M 
Sbjct: 550 FVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMT 609

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-- 376
            ++ VSWNT+I+   Q+G   EA+  F  M++ GL  S+ + +  L++C+ +G +  G  
Sbjct: 610 KRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLC 669

Query: 377 --QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
             + +  E    G+         ++ +   AG L R  +    MP   D + W +++ A
Sbjct: 670 YFKSMSNEH---GIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSA 725


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 318/954 (33%), Positives = 508/954 (53%), Gaps = 61/954 (6%)

Query: 29  VYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYA 88
           +Y +   +  A  +FD +  +N  SW  +++ Y+  G   EA ++F  M   G   ++  
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE 148
               L AC   G      G Q+H  V+ S  T + ++SN L+ MYG C +   CA ++F+
Sbjct: 61  FVIALDACAASGE--LDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKC-QDVPCAEKVFD 117

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
            +  RD++SW ++++VY+Q G      +  SRM  EG    +KPN+ TF +++       
Sbjct: 118 GMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEG----VKPNQVTFVTIVDVCAKLR 173

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV----- 263
           L    L ++I   +   GL  D  +G+ALV  +   G+F   + +F +M Q +V+     
Sbjct: 174 LLD--LGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTM 231

Query: 264 ----SMNGLME--------------------------------GRRKGKEVHGYLIRSGL 287
               S NG  E                                  ++G+ +   ++ S  
Sbjct: 232 IAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPF 291

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
                +   L+++Y +CG +D ++ +   M  +D V+WN M++   QNG   EAI     
Sbjct: 292 CSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRR 351

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL-DSDVSVSNALLSLYADAG 406
           M  +G  ++  + +S L +CA+L  +  G++IH   L  GL   +V+V N+++++Y   G
Sbjct: 352 MDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCG 411

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
                + VF  MP  D VSWN+VI A   +     +A++ +  M   G   N  T +++L
Sbjct: 412 QTEAAMSVFEAMPRKDDVSWNAVINASVGNSKF-QDALELFHGMELEGLRSNEFTLLSLL 470

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVA-NETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
            A       KL  Q+HA+        N T + N++++ Y +CG + D +K F  + E + 
Sbjct: 471 EACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSL-EEKG 529

Query: 526 EVSWNSMISGYIHNELLP--KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
            V+W+ +++ Y  ++  P  +A      M   G +    TF + L ACA++ATLE G  +
Sbjct: 530 LVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSM 589

Query: 584 HA-CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
           H        +E  +V+G+ +++MY KCG    A   FD MP + + SWNS+I  YA +GH
Sbjct: 590 HRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGH 649

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
             +AL+   +M L G  PD  T V +L   SHAGL++ G +HF+S  Q +GL P   Q  
Sbjct: 650 ALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLK 709

Query: 703 CMVDLLGRAGELDKIEEFINKMPI-TPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM 761
           C+VDLL R G LD  EE I   P    +++ W T+L AC   +    + G + A  +FE+
Sbjct: 710 CLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAAC--KSYGDPQRGIRCAERVFEL 767

Query: 762 EPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDES 821
           EPQ++ ++V+LAN+YAS G+W D ++ RK M+   VKKE GCSW+ +   VH F++G+  
Sbjct: 768 EPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESK 827

Query: 822 HPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRN 880
           HP+   I E L++L  +MR+AGYVP T   + D+E   KE+++S HSE++A+ F +++  
Sbjct: 828 HPKIREICEDLEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTR 887

Query: 881 SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
               IR++KNLRVC DCH+A K IS +VGREIV+RDS+RFHHF  G+CSCGD+W
Sbjct: 888 PGETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDFW 941



 Score =  242 bits (618), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 178/693 (25%), Positives = 324/693 (46%), Gaps = 62/693 (8%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H  ++  G   ++ + N+L+N+Y +  D+  A K+FD M  R+ VSW  +++ Y   
Sbjct: 78  RQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQN 137

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G  ++A +    M   G   N+    +++  C +        G ++H  ++      DG+
Sbjct: 138 GCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKL--RLLDLGRKIHHRIINEGLEPDGI 195

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           + N L+ MYGSC  S D  + +F  +    ++ W ++I+  SQ G       +F +M  E
Sbjct: 196 LGNALVHMYGSC-GSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLE 254

Query: 185 GFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           G    +K NE T+ S++    +  +V  G  +  +IL    ++   S   + ++L+S + 
Sbjct: 255 G----VKANEVTYMSMVEVCRNLDAVKEGEMIDARIL----ESPFCSSTLLATSLISLYG 306

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGL---------------------------------- 268
           + G    A+ + E M Q++VV+ N +                                  
Sbjct: 307 QCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLS 366

Query: 269 -------MEGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                  +E   +G+E+H  ++  GL    VAVGN ++ MY KCG  + + SVF  M  K
Sbjct: 367 VLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRK 426

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D VSWN +I+    N  +++A+  F  M  +GL S+ F+L+S L +C  L  + L +QIH
Sbjct: 427 DDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIH 486

Query: 381 GEGLKLGLDSD-VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS-EA 438
                 G   +  +V N+++++YA  G L    K F  + E   V+W+ ++ A+A S + 
Sbjct: 487 ARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDG 546

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN-VANETTIE 497
               A K++ +M   G  P  VTF++ L A ++ +  + G  +H +      V     + 
Sbjct: 547 PGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLG 606

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ 557
           N +++ YGKCG   D + +F +M E+   +SWNS+I  Y HN    +A++ +  M+ +G 
Sbjct: 607 NTIINMYGKCGSPSDAKLVFDQMPEKC-LISWNSLIVAYAHNGHALEALSSLQEMLLQGF 665

Query: 558 RLDHFTFATVLSACASVATLERGMEVHACGVR-ACLEFDVVIGSALVDMYSKCGRIDYAS 616
             D  T  ++L   +    LERG+E     ++   LE        LVD+ ++ G +D A 
Sbjct: 666 DPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAE 725

Query: 617 RFFDLMPV--RNVYSWNSMISGYARHGHGDKAL 647
                 P    +  +W ++++    +G   + +
Sbjct: 726 ELILASPACQADTIAWMTLLAACKSYGDPQRGI 758



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 207/480 (43%), Gaps = 58/480 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K+ ++   +IL+  F     L  +LI++Y + G L  A  L + M  R+ V+W  +V+  
Sbjct: 277 KEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTAC 336

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN-QT 120
              G + EA  + + M   GF  N+    SVL AC          G ++H  VL      
Sbjct: 337 AQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANL--EALSQGREIHARVLLCGLLQ 394

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            +  V N +I MYG C + T+ A  +FE +  +D +SWN++I+            +LF  
Sbjct: 395 REVAVGNSVITMYGKCGQ-TEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHG 453

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQI-LAMVKKAGLLSDLYVGSALVS 239
           M+ EG R     NE+T  SL+ A     L    L +QI           +   VG+++V+
Sbjct: 454 MELEGLR----SNEFTLLSLLEACGG--LEDLKLARQIHARAAAGGFGGNSTAVGNSVVN 507

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLM---------EGRR----------------- 273
            +AR G+   A+K F+ + +K +V+ + ++          GRR                 
Sbjct: 508 MYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGE 567

Query: 274 -----------------KGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFR 315
                             G+ +H     SG  +  + +GN ++NMY KCG+  D++ VF 
Sbjct: 568 VTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFD 627

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M  K  +SWN++I     NG   EA+ +   M   G    + + +S L   +  G +  
Sbjct: 628 QMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLER 687

Query: 376 GQQIHGEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP--EHDQVSWNSVIGA 432
           G +     ++  GL+        L+ L A  G+L    ++    P  + D ++W +++ A
Sbjct: 688 GVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAA 747


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 318/894 (35%), Positives = 495/894 (55%), Gaps = 63/894 (7%)

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY--GSCLESTDCARRIF 147
            S+L+ C++      + G QVH  ++ +       + + L+ +Y    C+E    ARR+F
Sbjct: 93  ASILQKCRKL--YNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVED---ARRMF 147

Query: 148 EEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS 207
           +++  R++ SW +I+ +Y   GD     KLF  M  EG R    P+ + F  +  A   S
Sbjct: 148 DKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVR----PDHFVFPKVFKAC--S 201

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
            L    + + +   +   G   +  V  +++  F + G    AR+ FE++  K+V   N 
Sbjct: 202 ELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNI 261

Query: 268 LMEGRRKGKEVHGYLI------RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG-- 319
           ++ G     E    L        SG+       N +++ YA+ G  +++   F  M G  
Sbjct: 262 MVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLK 321

Query: 320 ---KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
               + VSW  +I+G +QNG   EA+  F  M  +G+  ++ ++ S +S+C +L  +  G
Sbjct: 322 DFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHG 381

Query: 377 QQIHGEGLKLG-LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA- 434
           ++IHG  +K+  LDSD+ V N+L+  YA    +    + F ++ + D VSWN+++  +A 
Sbjct: 382 REIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYAL 441

Query: 435 -----DSEALVSE----------------------------AVKYYLDMRRAGWSPNGVT 461
                ++  L+SE                            A++++  M   G  PN  T
Sbjct: 442 RGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTT 501

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
               LAA       KLG ++H  V++ ++   T + +AL+S Y  C  ++    +F+ +S
Sbjct: 502 ISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELS 561

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
            R D V WNS+IS    +     A++L+  M      ++  T  + L AC+ +A L +G 
Sbjct: 562 TR-DVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGK 620

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           E+H   +R  L+    I ++L+DMY +CG I  + R FDLMP R++ SWN MIS Y  HG
Sbjct: 621 EIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHG 680

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
            G  A+ LF Q +  G  P+H+TF  +LSACSH+GL++EG+K+FK M   Y + P +EQ+
Sbjct: 681 FGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQY 740

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM 761
           +CMVDLL RAG+ ++  EFI KMP  PN+ +W ++LGA CR +C   +L   AA  LFE+
Sbjct: 741 ACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA-CRIHC-NPDLAEYAARYLFEL 798

Query: 762 EPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDES 821
           EPQ++ NYVL+AN+Y++ G+WED AK R  MKE  V K  GCSW+ +K  +H FV GD S
Sbjct: 799 EPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTS 858

Query: 822 HPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRN 880
           HP  + I  K++ L   +++ GYVP T F L D++ + KE  +  HSEKIA+AF +++  
Sbjct: 859 HPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTT 918

Query: 881 SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +  P+RI+KNLRVCGDCHSA KFISK+  R+I++RD+ RFHHF DG CSCGDYW
Sbjct: 919 AGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972



 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 193/687 (28%), Positives = 316/687 (45%), Gaps = 58/687 (8%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q++ +G     FL + L+ VY + G +  A ++FD+M +RN  SW  I+  Y   G  
Sbjct: 112 HAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDY 171

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            E  K+F  MV  G   + +    V +AC E     ++ G  V+  +L      +  V  
Sbjct: 172 EETIKLFYLMVNEGVRPDHFVFPKVFKACSEL--KNYRVGKDVYDYMLSIGFEGNSCVKG 229

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            ++ M+  C    D ARR FEEIE +D+  WN ++S Y+ +G+     K  S M+  G  
Sbjct: 230 SILDMFIKC-GRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSG-- 286

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             +KP++ T+ ++I+  Y+         +  L M        ++   +AL++G  + G  
Sbjct: 287 --VKPDQVTWNAIIS-GYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYD 343

Query: 248 YYARKIFEQMIQKNV----------VSMNGLMEGRRKGKEVHGYLIRSGLFDM-VAVGNG 296
           + A  +F +M+ + V          VS    +   R G+E+HGY I+    D  + VGN 
Sbjct: 344 FEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNS 403

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL--- 353
           LV+ YAKC +++ +R  F  +   D VSWN M++G    G +EEAI     M+  G+   
Sbjct: 404 LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPD 463

Query: 354 -------------------------------MSSNFSLIS-TLSSCASLGWIMLGQQIHG 381
                                          M  N + IS  L++C  +  + LG++IHG
Sbjct: 464 IITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHG 523

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             L+  ++    V +AL+S+Y+    L     VF  +   D V WNS+I A A S   V+
Sbjct: 524 YVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVN 583

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
            A+    +M  +    N VT ++ L A S  +  + G ++H  +I+  +     I N+L+
Sbjct: 584 -ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLI 642

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
             YG+CG +    +IF  M + RD VSWN MIS Y  +     A+NL       G + +H
Sbjct: 643 DMYGRCGSIQKSRRIFDLMPQ-RDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNH 701

Query: 562 FTFATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
            TF  +LSAC+    +E G +          ++  V   + +VD+ S+ G+ +    F +
Sbjct: 702 ITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIE 761

Query: 621 LMPVR-NVYSWNSMISGYARHGHGDKA 646
            MP   N   W S++     H + D A
Sbjct: 762 KMPFEPNAAVWGSLLGACRIHCNPDLA 788



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 105/459 (22%), Positives = 191/459 (41%), Gaps = 78/459 (16%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMP----DRNSVSWACIVSGYTHKGMSNEACKMF 74
           D+   N ++  Y   G    A +L  EM     + + ++W  +V+G+T  G    A + F
Sbjct: 428 DLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFF 487

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
           + M   G   N   +   L AC +      K G ++H  VL+++      V + LI+MY 
Sbjct: 488 QRMHSMGMDPNTTTISGALAACGQV--RNLKLGKEIHGYVLRNHIELSTGVGSALISMYS 545

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
            C +S + A  +F E+ TRD++ WNSIIS  +Q G +++   L   M       +++ N 
Sbjct: 546 GC-DSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLS----NVEVNT 600

Query: 195 YTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
            T  S + A   S L+     ++I   + + GL +  ++ ++L+  + R G+   +R+IF
Sbjct: 601 VTMVSALPAC--SKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIF 658

Query: 255 EQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
           + M Q+++VS N ++                 ++ M   G   VN++ +          F
Sbjct: 659 DLMPQRDLVSWNVMI----------------SVYGMHGFGMDAVNLFQQ----------F 692

Query: 315 RFM-IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           R M +  + +++  ++S    +G  EE    F  M+ +                      
Sbjct: 693 RTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTE---------------------- 730

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                         +D  V     ++ L + AG  +  L+    MP E +   W S++GA
Sbjct: 731 ------------YAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA 778

Query: 433 --FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
                +  L   A +Y  ++     S N V   NI +AA
Sbjct: 779 CRIHCNPDLAEYAARYLFELEPQS-SGNYVLMANIYSAA 816



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 145/320 (45%), Gaps = 18/320 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  +L++       + + LI++Y     L  A  +F E+  R+ V W  I+S  
Sbjct: 516 KLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISAC 575

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G S  A  + +EM  +   +N   + S L AC +   +  + G ++H  +++     
Sbjct: 576 AQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKL--AALRQGKEIHQFIIRCGLDT 633

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              + N LI MYG C  S   +RRIF+ +  RDL+SWN +ISVY   G  +    LF + 
Sbjct: 634 CNFILNSLIDMYGRC-GSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQF 692

Query: 182 QREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           +  G    LKPN  TF +L++A ++S ++   +   +++          + Y  + +V  
Sbjct: 693 RTMG----LKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQY--ACMVDL 746

Query: 241 FARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRK--GKEVHGYLIRSGLFDMVAVGNG- 296
            +R G F    +  E+M  + N      L+   R     ++  Y  R  LF++    +G 
Sbjct: 747 LSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARY-LFELEPQSSGN 805

Query: 297 ---LVNMYAKCGTIDDSRSV 313
              + N+Y+  G  +D+  +
Sbjct: 806 YVLMANIYSAAGRWEDAAKI 825


>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 331/972 (34%), Positives = 515/972 (52%), Gaps = 80/972 (8%)

Query: 24   NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
            + L++ + + G +  AS LF  M +R+ VSW  ++ GY  +G ++++  MF+ M+R G +
Sbjct: 131  HALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLV 190

Query: 84   LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY---GSCLEST 140
             + Y LGSVLRA  E G  G     Q+H ++ +       +V+ +LI  Y   GS   + 
Sbjct: 191  PDCYTLGSVLRASAEGG--GLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAK 248

Query: 141  DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG--------FRYSLKP 192
            D  + + +    +DL S  ++I+ Y+  G       L     + G        F    + 
Sbjct: 249  DLRKGMLK----KDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEK 304

Query: 193  NEYTFGSLITA----AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
            N  ++ SLI+      Y  +    Y+  ++    + +         S ++SG+ R+G + 
Sbjct: 305  NVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASW--------STMLSGYVRVGLYE 356

Query: 249  YARKIFEQMIQKNVVSMNGLMEGR------------RKGKEVHGYLIRSGLFDMVAVGNG 296
             A  +F QM    V   NG M                +G +VHG+++++G+   V VG  
Sbjct: 357  EAVGLFCQMWGLGV-EPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTA 415

Query: 297  LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
            LV+ Y   G + +++ +F  M   + VSW +++ G   +G   E +  +  MR++G+  +
Sbjct: 416  LVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGN 475

Query: 357  NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
              +  +  SSC  L   +LG Q+ G  ++ G +  VSV+N+L+S+++    +     VF 
Sbjct: 476  QNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFD 535

Query: 417  LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
             M E D +SWN++I A+A    L  E+++ +  MR      N  T  ++L+  SS    K
Sbjct: 536  HMNECDIISWNAMISAYA-HHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLK 594

Query: 477  LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER------------- 523
             G  +H  V+K  + +   I N LL+ Y + G  +D E +F  M+ER             
Sbjct: 595  WGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYV 654

Query: 524  --------------------RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
                                 D V+WN++I G+  NE   +A+     + ++G   ++ T
Sbjct: 655  QDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYIT 714

Query: 564  FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
              + L+A A++A LE G ++H   ++   E D+ + +A +DMY KCG +    +      
Sbjct: 715  MVS-LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPI 773

Query: 624  VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
             R+  SWN +IS +ARHG   KA   F +M   GP PDHVTFV +LSAC+H GLVDEG  
Sbjct: 774  NRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLA 833

Query: 684  HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
            ++ SM++ +G+ P +E   C++DLLGR+G L   E FI +MP+ PN L WR++L A CR 
Sbjct: 834  YYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAA-CRI 892

Query: 744  NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
            +    EL RK A  L E++P +   YVL +N+ A+ GKWEDV   RK M    +KK+  C
Sbjct: 893  H-GNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPAC 951

Query: 804  SWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDL 863
            SWV +KD VH F  G++ HP+   I  KL EL +  ++AGYVP T FAL D++ E KE  
Sbjct: 952  SWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYN 1011

Query: 864  VSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHH 922
            +  HSE++A+AF L    +   +RI KNLRVCGDCHS +KF+S IVGR+IVLRD  RFHH
Sbjct: 1012 LWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHH 1071

Query: 923  FNDGKCSCGDYW 934
            F+ GKCSCGDYW
Sbjct: 1072 FSGGKCSCGDYW 1083



 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 227/847 (26%), Positives = 393/847 (46%), Gaps = 135/847 (15%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K   L H  ++ +GF  D+ L   LI  YV+VGD+ +A  +FD MP+R+ VSW  +VSGY
Sbjct: 47  KQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGY 106

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G   +A  +F +M                   + CG              +K+N   
Sbjct: 107 SQNGRFEKAFVLFSDM-------------------RHCG--------------VKANHA- 132

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
                  L+  +  C +  D A  +F  +  RD++SWN++I  Y+ +G     F +F  M
Sbjct: 133 -------LVDFHSKCGKMED-ASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSM 184

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            R G    L P+ YT GS++ A  S+   G  +  QI  ++ + G  S   V   L++ +
Sbjct: 185 LRGG----LVPDCYTLGSVLRA--SAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAY 238

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
           A+ G+   A+ + + M++K++ S   L+ G              G++ M   GN L++MY
Sbjct: 239 AKNGSLRSAKDLRKGMLKKDLFSSTALITG----------YAHEGIYTM---GNALIDMY 285

Query: 302 AKCGTIDD---------------------------------SRSVFRFMIGKDSVSWNTM 328
           AK G I+D                                 +R VF  M  ++  SW+TM
Sbjct: 286 AKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTM 345

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM-LGQQIHGEGLKLG 387
           +SG  + G YEEA+  FC M   G+  + F + S +++C+  G++   G Q+HG  +K G
Sbjct: 346 LSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTG 405

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
           +  DV V  AL+  Y   G +    K+F  MP+H+ VSW S++  ++DS     E +  Y
Sbjct: 406 ILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDS-GNPGEVLNVY 464

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
             MR+ G S N  TF  + ++        LG+QV   +I+Y   +  ++ N+L+S +   
Sbjct: 465 QRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSF 524

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
             +++   +F  M+E  D +SWN+MIS Y H+ L  +++    +M       +  T +++
Sbjct: 525 SSVEEACYVFDHMNE-CDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSL 583

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           LS C+SV  L+ G  +H   V+  L+ +V I + L+ +YS+ GR + A   F  M  R++
Sbjct: 584 LSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDL 643

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            SWNSM++ Y + G     L + +++   G  PD VT+  ++   +     +E  K +K 
Sbjct: 644 ISWNSMMACYVQDGKCLDGLKILAELLQMGK-PDRVTWNALIGGHAENEEPNEAVKAYKL 702

Query: 688 M---------------------------SQVYGLI------PQLEQFSCMVDLLGRAGEL 714
           +                            Q++GL+        L   +  +D+ G+ GE+
Sbjct: 703 IREKGIPANYITMVSLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEM 762

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ-NAVNYVLLA 773
             + + + + PI  + L W  ++ A  R  C +    R+  + + ++ P+ + V +V L 
Sbjct: 763 HDVLKMLPQ-PINRSRLSWNILISAFARHGCFQK--ARETFHEMLKLGPKPDHVTFVSLL 819

Query: 774 NMYASGG 780
           +    GG
Sbjct: 820 SACNHGG 826



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 131/563 (23%), Positives = 236/563 (41%), Gaps = 129/563 (22%)

Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
           + +++G  +H +LI +G    + +   L+  Y K G +  +R+VF  M  +  VSW  M+
Sbjct: 44  KAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMV 103

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
           SG  QNG +E+A + F  MR  G+  +N +L+   S C  +                   
Sbjct: 104 SGYSQNGRFEKAFVLFSDMRHCGV-KANHALVDFHSKCGKM------------------- 143

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
                         DA YL      F  M E D VSWN++IG +A  +    ++   +  
Sbjct: 144 -------------EDASYL------FGTMMERDVVSWNAMIGGYA-VQGFADDSFCMFRS 183

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-----YNV-------------- 490
           M R G  P+  T  ++L A++      + +Q+H  + +     Y++              
Sbjct: 184 MLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGS 243

Query: 491 --------------------------ANET--TIENALLSCYGKCGEMDDCEKIFARMSE 522
                                     A+E   T+ NAL+  Y K GE++D ++ F  M E
Sbjct: 244 LRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEE 303

Query: 523 R--------------------------------RDEVSWNSMISGYIHNELLPKAMNLVW 550
           +                                R+E SW++M+SGY+   L  +A+ L  
Sbjct: 304 KNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFC 363

Query: 551 FMMQRGQRLDHFTFATVLSACASVATL-ERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
            M   G   + F  A++++AC+    + + G +VH   V+  +  DV +G+ALV  Y   
Sbjct: 364 QMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSI 423

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
           G +  A + F+ MP  NV SW S++ GY+  G+  + L ++ +M+ +G   +  TF  V 
Sbjct: 424 GLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVT 483

Query: 670 SACSHAGLVDEGFKHFKSMSQV--YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP-- 725
           S+C   GL+++    ++ +  +  YG    +   + ++ +      +++     + M   
Sbjct: 484 SSC---GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNEC 540

Query: 726 --ITPNSLIWRTVLGACCRANCR 746
             I+ N++I        CR + R
Sbjct: 541 DIISWNAMISAYAHHGLCRESLR 563



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 148/367 (40%), Gaps = 68/367 (18%)

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           ++ IL         K GH +H  +I     ++  +   L+  Y K G++     +F  M 
Sbjct: 33  YLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMP 92

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
           E R  VSW +M+SGY  N    KA  L                                 
Sbjct: 93  E-RSVVSWTAMVSGYSQNGRFEKAFVLF-------------------------------S 120

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           ++  CGV+A          ALVD +SKCG+++ AS  F  M  R+V SWN+MI GYA  G
Sbjct: 121 DMRHCGVKA--------NHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQG 172

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
             D +  +F  M   G +PD  T   VL A +  G            +Q++G+I QL   
Sbjct: 173 FADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGG-------GLIIANQIHGIITQLGYG 225

Query: 702 S------CMVDLLGRAGELDKIEEF----INKMPITPNSLIW-------RTVLGACCRAN 744
           S       +++   + G L   ++     + K   +  +LI         T+  A     
Sbjct: 226 SYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMY 285

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
            +  E+   A     EME +N +++  L + YA  G +  +A AR    E   + EA  S
Sbjct: 286 AKSGEI-EDAKRAFDEMEEKNVISWTSLISGYAKHG-YGHMAHARYVFDEMRHRNEA--S 341

Query: 805 WVTMKDG 811
           W TM  G
Sbjct: 342 WSTMLSG 348



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 48/311 (15%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSW----AC------ 56
            H  ++K G   +V +CNTL+ +Y   G    A  +F  M +R+ +SW    AC      
Sbjct: 599 IHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGK 658

Query: 57  ------------------------IVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSV 92
                                   ++ G+      NEA K +K +   G   N   + S+
Sbjct: 659 CLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSL 718

Query: 93  LRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIET 152
                    +  + G Q+H LV+K     D  V+N  + MYG C E  D  + + + I  
Sbjct: 719 AATAN---LAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPI-N 774

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGS 212
           R  +SWN +IS +++ G      + F  M + G     KP+  TF SL++A     L   
Sbjct: 775 RSRLSWNILISAFARHGCFQKARETFHEMLKLG----PKPDHVTFVSLLSACNHGGLVDE 830

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNVVSMNGLMEG 271
             L    +M ++ G+   +     ++    R G   +A    ++M +  N ++   L+  
Sbjct: 831 G-LAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAA 889

Query: 272 RRKGKEVHGYL 282
            R    +HG L
Sbjct: 890 CR----IHGNL 896



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/322 (22%), Positives = 131/322 (40%), Gaps = 51/322 (15%)

Query: 558 RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
           RLD   +  +L  C      ++G  +H   +      D+ + + L+  Y K G +  A  
Sbjct: 27  RLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARN 86

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH--------------- 662
            FD MP R+V SW +M+SGY+++G  +KA  LFS M+  G   +H               
Sbjct: 87  VFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANHALVDFHSKCGKMEDA 146

Query: 663 ------------VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
                       V++  ++   +  G  D+ F  F+SM +  GL+P       ++     
Sbjct: 147 SYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRG-GLVPDCYTLGSVLRASAE 205

Query: 711 AGEL---DKIEEFINKMPITPNSLIWRTVLGACCR-------ANCRKTELGRK--AANML 758
            G L   ++I   I ++      ++   ++ A  +        + RK  L +   ++  L
Sbjct: 206 GGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTAL 265

Query: 759 FEMEPQNAVNYVL---LANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
                   + Y +   L +MYA  G+ ED  +A   M+E  V      SW ++  G    
Sbjct: 266 ITGYAHEGI-YTMGNALIDMYAKSGEIEDAKRAFDEMEEKNV-----ISWTSLISGYAKH 319

Query: 816 VAGDESHPEKDLIYEKLKELNQ 837
             G  +H     ++++++  N+
Sbjct: 320 GYGHMAHAR--YVFDEMRHRNE 339


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 324/950 (34%), Positives = 503/950 (52%), Gaps = 56/950 (5%)

Query: 29  VYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYA 88
           +Y + G +  A  +FD M +RN  SW  ++SGY   G   EA   F+++   G   + + 
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE 148
           + S++ AC +      K G Q H   +K    +D  V    +  Y S    ++ A+++F 
Sbjct: 61  IASLVTACNKSSIMA-KEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSN-AQKMFN 118

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
           E+  R+++SW S++  YS  G    V   + RM+ EG    +  NE     +I++     
Sbjct: 119 EMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEG----ICCNENNIALVISSC--GF 172

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
           L    L  Q+L    K GL + +   ++L+  F   G+   A  IF +M +++ +S N +
Sbjct: 173 LMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSI 232

Query: 269 MEGRRK-----------------------------------------GKEVHGYLIRSGL 287
           +    +                                         GK VHG  ++ GL
Sbjct: 233 ISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGL 292

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
              + + N L+++Y+  G   D+  +FR M  +D +SWN+M++   Q+G    A+  F  
Sbjct: 293 ESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAE 352

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M       +  +  S L++C    +   G+ +HG  + LGL  ++ + N L++ Y     
Sbjct: 353 MLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHK 412

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP-NGVTFINIL 466
           ++   KVF  MP+ D+V+WN++IG FA++  L +EAV  +  MR    S  + +T +NIL
Sbjct: 413 MAEAKKVFQRMPKLDKVTWNALIGGFANNAEL-NEAVAAFKLMREGSTSGVDYITIVNIL 471

Query: 467 AAASSFS-MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
            +  +   + K G  +HA  +      +  ++++L++ Y KCG++     IF ++  +  
Sbjct: 472 GSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTS 531

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
            V WN++I+         +A+ LV  M   G   D F F+T LS  A +A LE G ++H 
Sbjct: 532 SV-WNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHG 590

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
             ++   E D  I +A +DMY KCG +D A R       R+  SWN++IS  ARHG   K
Sbjct: 591 STIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHK 650

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
           A   F  M   G  P+HV+FV +LSACSH GLVDEG  ++ SM+ VYG+ P +E   CM+
Sbjct: 651 AKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMI 710

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN 765
           DLLGR+G L + E FI +MPI PN L+WR++L A CR   R  +LGRKAA  L E++P +
Sbjct: 711 DLLGRSGRLVEAEAFITEMPIPPNDLVWRSLL-ASCRIY-RNLDLGRKAAKHLLELDPSD 768

Query: 766 AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
              YVL +N++A+ G+WEDV   R  M   +++K+   SWV  K  + +F  GD++HP+ 
Sbjct: 769 DSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQM 828

Query: 826 DLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LP 884
           + I  KL  L + + +AGYVP T ++L D + E KE  +  HSE+IA+AF L    +   
Sbjct: 829 EQINGKLLGLMKIVGEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALAFGLINIPEGST 888

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +RI KNLRVCGDCHS FKF+S ++GR+IVLRD  RFHHF +G CSC DYW
Sbjct: 889 VRIFKNLRVCGDCHSFFKFVSGVLGRKIVLRDPYRFHHFTNGNCSCSDYW 938



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 194/690 (28%), Positives = 318/690 (46%), Gaps = 76/690 (11%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +K+   FH   +K G  YDVF+  + ++ Y   G +++A K+F+EMPDRN VSW  ++  
Sbjct: 75  AKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVS 134

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFK----FGMQVHCLVLK 116
           Y+  G   E    +K M   G   N   +  V+ +C      GF      G Q+    LK
Sbjct: 135 YSDNGSKKEVINTYKRMRHEGICCNENNIALVISSC------GFLMDIILGHQLLGHALK 188

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
                    +N LI M+G C +  + A  IF E+  RD ISWNSIIS  +Q       F+
Sbjct: 189 FGLETKVSAANSLIFMFGGCGDINE-ACSIFNEMNERDTISWNSIISANAQNTLHEESFR 247

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL--QQILAMVKKAGLLSDLYVG 234
            F  M     R   +   YT  S++ +   SV    YL   + +  +  K GL S++ + 
Sbjct: 248 YFHWM-----RLVHEEINYTTLSILLSICGSV---DYLKWGKGVHGLAVKYGLESNICLC 299

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM-----EGR----------------- 272
           + L+S ++  G    A  IF +M +++++S N ++     +GR                 
Sbjct: 300 NTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKE 359

Query: 273 -------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
                                GK +HG+++  GL D + +GN L+  Y KC  + +++ V
Sbjct: 360 INYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKV 419

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF-SLISTLSSCASL-G 371
           F+ M   D V+WN +I G   N    EA+  F  MR       ++ ++++ L SC +   
Sbjct: 420 FQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHED 479

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
            I  G  IH   +  G D D  V ++L+++YA  G L     +F  +       WN++I 
Sbjct: 480 LIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIA 539

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA 491
           A A       EA+K  + MR AG   +   F   L+ A+  +M + G Q+H   IK    
Sbjct: 540 ANA-RYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFE 598

Query: 492 NETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWF 551
            +  I NA +  YGKCGE+DD  +I  + ++ R  +SWN++IS    +    KA      
Sbjct: 599 LDHFIINAAMDMYGKCGELDDALRILPQPTD-RSRLSWNTLISISARHGQFHKAKETFHD 657

Query: 552 MMQRGQRLDHFTFATVLSACASVATLERGMEVHAC-----GVRACLEFDVVIGSALVDMY 606
           M++ G + +H +F  +LSAC+    ++ G+  +A      G++  +E  V     ++D+ 
Sbjct: 658 MLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCV----CMIDLL 713

Query: 607 SKCGRIDYASRFFDLMPV-RNVYSWNSMIS 635
            + GR+  A  F   MP+  N   W S+++
Sbjct: 714 GRSGRLVEAEAFITEMPIPPNDLVWRSLLA 743


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 304/808 (37%), Positives = 460/808 (56%), Gaps = 36/808 (4%)

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           + +Y  C +    AR++  +    DL+SW+++IS Y Q G        +  M   G    
Sbjct: 89  VNLYSKC-QCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLG---- 143

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQ--QILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
            K NE+TF        SSVL G  L +  ++   + +  L++++     + +G +     
Sbjct: 144 AKGNEFTF--------SSVLKGCSLTRNLELGKQIHRVALVTEM-----ISTGISP---- 186

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
                   +     V++    +E    G +VHGYLI+ G        N L++MYAK G  
Sbjct: 187 -------NEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCP 239

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
           + + +VF  +   D VSWN +I+G   +   + A+     M    +  S F+L S L +C
Sbjct: 240 EAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKAC 299

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
           A++G + LG+Q+H   +K+ ++ D  V   L+ +Y+  G L     VF LMP  D + WN
Sbjct: 300 AAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWN 359

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           S+I  +++    + EA+  + +M + G   N  T   IL + +         QVH   IK
Sbjct: 360 SIISGYSNCGYDI-EAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIK 418

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
                +  + N+LL  YGKC  ++D  K+F  +    D V++ SMI+ Y    L  +A+ 
Sbjct: 419 SGYQYDGYVANSLLDSYGKCCLLEDAAKVF-EVCPAEDLVAYTSMITAYSQYGLGEEALK 477

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
           +   M  R  + D F F+++ +ACA+++  E+G ++H   ++  L  DV  G++LV+MY+
Sbjct: 478 MYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYA 537

Query: 608 KCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVG 667
           KCG ID AS  F+ +  R + SW++MI G A+HGHG KAL LF QM  +G LP+H+T V 
Sbjct: 538 KCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVS 597

Query: 668 VLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPIT 727
           VLSAC+HAGLV E  + F  M +++G+ P  E ++CMVD+LGR G LD+    + +MP  
Sbjct: 598 VLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQ 657

Query: 728 PNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
            ++ +W  +LGA  R + +  ELGR AA ML  +EP+ +  ++LLAN+YAS G W++VAK
Sbjct: 658 ASAAVWGALLGA-ARIH-KNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAK 715

Query: 788 ARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQ 847
            R++MK + VKKE G SW+ +KD V+ F+ GD SHP    IY KL +L +++  AGYVP 
Sbjct: 716 VRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPM 775

Query: 848 TKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISK 906
            +  L D+E   KE L+ +HSEK+AVAF ++      PIR+ KNLRVC DCH+AFKFISK
Sbjct: 776 IETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFISK 835

Query: 907 IVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +  REI++RD NRFHHF DG CSCGDYW
Sbjct: 836 VASREIIVRDINRFHHFRDGSCSCGDYW 863



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 149/645 (23%), Positives = 272/645 (42%), Gaps = 101/645 (15%)

Query: 27  INVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNR 86
           +N+Y +      A KL  +  + + VSW+ ++SGY   G   EA   + EM   G   N 
Sbjct: 89  VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148

Query: 87  YALGSVLRACQ-----ECG------------------PSGF---------------KFGM 108
           +   SVL+ C      E G                  P+ F                +GM
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGS--CLESTDCARRIFEEIETRDLISWNSIIS--V 164
           +VH  ++K     D   +N L+ MY    C E+   A  +F EI   D++SWN++I+  V
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEA---AIAVFYEIPKPDIVSWNAVIAGCV 265

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
             ++ D     KL  +M      Y + P+ +T  S + A   + +    L +Q+ + + K
Sbjct: 266 LHEKNDL--ALKLLGKMG----SYRVAPSMFTLSSALKAC--AAIGLVKLGRQLHSALMK 317

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG------------- 271
             +  D +VG  L+  +++ G    AR +F+ M  K+V+  N ++ G             
Sbjct: 318 MDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSL 377

Query: 272 ----RRKG------------------------KEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
                ++G                        ++VH   I+SG      V N L++ Y K
Sbjct: 378 FTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGK 437

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           C  ++D+  VF     +D V++ +MI+   Q G  EEA+  +  M+   +    F   S 
Sbjct: 438 CCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSL 497

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
            ++CA+L     G+QIH   LK GL SDV   N+L+++YA  G +     +F  +     
Sbjct: 498 FNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGI 557

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSW+++IG  A       +A++ +  M + G  PN +T +++L+A +   +     +   
Sbjct: 558 VSWSAMIGGLAQ-HGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFG 616

Query: 484 QVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI-SGYIHNEL 541
            + K + +         ++   G+ G +D+   +   M  +     W +++ +  IH  +
Sbjct: 617 LMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNI 676

Query: 542 -LPKAMNLVWFMMQRGQRLDHFTFATVLSACA---SVATLERGME 582
            L +    +   ++  +   H   A + ++     +VA + R M+
Sbjct: 677 ELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMK 721



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 210/429 (48%), Gaps = 34/429 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H  ++K     D F+   LI++Y + G L  A  +FD MP ++ + W  I+SGY
Sbjct: 306 KLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGY 365

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           ++ G   EA  +F  M + G   N+  L ++L++    G     F  QVH + +KS   +
Sbjct: 366 SNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKS--TAGSQANGFCEQVHTISIKSGYQY 423

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           DG V+N L+  YG C    D A ++FE     DL+++ S+I+ YSQ G      K++ RM
Sbjct: 424 DGYVANSLLDSYGKCCLLEDAA-KVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRM 482

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           Q       +KP+ + F SL  A  +  LS     +QI   V K GLLSD++ G++LV+ +
Sbjct: 483 QDR----DIKPDAFIFSSLFNACAN--LSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMY 536

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------RKGKEVHGYLIRSGLFDMVAVGN 295
           A+ G+   A  IF ++  + +VS + ++ G       RK  ++   ++++G+        
Sbjct: 537 AKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHIT-- 594

Query: 296 GLVNMYAKC---GTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
            LV++ + C   G + ++R  F  M     I      +  M+  L + G  +EA++    
Sbjct: 595 -LVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMV---- 649

Query: 348 MRRDGLMSSNFSLISTLSSCASLGW-IMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADA 405
           + ++    ++ ++   L   A +   I LG+  H   + L L+ + S ++ LL+ +YA  
Sbjct: 650 LVKEMPFQASAAVWGALLGAARIHKNIELGR--HAAEMLLTLEPEKSGTHILLANIYAST 707

Query: 406 GYLSRCLKV 414
           G      KV
Sbjct: 708 GMWDNVAKV 716


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 291/762 (38%), Positives = 434/762 (56%), Gaps = 47/762 (6%)

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR-- 272
           L QI+ +V K GL ++    + LVS F++ G+   A ++FE +  K     + +++G   
Sbjct: 65  LHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAK 124

Query: 273 ---------------------------------------RKGKEVHGYLIRSGLFDMVAV 293
                                                  ++GKE+HG LI +     V  
Sbjct: 125 NSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFA 184

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
             G+VNMYAKC  IDD+  +F  M  +D VSWNT+I+G  QNG  ++A+     M+ +G 
Sbjct: 185 MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQ 244

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
              + +L++ L + A +G +M+G+ IHG  ++ G    V++S AL  +Y+  G +     
Sbjct: 245 RPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARL 304

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           +F  M +   VSWNS++  +  +     +A+  +  M   G  P GVT +  L A +   
Sbjct: 305 IFDGMDQKTVVSWNSMMDGYVQN-GEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLG 363

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
             + G  VH  V + N+ ++ ++ N+L+S Y KC  +D    IF  ++ R   VSWN+MI
Sbjct: 364 DLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRT-HVSWNAMI 422

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
            GY  N  + +A+N    M   G + D FT  +V+ A A ++       +H   +R+CL+
Sbjct: 423 LGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLD 482

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
            ++ + +ALVDMYSKCG I  A + FD++  R+V +WN+MI GY  HG G  AL LF +M
Sbjct: 483 KNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKM 542

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGE 713
           K     P+ +T++ V+SACSH+GLVDEG +HFKSM Q YGL P ++ +  MVDLLGRAG 
Sbjct: 543 KKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGR 602

Query: 714 LDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLA 773
           + +  +FI  MPI+P   ++  +LGAC     +  E+G KAA  LFE+ P     +VLLA
Sbjct: 603 IKEAWDFIENMPISPGITVYGAMLGAC--KIHKNIEVGEKAAKKLFELNPDEGGYHVLLA 660

Query: 774 NMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLK 833
           N+YAS  KW  VA+ RK M++  +KK  GCS V +++ VH F +G  +HP+   IY  L+
Sbjct: 661 NIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLE 720

Query: 834 ELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLR 892
           EL  +++ AGYVP T   L D+E + +E L++ HSEK+A+AF L   S    I + KNLR
Sbjct: 721 ELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLR 779

Query: 893 VCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           VCGDCH+A K+IS + GREI++RD  RFHHF +G CSCGDYW
Sbjct: 780 VCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 213/477 (44%), Gaps = 58/477 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H Q++ + FA +VF    ++N+Y +   +  A K+FD MP+R+ VSW  I++G+
Sbjct: 164 KRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGF 223

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G + +A ++   M   G   +   L +VL A  + G      G  +H   +++    
Sbjct: 224 SQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGL--LMVGKSIHGYAIRAGFAK 281

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              +S  L  MY  C  S + AR IF+ ++ + ++SWNS++  Y Q G+      +F +M
Sbjct: 282 LVNISTALADMYSKC-GSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKM 340

Query: 182 QREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
             EG    + P   T    + A      +  G ++ +     V +  L SD+ V ++L+S
Sbjct: 341 LEEG----IDPTGVTIMEALHACADLGDLERGKFVHK----FVDQLNLGSDISVMNSLIS 392

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------------------------- 271
            +++      A  IF  +  +  VS N ++ G                            
Sbjct: 393 MYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFT 452

Query: 272 -------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                         R  K +HG +IRS L   + V   LV+MY+KCG I  +R +F  + 
Sbjct: 453 MVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMIS 512

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            +  ++WN MI G   +G    A+  F  M++  +  ++ + +S +S+C+  G +  G +
Sbjct: 513 DRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR 572

Query: 379 IHGEGLK--LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
            H + +K   GL+  +    A++ L   AG +         MP    ++ + +++GA
Sbjct: 573 -HFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGA 628



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 13/227 (5%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           ++ AK  H  I++     ++F+   L+++Y + G +  A KLFD + DR+ ++W  ++ G
Sbjct: 466 TRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDG 525

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKFGMQVHCLVLKSN 118
           Y   G+   A  +F +M +     N     SV+ AC   G    G +     H   +K +
Sbjct: 526 YGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR-----HFKSMKQD 580

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              +  + +     YG+ ++    A RI E  +  + +  +  I+VY        + K  
Sbjct: 581 YGLEPSMDH-----YGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNI 635

Query: 179 SRMQREGFR-YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
              ++   + + L P+E  +  L+   Y+S    S + +    M KK
Sbjct: 636 EVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKK 682


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 296/761 (38%), Positives = 449/761 (59%), Gaps = 24/761 (3%)

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
           L+ +  T  SLI     S+ S     ++  ++ +  G   DL   SA+VS FA     + 
Sbjct: 97  LQLDSVTLNSLI-----SLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFR 151

Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRK----------GKEVHGYLIRSGLFDM-VAVGNGLV 298
           A   F  MI+              +          G  + G+++++G     V VG GL+
Sbjct: 152 ALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLI 211

Query: 299 NMYAKC-GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           +M+ K  G +  +  VF  M  +++V+W  MI+ L Q G   EAI  F  M   G     
Sbjct: 212 DMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDR 271

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA---GYLSRCLKV 414
           F+L   +S+CA++  ++LGQQ+H + ++ GL  D  V   L+++YA     G +    K+
Sbjct: 272 FTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKI 331

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  + +H+  SW ++I  +        EA+  +  M      PN  TF + L A ++ + 
Sbjct: 332 FDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAA 391

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            ++G QV    +K   ++   + N+L+S Y + G +DD  K F  + E+ + +S+N++I 
Sbjct: 392 LRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEK-NLISYNTVID 450

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
            Y  N    +A+ L   +  +G     FTFA++LS  AS+ T+ +G ++HA  +++ L+ 
Sbjct: 451 AYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKL 510

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           +  + +AL+ MYS+CG I+ A + F+ M  RNV SW S+I+G+A+HG   +AL LF +M 
Sbjct: 511 NQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKML 570

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
            +G  P+ VT++ VLSACSH GLV+EG+KHFKSM   +G+IP++E ++CMVD+LGR+G L
Sbjct: 571 EEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSL 630

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
            +  +FIN MP   ++L+WRT LGA CR +    ELG+ AA M+ E EP +   Y+LL+N
Sbjct: 631 SEAIQFINSMPYKADALVWRTFLGA-CRVH-GNLELGKHAAKMIIEQEPHDPAAYILLSN 688

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           +YAS  KW++V+  RKAMKE  + KEAGCSWV +++ VH F  GD SHP+   IY++L+ 
Sbjct: 689 LYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQN 748

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKL-PIRIMKNLRV 893
           L+ K++  GYVP   F L D+E E KE L+  HSEKIAVAF L   SK+ PIR+ KNLR+
Sbjct: 749 LSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRI 808

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CGDCHSA K+IS   GREI++RD+NRFHH  DG+CSC +YW
Sbjct: 809 CGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 154/580 (26%), Positives = 260/580 (44%), Gaps = 65/580 (11%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEM-PDRNSVSWACIVSGYTHK 64
           L H ++ +     D    N+LI++Y + G    A+ +F  M   R+ +SW+ +VS + + 
Sbjct: 87  LVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANN 146

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQ-----ECGPSGFKFGMQVHCLVLKSNQ 119
            M   A   F +M+  G+  N Y   +  RAC        G S   FG  V    L+S  
Sbjct: 147 NMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDS--IFGFVVKTGYLQS-- 202

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D  V   LI M+         A ++FE++  R+ ++W  +I+   Q G       LF 
Sbjct: 203 --DVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFL 260

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            M   G+    +P+ +T   +I+A  +  L    L QQ+ +   + GL  D  VG  L++
Sbjct: 261 EMILSGY----EPDRFTLSGVISACANMEL--LLLGQQLHSQAIRHGLTLDRCVGCCLIN 314

Query: 240 GFARL---GNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------ 272
            +A+    G+   ARKIF+Q++  NV S   ++ G                         
Sbjct: 315 MYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIP 374

Query: 273 ------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                             R G++V  + ++ G   +  V N L++MYA+ G IDD+R  F
Sbjct: 375 NHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAF 434

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             +  K+ +S+NT+I    +N   EEA+  F  +   G+ +S F+  S LS  AS+G I 
Sbjct: 435 DILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIG 494

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
            G+QIH   +K GL  + SV NAL+S+Y+  G +    +VF  M + + +SW S+I  FA
Sbjct: 495 KGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFA 554

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANE 493
                 ++A++ +  M   G  PN VT+I +L+A S   +   G     +   ++ V   
Sbjct: 555 -KHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPR 613

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
                 ++   G+ G + +  +    M  + D + W + +
Sbjct: 614 MEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFL 653



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 231/470 (49%), Gaps = 56/470 (11%)

Query: 11  ILKHGF-AYDVFLCNTLINVYVR-VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSN 68
           ++K G+   DV +   LI+++V+  GDL SA K+F++MP+RN+V+W  +++     G + 
Sbjct: 194 VVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAG 253

Query: 69  EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV 128
           EA  +F EM+ +G+  +R+ L  V+ AC          G Q+H   ++   T D  V   
Sbjct: 254 EAIDLFLEMILSGYEPDRFTLSGVISACANM--ELLLLGQQLHSQAIRHGLTLDRCVGCC 311

Query: 129 LIAMYGSC-LESTDC-ARRIFEEIETRDLISWNSIISVYSQRGD-TISVFKLFSRMQREG 185
           LI MY  C ++ + C AR+IF++I   ++ SW ++I+ Y Q+G        LF  M    
Sbjct: 312 LINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGM---- 367

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
               + PN +TF S + A  +  L+   + +Q+     K G  S   V ++L+S +AR G
Sbjct: 368 ILTHVIPNHFTFSSTLKACAN--LAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSG 425

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRR-------------------------------- 273
               ARK F+ + +KN++S N +++                                   
Sbjct: 426 RIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLS 485

Query: 274 ---------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                    KG+++H  +I+SGL    +V N L++MY++CG I+ +  VF  M  ++ +S
Sbjct: 486 GAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVIS 545

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEG 383
           W ++I+G  ++G   +A+  F  M  +G+  +  + I+ LS+C+ +G +  G +      
Sbjct: 546 WTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMY 605

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            + G+   +     ++ +   +G LS  ++    MP + D + W + +GA
Sbjct: 606 TEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGA 655



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 189/383 (49%), Gaps = 11/383 (2%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM-PEHD 422
           L  C       +G  +H +  +  L  D    N+L+SLY+  G   +   +F LM    D
Sbjct: 73  LKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRD 132

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
            +SW++++  FA++  +   A+  ++DM   G+ PN   F     A S+     +G  + 
Sbjct: 133 LISWSAMVSCFANNN-MGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIF 191

Query: 483 AQVIKYN-VANETTIENALLSCYGKC-GEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
             V+K   + ++  +   L+  + K  G++    K+F +M E R+ V+W  MI+  +   
Sbjct: 192 GFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPE-RNAVTWTLMITRLMQFG 250

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
              +A++L   M+  G   D FT + V+SACA++  L  G ++H+  +R  L  D  +G 
Sbjct: 251 YAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGC 310

Query: 601 ALVDMYSKC---GRIDYASRFFDLMPVRNVYSWNSMISGYARH-GHGDKALTLFSQMKLD 656
            L++MY+KC   G +  A + FD +   NV+SW +MI+GY +  G+ ++AL LF  M L 
Sbjct: 311 CLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILT 370

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
             +P+H TF   L AC++   +  G + F    ++ G        + ++ +  R+G +D 
Sbjct: 371 HVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKL-GFSSVNCVANSLISMYARSGRIDD 429

Query: 717 IEEFINKMPITPNSLIWRTVLGA 739
             +  + +    N + + TV+ A
Sbjct: 430 ARKAFDIL-FEKNLISYNTVIDA 451



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 138/275 (50%), Gaps = 11/275 (4%)

Query: 442 EAVKYYLDMRRAGWSPNGVT---FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
           +A+     M   G  P+  T   F+       SF +G L   VH ++ + ++  ++   N
Sbjct: 49  KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTL---VHEKLTQSDLQLDSVTLN 105

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
           +L+S Y KCG+ +    IF  M   RD +SW++M+S + +N +  +A+     M++ G  
Sbjct: 106 SLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYY 165

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASR 617
            + + FA    AC++   +  G  +    V+   L+ DV +G  L+DM+ K GR D  S 
Sbjct: 166 PNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVK-GRGDLVSA 224

Query: 618 F--FDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
           F  F+ MP RN  +W  MI+   + G+  +A+ LF +M L G  PD  T  GV+SAC++ 
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANM 284

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
            L+  G +   S +  +GL        C++++  +
Sbjct: 285 ELLLLG-QQLHSQAIRHGLTLDRCVGCCLINMYAK 318



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 17/210 (8%)

Query: 537 IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
           I+N  L KA++ +  M+ +G   D  T++  L  C    + + G  VH    ++ L+ D 
Sbjct: 42  INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLM-PVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
           V  ++L+ +YSKCG+ + A+  F LM   R++ SW++M+S +A +  G +AL  F  M  
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161

Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ---LEQFSC----MVDLL 708
           +G  P+   F     ACS A  V  G         ++G + +   L+   C    ++D+ 
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVG-------DSIFGFVVKTGYLQSDVCVGCGLIDMF 214

Query: 709 GRA-GELDKIEEFINKMPITPNSLIWRTVL 737
            +  G+L    +   KMP   N++ W  ++
Sbjct: 215 VKGRGDLVSAFKVFEKMP-ERNAVTWTLMI 243


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 295/756 (39%), Positives = 442/756 (58%), Gaps = 47/756 (6%)

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE---- 277
           + K G   DL+  + L++ +   G    A K+F++M   N VS   L +G  +  +    
Sbjct: 29  ILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRA 88

Query: 278 -------------------------------------VHGYLIRSGLFDMVAVGNGLVNM 300
                                                VH Y+ + G      VG  L++ 
Sbjct: 89  RRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDA 148

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           Y+ CG +D +R VF  +  KD VSW  M++   +N C+E++++ FC MR  G   +NF++
Sbjct: 149 YSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTI 208

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
            + L SC  L    +G+ +HG  LK+  D D+ V  ALL LY  +G ++   + F  MP+
Sbjct: 209 SAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPK 268

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS-PNGVTFINILAAASSFSMGKLGH 479
            D + W+ +I  +A S+    EA++ +  MR++    PN  TF ++L A +S  +  LG+
Sbjct: 269 DDLIPWSLMISRYAQSDK-SKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGN 327

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           Q+H+ V+K  + +   + NAL+  Y KCGE+++  K+F   +E+ +EV+WN++I GY+  
Sbjct: 328 QIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEK-NEVAWNTIIVGYVQL 386

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
               KA+NL   M+    +    T+++VL A AS+  LE G ++H+  ++     D V+ 
Sbjct: 387 GDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVA 446

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           ++L+DMY+KCGRID A   FD M  ++  SWN++I GY+ HG G +AL LF  M+     
Sbjct: 447 NSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSK 506

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           P+ +TFVGVLSACS+AGL+D+G  HFKSM Q YG+ P +E ++CMV LLGR+G+ D+  +
Sbjct: 507 PNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVK 566

Query: 720 FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASG 779
            I ++P  P+ ++WR +LGAC     +  +LG+  A  + EMEPQ+   +VLL+NMYA+ 
Sbjct: 567 LIGEIPFQPSVMVWRALLGACVIH--KNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATA 624

Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
            +W++VA  RK MK+ +VKKE G SWV  +  VH F  GD SHP   LI+  L+ L +K 
Sbjct: 625 KRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKT 684

Query: 840 RDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR-NSKLPIRIMKNLRVCGDCH 898
           RDAGYVP     L D+E + KE L+  HSE++A+AF L +  S   IRI+KNLR+C DCH
Sbjct: 685 RDAGYVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVDCH 744

Query: 899 SAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +  K +SKIV REIV+RD NRFHHF  G CSCGDYW
Sbjct: 745 AVIKLVSKIVQREIVIRDINRFHHFRQGVCSCGDYW 780



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 167/589 (28%), Positives = 291/589 (49%), Gaps = 67/589 (11%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G  +HC +LK   + D    N+L+  Y       D A ++F+E+   + +S+ ++   +S
Sbjct: 22  GKSLHCHILKHGASLDLFAQNILLNTYVHFGFLED-ASKLFDEMPLTNTVSFVTLAQGFS 80

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
           +        +L  R+ REG+    + N++ F +L+    S  L+ + L   + A V K G
Sbjct: 81  RSHQFQRARRLLLRLFREGY----EVNQFVFTTLLKLLVSMDLADTCL--SVHAYVYKLG 134

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL------------------ 268
             +D +VG+AL+  ++  GN   AR++F+ +  K++VS  G+                  
Sbjct: 135 HQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFC 194

Query: 269 -----------------------MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
                                  +E  + GK VHG  ++      + VG  L+ +Y K G
Sbjct: 195 QMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSG 254

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG-LMSSNFSLISTL 364
            I +++  F  M   D + W+ MIS   Q+   +EA+  FC MR+   ++ +NF+  S L
Sbjct: 255 EIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVL 314

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +CASL  + LG QIH   LK+GLDS+V VSNAL+ +YA  G +   +K+F    E ++V
Sbjct: 315 QACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEV 374

Query: 425 SWNSVIGAF---ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           +WN++I  +    D E    +A+  + +M      P  VT+ ++L A++S    + G Q+
Sbjct: 375 AWNTIIVGYVQLGDGE----KALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQI 430

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H+  IK     ++ + N+L+  Y KCG +DD    F +M +++DEVSWN++I GY  + L
Sbjct: 431 HSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKM-DKQDEVSWNALICGYSIHGL 489

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-----VHACGVRACLEFDV 596
             +A+NL   M Q   + +  TF  VLSAC++   L++G       +   G+  C+E   
Sbjct: 490 GMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEH-- 547

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGD 644
              + +V +  + G+ D A +    +P + +V  W +++     H + D
Sbjct: 548 --YTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLD 594



 Score =  202 bits (515), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 160/585 (27%), Positives = 274/585 (46%), Gaps = 62/585 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  ILKHG + D+F  N L+N YV  G L  ASKLFDEMP  N+VS+  +  G++  
Sbjct: 23  KSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRS 82

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
                A ++   + R G+ +N++   ++L+       +     + VH  V K     D  
Sbjct: 83  HQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLA--DTCLSVHAYVYKLGHQADAF 140

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V   LI  Y  C  + D AR++F+ I  +D++SW  +++ Y++         LF +M+  
Sbjct: 141 VGTALIDAYSVC-GNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIM 199

Query: 185 GFRYSLKPNEYTFGSLITAAYSSV--LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           G+R    PN +T    I+AA  S   L    + + +     K     DLYVG AL+  + 
Sbjct: 200 GYR----PNNFT----ISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYT 251

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---------------------------- 274
           + G    A++ FE+M + +++  + LM  R                              
Sbjct: 252 KSGEIAEAQQFFEEMPKDDLIPWS-LMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTF 310

Query: 275 ---------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                          G ++H  +++ GL   V V N L+++YAKCG I++S  +F     
Sbjct: 311 ASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTE 370

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           K+ V+WNT+I G  Q G  E+A+  F  M    +  +  +  S L + ASL  +  G+QI
Sbjct: 371 KNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQI 430

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           H   +K   + D  V+N+L+ +YA  G +      F  M + D+VSWN++I  ++    L
Sbjct: 431 HSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYS-IHGL 489

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN- 498
             EA+  +  M+++   PN +TF+ +L+A S+  +   G + H + +  +   E  IE+ 
Sbjct: 490 GMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKG-RAHFKSMLQDYGIEPCIEHY 548

Query: 499 -ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
             ++   G+ G+ D+  K+   +  +   + W +++    IH  L
Sbjct: 549 TCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNL 593



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 241/494 (48%), Gaps = 12/494 (2%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK +H ++++ G    +   N L+N Y   G ++D+  +F  M   ++VS+ T+  G  +
Sbjct: 22  GKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSR 81

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +  ++ A      + R+G   + F   + L    S+        +H    KLG  +D  V
Sbjct: 82  SHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFV 141

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             AL+  Y+  G +    +VF  +   D VSW  ++  +A++     +++  +  MR  G
Sbjct: 142 GTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCH-EDSLLLFCQMRIMG 200

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
           + PN  T    L + +     K+G  VH   +K     +  +  ALL  Y K GE+ + +
Sbjct: 201 YRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQ 260

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL-DHFTFATVLSACAS 573
           + F  M  + D + W+ MIS Y  ++   +A+ L   M Q    + ++FTFA+VL ACAS
Sbjct: 261 QFFEEMP-KDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACAS 319

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           +  L  G ++H+C ++  L+ +V + +AL+D+Y+KCG I+ + + F     +N  +WN++
Sbjct: 320 LVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTI 379

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK-HFKSMSQVY 692
           I GY + G G+KAL LFS M      P  VT+  VL A +    ++ G + H  ++  +Y
Sbjct: 380 IVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMY 439

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
                +   + ++D+  + G +D      +KM    + + W  ++   C  +     LG 
Sbjct: 440 NKDSVVA--NSLIDMYAKCGRIDDARLTFDKMD-KQDEVSWNALI---CGYSIHG--LGM 491

Query: 753 KAANMLFEMEPQNA 766
           +A N+   M+  N+
Sbjct: 492 EALNLFDMMQQSNS 505



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 174/357 (48%), Gaps = 29/357 (8%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H   LK  +  D+++   L+ +Y + G++A A + F+EMP  + + W+ ++S Y
Sbjct: 222 KVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRY 281

Query: 62  THKGMSNEACKMFKEMVRAGFLL-NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
                S EA ++F  M ++  ++ N +   SVL+AC          G Q+H  VLK    
Sbjct: 282 AQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASL--VLLNLGNQIHSCVLKVGLD 339

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            +  VSN L+ +Y  C E  + + ++F     ++ ++WN+II  Y Q GD      LFS 
Sbjct: 340 SNVFVSNALMDVYAKCGEIEN-SVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSN 398

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M        ++P E T+ S++ A+ S V       +QI ++  K     D  V ++L+  
Sbjct: 399 M----LGLDIQPTEVTYSSVLRASASLVALEPG--RQIHSLTIKTMYNKDSVVANSLIDM 452

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS-GLFDMVAVGN---- 295
           +A+ G    AR  F++M +++ VS N L+     G  +HG  + +  LFDM+   N    
Sbjct: 453 YAKCGRIDDARLTFDKMDKQDEVSWNALI----CGYSIHGLGMEALNLFDMMQQSNSKPN 508

Query: 296 -----GLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAI 342
                G+++  +  G +D  R+ F+ M+    +      +  M+  L ++G ++EA+
Sbjct: 509 KLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAV 565



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 139/281 (49%), Gaps = 17/281 (6%)

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           ++ N+L  A        G  +H  ++K+  + +   +N LL+ Y   G ++D  K+F  M
Sbjct: 5   SYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEM 64

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
               + VS+ ++  G+  +    +A  L+  + + G  ++ F F T+L    S+   +  
Sbjct: 65  P-LTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTC 123

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
           + VHA   +   + D  +G+AL+D YS CG +D A + FD +  +++ SW  M++ YA +
Sbjct: 124 LSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAEN 183

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ--- 697
              + +L LF QM++ G  P++ T    L +C+       G + FK    V+G   +   
Sbjct: 184 YCHEDSLLLFCQMRIMGYRPNNFTISAALKSCN-------GLEAFKVGKSVHGCALKVCY 236

Query: 698 ---LEQFSCMVDLLGRAGELDKIEEFINKMP---ITPNSLI 732
              L     +++L  ++GE+ + ++F  +MP   + P SL+
Sbjct: 237 DRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLM 277


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 289/722 (40%), Positives = 443/722 (61%), Gaps = 21/722 (2%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQ----KNVVSMNGLM------EGRRKGKEVH 279
           DL   SAL+S +A     + A   F  M++     N     G+       E    GK + 
Sbjct: 6   DLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIF 65

Query: 280 GYLIRSGLFDM-VAVGNGLVNMYAKC-GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           G+L+++G F+  V VG  L++M+ K  G ++ +  VF  M  ++ V+W  MI+   Q G 
Sbjct: 66  GFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGF 125

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
             +A+  F  M   G +   F+L   +S+CA +G + LG+Q H   +K GLD DV V  +
Sbjct: 126 SRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCS 185

Query: 398 LLSLYADA---GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           L+ +YA     G +    KVF  MP H+ +SW ++I  +  S     EA++ +L+M +  
Sbjct: 186 LVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQ 245

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             PN  TF ++L A ++ S   LG QV+A V+K  +A+   + N+L+S Y +CG M++  
Sbjct: 246 VKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENAR 305

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           K F  + E+ + VS+N++++ Y  +    +A  L   +   G  ++ FTFA++LS  +S+
Sbjct: 306 KAFDVLFEK-NLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSI 364

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
             + +G ++H+  +++  + ++ I +AL+ MYS+CG I+ A + F+ M   NV SW SMI
Sbjct: 365 GAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMI 424

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
           +G+A+HG   +AL  F +M   G  P+ VT++ VLSACSH GL+ EG KHFKSM   +G+
Sbjct: 425 TGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGI 484

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
           +P++E ++C+VDLLGR+G L++  E +N MP   ++L+ RT LGA CR +    +LG+ A
Sbjct: 485 VPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGA-CRVH-GNMDLGKHA 542

Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
           A M+ E +P +   Y+LL+N++AS G+WE+VA+ RK MKE  + KEAGCSW+ +++ VH 
Sbjct: 543 AEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHK 602

Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVA 874
           F  GD SHP+   IY++L +L  K+++ GY+P T F L D+E E KE  +  HSEKIAVA
Sbjct: 603 FYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIAVA 662

Query: 875 --FVLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
             F+ T  S+ PIR+ KNLRVCGDCH+AFK+ S +  +EIVLRD+NRFHHF DG CSC D
Sbjct: 663 YGFISTSTSR-PIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDGTCSCND 721

Query: 933 YW 934
           YW
Sbjct: 722 YW 723



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 144/471 (30%), Positives = 244/471 (51%), Gaps = 58/471 (12%)

Query: 11  ILKHG-FAYDVFLCNTLINVYVR-VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSN 68
           +LK G F  DV +   LI+++V+  GDL SA K+FD MPDRN V+W  +++ +   G S 
Sbjct: 68  LLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSR 127

Query: 69  EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV 128
           +A  +F +MV +G++ +R+ L  V+ AC E G      G Q HCLV+KS    D  V   
Sbjct: 128 DAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGL--LSLGRQFHCLVMKSGLDLDVCVGCS 185

Query: 129 LIAMYGSCLE--STDCARRIFEEIETRDLISWNSIISVYSQRGD-TISVFKLFSRMQREG 185
           L+ MY  C+   S D AR++F+ +   +++SW +II+ Y Q G       +LF  M    
Sbjct: 186 LVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEM---- 241

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
            +  +KPN +TF S++ A  +  LS  +L +Q+ A+V K  L S   VG++L+S ++R G
Sbjct: 242 VQGQVKPNHFTFSSVLKACAN--LSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCG 299

Query: 246 NFYYARKIFEQMIQKNVVSMNGL-------------------MEGR-------------- 272
           N   ARK F+ + +KN+VS N +                   +EG               
Sbjct: 300 NMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLS 359

Query: 273 --------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                    KG+++H  +++SG    + + N L++MY++CG I+ +  VF  M   + +S
Sbjct: 360 GASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVIS 419

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W +MI+G  ++G    A+  F  M   G+  +  + I+ LS+C+ +G I  G + H + +
Sbjct: 420 WTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLK-HFKSM 478

Query: 385 KL--GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           K+  G+   +     ++ L   +G+L   +++   MP + D +   + +GA
Sbjct: 479 KVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGA 529



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 221/424 (52%), Gaps = 10/424 (2%)

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           +D VSW+ +IS    N    EAI  F  M   G   + +       +C++   I LG+ I
Sbjct: 5   RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64

Query: 380 HGEGLKLG-LDSDVSVSNALLSLYADA-GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
            G  LK G  +SDV V  AL+ ++    G L    KVF  MP+ + V+W  +I  F    
Sbjct: 65  FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRF-QQL 123

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
               +AV  +LDM  +G+ P+  T   +++A +   +  LG Q H  V+K  +  +  + 
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183

Query: 498 NALLSCYGKC---GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK-AMNLVWFMM 553
            +L+  Y KC   G +DD  K+F RM    + +SW ++I+GY+ +    + A+ L   M+
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMP-VHNVMSWTAIITGYVQSGGCDREAIELFLEMV 242

Query: 554 QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID 613
           Q   + +HFTF++VL ACA+++ +  G +V+A  V+  L     +G++L+ MYS+CG ++
Sbjct: 243 QGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNME 302

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
            A + FD++  +N+ S+N++++ YA+  + ++A  LF++++  G   +  TF  +LS  S
Sbjct: 303 NARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGAS 362

Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
             G + +G +   S     G    L   + ++ +  R G ++   +  N+M    N + W
Sbjct: 363 SIGAIGKG-EQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMG-DGNVISW 420

Query: 734 RTVL 737
            +++
Sbjct: 421 TSMI 424



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 136/525 (25%), Positives = 246/525 (46%), Gaps = 58/525 (11%)

Query: 49  RNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGM 108
           R+ VSW+ ++S Y +   + EA   F +M+  GF  N Y    V RAC          G 
Sbjct: 5   RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACS--NKENISLGK 62

Query: 109 QVHCLVLKSNQ-TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQ 167
            +   +LK+     D  V   LI M+       + A ++F+ +  R++++W  +I+ + Q
Sbjct: 63  IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQ 122

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAG 226
            G +     LF  M   G+     P+ +T   +++A A   +LS   L +Q   +V K+G
Sbjct: 123 LGFSRDAVDLFLDMVLSGY----VPDRFTLSGVVSACAEMGLLS---LGRQFHCLVMKSG 175

Query: 227 LLSDLYVGSALVSGFARL---GNFYYARKIFEQMIQKNVVSMNGLMEGRRK--------- 274
           L  D+ VG +LV  +A+    G+   ARK+F++M   NV+S   ++ G  +         
Sbjct: 176 LDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAI 235

Query: 275 ---------------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMY 301
                                            G++V+  +++  L  +  VGN L++MY
Sbjct: 236 ELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMY 295

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
           ++CG ++++R  F  +  K+ VS+NT+++   ++   EEA   F  +   G   + F+  
Sbjct: 296 SRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFA 355

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S LS  +S+G I  G+QIH   LK G  S++ + NAL+S+Y+  G +    +VF  M + 
Sbjct: 356 SLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDG 415

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQ 480
           + +SW S+I  FA      + A++ +  M  AG SPN VT+I +L+A S   +   G   
Sbjct: 416 NVISWTSMITGFA-KHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKH 474

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
             +  +++ +         ++   G+ G +++  ++   M  + D
Sbjct: 475 FKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKAD 519



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 135/273 (49%), Gaps = 14/273 (5%)

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           M  +RD VSW+++IS Y +NE   +A++  + M++ G   + + F  V  AC++   +  
Sbjct: 1   MGNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISL 60

Query: 580 GMEVHACGVRA-CLEFDVVIGSALVDMYSKC-GRIDYASRFFDLMPVRNVYSWNSMISGY 637
           G  +    ++    E DV +G AL+DM+ K  G ++ A + FD MP RNV +W  MI+ +
Sbjct: 61  GKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRF 120

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
            + G    A+ LF  M L G +PD  T  GV+SAC+  GL+  G + F  +    GL   
Sbjct: 121 QQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLG-RQFHCLVMKSGLDLD 179

Query: 698 LEQFSCMVDLLGRA---GELDKIEEFINKMPITPNSLIWRTVL-GACCRANCRKTELGRK 753
           +     +VD+  +    G +D   +  ++MP+  N + W  ++ G      C      R+
Sbjct: 180 VCVGCSLVDMYAKCVADGSVDDARKVFDRMPV-HNVMSWTAIITGYVQSGGC-----DRE 233

Query: 754 AANMLFEM-EPQNAVNYVLLANMYASGGKWEDV 785
           A  +  EM + Q   N+   +++  +     D+
Sbjct: 234 AIELFLEMVQGQVKPNHFTFSSVLKACANLSDI 266



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 56/93 (60%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H +ILK GF  ++ +CN LI++Y R G++ +A ++F+EM D N +SW  +++G+   G +
Sbjct: 374 HSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFA 433

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
             A + F +M+ AG   N     +VL AC   G
Sbjct: 434 TRALETFHKMLEAGVSPNEVTYIAVLSACSHVG 466


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 296/761 (38%), Positives = 449/761 (59%), Gaps = 24/761 (3%)

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
           L+ +  T  SLI     S+ S     ++  ++ +  G   DL   SA+VS FA     + 
Sbjct: 97  LQLDSVTLNSLI-----SLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFR 151

Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRK----------GKEVHGYLIRSGLFDM-VAVGNGLV 298
           A   F  MI+              +          G  + G++I++G     V VG GL+
Sbjct: 152 ALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLI 211

Query: 299 NMYAKC-GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           +M+ K  G +  +  VF  M  +++V+W  MI+ L Q G   EAI  F  M   G     
Sbjct: 212 DMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDR 271

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA---GYLSRCLKV 414
           F+L   +S+CA++  ++LGQQ+H + ++ GL  D  V   L+++YA     G +    K+
Sbjct: 272 FTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKI 331

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  + +H+  SW ++I  +        EA+  +  M      PN  TF + L A ++ + 
Sbjct: 332 FDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAA 391

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            ++G QV    +K   ++   + N+L+S Y + G +DD  K F  + E+ + +S+N++I 
Sbjct: 392 LRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEK-NLISYNTVID 450

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
            Y  N    +A+ L   +  +G     FTFA++LS  AS+ T+ +G ++HA  +++ L+ 
Sbjct: 451 AYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKL 510

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           +  + +AL+ MYS+CG I+ A + F+ M  RNV SW S+I+G+A+HG   +AL LF +M 
Sbjct: 511 NQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKML 570

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
            +G  P+ VT++ VLSACSH GLV+EG+KHFKSM   +G+IP++E ++C+VD+LGR+G L
Sbjct: 571 EEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSL 630

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
            +  +FIN MP   ++L+WRT LGA CR +    ELG+ AA M+ E EP +   Y+LL+N
Sbjct: 631 SEAIQFINSMPYKADALVWRTFLGA-CRVH-GNLELGKHAAKMIIEQEPHDPAAYILLSN 688

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           +YAS  KW++V+  RKAMKE  + KEAGCSWV +++ VH F  GD SHP+   IY++L+ 
Sbjct: 689 LYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQN 748

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKL-PIRIMKNLRV 893
           L+ K++  GYVP   F L D+E E KE L+  HSEKIAVAF L   SK+ PIR+ KNLR+
Sbjct: 749 LSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRI 808

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CGDCHSA K+IS   GREI++RD+NRFHH  DG+CSC +YW
Sbjct: 809 CGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 152/580 (26%), Positives = 259/580 (44%), Gaps = 65/580 (11%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEM-PDRNSVSWACIVSGYTHK 64
           L H ++ +     D    N+LI++Y + G    A+ +F  M   R+ +SW+ +VS + + 
Sbjct: 87  LVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANN 146

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQ-----ECGPSGFKFGMQVHCLVLKSNQ 119
            M   A   F +M+  G+  N Y   +  RAC        G S F F ++   L      
Sbjct: 147 NMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYL------ 200

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D  V   LI M+         A ++FE++  R+ ++W  +I+   Q G       LF 
Sbjct: 201 QSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFL 260

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            M   G+    +P+ +T   +I+A  +  L    L QQ+ +   + GL  D  VG  L++
Sbjct: 261 DMIFSGY----EPDRFTLSGVISACANMEL--LLLGQQLHSQAIRHGLTLDRCVGCCLIN 314

Query: 240 GFARL---GNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------ 272
            +A+    G+   ARKIF+Q++  NV S   ++ G                         
Sbjct: 315 MYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIP 374

Query: 273 ------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                             R G++V  + ++ G   +  V N L++MYA+ G IDD+R  F
Sbjct: 375 NHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAF 434

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             +  K+ +S+NT+I    +N   EEA+  F  +   G+ +S F+  S LS  AS+G I 
Sbjct: 435 DILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIG 494

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
            G+QIH   +K GL  + SV NAL+S+Y+  G +    +VF  M + + +SW S+I  FA
Sbjct: 495 KGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFA 554

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANE 493
                 ++A++ +  M   G  PN VT+I +L+A S   +   G     +   ++ V   
Sbjct: 555 -KHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPR 613

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
                 ++   G+ G + +  +    M  + D + W + +
Sbjct: 614 MEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFL 653



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 231/470 (49%), Gaps = 56/470 (11%)

Query: 11  ILKHGF-AYDVFLCNTLINVYVR-VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSN 68
           ++K G+   DV +   LI+++V+  GDL SA K+F++MP+RN+V+W  +++     G + 
Sbjct: 194 VIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAG 253

Query: 69  EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV 128
           EA  +F +M+ +G+  +R+ L  V+ AC          G Q+H   ++   T D  V   
Sbjct: 254 EAIDLFLDMIFSGYEPDRFTLSGVISACANM--ELLLLGQQLHSQAIRHGLTLDRCVGCC 311

Query: 129 LIAMYGSC-LESTDC-ARRIFEEIETRDLISWNSIISVYSQRGD-TISVFKLFSRMQREG 185
           LI MY  C ++ + C AR+IF++I   ++ SW ++I+ Y Q+G        LF  M    
Sbjct: 312 LINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGM---- 367

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
               + PN +TF S + A  +  L+   + +Q+     K G  S   V ++L+S +AR G
Sbjct: 368 ILTHVIPNHFTFSSTLKACAN--LAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSG 425

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRR-------------------------------- 273
               ARK F+ + +KN++S N +++                                   
Sbjct: 426 RIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLS 485

Query: 274 ---------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                    KG+++H  +I+SGL    +V N L++MY++CG I+ +  VF  M  ++ +S
Sbjct: 486 GAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVIS 545

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEG 383
           W ++I+G  ++G   +A+  F  M  +G+  +  + I+ LS+C+ +G +  G +      
Sbjct: 546 WTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMY 605

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            + G+   +     ++ +   +G LS  ++    MP + D + W + +GA
Sbjct: 606 TEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGA 655



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 189/383 (49%), Gaps = 11/383 (2%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM-PEHD 422
           L  C       +G  +H +  +  L  D    N+L+SLY+  G   +   +F LM    D
Sbjct: 73  LKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRD 132

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
            +SW++++  FA++  +   A+  ++DM   G+ PN   F     A S+     +G  + 
Sbjct: 133 LISWSAMVSCFANNN-MGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIF 191

Query: 483 AQVIKYN-VANETTIENALLSCYGKC-GEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
             VIK   + ++  +   L+  + K  G++    K+F +M E R+ V+W  MI+  +   
Sbjct: 192 GFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPE-RNAVTWTLMITRLMQFG 250

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
              +A++L   M+  G   D FT + V+SACA++  L  G ++H+  +R  L  D  +G 
Sbjct: 251 YAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGC 310

Query: 601 ALVDMYSKC---GRIDYASRFFDLMPVRNVYSWNSMISGYARH-GHGDKALTLFSQMKLD 656
            L++MY+KC   G +  A + FD +   NV+SW +MI+GY +  G+ ++AL LF  M L 
Sbjct: 311 CLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILT 370

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
             +P+H TF   L AC++   +  G + F    ++ G        + ++ +  R+G +D 
Sbjct: 371 HVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKL-GFSSVNCVANSLISMYARSGRIDD 429

Query: 717 IEEFINKMPITPNSLIWRTVLGA 739
             +  + +    N + + TV+ A
Sbjct: 430 ARKAFDIL-FEKNLISYNTVIDA 451



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 11/275 (4%)

Query: 442 EAVKYYLDMRRAGWSPNGVT---FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
           +A+     M   G  P+  T   F+       SF +G L   VH ++ + ++  ++   N
Sbjct: 49  KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTL---VHEKLTQSDLQLDSVTLN 105

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
           +L+S Y KCG+ +    IF  M   RD +SW++M+S + +N +  +A+     M++ G  
Sbjct: 106 SLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYY 165

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASR 617
            + + FA    AC++   +  G  +    ++   L+ DV +G  L+DM+ K GR D  S 
Sbjct: 166 PNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVK-GRGDLVSA 224

Query: 618 F--FDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
           F  F+ MP RN  +W  MI+   + G+  +A+ LF  M   G  PD  T  GV+SAC++ 
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANM 284

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
            L+  G +   S +  +GL        C++++  +
Sbjct: 285 ELLLLG-QQLHSQAIRHGLTLDRCVGCCLINMYAK 318



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 17/210 (8%)

Query: 537 IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
           I+N  L KA++ +  M+ +G   D  T++  L  C    + + G  VH    ++ L+ D 
Sbjct: 42  INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLM-PVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
           V  ++L+ +YSKCG+ + A+  F LM   R++ SW++M+S +A +  G +AL  F  M  
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161

Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ---LEQFSC----MVDLL 708
           +G  P+   F     ACS A  V  G         ++G + +   L+   C    ++D+ 
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVG-------DSIFGFVIKTGYLQSDVCVGCGLIDMF 214

Query: 709 GRA-GELDKIEEFINKMPITPNSLIWRTVL 737
            +  G+L    +   KMP   N++ W  ++
Sbjct: 215 VKGRGDLVSAFKVFEKMP-ERNAVTWTLMI 243


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 290/762 (38%), Positives = 432/762 (56%), Gaps = 47/762 (6%)

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR-- 272
           L QI+ +V K GL ++    + LVS F++ G+   A ++FE +  K     + +++G   
Sbjct: 65  LHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAK 124

Query: 273 ---------------------------------------RKGKEVHGYLIRSGLFDMVAV 293
                                                  ++GKE+HG LI +     V  
Sbjct: 125 NSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFA 184

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
             G+VNMYAKC  IDD+  +F  M  +D VSWNT+I+G  QNG  ++A+     M+ +G 
Sbjct: 185 MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQ 244

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
              + +L++ L + A +G +M+G+ IHG  ++ G    V++S AL  +Y+  G +     
Sbjct: 245 RPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARL 304

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           +F  M +   VSWNS++  +  +     +A+  +  M   G  P GVT +  L A +   
Sbjct: 305 IFDGMDQKTVVSWNSMMDGYVQN-GEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLG 363

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
             + G  VH  V + N+ ++ ++ N+L+S Y KC  +D    IF  ++ R   VSWN+MI
Sbjct: 364 DLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRT-HVSWNAMI 422

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
            GY  N  + +A+N    M   G + D FT  +V+ A A ++       +H   +R+CL+
Sbjct: 423 LGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLD 482

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
            ++ + +ALVDMYSKCG I  A + FD++  R+V +WN+MI GY  HG G  AL LF +M
Sbjct: 483 KNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKM 542

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGE 713
           K     P+ +T++ V+SACSH+GLVDEG +HFKSM Q YGL P ++ +  MVDLLGRAG 
Sbjct: 543 KKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGR 602

Query: 714 LDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLA 773
           + +  +FI  MPI+P   ++    GAC     +  E+G KAA  LFE+ P     +VLLA
Sbjct: 603 IKEAWDFIENMPISPGITVYGAXXGAC--KIHKNIEVGEKAAKKLFELNPDEGGYHVLLA 660

Query: 774 NMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLK 833
           N+YAS  KW  VA+ RK M++  +KK  GCS V +++ VH F +G  +HP+   IY  L+
Sbjct: 661 NIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLE 720

Query: 834 ELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLR 892
           EL  +++ AGYVP T   L D+E + +E L++ HSEK+A+AF L   S    I + KNLR
Sbjct: 721 ELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLR 779

Query: 893 VCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           VCGDCH+A K+IS + GREI++RD  RFHHF +G CSCGDYW
Sbjct: 780 VCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 205/463 (44%), Gaps = 57/463 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H Q++ + FA +VF    ++N+Y +   +  A K+FD MP+R+ VSW  I++G+
Sbjct: 164 KRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGF 223

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G + +A ++   M   G   +   L +VL A  + G      G  +H   +++    
Sbjct: 224 SQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGL--LMVGKSIHGYAIRAGFAK 281

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              +S  L  MY  C  S + AR IF+ ++ + ++SWNS++  Y Q G+      +F +M
Sbjct: 282 LVNISTALADMYSKC-GSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKM 340

Query: 182 QREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
             EG    + P   T    + A      +  G ++ +     V +  L SD+ V ++L+S
Sbjct: 341 LEEG----IDPTGVTIMEALHACADLGDLERGKFVHK----FVDQLNLGSDISVMNSLIS 392

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------------------------- 271
            +++      A  IF  +  +  VS N ++ G                            
Sbjct: 393 MYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFT 452

Query: 272 -------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                         R  K +HG +IRS L   + V   LV+MY+KCG I  +R +F  + 
Sbjct: 453 MVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMIS 512

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            +  ++WN MI G   +G    A+  F  M++  +  ++ + +S +S+C+  G +  G +
Sbjct: 513 DRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR 572

Query: 379 IHGEGLK--LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
            H + +K   GL+  +    A++ L   AG +         MP
Sbjct: 573 -HFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMP 614



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 125/267 (46%), Gaps = 8/267 (2%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  + +     D+ + N+LI++Y +   +  AS +F+ +  R  VSW  ++ GY   
Sbjct: 369 KFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQN 428

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G  +EA   F EM   G   + + + SV+ A  E   S  +    +H L+++S    +  
Sbjct: 429 GRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAEL--SVTRHAKWIHGLIIRSCLDKNIF 486

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V+  L+ MY  C  +   AR++F+ I  R +I+WN++I  Y   G   +   LF +M++ 
Sbjct: 487 VTTALVDMYSKC-GAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKG 545

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
               +++PN+ T+ S+I+A   S L     L+   +M +  GL   +    A+V    R 
Sbjct: 546 ----AVEPNDITYLSVISACSHSGLVDEG-LRHFKSMKQDYGLEPSMDHYGAMVDLLGRA 600

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG 271
           G    A    E M     +++ G   G
Sbjct: 601 GRIKEAWDFIENMPISPGITVYGAXXG 627



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 13/227 (5%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           ++ AK  H  I++     ++F+   L+++Y + G +  A KLFD + DR+ ++W  ++ G
Sbjct: 466 TRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDG 525

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKFGMQVHCLVLKSN 118
           Y   G+   A  +F +M +     N     SV+ AC   G    G +          KS 
Sbjct: 526 YGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRH--------FKSM 577

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
           +   GL  +  +  YG+ ++    A RI E  +  + +  +  I+VY        + K  
Sbjct: 578 KQDYGLEPS--MDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNI 635

Query: 179 SRMQREGFR-YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
              ++   + + L P+E  +  L+   Y+S    S + +    M KK
Sbjct: 636 EVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKK 682


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 327/935 (34%), Positives = 494/935 (52%), Gaps = 58/935 (6%)

Query: 46  MPD--RNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSG 103
           MPD  R   SW   +SG    G  + A  M + M   G  L+ +AL S++ AC+     G
Sbjct: 1   MPDDHRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERW-EEG 59

Query: 104 FKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS 163
              G  +H L  K+    +  +   L+ +YGS     D A+R+F E+  R+++SW +++ 
Sbjct: 60  RACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLD-AQRLFWEMPERNVVSWTALMV 118

Query: 164 VYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVK 223
             S  G        + RM+RE     +  N   F ++++   S  L       Q+ + V 
Sbjct: 119 ALSSNGHLEEALGYYRRMRRE----RIACNANAFATVVSLCGS--LEDEVAGLQVFSHVI 172

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM-----EG------- 271
            +GL   + V ++L+S    LG  + A K+F +M +++ VS N L+     EG       
Sbjct: 173 VSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFR 232

Query: 272 -----RRK-------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMY 301
                RR                          G  VH   +R+GL   + V N LVNMY
Sbjct: 233 VFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMY 292

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
           +  G + D+  +F  M  +D +SWNTMIS   QNG   +A+     +          +  
Sbjct: 293 SSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFS 352

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S L +C+S G +M G+ +H   L+L L  ++ V N+L+++Y     +    ++F LMP H
Sbjct: 353 SALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNH 412

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA-ASSFSMGKLGHQ 480
           D VS N +IG++A  E   ++A++ +  MRR     N +T +NIL +  SS  +   G  
Sbjct: 413 DVVSCNILIGSYAVLED-GTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLP 471

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +HA  I     ++  + N+L++ Y KCG+++    +F R+   R  VSWN+MI+  + + 
Sbjct: 472 LHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIIN-RSVVSWNAMIAANVQHG 530

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
              +++ L   M   G  LDH   A  +S+ AS+A+LE GM++H  G++  L  D  + +
Sbjct: 531 HGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVN 590

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           A +DMY KCG++D   +      +R    WN++ISGYAR+G+  +A   F  M   G  P
Sbjct: 591 AAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTP 650

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           D+VTFV +LSACSHAGLVD+G  ++ SMS V+G+ P ++   C+VD+LGR G   + E+F
Sbjct: 651 DYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKF 710

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           I  MP+ PN LIWR++L +      +  ++GRKAA  L E++P +   YVLL+N+YA+  
Sbjct: 711 IEDMPVLPNDLIWRSLLSS--SRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATSA 768

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
           +W DV + R  MK   + K   CSW+  K  V  F  GD SH   D IY KL E+  K+R
Sbjct: 769 RWSDVDRVRSHMKTINLNKIPACSWLKQKKEVSTFGIGDHSHKHADKIYMKLDEILLKLR 828

Query: 841 DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHS 899
           + GYV  T  AL D + E KE  +  HSEK+A+A+ ++T      +RI KNLRVC DCH 
Sbjct: 829 EVGYVADTSSALHDTDEEQKEQNLWNHSEKLALAYGLITVPEGCTVRIFKNLRVCADCHL 888

Query: 900 AFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            FK +S +  REIVLRD  RFHHF  G CSC D+W
Sbjct: 889 VFKLVSMVFDREIVLRDPYRFHHFKGGSCSCSDFW 923



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 196/739 (26%), Positives = 338/739 (45%), Gaps = 76/739 (10%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H    K G   +V++   L+++Y     +  A +LF EMP+RN VSW  ++   +  G 
Sbjct: 66  IHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGH 125

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA   ++ M R     N  A  +V+  C          G+QV   V+ S       V+
Sbjct: 126 LEEALGYYRRMRRERIACNANAFATVVSLCGSLEDE--VAGLQVFSHVIVSGLQRQVSVA 183

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI+M G+     D A ++F  +E RD +SWN+++S+YS  G     F++FS M+R G 
Sbjct: 184 NSLISMLGNLGRVHD-AEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGL 242

Query: 187 RYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
              L+ +  T  SLI+   SS  V  GS     + ++  + GL S + V +ALV+ ++  
Sbjct: 243 ---LRHDATTLCSLISVCASSDYVSYGS----GVHSLCLRTGLHSYIPVVNALVNMYSSA 295

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLM-----------------------EGRRK------- 274
           G    A  +F  M +++++S N ++                       EG  +       
Sbjct: 296 GKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSAL 355

Query: 275 -----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      G+ VH   ++  L   + VGN L+ MY KC +I+D+  +F+ M   D V
Sbjct: 356 GACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVV 415

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM-LGQQIHGE 382
           S N +I          +A+  F  MRR  +  +  ++++ L S  S   +   G  +H  
Sbjct: 416 SCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAY 475

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            +  G  SD  VSN+L+++YA  G L     VF  +     VSWN++I A         E
Sbjct: 476 TIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANV-QHGHGEE 534

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           ++K ++DMR  G   + +     +++++S +  + G Q+H   +K  + N++ + NA + 
Sbjct: 535 SLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMD 594

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            YGKCG+MD+  K+    + R  +  WN++ISGY       +A      M+  G+  D+ 
Sbjct: 595 MYGKCGKMDEMLKMLPDPAIRPQQC-WNTLISGYARYGYFKEAEETFKHMISVGRTPDYV 653

Query: 563 TFATVLSACASVATLERGMEVH---------ACGVRACLEFDVVIGSALVDMYSKCGRID 613
           TF T+LSAC+    +++G++ +         + G++ C+         +VD+  + GR  
Sbjct: 654 TFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCV--------CIVDILGRLGRFA 705

Query: 614 YASRFFDLMPV-RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD--HVTFVGVLS 670
            A +F + MPV  N   W S++S    H + D       ++    P  D  +V    + +
Sbjct: 706 EAEKFIEDMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYA 765

Query: 671 ACSHAGLVDEGFKHFKSMS 689
             +    VD    H K+++
Sbjct: 766 TSARWSDVDRVRSHMKTIN 784



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 31/283 (10%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D ++ H   L+    +++ + N+LI +Y +   +  A ++F  MP+ + VS   ++  Y 
Sbjct: 366 DGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYA 425

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                 +A ++F  M R    LN   + ++L +          +G+ +H   + +    D
Sbjct: 426 VLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLR-NYGLPLHAYTIHAGFLSD 484

Query: 123 GLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
             VSN LI MY  C  LES++    +F+ I  R ++SWN++I+   Q G      KLF  
Sbjct: 485 DYVSNSLITMYAKCGDLESSN---NVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMD 541

Query: 181 MQREGF---RYSLKPNEYTFGSLITAAYSSVLSG----------SYLLQQILAMVKKAGL 227
           M+ +G       L     +  SL +      L G          S+++   + M  K G 
Sbjct: 542 MRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGK 601

Query: 228 LSDLY------------VGSALVSGFARLGNFYYARKIFEQMI 258
           + ++               + L+SG+AR G F  A + F+ MI
Sbjct: 602 MDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMI 644


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 284/761 (37%), Positives = 441/761 (57%), Gaps = 46/761 (6%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK- 274
           +Q+   + + G+  ++Y+ + L+  +A  G+   AR++F++   K+VVS N ++ G    
Sbjct: 48  KQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHR 107

Query: 275 ----------------------------------------GKEVHGYLIRSGLFDMVAVG 294
                                                   G+E+H  ++ +GL +   VG
Sbjct: 108 GLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVG 167

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           N L++MYAKCG++ D+R VF  M  +D VSW T+     ++G  EE++  + AM ++ + 
Sbjct: 168 NALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVR 227

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
            S  + ++ LS+C SL  +  G+QIH   ++    SDV VS AL  +Y   G      +V
Sbjct: 228 PSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREV 287

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  +   D ++WN++I  F DS  L  EA   +  M   G +P+  T+  +L+A +    
Sbjct: 288 FECLSYRDVIAWNTMIRGFVDSGQL-EEAHGTFHRMLEEGVAPDRATYTTVLSACARPGG 346

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
              G ++HA+  K  + ++    NAL++ Y K G M D  ++F RM  +RD VSW +++ 
Sbjct: 347 LARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTTLLG 405

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
            Y   + + ++      M+Q+G + +  T+  VL AC++   L+ G E+HA  V+A L  
Sbjct: 406 RYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLA 465

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           D+ + +AL+ MY KCG ++ A R F+ M +R+V +WN++I G  ++G G +AL  +  MK
Sbjct: 466 DLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMK 525

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
            +G  P+  TFV VLSAC    LV+EG + F  MS+ YG++P  + ++CMVD+L RAG L
Sbjct: 526 SEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHL 585

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
            + E+ I  +P+ P++ +W  +L A CR +C   E+G +AA    ++EPQNA  YV L+ 
Sbjct: 586 REAEDVILTIPLKPSAAMWGALLAA-CRIHC-NVEIGERAAEHCLKLEPQNAGLYVSLSA 643

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           +YA+ G W DVAK RK MKE  VKKE G SW+ +   VH FVA D+SHP    IY +L+ 
Sbjct: 644 IYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELET 703

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRV 893
           L ++M+  GYVP T+F + DL+ E KE  V +HSEK+A+A+ +++     PIRI KNLRV
Sbjct: 704 LKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRV 763

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           C DCH+A KFISKI  REI+ RD++RFHHF +G+CSCGDYW
Sbjct: 764 CTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDYW 804



 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 161/496 (32%), Positives = 267/496 (53%), Gaps = 5/496 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK+VH +++R G+   V + N L+ +YA CG+++++R +F     K  VSWN MISG   
Sbjct: 47  GKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAH 106

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G  +EA   F  M+++ L    F+ +S LS+C+S   +  G++IH   ++ GL +D +V
Sbjct: 107 RGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTV 166

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            NAL+S+YA  G +    +VF  M   D+VSW ++ GA+A+S     E++K Y  M +  
Sbjct: 167 GNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAES-GYGEESLKTYHAMLQER 225

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             P+ +T++N+L+A  S +  + G Q+HA +++    ++  +  AL   Y KCG   D  
Sbjct: 226 VRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAR 285

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           ++F  +S  RD ++WN+MI G++ +  L +A      M++ G   D  T+ TVLSACA  
Sbjct: 286 EVFECLS-YRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARP 344

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
             L RG E+HA   +  L  DV  G+AL++MYSK G +  A + FD MP R+V SW +++
Sbjct: 345 GGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLL 404

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
             YA      ++ T F QM   G   + +T++ VL ACS+   +  G K   +     GL
Sbjct: 405 GRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWG-KEIHAEVVKAGL 463

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
           +  L   + ++ +  + G ++        M +  + + W T++G   + N R  E  ++ 
Sbjct: 464 LADLAVTNALMSMYFKCGSVEDAIRVFEGMSMR-DVVTWNTLIGGLGQ-NGRGLEALQRY 521

Query: 755 ANMLFEMEPQNAVNYV 770
             M  E    NA  +V
Sbjct: 522 EVMKSEGMRPNAATFV 537



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 154/573 (26%), Positives = 283/573 (49%), Gaps = 52/573 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  IL+ G   +V++ NTL+ +Y   G +  A +LFD+  +++ VSW  ++SGY H+
Sbjct: 48  KQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHR 107

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G++ EA  +F  M +     +++   S+L AC    P+   +G ++H  V+++    D  
Sbjct: 108 GLAQEAFNLFTLMQQERLEPDKFTFVSILSACS--SPAVLNWGREIHVRVMEAGLANDTT 165

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V N LI+MY  C    D ARR+F+ + +RD +SW ++   Y++ G      K +  M +E
Sbjct: 166 VGNALISMYAKCGSVRD-ARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQE 224

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
             R    P+  T+ ++++A  S  L+     +QI A + ++   SD+ V +AL   + + 
Sbjct: 225 RVR----PSRITYMNVLSACGS--LAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKC 278

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLME---------------------------------- 270
           G F  AR++FE +  ++V++ N ++                                   
Sbjct: 279 GAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVL 338

Query: 271 -------GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                  G  +GKE+H    + GL   V  GN L+NMY+K G++ D+R VF  M  +D V
Sbjct: 339 SACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVV 398

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SW T++          E+   F  M + G+ ++  + +  L +C++   +  G++IH E 
Sbjct: 399 SWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEV 458

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           +K GL +D++V+NAL+S+Y   G +   ++VF  M   D V+WN++IG    +   + EA
Sbjct: 459 VKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGL-EA 517

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLS 502
           ++ Y  M+  G  PN  TF+N+L+A    ++ + G +  A + K Y +         ++ 
Sbjct: 518 LQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVD 577

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
              + G + + E +   +  +     W ++++ 
Sbjct: 578 ILARAGHLREAEDVILTIPLKPSAAMWGALLAA 610



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 209/391 (53%), Gaps = 4/391 (1%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           + R G    ++  +  L SC     + +G+Q+H   L+ G+  +V ++N LL LYA  G 
Sbjct: 19  LHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGS 78

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           ++   ++F        VSWN +I  +A    L  EA   +  M++    P+  TF++IL+
Sbjct: 79  VNEARQLFDKFSNKSVVSWNVMISGYA-HRGLAQEAFNLFTLMQQERLEPDKFTFVSILS 137

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
           A SS ++   G ++H +V++  +AN+TT+ NAL+S Y KCG + D  ++F  M+  RDEV
Sbjct: 138 ACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMAS-RDEV 196

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           SW ++   Y  +    +++     M+Q   R    T+  VLSAC S+A LE+G ++HA  
Sbjct: 197 SWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHI 256

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
           V +    DV + +AL  MY KCG    A   F+ +  R+V +WN+MI G+   G  ++A 
Sbjct: 257 VESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAH 316

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDL 707
             F +M  +G  PD  T+  VLSAC+  G +  G K   + +   GL+  +   + ++++
Sbjct: 317 GTFHRMLEEGVAPDRATYTTVLSACARPGGLARG-KEIHARAAKDGLVSDVRFGNALINM 375

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
             +AG +    +  ++MP   + + W T+LG
Sbjct: 376 YSKAGSMKDARQVFDRMP-KRDVVSWTTLLG 405



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 102/194 (52%), Gaps = 4/194 (2%)

Query: 547 NLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMY 606
           +++ ++ ++G ++D + +  +L +C     L  G +VH   +R  ++ +V I + L+ +Y
Sbjct: 14  DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73

Query: 607 SKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFV 666
           + CG ++ A + FD    ++V SWN MISGYA  G   +A  LF+ M+ +   PD  TFV
Sbjct: 74  AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFV 133

Query: 667 GVLSACSHAGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
            +LSACS   +++ G + H + M    GL       + ++ +  + G +       + M 
Sbjct: 134 SILSACSSPAVLNWGREIHVRVMEA--GLANDTTVGNALISMYAKCGSVRDARRVFDAMA 191

Query: 726 ITPNSLIWRTVLGA 739
            + + + W T+ GA
Sbjct: 192 -SRDEVSWTTLTGA 204


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 273/626 (43%), Positives = 396/626 (63%), Gaps = 7/626 (1%)

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           VF  M  ++ V+W  MI+   Q GC  +AI  F  M   G +   F+  S LS+C  LG 
Sbjct: 12  VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 71

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA---GYLSRCLKVFFLMPEHDQVSWNSV 429
           + LG+Q+H   ++LGL  DV V  +L+ +YA     G +    KVF  MPEH+ +SW ++
Sbjct: 72  LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 131

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           I A+A S     EA++ +  M      PN  +F ++L A  + S    G QV++  +K  
Sbjct: 132 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 191

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV 549
           +A+   + N+L+S Y + G M+D  K F  + E+ + VS+N+++ GY  N    +A  L 
Sbjct: 192 IASVNCVGNSLISMYARSGRMEDARKAFDILFEK-NLVSYNAIVDGYAKNLKSEEAFLLF 250

Query: 550 WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
             +   G  +  FTFA++LS  AS+  + +G ++H   ++   + +  I +AL+ MYS+C
Sbjct: 251 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 310

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
           G I+ A + F+ M  RNV SW SMI+G+A+HG   +AL +F +M   G  P+ +T+V VL
Sbjct: 311 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 370

Query: 670 SACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPN 729
           SACSH G++ EG KHF SM + +G++P++E ++CMVDLLGR+G L +  EFIN MP+  +
Sbjct: 371 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMAD 430

Query: 730 SLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKAR 789
           +L+WRT+LGA CR +   TELGR AA M+ E EP +   Y+LL+N++AS G+W+DV K R
Sbjct: 431 ALVWRTLLGA-CRVH-GNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 488

Query: 790 KAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTK 849
           K+MKE  + KEAGCSW+ +++ VH F  G+ SHP+   IY++L +L  K+++ GY+P T 
Sbjct: 489 KSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTD 548

Query: 850 FALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIV 908
           F L D+E E KE  +  HSEKIAVAF L   S+  PIRI KNLRVCGDCH+A K+IS   
Sbjct: 549 FVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMAT 608

Query: 909 GREIVLRDSNRFHHFNDGKCSCGDYW 934
           GREIV+RDSNRFHH  +G CSC DYW
Sbjct: 609 GREIVVRDSNRFHHIKNGVCSCNDYW 634



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 218/442 (49%), Gaps = 54/442 (12%)

Query: 37  ASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRAC 96
           A A K+FD+MP+RN V+W  +++ +   G + +A  +F +M  +G++ +R+   SVL AC
Sbjct: 7   APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 66

Query: 97  QECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE--STDCARRIFEEIETRD 154
            E G      G Q+H  V++     D  V   L+ MY  C    S D +R++FE++   +
Sbjct: 67  TELGL--LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHN 124

Query: 155 LISWNSIISVYSQRGD-TISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY 213
           ++SW +II+ Y+Q G+      +LF +M        ++PN ++F S++ A  +  LS  Y
Sbjct: 125 VMSWTAIITAYAQSGECDKEAIELFCKM----ISGHIRPNHFSFSSVLKACGN--LSDPY 178

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR 273
             +Q+ +   K G+ S   VG++L+S +AR G    ARK F+ + +KN+VS N +++G  
Sbjct: 179 TGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 238

Query: 274 -----------------------------------------KGKEVHGYLIRSGLFDMVA 292
                                                    KG+++HG L++ G      
Sbjct: 239 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 298

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           + N L++MY++CG I+ +  VF  M  ++ +SW +MI+G  ++G    A+  F  M   G
Sbjct: 299 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 358

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSLYADAGYLSRC 411
              +  + ++ LS+C+ +G I  GQ+      K  G+   +     ++ L   +G L   
Sbjct: 359 TKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 418

Query: 412 LKVFFLMP-EHDQVSWNSVIGA 432
           ++    MP   D + W +++GA
Sbjct: 419 MEFINSMPLMADALVWRTLLGA 440



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 210/437 (48%), Gaps = 53/437 (12%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A ++F+++  R+L++W  +I+ ++Q G       LF  M+  G+     P+ +T+ S+++
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGY----VPDRFTYSSVLS 64

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL---GNFYYARKIFEQMIQ 259
           A   + L    L +Q+ + V + GL  D+ VG +LV  +A+    G+   +RK+FEQM +
Sbjct: 65  AC--TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE 122

Query: 260 KNVVSMNGLMEGRRK------------------------------------------GKE 277
            NV+S   ++    +                                          G++
Sbjct: 123 HNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQ 182

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           V+ Y ++ G+  +  VGN L++MYA+ G ++D+R  F  +  K+ VS+N ++ G  +N  
Sbjct: 183 VYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLK 242

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
            EEA + F  +   G+  S F+  S LS  AS+G +  G+QIHG  LK G  S+  + NA
Sbjct: 243 SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNA 302

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+S+Y+  G +    +VF  M + + +SW S+I  FA      + A++ +  M   G  P
Sbjct: 303 LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA-KHGFATRALEMFHKMLETGTKP 361

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKI 516
           N +T++ +L+A S   M   G +    + K + +         ++   G+ G + +  + 
Sbjct: 362 NEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEF 421

Query: 517 FARMSERRDEVSWNSMI 533
              M    D + W +++
Sbjct: 422 INSMPLMADALVWRTLL 438



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 206/440 (46%), Gaps = 38/440 (8%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRV---GDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  H ++++ G A DV +  +L+++Y +    G +  + K+F++MP+ N +SW  I++ Y
Sbjct: 76  KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 135

Query: 62  THKGMSN-EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
              G  + EA ++F +M+      N ++  SVL+AC     S    G QV+   +K    
Sbjct: 136 AQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNL--SDPYTGEQVYSYAVKLGIA 193

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
               V N LI+MY       D AR+ F+ +  ++L+S+N+I+  Y++   +   F LF+ 
Sbjct: 194 SVNCVGNSLISMYARSGRMED-ARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNE 252

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           +   G   S     +TF SL++ A S    G    +QI   + K G  S+  + +AL+S 
Sbjct: 253 IADTGIGIS----AFTFASLLSGAASIGAMGKG--EQIHGRLLKGGYKSNQCICNALISM 306

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS--GLFDMVAVGN--- 295
           ++R GN   A ++F +M  +NV+S   ++ G  K    HG+  R+      M+  G    
Sbjct: 307 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAK----HGFATRALEMFHKMLETGTKPN 362

Query: 296 -----GLVNMYAKCGTIDDSRSVFRFMIGKDSV-----SWNTMISGLDQNGCYEEAIMNF 345
                 +++  +  G I + +  F  M  +  +      +  M+  L ++G   EA+   
Sbjct: 363 EITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFI 422

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYAD 404
            +M    LM+      + L +C   G   LG+  H   + L  + D   +  LLS L+A 
Sbjct: 423 NSMP---LMADALVWRTLLGACRVHGNTELGR--HAAEMILEQEPDDPAAYILLSNLHAS 477

Query: 405 AGYLSRCLKVFFLMPEHDQV 424
           AG     +K+   M E + +
Sbjct: 478 AGQWKDVVKIRKSMKERNLI 497



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 5/128 (3%)

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
           A + FD MP RN+ +W  MI+ +A+ G    A+ LF  M+L G +PD  T+  VLSAC+ 
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 675 AGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRA---GELDKIEEFINKMPITPNSL 731
            GL+  G K   S     GL   +     +VD+  +    G +D   +   +MP   N +
Sbjct: 69  LGLLALG-KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVM 126

Query: 732 IWRTVLGA 739
            W  ++ A
Sbjct: 127 SWTAIITA 134


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 302/761 (39%), Positives = 420/761 (55%), Gaps = 47/761 (6%)

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRK- 274
           Q+ AM    G  SD++V +ALV+ +   G    AR++F++   ++N VS NGLM    K 
Sbjct: 28  QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 87

Query: 275 ----------------------------------------GKEVHGYLIRSGLFDMVAVG 294
                                                   G++VH  ++R G    V   
Sbjct: 88  DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTA 147

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           N LV+MY K G +D +  +F  M   D VSWN +ISG   NG    AI     M+  GL+
Sbjct: 148 NALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLV 207

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
            + F L S L +CA  G   LG+QIHG  +K   DSD  +   L+ +YA   +L   +KV
Sbjct: 208 PNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKV 267

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  M   D + WN++I   +       EA   +  +R+ G   N  T   +L + +S   
Sbjct: 268 FDWMSHRDLILWNALISGCSHG-GRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEA 326

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
                QVHA   K     +  + N L+  Y KC  + D  ++F   S   D ++  SMI+
Sbjct: 327 ASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSG-DIIAVTSMIT 385

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
                +    A+ L   M+++G   D F  +++L+ACAS++  E+G +VHA  ++     
Sbjct: 386 ALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMS 445

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           D   G+ALV  Y+KCG I+ A   F  +P R V SW++MI G A+HGHG +AL LF +M 
Sbjct: 446 DAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMV 505

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
            +G  P+H+T   VL AC+HAGLVDE  ++F SM +++G+    E +SCM+DLLGRAG+L
Sbjct: 506 DEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKL 565

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
           D   E +N MP   N+ +W  +LGA  R + +  ELG+ AA  LF +EP+ +  +VLLAN
Sbjct: 566 DDAMELVNSMPFQANASVWGALLGA-SRVH-KDPELGKLAAEKLFILEPEKSGTHVLLAN 623

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
            YAS G W +VAK RK MK++ +KKE   SWV +KD VH F+ GD+SHP    IY KL E
Sbjct: 624 TYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDE 683

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRV 893
           L   M  AGY+P     L DL+   KE L+S+HSE++AVAF +L+     PIR+ KNLR+
Sbjct: 684 LGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRI 743

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           C DCH AFKFIS IV REI++RD NRFHHF DG CSCGDYW
Sbjct: 744 CRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784



 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 178/626 (28%), Positives = 291/626 (46%), Gaps = 66/626 (10%)

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
           M   G   N +AL  VL+    C P   + G QVH + + +    D  V+N L+AMYG  
Sbjct: 1   MRAEGVCCNEFALPVVLK----CVPDA-QLGAQVHAMAMATGFGSDVFVANALVAMYGG- 54

Query: 137 LESTDCARRIFEEIET-RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
               D ARR+F+E  + R+ +SWN ++S Y +        ++F  M   G    ++P E+
Sbjct: 55  FGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG----IQPTEF 110

Query: 196 TFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKI 253
            F  ++ A   S  + +G    +Q+ AMV + G   D++  +ALV  + ++G    A  I
Sbjct: 111 GFSCVVNACTGSRNIDAG----RQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVI 166

Query: 254 FEQMIQKNVVSMNGLMEG-------RRK-------------------------------- 274
           FE+M   +VVS N L+ G        R                                 
Sbjct: 167 FEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAF 226

Query: 275 --GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
             G+++HG++I++       +G GLV+MYAK   +DD+  VF +M  +D + WN +ISG 
Sbjct: 227 DLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGC 286

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
              G ++EA   F  +R++GL  +  +L + L S ASL      +Q+H    K+G   D 
Sbjct: 287 SHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDA 346

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V N L+  Y     LS  ++VF      D ++  S+I A +  +     A+K +++M R
Sbjct: 347 HVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDH-GEGAIKLFMEMLR 405

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G  P+     ++L A +S S  + G QVHA +IK    ++    NAL+  Y KCG ++D
Sbjct: 406 KGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIED 465

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
            E  F+ + E R  VSW++MI G   +    +A+ L   M+  G   +H T  +VL AC 
Sbjct: 466 AELAFSSLPE-RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACN 524

Query: 573 SVATLERGMEVHACGVRACLEFDVVIG--SALVDMYSKCGRIDYASRFFDLMPVR-NVYS 629
               ++     +   ++     D      S ++D+  + G++D A    + MP + N   
Sbjct: 525 HAGLVDEAKR-YFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASV 583

Query: 630 WNSMISGYARHGHGDKALTLFSQMKL 655
           W +++   A   H D  L   +  KL
Sbjct: 584 WGALLG--ASRVHKDPELGKLAAEKL 607



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 158/579 (27%), Positives = 259/579 (44%), Gaps = 60/579 (10%)

Query: 3   DAKL---FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEM-PDRNSVSWACIV 58
           DA+L    H   +  GF  DVF+ N L+ +Y   G +  A ++FDE   +RN+VSW  ++
Sbjct: 22  DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLM 81

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
           S Y       +A ++F EMV +G     +    V+ AC   G      G QVH +V++  
Sbjct: 82  SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACT--GSRNIDAGRQVHAMVVRMG 139

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              D   +N L+ MY   +   D A  IFE++   D++SWN++IS     G      +L 
Sbjct: 140 YEKDVFTANALVDMYVK-MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELL 198

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL-QQILAMVKKAGLLSDLYVGSAL 237
            +M+  G    L PN +   S++ A      +G++ L +QI   + KA   SD Y+G  L
Sbjct: 199 LQMKSSG----LVPNVFMLSSILKACAG---AGAFDLGRQIHGFMIKANADSDDYIGVGL 251

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRKG----- 275
           V  +A+      A K+F+ M  ++++  N L+ G                 R++G     
Sbjct: 252 VDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNR 311

Query: 276 -------------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                              ++VH    + G      V NGL++ Y KC  + D+  VF  
Sbjct: 312 TTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEE 371

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
               D ++  +MI+ L Q    E AI  F  M R GL    F L S L++CASL     G
Sbjct: 372 CSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG 431

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +Q+H   +K    SD    NAL+  YA  G +      F  +PE   VSW+++IG  A  
Sbjct: 432 KQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLA-Q 490

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
                 A++ +  M   G +PN +T  ++L A +   +     + +   +K     + T 
Sbjct: 491 HGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR-YFNSMKEMFGIDRTE 549

Query: 497 EN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           E+   ++   G+ G++DD  ++   M  + +   W +++
Sbjct: 550 EHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALL 588



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 224/468 (47%), Gaps = 52/468 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +++ G+  DVF  N L+++YV++G +  AS +F++MPD + VSW  ++SG    G  
Sbjct: 132 HAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHD 191

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           + A ++  +M  +G + N + L S+L+AC   G   F  G Q+H  ++K+N   D  +  
Sbjct: 192 HRAIELLLQMKSSGLVPNVFMLSSILKAC--AGAGAFDLGRQIHGFMIKANADSDDYIGV 249

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY       D A ++F+ +  RDLI WN++IS  S  G     F +F  +++EG  
Sbjct: 250 GLVDMYAKN-HFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEG-- 306

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             L  N  T  +++ +  S  L  +   +Q+ A+ +K G + D +V + L+  + +    
Sbjct: 307 --LGVNRTTLAAVLKSTAS--LEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCL 362

Query: 248 YYARKIFEQMIQKNVVSMNGL-----------------MEGRRK---------------- 274
             A ++FE+    +++++  +                 ME  RK                
Sbjct: 363 SDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNAC 422

Query: 275 --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                   GK+VH +LI+         GN LV  YAKCG+I+D+   F  +  +  VSW+
Sbjct: 423 ASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWS 482

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            MI GL Q+G  + A+  F  M  +G+  ++ ++ S L +C   G +   ++      ++
Sbjct: 483 AMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEM 542

Query: 387 -GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
            G+D      + ++ L   AG L   +++   MP     S W +++GA
Sbjct: 543 FGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGA 590



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 160/329 (48%), Gaps = 20/329 (6%)

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            +LG QVHA  +     ++  + NAL++ YG  G MDD  ++F      R+ VSWN ++S
Sbjct: 23  AQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMS 82

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
            Y+ N+    A+ +   M+  G +   F F+ V++AC     ++ G +VHA  VR   E 
Sbjct: 83  AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEK 142

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           DV   +ALVDMY K GR+D AS  F+ MP  +V SWN++ISG   +GH  +A+ L  QMK
Sbjct: 143 DVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 202

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS------CMVDLL 708
             G +P+      +L AC+ AG  D G        Q++G + +    S       +VD+ 
Sbjct: 203 SSGLVPNVFMLSSILKACAGAGAFDLG-------RQIHGFMIKANADSDDYIGVGLVDMY 255

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN-AV 767
            +   LD   +  + M    + ++W  ++  C     R  E    A ++ + +  +   V
Sbjct: 256 AKNHFLDDAMKVFDWMS-HRDLILWNALISGCSHGG-RHDE----AFSIFYGLRKEGLGV 309

Query: 768 NYVLLANMYASGGKWEDVAKARKAMKEAE 796
           N   LA +  S    E  +  R+    AE
Sbjct: 310 NRTTLAAVLKSTASLEAASATRQVHALAE 338



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 45/99 (45%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K  F  D F  N L+  Y + G +  A   F  +P+R  VSW+ ++ G 
Sbjct: 429 EQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGL 488

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G    A ++F  MV  G   N   + SVL AC   G
Sbjct: 489 AQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 527


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 273/626 (43%), Positives = 396/626 (63%), Gaps = 7/626 (1%)

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           VF  M  ++ V+W  MI+   Q GC  +AI  F  M   G +   F+  S LS+C  LG 
Sbjct: 7   VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 66

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA---GYLSRCLKVFFLMPEHDQVSWNSV 429
           + LG+Q+H   ++LGL  DV V  +L+ +YA     G +    KVF  MPEH+ +SW ++
Sbjct: 67  LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 126

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           I A+A S     EA++ +  M      PN  +F ++L A  + S    G QV++  +K  
Sbjct: 127 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 186

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV 549
           +A+   + N+L+S Y + G M+D  K F  + E+ + VS+N+++ GY  N    +A  L 
Sbjct: 187 IASVNCVGNSLISMYARSGRMEDARKAFDILFEK-NLVSYNAIVDGYAKNLKSEEAFLLF 245

Query: 550 WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
             +   G  +  FTFA++LS  AS+  + +G ++H   ++   + +  I +AL+ MYS+C
Sbjct: 246 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 305

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
           G I+ A + F+ M  RNV SW SMI+G+A+HG   +AL +F +M   G  P+ +T+V VL
Sbjct: 306 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 365

Query: 670 SACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPN 729
           SACSH G++ EG KHF SM + +G++P++E ++CMVDLLGR+G L +  EFIN MP+  +
Sbjct: 366 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMAD 425

Query: 730 SLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKAR 789
           +L+WRT+LGA CR +   TELGR AA M+ E EP +   Y+LL+N++AS G+W+DV K R
Sbjct: 426 ALVWRTLLGA-CRVH-GNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 483

Query: 790 KAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTK 849
           K+MKE  + KEAGCSW+ +++ VH F  G+ SHP+   IY++L +L  K+++ GY+P T 
Sbjct: 484 KSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTD 543

Query: 850 FALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIV 908
           F L D+E E KE  +  HSEKIAVAF L   S+  PIRI KNLRVCGDCH+A K+IS   
Sbjct: 544 FVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMAT 603

Query: 909 GREIVLRDSNRFHHFNDGKCSCGDYW 934
           GREIV+RDSNRFHH  +G CSC DYW
Sbjct: 604 GREIVVRDSNRFHHIKNGVCSCNDYW 629



 Score =  187 bits (475), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 218/442 (49%), Gaps = 54/442 (12%)

Query: 37  ASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRAC 96
           A A K+FD+MP+RN V+W  +++ +   G + +A  +F +M  +G++ +R+   SVL AC
Sbjct: 2   APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 61

Query: 97  QECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE--STDCARRIFEEIETRD 154
            E G      G Q+H  V++     D  V   L+ MY  C    S D +R++FE++   +
Sbjct: 62  TELGL--LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHN 119

Query: 155 LISWNSIISVYSQRGD-TISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY 213
           ++SW +II+ Y+Q G+      +LF +M        ++PN ++F S++ A  +  LS  Y
Sbjct: 120 VMSWTAIITAYAQSGECDKEAIELFCKM----ISGHIRPNHFSFSSVLKACGN--LSDPY 173

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR 273
             +Q+ +   K G+ S   VG++L+S +AR G    ARK F+ + +KN+VS N +++G  
Sbjct: 174 TGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 233

Query: 274 -----------------------------------------KGKEVHGYLIRSGLFDMVA 292
                                                    KG+++HG L++ G      
Sbjct: 234 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 293

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           + N L++MY++CG I+ +  VF  M  ++ +SW +MI+G  ++G    A+  F  M   G
Sbjct: 294 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 353

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSLYADAGYLSRC 411
              +  + ++ LS+C+ +G I  GQ+      K  G+   +     ++ L   +G L   
Sbjct: 354 TKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 413

Query: 412 LKVFFLMP-EHDQVSWNSVIGA 432
           ++    MP   D + W +++GA
Sbjct: 414 MEFINSMPLMADALVWRTLLGA 435



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 210/437 (48%), Gaps = 53/437 (12%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A ++F+++  R+L++W  +I+ ++Q G       LF  M+  G+     P+ +T+ S+++
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGY----VPDRFTYSSVLS 59

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL---GNFYYARKIFEQMIQ 259
           A   + L    L +Q+ + V + GL  D+ VG +LV  +A+    G+   +RK+FEQM +
Sbjct: 60  AC--TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE 117

Query: 260 KNVVSMNGLMEGRRK------------------------------------------GKE 277
            NV+S   ++    +                                          G++
Sbjct: 118 HNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQ 177

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           V+ Y ++ G+  +  VGN L++MYA+ G ++D+R  F  +  K+ VS+N ++ G  +N  
Sbjct: 178 VYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLK 237

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
            EEA + F  +   G+  S F+  S LS  AS+G +  G+QIHG  LK G  S+  + NA
Sbjct: 238 SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNA 297

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+S+Y+  G +    +VF  M + + +SW S+I  FA      + A++ +  M   G  P
Sbjct: 298 LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA-KHGFATRALEMFHKMLETGTKP 356

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKI 516
           N +T++ +L+A S   M   G +    + K + +         ++   G+ G + +  + 
Sbjct: 357 NEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEF 416

Query: 517 FARMSERRDEVSWNSMI 533
              M    D + W +++
Sbjct: 417 INSMPLMADALVWRTLL 433



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 206/440 (46%), Gaps = 38/440 (8%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRV---GDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  H ++++ G A DV +  +L+++Y +    G +  + K+F++MP+ N +SW  I++ Y
Sbjct: 71  KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 130

Query: 62  THKGMSN-EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
              G  + EA ++F +M+      N ++  SVL+AC     S    G QV+   +K    
Sbjct: 131 AQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNL--SDPYTGEQVYSYAVKLGIA 188

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
               V N LI+MY       D AR+ F+ +  ++L+S+N+I+  Y++   +   F LF+ 
Sbjct: 189 SVNCVGNSLISMYARSGRMED-ARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNE 247

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           +   G   S     +TF SL++ A S    G    +QI   + K G  S+  + +AL+S 
Sbjct: 248 IADTGIGIS----AFTFASLLSGAASIGAMGKG--EQIHGRLLKGGYKSNQCICNALISM 301

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS--GLFDMVAVGN--- 295
           ++R GN   A ++F +M  +NV+S   ++ G  K    HG+  R+      M+  G    
Sbjct: 302 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAK----HGFATRALEMFHKMLETGTKPN 357

Query: 296 -----GLVNMYAKCGTIDDSRSVFRFMIGKDSV-----SWNTMISGLDQNGCYEEAIMNF 345
                 +++  +  G I + +  F  M  +  +      +  M+  L ++G   EA+   
Sbjct: 358 EITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFI 417

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYAD 404
            +M    LM+      + L +C   G   LG+  H   + L  + D   +  LLS L+A 
Sbjct: 418 NSM---PLMADALVWRTLLGACRVHGNTELGR--HAAEMILEQEPDDPAAYILLSNLHAS 472

Query: 405 AGYLSRCLKVFFLMPEHDQV 424
           AG     +K+   M E + +
Sbjct: 473 AGQWKDVVKIRKSMKERNLI 492



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 5/128 (3%)

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
           A + FD MP RN+ +W  MI+ +A+ G    A+ LF  M+L G +PD  T+  VLSAC+ 
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 675 AGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRA---GELDKIEEFINKMPITPNSL 731
            GL+  G K   S     GL   +     +VD+  +    G +D   +   +MP   N +
Sbjct: 64  LGLLALG-KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVM 121

Query: 732 IWRTVLGA 739
            W  ++ A
Sbjct: 122 SWTAIITA 129


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 287/769 (37%), Positives = 447/769 (58%), Gaps = 47/769 (6%)

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
           +L   Y+L++I+  V K G+  D ++ S+LV+ + +  +   AR++ E+M  ++V   N 
Sbjct: 1   MLRAKYILKKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQ 60

Query: 268 -------------------LMEGRR----------------------KGKEVHGYLIRSG 286
                              LM   R                       G+ +H  + + G
Sbjct: 61  KLSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYG 120

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
               + + N  V MY K  ++++    F+ M+ ++  S N ++SG       ++      
Sbjct: 121 FESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILI 180

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
            +  +G   + ++ IS L +CAS G +  G+ IHG+ +K G++ D  + N+L+++YA  G
Sbjct: 181 QLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCG 240

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
             +   KVF  +PE D VSW ++I  F  +E   S  ++ +  M   G++PN  TFI+IL
Sbjct: 241 SANYACKVFGEIPERDVVSWTALITGFV-AEGYGS-GLRIFNQMLAEGFNPNMYTFISIL 298

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
            + SS S   LG QVHAQ++K ++     +  AL+  Y K   ++D E IF R+  +RD 
Sbjct: 299 RSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLI-KRDL 357

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
            +W  +++GY  +    KA+     M + G + + FT A+ LS C+ +ATL+ G ++H+ 
Sbjct: 358 FAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSM 417

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            ++A    D+ + SALVDMY+KCG ++ A   FD +  R+  SWN++I GY++HG G KA
Sbjct: 418 AIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKA 477

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           L  F  M  +G +PD VTF+GVLSACSH GL++EG KHF S+S++YG+ P +E ++CMVD
Sbjct: 478 LKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVD 537

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           +LGRAG+  ++E FI +M +T N LIW TVLGAC        E G +AA  LFE+EP+  
Sbjct: 538 ILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHG--NIEFGERAAMKLFELEPEID 595

Query: 767 VNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKD 826
            NY+LL+NM+A+ G W+DV   R  M    VKKE GCSWV +   VHVF++ D SHP+  
Sbjct: 596 SNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIR 655

Query: 827 LIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPI 885
            I+ KL++L+QK+   GY P T   L ++    K++L+ YHSE++A+AF +L+ +++  I
Sbjct: 656 EIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTI 715

Query: 886 RIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           RI KNLR+CGDCH   K IS+I  +E+V+RD N FHHF +G CSC ++W
Sbjct: 716 RIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 764



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 144/569 (25%), Positives = 272/569 (47%), Gaps = 57/569 (10%)

Query: 9   LQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSN 68
            +++K+G   D  L ++L+NVYV+   L  A ++ +EMP ++   W   +S         
Sbjct: 13  FRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQ 72

Query: 69  EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV 128
           EA ++F  M      LN++   S++ A    G +   +G  +H  V K     D L+SN 
Sbjct: 73  EAVQLFYLMRHTRIRLNQFIFASLISAAASLGDN--HYGESIHACVCKYGFESDILISNA 130

Query: 129 LIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRY 188
            + MY    +S +   + F+ +   +L S N+++S +          ++  ++  EGF  
Sbjct: 131 FVTMYMKT-QSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGF-- 187

Query: 189 SLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
             +PN YTF S++   A+   +  G  +  Q++    K+G+  D ++ ++LV+ +A+ G+
Sbjct: 188 --EPNMYTFISILKTCASKGDLNEGKAIHGQVI----KSGINPDSHLWNSLVNVYAKCGS 241

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------------- 274
             YA K+F ++ +++VVS   L+ G                                   
Sbjct: 242 ANYACKVFGEIPERDVVSWTALITGFVAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSC 301

Query: 275 --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                   GK+VH  ++++ L     VG  LV+MYAK   ++D+ ++F  +I +D  +W 
Sbjct: 302 SSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWT 361

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            +++G  Q+G  E+A+  F  M+R+G+  + F+L S+LS C+ +  +  G+Q+H   +K 
Sbjct: 362 VIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKA 421

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
           G   D+ V++AL+ +YA  G +     VF  +   D VSWN++I  ++       +A+K 
Sbjct: 422 GQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYS-QHGQGGKALKA 480

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCY 504
           +  M   G  P+ VTFI +L+A S   + + G + H   +        TIE+   ++   
Sbjct: 481 FEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKK-HFNSLSKIYGITPTIEHYACMVDIL 539

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           G+ G+  + E     M    + + W +++
Sbjct: 540 GRAGKFHEVESFIEEMKLTSNVLIWETVL 568



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 200/412 (48%), Gaps = 51/412 (12%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  + K+GF  D+ + N  + +Y++   + +  + F  M   N  S   ++SG+      
Sbjct: 113 HACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETC 172

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           ++  ++  +++  GF  N Y   S+L+ C   G      G  +H  V+KS    D  + N
Sbjct: 173 DQGPRILIQLLVEGFEPNMYTFISILKTCASKGD--LNEGKAIHGQVIKSGINPDSHLWN 230

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ +Y  C  S + A ++F EI  RD++SW ++I+ +   G   S  ++F++M  EGF 
Sbjct: 231 SLVNVYAKC-GSANYACKVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGF- 287

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
               PN YTF S++ +  S  LS   L +Q+ A + K  L  + +VG+ALV  +A+    
Sbjct: 288 ---NPNMYTFISILRSCSS--LSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFL 342

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------------- 274
             A  IF ++I++++ +   ++ G  +                                 
Sbjct: 343 EDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGC 402

Query: 275 --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                   G+++H   I++G    + V + LV+MYAKCG ++D+  VF  ++ +D+VSWN
Sbjct: 403 SRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWN 462

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
           T+I G  Q+G   +A+  F AM  +G +    + I  LS+C+ +G I  G++
Sbjct: 463 TIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKK 514



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 147/271 (54%), Gaps = 14/271 (5%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H Q++K G   D  L N+L+NVY + G    A K+F E+P+R+ VSW  +++G+ 
Sbjct: 209 EGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFV 268

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            +G  +   ++F +M+  GF  N Y   S+LR+C     S    G QVH  ++K++   +
Sbjct: 269 AEGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSL--SDVDLGKQVHAQIVKNSLDGN 325

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V   L+ MY       D A  IF  +  RDL +W  I++ Y+Q G      K F +MQ
Sbjct: 326 DFVGTALVDMYAKNRFLED-AETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQ 384

Query: 183 REGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           REG    +KPNE+T  S ++  +  +++ SG    +Q+ +M  KAG   D++V SALV  
Sbjct: 385 REG----VKPNEFTLASSLSGCSRIATLDSG----RQLHSMAIKAGQSGDMFVASALVDM 436

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           +A+ G    A  +F+ ++ ++ VS N ++ G
Sbjct: 437 YAKCGCVEDAEVVFDGLVSRDTVSWNTIICG 467


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 294/768 (38%), Positives = 445/768 (57%), Gaps = 50/768 (6%)

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
           ++G +L   IL    K G   DL+  + L++ + +  +   A K+F++M Q N +S   L
Sbjct: 52  IAGKHLHCHIL----KRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTL 107

Query: 269 MEGR-----------------RKGKEVHGYLIRSGLFDMVA------------------- 292
            +G                  ++G EV+ ++  + L  +V+                   
Sbjct: 108 AQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGH 167

Query: 293 -----VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
                VG  L++ Y+  G +D +R VF  +  KD VSW  M++   +N  YEE++  F  
Sbjct: 168 HADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQ 227

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           MR  G   +NF++   L SC  L    +G+ +HG  LK   D D+ V  ALL LYA +G 
Sbjct: 228 MRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGE 287

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +    ++F  MP+ D + W+ +I  +A S+    EA+  +L MR+    PN  TF ++L 
Sbjct: 288 IIDAQRLFEEMPKTDLIPWSLMIARYAQSDR-SKEALDLFLRMRQTSVVPNNFTFASVLQ 346

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
           A +S     LG Q+H+ V+K+ + +   + NA++  Y KCGE+++  K+F  + +R D V
Sbjct: 347 ACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRND-V 405

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           +WN++I GY+      +AMNL   M++   +    T+++VL A AS+A LE G+++H+  
Sbjct: 406 TWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLT 465

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
           ++     D V+ ++L+DMY+KCGRI+ A   FD M  R+  SWN+MI GY+ HG   +AL
Sbjct: 466 IKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEAL 525

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDL 707
            LF  M+     P+ +TFVGVLSACS+AGL+ +G  HF+SMS+ Y + P +E ++CMV L
Sbjct: 526 NLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWL 585

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAV 767
           LGR G  D+  + I ++   P+ ++WR +LGAC     +K +LGR  A  + EMEP +  
Sbjct: 586 LGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIH--KKVDLGRVCAQHVLEMEPHDDA 643

Query: 768 NYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDL 827
            +VLL+NMYA+ G+W++VA  RK M++ +V+KE G SWV  +  VH F  GD SHP+  L
Sbjct: 644 THVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKL 703

Query: 828 IYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNS-KLPIR 886
           I   L+ LN+K RDAGYVP     L D++ + KE  +  HSE++A+A+ L R      IR
Sbjct: 704 ICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIR 763

Query: 887 IMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           I+KNLR+C DCH+  K ISK+V REIV+RD NRFHHF  G CSCGDYW
Sbjct: 764 IIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811



 Score =  229 bits (584), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 174/629 (27%), Positives = 294/629 (46%), Gaps = 87/629 (13%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G  +HC +LK   + D    N+L+  Y       D A ++F+E+   + IS+ ++   YS
Sbjct: 54  GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQD-ASKLFDEMPQTNTISFVTLAQGYS 112

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
           +            R+ +EG     + N + F +L+    S  L+  +L   + A V K G
Sbjct: 113 RDHQFHQALHFILRIFKEGH----EVNPFVFTTLLKLLVSMDLA--HLCWTLHACVYKLG 166

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL------------------ 268
             +D +VG+AL+  ++  GN   AR +F+ +  K++VS  G+                  
Sbjct: 167 HHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFN 226

Query: 269 -----------------------MEGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKC 304
                                  +E    GK VHG  ++ G +D  + VG  L+ +YAK 
Sbjct: 227 QMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALK-GCYDHDLFVGIALLELYAKS 285

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G I D++ +F  M   D + W+ MI+   Q+   +EA+  F  MR+  ++ +NF+  S L
Sbjct: 286 GEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVL 345

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +CAS   + LG+QIH   LK GL+S+V VSNA++ +YA  G +   +K+F  +P+ + V
Sbjct: 346 QACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDV 405

Query: 425 SWNSVIGAFA---DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           +WN++I  +    D E     A+  +  M      P  VT+ ++L A++S +  + G Q+
Sbjct: 406 TWNTIIVGYVQLGDGE----RAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQI 461

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H+  IK     +T + N+L+  Y KCG ++D    F +M+ +RDEVSWN+MI GY  + +
Sbjct: 462 HSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAMICGYSMHGM 520

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH------ACGVRACLEFD 595
             +A+NL   M     + +  TF  VLSAC++   L +G + H         ++ C+E  
Sbjct: 521 SMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKG-QAHFESMSKDYDIKPCIEH- 578

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARH-------------- 640
               + +V +  + GR D A +    +  + +V  W +++     H              
Sbjct: 579 ---YTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVL 635

Query: 641 ---GHGDKALTLFSQMKLDGPLPDHVTFV 666
               H D    L S M       D+V FV
Sbjct: 636 EMEPHDDATHVLLSNMYATAGRWDNVAFV 664



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 147/581 (25%), Positives = 274/581 (47%), Gaps = 55/581 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  ILK G + D+F  N L+N YV+   L  ASKLFDEMP  N++S+  +  GY+  
Sbjct: 55  KHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRD 114

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
              ++A      + + G  +N +   ++L+       +   + +  H  V K     D  
Sbjct: 115 HQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTL--HACVYKLGHHADAF 172

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V   LI  Y S   + D AR +F++I  +D++SW  +++ Y++        +LF++M+  
Sbjct: 173 VGTALIDAY-SVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIM 231

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G+    KPN +T    + +     L    + + +     K     DL+VG AL+  +A+ 
Sbjct: 232 GY----KPNNFTISGALKSCLG--LEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKS 285

Query: 245 GNFYYARKIFEQMIQKNVV-----------------SMNGLMEGRRK------------- 274
           G    A+++FE+M + +++                 +++  +  R+              
Sbjct: 286 GEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVL 345

Query: 275 -----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      GK++H  +++ GL   V V N ++++YAKCG I++S  +F  +  ++ V
Sbjct: 346 QACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDV 405

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           +WNT+I G  Q G  E A+  F  M    +  +  +  S L + ASL  +  G QIH   
Sbjct: 406 TWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLT 465

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           +K   + D  V+N+L+ +YA  G ++     F  M + D+VSWN++I  ++    +  EA
Sbjct: 466 IKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYS-MHGMSMEA 524

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALL 501
           +  +  M+     PN +TF+ +L+A S+  +   G Q H + +  +   +  IE+   ++
Sbjct: 525 LNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKG-QAHFESMSKDYDIKPCIEHYTCMV 583

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
              G+ G  D+  K+   ++ +   + W +++    IH ++
Sbjct: 584 WLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKV 624



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 155/324 (47%), Gaps = 18/324 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  +LK G   +VF+ N +++VY + G++ ++ KLF+E+PDRN V+W  I+ GY   
Sbjct: 358 KQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQL 417

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G    A  +F  M+            SVLRA      +  + G+Q+H L +K+    D +
Sbjct: 418 GDGERAMNLFTHMLEHDMQPTEVTYSSVLRA--SASLAALEPGLQIHSLTIKTMYNKDTV 475

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V+N LI MY  C    D AR  F+++  RD +SWN++I  YS  G ++    LF  MQ  
Sbjct: 476 VANSLIDMYAKCGRIND-ARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHT 534

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
                 KPN+ TF  +++A  ++ L   G    +   +M K   +   +   + +V    
Sbjct: 535 ----DCKPNKLTFVGVLSACSNAGLLYKGQAHFE---SMSKDYDIKPCIEHYTCMVWLLG 587

Query: 243 RLGNFYYARKIF-EQMIQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG---- 296
           RLG F  A K+  E   Q +V+    L+      K+V  G +    + +M    +     
Sbjct: 588 RLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVL 647

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGK 320
           L NMYA  G  D+   V ++M  K
Sbjct: 648 LSNMYATAGRWDNVAFVRKYMQKK 671


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 311/840 (37%), Positives = 472/840 (56%), Gaps = 65/840 (7%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A  +F++   RD  S+ S++  +S+ G T    +LF  +Q  G           F S++ 
Sbjct: 50  AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCS----IFSSVLK 105

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
              S+ L      +Q+     K G L D+ VG++LV  + +  NF   R +F++M ++NV
Sbjct: 106 V--SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNV 163

Query: 263 VSMNGLMEGRRK-----------------------------------------GKEVHGY 281
           V+   L+ G  +                                         G +VH  
Sbjct: 164 VTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 223

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           ++++GL   + V N L+N+Y KCG +  +R +F     K  V+WN+MISG   NG   EA
Sbjct: 224 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 283

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +  F +MR + +  S  S  S +  CA+L  +   +Q+H   +K G   D ++  AL+  
Sbjct: 284 LGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVA 343

Query: 402 YADAGYLSRCLKVF----FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           Y+    +   L++F    FL    + VSW ++I  F  ++    EAV  + +M+R G  P
Sbjct: 344 YSKCMAMLDALRLFKETGFL---GNVVSWTAMISGFLQNDG-KEEAVGLFSEMKRKGVRP 399

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           N  T+  IL A    S      +VHAQV+K N    +T+  ALL  Y K G++D+  K+F
Sbjct: 400 NEFTYSVILTALPVISPS----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVF 455

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA-SVAT 576
           + + + +D V+W++M++GY        A+ +   + + G + + FTF+++L+ CA + A+
Sbjct: 456 SGI-DNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTAS 514

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           + +G + H   +++ L+  + + SAL+ MY+K G I+ A   F     +++ SWNSMISG
Sbjct: 515 MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISG 574

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           YA+HG   KAL +F +MK      D VTF+GV +AC+HAGLV+EG K+F  M +   + P
Sbjct: 575 YAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 634

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAAN 756
             E  SCMVDL  RAG+L+K  + I+ MP    S IWRT+L A CR + +KTELGR AA 
Sbjct: 635 TKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAA-CRVH-KKTELGRLAAE 692

Query: 757 MLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV 816
            +  M P+++  YVLL+NMYA  G W++ AK RK M E  VKKE G SW+ +K+  + F+
Sbjct: 693 KIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFL 752

Query: 817 AGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFV 876
           AGD SHP KD IY KL++L+ +++D GY P T + L D++ E KE +++ HSE++A+AF 
Sbjct: 753 AGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFG 812

Query: 877 LTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF-NDGKCSCGDYW 934
           L    K  P+ I+KNLRVCGDCH   K I+KI  REIV+RDSNRFHHF +DG CSCGD+W
Sbjct: 813 LIATPKGSPLLIIKNLRVCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 177/636 (27%), Positives = 303/636 (47%), Gaps = 73/636 (11%)

Query: 39  ASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRA--- 95
           A  LFD+ PDR+  S+  ++ G++  G + EA ++F  +   G  ++     SVL+    
Sbjct: 50  AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109

Query: 96  -CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRD 154
            C E       FG Q+HC  +K     D  V   L+  Y       D  R +F+E++ R+
Sbjct: 110 LCDEL------FGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD-GRNVFDEMKERN 162

Query: 155 LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL 214
           +++W ++IS Y++      V  LF RMQ EG     +PN +TF + +       + G  L
Sbjct: 163 VVTWTTLISGYARNSLNEEVLTLFMRMQDEG----TQPNSFTFAAALGVLAEEGVGGRGL 218

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR-- 272
             Q+  +V K GL   + V ++L++ + + GN   AR +F++   K+VV+ N ++ G   
Sbjct: 219 --QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 276

Query: 273 ---------------------------------------RKGKEVHGYLIRSGLFDMVAV 293
                                                  R  +++H  +++ G      +
Sbjct: 277 NGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNI 336

Query: 294 GNGLVNMYAKCGTIDDSRSVFR---FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
              L+  Y+KC  + D+  +F+   F+   + VSW  MISG  QN   EEA+  F  M+R
Sbjct: 337 RTALMVAYSKCMAMLDALRLFKETGFL--GNVVSWTAMISGFLQNDGKEEAVGLFSEMKR 394

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
            G+  + F+    L++      ++   ++H + +K   +   +V  ALL  Y   G +  
Sbjct: 395 KGVRPNEFTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDE 450

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL--AA 468
             KVF  +   D V+W++++  +A +      A+K + ++ + G  PN  TF +IL   A
Sbjct: 451 AAKVFSGIDNKDIVAWSAMLAGYAQA-GETEAAIKIFSELTKGGVKPNEFTFSSILNVCA 509

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
           A++ SMG+ G Q H   IK  + +   + +ALL+ Y K G ++  E++F R  E +D VS
Sbjct: 510 ATTASMGQ-GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQRE-KDLVS 567

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           WNSMISGY  +    KA+++   M +R  ++D  TF  V +AC     +E G +     V
Sbjct: 568 WNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMV 627

Query: 589 RAC-LEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           R C +       S +VD+YS+ G+++ A +  D MP
Sbjct: 628 RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMP 663



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 180/699 (25%), Positives = 307/699 (43%), Gaps = 93/699 (13%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H Q +K GF  DV +  +L++ Y++  +      +FDEM +RN V+W  ++SGY   
Sbjct: 117 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARN 176

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            ++ E   +F  M   G   N +   + L    E G  G   G+QVH +V+K+       
Sbjct: 177 SLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGG--RGLQVHTVVVKNGLDKTIP 234

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           VSN LI +Y  C  +   AR +F++ E + +++WNS+IS Y+  G  +    +F  M+  
Sbjct: 235 VSNSLINLYLKC-GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLN 293

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
             R S    E +F S+I    +  L      +Q+   V K G + D  + +AL+  +++ 
Sbjct: 294 HVRLS----ESSFASIIKLCAN--LKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKC 347

Query: 245 GNFYYARKIFEQM-IQKNVVSMNGLMEG-----------------RRKG----------- 275
                A ++F++     NVVS   ++ G                 +RKG           
Sbjct: 348 MAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVI 407

Query: 276 ---------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                     EVH  ++++       VG  L++ Y K G +D++  VF  +  KD V+W+
Sbjct: 408 LTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWS 467

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM-LGQQIHGEGLK 385
            M++G  Q G  E AI  F  + + G+  + F+  S L+ CA+    M  G+Q HG  +K
Sbjct: 468 AMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIK 527

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
             LDS + VS+ALL++YA  G++    +VF    E D VSWNS+I  +A       +A+ 
Sbjct: 528 SRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYA-QHGQAMKALD 586

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCY 504
            + +M++     + VTFI + AA +   + + G +    +++   +A      + ++  Y
Sbjct: 587 VFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLY 646

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            + G+++   K+   M        W                                   
Sbjct: 647 SRAGQLEKAMKVIDNMPNLAGSTIWR---------------------------------- 672

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
            T+L+AC      E G  + A  + A +  D      L +MY++ G     ++   LM  
Sbjct: 673 -TILAACRVHKKTELG-RLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNE 730

Query: 625 RNV-----YSWNSMISGYARHGHGDKALTLFSQ--MKLD 656
           RNV     YSW  + +       GD++  L  Q  MKL+
Sbjct: 731 RNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLE 769


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 314/897 (35%), Positives = 492/897 (54%), Gaps = 67/897 (7%)

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV-LIAMYGSCLESTDCARRIF 147
           +G +L+AC +      + G ++H +V  S Q  +  V N  +I MY  C   +D +R +F
Sbjct: 1   MGVLLQACGQ--RKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSD-SRMVF 57

Query: 148 EEIETRDLISWNSIISVYSQRG---DTISVF-KLFSRMQREGFRYSLKPNEYTFGSLITA 203
           +++  ++L  WN+I+S Y++     D +S+F +L S  +        KP+ +T   +I A
Sbjct: 58  DKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEH-------KPDNFTLPCVIKA 110

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
               +  G  L Q I  M  K  L+SD++VG+AL++ + + G    A K+FE M ++N+V
Sbjct: 111 CAGLLDLG--LGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLV 168

Query: 264 SMNGLM-------------------------------------------EGRRKGKEVHG 280
           S N ++                                           E   KG  VHG
Sbjct: 169 SWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHG 228

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL--DQNGCY 338
             ++ GL + + V N L++MY+KC  + +++ +F     K+ VSWN+MI G   +++ C 
Sbjct: 229 LAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCR 288

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
              ++         + +  F++++ L  C     +   +++HG   + GL S+  V+NA 
Sbjct: 289 TFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAF 348

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           ++ Y   G L    +VF LM      SWN+++  +A +     +A+  YL M  +G  P+
Sbjct: 349 IAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSD-PRKALDLYLQMTDSGLDPD 407

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
             T  ++L A S       G ++H   ++  +A +  I  +LLS Y  CG+    + +F 
Sbjct: 408 WFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFD 467

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
            M E R  VSWN MI+GY  N L  +A+NL   M+  G +        V  AC+ ++ L 
Sbjct: 468 GM-EHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALR 526

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
            G E+H   ++A L  D+ + S+++DMY+K G I  + R FD +  ++V SWN +I+GY 
Sbjct: 527 LGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYG 586

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
            HG G +AL LF +M   G  PD  TF G+L ACSHAGLV++G ++F  M  ++ + P+L
Sbjct: 587 IHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKL 646

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
           E ++C+VD+LGRAG +D     I +MP  P+S IW ++L + CR +     LG K AN L
Sbjct: 647 EHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSS-CRIH-GNLGLGEKVANKL 704

Query: 759 FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
            E+EP+   NYVL++N++A  GKW+DV + R  MK+  ++K+AGCSW+ +   VH F+ G
Sbjct: 705 LELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIG 764

Query: 819 DESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLT 878
           DE  PE + + E  + L  K+   GY P T   L DLE E K  ++  HSEK+A++F L 
Sbjct: 765 DEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLL 824

Query: 879 RNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             +K LP+R+ KNLR+CGDCH+A KFISK+V R+IV+RD+ RFHHF DG CSCGDYW
Sbjct: 825 NTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 187/699 (26%), Positives = 317/699 (45%), Gaps = 72/699 (10%)

Query: 16  FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFK 75
           F  D  L   +I +Y   G  + +  +FD++  +N   W  IVS YT   +  +A  +F 
Sbjct: 30  FCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFS 89

Query: 76  EMVRAG-FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
           E++       + + L  V++AC   G      G  +H +  K +   D  V N LIAMYG
Sbjct: 90  ELISVTEHKPDNFTLPCVIKAC--AGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYG 147

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
            C    + A ++FE +  R+L+SWNSII  +S+ G     F  F  M       S  P+ 
Sbjct: 148 KC-GLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVG--EESFVPDV 204

Query: 195 YTFGSLITAAYSSVLSGSYLLQQILA---MVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
            T  +++      V +G   +++ +A   +  K GL  +L V ++L+  +++      A+
Sbjct: 205 ATLVTVL-----PVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQ 259

Query: 252 KIFEQMIQKNVVSMNGLMEGRRKG------------------------------------ 275
            +F++  +KN+VS N ++ G  +                                     
Sbjct: 260 LLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLE 319

Query: 276 -------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
                  KE+HGY  R GL     V N  +  Y +CG +  S  VF  M  K   SWN +
Sbjct: 320 RSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNAL 379

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           + G  QN    +A+  +  M   GL    F++ S L +C+ +  +  G++IHG  L+ GL
Sbjct: 380 LCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGL 439

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
             D  +  +LLSLY   G       +F  M     VSWN +I  ++ +  L  EA+  + 
Sbjct: 440 AVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQN-GLPDEAINLFR 498

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            M   G  P  +  + +  A S  S  +LG ++H   +K ++  +  + ++++  Y K G
Sbjct: 499 QMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGG 558

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
            +   ++IF R+ E +D  SWN +I+GY  +    +A+ L   M++ G + D FTF  +L
Sbjct: 559 CIGLSQRIFDRLRE-KDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGIL 617

Query: 569 SACASVATLERGME-----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
            AC+    +E G+E     ++   +   LE      + +VDM  + GRID A R  + MP
Sbjct: 618 MACSHAGLVEDGLEYFNQMLNLHNIEPKLEH----YTCVVDMLGRAGRIDDALRLIEEMP 673

Query: 624 -VRNVYSWNSMISGYARHGH---GDKALTLFSQMKLDGP 658
              +   W+S++S    HG+   G+K      +++ + P
Sbjct: 674 GDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKP 712



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 161/583 (27%), Positives = 278/583 (47%), Gaps = 53/583 (9%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            ++ H    K     DVF+ N LI +Y + G +  A K+F+ MP+RN VSW  I+ G++ 
Sbjct: 120 GQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSE 179

Query: 64  KGMSNEACKMFKEMV--RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
            G   E+   F+EM+     F+ +   L +VL  C   G    + GM VH L +K     
Sbjct: 180 NGFLQESFNAFREMLVGEESFVPDVATLVTVLPVC--AGEEDIEKGMAVHGLAVKLGLNE 237

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           + +V+N LI MY  C   ++ A+ +F++ + ++++SWNS+I  Y++  D    F L  +M
Sbjct: 238 ELMVNNSLIDMYSKCRFLSE-AQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKM 296

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           Q E  +  +K +E+T  +++        S    L+++     + GL S+  V +A ++ +
Sbjct: 297 QTEDAK--MKADEFTILNVLPVCLER--SELQSLKELHGYSWRHGLQSNELVANAFIAAY 352

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG------RRK--------------------- 274
            R G    + ++F+ M  K V S N L+ G       RK                     
Sbjct: 353 TRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIG 412

Query: 275 --------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                         G+E+HG+ +R+GL     +G  L+++Y  CG    ++ +F  M  +
Sbjct: 413 SLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHR 472

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
             VSWN MI+G  QNG  +EAI  F  M  DG+     +++    +C+ L  + LG+++H
Sbjct: 473 SLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELH 532

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
              LK  L  D+ VS++++ +YA  G +    ++F  + E D  SWN +I  +       
Sbjct: 533 CFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYG-IHGRG 591

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENA 499
            EA++ +  M R G  P+  TF  IL A S   + + G +   Q++  +N+  +      
Sbjct: 592 KEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTC 651

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
           ++   G+ G +DD  ++   M    D   W+S++S   IH  L
Sbjct: 652 VVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNL 694



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 183/393 (46%), Gaps = 23/393 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H    +HG   +  + N  I  Y R G L S+ ++FD M  +   SW  ++ GY   
Sbjct: 327 KELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQN 386

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
               +A  ++ +M  +G   + + +GS+L AC         +G ++H   L++    D  
Sbjct: 387 SDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRM--KSLHYGEEIHGFALRNGLAVDPF 444

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           +   L+++Y  C +    A+ +F+ +E R L+SWN +I+ YSQ G       LF +M  +
Sbjct: 445 IGISLLSLYICCGKPF-AAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSD 503

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G    ++P  Y    +      S LS   L +++     KA L  D++V S+++  +A+ 
Sbjct: 504 G----IQP--YEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKG 557

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGK---EVHGYLIRSGLFDMVAVGNGLV 298
           G    +++IF+++ +K+V S N ++ G     +GK   E+   ++R GL        G++
Sbjct: 558 GCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGIL 617

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
              +  G ++D    F  M+   ++      +  ++  L + G  ++A+     M  D  
Sbjct: 618 MACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGD-- 675

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
              +    S LSSC   G + LG+++  + L+L
Sbjct: 676 -PDSRIWSSLLSSCRIHGNLGLGEKVANKLLEL 707


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 326/877 (37%), Positives = 474/877 (54%), Gaps = 67/877 (7%)

Query: 106 FGMQVHCLVLKSNQTFDGLVS---NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSII 162
            G  +H  +LKS     GL+    N L++ Y  C      ARR+F+E      +SW+S++
Sbjct: 22  LGAHIHAHLLKS-----GLLHAFRNHLLSFYSKC-RLPGSARRVFDETPDPCHVSWSSLV 75

Query: 163 SVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMV 222
           + YS           F  M+  G R     NE+    ++  A  + L       Q+ A+ 
Sbjct: 76  TAYSNNALPREALAAFRAMRARGVRC----NEFALPIVLKCAPDAGLG-----VQVHAVA 126

Query: 223 KKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ-KNVVSMNGLMEGRRK------- 274
              GL  D++V +ALV+ +   G    AR++F++  + +N VS NG+M    K       
Sbjct: 127 VSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDA 186

Query: 275 ----------------------------------GKEVHGYLIRSGLFDMVAVGNGLVNM 300
                                             G++VH  ++R+G    V   N LV+M
Sbjct: 187 VELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDM 246

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           Y+K G I  +  VF  +   D VSWN  ISG   +G  + A+     M+  GL+ + F+L
Sbjct: 247 YSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTL 306

Query: 361 ISTLSSCASLGWIMLG--QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
            S L +CA  G       +QIHG  +K   DSD  +  AL+ +YA  G L    KVF  +
Sbjct: 307 SSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWI 366

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
           P  D + WN++I   +       E++  +  MR+ G   N  T   +L + +S       
Sbjct: 367 PRKDLLLWNALISGCSHG-GCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDT 425

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
            QVHA   K    +++ + N L+  Y KC  +    K+F   S   + +++ SMI+    
Sbjct: 426 TQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSD-NIIAFTSMITALSQ 484

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
            +    A+ L   M+++G   D F  +++L+ACAS++  E+G +VHA  ++     DV  
Sbjct: 485 CDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFA 544

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
           G+ALV  Y+KCG I+ A   F  +P + V SW++MI G A+HGHG +AL +F +M  +  
Sbjct: 545 GNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERI 604

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
            P+H+T   VL AC+HAGLVDE   +F SM +++G+    E +SCM+DLLGRAG+LD   
Sbjct: 605 APNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAM 664

Query: 719 EFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYAS 778
           E +N MP   N+ +W  +L A  R + R  ELG+ AA  LF +EP+ +  +VLLAN YAS
Sbjct: 665 ELVNSMPFEANAAVWGALLAA-SRVH-RDPELGKLAAEKLFVLEPEKSGTHVLLANTYAS 722

Query: 779 GGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQK 838
            G W++VAK RK MK+++VKKE   SWV +KD VH F+ GD+SHP    IY KL+EL   
Sbjct: 723 AGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDL 782

Query: 839 MRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL-TRNSKLPIRIMKNLRVCGDC 897
           M  AGYVP  +  L D++   KE L+S+HSE++AVAF L +  +  PIR+ KNLR+C DC
Sbjct: 783 MSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDC 842

Query: 898 HSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           H AFKFISKIV REI++RD NRFHHF+DG CSCGDYW
Sbjct: 843 HVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 205/733 (27%), Positives = 347/733 (47%), Gaps = 73/733 (9%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +LK G  +     N L++ Y +     SA ++FDE PD   VSW+ +V+ Y++  +
Sbjct: 26  IHAHLLKSGLLHA--FRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNAL 83

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA   F+ M   G   N +AL  VL+   + G      G+QVH + + +  + D  V+
Sbjct: 84  PREALAAFRAMRARGVRCNEFALPIVLKCAPDAG-----LGVQVHAVAVSTGLSGDIFVA 138

Query: 127 NVLIAMYGSCLESTDCARRIFEE-IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           N L+AMYG      D ARR+F+E    R+ +SWN ++S + +        +LF  M   G
Sbjct: 139 NALVAMYGG-FGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSG 197

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ---QILAMVKKAGLLSDLYVGSALVSGFA 242
            R    PNE+ F  ++ A      +GS  L+   ++ AMV + G   D++  +ALV  ++
Sbjct: 198 VR----PNEFGFSCVVNAC-----TGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYS 248

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRKG---------- 275
           +LG+ + A  +F ++ + +VVS N  + G                 +  G          
Sbjct: 249 KLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSS 308

Query: 276 ----------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                           +++HG++I++       +G  LV+MYAK G +DD+R VF ++  
Sbjct: 309 ILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPR 368

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           KD + WN +ISG    GC+ E++  FC MR++G   +  +L + L S ASL  I    Q+
Sbjct: 369 KDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQV 428

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           H    K+G  SD  V N L+  Y     L    KVF      + +++ S+I A +  +  
Sbjct: 429 HALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDH- 487

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
             +A+K +++M R G  P+     ++L A +S S  + G QVHA +IK     +    NA
Sbjct: 488 GEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNA 547

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  Y KCG ++D +  F+ + + +  VSW++MI G   +    +A+++   M+      
Sbjct: 548 LVYTYAKCGSIEDADLAFSGLPD-KGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAP 606

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG--SALVDMYSKCGRIDYASR 617
           +H T  +VL AC     ++   + +   ++     D      S ++D+  + G++D A  
Sbjct: 607 NHITLTSVLCACNHAGLVDEA-KGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAME 665

Query: 618 FFDLMPVR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV-TFVGVLSACSHA 675
             + MP   N   W ++++  A   H D  L   +  KL    P+   T V + +  + A
Sbjct: 666 LVNSMPFEANAAVWGALLA--ASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASA 723

Query: 676 GLVDEGFKHFKSM 688
           G+ DE  K  K M
Sbjct: 724 GMWDEVAKVRKLM 736



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 137/328 (41%), Gaps = 20/328 (6%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D    H    K GF  D  + N LI+ Y +   L  A+K+F+E    N +++  +++  +
Sbjct: 424 DTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALS 483

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                 +A K+F EM+R G   + + L S+L AC     S ++ G QVH  ++K     D
Sbjct: 484 QCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASL--SAYEQGKQVHAHLIKRKFMTD 541

Query: 123 GLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
               N L+  Y  C  +E  D A   F  +  + ++SW+++I   +Q G       +F R
Sbjct: 542 VFAGNALVYTYAKCGSIEDADLA---FSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRR 598

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M  E     + PN  T  S++ A   + L          +M +  G+       S ++  
Sbjct: 599 MVDE----RIAPNHITLTSVLCACNHAGLVDE-AKGYFSSMKEMFGIDRTEEHYSCMIDL 653

Query: 241 FARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG-- 296
             R G    A ++   M  + N      L+   R  ++   G L    LF +    +G  
Sbjct: 654 LGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTH 713

Query: 297 --LVNMYAKCGTIDDSRSVFRFMIGKDS 322
             L N YA  G  D+   V + M  KDS
Sbjct: 714 VLLANTYASAGMWDEVAKVRKLM--KDS 739



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 45/99 (45%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K  F  DVF  N L+  Y + G +  A   F  +PD+  VSW+ ++ G 
Sbjct: 524 EQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGL 583

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G    A  +F+ MV      N   L SVL AC   G
Sbjct: 584 AQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAG 622


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 282/666 (42%), Positives = 406/666 (60%), Gaps = 8/666 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVA-VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
           R G+  H  +I++    + + + N LVNMY+K    + ++ +      +  V+W  +I+G
Sbjct: 23  RLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAG 82

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
             QNG +  A+ +F  MRRD +  ++F+      +  SL   ++G+Q+H   +K G  SD
Sbjct: 83  SVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISD 142

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           V V  +   +Y+ AG      K+F  MPE +  +WN+ + + +  E    +A+  +++ R
Sbjct: 143 VFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYL-SNSVLEGRYDDALTAFIEFR 201

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             GW PN +TF   L A +  S  +LG Q+H  V++     + ++ N L+  YGKC ++ 
Sbjct: 202 HEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVG 261

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
             E IF+ +S+  D VSW SMI  Y+ N+   KA  +     + G     F  ++VLSAC
Sbjct: 262 CSEIIFSGISKPND-VSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSAC 320

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           A ++ LE G  VH   V+AC+  ++ +GSALVDMY KCG I+ A R FD MP RN+ +WN
Sbjct: 321 AGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWN 380

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGP--LPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           +MI GYA  G  D A+TLF +M        P++VTFV VLSACS AG V+ G + F+SM 
Sbjct: 381 AMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMR 440

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
             YG+ P  E ++C+VDLLGRAG +++  +FI KMPI P   +W  +LGA       K+E
Sbjct: 441 GRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFG--KSE 498

Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMK 809
           LG+ AA+ LFE++P ++ N+VLL+NM+A+ G+WE+    RK MK+  +KK AGCSW+T  
Sbjct: 499 LGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAG 558

Query: 810 DGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSE 869
           + VHVF A D SH     I   L +L  +M  AGY+P T FALFDLE E K   V YHSE
Sbjct: 559 NAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSE 618

Query: 870 KIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKC 928
           KIA+AF +++  + +PIRI KNLR+CGDCHSA KFIS IVGREI++RD+N FH F D +C
Sbjct: 619 KIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQC 678

Query: 929 SCGDYW 934
           SC DYW
Sbjct: 679 SCRDYW 684



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 228/475 (48%), Gaps = 25/475 (5%)

Query: 235 SALVSGFARLGNFYYARKIFEQM----IQKN------VVSMNGLMEGRRKGKEVHGYLIR 284
           +AL++G  + G F  A   F  M    IQ N          +G +     GK+VH   ++
Sbjct: 77  TALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVK 136

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
           +G    V VG    +MY+K G  +++R +F  M  ++  +WN  +S     G Y++A+  
Sbjct: 137 AGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTA 196

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F   R +G   +  +  + L++CA   ++ LG+Q+HG  L+ G ++DVSV+N L+  Y  
Sbjct: 197 FIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGK 256

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
              +     +F  + + + VSW S+I ++  ++    +A   +L  R+ G  P      +
Sbjct: 257 CHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDE-EEKACLVFLRARKEGIEPTDFMVSS 315

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           +L+A +  S+ ++G  VH   +K  V     + +AL+  YGKCG ++D E+ F  M E R
Sbjct: 316 VLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPE-R 374

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL--DHFTFATVLSACASVATLERGME 582
           + V+WN+MI GY H      A+ L   M     R+  ++ TF  VLSAC+   ++  GME
Sbjct: 375 NLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGME 434

Query: 583 V-HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYARH 640
           +  +   R  +E      + +VD+  + G ++ A +F   MP+R   S W +++      
Sbjct: 435 IFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMF 494

Query: 641 GHGD----KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           G  +     A  LF    LD    +HV    + +A   AG  +E     K M  V
Sbjct: 495 GKSELGKVAADNLFELDPLDS--GNHVLLSNMFAA---AGRWEEATLVRKEMKDV 544



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 131/533 (24%), Positives = 224/533 (42%), Gaps = 74/533 (13%)

Query: 1   SKDAKLFHLQILKH-GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           S+  +  H QI+K        F+ N L+N+Y ++    SA  L    P+R+ V+W  +++
Sbjct: 22  SRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIA 81

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           G    G    A   F  M R     N +      +A           G QVH L +K+ Q
Sbjct: 82  GSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSP--LVGKQVHALAVKAGQ 139

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D  V      MY S    T+ AR++F+E+  R++ +WN+ +S     G        F 
Sbjct: 140 ISDVFVGCSAFDMY-SKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFI 198

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL--QQILAMVKKAGLLSDLYVGSAL 237
             + EG+    +PN  TF + + A   +    SYL   +Q+   V ++G  +D+ V + L
Sbjct: 199 EFRHEGW----EPNLITFCAFLNACAGA----SYLRLGRQLHGFVLQSGFEADVSVANGL 250

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGL-----------------MEGRRK------ 274
           +  + +      +  IF  + + N VS   +                 +  R++      
Sbjct: 251 IDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTD 310

Query: 275 ------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                             GK VH   +++ +   + VG+ LV+MY KCG+I+D+   F  
Sbjct: 311 FMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDE 370

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNF----CAMRRDGLMSSNF-SLISTLSSCASLG 371
           M  ++ V+WN MI G    G  + A+  F    C   R   ++ N+ + +  LS+C+  G
Sbjct: 371 MPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHR---VAPNYVTFVCVLSACSRAG 427

Query: 372 WIMLGQQIHGEGL--KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNS 428
            + +G +I  E +  + G++        ++ L   AG + +  +    MP    VS W +
Sbjct: 428 SVNVGMEIF-ESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGA 486

Query: 429 VIGA---FADSE-ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
           ++GA   F  SE   V+    + LD   +G   N V   N+ AAA  +    L
Sbjct: 487 LLGASKMFGKSELGKVAADNLFELDPLDSG---NHVLLSNMFAAAGRWEEATL 536



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 18/289 (6%)

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCE 514
           SPN  +  +++ +A S    +LG   HAQ+IK  +    + I N L++ Y K  +  +  
Sbjct: 5   SPN--SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKL-DRPNSA 61

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           ++   ++  R  V+W ++I+G + N     A+     M +   + + FTF     A  S+
Sbjct: 62  QLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSL 121

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
            +   G +VHA  V+A    DV +G +  DMYSK G  + A + FD MP RN+ +WN+ +
Sbjct: 122 RSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYL 181

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
           S     G  D ALT F + + +G  P+ +TF   L+AC+       G  + +   Q++G 
Sbjct: 182 SNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACA-------GASYLRLGRQLHGF 234

Query: 695 IPQ------LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
           + Q      +   + ++D  G+  ++    E I      PN + W +++
Sbjct: 235 VLQSGFEADVSVANGLIDFYGKCHQVG-CSEIIFSGISKPNDVSWCSMI 282


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 275/711 (38%), Positives = 426/711 (59%), Gaps = 15/711 (2%)

Query: 235 SALVSGFARLGNFYYARKIFEQMI----QKNVVSMNGLME------GRRKGKEVHGYLIR 284
           +A+++G+A+LG+   A  +F QM+    + ++++   +++      G + GKE H  +I+
Sbjct: 131 NAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIK 190

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
            G      +G  LV+MY K G++D +R VF  +  +D  ++N MI G  ++G  E+A   
Sbjct: 191 VGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQL 250

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F  M+++G   +  S +S L  C++   +  G+ +H + +  GL  DV V+ AL+ +Y  
Sbjct: 251 FYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMG 310

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
            G +    +VF  M   D VSW  +I  +A++   + +A   +  M+  G  P+ +T+I+
Sbjct: 311 CGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSN-IEDAFGLFATMQEEGIQPDRITYIH 369

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           I+ A +S +   L  ++H+QV++     +  ++ AL+  Y KCG + D  ++F  MS RR
Sbjct: 370 IINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMS-RR 428

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
           D VSW++MI  Y+ N    +A      M +     D  T+  +L+AC  +  L+ GME++
Sbjct: 429 DVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIY 488

Query: 585 ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGD 644
              ++A L   + +G+AL++M  K G I+ A   F+ M  R+V +WN MI GY+ HG+  
Sbjct: 489 TQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAR 548

Query: 645 KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCM 704
           +AL LF +M  +   P+ VTFVGVLSACS AG V+EG + F  +    G++P +E + CM
Sbjct: 549 EALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCM 608

Query: 705 VDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ 764
           VDLLGRAGELD+ E  IN+MP+ PNS IW T+L AC        ++  +AA      EP 
Sbjct: 609 VDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYG--NLDVAERAAERCLMSEPY 666

Query: 765 NAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPE 824
           +   YV L++MYA+ G WE+VAK RK M+   V+KE GC+W+ ++  +H FV  D SHP+
Sbjct: 667 DGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQ 726

Query: 825 KDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKL 883
              IY +L  L   ++  GY+P T+  L ++  + KE+ +SYHSEK+A+A+ VL+  S  
Sbjct: 727 AGEIYAELARLMTAIKREGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGA 786

Query: 884 PIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           PIRI KNLRVCGDCHSA KFISK+ GREI+ RD++RFHHF +G CSCGDYW
Sbjct: 787 PIRIFKNLRVCGDCHSASKFISKVTGREIIARDASRFHHFKNGVCSCGDYW 837



 Score =  248 bits (632), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 158/567 (27%), Positives = 277/567 (48%), Gaps = 52/567 (9%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
            I++ G   +++  NTLI ++   G++  A + FD + ++  V+W  I++GY   G   E
Sbjct: 86  HIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKE 145

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
           A  +F++MV      +      VL AC    P+G K G + H  V+K     D  +   L
Sbjct: 146 AFALFRQMVDEAMEPSIITFLIVLDACSS--PAGLKLGKEFHAQVIKVGFVSDFRIGTAL 203

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           ++MY     S D AR++F+ +  RD+ ++N +I  Y++ GD    F+LF RMQ+EGF   
Sbjct: 204 VSMYVKG-GSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGF--- 259

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
            KPN  +F S++     S        + + A     GL+ D+ V +AL+  +   G+   
Sbjct: 260 -KPNRISFLSILDGC--STPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEG 316

Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRK----------------------------------- 274
           AR++F++M  ++VVS   ++ G  +                                   
Sbjct: 317 ARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACAS 376

Query: 275 ------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
                  +E+H  ++R+G    + V   LV+MYAKCG I D+R VF  M  +D VSW+ M
Sbjct: 377 SADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAM 436

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           I    +NGC EEA   F  M+R+ +     + I+ L++C  LG + LG +I+ + +K  L
Sbjct: 437 IGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADL 496

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
            S + V NAL+++    G + R   +F  M + D V+WN +IG ++       EA+  + 
Sbjct: 497 VSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYS-LHGNAREALDLFD 555

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKC 507
            M +  + PN VTF+ +L+A S     + G +  + ++    +     +   ++   G+ 
Sbjct: 556 RMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRA 615

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMIS 534
           GE+D+ E +  RM  + +   W+++++
Sbjct: 616 GELDEAELLINRMPLKPNSSIWSTLLA 642



 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 139/465 (29%), Positives = 248/465 (53%), Gaps = 4/465 (0%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK+V  ++I+SG    +   N L+ +++ CG + ++R  F  +  K  V+WN +I+G  Q
Sbjct: 80  GKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQ 139

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G  +EA   F  M  + +  S  + +  L +C+S   + LG++ H + +K+G  SD  +
Sbjct: 140 LGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRI 199

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             AL+S+Y   G +    +VF  + + D  ++N +IG +A S     +A + +  M++ G
Sbjct: 200 GTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKS-GDGEKAFQLFYRMQQEG 258

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
           + PN ++F++IL   S+      G  VHAQ +   + ++  +  AL+  Y  CG ++   
Sbjct: 259 FKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGAR 318

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           ++F +M + RD VSW  MI GY  N  +  A  L   M + G + D  T+  +++ACAS 
Sbjct: 319 RVFDKM-KVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASS 377

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
           A L    E+H+  VRA    D+++ +ALV MY+KCG I  A + FD M  R+V SW++MI
Sbjct: 378 ADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMI 437

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
             Y  +G G++A   F  MK +   PD VT++ +L+AC H G +D G + +    +   L
Sbjct: 438 GAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKA-DL 496

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           +  +   + ++++  + G +++       M +  + + W  ++G 
Sbjct: 497 VSHIPVGNALINMNVKHGSIERARYIFENM-VQRDVVTWNVMIGG 540



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 230/474 (48%), Gaps = 52/474 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K FH Q++K GF  D  +   L+++YV+ G +  A ++FD +  R+  ++  ++ GY
Sbjct: 179 KLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGY 238

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   +A ++F  M + GF  NR +  S+L  C    P    +G  VH   + +    
Sbjct: 239 AKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCST--PEALAWGKAVHAQCMNTGLVD 296

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V+  LI MY  C  S + ARR+F++++ RD++SW  +I  Y++  +    F LF+ M
Sbjct: 297 DVRVATALIRMYMGC-GSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATM 355

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           Q EG    ++P+  T+  +I A  SS  +   L ++I + V +AG  +DL V +ALV  +
Sbjct: 356 QEEG----IQPDRITYIHIINACASS--ADLSLAREIHSQVVRAGFGTDLLVDTALVHMY 409

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRK---------- 274
           A+ G    AR++F+ M +++VVS + ++                   +R           
Sbjct: 410 AKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYI 469

Query: 275 --------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                         G E++   I++ L   + VGN L+NM  K G+I+ +R +F  M+ +
Sbjct: 470 NLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQR 529

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D V+WN MI G   +G   EA+  F  M ++    ++ + +  LS+C+  G++  G++  
Sbjct: 530 DVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFF 589

Query: 381 GEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
              L   G+   + +   ++ L   AG L     +   MP     S W++++ A
Sbjct: 590 SYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAA 643



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 5/280 (1%)

Query: 450 MRRAGWSPNGV---TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
           + R G   N +   T++ +           LG QV   +I+          N L+  +  
Sbjct: 49  LHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSI 108

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
           CG M +  + F  + E +  V+WN++I+GY     + +A  L   M+         TF  
Sbjct: 109 CGNMLEARQTFDSV-ENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLI 167

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           VL AC+S A L+ G E HA  ++     D  IG+ALV MY K G +D A + FD +  R+
Sbjct: 168 VLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRD 227

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
           V ++N MI GYA+ G G+KA  LF +M+ +G  P+ ++F+ +L  CS    +  G K   
Sbjct: 228 VSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWG-KAVH 286

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPI 726
           +     GL+  +   + ++ +    G ++      +KM +
Sbjct: 287 AQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKV 326


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 309/837 (36%), Positives = 472/837 (56%), Gaps = 59/837 (7%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A  +F++   RD  S+ S++  +S+ G T    +LF  + R G           F S++ 
Sbjct: 46  AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS----IFSSVLK 101

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
              S+ L      +Q+     K G L D+ VG++LV  + +  NF   RK+F++M ++NV
Sbjct: 102 V--SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159

Query: 263 VSMNGLMEGRRK-----------------------------------------GKEVHGY 281
           V+   L+ G  +                                         G +VH  
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 219

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           ++++GL   + V N L+N+Y KCG +  +R +F     K  V+WN+MISG   NG   EA
Sbjct: 220 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 279

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +  F +MR + +  S  S  S +  CA+L  +   +Q+H   +K G   D ++  AL+  
Sbjct: 280 LGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVA 339

Query: 402 YADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           Y+    +   L++F  +    + VSW ++I  F  ++    EAV  + +M+R G  PN  
Sbjct: 340 YSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDG-KEEAVDLFSEMKRKGVRPNEF 398

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           T+  IL A    S      +VHAQV+K N    +T+  ALL  Y K G++++  K+F+ +
Sbjct: 399 TYSVILTALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGI 454

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV-ATLER 579
            ++ D V+W++M++GY        A+ +   + + G + + FTF+++L+ CA+  A++ +
Sbjct: 455 DDK-DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ 513

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G + H   +++ L+  + + SAL+ MY+K G I+ A   F     +++ SWNSMISGYA+
Sbjct: 514 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQ 573

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
           HG   KAL +F +MK      D VTF+GV +AC+HAGLV+EG K+F  M +   + P  E
Sbjct: 574 HGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKE 633

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
             SCMVDL  RAG+L+K  + I  MP    S IWRT+L A CR + +KTELGR AA  + 
Sbjct: 634 HNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAA-CRVH-KKTELGRLAAEKII 691

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
            M+P+++  YVLL+NMYA  G W++ AK RK M E  VKKE G SW+ +K+  + F+AGD
Sbjct: 692 AMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGD 751

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR 879
            SHP KD IY KL++L+ +++D GY P T + L D++ E KE +++ HSE++A+AF L  
Sbjct: 752 RSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIA 811

Query: 880 NSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF-NDGKCSCGDYW 934
             K  P+ I+KNLRVCGDCH   K I+KI  REIV+RDSNRFHHF +DG CSCGD+W
Sbjct: 812 TPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 180/639 (28%), Positives = 311/639 (48%), Gaps = 73/639 (11%)

Query: 36  LASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRA 95
           L +A  LFD+ P R+  S+  ++ G++  G + EA ++F  + R G  ++     SVL+ 
Sbjct: 43  LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102

Query: 96  ----CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE 151
               C E       FG Q+HC  +K     D  V   L+  Y       D  R++F+E++
Sbjct: 103 SATLCDEL------FGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD-GRKVFDEMK 155

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
            R++++W ++IS Y++      V  LF RMQ EG     +PN +TF + +       + G
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG----TQPNSFTFAAALGVLAEEGVGG 211

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             L  Q+  +V K GL   + V ++L++ + + GN   AR +F++   K+VV+ N ++ G
Sbjct: 212 RGL--QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269

Query: 272 R-----------------------------------------RKGKEVHGYLIRSG-LFD 289
                                                     R  +++H  +++ G LFD
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD 329

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFM--IGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
              +   L+  Y+KC  + D+  +F+ +  +G + VSW  MISG  QN   EEA+  F  
Sbjct: 330 Q-NIRTALMVAYSKCTAMLDALRLFKEIGCVG-NVVSWTAMISGFLQNDGKEEAVDLFSE 387

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M+R G+  + F+    L++      ++   ++H + +K   +   +V  ALL  Y   G 
Sbjct: 388 MKRKGVRPNEFTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGK 443

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL- 466
           +    KVF  + + D V+W++++  +A +      A+K + ++ + G  PN  TF +IL 
Sbjct: 444 VEEAAKVFSGIDDKDIVAWSAMLAGYAQT-GETEAAIKMFGELTKGGIKPNEFTFSSILN 502

Query: 467 -AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
             AA++ SMG+ G Q H   IK  + +   + +ALL+ Y K G ++  E++F R  E +D
Sbjct: 503 VCAATNASMGQ-GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE-KD 560

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
            VSWNSMISGY  +    KA+++   M +R  ++D  TF  V +AC     +E G +   
Sbjct: 561 LVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFD 620

Query: 586 CGVRAC-LEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
             VR C +       S +VD+YS+ G+++ A +  + MP
Sbjct: 621 IMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP 659



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 155/571 (27%), Positives = 271/571 (47%), Gaps = 50/571 (8%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H Q +K GF  DV +  +L++ Y++  +     K+FDEM +RN V+W  ++SGY   
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            M++E   +F  M   G   N +   + L    E G  G   G+QVH +V+K+       
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG--RGLQVHTVVVKNGLDKTIP 230

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           VSN LI +Y  C  +   AR +F++ E + +++WNS+IS Y+  G  +    +F  M+  
Sbjct: 231 VSNSLINLYLKC-GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLN 289

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
             R S    E +F S+I    +  L      +Q+   V K G L D  + +AL+  +++ 
Sbjct: 290 YVRLS----ESSFASVIKLCAN--LKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKC 343

Query: 245 GNFYYARKIFEQM-IQKNVVSMNGLMEG-----------------RRKG----------- 275
                A ++F+++    NVVS   ++ G                 +RKG           
Sbjct: 344 TAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVI 403

Query: 276 ---------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                     EVH  ++++       VG  L++ Y K G ++++  VF  +  KD V+W+
Sbjct: 404 LTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWS 463

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM-LGQQIHGEGLK 385
            M++G  Q G  E AI  F  + + G+  + F+  S L+ CA+    M  G+Q HG  +K
Sbjct: 464 AMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK 523

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
             LDS + VS+ALL++YA  G +    +VF    E D VSWNS+I  +A       +A+ 
Sbjct: 524 SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYA-QHGQAMKALD 582

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCY 504
            + +M++     +GVTFI + AA +   + + G +    +++   +A      + ++  Y
Sbjct: 583 VFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLY 642

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
            + G+++   K+   M        W ++++ 
Sbjct: 643 SRAGQLEKAMKVIENMPNPAGSTIWRTILAA 673



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 153/556 (27%), Positives = 261/556 (46%), Gaps = 47/556 (8%)

Query: 294 GNGLVNMYAKC-GTIDDSR-----SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
            NG+  +   C GT+  SR     ++F    G+D  S+ +++ G  ++G  +EA   F  
Sbjct: 24  ANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLN 83

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           + R G+        S L   A+L   + G+Q+H + +K G   DVSV  +L+  Y     
Sbjct: 84  IHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSN 143

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
                KVF  M E + V+W ++I  +A + ++  E +  ++ M+  G  PN  TF   L 
Sbjct: 144 FKDGRKVFDEMKERNVVTWTTLISGYARN-SMNDEVLTLFMRMQNEGTQPNSFTFAAALG 202

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
             +   +G  G QVH  V+K  +     + N+L++ Y KCG +     +F + +E +  V
Sbjct: 203 VLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDK-TEVKSVV 261

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           +WNSMISGY  N L  +A+ + + M     RL   +FA+V+  CA++  L    ++H   
Sbjct: 262 TWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSV 321

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFF-DLMPVRNVYSWNSMISGYARHGHGDKA 646
           V+    FD  I +AL+  YSKC  +  A R F ++  V NV SW +MISG+ ++   ++A
Sbjct: 322 VKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEA 381

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACS-------HAGLVDEGFKHFKSMS----QVYGLI 695
           + LFS+MK  G  P+  T+  +L+A         HA +V   ++   ++       Y  +
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKL 441

Query: 696 PQLEQ---------------FSCMVDLLGRAGELD-KIEEF--INKMPITPNSLIWRTVL 737
            ++E+               +S M+    + GE +  I+ F  + K  I PN   + ++L
Sbjct: 442 GKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSIL 501

Query: 738 GACCRANCRKTELGRKAANMLFE--MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
             C   N    + G++      +  ++    V+  LL  MYA  G  E   +  K  +E 
Sbjct: 502 NVCAATNASMGQ-GKQFHGFAIKSRLDSSLCVSSALL-TMYAKKGNIESAEEVFKRQREK 559

Query: 796 EVKKEAGCSWVTMKDG 811
           ++      SW +M  G
Sbjct: 560 DL-----VSWNSMISG 570


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 305/839 (36%), Positives = 463/839 (55%), Gaps = 64/839 (7%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A+++F++   RDL   N ++  YS+   T     LF  + R G    L P+ YT   ++ 
Sbjct: 55  AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSG----LSPDSYTMSCVL- 109

Query: 203 AAYSSVLSGSY---LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
               SV +GS+   + +Q+     K GL+  L VG++LV  + + GN    R++F++M  
Sbjct: 110 ----SVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGD 165

Query: 260 KNVVSMNGLM---------------------EGRRK--------------------GKEV 278
           ++VVS N L+                     EG R                     G ++
Sbjct: 166 RDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQI 225

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H  +++ G      V N L++M +K G + D+R VF  M  KDSVSWN+MI+G   NG  
Sbjct: 226 HALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQD 285

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
            EA   F  M+  G   ++ +  S + SCASL  + L + +H + LK GL ++ +V  AL
Sbjct: 286 LEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTAL 345

Query: 399 LSLYADAGYLSRCLKVFFLMPE-HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           +        +     +F LM      VSW ++I  +  +     +AV  +  MRR G  P
Sbjct: 346 MVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQN-GDTDQAVNLFSLMRREGVKP 404

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           N  T+  IL    +  +     ++HA+VIK N    +++  ALL  + K G + D  K+F
Sbjct: 405 NHFTYSTILTVQHAVFIS----EIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVF 460

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC-ASVAT 576
             + E +D ++W++M++GY       +A  +   + + G + + FTF ++++AC A  A+
Sbjct: 461 -ELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTAS 519

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           +E+G + HA  ++  L   + + S+LV +Y+K G I+ A   F     R++ SWNSMISG
Sbjct: 520 VEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISG 579

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           YA+HG   KAL +F +M+      D +TF+GV+SAC+HAGLV +G  +F  M   + + P
Sbjct: 580 YAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINP 639

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAAN 756
            +E +SCM+DL  RAG L K  + IN MP  P + +WR VL A  R + R  ELG+ AA 
Sbjct: 640 TMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAA-SRVH-RNIELGKLAAE 697

Query: 757 MLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV 816
            +  +EPQ++  YVLL+N+YA+ G W +    RK M +  VKKE G SW+ +K+  + F+
Sbjct: 698 KIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFL 757

Query: 817 AGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFV 876
           AGD SHP  D IY KL ELN ++RD GY P T +   D+E E KE ++S+HSE++A+AF 
Sbjct: 758 AGDLSHPLSDHIYSKLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFG 817

Query: 877 LTRN-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           L     ++P++I+KNLRVCGDCHS  K +S +  R IV+RDSNRFHHF  G CSCGDYW
Sbjct: 818 LIATLPEIPLQIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876



 Score =  251 bits (642), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 190/647 (29%), Positives = 302/647 (46%), Gaps = 79/647 (12%)

Query: 31  VRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
           +R  D   A +LFD+ P R+      ++  Y+    + EA  +F  + R+G   + Y + 
Sbjct: 47  LRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMS 106

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
            VL  C   G      G QVHC  +K        V N L+ MY       D  RR+F+E+
Sbjct: 107 CVLSVC--AGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRD-GRRVFDEM 163

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLS 210
             RD++SWNS+++ YS       V++LF  MQ EG+R    P+ YT  ++I A  +    
Sbjct: 164 GDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYR----PDYYTVSTVIAALANQ--G 217

Query: 211 GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
              +  QI A+V K G  ++  V ++L+S  ++ G    AR +F+ M  K+ VS N ++ 
Sbjct: 218 AVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIA 277

Query: 271 GRR-KGKE----------------------------------------VHGYLIRSGLFD 289
           G    G++                                        +H   ++SGL  
Sbjct: 278 GHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLST 337

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS-VSWNTMISGLDQNGCYEEAIMNFCAM 348
              V   L+    KC  IDD+ S+F  M G  S VSW  MISG  QNG  ++A+  F  M
Sbjct: 338 NQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLM 397

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           RR+G+  ++F    T S+  ++   +   +IH E +K   +   SV  ALL  +   G +
Sbjct: 398 RREGVKPNHF----TYSTILTVQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNI 453

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
           S  +KVF L+   D ++W++++  +A +     EA K +  + R G  PN  TF +I+ A
Sbjct: 454 SDAVKVFELIETKDVIAWSAMLAGYAQA-GETEEAAKIFHQLTREGIKPNEFTFCSIINA 512

Query: 469 ASSFSMG-KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
            ++ +   + G Q HA  IK  + N   + ++L++ Y K G ++   +IF R  E RD V
Sbjct: 513 CTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKE-RDLV 571

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           SWNSMISGY  +    KA+ +   M +R   +D  TF  V+SACA    + +G       
Sbjct: 572 SWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNY---- 627

Query: 588 VRACLEFDVVIG-----------SALVDMYSKCGRIDYASRFFDLMP 623
                 F+++I            S ++D+YS+ G +  A    + MP
Sbjct: 628 ------FNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMP 668



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 249/500 (49%), Gaps = 49/500 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q +K G  + + + N+L+++Y + G++    ++FDEM DR+ VSW  +++GY+    +
Sbjct: 125 HCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFN 184

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           ++  ++F  M   G+  + Y + +V+ A    G      GMQ+H LV+K     + LV N
Sbjct: 185 DQVWELFCLMQVEGYRPDYYTVSTVIAALANQG--AVAIGMQIHALVVKLGFETERLVCN 242

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI+M        D AR +F+ +E +D +SWNS+I+ +   G  +  F+ F+ MQ  G  
Sbjct: 243 SLISMLSKSGMLRD-ARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAG-- 299

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
              KP   TF S+I +  S  L    L++ +     K+GL ++  V +AL+    +    
Sbjct: 300 --AKPTHATFASVIKSCAS--LKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEI 355

Query: 248 YYARKIFEQMIQ-KNVVSMNGLMEG-----------------RRKG-------------- 275
             A  +F  M   ++VVS   ++ G                 RR+G              
Sbjct: 356 DDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTV 415

Query: 276 ------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
                  E+H  +I++      +VG  L++ + K G I D+  VF  +  KD ++W+ M+
Sbjct: 416 QHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAML 475

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC-ASLGWIMLGQQIHGEGLKLGL 388
           +G  Q G  EEA   F  + R+G+  + F+  S +++C A    +  G+Q H   +KL L
Sbjct: 476 AGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRL 535

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           ++ + VS++L++LYA  G +    ++F    E D VSWNS+I  +A       +A++ + 
Sbjct: 536 NNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQ-HGQAKKALEVFE 594

Query: 449 DMRRAGWSPNGVTFINILAA 468
           +M++     + +TFI +++A
Sbjct: 595 EMQKRNLEVDAITFIGVISA 614



 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 219/471 (46%), Gaps = 58/471 (12%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  ++K GF  +  +CN+LI++  + G L  A  +FD M +++SVSW  +++G+   G 
Sbjct: 225 IHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQ 284

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA + F  M  AG         SV+++C      G      +HC  LKS  + +  V 
Sbjct: 285 DLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLV--RVLHCKTLKSGLSTNQNVL 342

Query: 127 NVLIAMYGSCLESTDCARRIFEEIE-TRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
             L+     C E  D A  +F  +   + ++SW ++IS Y Q GDT     LFS M+REG
Sbjct: 343 TALMVALTKCKEIDD-AFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREG 401

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
               +KPN +T+ +++T  ++  +S      +I A V K        VG+AL+  F ++G
Sbjct: 402 ----VKPNHFTYSTILTVQHAVFIS------EIHAEVIKTNYEKSSSVGTALLDAFVKIG 451

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGR--------------------------------- 272
           N   A K+FE +  K+V++ + ++ G                                  
Sbjct: 452 NISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIIN 511

Query: 273 ---------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                     +GK+ H Y I+  L + + V + LV +YAK G I+ +  +F+    +D V
Sbjct: 512 ACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLV 571

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SWN+MISG  Q+G  ++A+  F  M++  L     + I  +S+CA  G +  GQ      
Sbjct: 572 SWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIM 631

Query: 384 LK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
           +    ++  +   + ++ LY+ AG L + + +   MP     + W  V+ A
Sbjct: 632 INDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAA 682



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 53/102 (51%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K FH   +K      + + ++L+ +Y + G++ SA ++F    +R+ VSW  ++SGY
Sbjct: 521 EQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGY 580

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSG 103
              G + +A ++F+EM +    ++      V+ AC   G  G
Sbjct: 581 AQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVG 622



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 5/103 (4%)

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC- 672
           +A + FD  P+R++   N ++  Y+R     +AL LF  +   G  PD  T   VLS C 
Sbjct: 54  FAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCA 113

Query: 673 -SHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
            S  G V E   H + +    GL+  L   + +VD+  + G +
Sbjct: 114 GSFNGTVGEQV-HCQCVK--CGLVHHLSVGNSLVDMYTKTGNV 153


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 303/792 (38%), Positives = 455/792 (57%), Gaps = 49/792 (6%)

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSSVLSG 211
           D +  NS+I++YS+  D I+ F +F  M+        K +  ++ S+I+  A   + L  
Sbjct: 86  DTLLLNSLITLYSKSNDPITAFSIFQSMENS------KRDVVSYSSIISCFANNRNCLKA 139

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             +  Q+L    + G+  + Y  +A++    + G F                        
Sbjct: 140 VEMFDQLLL---QDGVYPNEYCFTAVIRACLKGGFF------------------------ 172

Query: 272 RRKGKEVHGYLIRSGLFD-MVAVGNGLVNMYAKCGTIDD---SRSVFRFMIGKDSVSWNT 327
            + G  + G+++++G FD  V VG  L++M+ K  ++ D   +R VF  M  K+ V+W  
Sbjct: 173 -KTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTL 231

Query: 328 MISGLDQNGCYEEAIMNFCAMR-RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
           MI+ L Q G  +EAI  F  M    G +   F+L   +S CA + ++ LG+++H   ++ 
Sbjct: 232 MITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRS 291

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA-DSEALVSEAVK 445
           GL  D+ V  +L+ +YA  G +    KVF  M EH+ +SW +++  +         EA++
Sbjct: 292 GLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMR 351

Query: 446 YYLDMR-RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
            + +M  + G +PN  TF  +L A +S      G QVH Q IK  ++    + N L+S Y
Sbjct: 352 MFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVY 411

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            K G M+   K F  + E+ + VS   +    + +  L    +L   +   G  +  FT+
Sbjct: 412 AKSGRMESARKCFDVLFEK-NLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTY 470

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
           A++LS  A + T+ +G ++HA  V+     D+ + +AL+ MYSKCG  + A + F+ M  
Sbjct: 471 ASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMED 530

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
            NV +W S+I+G+A+HG   KAL LF  M   G  P+ VT++ VLSACSH GL+DE +KH
Sbjct: 531 CNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKH 590

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           F SM   +G++P++E ++CMVDLLGR+G L +  EFIN MP   ++L+WRT LG+ CR +
Sbjct: 591 FTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGS-CRVH 649

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
            R T+LG  AA M+ E EP +   Y+LL+N+YA+ G+WEDVA  RK MK+ ++ KEAG S
Sbjct: 650 -RNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSS 708

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLV 864
           W+ +++ VH F  GD  HP+   IYEKL EL  K+++ GYVP T F L D+E E KE  +
Sbjct: 709 WIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYL 768

Query: 865 SYHSEKIAVAFVL--TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHH 922
             HSEK+AVAF L  T N K PIR+ KNLRVCGDCH+A K+IS + GREIV+RD+NRFHH
Sbjct: 769 FQHSEKLAVAFALISTPNPK-PIRVFKNLRVCGDCHTAIKYISMVSGREIVVRDANRFHH 827

Query: 923 FNDGKCSCGDYW 934
             DG CSC DYW
Sbjct: 828 MKDGTCSCNDYW 839



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 151/523 (28%), Positives = 254/523 (48%), Gaps = 70/523 (13%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVSGY 61
            KL H ++       D  L N+LI +Y +  D  +A  +F  M +  R+ VS++ I+S +
Sbjct: 71  GKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCF 130

Query: 62  THKGMSNEACKMFKE-MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
            +     +A +MF + +++ G   N Y   +V+RAC + G   FK G+ +   VLK+   
Sbjct: 131 ANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGG--FFKTGLCLFGFVLKTGY- 187

Query: 121 FDG--LVSNVLIAMY--GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
           FD    V   LI M+  G  L   + AR++F+++  +++++W  +I+  +Q G       
Sbjct: 188 FDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAID 247

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS 235
           LF  M          P+ +T   LI+  A    LS   L +++ + V ++GL+ DL VG 
Sbjct: 248 LFLEMLVSS---GYVPDRFTLTGLISVCAEIQFLS---LGKELHSWVIRSGLVLDLCVGC 301

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK--------------------- 274
           +LV  +A+ G    ARK+F+ M + NV+S   L+ G  +                     
Sbjct: 302 SLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGG 361

Query: 275 -----------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
                                  G++VHG  I+ GL  +  VGNGLV++YAK G ++ +R
Sbjct: 362 VAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESAR 421

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD----GLMSSNFSLISTLSSC 367
             F  +  K+ VS       +D     +  + +   + R+    G   S+F+  S LS  
Sbjct: 422 KCFDVLFEKNLVSETV----VDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGA 477

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
           A +G I  G+QIH   +K+G  +D+SV+NAL+S+Y+  G     L+VF  M + + ++W 
Sbjct: 478 ACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWT 537

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
           S+I  FA      S+A++ + +M   G  PN VT+I +L+A S
Sbjct: 538 SIINGFA-KHGFASKALELFYNMLETGVKPNDVTYIAVLSACS 579



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 230/474 (48%), Gaps = 62/474 (13%)

Query: 11  ILKHGFAYDVFLCN--TLINVYVR---VGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           +LK G+ +D  +C    LI+++V+   + DL SA K+FD+M ++N V+W  +++     G
Sbjct: 182 VLKTGY-FDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYG 240

Query: 66  MSNEACKMFKEM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            ++EA  +F EM V +G++ +R+ L  ++  C E        G ++H  V++S    D  
Sbjct: 241 YNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEI--QFLSLGKELHSWVIRSGLVLDLC 298

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTI--SVFKLFSRMQ 182
           V   L+ MY  C    + AR++F+ +   +++SW ++++ Y + G        ++FS M 
Sbjct: 299 VGCSLVDMYAKCGLVQE-ARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNML 357

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            +G    + PN +TF  ++ A  S  L      +Q+     K GL +   VG+ LVS +A
Sbjct: 358 LQG---GVAPNCFTFSGVLKACAS--LPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYA 412

Query: 243 RLGNFYYARKIFEQMIQKNVVS-------------MNGLMEGRR---------------- 273
           + G    ARK F+ + +KN+VS             +N   +  R                
Sbjct: 413 KSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYAS 472

Query: 274 ------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                       KG+++H  +++ G    ++V N L++MY+KCG  + +  VF  M   +
Sbjct: 473 LLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCN 532

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            ++W ++I+G  ++G   +A+  F  M   G+  ++ + I+ LS+C+ +G I    + H 
Sbjct: 533 VITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWK-HF 591

Query: 382 EGLK--LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
             ++   G+   +     ++ L   +G LS  ++    MP + D + W + +G+
Sbjct: 592 TSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGS 645



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 125/539 (23%), Positives = 243/539 (45%), Gaps = 32/539 (5%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG--KDSVSWNTMISGL 332
           GK +H  L  S L     + N L+ +Y+K      + S+F+ M    +D VS++++IS  
Sbjct: 71  GKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCF 130

Query: 333 DQN-GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG-LDS 390
             N  C +   M    + +DG+  + +   + + +C   G+   G  + G  LK G  DS
Sbjct: 131 ANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDS 190

Query: 391 DVSVSNALLSLYADA---GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
            V V   L+ ++        L    KVF  M E + V+W  +I   A       EA+  +
Sbjct: 191 HVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQY-GYNDEAIDLF 249

Query: 448 LDMR-RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
           L+M   +G+ P+  T   +++  +      LG ++H+ VI+  +  +  +  +L+  Y K
Sbjct: 250 LEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAK 309

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYI------HNELLPKAMNLVWFMMQRGQRLD 560
           CG + +  K+F  M E  + +SW ++++GY+        E +    N+   ++Q G   +
Sbjct: 310 CGLVQEARKVFDGMRE-HNVMSWTALVNGYVRGGGGYEREAMRMFSNM---LLQGGVAPN 365

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
            FTF+ VL ACAS+   + G +VH   ++  L     +G+ LV +Y+K GR++ A + FD
Sbjct: 366 CFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFD 425

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
           ++  +N+ S   +     +  + +    L  +++  G      T+  +LS  +  G + +
Sbjct: 426 VLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGK 485

Query: 681 GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC 740
           G +   +M    G    L   + ++ +  + G  +   +  N M    N + W +++   
Sbjct: 486 G-EQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDME-DCNVITWTSIINGF 543

Query: 741 CRANCRKTELGRKAANMLFEM-----EPQNAVNYVLLANMYASGGKWEDVAKARKAMKE 794
                 K     KA  + + M     +P N V Y+ + +  +  G  ++  K   +M++
Sbjct: 544 A-----KHGFASKALELFYNMLETGVKP-NDVTYIAVLSACSHVGLIDEAWKHFTSMRD 596



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 172/361 (47%), Gaps = 21/361 (5%)

Query: 351 DGLMSSNFSLIST---LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           D   + N  LI++   L  C       LG+ +H +     L  D  + N+L++LY+ +  
Sbjct: 43  DTESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSND 102

Query: 408 LSRCLKVFFLM--PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
                 +F  M   + D VS++S+I  FA++   +     +   + + G  PN   F  +
Sbjct: 103 PITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAV 162

Query: 466 LAAASSFSMGKLGHQVHAQVIKYN-VANETTIENALLSCYGKCGEMDDCE---KIFARMS 521
           + A       K G  +   V+K     +   +   L+  + K   + D E   K+F +M 
Sbjct: 163 IRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMR 222

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMM-QRGQRLDHFTFATVLSACASVATLERG 580
           E ++ V+W  MI+         +A++L   M+   G   D FT   ++S CA +  L  G
Sbjct: 223 E-KNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLG 281

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
            E+H+  +R+ L  D+ +G +LVDMY+KCG +  A + FD M   NV SW ++++GY R 
Sbjct: 282 KELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRG 341

Query: 641 GHG--DKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
           G G   +A+ +FS M L G + P+  TF GVL AC  A L D  F       QV+G   +
Sbjct: 342 GGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKAC--ASLPDFDFG-----EQVHGQTIK 394

Query: 698 L 698
           L
Sbjct: 395 L 395



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 194/433 (44%), Gaps = 59/433 (13%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  +++ G   D+ +  +L+++Y + G +  A K+FD M + N +SW  +V+GY  
Sbjct: 281 GKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVR 340

Query: 64  --KGMSNEACKMFKEM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
              G   EA +MF  M ++ G   N +    VL+AC       F FG QVH   +K   +
Sbjct: 341 GGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASL--PDFDFGEQVHGQTIKLGLS 398

Query: 121 FDGLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDT-ISVFKL 177
               V N L+++Y     +ES   AR+ F+ +  ++L+S   +        DT +  F L
Sbjct: 399 AIDCVGNGLVSVYAKSGRMES---ARKCFDVLFEKNLVSETVV-------DDTNVKDFNL 448

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL------QQILAMVKKAGLLSDL 231
            S    +      +  EY    + +  Y+S+LSG+  +      +QI AMV K G  +DL
Sbjct: 449 NSEQDLD------REVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDL 502

Query: 232 YVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS--GLFD 289
            V +AL+S +++ GN   A ++F  M   NV++   ++ G  K    HG+  ++    ++
Sbjct: 503 SVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAK----HGFASKALELFYN 558

Query: 290 MVAVGN--------GLVNMYAKCGTIDDSRSVFRFMIGKDSV-----SWNTMISGLDQNG 336
           M+  G          +++  +  G ID++   F  M     +      +  M+  L ++G
Sbjct: 559 MLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSG 618

Query: 337 CYEEAI--MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
              EAI  +N      D L+   F     L SC       LG+  H   + L  +     
Sbjct: 619 LLSEAIEFINSMPFDADALVWRTF-----LGSCRVHRNTKLGE--HAAKMILEREPHDPA 671

Query: 395 SNALLS-LYADAG 406
           +  LLS LYA  G
Sbjct: 672 TYILLSNLYATEG 684



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 141/292 (48%), Gaps = 10/292 (3%)

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM-SERRDEVSWNSMISG 535
           LG  +H ++   N+  +T + N+L++ Y K  +      IF  M + +RD VS++S+IS 
Sbjct: 70  LGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISC 129

Query: 536 YIHNELLPKAMNLV-WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA-CLE 593
           + +N    KA+ +    ++Q G   + + F  V+ AC      + G+ +    ++    +
Sbjct: 130 FANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFD 189

Query: 594 FDVVIGSALVDMYSK-CGRIDY--ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
             V +G  L+DM+ K C   D   A + FD M  +NV +W  MI+  A++G+ D+A+ LF
Sbjct: 190 SHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLF 249

Query: 651 SQMKL-DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
            +M +  G +PD  T  G++S C+    +  G K   S     GL+  L     +VD+  
Sbjct: 250 LEMLVSSGYVPDRFTLTGLISVCAEIQFLSLG-KELHSWVIRSGLVLDLCVGCSLVDMYA 308

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCR-ANCRKTELGRKAANMLFE 760
           + G + +  +  + M    N + W  ++    R     + E  R  +NML +
Sbjct: 309 KCGLVQEARKVFDGMR-EHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQ 359


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 297/868 (34%), Positives = 470/868 (54%), Gaps = 54/868 (6%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR 168
           ++H L++        + S  LIA Y    + T           + ++  WNSII   +  
Sbjct: 34  KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93

Query: 169 GDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL 228
           G       L+S  QR      L+P+ YTF S+I A   + L    + + I   V   G  
Sbjct: 94  GLFSEALSLYSETQR----IRLQPDTYTFPSVINAC--AGLLDFEMAKSIHDRVLDMGFG 147

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------------- 272
           SDLY+G+AL+  + R  +   ARK+FE+M  ++VVS N L+ G                 
Sbjct: 148 SDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRF 207

Query: 273 -------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
                                     +G  +HG + + G+   V V NGL++MY K   +
Sbjct: 208 RNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGL 267

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
            D R +F  M+ +D+VSWNTMI G  Q G YEE+I  F  M  +       ++ S L +C
Sbjct: 268 IDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQFKPDLLTITSILQAC 326

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
             LG +  G+ +H   +  G + D + SN L+++YA  G L    +VF  M   D VSWN
Sbjct: 327 GHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWN 386

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           S+I  +  + +   EA+K +  M +    P+ VT++ +L+ ++      LG ++H  + K
Sbjct: 387 SMINVYIQNGSF-DEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAK 444

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
               +   + N L+  Y KCGEM D  K+F  M + RD ++WN++I+  +H+E     + 
Sbjct: 445 MGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENM-KARDIITWNTIIASCVHSEDCNLGLR 503

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
           ++  M   G   D  T  ++L  C+ +A   +G E+H C  +  LE DV +G+ L++MYS
Sbjct: 504 MISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYS 563

Query: 608 KCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVG 667
           KCG +  + + F LM  ++V +W ++IS    +G G KA+  F +M+  G +PDHV FV 
Sbjct: 564 KCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVA 623

Query: 668 VLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPIT 727
           ++ ACSH+GLV+EG  +F  M + Y + P++E ++C+VDLL R+  LDK E+FI  MP+ 
Sbjct: 624 IIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLK 683

Query: 728 PNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
           P+S IW  +L AC  +    TE+  + +  + E+ P +   YVL++N+YA+ GKW+ V  
Sbjct: 684 PDSSIWGALLSACRMSG--DTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRS 741

Query: 788 ARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQ 847
            RK++K   +KK+ GCSW+ +++ V+VF  G +   + + + + L  L   M   GY+  
Sbjct: 742 IRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIAN 801

Query: 848 TKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISK 906
            +F L D++ + K D++  HSE++A+AF +L      P+++MKNLRVC DCH+  K+ISK
Sbjct: 802 LQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISK 861

Query: 907 IVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           IV RE+++RD+NRFH F DG CSCGDYW
Sbjct: 862 IVQRELLVRDANRFHVFKDGACSCGDYW 889



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 194/685 (28%), Positives = 317/685 (46%), Gaps = 59/685 (8%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD-EMPDRNSVSWACIVSGYTHKG 65
            H  I+  G  + V     LI  Y    D  S+  +F    P  N   W  I+   TH G
Sbjct: 35  LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNG 94

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
           + +EA  ++ E  R     + Y   SV+ AC   G   F+    +H  VL      D  +
Sbjct: 95  LFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLLDFEMAKSIHDRVLDMGFGSDLYI 152

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
            N LI MY       D AR++FEE+  RD++SWNS+IS Y+  G      +++ R +  G
Sbjct: 153 GNALIDMYCR-FNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLG 211

Query: 186 FRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
               + P+ YT  S++ A     SV  G      I  +++K G+  D+ V + L+S + +
Sbjct: 212 ----VVPDSYTMSSVLRACGGLGSVEEGDI----IHGLIEKIGIKKDVIVNNGLLSMYCK 263

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------------------------- 274
                  R+IF++M+ ++ VS N ++ G  +                             
Sbjct: 264 FNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSIL 323

Query: 275 -----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      GK VH Y+I SG        N L+NMYAKCG +  S+ VF  M  KDSV
Sbjct: 324 QACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSV 383

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SWN+MI+   QNG ++EA+  F  M+ D +   + + +  LS    LG + LG+++H + 
Sbjct: 384 SWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLHLGKELHCDL 442

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
            K+G +S++ VSN L+ +YA  G +   LKVF  M   D ++WN++I +   SE   +  
Sbjct: 443 AKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSED-CNLG 501

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           ++    MR  G +P+  T ++IL   S  +  + G ++H  + K  + ++  + N L+  
Sbjct: 502 LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEM 561

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           Y KCG + +  ++F  M + +D V+W ++IS         KA+     M   G   DH  
Sbjct: 562 YSKCGSLRNSFQVFKLM-KTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVA 620

Query: 564 FATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           F  ++ AC+    +E G+   H       +E  +   + +VD+ S+   +D A  F   M
Sbjct: 621 FVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSM 680

Query: 623 PVRNVYS-WNSMISGYARHGHGDKA 646
           P++   S W +++S     G  + A
Sbjct: 681 PLKPDSSIWGALLSACRMSGDTEIA 705



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 168/570 (29%), Positives = 275/570 (48%), Gaps = 46/570 (8%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H ++L  GF  D+++ N LI++Y R  DL  A K+F+EMP R+ VSW  ++SGY  
Sbjct: 134 AKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNA 193

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G  NEA +++      G + + Y + SVLRAC   G    + G  +H L+ K     D 
Sbjct: 194 NGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACG--GLGSVEEGDIIHGLIEKIGIKKDV 251

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-- 181
           +V+N L++MY       D  RRIF+++  RD +SWN++I  YSQ G      KLF  M  
Sbjct: 252 IVNNGLLSMYCKFNGLID-GRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN 310

Query: 182 -------------QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL 228
                        Q  G    L+  +Y    +IT+ Y    + S +L  + A        
Sbjct: 311 QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLAS 370

Query: 229 SDLYVG---------SALVSGFARLGNFYYARKIFEQMIQKNV----------VSMNGLM 269
            +++ G         +++++ + + G+F  A K+F +M++ +V          +SM+  +
Sbjct: 371 QEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQL 429

Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
                GKE+H  L + G    + V N LV+MYAKCG + DS  VF  M  +D ++WNT+I
Sbjct: 430 GDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTII 489

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
           +    +      +     MR +G+     +++S L  C+ L     G++IHG   KLGL+
Sbjct: 490 ASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLE 549

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI---GAFADSEALVSEAVKY 446
           SDV V N L+ +Y+  G L    +VF LM   D V+W ++I   G + + +    +AV+ 
Sbjct: 550 SDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGK----KAVRA 605

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYG 505
           + +M  AG  P+ V F+ I+ A S   + + G +  H     Y +         ++    
Sbjct: 606 FGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLS 665

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           +   +D  E     M  + D   W +++S 
Sbjct: 666 RSALLDKAEDFILSMPLKPDSSIWGALLSA 695



 Score =  226 bits (576), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 167/634 (26%), Positives = 301/634 (47%), Gaps = 34/634 (5%)

Query: 145 RIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA 204
           R+  E   + L S  SI    +    T  + KL S +   G  +S+      F + + A 
Sbjct: 5   RVLHECSRQTLFS--SISRALASAATTTQLHKLHSLIITLGLHHSV-----IFSAKLIAK 57

Query: 205 YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM----IQK 260
           Y+     +       ++ + A   +++Y+ ++++      G F  A  ++ +     +Q 
Sbjct: 58  YAHFRDPT----SSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQP 113

Query: 261 NVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
           +  +   ++            K +H  ++  G    + +GN L++MY +   +D +R VF
Sbjct: 114 DTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVF 173

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             M  +D VSWN++ISG + NG + EA+  +   R  G++  ++++ S L +C  LG + 
Sbjct: 174 EEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVE 233

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
            G  IHG   K+G+  DV V+N LLS+Y     L    ++F  M   D VSWN++I  ++
Sbjct: 234 EGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYS 293

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANET 494
               L  E++K +++M    + P+ +T  +IL A       + G  VH  +I      +T
Sbjct: 294 QV-GLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDT 351

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
           T  N L++ Y KCG +   +++F+ M + +D VSWNSMI+ YI N    +AM L + MM+
Sbjct: 352 TASNILINMYAKCGNLLASQEVFSGM-KCKDSVSWNSMINVYIQNGSFDEAMKL-FKMMK 409

Query: 555 RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
              + D  T+  +LS    +  L  G E+H    +     ++V+ + LVDMY+KCG +  
Sbjct: 410 TDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGD 469

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
           + + F+ M  R++ +WN++I+        +  L + S+M+ +G  PD  T + +L  CS 
Sbjct: 470 SLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSL 529

Query: 675 AGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL-DKIEEFINKMPITPNSLIW 733
                +G K         GL   +   + ++++  + G L +  + F  K+  T + + W
Sbjct: 530 LAAKRQG-KEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVF--KLMKTKDVVTW 586

Query: 734 RTVLGACCRANCRKTELGRKAANMLFEMEPQNAV 767
             ++ AC          G+KA     EME    V
Sbjct: 587 TALISACGMYG-----EGKKAVRAFGEMEAAGIV 615



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 226/474 (47%), Gaps = 54/474 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++  + H  I K G   DV + N L+++Y +   L    ++FD+M  R++VSW  ++ GY
Sbjct: 233 EEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGY 292

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G+  E+ K+F EMV   F  +   + S+L+AC   G    +FG  VH  ++ S    
Sbjct: 293 SQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGD--LEFGKYVHDYMITSGYEC 349

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D   SN+LI MY  C  +   ++ +F  ++ +D +SWNS+I+VY Q G      KLF  M
Sbjct: 350 DTTASNILINMYAKC-GNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMM 408

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           + +     +KP+  T+  L++   S+ L   +L +++   + K G  S++ V + LV  +
Sbjct: 409 KTD-----VKPDSVTYVMLLSM--STQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMY 461

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMN----------------------------------- 266
           A+ G    + K+FE M  +++++ N                                   
Sbjct: 462 AKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATML 521

Query: 267 ------GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                  L+  +R+GKE+HG + + GL   V VGN L+ MY+KCG++ +S  VF+ M  K
Sbjct: 522 SILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK 581

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQI 379
           D V+W  +IS     G  ++A+  F  M   G++  + + ++ + +C+  G +  G    
Sbjct: 582 DVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYF 641

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           H       ++  +     ++ L + +  L +       MP + D   W +++ A
Sbjct: 642 HRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSA 695


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 296/868 (34%), Positives = 470/868 (54%), Gaps = 54/868 (6%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR 168
           ++H L++        + S  LIA Y    + T           + ++  WNSII   +  
Sbjct: 93  KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHN 152

Query: 169 GDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL 228
           G       L+S  QR      L+P+ YTF S+I A   + L    + + I   V   G  
Sbjct: 153 GLFSEALSLYSETQR----IRLQPDTYTFPSVINAC--AGLLDFEMAKSIHDRVLXMGFG 206

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------------- 272
           SDLY+G+AL+  + R  +   ARK+FE+M  ++VVS N L+ G                 
Sbjct: 207 SDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRF 266

Query: 273 -------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
                                     +G  +HG + + G+   V V NGL++MY K   +
Sbjct: 267 RNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGL 326

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
            D R +F  M+ +D+VSWNTMI G  Q G YEE+I  F  M  +       ++ S L +C
Sbjct: 327 IDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQFKPDLLTITSILQAC 385

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
             LG +  G+ +H   +  G + D + SN L+++YA  G L    +VF  M   D VSWN
Sbjct: 386 GHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWN 445

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           S+I  +  + +   EA+K +  M +    P+ VT++ +L+ ++      LG ++H  + K
Sbjct: 446 SMINVYIQNGSF-DEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAK 503

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
               +   + N L+  Y KCGEM D  K+F  M + RD ++WN++I+  +H+E     + 
Sbjct: 504 MGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENM-KARDIITWNTIIASCVHSEDCNLGLR 562

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
           ++  M   G   D  T  ++L  C+ +A   +G E+H C  +  LE DV +G+ L++MYS
Sbjct: 563 MISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYS 622

Query: 608 KCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVG 667
           KCG +  + + F LM  ++V +W ++IS    +G G KA+  F +M+  G +PDHV FV 
Sbjct: 623 KCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVA 682

Query: 668 VLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPIT 727
           ++ ACSH+GLV+EG  +F  M + Y + P++E ++C+VDLL R+  LDK E+FI  MP+ 
Sbjct: 683 IIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLK 742

Query: 728 PNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
           P+S IW  +L AC  +    TE+ ++ +  + E+ P +   YVL++N+YA+ GKW+ V  
Sbjct: 743 PDSSIWGALLSACRMSG--DTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRS 800

Query: 788 ARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQ 847
            RK++K   +KK+ GCSW+ +++ V+VF  G +   + + + + L  L   M   GY+  
Sbjct: 801 IRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYIAN 860

Query: 848 TKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISK 906
            +F L D++ + K D++  HSE++A+AF +L      P+++MKNLRVC DCH+  K+ISK
Sbjct: 861 LQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISK 920

Query: 907 IVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           I  RE+++RD+NRFH F DG CSCGDYW
Sbjct: 921 IXQRELLVRDANRFHVFKDGACSCGDYW 948



 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 192/675 (28%), Positives = 314/675 (46%), Gaps = 59/675 (8%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD-EMPDRNSVSWACIVSGYTHKG 65
            H  I+  G  + V     LI  Y    D  S+  +F    P  N   W  I+   TH G
Sbjct: 94  LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNG 153

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
           + +EA  ++ E  R     + Y   SV+ AC   G   F+    +H  VL      D  +
Sbjct: 154 LFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLLDFEMAKSIHDRVLXMGFGSDLYI 211

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
            N LI MY       D AR++FEE+  RD++SWNS+IS Y+  G      +++ R +  G
Sbjct: 212 GNALIDMYCR-FNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLG 270

Query: 186 FRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
               + P+ YT  S++ A     SV  G      I  +++K G+  D+ V + L+S + +
Sbjct: 271 ----VVPDSYTMSSVLRACGGLGSVEEGDI----IHGLIEKIGIKKDVIVNNGLLSMYCK 322

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------------------------- 274
                  R+IF++M+ ++ VS N ++ G  +                             
Sbjct: 323 FNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSIL 382

Query: 275 -----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      GK VH Y+I SG        N L+NMYAKCG +  S+ VF  M  KDSV
Sbjct: 383 QACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSV 442

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SWN+MI+   QNG ++EA+  F  M+ D +   + + +  LS    LG + LG+++H + 
Sbjct: 443 SWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLXLGKELHCDL 501

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
            K+G +S++ VSN L+ +YA  G +   LKVF  M   D ++WN++I +   SE   +  
Sbjct: 502 AKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSED-CNLG 560

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           ++    MR  G +P+  T ++IL   S  +  + G ++H  + K  + ++  + N L+  
Sbjct: 561 LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEM 620

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           Y KCG + +  ++F  M + +D V+W ++IS         KA+     M   G   DH  
Sbjct: 621 YSKCGSLRNSFQVFKLM-KTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVA 679

Query: 564 FATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           F  ++ AC+    +E G+   H       +E  +   + +VD+ S+   +D A  F   M
Sbjct: 680 FVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSM 739

Query: 623 PVRNVYS-WNSMISG 636
           P++   S W +++S 
Sbjct: 740 PLKPDSSIWGALLSA 754



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 168/570 (29%), Positives = 275/570 (48%), Gaps = 46/570 (8%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H ++L  GF  D+++ N LI++Y R  DL  A K+F+EMP R+ VSW  ++SGY  
Sbjct: 193 AKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNA 252

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G  NEA +++      G + + Y + SVLRAC   G    + G  +H L+ K     D 
Sbjct: 253 NGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACG--GLGSVEEGDIIHGLIEKIGIKKDV 310

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-- 181
           +V+N L++MY       D  RRIF+++  RD +SWN++I  YSQ G      KLF  M  
Sbjct: 311 IVNNGLLSMYCKFNGLID-GRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN 369

Query: 182 -------------QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL 228
                        Q  G    L+  +Y    +IT+ Y    + S +L  + A        
Sbjct: 370 QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLAS 429

Query: 229 SDLYVG---------SALVSGFARLGNFYYARKIFEQMIQKNV----------VSMNGLM 269
            +++ G         +++++ + + G+F  A K+F +M++ +V          +SM+  +
Sbjct: 430 QEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQL 488

Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
                GKE+H  L + G    + V N LV+MYAKCG + DS  VF  M  +D ++WNT+I
Sbjct: 489 GDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTII 548

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
           +    +      +     MR +G+     +++S L  C+ L     G++IHG   KLGL+
Sbjct: 549 ASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLE 608

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI---GAFADSEALVSEAVKY 446
           SDV V N L+ +Y+  G L    +VF LM   D V+W ++I   G + + +    +AV+ 
Sbjct: 609 SDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGK----KAVRA 664

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYG 505
           + +M  AG  P+ V F+ I+ A S   + + G +  H     Y +         ++    
Sbjct: 665 FGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLS 724

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           +   +D  E     M  + D   W +++S 
Sbjct: 725 RSALLDKAEDFILSMPLKPDSSIWGALLSA 754



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 225/474 (47%), Gaps = 54/474 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++  + H  I K G   DV + N L+++Y +   L    ++FD+M  R++VSW  ++ GY
Sbjct: 292 EEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGY 351

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G+  E+ K+F EMV   F  +   + S+L+AC   G    +FG  VH  ++ S    
Sbjct: 352 SQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGD--LEFGKYVHDYMITSGYEC 408

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D   SN+LI MY  C  +   ++ +F  ++ +D +SWNS+I+VY Q G      KLF  M
Sbjct: 409 DTTASNILINMYAKC-GNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMM 467

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           + +     +KP+  T+  L++   S+ L    L +++   + K G  S++ V + LV  +
Sbjct: 468 KTD-----VKPDSVTYVMLLSM--STQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMY 520

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMN----------------------------------- 266
           A+ G    + K+FE M  +++++ N                                   
Sbjct: 521 AKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATML 580

Query: 267 ------GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                  L+  +R+GKE+HG + + GL   V VGN L+ MY+KCG++ +S  VF+ M  K
Sbjct: 581 SILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK 640

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQI 379
           D V+W  +IS     G  ++A+  F  M   G++  + + ++ + +C+  G +  G    
Sbjct: 641 DVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYF 700

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           H       ++  +     ++ L + +  L +       MP + D   W +++ A
Sbjct: 701 HRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSA 754


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  530 bits (1365), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 275/663 (41%), Positives = 405/663 (61%), Gaps = 4/663 (0%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R+GK++H  LI +G      + N LVNMY+KCG +D +  +F  M  ++ VSW  MISGL
Sbjct: 22  RRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGL 81

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            QN  + EAI  FC MR  G + + F+  S + +CASLG I +G+Q+H   LK G+ S++
Sbjct: 82  SQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSEL 141

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V + L  +Y+  G +    KVF  MP  D+VSW ++I  ++       EA+  +  M  
Sbjct: 142 FVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEF-EEALLAFKKMID 200

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
              + +     + L A  +    K G  VH+ V+K    ++  + NAL   Y K G+M+ 
Sbjct: 201 EEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMES 260

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
              +F   SE R+ VS+  +I GY+  E + K +++   + ++G   + FTF++++ ACA
Sbjct: 261 ASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACA 320

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
           + A LE+G ++HA  ++   + D  + S LVDMY KCG ++ A + FD +      +WNS
Sbjct: 321 NQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNS 380

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           ++S + +HG G  A+ +F +M   G  P+ +TF+ +L+ CSHAGLV+EG  +F SM + Y
Sbjct: 381 LVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTY 440

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
           G++P  E +SC++DLLGRAG L + +EFIN+MP  PN+  W + LGA CR +  K E+G+
Sbjct: 441 GVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGA-CRIHGDK-EMGK 498

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
            AA  L ++EP+N+   VLL+N+YA+  +WEDV   R  M++  VKK  G SWV +    
Sbjct: 499 LAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKT 558

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
           HVF A D SHP K  IYEKL  L  +++ AGYVP+T     D++   KE L+  HSE+IA
Sbjct: 559 HVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIA 618

Query: 873 VAFVL-TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
           VAF L +     PI + KNLRVC DCHSA KFISK+ GR+I++RD++RFHHF DG CSCG
Sbjct: 619 VAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCG 678

Query: 932 DYW 934
           DYW
Sbjct: 679 DYW 681



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 195/387 (50%), Gaps = 7/387 (1%)

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
           ++    +L   + + A    +  G+Q+H   +  G      ++N L+++Y+  G L   L
Sbjct: 1   MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60

Query: 413 KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
           K+F  MP+ + VSW ++I   + +    SEA++ +  MR  G  P    F + + A +S 
Sbjct: 61  KLFDTMPQRNLVSWTAMISGLSQNSKF-SEAIRTFCGMRICGEVPTQFAFSSAIRACASL 119

Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
              ++G Q+H   +K+ + +E  + + L   Y KCG M D  K+F  M   +DEVSW +M
Sbjct: 120 GSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP-CKDEVSWTAM 178

Query: 533 ISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL 592
           I GY       +A+     M+     +D     + L AC ++   + G  VH+  V+   
Sbjct: 179 IDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGF 238

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDL-MPVRNVYSWNSMISGYARHGHGDKALTLFS 651
           E D+ +G+AL DMYSK G ++ AS  F +    RNV S+  +I GY      +K L++F 
Sbjct: 239 ESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFV 298

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGR 710
           +++  G  P+  TF  ++ AC++   +++G + H + M   +   P +   S +VD+ G+
Sbjct: 299 ELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGK 356

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVL 737
            G L++  +  +++   P  + W +++
Sbjct: 357 CGLLEQAIQAFDEIG-DPTEIAWNSLV 382



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 211/475 (44%), Gaps = 53/475 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++  G+    FL N L+N+Y + G+L  A KLFD MP RN VSW  ++SG 
Sbjct: 22  RRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGL 81

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +     +EA + F  M   G +  ++A  S +RAC   G    + G Q+HCL LK     
Sbjct: 82  SQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG--SIEMGKQMHCLALKFGIGS 139

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V + L  MY  C    D A ++FEE+  +D +SW ++I  YS+ G+       F +M
Sbjct: 140 ELFVGSNLEDMYSKCGAMFD-ACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKM 198

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             E     +  +++   S + A     L      + + + V K G  SD++VG+AL   +
Sbjct: 199 IDE----EVTIDQHVLCSTLGAC--GALKACKFGRSVHSSVVKLGFESDIFVGNALTDMY 252

Query: 242 ARLGNFYYARKIFEQMIQ-KNVVSMNGLMEG-----------------RRKGKE------ 277
           ++ G+   A  +F    + +NVVS   L++G                 RR+G E      
Sbjct: 253 SKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTF 312

Query: 278 ------------------VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                             +H  +++    +   V + LV+MY KCG ++ +   F  +  
Sbjct: 313 SSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGD 372

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQ 378
              ++WN+++S   Q+G  ++AI  F  M   G+  +  + IS L+ C+  G +  G   
Sbjct: 373 PTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDY 432

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            +      G+       + ++ L   AG L    +    MP E +   W S +GA
Sbjct: 433 FYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGA 487



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 148/315 (46%), Gaps = 19/315 (6%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD-EMPDRNSVSWACIVSGYTHKGM 66
           H  ++K GF  D+F+ N L ++Y + GD+ SAS +F  +   RN VS+ C++ GY     
Sbjct: 230 HSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQ 289

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             +   +F E+ R G   N +   S+++AC     +  + G Q+H  V+K N   D  VS
Sbjct: 290 IEKGLSVFVELRRQGIEPNEFTFSSLIKACA--NQAALEQGTQLHAQVMKINFDEDPFVS 347

Query: 127 NVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           ++L+ MYG C  LE    A + F+EI     I+WNS++SV+ Q G      K+F RM   
Sbjct: 348 SILVDMYGKCGLLEQ---AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDR 404

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G    +KPN  TF SL+T    + L     L    +M K  G++      S ++    R 
Sbjct: 405 G----VKPNAITFISLLTGCSHAGLVEEG-LDYFYSMDKTYGVVPGEEHYSCVIDLLGRA 459

Query: 245 GNFYYARKIFEQM-IQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG----LV 298
           G    A++   +M  + N       +   R  G +  G L    L  +    +G    L 
Sbjct: 460 GRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLS 519

Query: 299 NMYAKCGTIDDSRSV 313
           N+YA     +D RSV
Sbjct: 520 NIYANERQWEDVRSV 534


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 278/710 (39%), Positives = 416/710 (58%), Gaps = 15/710 (2%)

Query: 236 ALVSGFARLGNFYYARKIFEQM----------IQKNVVSMNGLMEGRRKGKEVHGYLIRS 285
            L+ G+A+   F  A ++F ++          +   V+ +   ME    G+ VHG +++ 
Sbjct: 16  TLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAELGRIVHGCVLKV 75

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
           G      +G  L++ Y+  G +  +R VF  +  KD VSW  MI+   +N C+ EA+  F
Sbjct: 76  GYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFF 135

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             MR  G   +NF+    L +C  L     G+ +H   LK   + D+ V   LL LY   
Sbjct: 136 SQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRC 195

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
           G      + F  MP++D + W+ +I  FA S     +A++ +  MRRA   PN  TF ++
Sbjct: 196 GDNDDAWRAFGDMPKNDVIPWSFMISRFAQS-GQSEKALEIFCQMRRAFVIPNQFTFSSV 254

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           L A++      L   +H   +K  ++ +  + NAL++CY KCG ++   ++F  +S+R D
Sbjct: 255 LQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRND 314

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
            VSWN++I  Y+      +A++L   M++   +    T++++L ACA++A LE G++VH 
Sbjct: 315 -VSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHC 373

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
              +     DV +G+AL+DMY+KCG I  A   FD++ +R+  SWN++I GY+ HG G +
Sbjct: 374 LTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVE 433

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
           A+ +F+ MK     PD +TFVGVLSACS+ G +DEG ++F SM Q YG+ P +E ++CMV
Sbjct: 434 AIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMV 493

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN 765
            L+GR+G LD+  +FI  +P  P+ +IWR +LGAC   N    ELGR +A  + E+EP++
Sbjct: 494 WLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHN--DVELGRISAQRVLELEPRD 551

Query: 766 AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
             ++VLL+N+YA   +W +VA  RK MK   VKKE G SW+  +  VH F   D SH + 
Sbjct: 552 EASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADL 611

Query: 826 DLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR-NSKLP 884
            LI   L+ LN K R AGY PQ    L D+E + KE L+  HSE++A+AF L R  +  P
Sbjct: 612 KLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLALAFGLVRMPAGCP 671

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           IRI+KNLR+C DCHS  K ISKIVGR+I++RD NRFHHF +G CSC DYW
Sbjct: 672 IRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCADYW 721



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 217/426 (50%), Gaps = 6/426 (1%)

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           VF  M  +++VS+ T+I G  Q+  + EA   F  +  +G   + F   + L    S+ W
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
             LG+ +HG  LK+G  S+  +  AL+  Y+ +G +S   +VF  +   D VSW  +I +
Sbjct: 62  AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN 492
           +A+++   SEA++++  MR AG+ PN  TF  +L A         G  VH  V+K N   
Sbjct: 122 YAENDCF-SEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
           +  +   LL  Y +CG+ DD  + F  M  + D + W+ MIS +  +    KA+ +   M
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMP-KNDVIPWSFMISRFAQSGQSEKALEIFCQM 239

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRI 612
            +     + FTF++VL A A + +L+    +H   ++A L  DV + +AL+  Y+KCG I
Sbjct: 240 RRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCI 299

Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
           + +   F+ +  RN  SWN++I  Y + G G++AL+LFS M         VT+  +L AC
Sbjct: 300 EQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRAC 359

Query: 673 SHAGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
           +    ++ G + H  +   +YG    +   + ++D+  + G + K   F+  M    + +
Sbjct: 360 ATLAALELGLQVHCLTAKTIYG--QDVAVGNALIDMYAKCGSI-KDARFMFDMLDLRDKV 416

Query: 732 IWRTVL 737
            W  ++
Sbjct: 417 SWNAII 422



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 150/544 (27%), Positives = 249/544 (45%), Gaps = 55/544 (10%)

Query: 42  LFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGP 101
           +FDEMP+RN+VS+  ++ GY       EA ++F  +   G  LN +   +VL+       
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLL--VSM 59

Query: 102 SGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSI 161
              + G  VH  VLK     +  +   LI  Y S       AR +F+EI ++D++SW  +
Sbjct: 60  EWAELGRIVHGCVLKVGYGSNTFIGTALIDAY-SVSGCVSMAREVFDEISSKDMVSWTGM 118

Query: 162 ISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAM 221
           I+ Y++        + FS+M+  GF    KPN +TF  ++ A     L      + +   
Sbjct: 119 IASYAENDCFSEALEFFSQMRVAGF----KPNNFTFAGVLKACLG--LQNFDAGKTVHCS 172

Query: 222 VKKAGLLSDLYVG-------------------------------SALVSGFARLGNFYYA 250
           V K     DLYVG                               S ++S FA+ G    A
Sbjct: 173 VLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKA 232

Query: 251 RKIFEQMIQ----------KNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
            +IF QM +           +V+  +  +E     K +HG+ +++GL   V V N L+  
Sbjct: 233 LEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMAC 292

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           YAKCG I+ S  +F  +  ++ VSWNT+I    Q G  E A+  F  M R  + ++  + 
Sbjct: 293 YAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTY 352

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
            S L +CA+L  + LG Q+H    K     DV+V NAL+ +YA  G +     +F ++  
Sbjct: 353 SSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDL 412

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            D+VSWN++I  ++    L  EA+K +  M+     P+ +TF+ +L+A S+      G Q
Sbjct: 413 RDKVSWNAIICGYS-MHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQ 471

Query: 481 VHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YI 537
                +K +   E  +E+   ++   G+ G +D   K    +      + W +++    I
Sbjct: 472 YFTS-MKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVI 530

Query: 538 HNEL 541
           HN++
Sbjct: 531 HNDV 534



 Score =  187 bits (474), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 133/471 (28%), Positives = 230/471 (48%), Gaps = 52/471 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           ++ H  +LK G+  + F+   LI+ Y   G ++ A ++FDE+  ++ VSW  +++ Y   
Sbjct: 66  RIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAEN 125

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
              +EA + F +M  AGF  N +    VL+AC   G   F  G  VHC VLK+N   D  
Sbjct: 126 DCFSEALEFFSQMRVAGFKPNNFTFAGVLKAC--LGLQNFDAGKTVHCSVLKTNYERDLY 183

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V   L+ +Y  C ++ D A R F ++   D+I W+ +IS ++Q G +    ++F +M+R 
Sbjct: 184 VGVGLLELYTRCGDNDD-AWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRA 242

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                + PN++TF S++ A  S+ +    L + I     KAGL +D++V +AL++ +A+ 
Sbjct: 243 ----FVIPNQFTFSSVLQA--SADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKC 296

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLM-------EGRRK----------------------- 274
           G    + ++FE +  +N VS N ++       +G R                        
Sbjct: 297 GCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSIL 356

Query: 275 -----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      G +VH    ++     VAVGN L++MYAKCG+I D+R +F  +  +D V
Sbjct: 357 RACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKV 416

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SWN +I G   +G   EAI  F  M+         + +  LS+C++ G +  G+Q     
Sbjct: 417 SWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSM 476

Query: 384 LK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            +  G++  +     ++ L   +G L + +K    +P E   + W +++GA
Sbjct: 477 KQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGA 527



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 102/200 (51%), Gaps = 7/200 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           +K  H   LK G + DVF+ N L+  Y + G +  + +LF+ + DRN VSW  I+  Y  
Sbjct: 267 SKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQ 326

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G    A  +F  M+R           S+LRAC     +  + G+QVHCL  K+    D 
Sbjct: 327 LGDGERALSLFSNMLRYQVQATEVTYSSILRACATL--AALELGLQVHCLTAKTIYGQDV 384

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V N LI MY  C    D AR +F+ ++ RD +SWN+II  YS  G  +   K+F+ M+ 
Sbjct: 385 AVGNALIDMYAKCGSIKD-ARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKE 443

Query: 184 EGFRYSLKPNEYTFGSLITA 203
                  KP+E TF  +++A
Sbjct: 444 T----KCKPDELTFVGVLSA 459


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 273/658 (41%), Positives = 401/658 (60%), Gaps = 5/658 (0%)

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +H  + + G      VG  L++ YA CG+++ +R  F  +  KD VSW  M++   +N  
Sbjct: 63  LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDR 122

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
           +++++  F  MR  G   ++F+    L +C  L    +G+ +HG  LK   + D+ V   
Sbjct: 123 FQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVG 182

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           LL LY   G  +  L+VF  MP+HD + W+ +I  +A S     EAV+ +  MRRA   P
Sbjct: 183 LLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQ-SREAVELFGQMRRAFVLP 241

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           N  TF ++L + +S    +LG QVH  V+K  +     + NAL+  Y KCG +D+  K+F
Sbjct: 242 NQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLF 301

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
             +  R +EV+WN+MI GY+ +    KA++L   M++   +    T+++VL ACAS+A +
Sbjct: 302 MELPNR-NEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAM 360

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
           E G ++H+  ++   + DVV+G+AL+DMY+KCG I  A   FD++  R+  SWN+MISGY
Sbjct: 361 ELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGY 420

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
           + HG   +AL  F  M+    +P+ +TFV +LSACS+AGL+D G  +FKSM Q YG+ P 
Sbjct: 421 SMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPC 480

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
           +E ++CMV LLGR+G LDK  + I ++P+ PN  +WR +LGAC   N    +LG  +A  
Sbjct: 481 MEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHN--DVDLGIMSAQQ 538

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           + +++PQ+   +VLL+N+YA   +W  VA  RK MK   VKKE G SW+  +  VH F  
Sbjct: 539 ILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSV 598

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL 877
           GD SHP+  +I   L+ LN K   AGYVP     L D+E + K+  +  HSE++A+AF L
Sbjct: 599 GDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGL 658

Query: 878 TRN-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            R  S+  IRI+KNLR+C DCHSA K ISKIV R+I++RD NRFHHF DG CSCGDYW
Sbjct: 659 IRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 162/561 (28%), Positives = 273/561 (48%), Gaps = 60/561 (10%)

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGS 212
           R+ +S+ ++I  Y Q      V  LFSR+ REG  + L P  + F +++    S  +  +
Sbjct: 4   RNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREG--HELNP--FVFTTILKLLVS--VECA 57

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL---- 268
            L   + A + K G  S+ +VG+AL+  +A  G+   AR+ F+ +  K++VS  G+    
Sbjct: 58  ELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACY 117

Query: 269 -------------------------------------MEGRRKGKEVHGYLIRSGLFDMV 291
                                                +E    GK VHG ++++     +
Sbjct: 118 AENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDL 177

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
            VG GL+++Y K G  +D   VF  M   D + W+ MIS   Q+    EA+  F  MRR 
Sbjct: 178 YVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRA 237

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
            ++ + F+  S L SCAS+  + LG+Q+H   LK+GLD +V VSNAL+ +YA  G L   
Sbjct: 238 FVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNS 297

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
           +K+F  +P  ++V+WN++I  +  S     +A+  Y +M       + VT+ ++L A +S
Sbjct: 298 MKLFMELPNRNEVTWNTMIVGYVQS-GDGDKALSLYKNMLECQVQASEVTYSSVLRACAS 356

Query: 472 FSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
            +  +LG Q+H+  +K     +  + NAL+  Y KCG + +   +F  +SE RDE+SWN+
Sbjct: 357 LAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSE-RDEISWNA 415

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-----VHAC 586
           MISGY  + L+ +A+     M +     +  TF ++LSAC++   L+ G       V   
Sbjct: 416 MISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDY 475

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDK 645
           G+  C+E      + +V +  + G +D A +  + +P+  NV  W +++     H   D 
Sbjct: 476 GIEPCMEH----YTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDL 531

Query: 646 ALTLFSQMKLDGPLPDHVTFV 666
            +    Q+    P  D  T V
Sbjct: 532 GIMSAQQILQIDP-QDEATHV 551



 Score =  215 bits (548), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 144/541 (26%), Positives = 255/541 (47%), Gaps = 57/541 (10%)

Query: 46  MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLR--ACQECGPSG 103
           MPDRN+VS+  ++ GY      +E   +F  + R G  LN +   ++L+     EC    
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECA--- 57

Query: 104 FKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS 163
            +    +H  + K     +  V   LI  Y  C  S + AR+ F+ I  +D++SW  +++
Sbjct: 58  -ELAYSLHACIYKLGHESNAFVGTALIDAYAVC-GSVNSARQAFDAIACKDMVSWTGMVA 115

Query: 164 VYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVK 223
            Y++        +LF+ M+  GF     PN +TF  ++ A     L    + + +   V 
Sbjct: 116 CYAENDRFQDSLQLFAEMRMVGF----NPNHFTFAGVLKACIG--LEAFSVGKSVHGCVL 169

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL--------------- 268
           K     DLYVG  L+  + + G+     ++FE+M + +V+  + +               
Sbjct: 170 KTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVE 229

Query: 269 --------------------------MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
                                     +E  + GK+VH ++++ GL   V V N L+++YA
Sbjct: 230 LFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYA 289

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIS 362
           KCG +D+S  +F  +  ++ V+WNTMI G  Q+G  ++A+  +  M    + +S  +  S
Sbjct: 290 KCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSS 349

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
            L +CASL  + LG QIH   LK   D DV V NAL+ +YA  G +     VF ++ E D
Sbjct: 350 VLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERD 409

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
           ++SWN++I  ++    LV EA+K +  M+     PN +TF++IL+A S+  +  +G    
Sbjct: 410 EISWNAMISGYS-MHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYF 468

Query: 483 AQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNE 540
             +++ Y +         ++   G+ G +D   K+   +    +   W +++    IHN+
Sbjct: 469 KSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHND 528

Query: 541 L 541
           +
Sbjct: 529 V 529



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 223/469 (47%), Gaps = 52/469 (11%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  I K G   + F+   LI+ Y   G + SA + FD +  ++ VSW  +V+ Y     
Sbjct: 63  LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDR 122

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             ++ ++F EM   GF  N +    VL+AC   G   F  G  VH  VLK+    D  V 
Sbjct: 123 FQDSLQLFAEMRMVGFNPNHFTFAGVLKAC--IGLEAFSVGKSVHGCVLKTCYEMDLYVG 180

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
             L+ +Y    ++ D   R+FEE+   D+I W+ +IS Y+Q   +    +LF +M+R   
Sbjct: 181 VGLLDLYTKFGDAND-VLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRA-- 237

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              + PN++TF S++ +  S  +    L +Q+   V K GL  +++V +AL+  +A+ G 
Sbjct: 238 --FVLPNQFTFASVLQSCAS--IENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGR 293

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------------- 274
              + K+F ++  +N V+ N ++ G  +                                
Sbjct: 294 LDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRA 353

Query: 275 ---------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    G ++H   +++     V VGN L++MYAKCG+I ++R VF  +  +D +SW
Sbjct: 354 CASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISW 413

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N MISG   +G   EA+  F  M+    + +  + +S LS+C++ G + +GQ      ++
Sbjct: 414 NAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQ 473

Query: 386 -LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
             G++  +     ++ L   +G+L + +K+   +P    V  W +++GA
Sbjct: 474 DYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGA 522



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 13/208 (6%)

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
           R+ VS+ ++I GY+ +  L + ++L   + + G  L+ F F T+L    SV   E    +
Sbjct: 4   RNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSL 63

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           HAC  +   E +  +G+AL+D Y+ CG ++ A + FD +  +++ SW  M++ YA +   
Sbjct: 64  HACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRF 123

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ------ 697
             +L LF++M++ G  P+H TF GVL AC        G + F     V+G + +      
Sbjct: 124 QDSLQLFAEMRMVGFNPNHFTFAGVLKACI-------GLEAFSVGKSVHGCVLKTCYEMD 176

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMP 725
           L     ++DL  + G+ + +     +MP
Sbjct: 177 LYVGVGLLDLYTKFGDANDVLRVFEEMP 204


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 316/936 (33%), Positives = 500/936 (53%), Gaps = 60/936 (6%)

Query: 46  MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG-PSGF 104
           MP R S SW   VSG    G+ + A  + + M      L+ +AL S++ AC+  G   G 
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 105 KFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISV 164
             G  +H L  ++    +  +   L+ +YGS     + A+R+F E+  R+++SW +I+  
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLN-AQRLFWEMPQRNVVSWTAIMVA 119

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMV 222
            S  G        + RM++EG    +  N     ++++   A    ++G     Q+ A V
Sbjct: 120 LSSNGCMEEALVAYRRMRKEG----VMCNANALATVVSLCGALEDEVAG----LQVTAHV 171

Query: 223 KKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM------------- 269
             +GLL+ + V ++L++ F  L     A ++F++M +++ +S N ++             
Sbjct: 172 VVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCF 231

Query: 270 -------EGRRK---------------------GKEVHGYLIRSGLFDMVAVGNGLVNMY 301
                   G  K                     G  +H   + SGL   V + N LVNMY
Sbjct: 232 IVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMY 291

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ-NGCYEEAIMNFCAMRRDGLMSSNFSL 360
           +  G +D++ S+FR M  +D +SWNTMIS   Q N C E        ++ D    ++ + 
Sbjct: 292 STAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTF 351

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
            S L +C+S   +M G+ IH   L+  L + + + N+LL++Y+    +    +VF  MP 
Sbjct: 352 SSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPC 411

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF-SMGKLGH 479
           +D VS N + G +A  E  V+ A++ +  MR  G  PN +T IN+     S   +   G 
Sbjct: 412 YDVVSCNVLTGGYAALED-VANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGM 470

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
            +HA V +  + ++  I N+L++ Y  CG+++    IF+R++ +   +SWN++I+  + +
Sbjct: 471 PLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNK-SVISWNAIIAANVRH 529

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
               +A+ L       G +LD F  A  LS+ A++A+LE GM++H   V+  L+ D  + 
Sbjct: 530 GRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVV 589

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           +A +DMY KCG++D   +       R    WN++ISGYAR+G+  +A   F  M   G  
Sbjct: 590 NATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQK 649

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           PD+VTFV +LSACSHAGL+D+G  ++ SM+  +G+ P ++   C+VDLLGR G+  + E+
Sbjct: 650 PDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEK 709

Query: 720 FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASG 779
           FI++MP+ PN LIWR++L +      +  ++GRKAA  L E++P +   YVLL+N+YA+ 
Sbjct: 710 FIDEMPVLPNDLIWRSLLSS--SRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATN 767

Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
            +W DV K R  MK  ++ K   CSW+ +K+ V  F  GD SH   + IY KL E+  K+
Sbjct: 768 ARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKL 827

Query: 840 RDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCH 898
           R+ GYV  T  AL D + E KE  +  HSEK+A+A+ +L       IRI KNLRVC DCH
Sbjct: 828 REVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCH 887

Query: 899 SAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             FK +S +  REIVLRD  RFH F  G CSC D+W
Sbjct: 888 LVFKLVSMVFHREIVLRDPYRFHQFKHGSCSCSDFW 923



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 187/691 (27%), Positives = 322/691 (46%), Gaps = 72/691 (10%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H    + G   +V++   L+++Y   G + +A +LF EMP RN VSW  I+   +  G 
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGC 125

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA   ++ M + G + N  AL +V+  C          G+QV   V+ S       V+
Sbjct: 126 MEEALVAYRRMRKEGVMCNANALATVVSLCGALEDE--VAGLQVTAHVVVSGLLTHVSVA 183

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI M+G+     D A R+F+ +E RD ISWN++IS+YS        F + S M R G 
Sbjct: 184 NSLITMFGNLRRVQD-AERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDM-RHG- 240

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              +KP+  T  SL++   SS L    L   I ++   +GL   + + +ALV+ ++  G 
Sbjct: 241 --EVKPDVTTLCSLVSVCASSDLVA--LGSGIHSLCVSSGLHCSVPLINALVNMYSTAGK 296

Query: 247 FYYARKIFEQMIQKNVVSMNGLM------------------------------------- 269
              A  +F  M +++V+S N ++                                     
Sbjct: 297 LDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALG 356

Query: 270 -----EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                E    G+ +H  +++  L +++ +GN L+ MY+KC +++D+  VF  M   D VS
Sbjct: 357 ACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVS 416

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM-LGQQIHGEG 383
            N +  G         A+  F  MR  G+  +  ++I+   +C SLG +   G  +H   
Sbjct: 417 CNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYV 476

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
            + GL SD  ++N+L+++YA  G L     +F  +     +SWN++I A         EA
Sbjct: 477 TQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANV-RHGRGEEA 535

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           +K ++D + AG   +       L+++++ +  + G Q+H   +K  +  ++ + NA +  
Sbjct: 536 IKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDM 595

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           YGKCG+MD   K     + R  +  WN++ISGY       +A +    M+  GQ+ D+ T
Sbjct: 596 YGKCGKMDCMLKTLPDPAHRPTQC-WNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVT 654

Query: 564 FATVLSACASVATLERGMEVH---------ACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
           F  +LSAC+    +++GM+ +         + G++ C+         +VD+  + G+   
Sbjct: 655 FVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCV--------CIVDLLGRLGKFAE 706

Query: 615 ASRFFDLMPV-RNVYSWNSMISGYARHGHGD 644
           A +F D MPV  N   W S++S    H + D
Sbjct: 707 AEKFIDEMPVLPNDLIWRSLLSSSRTHKNLD 737



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 118/283 (41%), Gaps = 31/283 (10%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H  IL+      + + N+L+ +Y +   +    ++F+ MP  + VS   +  GY 
Sbjct: 366 NGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYA 425

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                  A ++F  M   G   N   + ++   C+  G     +GM +H  V ++    D
Sbjct: 426 ALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLG-DLHSYGMPLHAYVTQTGLLSD 484

Query: 123 GLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
             ++N LI MY +C  LES+     IF  I  + +ISWN+II+   + G      KLF  
Sbjct: 485 EYITNSLITMYATCGDLESST---GIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMD 541

Query: 181 MQREGF---RYSLKPNEYTFGSLITAAYSSVLSG----------SYLLQQILAMVKKAG- 226
            Q  G    R+ L     +  +L +      L G          S+++   + M  K G 
Sbjct: 542 SQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGK 601

Query: 227 ---LLSDL--------YVGSALVSGFARLGNFYYARKIFEQMI 258
              +L  L           + L+SG+AR G F  A   F+ M+
Sbjct: 602 MDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMV 644


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 267/663 (40%), Positives = 411/663 (61%), Gaps = 6/663 (0%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +G+EVH  +++SG+     + N L++MYAKCG++ D+R VF  +  ++ VSW  MI    
Sbjct: 65  QGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFV 124

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
                 EA   +  M+  G      + +S L++  +   + LGQ++H E ++ GL+ +  
Sbjct: 125 AGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPR 184

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V  +L+ +YA  G +S+   +F  +PE + V+W  +I  +A  +  V  A++    M++A
Sbjct: 185 VGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYA-QQGQVDVALELLETMQQA 243

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
             +PN +TF +IL   ++ +  + G +VH  +I+     E  + N+L++ Y KCG +++ 
Sbjct: 244 EVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEA 303

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            K+F+ +  R D V+W +M++GY       +A+NL   M Q+G + D  TF +VL++C+S
Sbjct: 304 RKLFSDLPHR-DVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSS 362

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
            A L+ G  +H   V A    DV + SALV MY+KCG +D AS  F+ M  RNV +W ++
Sbjct: 363 PAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAI 422

Query: 634 ISGY-ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           I+G  A+HG   +AL  F QMK  G  PD VTF  VLSAC+H GLV+EG KHF+SM   Y
Sbjct: 423 ITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDY 482

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
           G+ P +E +SC VDLLGRAG L++ E  I  MP  P   +W  +L A CR +    E G 
Sbjct: 483 GIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSA-CRVHS-DVERGE 540

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
           +AA  + +++P +   YV L+++YA+ G++ED  K R+ M++ +V KE G SW+ +   V
Sbjct: 541 RAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKV 600

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
           HVF   D+SHPE + IY +L +L +++++ GYVP T+F L D++ E KE ++  HSE++A
Sbjct: 601 HVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKERILFSHSERLA 660

Query: 873 VAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
           + + L +    +PIRI+KNLRVCGDCH+A KFISK+VGREI+ RD+ RFHHF DG CSCG
Sbjct: 661 ITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVVGREIIARDAQRFHHFADGVCSCG 720

Query: 932 DYW 934
           D+W
Sbjct: 721 DFW 723



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 252/527 (47%), Gaps = 52/527 (9%)

Query: 58  VSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
           VS     G   EA  +   M+  G  +       +L+ C        + G +VH  +LKS
Sbjct: 19  VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARL--RSLEQGREVHAAILKS 76

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
               +  + N L++MY  C   TD ARR+F+ I  R+++SW ++I  +      +  FK 
Sbjct: 77  GIQPNRYLENTLLSMYAKCGSLTD-ARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKC 135

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           +  M+  G     KP++ TF SL+ A  +  L    L Q++   + +AGL  +  VG++L
Sbjct: 136 YETMKLAG----CKPDKVTFVSLLNAFTNPELL--QLGQKVHMEIVEAGLELEPRVGTSL 189

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------------------- 274
           V  +A+ G+   AR IF+++ +KNVV+   L+ G  +                       
Sbjct: 190 VGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNK 249

Query: 275 ------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                             GK+VH Y+I+SG    + V N L+ MY KCG ++++R +F  
Sbjct: 250 ITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSD 309

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           +  +D V+W  M++G  Q G ++EAI  F  M++ G+     +  S L+SC+S  ++  G
Sbjct: 310 LPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEG 369

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           ++IH + +  G + DV + +AL+S+YA  G +     VF  M E + V+W ++I      
Sbjct: 370 KRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQ 429

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETT 495
                EA++Y+  M++ G  P+ VTF ++L+A +   + + G +   +  + Y +     
Sbjct: 430 HGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVE 489

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
             +  +   G+ G +++ E +   M        W +++S   +H+++
Sbjct: 490 HYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDV 536



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 145/581 (24%), Positives = 257/581 (44%), Gaps = 99/581 (17%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ILK G   + +L NTL+++Y + G L  A ++FD + DRN VSW  ++  +     +
Sbjct: 70  HAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKN 129

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA K ++ M  AG   ++    S+L A     P   + G +VH  ++++    +  V  
Sbjct: 130 LEAFKCYETMKLAGCKPDKVTFVSLLNAF--TNPELLQLGQKVHMEIVEAGLELEPRVGT 187

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY  C + +  AR IF+ +  +++++W  +I+ Y+Q+G      +L   MQ+    
Sbjct: 188 SLVGMYAKCGDISK-ARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQA--- 243

Query: 188 YSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
             + PN+ TF S++    +  ++  G  + + I+    ++G   +L+V ++L++ + + G
Sbjct: 244 -EVAPNKITFASILQGCTTPAALEHGKKVHRYII----QSGYGRELWVVNSLITMYCKCG 298

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEG--------------RR------------------ 273
               ARK+F  +  ++VV+   ++ G              RR                  
Sbjct: 299 GLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLT 358

Query: 274 ---------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                    +GK +H  L+ +G    V + + LV+MYAKCG++DD+  VF  M  ++ V+
Sbjct: 359 SCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVA 418

Query: 325 WNTMISG-LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IHGE 382
           W  +I+G   Q+G   EA+  F  M++ G+     +  S LS+C  +G +  G++     
Sbjct: 419 WTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSM 478

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            L  G+   V   +  + L   AG+L     V   MP    +   SV GA          
Sbjct: 479 YLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMP---FIPGPSVWGALLS------- 528

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           A + + D+ R                         G +    V+K +  ++     AL S
Sbjct: 529 ACRVHSDVER-------------------------GERAAENVLKLD-PDDDGAYVALSS 562

Query: 503 CYGKCGEMDDCEKIFARMSERRDEV-----SWNSMISGYIH 538
            Y   G  +D EK+   M E+RD V     SW   + G +H
Sbjct: 563 IYAAAGRYEDAEKVRQVM-EKRDVVKEPGQSWIE-VDGKVH 601



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 229/482 (47%), Gaps = 48/482 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H++I++ G   +  +  +L+ +Y + GD++ A  +FD +P++N V+W  +++GY  +G  
Sbjct: 171 HMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQV 230

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           + A ++ + M +A    N+    S+L+ C    P+  + G +VH  +++S    +  V N
Sbjct: 231 DVALELLETMQQAEVAPNKITFASILQGCTT--PAALEHGKKVHRYIIQSGYGRELWVVN 288

Query: 128 VLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
            LI MY  C  LE    AR++F ++  RD+++W ++++ Y+Q G       LF RMQ++G
Sbjct: 289 SLITMYCKCGGLEE---ARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQG 345

Query: 186 FRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
               +KP++ TF S++T+  S      G  + QQ++     AG   D+Y+ SALVS +A+
Sbjct: 346 ----IKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLV----HAGYNLDVYLQSALVSMYAK 397

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG-------RRKGKEVHGYLIRSGLFDMVAVGNG 296
            G+   A  +F QM ++NVV+   ++ G        R+  E    + + G+         
Sbjct: 398 CGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTS 457

Query: 297 LVNMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           +++     G +++ R  FR M     I      ++  +  L + G  EEA     +M   
Sbjct: 458 VLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSM--- 514

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
             +       + LS+C     +  G++     LKL  D D     AL S+YA AG     
Sbjct: 515 PFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDD-GAYVALSSIYAAAGRYEDA 573

Query: 412 LKVFFLMPEHDQV-----SWNSVIG----------AFADSEALVSEAVKYYLDMRRAGWS 456
            KV  +M + D V     SW  V G          +  +SE +  E  K    ++  G+ 
Sbjct: 574 EKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYV 633

Query: 457 PN 458
           P+
Sbjct: 634 PD 635



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 113/201 (56%), Gaps = 8/201 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  I++ G+  ++++ N+LI +Y + G L  A KLF ++P R+ V+W  +V+GY  
Sbjct: 268 GKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQ 327

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G  +EA  +F+ M + G   ++    SVL +C    P+  + G ++H  ++ +    D 
Sbjct: 328 LGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCS--SPAFLQEGKRIHQQLVHAGYNLDV 385

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS-VYSQRGDTISVFKLFSRMQ 182
            + + L++MY  C  S D A  +F ++  R++++W +II+   +Q G      + F +M+
Sbjct: 386 YLQSALVSMYAKC-GSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMK 444

Query: 183 REGFRYSLKPNEYTFGSLITA 203
           ++G    +KP++ TF S+++A
Sbjct: 445 KQG----IKPDKVTFTSVLSA 461



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 106/199 (53%), Gaps = 4/199 (2%)

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
           L +A+ ++  M+ +G R+    F  +L  CA + +LE+G EVHA  +++ ++ +  + + 
Sbjct: 28  LKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENT 87

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+ MY+KCG +  A R FD +  RN+ SW +MI  +       +A   +  MKL G  PD
Sbjct: 88  LLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPD 147

Query: 662 HVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
            VTFV +L+A ++  L+  G K H + +     L P++   + +V +  + G++ K    
Sbjct: 148 KVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVG--TSLVGMYAKCGDISKARVI 205

Query: 721 INKMPITPNSLIWRTVLGA 739
            +++P   N + W  ++  
Sbjct: 206 FDRLP-EKNVVTWTLLIAG 223



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 1/100 (1%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG- 60
           ++ K  H Q++  G+  DV+L + L+++Y + G +  AS +F++M +RN V+W  I++G 
Sbjct: 367 QEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGC 426

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
               G   EA + F +M + G   ++    SVL AC   G
Sbjct: 427 CAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVG 466


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 318/971 (32%), Positives = 509/971 (52%), Gaps = 144/971 (14%)

Query: 23  CNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFK-----EM 77
           C+  I    R+G +  A ++FD MP R+ ++W  ++S Y H GM + A  ++       M
Sbjct: 37  CSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNM 96

Query: 78  VRAGFLLNRYA-LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA---MY 133
                LL+ Y  LG VL A                       + FDG++    +A   M 
Sbjct: 97  RTGAILLSGYGRLGRVLEA----------------------RRVFDGMLERNTVAWNAMI 134

Query: 134 GSCLESTDC--ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
              +++ D   ARR+F+ + +RD+ SWNS+++ Y      +    LF +M          
Sbjct: 135 SCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNL----- 189

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQ------ILAMVKKAGLLSDLYVGSALVSGFARLG 245
                       +++ ++SG   ++       I   + + GLL D    ++ +S    LG
Sbjct: 190 -----------VSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLG 238

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK-C 304
           N                     ++E  R         +++G    V +G  ++N+Y++  
Sbjct: 239 NL-------------------DVLESLRV------LALKTGFERDVVIGTAILNVYSRDT 273

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL--MSSNFSLIS 362
             +D +   F  MI ++  +W+TMI+ L   G  + AI  +    RD +  ++   +LI+
Sbjct: 274 SVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY---ERDPVKSIACRTALIT 330

Query: 363 TLSSCASL--GWIMLGQQIHGEGLKLGLDSDVSVS-NALLSLYADAGYLSRCLKVFFLMP 419
            L+ C  +    I+  Q          +   + VS NAL++ Y   G ++   ++F  MP
Sbjct: 331 GLAQCGRIDDARILFEQ----------IPEPIVVSWNALITGYMQNGMVNEAKELFDKMP 380

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             + +SW  +I  +A +     EA+    ++ R+G  P+  +  +I  A S+    + G 
Sbjct: 381 FRNTISWAGMIAGYAQN-GRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGT 439

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           QVH+  +K      +   NAL++ YGKC  M+   ++F+RM  + D VSWNS ++  + N
Sbjct: 440 QVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTK-DIVSWNSFLAALVQN 498

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSA----------------------------- 570
           +LL +A N    M+ R    D  ++ T++SA                             
Sbjct: 499 DLLDEARNTFDNMLSR----DDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPIL 554

Query: 571 ------CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
                 C S+   + G ++H   ++  ++ ++++ +AL+ MY KCG  D + R FDLM  
Sbjct: 555 TILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEE 613

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           R++++WN++I+GYA+HG G +A+ ++  M+  G LP+ VTFVG+L+ACSHAGLVDEG+K 
Sbjct: 614 RDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKF 673

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           FKSMSQ YGL P  E ++CMVDLLGR G++   E+FI  MPI P+++IW  +LGAC    
Sbjct: 674 FKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGAC--KI 731

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
            +  E+G++AA  LF +EP NA NYV+L+N+Y+S G W +VA+ RK MK+  V KE GCS
Sbjct: 732 HKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCS 791

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLV 864
           W  +KD +H FV GD+ H + + I   L+EL   ++  GYVP T+F L D++ E KE  +
Sbjct: 792 WTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSL 851

Query: 865 SYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
            YHSEK+AVA+ L    K +PI+I+KNLR+CGDCH+  KF+S +  R+I +RD NRFHHF
Sbjct: 852 LYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHF 911

Query: 924 NDGKCSCGDYW 934
            +G CSC D+W
Sbjct: 912 RNGSCSCEDFW 922



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 247/525 (47%), Gaps = 52/525 (9%)

Query: 12  LKHGFAYDVFLCNTLINVYVR-VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEA 70
           LK GF  DV +   ++NVY R    L +A K F+ M +RN  +W+ +++  +H G  + A
Sbjct: 251 LKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAA 310

Query: 71  CKMF-KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
             ++ ++ V++  +  R AL + L  C     +   F      +V+  N    G + N +
Sbjct: 311 IAVYERDPVKS--IACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGM 368

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           +          + A+ +F+++  R+ ISW  +I+ Y+Q G +     L   + R G   S
Sbjct: 369 V----------NEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPS 418

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
           L      F     +   ++ +G+    Q+ ++  K G   + +  +AL++ + +  N  Y
Sbjct: 419 LSSLTSIF--FACSNIVALETGT----QVHSLAVKVGCQFNSFACNALITMYGKCRNMEY 472

Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
           AR++F +M+ K++VS N  +            L+++ L                   +D+
Sbjct: 473 ARQVFSRMVTKDIVSWNSFLAA----------LVQNDL-------------------LDE 503

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +R+ F  M+ +D VSW T+IS         EA+  F  M  +  + ++  L   L  C S
Sbjct: 504 ARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGS 563

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           LG   +GQQIH   +KLG+DS++ V+NAL+S+Y   G  +   ++F LM E D  +WN++
Sbjct: 564 LGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTI 622

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-Y 488
           I  +A    L  EA+K Y  M  AG  PN VTF+ +L A S   +   G +    + + Y
Sbjct: 623 ITGYA-QHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDY 681

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            +         ++   G+ G++   E+    M    D V W++++
Sbjct: 682 GLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALL 726



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 171/376 (45%), Gaps = 54/376 (14%)

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           +VS  +A +      G +    +VF  MP  D ++WNS+I A+  +   + +A +   D 
Sbjct: 33  EVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNG--MPDAARDLYDA 90

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE-NALLSCYGKCGE 509
              G    G   ++          G+LG  + A+ +   +    T+  NA++SCY + G+
Sbjct: 91  ISGGNMRTGAILLS--------GYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGD 142

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHN----------ELLPKAMNLVWFMM------ 553
           +    ++F  M   RD  SWNSM++GY H+          E +P+   + W +M      
Sbjct: 143 ITMARRLFDAMPS-RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGR 201

Query: 554 ---------------QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
                          + G   D   FA+ LSA   +  L+    +    ++   E DVVI
Sbjct: 202 IENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVI 261

Query: 599 GSALVDMYSK-CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           G+A++++YS+    +D A +FF+ M  RN Y+W++MI+  +  G  D A+ ++ +     
Sbjct: 262 GTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER----D 317

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
           P+        +++  +  G +D+    F+ + +     P +  ++ ++    + G +++ 
Sbjct: 318 PVKSIACRTALITGLAQCGRIDDARILFEQIPE-----PIVVSWNALITGYMQNGMVNEA 372

Query: 718 EEFINKMPITPNSLIW 733
           +E  +KMP   N++ W
Sbjct: 373 KELFDKMPFR-NTISW 387



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 157/354 (44%), Gaps = 33/354 (9%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           Q+       D+   N+ +   V+   L  A   FD M  R+ VSW  I+S Y H   SNE
Sbjct: 475 QVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNE 534

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
           A   FK M     L N   L  +L  C   G S  K G Q+H + +K     + +V+N L
Sbjct: 535 AMGAFKTMFCEHELPNSPILTILLGVCGSLGAS--KIGQQIHTVAIKLGMDSELIVANAL 592

Query: 130 IAMYGSCLESTDCA--RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
           I+MY  C     CA  RRIF+ +E RD+ +WN+II+ Y+Q G      K++  M+  G  
Sbjct: 593 ISMYFKC----GCADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAG-- 646

Query: 188 YSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
             + PNE TF  L+ A +++ ++   +   +  +M +  GL       + +V    R G+
Sbjct: 647 --VLPNEVTFVGLLNACSHAGLVDEGWKFFK--SMSQDYGLTPLPEHYACMVDLLGRTGD 702

Query: 247 FYYARK-IFEQMIQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNM 300
              A + I++  I+ + V  + L+   +  K    G      LF +     G    L N+
Sbjct: 703 VQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNI 762

Query: 301 YAKCGTIDDSRSVFRFM-----IGKDSVSW-------NTMISGLDQNGCYEEAI 342
           Y+  G   +   V + M     I +   SW       ++ ++G  Q+   EE +
Sbjct: 763 YSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIV 816



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 20/197 (10%)

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
           E +V   SA +    + GR+  A   FD MP R++ +WNSMIS Y  +G  D A  L+  
Sbjct: 31  ELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDA 90

Query: 653 MKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG 712
           +   G +    T   +LS     G V E  + F  M     L      ++ M+    + G
Sbjct: 91  IS-GGNMR---TGAILLSGYGRLGRVLEARRVFDGM-----LERNTVAWNAMISCYVQNG 141

Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ-NAVNYVL 771
           ++       + MP + +   W ++L   C +      L    A  LFE  P+ N V++ +
Sbjct: 142 DITMARRLFDAMP-SRDVSSWNSMLTGYCHS------LQMVDARNLFEKMPERNLVSWTV 194

Query: 772 LANMYASGGKWEDVAKA 788
           + + Y   G+ E+  KA
Sbjct: 195 MISGY---GRIENHGKA 208


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 318/971 (32%), Positives = 509/971 (52%), Gaps = 144/971 (14%)

Query: 23  CNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFK-----EM 77
           C+  I    R+G +  A ++FD MP R+ ++W  ++S Y H GM + A  ++       M
Sbjct: 37  CSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNM 96

Query: 78  VRAGFLLNRYA-LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA---MY 133
                LL+ Y  LG VL A                       + FDG++    +A   M 
Sbjct: 97  RTGAILLSGYGRLGRVLEA----------------------RRVFDGMLERNTVAWNAMI 134

Query: 134 GSCLESTDC--ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
              +++ D   ARR+F+ + +RD+ SWNS+++ Y      +    LF +M          
Sbjct: 135 SCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNL----- 189

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQ------ILAMVKKAGLLSDLYVGSALVSGFARLG 245
                       +++ ++SG   ++       I   + + GLL D    ++ +S    LG
Sbjct: 190 -----------VSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLG 238

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK-C 304
           N                     ++E  R         +++G    V +G  ++N+Y++  
Sbjct: 239 NL-------------------DVLESLRV------LALKTGFERDVVIGTAILNVYSRDT 273

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL--MSSNFSLIS 362
             +D +   F  MI ++  +W+TMI+ L   G  + AI  +    RD +  ++   +LI+
Sbjct: 274 SVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY---ERDPVKSIACRTALIT 330

Query: 363 TLSSCASL--GWIMLGQQIHGEGLKLGLDSDVSVS-NALLSLYADAGYLSRCLKVFFLMP 419
            L+ C  +    I+  Q          +   + VS NAL++ Y   G ++   ++F  MP
Sbjct: 331 GLAQCGRIDDARILFEQ----------IPEPIVVSWNALITGYMQNGMVNEAKELFDKMP 380

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             + +SW  +I  +A +     EA+    ++ R+G  P+  +  +I  A S+    + G 
Sbjct: 381 FRNTISWAGMIAGYAQN-GRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGT 439

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           QVH+  +K      +   NAL++ YGKC  M+   ++F+RM  + D VSWNS ++  + N
Sbjct: 440 QVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTK-DIVSWNSFLAALVQN 498

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSA----------------------------- 570
           +LL +A N    M+ R    D  ++ T++SA                             
Sbjct: 499 DLLDEARNTFDNMLSR----DDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPIL 554

Query: 571 ------CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
                 C S+   + G ++H   ++  ++ ++++ +AL+ MY KCG  D + R FDLM  
Sbjct: 555 TILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEE 613

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           R++++WN++I+GYA+HG G +A+ ++  M+  G LP+ VTFVG+L+ACSHAGLVDEG+K 
Sbjct: 614 RDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKF 673

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           FKSMSQ YGL P  E ++CMVDLLGR G++   E+FI  MPI P+++IW  +LGAC    
Sbjct: 674 FKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGAC--KI 731

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
            +  E+G++AA  LF +EP NA NYV+L+N+Y+S G W +VA+ RK MK+  V KE GCS
Sbjct: 732 HKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCS 791

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLV 864
           W  +KD +H FV GD+ H + + I   L+EL   ++  GYVP T+F L D++ E KE  +
Sbjct: 792 WTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSL 851

Query: 865 SYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
            YHSEK+AVA+ L    K +PI+I+KNLR+CGDCH+  KF+S +  R+I +RD NRFHHF
Sbjct: 852 LYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHF 911

Query: 924 NDGKCSCGDYW 934
            +G CSC D+W
Sbjct: 912 RNGSCSCEDFW 922



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 247/525 (47%), Gaps = 52/525 (9%)

Query: 12  LKHGFAYDVFLCNTLINVYVR-VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEA 70
           LK GF  DV +   ++NVY R    L +A K F+ M +RN  +W+ +++  +H G  + A
Sbjct: 251 LKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAA 310

Query: 71  CKMF-KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
             ++ ++ V++  +  R AL + L  C     +   F      +V+  N    G + N +
Sbjct: 311 IAVYERDPVKS--IACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGM 368

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           +          + A+ +F+++  R+ ISW  +I+ Y+Q G +     L   + R G   S
Sbjct: 369 V----------NEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPS 418

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
           L      F     +   ++ +G+    Q+ ++  K G   + +  +AL++ + +  N  Y
Sbjct: 419 LSSLTSIF--FACSNIVALETGT----QVHSLAVKVGCQFNSFACNALITMYGKCRNMEY 472

Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
           AR++F +M+ K++VS N  +            L+++ L                   +D+
Sbjct: 473 ARQVFSRMVTKDIVSWNSFLAA----------LVQNDL-------------------LDE 503

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +R+ F  M+ +D VSW T+IS         EA+  F  M  +  + ++  L   L  C S
Sbjct: 504 ARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGS 563

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           LG   +GQQIH   +KLG+DS++ V+NAL+S+Y   G  +   ++F LM E D  +WN++
Sbjct: 564 LGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTI 622

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-Y 488
           I  +A    L  EA+K Y  M  AG  PN VTF+ +L A S   +   G +    + + Y
Sbjct: 623 ITGYA-QHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDY 681

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            +         ++   G+ G++   E+    M    D V W++++
Sbjct: 682 GLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALL 726



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 171/376 (45%), Gaps = 54/376 (14%)

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           +VS  +A +      G +    +VF  MP  D ++WNS+I A+  +   + +A +   D 
Sbjct: 33  EVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNG--MPDAARDLYDA 90

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE-NALLSCYGKCGE 509
              G    G   ++          G+LG  + A+ +   +    T+  NA++SCY + G+
Sbjct: 91  ISGGNMRTGAILLS--------GYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGD 142

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHN----------ELLPKAMNLVWFMM------ 553
           +    ++F  M   RD  SWNSM++GY H+          E +P+   + W +M      
Sbjct: 143 ITMARRLFDAMPS-RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGR 201

Query: 554 ---------------QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
                          + G   D   FA+ LSA   +  L+    +    ++   E DVVI
Sbjct: 202 IENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVI 261

Query: 599 GSALVDMYSK-CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           G+A++++YS+    +D A +FF+ M  RN Y+W++MI+  +  G  D A+ ++ +     
Sbjct: 262 GTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER----D 317

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
           P+        +++  +  G +D+    F+ + +     P +  ++ ++    + G +++ 
Sbjct: 318 PVKSIACRTALITGLAQCGRIDDARILFEQIPE-----PIVVSWNALITGYMQNGMVNEA 372

Query: 718 EEFINKMPITPNSLIW 733
           +E  +KMP   N++ W
Sbjct: 373 KELFDKMPFR-NTISW 387



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 157/354 (44%), Gaps = 33/354 (9%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           Q+       D+   N+ +   V+   L  A   FD M  R+ VSW  I+S Y H   SNE
Sbjct: 475 QVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNE 534

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
           A   FK M     L N   L  +L  C   G S  K G Q+H + +K     + +V+N L
Sbjct: 535 AMGAFKTMFCEHELPNSPILTILLGVCGSLGAS--KIGQQIHTVAIKLGMDSELIVANAL 592

Query: 130 IAMYGSCLESTDCA--RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
           I+MY  C     CA  RRIF+ +E RD+ +WN+II+ Y+Q G      K++  M+  G  
Sbjct: 593 ISMYFKC----GCADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAG-- 646

Query: 188 YSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
             + PNE TF  L+ A +++ ++   +   +  +M +  GL       + +V    R G+
Sbjct: 647 --VLPNEVTFVGLLNACSHAGLVDEGWKFFK--SMSQDYGLTPLPEHYACMVDLLGRTGD 702

Query: 247 FYYARK-IFEQMIQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNM 300
              A + I++  I+ + V  + L+   +  K    G      LF +     G    L N+
Sbjct: 703 VQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNI 762

Query: 301 YAKCGTIDDSRSVFRFM-----IGKDSVSW-------NTMISGLDQNGCYEEAI 342
           Y+  G   +   V + M     I +   SW       ++ ++G  Q+   EE +
Sbjct: 763 YSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIV 816



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 20/197 (10%)

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
           E +V   SA +    + GR+  A   FD MP R++ +WNSMIS Y  +G  D A  L+  
Sbjct: 31  ELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDA 90

Query: 653 MKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG 712
           +   G +    T   +LS     G V E  + F  M     L      ++ M+    + G
Sbjct: 91  IS-GGNMR---TGAILLSGYGRLGRVLEARRVFDGM-----LERNTVAWNAMISCYVQNG 141

Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ-NAVNYVL 771
           ++       + MP + +   W ++L   C +      L    A  LFE  P+ N V++ +
Sbjct: 142 DITMARRLFDAMP-SRDVSSWNSMLTGYCHS------LQMVDARNLFEKMPERNLVSWTV 194

Query: 772 LANMYASGGKWEDVAKA 788
           + + Y   G+ E+  KA
Sbjct: 195 MISGY---GRIENHGKA 208


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 289/786 (36%), Positives = 440/786 (55%), Gaps = 52/786 (6%)

Query: 193 NEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
           N Y +GSL+ +   +    +G YL  +I+    K G   DL+  + L++ + +  +   A
Sbjct: 43  NTYIYGSLLQSCIRNGDCATGKYLHCEII----KKGNCLDLFANNILLNFYVKYDSLPDA 98

Query: 251 RKIFEQMIQKNVVSMNGLMEGRRK------------------------------------ 274
            K+F++M  +N VS   L++G  +                                    
Sbjct: 99  AKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSA 158

Query: 275 -----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
                G  VH  + + G      VG  L++ Y+ CG  + +R VF  +  KD VSW  M+
Sbjct: 159 EWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMV 218

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
           +   +N C+EE++  F  MR  G   +NF+  S L +C  L    +G+ +HG   K    
Sbjct: 219 ACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYL 278

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
            ++ V   L+ LY  +G +   L+VF  MP+ D + W+ +I  +A SE    EA++ +  
Sbjct: 279 EELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQ-SEEAIEMFCR 337

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           MRR    PN  T  ++L A +S    +LG+Q+H  V+K  +     + NAL+  Y KCG 
Sbjct: 338 MRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGR 397

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           M++  ++F+  S    +VSWN++I GY+      KA+ L   M++   +    T+++VL 
Sbjct: 398 MENSLQLFSE-SPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLR 456

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           ACA +A LE G ++H+  V+   + + V+G+AL+DMY+KCG I  A   FD++   +  S
Sbjct: 457 ACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVS 516

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           WN+MISGY+ HG   +AL  F  M      PD VTFVG+LSACS+AGL+D G  +FKSM 
Sbjct: 517 WNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMV 576

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
           + Y + P  E ++CMV LLGR+G LDK  + ++++P  P+ ++WR +L AC   N    E
Sbjct: 577 EEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHN--DVE 634

Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMK 809
           LGR +A  + E+EP++   +VLL+N+YA+  +W +VA  R +MK   ++KE G SW+  +
Sbjct: 635 LGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQ 694

Query: 810 DGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSE 869
             VH F  GD SHP+  LI   L+ LN K R+ GYVP     L D+E   KE  +  HSE
Sbjct: 695 GRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSE 754

Query: 870 KIAVAFVLTRNSKL-PIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKC 928
           ++A+A+ L R   + P+RI+KNLR+C DCH+A K ISKIV R+I++RD NRFHHF++G C
Sbjct: 755 RLALAYGLIRTPSISPLRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGIC 814

Query: 929 SCGDYW 934
           SCGDYW
Sbjct: 815 SCGDYW 820



 Score =  247 bits (630), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 168/580 (28%), Positives = 277/580 (47%), Gaps = 53/580 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H +I+K G   D+F  N L+N YV+   L  A+KLFDEMPDRN+VS+  ++ GY+  
Sbjct: 64  KYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQC 123

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
              +EA  +F  +   G  LN +   +VL+          K G  VH  V K     D  
Sbjct: 124 LRFSEAIGLFSRLQGEGHELNPFVFSTVLKLL--VSAEWAKLGFSVHACVYKLGFDSDAF 181

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V   LI  Y  C    +CAR++F+ IE +D++SW  +++ Y +        KLFSRM+  
Sbjct: 182 VGTALIDCYSVC-GYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIV 240

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           GF    KPN +TF S++ A     L    + + +     K   L +L+VG  L+  + + 
Sbjct: 241 GF----KPNNFTFASVLKACVG--LEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKS 294

Query: 245 GNFYYARKIFEQMIQKNVV-----------------------------------SMNGLM 269
           G+   A ++FE+M + +V+                                   ++  L+
Sbjct: 295 GDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLL 354

Query: 270 EG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
           +        + G ++H ++++ GL   V V N L++MYAKCG +++S  +F        V
Sbjct: 355 QACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDV 414

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SWNT+I G  Q G  E+A++ F  M    +  +  +  S L +CA +  +  G QIH   
Sbjct: 415 SWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLS 474

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           +K   D +  V NAL+ +YA  G +     VF ++ EHDQVSWN++I  ++    L  EA
Sbjct: 475 VKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYS-VHGLYGEA 533

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLS 502
           +K +  M      P+ VTF+ IL+A S+  +   G      ++ +Y++         ++ 
Sbjct: 534 LKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVW 593

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
             G+ G +D   K+   +      + W +++S   IHN++
Sbjct: 594 LLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDV 633



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 178/604 (29%), Positives = 291/604 (48%), Gaps = 62/604 (10%)

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
            N Y  GS+L++C   G      G  +HC ++K     D   +N+L+  Y    +S   A
Sbjct: 42  FNTYIYGSLLQSCIRNGDCAT--GKYLHCEIIKKGNCLDLFANNILLNFYVK-YDSLPDA 98

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
            ++F+E+  R+ +S+ ++I  YSQ         LFSR+Q EG  + L P  + F +++  
Sbjct: 99  AKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEG--HELNP--FVFSTVLKL 154

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
             S+    + L   + A V K G  SD +VG+AL+  ++  G    AR++F+ +  K++V
Sbjct: 155 LVSA--EWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMV 212

Query: 264 SMNGL-----------------------------------------MEGRRKGKEVHGYL 282
           S  G+                                         +E    GK VHG  
Sbjct: 213 SWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCA 272

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
            ++   + + VG  L+++Y K G +DD+  VF  M   D + W+ MI+   Q+   EEAI
Sbjct: 273 FKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAI 332

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
             FC MRR  ++ + F+L S L +CASL  + LG QIH   +K+GLD +V VSNAL+ +Y
Sbjct: 333 EMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMY 392

Query: 403 ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
           A  G +   L++F   P    VSWN+VI  +  +     +A+  + DM         VT+
Sbjct: 393 AKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQA-GNGEKALILFKDMLECQVQGTEVTY 451

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
            ++L A +  +  + G Q+H+  +K      T + NAL+  Y KCG + D   +F  + E
Sbjct: 452 SSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLRE 511

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
             D+VSWN+MISGY  + L  +A+     M++   + D  TF  +LSAC++   L+RG  
Sbjct: 512 -HDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQA 570

Query: 583 -----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISG 636
                V    +  C E      + +V +  + G +D A++    +P   +V  W +++S 
Sbjct: 571 YFKSMVEEYDIEPCAEH----YTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSA 626

Query: 637 YARH 640
              H
Sbjct: 627 CVIH 630



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 140/289 (48%), Gaps = 16/289 (5%)

Query: 445 KYYLDMRRAGWSPNGVTFI--NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           + +L  R +  SP   T+I  ++L +         G  +H ++IK     +    N LL+
Sbjct: 28  RSFLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLN 87

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            Y K   + D  K+F  M +R + VS+ ++I GY       +A+ L   +   G  L+ F
Sbjct: 88  FYVKYDSLPDAAKLFDEMPDR-NTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPF 146

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
            F+TVL    S    + G  VHAC  +   + D  +G+AL+D YS CG  + A + FD +
Sbjct: 147 VFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAI 206

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
             +++ SW  M++ Y  +   +++L LFS+M++ G  P++ TF  VL AC        G 
Sbjct: 207 EYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACV-------GL 259

Query: 683 KHFKSMSQVYGL---IPQLEQFSC---MVDLLGRAGELDKIEEFINKMP 725
           + F     V+G       LE+      ++DL  ++G++D   +   +MP
Sbjct: 260 EVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMP 308


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 274/663 (41%), Positives = 403/663 (60%), Gaps = 4/663 (0%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R+GK++H  LI +G      + N LVNMY+KCG +D +  +F  M  ++ VSW  MISGL
Sbjct: 22  RRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGL 81

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            QN  + EAI  FC MR  G + + F+  S + +CASLG I +G+Q+H   LK G+ S++
Sbjct: 82  SQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSEL 141

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V + L  +Y+  G +    KVF  MP  D+VSW ++I  ++       EA+  +  M  
Sbjct: 142 FVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEF-EEALLAFKKMID 200

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
              + +     + L A  +    K G  VH+ V+K    ++  + NAL   Y K G+M+ 
Sbjct: 201 EEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMES 260

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
              +F   SE R+ VS+  +I GY+  E + K +++   + ++G   + FTF++++ ACA
Sbjct: 261 ASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACA 320

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
           + A LE+G ++HA  ++   + D  + S LVDMY KCG +++A + FD +      +WNS
Sbjct: 321 NQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNS 380

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           ++S + +HG G  A+  F +M   G  P+ +TF+ +L+ CSHAGLV+EG  +F SM + Y
Sbjct: 381 LVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTY 440

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
           G++P  E +SC++DLLGRAG L + +EFIN+MP  PN+  W + LGA CR +  K E+G+
Sbjct: 441 GVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGA-CRIHGDK-EMGK 498

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
            AA  L ++EP+N+   VLL+N+YA+  +WEDV   R  M++  VKK  G SWV +    
Sbjct: 499 LAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKT 558

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
           HVF A D SH  K  IYEKL  L  +++ AGYVP T     D++   KE L+  HSE+IA
Sbjct: 559 HVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIA 618

Query: 873 VAFVL-TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
           VAF L +     PI + KNLRVC DCHSA KFISK+ GR+I++RD++RFHHF DG CSCG
Sbjct: 619 VAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCG 678

Query: 932 DYW 934
           DYW
Sbjct: 679 DYW 681



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 194/387 (50%), Gaps = 7/387 (1%)

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
           ++    +L   + + A    +  G+Q+H   +  G      ++N L+++Y+  G L   L
Sbjct: 1   MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60

Query: 413 KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
           K+F  MP+ + VSW ++I   + +    SEA++ +  MR  G  P    F + + A +S 
Sbjct: 61  KLFDTMPQRNLVSWTAMISGLSQNSKF-SEAIRTFCGMRICGEVPTQFAFSSAIRACASL 119

Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
              ++G Q+H   +K+ + +E  + + L   Y KCG M D  K+F  M   +DEVSW +M
Sbjct: 120 GSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP-CKDEVSWTAM 178

Query: 533 ISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL 592
           I GY       +A+     M+     +D     + L AC ++   + G  VH+  V+   
Sbjct: 179 IDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGF 238

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDL-MPVRNVYSWNSMISGYARHGHGDKALTLFS 651
           E D+ +G+AL DMYSK G ++ AS  F +    RNV S+  +I GY      +K L++F 
Sbjct: 239 ESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFV 298

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGR 710
           +++  G  P+  TF  ++ AC++   +++G + H + M   +   P +   S +VD+ G+
Sbjct: 299 ELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGK 356

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVL 737
            G L+   +  +++   P  + W +++
Sbjct: 357 CGLLEHAIQAFDEIG-DPTEIAWNSLV 382



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 217/474 (45%), Gaps = 59/474 (12%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G Q+H L++ +  T    ++N L+ MY  C E  D A ++F+ +  R+L+SW ++IS  S
Sbjct: 24  GKQLHALLICAGYTPCTFLTNHLVNMYSKCGE-LDHALKLFDTMPQRNLVSWTAMISGLS 82

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
           Q        + F  M+  G      P ++ F S I A  S  L    + +Q+  +  K G
Sbjct: 83  QNSKFSEAIRTFCGMRICG----EVPTQFAFSSAIRACAS--LGSIEMGKQMHCLALKFG 136

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------ 274
           + S+L+VGS L   +++ G  + A K+FE+M  K+ VS   +++G  K            
Sbjct: 137 IGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFK 196

Query: 275 -----------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
                                        G+ VH  +++ G    + VGN L +MY+K G
Sbjct: 197 KMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAG 256

Query: 306 TIDDSRSVFRFMIGKDS-----VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
            ++ + +VF    G DS     VS+  +I G  +    E+ +  F  +RR G+  + F+ 
Sbjct: 257 DMESASNVF----GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTF 312

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
            S + +CA+   +  G Q+H + +K+  D D  VS+ L+ +Y   G L   ++ F  + +
Sbjct: 313 SSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGD 372

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
             +++WNS++  F     L  +A+K++  M   G  PN +TFI++L   S   + + G  
Sbjct: 373 PTEIAWNSLVSVFG-QHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLD 431

Query: 481 VHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
               + K Y V       + ++   G+ G + + ++   RM    +   W S +
Sbjct: 432 YFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 485



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 211/475 (44%), Gaps = 53/475 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++  G+    FL N L+N+Y + G+L  A KLFD MP RN VSW  ++SG 
Sbjct: 22  RRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGL 81

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +     +EA + F  M   G +  ++A  S +RAC   G    + G Q+HCL LK     
Sbjct: 82  SQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG--SIEMGKQMHCLALKFGIGS 139

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V + L  MY  C    D A ++FEE+  +D +SW ++I  YS+ G+       F +M
Sbjct: 140 ELFVGSNLEDMYSKCGAMFD-ACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKM 198

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             E     +  +++   S + A     L      + + + V K G  SD++VG+AL   +
Sbjct: 199 IDE----EVTIDQHVLCSTLGAC--GALKACKFGRSVHSSVVKLGFESDIFVGNALTDMY 252

Query: 242 ARLGNFYYARKIFEQMIQ-KNVVSMNGLMEG-----------------RRKGKE------ 277
           ++ G+   A  +F    + +NVVS   L++G                 RR+G E      
Sbjct: 253 SKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTF 312

Query: 278 ------------------VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                             +H  +++    +   V + LV+MY KCG ++ +   F  +  
Sbjct: 313 SSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGD 372

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQ 378
              ++WN+++S   Q+G  ++AI  F  M   G+  +  + IS L+ C+  G +  G   
Sbjct: 373 PTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDY 432

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            +      G+       + ++ L   AG L    +    MP E +   W S +GA
Sbjct: 433 FYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGA 487



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 147/315 (46%), Gaps = 19/315 (6%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD-EMPDRNSVSWACIVSGYTHKGM 66
           H  ++K GF  D+F+ N L ++Y + GD+ SAS +F  +   RN VS+ C++ GY     
Sbjct: 230 HSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQ 289

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             +   +F E+ R G   N +   S+++AC     +  + G Q+H  V+K N   D  VS
Sbjct: 290 IEKGLSVFVELRRQGIEPNEFTFSSLIKACA--NQAALEQGTQLHAQVMKINFDEDPFVS 347

Query: 127 NVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           ++L+ MYG C  LE    A + F+EI     I+WNS++SV+ Q G      K F RM   
Sbjct: 348 SILVDMYGKCGLLEH---AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDR 404

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G    +KPN  TF SL+T    + L     L    +M K  G++      S ++    R 
Sbjct: 405 G----VKPNAITFISLLTGCSHAGLVEEG-LDYFYSMDKTYGVVPGEEHYSCVIDLLGRA 459

Query: 245 GNFYYARKIFEQM-IQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG----LV 298
           G    A++   +M  + N       +   R  G +  G L    L  +    +G    L 
Sbjct: 460 GRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLS 519

Query: 299 NMYAKCGTIDDSRSV 313
           N+YA     +D RSV
Sbjct: 520 NIYANERQWEDVRSV 534


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 313/963 (32%), Positives = 511/963 (53%), Gaps = 123/963 (12%)

Query: 20   VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
            +F CNT I    R+G +  A ++F+EM  R+ VSW  +++GY+  G  +EA  +F   V 
Sbjct: 171  LFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFV- 229

Query: 80   AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
                      G  +R                   +L +    +G +              
Sbjct: 230  ----------GKNIRTWT----------------ILLTGYAKEGRIEE------------ 251

Query: 140  TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
               AR +FE +  R+++SWN++IS Y Q GD  +  KLF  M  +               
Sbjct: 252  ---AREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKN-------------- 294

Query: 200  LITAAYSSVLSG---SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
               A+++SV++G    Y + +   +  +    + +     ++SG+  + +++ A  +F +
Sbjct: 295  --VASWNSVVTGYCHCYRMSEARELFDQMPERNSV-SWMVMISGYVHISDYWEAWDVFVK 351

Query: 257  MIQKN-----------VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
            M +             + ++ GL +    G  +    I++G    V VG+ ++N Y + G
Sbjct: 352  MCRTVARPDQSIFVVVLSAITGLDDLELIGS-LRPIAIKTGYEGDVVVGSAILNAYTRNG 410

Query: 306  TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            ++D +   F  M  ++  SW TMI+   Q G  ++AI  +  +    + +      + ++
Sbjct: 411  SLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKT----AMMT 466

Query: 366  SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
            + A +G I   + I  E L    + +V   NA+++ Y   G L     +F  MP  +  S
Sbjct: 467  AYAQVGRIQKARLIFDEIL----NPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSAS 522

Query: 426  WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
            W ++I  F  +E    EA++  +++ R+G  P+  +F + L+A ++    ++G  +H+  
Sbjct: 523  WAAMIAGFVQNEE-SREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLA 581

Query: 486  IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN------ 539
            IK      + + N L+S Y KCG ++D   +F R    +D VSWNS+ISG   N      
Sbjct: 582  IKTGCQFNSYVMNGLISMYAKCGNVEDGSHVF-RTIRVKDTVSWNSLISGLSENYMLDDA 640

Query: 540  ----ELLPK---------------------AMNLVWFMMQRGQRLDHFTFATVLSACASV 574
                E +PK                     A++L   M+ RG + +  T  ++LSAC ++
Sbjct: 641  RVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNL 700

Query: 575  ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF--FDLMPVRNVYSWNS 632
              ++ G + HA   +   +  + +G++L+ MY KCG   Y   F  F+ MP  ++ +WN+
Sbjct: 701  GAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG---YEDGFCVFEEMPEHDLITWNA 757

Query: 633  MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
            ++ G A++G G +A+ +F QM+++G LPD ++F+GVL ACSHAGLVDEG+ HF SM+Q Y
Sbjct: 758  VLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKY 817

Query: 693  GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
            G++P +  ++CMVDLLGRAG L + E  I  MP+ P+S+IW  +LGA CR + R  ELG+
Sbjct: 818  GIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGA-CRIH-RNVELGQ 875

Query: 753  KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
            + A  LF+M    +  YVLL+N++AS G W+ VA+ RK MK+  + KE G SW+ +K+ +
Sbjct: 876  RVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKL 935

Query: 813  HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
            H FV GD +H + + IY  LKE     R  GY+P T F L D+E E K++ + YHSEK+A
Sbjct: 936  HCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEKLA 995

Query: 873  VAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
            V F +L+  +  PI+I+KNLR+CGDCH+  KF+SK+  R+I++RD NRFHHF DG CSCG
Sbjct: 996  VVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCSCG 1055

Query: 932  DYW 934
            DYW
Sbjct: 1056 DYW 1058



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 184/772 (23%), Positives = 326/772 (42%), Gaps = 131/772 (16%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV   N++IN Y + G +  A  LFD    +N  +W  +++GY  +G   EA ++F+ M 
Sbjct: 201 DVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMT 260

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS------NVLIAM 132
                 N  +  +++    + G             +  + + FD +        N ++  
Sbjct: 261 ER----NVVSWNAMISGYVQNGD------------LKNARKLFDEMPEKNVASWNSVVTG 304

Query: 133 YGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKP 192
           Y  C   ++ AR +F+++  R+ +SW  +IS Y    D    + +F +M R   R    P
Sbjct: 305 YCHCYRMSE-ARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVAR----P 359

Query: 193 NEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK 252
           ++  F  +++A   + L    L+  +  +  K G   D+ VGSA+++ + R G+   A  
Sbjct: 360 DQSIFVVVLSAI--TGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMH 417

Query: 253 IFEQMIQKNVVSMNGLME-----GR---------------------------RKGKEVHG 280
            FE M ++N  S   ++      GR                           + G+    
Sbjct: 418 FFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKA 477

Query: 281 YLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
            LI   + +  V   N ++  Y + G + +++ +F+ M  K+S SW  MI+G  QN    
Sbjct: 478 RLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESR 537

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           EA+     + R G + S+ S  S LS+CA++G + +G+ IH   +K G   +  V N L+
Sbjct: 538 EALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLI 597

Query: 400 SLYA------DAGYLSRCLK-------------------------VFFLMPEHDQVSWNS 428
           S+YA      D  ++ R ++                         VF  MP+ D VSW +
Sbjct: 598 SMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTA 657

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
           +I A+  +      A+  +LDM   G  PN +T  ++L+A  +    KLG Q HA + K 
Sbjct: 658 IISAYVQA-GHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKL 716

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNL 548
                  + N+L++ Y KCG  +D   +F  M E  D ++WN+++ G   N L  +A+ +
Sbjct: 717 GFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPE-HDLITWNAVLVGCAQNGLGKEAIKI 774

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
              M   G   D  +F  VL AC+    ++ G                            
Sbjct: 775 FEQMEVEGILPDQMSFLGVLCACSHAGLVDEGW--------------------------- 807

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
               +  ++ + +MP+  VY +  M+    R G+  +A  L   M +    PD V +  +
Sbjct: 808 -AHFNSMTQKYGIMPL--VYHYTCMVDLLGRAGYLSEAEALIENMPVK---PDSVIWEAL 861

Query: 669 LSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           L AC     V+ G +  + + Q+    P+   +  + +L    G  DK+ E 
Sbjct: 862 LGACRIHRNVELGQRVAERLFQMTK--PKSATYVLLSNLFASQGMWDKVAEI 911



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 131/523 (25%), Positives = 238/523 (45%), Gaps = 49/523 (9%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           +K G+  DV + + ++N Y R G L  A   F+ MP+RN  SW  +++ +   G  ++A 
Sbjct: 388 IKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAI 447

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
           +++ E V    +  + A+ +          +   F   ++  V+  N    G   N ++ 
Sbjct: 448 QLY-ERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLK 506

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
                      A+ +F+++  ++  SW ++I+ + Q  ++    +L   + R G      
Sbjct: 507 E----------AKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGS----V 552

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           P++ +F S ++A  +  +    + + I ++  K G   + YV + L+S +A+ GN     
Sbjct: 553 PSDSSFTSALSACAN--IGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGS 610

Query: 252 KIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
            +F  +  K+ VS N L+                         +GL   Y     +DD+R
Sbjct: 611 HVFRTIRVKDTVSWNSLI-------------------------SGLSENY----MLDDAR 641

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
            VF  M  +D VSW  +IS   Q G  E A+  F  M   G+  +  ++ S LS+C +LG
Sbjct: 642 VVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLG 701

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
            I LG+Q H    KLG D+ + V N+L+++Y   GY      VF  MPEHD ++WN+V+ 
Sbjct: 702 AIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGY-EDGFCVFEEMPEHDLITWNAVLV 760

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNV 490
             A +  L  EA+K +  M   G  P+ ++F+ +L A S   +   G    ++   KY +
Sbjct: 761 GCAQN-GLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGI 819

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
                    ++   G+ G + + E +   M  + D V W +++
Sbjct: 820 MPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALL 862



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 146/300 (48%), Gaps = 43/300 (14%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           + A+L   +IL      +V   N +I  Y + G L  A  LF +MP +NS SWA +++G+
Sbjct: 475 QKARLIFDEILNP----NVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGF 530

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                S EA ++  E+ R+G + +  +  S L AC   G    + G  +H L +K+   F
Sbjct: 531 VQNEESREALELLIELHRSGSVPSDSSFTSALSACANIG--DVEIGRVIHSLAIKTGCQF 588

Query: 122 DGLVSNVLIAMYGSC--------------LEST----------------DCARRIFEEIE 151
           +  V N LI+MY  C              ++ T                D AR +FE++ 
Sbjct: 589 NSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMP 648

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
            RD++SW +IIS Y Q G       LF  M   G    +KPN+ T  SL++A  +  L  
Sbjct: 649 KRDVVSWTAIISAYVQAGHGEVALDLFLDMLARG----IKPNQLTVTSLLSACGN--LGA 702

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             L +Q  A++ K G  + L+VG++L++ + + G +     +FE+M + ++++ N ++ G
Sbjct: 703 IKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVG 761



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/353 (24%), Positives = 150/353 (42%), Gaps = 50/353 (14%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG--- 60
            ++ H   +K G  ++ ++ N LI++Y + G++   S +F  +  +++VSW  ++SG   
Sbjct: 574 GRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSE 633

Query: 61  ----------------------------YTHKGMSNEACKMFKEMVRAGFLLNRYALGSV 92
                                       Y   G    A  +F +M+  G   N+  + S+
Sbjct: 634 NYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSL 693

Query: 93  LRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC-LESTDCARRIFEEIE 151
           L AC   G    K G Q H L+ K        V N LI MY  C  E   C   +FEE+ 
Sbjct: 694 LSACGNLG--AIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGYEDGFC---VFEEMP 748

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF-GSLITAAYSSVLS 210
             DLI+WN+++   +Q G      K+F +M+ EG    + P++ +F G L   +++ ++ 
Sbjct: 749 EHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEG----ILPDQMSFLGVLCACSHAGLVD 804

Query: 211 GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNVVSMNGLM 269
             +      +M +K G++  +Y  + +V    R G    A  + E M ++ + V    L+
Sbjct: 805 EGW--AHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALL 862

Query: 270 EGRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFRFM 317
              R  + V  G  +   LF M    +     L N++A  G  D    + + M
Sbjct: 863 GACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLM 915


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  524 bits (1349), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 287/721 (39%), Positives = 424/721 (58%), Gaps = 22/721 (3%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQ--KNVVSMN-----GLMEG------RRKGK 276
           DL   SA++S FA       A   F  M+Q  +N++  N      L+           G 
Sbjct: 106 DLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGL 165

Query: 277 EVHGYLIRSGLFD-MVAVGNGLVNMYAKCG-TIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            +  +L+++G FD  V VG  L++M+ K G  I  +R VF  M  K+ V+W  MI+   Q
Sbjct: 166 AIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQ 225

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G  ++A+  FC +         F+L S LS+C  L +  LG+Q+H   ++ GL SDV V
Sbjct: 226 LGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFV 285

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
              L+ +YA +  +    K+F  M  H+ +SW ++I  +  S     EA+K + +M    
Sbjct: 286 GCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQ-EQEAIKLFCNMLHGH 344

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
            +PN  TF ++L A +S     +G Q+H Q IK  ++    + N+L++ Y + G M+   
Sbjct: 345 VTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECAR 404

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           K F  + E+ + +S+N+      + + L    +    +   G     FT+A +LS  A +
Sbjct: 405 KAFNILFEK-NLISYNTAADA--NAKALDSDESFNHEVEHTGVGASPFTYACLLSGAACI 461

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
            T+ +G ++HA  V++    ++ I +AL+ MYSKCG  + A + F+ M  RNV +W S+I
Sbjct: 462 GTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSII 521

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
           SG+A+HG   KAL LF +M   G  P+ VT++ VLSACSH GL+DE +KHF SM   + +
Sbjct: 522 SGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSI 581

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
            P++E ++CMVDLLGR+G L +  EFIN MP   ++L+WRT LG+ CR + R T+LG  A
Sbjct: 582 SPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGS-CRVH-RNTKLGEHA 639

Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
           A  + E EP +   Y+LL+N+YAS G+W+DVA  RK+MK+ ++ KE G SW+ + + VH 
Sbjct: 640 AKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHK 699

Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVA 874
           F  GD SHP+   IY++L EL  K+++ GY+P T F L D+E E KE  +  HSEKIAVA
Sbjct: 700 FHVGDTSHPQARKIYDELDELALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVA 759

Query: 875 FVLTRNSKL-PIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
           + L    K  PIR+ KNLRVCGDCH+A K+IS + GREIV+RD+NRFHH  DGKCSC DY
Sbjct: 760 YALISTPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCNDY 819

Query: 934 W 934
           W
Sbjct: 820 W 820



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 157/583 (26%), Positives = 272/583 (46%), Gaps = 71/583 (12%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEM--PDRNSVSWACIVSGYT 62
           KL H +++  G   D  L N+LI +Y + GD  +A  +F  M    R+ VSW+ I+S + 
Sbjct: 59  KLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFA 118

Query: 63  HKGMSNEACKMFKEMV---RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           +  M + A   F  M+   R     N Y   ++LR+C    P  F  G+ +   +LK+  
Sbjct: 119 NNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCS--NPLFFTTGLAIFAFLLKTGY 176

Query: 120 TFDG--LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
            FD    V   LI M+         AR +F++++ ++L++W  +I+ YSQ G       L
Sbjct: 177 -FDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDL 235

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F R+    +     P+++T  SL++A     L    L +Q+ + V ++GL SD++VG  L
Sbjct: 236 FCRLLVSEY----TPDKFTLTSLLSACVE--LEFFSLGKQLHSWVIRSGLASDVFVGCTL 289

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------------------- 274
           V  +A+      +RKIF  M+  NV+S   L+ G  +                       
Sbjct: 290 VDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNC 349

Query: 275 ------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                             GK++HG  I+ GL  +  VGN L+NMYA+ GT++ +R  F  
Sbjct: 350 FTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNI 409

Query: 317 MIGKDSVSWNTM----ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           +  K+ +S+NT        LD +  +   +         G+ +S F+    LS  A +G 
Sbjct: 410 LFEKNLISYNTAADANAKALDSDESFNHEV------EHTGVGASPFTYACLLSGAACIGT 463

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
           I+ G+QIH   +K G  +++ ++NAL+S+Y+  G     L+VF  M   + ++W S+I  
Sbjct: 464 IVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISG 523

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN 492
           FA      ++A++ + +M   G  PN VT+I +L+A S   +     + H   + YN + 
Sbjct: 524 FA-KHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWK-HFNSMHYNHSI 581

Query: 493 ETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
              +E+   ++   G+ G + +  +    M    D + W + +
Sbjct: 582 SPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFL 624



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 181/365 (49%), Gaps = 22/365 (6%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH-- 421
           L +C   G + LG+ +H + +  GL  D  + N+L++LY+  G     L +F  M  H  
Sbjct: 46  LKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKR 105

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS---PNGVTFINILAAASSFSMGKLG 478
           D VSW+++I  FA++ ++ S A+  +L M +   +   PN   F  +L + S+      G
Sbjct: 106 DLVSWSAIISCFANN-SMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164

Query: 479 HQVHAQVIKYN-VANETTIENALLSCYGKCG-EMDDCEKIFARMSERRDEVSWNSMISGY 536
             + A ++K     +   +  AL+  + K G ++     +F +M + ++ V+W  MI+ Y
Sbjct: 165 LAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKM-QHKNLVTWTLMITRY 223

Query: 537 IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
               LL  A++L   ++      D FT  ++LSAC  +     G ++H+  +R+ L  DV
Sbjct: 224 SQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDV 283

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
            +G  LVDMY+K   ++ + + F+ M   NV SW ++ISGY +     +A+ LF  M   
Sbjct: 284 FVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHG 343

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ--LEQFSC----MVDLLGR 710
              P+  TF  VL AC  A L D G        Q++G   +  L   +C    ++++  R
Sbjct: 344 HVTPNCFTFSSVLKAC--ASLPDFGIG-----KQLHGQTIKLGLSTINCVGNSLINMYAR 396

Query: 711 AGELD 715
           +G ++
Sbjct: 397 SGTME 401



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM--PV 624
           +L AC     LE G  +H   + + L  D V+ ++L+ +YSKCG  + A   F  M    
Sbjct: 45  LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQM---KLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           R++ SW+++IS +A +    +AL  F  M     +   P+   F  +L +CS+      G
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164

Query: 682 FKHF 685
              F
Sbjct: 165 LAIF 168


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  524 bits (1349), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 303/838 (36%), Positives = 466/838 (55%), Gaps = 60/838 (7%)

Query: 143 ARRIFEEIETRD--LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
           A  +F++I  R   L   N ++  YS+   T     LF  +       SL+P+E T   +
Sbjct: 44  AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSL----LHSSLQPDESTLSCV 99

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
                 S L G  L +Q+     K GL+  + VG++LV  + +  N    R++F++M ++
Sbjct: 100 FNICAGS-LDGK-LGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGER 157

Query: 261 NVVSMNGLMEGRR-----------------------------------------KGKEVH 279
           NVVS   L+ G                                            G +VH
Sbjct: 158 NVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVH 217

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
             +++ G  + + V N L+++Y++ G + D+R VF  M  +D V+WN+MI+G  +NG   
Sbjct: 218 AMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDL 277

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           E    F  M+  G+  ++ +  S + SCASL  + L + +  + LK G  +D  V  AL+
Sbjct: 278 EVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALM 337

Query: 400 SLYADAGYLSRCLKVFFLMPE-HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
              +    +   L +F LM E  + VSW ++I     +     +AV  +  MRR G  PN
Sbjct: 338 VALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGG-NDQAVNLFSQMRREGVKPN 396

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
             T+  IL       + ++    HA+VIK N    +++  ALL  Y K G   D  K+F 
Sbjct: 397 HFTYSAILTVHYPVFVSEM----HAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVF- 451

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS-VATL 577
            + E +D ++W++M++GY       +A  L   +++ G + + FTF++V++ACAS  A  
Sbjct: 452 EIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAA 511

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
           E+G + HA  ++  L   + + SALV MY+K G ID A   F     R++ SWNSMISGY
Sbjct: 512 EQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGY 571

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
           ++HG   KAL +F +M+      D VTF+GV++AC+HAGLV++G K+F SM   + + P 
Sbjct: 572 SQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPT 631

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
           ++ +SCM+DL  RAG L+K    IN+MP  P + +WRT+LGA  R + R  ELG  AA  
Sbjct: 632 MKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGA-ARVH-RNVELGELAAEK 689

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           L  ++P+++  YVLL+NMYA+ G W++    RK M + +VKKE G SW+ +K+  + F+A
Sbjct: 690 LISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLA 749

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-V 876
           GD +HP  + IY KL EL+ +++DAGY P TK    D+E E KE ++S+HSE++A+AF +
Sbjct: 750 GDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGL 809

Query: 877 LTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +    ++PI+I+KNLRVCGDCH+  K +S +  R IV+RDSNRFHHF DG CSCGDYW
Sbjct: 810 IATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867



 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 159/576 (27%), Positives = 282/576 (48%), Gaps = 53/576 (9%)

Query: 1   SKDAKL---FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACI 57
           S D KL    H Q +K G    V +  +L+++Y++  ++    ++FDEM +RN VSW  +
Sbjct: 106 SLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSL 165

Query: 58  VSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
           ++GY+  G+     ++F +M   G L NRY + +V+ A    G  G   G+QVH +V+K 
Sbjct: 166 LAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVG--IGLQVHAMVVKH 223

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
                  V N LI++Y S L     AR +F+++E RD ++WNS+I+ Y + G  + VF++
Sbjct: 224 GFEEAIPVFNSLISLY-SRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEI 282

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F++MQ  G    +KP   TF S+I +  S  L    L++ +     K+G  +D  V +AL
Sbjct: 283 FNKMQLAG----VKPTHMTFASVIKSCAS--LRELALVKLMQCKALKSGFTTDQIVITAL 336

Query: 238 VSGFARLGNFYYARKIFEQMIQ-KNVVSMNGLMEG-----------------RRKG---- 275
           +   ++      A  +F  M + KNVVS   ++ G                 RR+G    
Sbjct: 337 MVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPN 396

Query: 276 ----------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                            E+H  +I++      +VG  L++ Y K G   D+  VF  +  
Sbjct: 397 HFTYSAILTVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEA 456

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS-LGWIMLGQQ 378
           KD ++W+ M++G  Q G  EEA   F  + ++G+  + F+  S +++CAS       G+Q
Sbjct: 457 KDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQ 516

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
            H   +K+ L++ + VS+AL+++YA  G +    +VF    E D VSWNS+I  ++    
Sbjct: 517 FHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQ-HG 575

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE- 497
              +A++ + +M++     + VTFI ++ A +   + + G +    +I  +  N T    
Sbjct: 576 QAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHY 635

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           + ++  Y + G ++    I   M        W +++
Sbjct: 636 SCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLL 671


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 277/754 (36%), Positives = 436/754 (57%), Gaps = 51/754 (6%)

Query: 228 LSDLYVGSALVSGFARLGNFYYAR--KIFEQM----IQKNVVSMNGLMEG------RRKG 275
           L D+   S++++ +A  GN + A+    FE+M    I+ N ++   +++         KG
Sbjct: 119 LRDVVTWSSMIAAYA--GNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKG 176

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           +++H  +   G+   VAV   L+ MY+KCG I  +  VF  M  ++ VSW  +I    Q+
Sbjct: 177 RKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQH 236

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
               EA   +  M + G+  +  + +S L+SC +   +  G++IH    + GL++D+ V+
Sbjct: 237 RKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVA 296

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS----EALVSEAVKYYLDMR 451
           NAL+++Y     +    ++F  M + D +SW+++I  +A S    +  + E  +    MR
Sbjct: 297 NALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMR 356

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
           R G  PN VTF++IL A ++    + G Q+HA++ K     + +++ A+ + Y KCG + 
Sbjct: 357 REGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIY 416

Query: 512 DCEKIFARMSER------------------------------RDEVSWNSMISGYIHNEL 541
           + E++F++M+ +                              R+ VSWN MI+GY  N  
Sbjct: 417 EAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGD 476

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
           + K   L+  M   G + D  T  T+L AC ++A LERG  VHA  V+  LE D V+ ++
Sbjct: 477 IVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATS 536

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+ MYSKCG++  A   FD M  R+  +WN+M++GY +HG G +A+ LF +M  +   P+
Sbjct: 537 LIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPN 596

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            +T   V+SACS AGLV EG + F+ M + + + P+ + + CMVDLLGRAG L + EEFI
Sbjct: 597 EITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFI 656

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
             MP  P+  +W  +LGAC   N    +L  +AA+ + E+EP  A  Y+ L+N+YA  G+
Sbjct: 657 QSMPCEPDISVWHALLGACKSHN--NVQLAERAAHHILELEPSYASVYITLSNIYAQAGR 714

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           W+D  K R+ M +  +KK+ G S + +   +H FVA D +HPE D I+ +L+ L ++M++
Sbjct: 715 WDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKE 774

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSA 900
           AGY P  +F L D++   KE  + +HSEK+A+A+ +L   S  PIRIMKNLRVCGDCH+A
Sbjct: 775 AGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTA 834

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            KFISKI  REIV RD+NRFH+FN+G CSCGD+W
Sbjct: 835 TKFISKIRKREIVARDANRFHYFNNGTCSCGDFW 868



 Score =  240 bits (613), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 166/590 (28%), Positives = 287/590 (48%), Gaps = 77/590 (13%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK VH  L   G+   + +GN L+N Y+K   +  +  VFR M  +D V+W++MI+    
Sbjct: 75  GKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAG 134

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N    +A   F  M    +  +  + +S L +C +   +  G++IH     +G+++DV+V
Sbjct: 135 NNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAV 194

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           + AL+++Y+  G +S   +VF  M E + VSW ++I A A    L +EA + Y  M +AG
Sbjct: 195 ATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKL-NEAFELYEQMLQAG 253

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
            SPN VTF+++L + ++      G ++H+ + +  +  +  + NAL++ Y KC  + +  
Sbjct: 254 ISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAR 313

Query: 515 KIFARMSERRDEVSWNSMISGYIHN-----ELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           +IF RMS +RD +SW++MI+GY  +     E + +   L+  M + G   +  TF ++L 
Sbjct: 314 EIFDRMS-KRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILR 372

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRI----------------- 612
           AC +   LE+G ++HA   +   E D  + +A+ +MY+KCG I                 
Sbjct: 373 ACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVA 432

Query: 613 --------------DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
                           A + F  MP RNV SWN MI+GYA++G   K   L S MK +G 
Sbjct: 433 WTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGF 492

Query: 659 LPDHVTFVGVLSACS-----------HAGLVDEGFKH----FKSMSQVYGLIPQLEQFSC 703
            PD VT + +L AC            HA  V  G +       S+  +Y    Q+ +   
Sbjct: 493 QPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEART 552

Query: 704 MVDLL---------------GRAGE-LDKIEEF--INKMPITPNSLIWRTVLGACCRANC 745
           + D +               G+ G+ L+ ++ F  + K  ++PN +    V+ AC RA  
Sbjct: 553 VFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGL 612

Query: 746 RKTELGRKAANML---FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAM 792
              + GR+   M+   F+M P+   +Y  + ++    G+ ++  +  ++M
Sbjct: 613 --VQEGREIFRMMQEDFKMTPRKQ-HYGCMVDLLGRAGRLQEAEEFIQSM 659



 Score =  215 bits (548), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 150/612 (24%), Positives = 279/612 (45%), Gaps = 92/612 (15%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +D K+ H Q+ + G   D++L N+LIN Y +  D+ASA ++F  M  R+ V+W+ +++ Y
Sbjct: 73  EDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAY 132

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                  +A   F+ M  A    NR    S+L+AC     S  + G ++H +V       
Sbjct: 133 AGNNHPAKAFDTFERMTDANIEPNRITFLSILKACN--NYSILEKGRKIHTIVKAMGMET 190

Query: 122 DGLVSNVLIAMYGSCLE-STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
           D  V+  LI MY  C E S  C   +F ++  R+++SW +II   +Q       F+L+ +
Sbjct: 191 DVAVATALITMYSKCGEISVAC--EVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQ 248

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M + G    + PN  TF SL+ +  +         ++I + + + GL +D+ V +AL++ 
Sbjct: 249 MLQAG----ISPNAVTFVSLLNSCNTP--EALNRGRRIHSHISERGLETDMIVANALITM 302

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG----------------------RR----- 273
           + +  +   AR+IF++M +++V+S + ++ G                      RR     
Sbjct: 303 YCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFP 362

Query: 274 -------------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                              +G+++H  L + G     ++   + NMYAKCG+I ++  VF
Sbjct: 363 NKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVF 422

Query: 315 RFMIGK-------------------------------DSVSWNTMISGLDQNGCYEEAIM 343
             M  K                               + VSWN MI+G  QNG   +   
Sbjct: 423 SKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFE 482

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
              +M+ +G      ++I+ L +C +L  +  G+ +H E +KLGL+SD  V+ +L+ +Y+
Sbjct: 483 LLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYS 542

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD-SEALVSEAVKYYLDMRRAGWSPNGVTF 462
             G ++    VF  M   D V+WN+++  +    + L  EAV  +  M +   SPN +T 
Sbjct: 543 KCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGL--EAVDLFKRMLKERVSPNEITL 600

Query: 463 INILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
             +++A S   + + G ++   + + + +         ++   G+ G + + E+    M 
Sbjct: 601 TAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMP 660

Query: 522 ERRDEVSWNSMI 533
              D   W++++
Sbjct: 661 CEPDISVWHALL 672



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 241/464 (51%), Gaps = 16/464 (3%)

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G   EAI     +++ GL+ ++ +    +  CA       G+ +H +  +LG++ D+ + 
Sbjct: 35  GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           N+L++ Y+    ++   +VF  M   D V+W+S+I A+A +    ++A   +  M  A  
Sbjct: 95  NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNH-PAKAFDTFERMTDANI 153

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            PN +TF++IL A +++S+ + G ++H  V    +  +  +  AL++ Y KCGE+    +
Sbjct: 154 EPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACE 213

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F +M+E R+ VSW ++I     +  L +A  L   M+Q G   +  TF ++L++C +  
Sbjct: 214 VFHKMTE-RNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPE 272

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            L RG  +H+      LE D+++ +AL+ MY KC  +  A   FD M  R+V SW++MI+
Sbjct: 273 ALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIA 332

Query: 636 GYARHGHGDK-----ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           GYA+ G+ DK        L  +M+ +G  P+ VTF+ +L AC+  G +++G +    +S+
Sbjct: 333 GYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSK 392

Query: 691 V-YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
           V + L   L+  + + ++  + G + + E+  +KM    N + W + L    +     + 
Sbjct: 393 VGFELDRSLQ--TAIFNMYAKCGSIYEAEQVFSKMA-NKNVVAWTSFLSMYIKCGDLSS- 448

Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMK 793
               A  +  EM  +N V++ L+   YA  G    V +   +MK
Sbjct: 449 ----AEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMK 488



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 123/517 (23%), Positives = 226/517 (43%), Gaps = 77/517 (14%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H  I + G   D+ + N LI +Y +   +  A ++FD M  R+ +SW+ +++GY   
Sbjct: 278 RRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQS 337

Query: 65  GMS-----NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           G       +E  ++ + M R G   N+    S+LRAC   G    + G Q+H  + K   
Sbjct: 338 GYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHG--ALEQGRQIHAELSKVGF 395

Query: 120 TFDGLVSNVLIAMYGSC----------------------------LESTD--CARRIFEE 149
             D  +   +  MY  C                            ++  D   A ++F E
Sbjct: 396 ELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSE 455

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
           + TR+++SWN +I+ Y+Q GD + VF+L S M+ EGF    +P+  T  +++ A     L
Sbjct: 456 MPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGF----QPDRVTVITILEAC--GAL 509

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
           +G    + + A   K GL SD  V ++L+  +++ G    AR +F++M  ++ V+ N ++
Sbjct: 510 AGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAML 569

Query: 270 EGRRKGKEVHGY----LIRSGLFDMVAVG----NGLVNMYAKCGTIDDSRSVFRFM---- 317
            G   G+   G     L +  L + V+        +++  ++ G + + R +FR M    
Sbjct: 570 AG--YGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDF 627

Query: 318 -IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
            +      +  M+  L + G  +EA     +M  +  +S   +L   L +C S   + L 
Sbjct: 628 KMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHAL---LGACKSHNNVQLA 684

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE--------HDQVSWNS 428
           ++     L+L   S  SV   L ++YA AG      KV  +M +           +  + 
Sbjct: 685 ERAAHHILELE-PSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDG 743

Query: 429 VIGAF-------ADSEALVSEAVKYYLDMRRAGWSPN 458
            I  F        + +A+ +E      +M+ AG++P+
Sbjct: 744 RIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPD 780


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 291/797 (36%), Positives = 453/797 (56%), Gaps = 48/797 (6%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS--RMQREGFRYSLKPNEYTFGSL 200
           AR++F+++  +D  SWN++IS Y   G  +   +LF     +      S+      FG  
Sbjct: 84  ARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCK 143

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
           + A                +M  +    S   +GS L                       
Sbjct: 144 VEA-----------FDLFRSMRLEGWKASQFTLGSVL----------------------- 169

Query: 261 NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM--I 318
            V S  GL++    G+ +HG+++++G    V V  GLV+MYAKC  + ++  +F+ +   
Sbjct: 170 RVCSSLGLIQ---TGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFD 226

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            K+ V W  M++G  QNG   +A+  F  M   G+  + ++  + L++C+S+     G+Q
Sbjct: 227 RKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQ 286

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           +HG  +K G  S+V V +AL+ +YA  G L     +   M + D VSWNS++  F     
Sbjct: 287 VHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFV-RHG 345

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
           L  EA++ + +M       +  TF ++L      S+      VH  +IK    N   + N
Sbjct: 346 LEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINP--KSVHGLIIKTGFENYKLVSN 403

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
           AL+  Y K G+MD    +F +M E+ D +SW S+++GY  N    +++ +   M   G  
Sbjct: 404 ALVDMYAKTGDMDCAYTVFEKMLEK-DVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVN 462

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
            D F  A++LSACA +  LE G +VH   +++ L +   + ++LV MY+KCG +D A   
Sbjct: 463 PDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAI 522

Query: 619 FDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLV 678
           F  M V++V +W ++I GYA++G G  +L  +  M   G  PD +TF+G+L ACSHAGLV
Sbjct: 523 FVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLV 582

Query: 679 DEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
           DEG K+F+ M++VYG+ P  E ++CM+DL GR+G+LD+ ++ +++M + P++ +W+++L 
Sbjct: 583 DEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLS 642

Query: 739 ACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVK 798
           A CR +    EL  +AA  LFE+EP NA+ YV+L+NMY++  KW DVAK RK MK   + 
Sbjct: 643 A-CRVH-ENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIV 700

Query: 799 KEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPE 858
           KE GCSW+ +   V+ F++ D  HP +  IY K+ E+  ++++AGYVP   F+L D++ E
Sbjct: 701 KEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHDMDKE 760

Query: 859 SKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDS 917
            KE  ++YHSEK+AVAF +L      PIRI KNLRVCGDCHSA K+IS++  R I+LRDS
Sbjct: 761 GKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHIILRDS 820

Query: 918 NRFHHFNDGKCSCGDYW 934
           N FHHF +G+CSCGDYW
Sbjct: 821 NCFHHFREGECSCGDYW 837



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 172/566 (30%), Positives = 290/566 (51%), Gaps = 53/566 (9%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D +  NT+I+ YV VG L  A +LFD    ++S++W+ I+SGY   G   EA  +F+ M 
Sbjct: 95  DEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMR 154

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             G+  +++ LGSVLR C   G    + G  +H  V+K+    +  V   L+ MY  C +
Sbjct: 155 LEGWKASQFTLGSVLRVCSSLGL--IQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKC-K 211

Query: 139 STDCARRIFE--EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
               A  +F+  E + ++ + W ++++ Y+Q GD     + F  M  +G    ++ N+YT
Sbjct: 212 CVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQG----VECNQYT 267

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           F +++TA  SSVL+  +  +Q+   + K+G  S++YV SALV  +A+ G+   A+ + E 
Sbjct: 268 FPTILTAC-SSVLARCF-GEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLET 325

Query: 257 MIQKNVVSMNGLMEG-RRKG--------------------------------------KE 277
           M   +VVS N LM G  R G                                      K 
Sbjct: 326 MEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKS 385

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VHG +I++G  +   V N LV+MYAK G +D + +VF  M+ KD +SW ++++G  QN  
Sbjct: 386 VHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNS 445

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
           +EE++  FC MR  G+    F + S LS+CA L  +  G+Q+H + +K GL    SV N+
Sbjct: 446 HEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNS 505

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+++YA  G L     +F  M   D ++W ++I  +A +      ++K+Y  M  +G  P
Sbjct: 506 LVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQN-GKGRNSLKFYDAMVSSGTRP 564

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKI 516
           + +TFI +L A S   +   G +   Q+ K Y +         ++  +G+ G++D+ +++
Sbjct: 565 DFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQL 624

Query: 517 FARMSERRDEVSWNSMISG-YIHNEL 541
             +M  + D   W S++S   +H  L
Sbjct: 625 LDQMDVKPDATVWKSLLSACRVHENL 650



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 236/484 (48%), Gaps = 41/484 (8%)

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS----------------- 330
           ++ +   N L+N  +K G ++D+R +F  M  KD  SWNTMIS                 
Sbjct: 62  YESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDG 121

Query: 331 --------------GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
                         G  + GC  EA   F +MR +G  +S F+L S L  C+SLG I  G
Sbjct: 122 CSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTG 181

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF--FLMPEHDQVSWNSVIGAFA 434
           + IHG  +K G + +V V   L+ +YA    +S    +F        + V W +++  +A
Sbjct: 182 EMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYA 241

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANET 494
            +     +AV+++  M   G   N  TF  IL A SS      G QVH  ++K    +  
Sbjct: 242 QN-GDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNV 300

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
            +++AL+  Y KCG++ + + +   M E  D VSWNS++ G++ + L  +A+ L   M  
Sbjct: 301 YVQSALVDMYAKCGDLKNAKNMLETM-EDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHG 359

Query: 555 RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
           R  ++D +TF +VL+ C   +   +   VH   ++   E   ++ +ALVDMY+K G +D 
Sbjct: 360 RNMKIDDYTFPSVLNCCVVGSINPKS--VHGLIIKTGFENYKLVSNALVDMYAKTGDMDC 417

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
           A   F+ M  ++V SW S+++GYA++   +++L +F  M++ G  PD      +LSAC+ 
Sbjct: 418 AYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAE 477

Query: 675 AGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
             L++ G + H   +    GL      ++ +V +  + G LD  +     M +  + + W
Sbjct: 478 LTLLEFGKQVHLDFIKS--GLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVK-DVITW 534

Query: 734 RTVL 737
             ++
Sbjct: 535 TAII 538



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 219/476 (46%), Gaps = 56/476 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD--EMPDRNSVSWACIVS 59
           +  ++ H  ++K+GF  +VF+   L+++Y +   ++ A  LF   E   +N V W  +V+
Sbjct: 179 QTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVT 238

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           GY   G   +A + F+ M   G   N+Y   ++L AC         FG QVH  ++KS  
Sbjct: 239 GYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARC--FGEQVHGFIVKSGF 296

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             +  V + L+ MY  C +  + A+ + E +E  D++SWNS++  + + G      +LF 
Sbjct: 297 GSNVYVQSALVDMYAKCGDLKN-AKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFK 355

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            M       ++K ++YTF S++       + GS   + +  ++ K G  +   V +ALV 
Sbjct: 356 NMHGR----NMKIDDYTFPSVLNCC----VVGSINPKSVHGLIIKTGFENYKLVSNALVD 407

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------- 274
            +A+ G+   A  +FE+M++K+V+S   L+ G  +                         
Sbjct: 408 MYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFI 467

Query: 275 ----------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                           GK+VH   I+SGL    +V N LV MYAKCG +DD+ ++F  M 
Sbjct: 468 VASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQ 527

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            KD ++W  +I G  QNG    ++  + AM   G      + I  L +C+  G +  G++
Sbjct: 528 VKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRK 587

Query: 379 IHGEGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
              +  K+ G+         ++ L+  +G L    ++   M  + D   W S++ A
Sbjct: 588 YFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSA 643



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 128/259 (49%), Gaps = 12/259 (4%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S + K  H  I+K GF     + N L+++Y + GD+  A  +F++M +++ +SW  +V+G
Sbjct: 380 SINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTG 439

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y       E+ K+F +M   G   +++ + S+L AC E   +  +FG QVH   +KS   
Sbjct: 440 YAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAEL--TLLEFGKQVHLDFIKSGLR 497

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
           +   V N L+AMY  C    D A  IF  ++ +D+I+W +II  Y+Q G   +  K +  
Sbjct: 498 WSQSVYNSLVAMYAKC-GCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDA 556

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           M   G R    P+  TF  L+ A   + L   G    QQ   M K  G+       + ++
Sbjct: 557 MVSSGTR----PDFITFIGLLFACSHAGLVDEGRKYFQQ---MNKVYGIKPGPEHYACMI 609

Query: 239 SGFARLGNFYYARKIFEQM 257
             F R G    A+++ +QM
Sbjct: 610 DLFGRSGKLDEAKQLLDQM 628


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 311/902 (34%), Positives = 495/902 (54%), Gaps = 67/902 (7%)

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV-SNVLIAMYGSCLESTDC 142
           +++ A+G +LRAC          G +VH LV  S++  + +V S  +IAMY +C   +D 
Sbjct: 90  ISKEAIGILLRACGH--HKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSD- 146

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRG---DTISVF-KLFSRMQREGFRYSLKPNEYTFG 198
           +R +F+  + +DL  +N+++S YS+     D IS+F +L S          L P+ +T  
Sbjct: 147 SRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATD-------LAPDNFTLP 199

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
            +  A     ++   L + + A+  KAG  SD +VG+AL++ + + G    A K+FE M 
Sbjct: 200 CVAKACAG--VADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMR 257

Query: 259 QKNVVSMNGLM------------------------EGR--------------------RK 274
            +N+VS N +M                        EG                     R 
Sbjct: 258 NRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRM 317

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G  VHG   + G+ + V V N LV+MY+KCG + ++R++F    GK+ VSWNT+I G  +
Sbjct: 318 GMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSK 377

Query: 335 NGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            G +         M+R+  +  N  ++++ L +C+    ++  ++IHG   + G   D  
Sbjct: 378 EGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDEL 437

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V+NA ++ YA    L    +VF  M      SWN++IGA A +     +++  +L M  +
Sbjct: 438 VANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQN-GFPGKSLDLFLVMMDS 496

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G  P+  T  ++L A +     + G ++H  +++  +  +  I  +L+S Y +C  M   
Sbjct: 497 GMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLG 556

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
           + IF +M E +  V WN MI+G+  NEL  +A++    M+  G +        VL AC+ 
Sbjct: 557 KLIFDKM-ENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQ 615

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           V+ L  G EVH+  ++A L  D  +  AL+DMY+KCG ++ +   FD +  ++   WN +
Sbjct: 616 VSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVI 675

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I+GY  HGHG KA+ LF  M+  G  PD  TF+GVL AC+HAGLV EG K+   M  +YG
Sbjct: 676 IAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYG 735

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           + P+LE ++C+VD+LGRAG+L +  + +N+MP  P+S IW ++L +C   N    E+G +
Sbjct: 736 VKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSC--RNYGDLEIGEE 793

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
            +  L E+EP  A NYVLL+N+YA  GKW++V K R+ MKE  + K+AGCSW+ +   V+
Sbjct: 794 VSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVY 853

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
            F+  D S  E   I +   +L +K+   GY P T   L +LE E K  ++  HSEK+A+
Sbjct: 854 RFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIKILKSHSEKLAI 913

Query: 874 AFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           +F L   +K   +R+ KNLR+C DCH+A K +SK+V R+I++RD+ RFHHF +G C+CGD
Sbjct: 914 SFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGD 973

Query: 933 YW 934
           +W
Sbjct: 974 FW 975



 Score =  258 bits (660), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 202/683 (29%), Positives = 319/683 (46%), Gaps = 73/683 (10%)

Query: 14  HGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKM 73
           H    DV L   +I +Y   G  + +  +FD   +++   +  ++SGY+   +  +A  +
Sbjct: 122 HKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISL 181

Query: 74  FKEMVRAGFLL-NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAM 132
           F E++ A  L  + + L  V +AC   G +  + G  VH L LK+    D  V N LIAM
Sbjct: 182 FLELLSATDLAPDNFTLPCVAKACA--GVADVELGEAVHALALKAGGFSDAFVGNALIAM 239

Query: 133 YGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR---GDTISVFKLFSRMQREGFRYS 189
           YG C    + A ++FE +  R+L+SWNS++   S+    G+   VFK     + EG    
Sbjct: 240 YGKC-GFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEG---- 294

Query: 190 LKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           L P+  T  ++I   AA   V  G      +  +  K G+  ++ V ++LV  +++ G  
Sbjct: 295 LVPDVATMVTVIPACAAVGEVRMG----MVVHGLAFKLGITEEVTVNNSLVDMYSKCGYL 350

Query: 248 YYARKIFEQMIQKNVVSMNGLM-----EGRRKG--------------------------- 275
             AR +F+    KNVVS N ++     EG  +G                           
Sbjct: 351 GEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPA 410

Query: 276 ----------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                     KE+HGY  R G      V N  V  YAKC ++D +  VF  M GK   SW
Sbjct: 411 CSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSW 470

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N +I    QNG   +++  F  M   G+    F++ S L +CA L ++  G++IHG  L+
Sbjct: 471 NALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLR 530

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            GL+ D  +  +L+SLY     +     +F  M     V WN +I  F+ +E L  EA+ 
Sbjct: 531 NGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNE-LPCEALD 589

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            +  M   G  P  +    +L A S  S  +LG +VH+  +K +++ +  +  AL+  Y 
Sbjct: 590 TFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYA 649

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGY-IHNELLPKAMNLVWFMMQRGQRLDHFTF 564
           KCG M+  + IF R++E +DE  WN +I+GY IH   L KA+ L   M  +G R D FTF
Sbjct: 650 KCGCMEQSQNIFDRVNE-KDEAVWNVIIAGYGIHGHGL-KAIELFELMQNKGGRPDSFTF 707

Query: 565 ATVLSACASVATLERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
             VL AC     +  G++      +  GV+  LE    +    VDM  + G++  A +  
Sbjct: 708 LGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACV----VDMLGRAGQLTEALKLV 763

Query: 620 DLMPVR-NVYSWNSMISGYARHG 641
           + MP   +   W+S++S    +G
Sbjct: 764 NEMPDEPDSGIWSSLLSSCRNYG 786



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 157/576 (27%), Positives = 266/576 (46%), Gaps = 62/576 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   LK G   D F+ N LI +Y + G + SA K+F+ M +RN VSW  ++   +  G  
Sbjct: 218 HALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGF 277

Query: 68  NEACKMFKEMV---RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            E C +FK ++     G + +   + +V+ AC   G    + GM VH L  K   T +  
Sbjct: 278 GECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGE--VRMGMVVHGLAFKLGITEEVT 335

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V+N L+ MY  C    + AR +F+    ++++SWN+II  YS+ GD   VF+L   MQRE
Sbjct: 336 VNNSLVDMYSKCGYLGE-ARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQRE 394

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYL---LQQILAMVKKAGLLSDLYVGSALVSGF 241
                ++ NE T  +++ A      SG +    L++I     + G L D  V +A V+ +
Sbjct: 395 ---EKVRVNEVTVLNVLPAC-----SGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAY 446

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------------------------- 272
           A+  +   A ++F  M  K V S N L+                                
Sbjct: 447 AKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIG 506

Query: 273 ------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                       R GKE+HG+++R+GL     +G  L+++Y +C ++   + +F  M  K
Sbjct: 507 SLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENK 566

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
             V WN MI+G  QN    EA+  F  M   G+     ++   L +C+ +  + LG+++H
Sbjct: 567 SLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVH 626

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA-DSEAL 439
              LK  L  D  V+ AL+ +YA  G + +   +F  + E D+  WN +I  +      L
Sbjct: 627 SFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGL 686

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIEN 498
             +A++ +  M+  G  P+  TF+ +L A +   +   G +   Q+   Y V  +     
Sbjct: 687 --KAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYA 744

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            ++   G+ G++ +  K+   M +  D   W+S++S
Sbjct: 745 CVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLS 780



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 169/363 (46%), Gaps = 52/363 (14%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  +L++G   D F+  +L+++Y++   +     +FD+M +++ V W  +++G++ 
Sbjct: 521 GKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQ 580

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
             +  EA   F++M+  G      A+  VL AC +   S  + G +VH   LK++ + D 
Sbjct: 581 NELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQV--SALRLGKEVHSFALKAHLSEDA 638

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V+  LI MY  C    + ++ IF+ +  +D   WN II+ Y   G  +   +LF  MQ 
Sbjct: 639 FVTCALIDMYAKC-GCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQN 697

Query: 184 EGFRYSLKPNEYTF-GSLITAAYSSVLSG--SYLLQQ---------------ILAMVKKA 225
           +G R    P+ +TF G LI   ++ +++    YL Q                ++ M+ +A
Sbjct: 698 KGGR----PDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRA 753

Query: 226 GLLS-------------DLYVGSALVSGFARLGNFYYARKIFEQMIQ------KNVVSMN 266
           G L+             D  + S+L+S     G+     ++ +++++      +N V ++
Sbjct: 754 GQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLS 813

Query: 267 GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
            L  G  K  EV    +R  + +     NGL +  A C  I+    V+RF++   S+S +
Sbjct: 814 NLYAGLGKWDEVRK--VRQRMKE-----NGL-HKDAGCSWIEIGGMVYRFLVSDGSLSES 865

Query: 327 TMI 329
             I
Sbjct: 866 KKI 868



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 105/487 (21%), Positives = 210/487 (43%), Gaps = 53/487 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H    +HGF  D  + N  +  Y +   L  A ++F  M  +   SW  ++  +   
Sbjct: 421 KEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQN 480

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKF---GMQVHCLVLKSNQTF 121
           G   ++  +F  M+ +G   +R+ +GS+L AC        KF   G ++H  +L++    
Sbjct: 481 GFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACAR-----LKFLRCGKEIHGFMLRNGLEL 535

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  +   L+++Y  C  S    + IF+++E + L+ WN +I+ +SQ          F +M
Sbjct: 536 DEFIGISLMSLYIQC-SSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQM 594

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
              G    +KP E     ++ A   S +S   L +++ +   KA L  D +V  AL+  +
Sbjct: 595 LSGG----IKPQEIAVTGVLGAC--SQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMY 648

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS-GLFDMVAVGNGLVNM 300
           A+ G    ++ IF+++ +K+    N ++ G      +HG+ +++  LF+++    G  + 
Sbjct: 649 AKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYG----IHGHGLKAIELFELMQNKGGRPDS 704

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           +   G +           G   +     + G+     +   +++   + R G ++    L
Sbjct: 705 FTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDM--LGRAGQLTEALKL 762

Query: 361 I-------------STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAG 406
           +             S LSSC + G + +G+++  + L+  L+ + + +  LLS LYA  G
Sbjct: 763 VNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLE--LEPNKAENYVLLSNLYAGLG 820

Query: 407 YLSRCLKVFFLMPEHD-----QVSWNSV----------IGAFADSEALVSEAVKYYLDMR 451
                 KV   M E+        SW  +           G+ ++S+ +    +K    + 
Sbjct: 821 KWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKIS 880

Query: 452 RAGWSPN 458
           + G+ P+
Sbjct: 881 KIGYKPD 887


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 273/648 (42%), Positives = 399/648 (61%), Gaps = 17/648 (2%)

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           VAVG+ L++M A+ G +  +R VF  +I K  V W  +IS   Q  C EEA+  F     
Sbjct: 188 VAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLE 247

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY--- 407
           DG     +++ S +S+C  LG + LG Q+H   L++GL SD  VS  L+ +YA +     
Sbjct: 248 DGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQA 307

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +    KVF  MP++D +SW ++I  +  S    ++ +  + +M      PN +T+ +IL 
Sbjct: 308 MDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILK 367

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
           + +S S    G QVHA VIK N A+  T+ NAL+S Y + G M++  ++F ++ ER    
Sbjct: 368 SCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYER---- 423

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
              SMI         P    +V   M  G  +   TFA+++SA ASV  L +G ++HA  
Sbjct: 424 ---SMIPCITEGRDFPLDHRIV--RMDVG--ISSSTFASLISAAASVGMLTKGQQLHAMS 476

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
           ++A    D  + ++LV MYS+CG ++ A R F+ +  RNV SW SMISG A+HG+ ++AL
Sbjct: 477 LKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERAL 536

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDL 707
           +LF  M L G  P+ VT++ VLSACSH GLV EG ++F+SM + +GLIP++E ++CMVDL
Sbjct: 537 SLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDL 596

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAV 767
           L R+G + +  EFIN+MP+  ++L+W+T+LGAC   +    E+G   A  + E+EP++  
Sbjct: 597 LARSGIVKEALEFINEMPLKADALVWKTLLGACRSHD--NIEVGEITAKNVVELEPRDPA 654

Query: 768 NYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDL 827
            YVLL+N+YA  G W++VA+ R AM++  + KE G SW+ +++  H F AGD SHP    
Sbjct: 655 PYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQD 714

Query: 828 IYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIR 886
           IY KL  L ++++  GYVP T   L D+  E KE  +  HSEKIAVAF ++T ++  PIR
Sbjct: 715 IYGKLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIR 774

Query: 887 IMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           I KNLRVC DCHSA K++SK   REI+LRDSNRFH   DG+CSCG+YW
Sbjct: 775 IFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 227/452 (50%), Gaps = 48/452 (10%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV + + LI++  R GDLASA K+FD + ++  V W  ++S Y     + EA ++F + +
Sbjct: 187 DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFL 246

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG--SC 136
             GF  +RY + S++ AC E G    + G+Q+H L L+     D  VS  L+ MY   + 
Sbjct: 247 EDGFEPDRYTMSSMISACTELG--SVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNI 304

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRG-DTISVFKLFSRMQREGFRYSLKPNEY 195
            ++ D A ++FE +   D+ISW ++IS Y Q G     V  LF  M  E    S+KPN  
Sbjct: 305 GQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNE----SIKPNHI 360

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
           T+ S++ +  S  +S     +Q+ A V K+   S   VG+ALVS +A  G    AR++F 
Sbjct: 361 TYSSILKSCAS--ISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFN 418

Query: 256 QMIQKNVVSMNGLMEGR---------------------------------RKGKEVHGYL 282
           Q+ +++++    + EGR                                  KG+++H   
Sbjct: 419 QLYERSMIPC--ITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMS 476

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
           +++G      V N LV+MY++CG ++D+   F  +  ++ +SW +MISGL ++G  E A+
Sbjct: 477 LKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERAL 536

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IHGEGLKLGLDSDVSVSNALLSL 401
             F  M   G+  ++ + I+ LS+C+ +G +  G++         GL   +     ++ L
Sbjct: 537 SLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDL 596

Query: 402 YADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            A +G +   L+    MP + D + W +++GA
Sbjct: 597 LARSGIVKEALEFINEMPLKADALVWKTLLGA 628



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 166/631 (26%), Positives = 287/631 (45%), Gaps = 77/631 (12%)

Query: 104 FKFGMQVHCLVLKSNQ-TFDGLVSNVLIAMYGSCLESTDCARRIFEEIE-TRDLISWNSI 161
            + G  +H  +L+ +    D +V+N L+ +Y  C  +   AR +F+ +   RD++SW ++
Sbjct: 64  LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRC-GAVASARNVFDGMRGLRDIVSWTAM 122

Query: 162 ISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAM 221
            S  ++ G       L   M   G    L PN YT  +   A +   L        +  +
Sbjct: 123 ASCLARNGAERGSLLLIGEMLESG----LLPNAYTLCAAAHACFPHELYCLVGGVVLGLV 178

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV------------------ 263
            K     +D+ VGSAL+   AR G+   ARK+F+ +I+K VV                  
Sbjct: 179 HKMGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEA 238

Query: 264 -----------------SMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
                            +M+ ++         R G ++H   +R GL     V  GLV+M
Sbjct: 239 VELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDM 298

Query: 301 YAKCG---TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN-FCAMRRDGLMSS 356
           YAK      +D +  VF  M   D +SW  +ISG  Q+G  E  +M  F  M  + +  +
Sbjct: 299 YAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPN 358

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
           + +  S L SCAS+     G+Q+H   +K    S  +V NAL+S+YA++G +    +VF 
Sbjct: 359 HITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVF- 417

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR--RAGWSPNGVTFINILAAASSFSM 474
                +Q+   S+I         ++E   + LD R  R     +  TF ++++AA+S  M
Sbjct: 418 -----NQLYERSMI-------PCITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGM 465

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
              G Q+HA  +K    ++  + N+L+S Y +CG ++D  + F  + + R+ +SW SMIS
Sbjct: 466 LTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKD-RNVISWTSMIS 524

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR-ACLE 593
           G   +    +A++L   M+  G + +  T+  VLSAC+ V  +  G E      R   L 
Sbjct: 525 GLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLI 584

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGH---GDKALTL 649
             +   + +VD+ ++ G +  A  F + MP++ +   W +++     H +   G+     
Sbjct: 585 PRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKN 644

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
             +++   P P    +V + +  + AGL DE
Sbjct: 645 VVELEPRDPAP----YVLLSNLYADAGLWDE 671



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 234/518 (45%), Gaps = 84/518 (16%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPD-RNSVSWACIVSGYTHKGMSNEACKMFKEM 77
           D  + N+L+ +Y R G +ASA  +FD M   R+ VSW  + S     G    +  +  EM
Sbjct: 83  DAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGEM 142

Query: 78  VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF---------DGLVSNV 128
           + +G L N Y L +   AC         F  +++CLV                D  V + 
Sbjct: 143 LESGLLPNAYTLCAAAHAC---------FPHELYCLVGGVVLGLVHKMGLWGTDVAVGSA 193

Query: 129 LIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRY 188
           LI M     +    AR++F+ +  + ++ W  +IS Y Q        +LF     +GF  
Sbjct: 194 LIDMLARNGDLAS-ARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGF-- 250

Query: 189 SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR--LGN 246
             +P+ YT  S+I+A   + L    L  Q+ ++  + GL SD  V   LV  +A+  +G 
Sbjct: 251 --EPDRYTMSSMISAC--TELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQ 306

Query: 247 -FYYARKIFEQMIQKNVVSMNGLMEG---------------------------------- 271
              YA K+FE+M + +V+S   L+ G                                  
Sbjct: 307 AMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSIL 366

Query: 272 --------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      G++VH ++I+S       VGN LV+MYA+ G ++++R VF  +  +   
Sbjct: 367 KSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYER--- 423

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRD-GLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
              +MI  + +   +    ++   +R D G+ SS F+  S +S+ AS+G +  GQQ+H  
Sbjct: 424 ---SMIPCITEGRDFP---LDHRIVRMDVGISSSTFA--SLISAAASVGMLTKGQQLHAM 475

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            LK G  SD  VSN+L+S+Y+  GYL    + F  + + + +SW S+I   A        
Sbjct: 476 SLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLA-KHGYAER 534

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
           A+  + DM   G  PN VT+I +L+A S   + + G +
Sbjct: 535 ALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKE 572



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 179/375 (47%), Gaps = 37/375 (9%)

Query: 371 GWIMLGQQIHGEGLKLGL-DSDVSVSNALLSLYADAGYLSRCLKVFFLMPE-HDQVSWNS 428
           G + LG+ +H   L+  L D D  V+N+LL+LY+  G ++    VF  M    D VSW +
Sbjct: 62  GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
           +    A + A    ++    +M  +G  PN  T     AA + F      H+++  V   
Sbjct: 122 MASCLARNGA-ERGSLLLIGEMLESGLLPNAYTLCA--AAHACFP-----HELYCLVGGV 173

Query: 489 NV---------ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
            +           +  + +AL+    + G++    K+F  + E +  V W  +IS Y+  
Sbjct: 174 VLGLVHKMGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIE-KTVVVWTLLISRYVQG 232

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
           E   +A+ L    ++ G   D +T ++++SAC  + ++  G+++H+  +R  L  D  + 
Sbjct: 233 ECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVS 292

Query: 600 SALVDMYSKCG---RIDYASRFFDLMPVRNVYSWNSMISGYARHG-HGDKALTLFSQMKL 655
             LVDMY+K      +DYA++ F+ MP  +V SW ++ISGY + G   +K + LF +M  
Sbjct: 293 CGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLN 352

Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS------CMVDLLG 709
           +   P+H+T+  +L +C+     D G        QV+  + +  Q S       +V +  
Sbjct: 353 ESIKPNHITYSSILKSCASISDHDSG-------RQVHAHVIKSNQASAHTVGNALVSMYA 405

Query: 710 RAGELDKIEEFINKM 724
            +G +++     N++
Sbjct: 406 ESGCMEEARRVFNQL 420



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 137/304 (45%), Gaps = 16/304 (5%)

Query: 476 KLGHQVHAQVIKYNVAN-ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           +LG  +H ++++ ++ + +  + N+LL+ Y +CG +     +F  M   RD VSW +M S
Sbjct: 65  RLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMAS 124

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS-----VATLERGMEVHACGVR 589
               N     ++ L+  M++ G   + +T      AC       +        VH  G+ 
Sbjct: 125 CLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLW 184

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
                DV +GSAL+DM ++ G +  A + FD +  + V  W  +IS Y +    ++A+ L
Sbjct: 185 GT---DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEL 241

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           F     DG  PD  T   ++SAC+  G V  G +   S++   GL         +VD+  
Sbjct: 242 FLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQ-LHSLALRMGLASDACVSCGLVDMYA 300

Query: 710 RAG---ELDKIEEFINKMPITPNSLI-WRTVLGACCRANCRKTELGRKAANMLFEMEPQN 765
           ++     +D   +   +MP   N +I W  ++    ++  ++ ++      ML E    N
Sbjct: 301 KSNIGQAMDYANKVFERMP--KNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPN 358

Query: 766 AVNY 769
            + Y
Sbjct: 359 HITY 362



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 50/94 (53%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   LK GF  D F+ N+L+++Y R G L  A + F+E+ DRN +SW  ++SG    G 
Sbjct: 472 LHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGY 531

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           +  A  +F +M+  G   N     +VL AC   G
Sbjct: 532 AERALSLFHDMILTGVKPNDVTYIAVLSACSHVG 565


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 301/859 (35%), Positives = 471/859 (54%), Gaps = 68/859 (7%)

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           + N L+ +Y  C ES      +F  +E RD  SW +II+ Y++ G       +F RMQ+E
Sbjct: 64  LGNHLLRLYLKC-ESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQE 122

Query: 185 GFRYSLKPNEYTFGSLITAA----------------YSSVLSGSYLLQQIL--------- 219
           G R     +  TF +++ A                   S L G  +L  +L         
Sbjct: 123 GVRC----DAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGC 178

Query: 220 ---AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---- 272
              AM+    +  DL   +A ++  A+ G+   A ++F++M       + G+   R    
Sbjct: 179 VASAMLLFERMERDLVSWNAAIAANAQSGDLDMALELFQRM------QLEGVRPARITLV 232

Query: 273 ---------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                    R+ + +H  +  SGL   + V   L + YA+ G +D ++ VF     +D V
Sbjct: 233 ITLSVCAKIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVV 292

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SWN M+    Q+G   EA + F  M  +G+  S  +L++  + C+SL     G+ IH   
Sbjct: 293 SWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSL---RFGRMIHACA 349

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           L+ GLD D+ + NALL +Y   G       +F  +P  + VSWN++I A +  +  +  A
Sbjct: 350 LEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP-GNAVSWNTMI-AGSSQKGQMKRA 407

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASS-----FSMGKLGHQVHAQVIKYNVANETTIEN 498
           ++ +  M+  G +P   T++N+L A +S      +M + G ++H++++    A+E  I  
Sbjct: 408 LELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAE-GRKLHSRIVSCGYASEPAIGT 466

Query: 499 ALLSCYGKCGEMDDCEKIFAR--MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
           A++  Y  CG +D+    F R  M +R D VSWN++IS    +    +A+     M   G
Sbjct: 467 AVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHG 526

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
              +  T   VL ACA  A L  G+ VH     + +E +V + +AL  MY +CG ++ A 
Sbjct: 527 VAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAR 586

Query: 617 RFFDLMPV-RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
             F+ + V R+V  +N+MI+ Y+++G   +AL LF +M+ +G  PD  +FV VLSACSH 
Sbjct: 587 EIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHG 646

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           GL DEG++ F+SM Q YG+ P  + ++C VD+LGRAG L   EE I  M + P  L+W+T
Sbjct: 647 GLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKT 706

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           +LGAC +   R  + GR A +M+ E++P +   YV+L+N+ A  GKW++ A+ R  M+  
Sbjct: 707 LLGACRKY--RDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESR 764

Query: 796 EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
            ++K+AG SW+ +K  VH FVAGD SHP  + IY +L+ L+ ++R+ GYVP T+  L  +
Sbjct: 765 GLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKV 824

Query: 856 EPESKEDLVSYHSEKIAVAFVLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLR 915
           +   KE L+  HSE++A+A  +  +S   +R+MKNLRVC DCH+A KFISKIV +EIV+R
Sbjct: 825 DEAEKERLLCQHSERLAIALGVMSSSTDTVRVMKNLRVCEDCHNATKFISKIVNKEIVVR 884

Query: 916 DSNRFHHFNDGKCSCGDYW 934
           D++RFHHF DG CSCGDYW
Sbjct: 885 DTHRFHHFVDGSCSCGDYW 903



 Score =  263 bits (671), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 177/624 (28%), Positives = 307/624 (49%), Gaps = 62/624 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H +I+  G   +  L N L+ +Y++   L    ++F  +  R+  SW  I++ YT  
Sbjct: 49  RRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEH 106

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G +  A  MF  M + G   +     +VL+AC   G      G  +H  +++S      +
Sbjct: 107 GQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGD--LSQGRSIHAWIVESGLEGKSV 164

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           ++N+L+ +YGSC      A  +FE +E RDL+SWN+ I+  +Q GD     +LF RMQ E
Sbjct: 165 LANLLLHIYGSC-GCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMALELFQRMQLE 222

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G R    P   T   +IT    SV +     + I ++V+++GL   L V +AL S +ARL
Sbjct: 223 GVR----PARITL--VITL---SVCAKIRQARAIHSIVRESGLEQTLVVSTALASAYARL 273

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLM---------------------EG------------ 271
           G+   A+++F++  +++VVS N ++                     EG            
Sbjct: 274 GHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNAS 333

Query: 272 -----RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                 R G+ +H   +  GL   + +GN L++MY +CG+ +++R +F  + G ++VSWN
Sbjct: 334 TGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWN 392

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS----LGWIMLGQQIHGE 382
           TMI+G  Q G  + A+  F  M+ +G+     + ++ L + AS       +  G+++H  
Sbjct: 393 TMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSR 452

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF---FLMPEHDQVSWNSVIGAFADSEAL 439
            +  G  S+ ++  A++ +YA  G +      F    +   HD VSWN++I + +     
Sbjct: 453 IVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQ-HGH 511

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
              A+ ++  M   G +PN +T + +L A +  +    G  VH  +    + +   +  A
Sbjct: 512 GKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATA 571

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L S YG+CG ++   +IF +++  RD V +N+MI+ Y  N L  +A+ L W M Q G R 
Sbjct: 572 LASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRP 631

Query: 560 DHFTFATVLSACASVATLERGMEV 583
           D  +F +VLSAC+     + G E+
Sbjct: 632 DEQSFVSVLSACSHGGLADEGWEI 655



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 212/485 (43%), Gaps = 70/485 (14%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           + A+  H  + + G    + +   L + Y R+G L  A ++FD   +R+ VSW  ++  Y
Sbjct: 242 RQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAY 301

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G  +EA  +F  M+  G   ++  L +    C     S  +FG  +H   L+     
Sbjct: 302 AQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGC-----SSLRFGRMIHACALEKGLDR 356

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D ++ N L+ MY  C  S + AR +FE I   + +SWN++I+  SQ+G      +LF RM
Sbjct: 357 DIVLGNALLDMYTRC-GSPEEARHLFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRM 414

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ--QILAMVKKAGLLSDLYVGSALVS 239
           Q EG    + P   T+ +L+ A  S+      + +  ++ + +   G  S+  +G+A+V 
Sbjct: 415 QLEG----MAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVK 470

Query: 240 GFARLGNFYYARKIFEQMI---QKNVVSMNGLM-------EGRR---------------- 273
            +A  G    A   F++     + +VVS N ++        G+R                
Sbjct: 471 MYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPN 530

Query: 274 ------------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF- 314
                             +G  VH +L  SG+   V V   L +MY +CG+++ +R +F 
Sbjct: 531 QITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFE 590

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC-----AS 369
           +  + +D V +N MI+   QNG   EA+  F  M+++G      S +S LS+C     A 
Sbjct: 591 KVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLAD 650

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNAL--LSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
            GW +        G+    D      + L      ADA  L RC+ V     +   + W 
Sbjct: 651 EGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDV-----KPTVLVWK 705

Query: 428 SVIGA 432
           +++GA
Sbjct: 706 TLLGA 710


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 275/716 (38%), Positives = 416/716 (58%), Gaps = 15/716 (2%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------RKGKEVH 279
           D    S  VS   + G    A  I   MI +     + +  G            +G+EVH
Sbjct: 60  DTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVH 119

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
             +++SG+     + N L++MYAKCG++ D+R VF  +  ++ VSW  MI          
Sbjct: 120 AAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNL 179

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           EA   +  M+  G      + +S L++  +   + +GQ++H E  K GL+ +  V  +L+
Sbjct: 180 EAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLV 239

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
            +YA  G +S+   +F  +PE + V+W  +I  +A  +  V  A++    M++A  +PN 
Sbjct: 240 GMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYA-QQGQVDVALELLEKMQQAEVAPNK 298

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           +T+ +IL   ++    + G +VH  +I+     E  + NAL++ Y KCG + +  K+F  
Sbjct: 299 ITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGD 358

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           +  R D V+W +M++GY       +A++L   M Q+G + D  TF + L++C+S A L+ 
Sbjct: 359 LPHR-DVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQE 417

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G  +H   V A    DV + SALV MY+KCG +D A   F+ M  RNV +W +MI+G A+
Sbjct: 418 GKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQ 477

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
           HG   +AL  F QMK  G  PD VTF  VLSAC+H GLV+EG KHF+SM   YG+ P +E
Sbjct: 478 HGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVE 537

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            +SC VDLLGRAG L++ E  I  MP  P   +W  +L A CR +    E G +AA  + 
Sbjct: 538 HYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSA-CRIHS-DVERGERAAENVL 595

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           +++P +   YV L+N+YA+ G++ED  K R+ M++ +V KE G SW+ +   VHVF   D
Sbjct: 596 KLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVED 655

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR 879
           +SHPE   IY +L +L +++++ GYVP T+F L D++ E K   +  HSE++A+ + L +
Sbjct: 656 KSHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMK 715

Query: 880 NSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
                PIRI+KNLRVCGDCH+A KFISK+VGREI+ RD++RFHHF DG CSCGD+W
Sbjct: 716 TPPGTPIRIVKNLRVCGDCHTASKFISKVVGREIIARDAHRFHHFVDGVCSCGDFW 771



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 142/556 (25%), Positives = 265/556 (47%), Gaps = 59/556 (10%)

Query: 35  DLASASKLFDEMPDR------NSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYA 88
           +L + +   D++P        ++++ +  VS    +G   EA  +   M+  G  +    
Sbjct: 39  ELTTPTVSHDQLPGNAGFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDV 98

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE 148
              +L+ C        + G +VH  +LKS    +  + N L++MY  C   TD ARR+F+
Sbjct: 99  FRGLLQECARL--RSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTD-ARRVFD 155

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
            I  R+++SW ++I  +      +  +K +  M+  G     KP++ TF SL+ A  +  
Sbjct: 156 GIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAG----CKPDKVTFVSLLNAFTNPE 211

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
           L    + Q++   + KAGL  +  VG++LV  +A+ G+   A+ IF+++ +KNVV+   L
Sbjct: 212 L--LQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLL 269

Query: 269 MEGRRK-----------------------------------------GKEVHGYLIRSGL 287
           + G  +                                         GK+VH Y+I+SG 
Sbjct: 270 IAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGY 329

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
              + V N L+ MY KCG + ++R +F  +  +D V+W  M++G  Q G ++EAI  F  
Sbjct: 330 GREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRR 389

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M++ G+     +  S L+SC+S  ++  G+ IH + +  G   DV + +AL+S+YA  G 
Sbjct: 390 MQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGS 449

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +     VF  M E + V+W ++I   A       EA++Y+  M++ G  P+ VTF ++L+
Sbjct: 450 MDDARLVFNQMSERNVVAWTAMITGCA-QHGRCREALEYFEQMKKQGIKPDKVTFTSVLS 508

Query: 468 AASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           A +   + + G +   +  + Y +       +  +   G+ G +++ E +   M  +   
Sbjct: 509 ACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGP 568

Query: 527 VSWNSMISG-YIHNEL 541
             W +++S   IH+++
Sbjct: 569 SVWGALLSACRIHSDV 584



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 223/470 (47%), Gaps = 56/470 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ILK G   + +L NTL+++Y + G L  A ++FD + DRN VSW  ++  +     +
Sbjct: 119 HAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQN 178

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA K ++ M  AG   ++    S+L A     P   + G +VH  + K+    +  V  
Sbjct: 179 LEAYKCYETMKLAGCKPDKVTFVSLLNAF--TNPELLQVGQKVHMEIAKAGLELEPRVGT 236

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY  C + +  A+ IF+++  +++++W  +I+ Y+Q+G      +L  +MQ+    
Sbjct: 237 SLVGMYAKCGDISK-AQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQA--- 292

Query: 188 YSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
             + PN+ T+ S++    + +    G  + + I+    ++G   +++V +AL++ + + G
Sbjct: 293 -EVAPNKITYTSILQGCTTPLALEHGKKVHRYII----QSGYGREIWVVNALITMYCKCG 347

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEG--------------RR------------------ 273
               ARK+F  +  ++VV+   ++ G              RR                  
Sbjct: 348 GLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALT 407

Query: 274 ---------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                    +GK +H  L+ +G    V + + LV+MYAKCG++DD+R VF  M  ++ V+
Sbjct: 408 SCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVA 467

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IHGEG 383
           W  MI+G  Q+G   EA+  F  M++ G+     +  S LS+C  +G +  G++      
Sbjct: 468 WTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMY 527

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
           L  G+   V   +  + L   AG+L     V   MP     S W +++ A
Sbjct: 528 LDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSA 577



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 153/334 (45%), Gaps = 30/334 (8%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  I++ G+  ++++ N LI +Y + G L  A KLF ++P R+ V+W  +V+GY  
Sbjct: 317 GKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQ 376

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G  +EA  +F+ M + G   ++    S L +C    P+  + G  +H  ++ +  + D 
Sbjct: 377 LGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCS--SPAFLQEGKSIHQQLVHAGYSLDV 434

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            + + L++MY  C  S D AR +F ++  R++++W ++I+  +Q G      + F +M++
Sbjct: 435 YLQSALVSMYAKC-GSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKK 493

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVL--------SGSYLLQQILAMVKKAGLLSDLYVGS 235
           +G    +KP++ TF S+++A     L           YL   I  MV+      DL    
Sbjct: 494 QG----IKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDL---- 545

Query: 236 ALVSGFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAV 293
                  R G+   A  +   M  Q        L+   R   +V  G      +  +   
Sbjct: 546 -----LGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPD 600

Query: 294 GNG----LVNMYAKCGTIDDSRSVFRFMIGKDSV 323
            +G    L N+YA  G  +D+  V + M  +D V
Sbjct: 601 DDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVV 634



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 57/99 (57%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ K  H Q++  G++ DV+L + L+++Y + G +  A  +F++M +RN V+W  +++G 
Sbjct: 416 QEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGC 475

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   EA + F++M + G   ++    SVL AC   G
Sbjct: 476 AQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVG 514


>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 297/828 (35%), Positives = 454/828 (54%), Gaps = 97/828 (11%)

Query: 159 NSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLS-------- 210
           N+ +  +S+RG ++   KL      + F   + P+E+      + AY++ L         
Sbjct: 5   NNFLIRFSRRGFSVQSAKL-----TQEFVGHVSPSEFN-----SHAYANALQDCIQKDEP 54

Query: 211 --GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
             G  L  +IL   K+ G L DL+  + L++ + +      A K+F++M ++N +S   L
Sbjct: 55  SRGKGLHCEIL---KRGGCL-DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTL 110

Query: 269 MEG-----------------RRKGKEVHGYLIRSGLFDMVA------------------- 292
           ++G                  R+G E++ ++  + L  +V+                   
Sbjct: 111 IQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGH 170

Query: 293 -----VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
                VG  L++ Y+ CG +D +R VF  ++ KD VSW  M++   +N C++EA+  F  
Sbjct: 171 ESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQ 230

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           MR  G   +NF+  S   +C  L    +G+ +HG  LK   + D+ V  ALL LY  +G 
Sbjct: 231 MRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGD 290

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +      F  +P+ D + W+ +I  +A S+    EAV+ +  MR+A   PN  TF ++L 
Sbjct: 291 IDDARXAFEEIPKKDVIPWSFMIARYAQSDQ-SKEAVEMFFQMRQALVLPNQFTFASVLQ 349

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
           A ++     LG+Q+H  VIK  + ++  + NAL+  Y KCG M++   +FA    R D  
Sbjct: 350 ACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVT 409

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
            WN++I G++      KA+ L   M++   +    T+++ L ACAS+A LE G+++H+  
Sbjct: 410 PWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLT 469

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
           V+   + D+V+ +AL+DMY+KCG I  A   FDLM  ++  SWN+MISGY+ HG      
Sbjct: 470 VKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHG------ 523

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDL 707
                                  AC++AGL+D+G  +F SM Q +G+ P +E ++CMV L
Sbjct: 524 ----------------------LACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWL 561

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAV 767
           LGR G LDK  + I+++P  P+ ++WR +LGAC   N    ELGR +A  + EMEPQ+  
Sbjct: 562 LGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHN--DIELGRISAQHVLEMEPQDKA 619

Query: 768 NYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDL 827
            +VLL+NMYA+  +W++VA  RK MK   VKKE G SW+  +  VH F  GD SHPE  +
Sbjct: 620 THVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRV 679

Query: 828 IYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRN-SKLPIR 886
           I   L+ L+ K + AGY+P     L D+E E KE L+  HSE++A++F + R  S  PIR
Sbjct: 680 INGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIR 739

Query: 887 IMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           IMKNLR+C DCH+A K ISK+V REIV+RD NRFHHF +G CSCGDYW
Sbjct: 740 IMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 787



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 145/474 (30%), Positives = 233/474 (49%), Gaps = 55/474 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H +ILK G   D+F  N L+N+YV+   L  ASKLFDEMP+RN++S+  ++ GY   
Sbjct: 58  KGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAES 117

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLR--ACQECGPSGFKFGMQVHCLVLKSNQTFD 122
               EA ++F  + R G  LN +   ++L+     +CG    + G  +H  + K     +
Sbjct: 118 VRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCG----ELGWGIHACIFKLGHESN 173

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V   LI  Y  C    D AR +F+ I  +D++SW  +++ +++        KLFS+M+
Sbjct: 174 AFVGTALIDAYSVC-GRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMR 232

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             GF    KPN +TF S+  A     L    + + +     K+    DLYVG AL+  + 
Sbjct: 233 MVGF----KPNNFTFASVFKACLG--LEAFDVGKSVHGCALKSRYELDLYVGVALLDLYT 286

Query: 243 RLGNFYYARKIFEQMIQKNVVSMN------------------------------------ 266
           + G+   AR  FE++ +K+V+  +                                    
Sbjct: 287 KSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFAS 346

Query: 267 -----GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                  MEG   G ++H ++I+ GL   V V N L+++YAKCG +++S  +F     ++
Sbjct: 347 VLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRN 406

Query: 322 SVS-WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
            V+ WNT+I G  Q G  E+A+  F  M    + ++  +  S L +CASL  +  G QIH
Sbjct: 407 DVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIH 466

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
              +K   D D+ V+NAL+ +YA  G +     VF LM + D+VSWN++I  ++
Sbjct: 467 SLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYS 520



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 172/634 (27%), Positives = 297/634 (46%), Gaps = 101/634 (15%)

Query: 61  YTHKGMSNEACKMFKEMV--RAGFLLNRYALGSVLRAC-QECGPSGFKFGMQVHCLVLKS 117
           ++ +G S ++ K+ +E V   +    N +A  + L+ C Q+  PS    G  +HC +LK 
Sbjct: 11  FSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSR---GKGLHCEILKR 67

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
               D    N+L+ MY       D A ++F+E+  R+ IS+ ++I  Y++    +   +L
Sbjct: 68  GGCLDLFAWNILLNMYVKSDFLCD-ASKLFDEMPERNTISFVTLIQGYAESVRFLEAIEL 126

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F R+ REG  + L P  + F +++    S  +    L   I A + K G  S+ +VG+AL
Sbjct: 127 FVRLHREG--HELNP--FVFTTILKLLVS--MDCGELGWGIHACIFKLGHESNAFVGTAL 180

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGL----------------------------- 268
           +  ++  G    AR++F+ ++ K++VS  G+                             
Sbjct: 181 IDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNN 240

Query: 269 ------------MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                       +E    GK VHG  ++S     + VG  L+++Y K G IDD+R  F  
Sbjct: 241 FTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEE 300

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           +  KD + W+ MI+   Q+   +EA+  F  MR+  ++ + F+  S L +CA++  + LG
Sbjct: 301 IPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLG 360

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA--- 432
            QIH   +K+GL SDV VSNAL+ +YA  G +   + +F   P  + V+ WN+VI     
Sbjct: 361 NQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQ 420

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN 492
             D E    +A++ +L+M         VT+ + L A +S +  + G Q+H+  +K     
Sbjct: 421 LGDGE----KALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDK 476

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
           +  + NAL+  Y KCG + D   +F  M+ ++DEVSWN+MISGY  + L           
Sbjct: 477 DIVVTNALIDMYAKCGSIKDARLVFDLMN-KQDEVSWNAMISGYSMHGL----------- 524

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGME-----VHACGVRACLEFDVVIGSALVDMYS 607
                            ACA+   L++G       +   G+  C+E      + +V +  
Sbjct: 525 -----------------ACANAGLLDQGQAYFTSMIQDHGIEPCIEH----YTCMVWLLG 563

Query: 608 KCGRIDYASRFFDLMPVR-NVYSWNSMISGYARH 640
           + G +D A +  D +P + +V  W +++     H
Sbjct: 564 RGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIH 597



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 4/164 (2%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVS-WACIVSGYTHKG 65
            H  ++K G   DVF+ N L++VY + G + ++  LF E P RN V+ W  ++ G+   G
Sbjct: 363 IHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLG 422

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
              +A ++F  M+            S LRAC     +  + G+Q+H L +K+    D +V
Sbjct: 423 DGEKALRLFLNMLEYRVQATEVTYSSALRACASL--AALEPGLQIHSLTVKTTFDKDIVV 480

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
           +N LI MY  C    D AR +F+ +  +D +SWN++IS YS  G
Sbjct: 481 TNALIDMYAKCGSIKD-ARLVFDLMNKQDEVSWNAMISGYSMHG 523



 Score = 46.2 bits (108), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 35/61 (57%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K  F  D+ + N LI++Y + G +  A  +FD M  ++ VSW  ++SGY+  G+
Sbjct: 465 IHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGL 524

Query: 67  S 67
           +
Sbjct: 525 A 525


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 308/920 (33%), Positives = 509/920 (55%), Gaps = 64/920 (6%)

Query: 64  KGMSNEACK----MFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           +G  NEA +    +F     + F L+  A  SVL  C          G QVH  ++ SN 
Sbjct: 89  RGSVNEAFQSLTDLFANQSPSQFSLDE-AYSSVLELCG--SKKALSEGQQVHAHMITSNA 145

Query: 120 TFDGL-VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
            F+ + +S  L+ MYG C    D A ++F+ +  + + +WN++I  Y   G+ +   +L+
Sbjct: 146 LFNSVFLSTRLVFMYGKCGCLVD-AEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELY 204

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
             M+  G    +  +  TF  ++ A    +L       ++  +  K G +S ++V +++V
Sbjct: 205 REMRVSG----IPLDACTFPCILKAC--GLLKDRRCGAEVHGLAIKEGYVSIVFVANSIV 258

Query: 239 SGFARLGNFYYARKIFEQMIQK-NVVSMNGLMEGR------------------------- 272
             + +  +   AR++F++M +K +VVS N ++                            
Sbjct: 259 GMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNT 318

Query: 273 ----------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                           ++G  +H  +++S  +  V V N L+ MYA+ G + ++ ++F  
Sbjct: 319 YTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYN 378

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M   D++SWN+M+SG  QNG Y EA+  +  MR  G      ++IS +++ A  G  + G
Sbjct: 379 MDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNG 438

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
            QIH   +K GLDSD+ V N+L+ +YA    +     +F  MP+ D VSW ++I   A +
Sbjct: 439 MQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQN 498

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
            +  S A++ + +++  G   + +   +IL A S   +     ++H+ +I+  ++ +  +
Sbjct: 499 GSH-SRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVL 556

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
           +N ++  YG+CG +D   ++F  + E +D VSW SMIS Y+HN L  +A+ L   M + G
Sbjct: 557 QNGIVDVYGECGNVDYAARMF-ELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETG 615

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
              D  +  ++LSA AS++ L++G E+H   +R     +  + S LVDMY++CG ++ + 
Sbjct: 616 VEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSR 675

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
             F+ +  +++  W SMI+ Y  HG G  A+ LF +M+ +   PDH+ FV VL ACSH+G
Sbjct: 676 NVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSG 735

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
           L++EG +  +SM   Y L P  E + C+VDLLGRA  L++  +F+  M + P + +W  +
Sbjct: 736 LMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCAL 795

Query: 737 LGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAE 796
           LGA C+ +  K ELG  AA  L EM+P+N  NYVL++N+YA+  +W+DV + R  MK + 
Sbjct: 796 LGA-CQIHSNK-ELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASG 853

Query: 797 VKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM-RDAGYVPQTKFALFDL 855
           +KK  GCSW+ + + VH F+A D+SHP+   IY KL ++ +K+ ++ GYV QTKF L + 
Sbjct: 854 LKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNA 913

Query: 856 EPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
           + E K  ++  HSE++A+A+ +LT      +RI KNLRVCGDCH+  K ISK   RE+V+
Sbjct: 914 KEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVM 973

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RD+NRFHHF  G CSCGD W
Sbjct: 974 RDANRFHHFKGGVCSCGDVW 993



 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 189/682 (27%), Positives = 318/682 (46%), Gaps = 62/682 (9%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           VFL   L+ +Y + G L  A KLFD MP +   +W  ++  Y   G    + ++++EM  
Sbjct: 150 VFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRV 209

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
           +G  L+      +L+AC        + G +VH L +K        V+N ++ MY  C   
Sbjct: 210 SGIPLDACTFPCILKACGLLKDR--RCGAEVHGLAIKEGYVSIVFVANSIVGMYTKC-ND 266

Query: 140 TDCARRIFEEI-ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
            + AR++F+ + E  D++SWNS+IS YS  G +I   +LF  MQ+     SL PN YTF 
Sbjct: 267 LNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKA----SLAPNTYTF- 321

Query: 199 SLITAAYSSVLSGSYLLQQ--ILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
               AA  +    S++ Q   I A V K+    +++V +AL++ +AR G    A  IF  
Sbjct: 322 ---VAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYN 378

Query: 257 MIQKNVVSMNGLMEG-----------------------------------------RRKG 275
           M   + +S N ++ G                                            G
Sbjct: 379 MDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNG 438

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
            ++H Y +++GL   + VGN LV+MYAK  ++     +F  M  KD VSW T+I+G  QN
Sbjct: 439 MQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQN 498

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G +  A+  F  ++ +G+      + S L +C+ L  I   ++IH   ++ GL SD+ + 
Sbjct: 499 GSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQ 557

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           N ++ +Y + G +    ++F L+   D VSW S+I  +  +  L +EA++ +  M+  G 
Sbjct: 558 NGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHN-GLANEALELFHLMKETGV 616

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            P+ ++ ++IL+AA+S S  K G ++H  +I+     E ++ + L+  Y +CG ++    
Sbjct: 617 EPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRN 676

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F      +D V W SMI+ Y  +     A++L   M       DH  F  VL AC+   
Sbjct: 677 VF-NFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSG 735

Query: 576 TLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSM 633
            +  G   + +      LE        LVD+  +   ++ A +F   M V      W ++
Sbjct: 736 LMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCAL 795

Query: 634 ISGYARHGHGDKALTLFSQMKL 655
           +   A   H +K L   +  KL
Sbjct: 796 LG--ACQIHSNKELGEIAAQKL 815



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 171/571 (29%), Positives = 276/571 (48%), Gaps = 58/571 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR-NSVSWACIVSGYTHKGM 66
           H   +K G+   VF+ N+++ +Y +  DL  A +LFD MP++ + VSW  ++S Y+  G 
Sbjct: 239 HGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQ 298

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           S EA ++F EM +A    N Y   + L+AC++   S  K GM +H  VLKS+   +  V+
Sbjct: 299 SIEALRLFGEMQKASLAPNTYTFVAALQACED--SSFIKQGMFIHATVLKSSYYINVFVA 356

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LIAMY    +  + A  IF  ++  D ISWNS++S + Q G      + +  M+  G 
Sbjct: 357 NALIAMYARFGKMGEAA-NIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAG- 414

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLL-QQILAMVKKAGLLSDLYVGSALVSGFARLG 245
               KP+     S+I A   S  SG+ L   QI A   K GL SDL VG++LV  +A+  
Sbjct: 415 ---QKPDLVAVISIIAA---SARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFC 468

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRKG------------------------------ 275
           +  Y   IF++M  K+VVS   ++ G  +                               
Sbjct: 469 SMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILL 528

Query: 276 -----------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                      KE+H Y+IR GL D+V + NG+V++Y +CG +D +  +F  +  KD VS
Sbjct: 529 ACSGLKLISSVKEIHSYIIRKGLSDLV-LQNGIVDVYGECGNVDYAARMFELIEFKDVVS 587

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W +MIS    NG   EA+  F  M+  G+   + SL+S LS+ ASL  +  G++IHG  +
Sbjct: 588 WTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLI 647

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           + G   + S+++ L+ +YA  G L +   VF  +   D V W S+I A+         A+
Sbjct: 648 RKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYG-MHGCGRAAI 706

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLS 502
             +  M     +P+ + F+ +L A S   +   G +   + +KY    E   E+   L+ 
Sbjct: 707 DLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRF-LESMKYEYQLEPWPEHYVCLVD 765

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
             G+   +++  +    M        W +++
Sbjct: 766 LLGRANHLEEAYQFVKGMEVEPTAEVWCALL 796



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 205/420 (48%), Gaps = 55/420 (13%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K     H  +LK  +  +VF+ N LI +Y R G +  A+ +F  M D +++SW  ++SG+
Sbjct: 335 KQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGF 394

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G+ +EA + + EM  AG   +  A+ S++ A    G +    GMQ+H   +K+    
Sbjct: 395 VQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNT--LNGMQIHAYAMKNGLDS 452

Query: 122 DGLVSNVLIAMYGS--CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           D  V N L+ MY     ++  DC   IF+++  +D++SW +II+ ++Q G      +LF 
Sbjct: 453 DLQVGNSLVDMYAKFCSMKYMDC---IFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFR 509

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            +Q EG    +        S++ A     L  S  +++I + + + G LSDL + + +V 
Sbjct: 510 EVQLEGIDLDV----MMISSILLACSGLKLISS--VKEIHSYIIRKG-LSDLVLQNGIVD 562

Query: 240 GFARLGNFYYARKIFEQMIQKNVVS---------MNGLME-------------------- 270
            +   GN  YA ++FE +  K+VVS          NGL                      
Sbjct: 563 VYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSIS 622

Query: 271 ------------GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                         +KGKE+HG+LIR G     ++ + LV+MYA+CGT++ SR+VF F+ 
Sbjct: 623 LVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIR 682

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            KD V W +MI+    +GC   AI  F  M  + +   + + ++ L +C+  G +  G++
Sbjct: 683 NKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRR 742


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 307/920 (33%), Positives = 509/920 (55%), Gaps = 64/920 (6%)

Query: 64  KGMSNEACK----MFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           +G  NEA +    +F     + F L+  A  SVL  C          G QVH  ++ SN 
Sbjct: 53  RGSVNEAFQSLTDLFANQSPSQFSLDE-AYSSVLELCG--SKKALSEGQQVHAHMITSNA 109

Query: 120 TFDGL-VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
            F+ + +S  L+ MYG C    D A ++F+ +  + + +WN++I  Y   G+ +   +L+
Sbjct: 110 LFNSVFLSTRLVFMYGKCGCLVD-AEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELY 168

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
             M+  G    +  +  TF  ++ A    +L       ++  +  K G +S ++V +++V
Sbjct: 169 REMRVSG----IPLDACTFPCILKAC--GLLKDRRYGAEVHGLAIKEGYVSIVFVANSIV 222

Query: 239 SGFARLGNFYYARKIFEQMIQK-NVVSMNGLMEGR------------------------- 272
             + +  +   AR++F++M +K +VVS N ++                            
Sbjct: 223 GMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNT 282

Query: 273 ----------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                           ++G  +H  +++S  +  V V N L+ MYA+ G + ++ ++F  
Sbjct: 283 YTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYN 342

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M   D++SWN+M+SG  QNG Y EA+  +  MR  G      ++IS +++ A  G  + G
Sbjct: 343 MDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHG 402

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
            QIH   +K GLDSD+ V N+L+ +YA    +     +F  MP+ D VSW ++I   A +
Sbjct: 403 MQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQN 462

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
            +  S A++ + +++  G   + +   +IL A S   +     ++H+ +I+  ++ +  +
Sbjct: 463 GSH-SRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVL 520

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
           +N ++  YG+CG +D   ++F  + E +D VSW SMIS Y+HN L  +A+ L   M + G
Sbjct: 521 QNGIVDVYGECGNVDYAARMF-ELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETG 579

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
              D  +  ++LSA AS++ L++G E+H   +R     +  + S LVDMY++CG ++ + 
Sbjct: 580 VEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSR 639

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
             F+ +  +++  W SMI+ Y  HG G  A+ LF +M+ +   PDH+ FV VL ACSH+G
Sbjct: 640 NVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSG 699

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
           L++EG +  +SM   Y L P  E ++C+VDLLGRA  L++  +F+  M + P + +W  +
Sbjct: 700 LMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCAL 759

Query: 737 LGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAE 796
           LGA C+ +  K ELG  AA  L EM+P+N  NYVL++N+Y++  +W+DV   R  MK + 
Sbjct: 760 LGA-CQIHSNK-ELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASG 817

Query: 797 VKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM-RDAGYVPQTKFALFDL 855
           +KK  GCSW+ + + VH F+A D+SHP+   IY KL ++ +K+ ++ GYV QTKF L + 
Sbjct: 818 LKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNA 877

Query: 856 EPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
           + E K  ++  HSE++A+A+ +LT      +RI KNLRVCGDCH+  K ISK   RE+V+
Sbjct: 878 KEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVM 937

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RD+NRFHHF  G CSCGD W
Sbjct: 938 RDANRFHHFKGGVCSCGDVW 957



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 189/682 (27%), Positives = 320/682 (46%), Gaps = 62/682 (9%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           VFL   L+ +Y + G L  A KLFD MP +   +W  ++  Y   G    + ++++EM  
Sbjct: 114 VFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRV 173

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
           +G  L+      +L+AC        ++G +VH L +K        V+N ++ MY  C   
Sbjct: 174 SGIPLDACTFPCILKACGLLKDR--RYGAEVHGLAIKEGYVSIVFVANSIVGMYTKC-ND 230

Query: 140 TDCARRIFEEI-ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
            + AR++F+ + E  D++SWNS+IS YS  G +I   +LF  MQ+     SL PN YTF 
Sbjct: 231 LNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKA----SLAPNTYTF- 285

Query: 199 SLITAAYSSVLSGSYLLQQ--ILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
               AA  +    S++ Q   I A V K+    +++V +AL++ +AR G    A  IF  
Sbjct: 286 ---VAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYN 342

Query: 257 MIQKNVVSMNGLMEG-----------------------------------------RRKG 275
           M   + +S N ++ G                                            G
Sbjct: 343 MDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHG 402

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
            ++H Y +++GL   + VGN LV+MYAK  ++     +F  M  KD VSW T+I+G  QN
Sbjct: 403 MQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQN 462

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G +  A+  F  ++ +G+      + S L +C+ L  I   ++IH   ++ GL SD+ + 
Sbjct: 463 GSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQ 521

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           N ++ +Y + G +    ++F L+   D VSW S+I  +  +  L +EA++ +  M+  G 
Sbjct: 522 NGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHN-GLANEALELFHLMKETGV 580

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            P+ ++ ++IL+AA+S S  K G ++H  +I+     E ++ + L+  Y +CG ++    
Sbjct: 581 EPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRN 640

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F      +D V W SMI+ Y  +     A++L   M       DH  F  VL AC+   
Sbjct: 641 VF-NFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSG 699

Query: 576 TLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSM 633
            +  G   + +      LE      + LVD+  +   ++ A +F   M V      W ++
Sbjct: 700 LMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCAL 759

Query: 634 ISGYARHGHGDKALTLFSQMKL 655
           +   A   H +K L   +  KL
Sbjct: 760 LG--ACQIHSNKELGEIAAQKL 779



 Score =  222 bits (566), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 171/571 (29%), Positives = 276/571 (48%), Gaps = 58/571 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR-NSVSWACIVSGYTHKGM 66
           H   +K G+   VF+ N+++ +Y +  DL  A +LFD MP++ + VSW  ++S Y+  G 
Sbjct: 203 HGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQ 262

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           S EA ++F EM +A    N Y   + L+AC++   S  K GM +H  VLKS+   +  V+
Sbjct: 263 SIEALRLFGEMQKASLAPNTYTFVAALQACED--SSFIKQGMFIHATVLKSSYYINVFVA 320

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LIAMY    +  + A  IF  ++  D ISWNS++S + Q G      + +  M+  G 
Sbjct: 321 NALIAMYARFGKMGEAA-NIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAG- 378

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLL-QQILAMVKKAGLLSDLYVGSALVSGFARLG 245
               KP+     S+I A   S  SG+ L   QI A   K GL SDL VG++LV  +A+  
Sbjct: 379 ---QKPDLVAVISIIAA---SARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFC 432

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRKG------------------------------ 275
           +  Y   IF++M  K+VVS   ++ G  +                               
Sbjct: 433 SMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILL 492

Query: 276 -----------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                      KE+H Y+IR GL D+V + NG+V++Y +CG +D +  +F  +  KD VS
Sbjct: 493 ACSGLKLISSVKEIHSYIIRKGLSDLV-LQNGIVDVYGECGNVDYAARMFELIEFKDVVS 551

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W +MIS    NG   EA+  F  M+  G+   + SL+S LS+ ASL  +  G++IHG  +
Sbjct: 552 WTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLI 611

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           + G   + S+++ L+ +YA  G L +   VF  +   D V W S+I A+         A+
Sbjct: 612 RKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYG-MHGCGRAAI 670

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLS 502
             +  M     +P+ + F+ +L A S   +   G +   + +KY    E   E+   L+ 
Sbjct: 671 DLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRF-LESMKYEYQLEPWPEHYACLVD 729

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
             G+   +++  +    M        W +++
Sbjct: 730 LLGRANHLEEAYQFVKGMEVEPTAEVWCALL 760



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 205/420 (48%), Gaps = 55/420 (13%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K     H  +LK  +  +VF+ N LI +Y R G +  A+ +F  M D +++SW  ++SG+
Sbjct: 299 KQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGF 358

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G+ +EA + + EM  AG   +  A+ S++ A    G +    GMQ+H   +K+    
Sbjct: 359 VQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNT--LHGMQIHAYAMKNGLDS 416

Query: 122 DGLVSNVLIAMYGS--CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           D  V N L+ MY     ++  DC   IF+++  +D++SW +II+ ++Q G      +LF 
Sbjct: 417 DLQVGNSLVDMYAKFCSMKYMDC---IFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFR 473

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            +Q EG    +        S++ A     L  S  +++I + + + G LSDL + + +V 
Sbjct: 474 EVQLEGIDLDV----MMISSILLACSGLKLISS--VKEIHSYIIRKG-LSDLVLQNGIVD 526

Query: 240 GFARLGNFYYARKIFEQMIQKNVVS---------MNGLME-------------------- 270
            +   GN  YA ++FE +  K+VVS          NGL                      
Sbjct: 527 VYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSIS 586

Query: 271 ------------GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                         +KGKE+HG+LIR G     ++ + LV+MYA+CGT++ SR+VF F+ 
Sbjct: 587 LVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIR 646

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            KD V W +MI+    +GC   AI  F  M  + +   + + ++ L +C+  G +  G++
Sbjct: 647 NKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRR 706


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 308/920 (33%), Positives = 504/920 (54%), Gaps = 55/920 (5%)

Query: 58  VSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
           +SG+   G   E+ + F EM   G   +  A+ S++ AC+       + G+QVH  ++K 
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIE-GVQVHGFIVKV 59

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
               D  V   L+ +YG+   + D A ++F+E+  ++++SW +++  Y   G+   V  +
Sbjct: 60  GLLSDVFVGTSLVHLYGNYGLAAD-AMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNI 118

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           + RM+ EG    +  N+ T  S+I+   S  L    L  Q+L  V K GL +++ V ++L
Sbjct: 119 YRRMRSEG----MSCNDNTMSSVISTCVS--LENELLGYQVLGHVIKYGLETNVSVANSL 172

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMN------------------------------- 266
           +S F   G+   A  +F  M + + +S N                               
Sbjct: 173 ISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINS 232

Query: 267 ----------GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                     G ++  + G+ +H  +++ G    V   N L+ MY+  G  +D+  VF+ 
Sbjct: 233 TTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQG 292

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M+ KD +SWN+M++   Q+G   +A+     M      ++  +  S L++C+   +   G
Sbjct: 293 MVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEG 352

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           + +H   + +GL  +V V NAL++LYA +G +    KVF  MP+ D V+WN++IG  ADS
Sbjct: 353 KILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADS 412

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAA-SSFSMGKLGHQVHAQVIKYNVANETT 495
           E    EA+K +  MR  G   N +T  N+L A  +   + + G  +HA +I     ++  
Sbjct: 413 EE-PDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEY 471

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           ++N+L++ Y KCG+++    IF R++ +      N+M++   H+  + +A+  +  M + 
Sbjct: 472 VQNSLITMYAKCGDLNSSNNIFDRLTSKNASAW-NAMMAANAHHGHMEEALKFLLEMRRA 530

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G  +D F+F+  L+A A +A LE G ++H   V+   + +  + SA +DMY KCG ID  
Sbjct: 531 GVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDV 590

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
            R       R+  SWN + S ++RHG  +KA   F +M   G  PDHVTFV +LSACSH 
Sbjct: 591 LRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHG 650

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           G+V+EG  ++ SM + +G+  ++    C++DLLGR+G   + E FI +MP++P   +WR+
Sbjct: 651 GMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRS 710

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           +L AC        ELGRKA   L +++P +   YVL +N+ A+ GKWEDV K R+ M   
Sbjct: 711 LLAAC--KTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLN 768

Query: 796 EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
           ++KK+  CSWV +K+ + +F  GD SHP+   IY KL+EL + +++AGY+P   +AL D 
Sbjct: 769 KIKKKPACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEELKKMIKEAGYIPDISYALQDT 828

Query: 856 EPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
           + E KE  +  HSE++A+A+ L  + +   ++I KNLRVCGDCHS +KF S I+GR+IVL
Sbjct: 829 DEEQKEHNLWNHSERLALAYGLISSPEGSTLKIFKNLRVCGDCHSVYKFASGILGRKIVL 888

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RD  RFH F+ G+CSC DYW
Sbjct: 889 RDPYRFHQFSGGQCSCTDYW 908



 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 198/719 (27%), Positives = 334/719 (46%), Gaps = 68/719 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  I+K G   DVF+  +L+++Y   G  A A K+F EM  +N VSW  ++  Y   G  
Sbjct: 53  HGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEP 112

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           +    +++ M   G   N   + SV+  C          G QV   V+K     +  V+N
Sbjct: 113 SMVMNIYRRMRSEGMSCNDNTMSSVISTCVSL--ENELLGYQVLGHVIKYGLETNVSVAN 170

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI+M+G    S + A  +F  ++  D ISWNS+I+ Y + G      + FS M    FR
Sbjct: 171 SLISMFGY-FGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWM----FR 225

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
              + N  T  +++    S  +      + I ++V K G  S++   + L++ ++  G  
Sbjct: 226 VHKEINSTTLSTMLAGCGS--VDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRC 283

Query: 248 YYARKIFEQMIQKNVVSMNGLM-------------------------------------- 269
             A  +F+ M++K+++S N +M                                      
Sbjct: 284 EDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAAC 343

Query: 270 ---EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
              E   +GK +H  +I  GL + V VGN LV +YAK G + +++ VF+ M  +D V+WN
Sbjct: 344 SDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWN 403

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC-ASLGWIMLGQQIHGEGLK 385
            +I G   +   +EA+  F  MR +G+  +  ++ + L +C A    +  G  IH   + 
Sbjct: 404 ALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIIL 463

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G  SD  V N+L+++YA  G L+    +F  +   +  S  + + A       + EA+K
Sbjct: 464 TGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKN-ASAWNAMMAANAHHGHMEEALK 522

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
           + L+MRRAG + +  +F   LAAA+  ++ + G Q+H   +K    +   + +A +  YG
Sbjct: 523 FLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYG 582

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           KCGE+DD  +I  R    R  +SWN + S +  +    KA      M+  G + DH TF 
Sbjct: 583 KCGEIDDVLRIIPR-PINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFV 641

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVV--IGS--ALVDMYSKCGRIDYASRFFDL 621
           ++LSAC+    +E G+  +   ++   EF +   IG    ++D+  + GR   A  F   
Sbjct: 642 SLLSACSHGGMVEEGLAYYDSMIK---EFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKE 698

Query: 622 MPVRNV-YSWNSMISGYARHGH---GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
           MPV    + W S+++    HG+   G KA+   + +KLD    D   +V   + C+  G
Sbjct: 699 MPVSPTDHVWRSLLAACKTHGNLELGRKAVE--NLLKLDP--SDDSAYVLYSNICATTG 753



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 156/356 (43%), Gaps = 43/356 (12%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           + + K+ H  ++  G   +V + N L+ +Y + G +  A K+F  MP R+ V+W  ++ G
Sbjct: 349 ATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGG 408

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSG-FKFGMQVHCLVLKSNQ 119
           +      +EA K FK M   G  +N   + +VL AC    P+   + GM +H  ++ +  
Sbjct: 409 HADSEEPDEALKAFKLMREEGVPINYITISNVLGAC--LAPNDLLEHGMPIHAFIILTGF 466

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D  V N LI MY  C +  + +  IF+ + +++  +WN++++  +  G      K   
Sbjct: 467 QSDEYVQNSLITMYAKCGD-LNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLL 525

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            M+R G    +  +E++F   + AA    +      QQ+  +  K G  S+ +V SA + 
Sbjct: 526 EMRRAG----VNVDEFSFSECLAAAAKLAILEEG--QQLHGLAVKLGCDSNPFVASATMD 579

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVN 299
            + + G      +I  + I ++ +S                              N L +
Sbjct: 580 MYGKCGEIDDVLRIIPRPINRSRLSW-----------------------------NILTS 610

Query: 300 MYAKCGTIDDSRSVFRFMIG----KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
            +++ G  + ++  F  MI      D V++ +++S     G  EE +  + +M ++
Sbjct: 611 SFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKE 666


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 299/872 (34%), Positives = 469/872 (53%), Gaps = 64/872 (7%)

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE-TRDLISWNSIISVYSQR 168
           VH L++ S  +   + S  LI+ Y    +       +F  I  T ++  WNSII   +  
Sbjct: 41  VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVS-VFRSISPTNNVYLWNSIIRALTHN 99

Query: 169 GDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLS---GSYLLQQILAMVKKA 225
           G        ++ M+ +     L+P+ +TF S+I +  + +L    G  + +  + M    
Sbjct: 100 GLFTQALGYYTEMREK----KLQPDAFTFPSVINSC-ARILDLELGCIVHEHAMEM---- 150

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------- 272
           G  SDLY+G+AL+  ++R  +   AR +FE+M  ++ VS N L+ G              
Sbjct: 151 GFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMY 210

Query: 273 ----------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
                                       ++G  VHG + + G+   V +GNGL++MY K 
Sbjct: 211 HKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKF 270

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
             + ++R VF  M  KDSV+WNTMI G  Q G +E ++  F  M  DG +    S+ ST+
Sbjct: 271 ERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTI 329

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +C   G + +G+ +H   +  G + D    N L+ +YA  G L    +VF      D V
Sbjct: 330 RACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSV 389

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           +WNS+I  +  S     E ++ +  M +    P+ VTF+ +L+  S  +    G  +H  
Sbjct: 390 TWNSLINGYTQS-GYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCD 447

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
           VIK+    E  I N+LL  Y KCGEMDD  K+F+ MS   D +SWN++I+  +H +    
Sbjct: 448 VIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH-DIISWNTVIASSVHFDDCTV 506

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
              ++  M   G   D  T   +L  C+ +A   +G E+H    ++  E +V IG+AL++
Sbjct: 507 GFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIE 566

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
           MYSKCG ++   + F  M  ++V +W ++IS +  +G G KAL  F  M+L G LPD V 
Sbjct: 567 MYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVA 626

Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           F+  + ACSH+G+V EG + F  M   Y L P++E ++C+VDLL R+G L + EEFI  M
Sbjct: 627 FIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSM 686

Query: 725 PITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           P+ P++ +W  +L AC  R N   T + ++ +  + E+   +   YVL++N+YA+ GKW+
Sbjct: 687 PMKPDASLWGALLSACRARGN---TNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWD 743

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
            V   R +MK   +KKE G SW+ ++  V+VF  GD+S  + D + + L+ L + M   G
Sbjct: 744 QVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEG 803

Query: 844 YVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFK 902
           YV   +FAL D+E + K D++  HSE++A+AF +L      P+ +MKNLRVCGDCH+  K
Sbjct: 804 YVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTK 863

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +I+KI+ REI++RD+NRFH F DG CSCGD+W
Sbjct: 864 YITKIMQREILVRDANRFHRFKDGACSCGDHW 895



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 160/576 (27%), Positives = 276/576 (47%), Gaps = 62/576 (10%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           + H   ++ GF  D+++ N LI++Y R  DL +A  +F+EM +R+SVSW  ++SGY   G
Sbjct: 142 IVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNG 201

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
              +A  M+ +    G + + + + SVL AC        K G+ VH ++ K     D ++
Sbjct: 202 FWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSL--MAVKEGVAVHGVIEKIGIAGDVII 259

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
            N L++MY    E    ARR+F ++  +D ++WN++I  Y+Q G   +  KLF  M  +G
Sbjct: 260 GNGLLSMYFK-FERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DG 317

Query: 186 FRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           F     P+  +  S I A   S  +  G ++ + ++     +G   D    + L+  +A+
Sbjct: 318 F----VPDMLSITSTIRACGQSGDLQVGKFVHKYLIG----SGFECDTVACNILIDMYAK 369

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG-------------------RRK---------- 274
            G+   A+++F+    K+ V+ N L+ G                    RK          
Sbjct: 370 CGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFVLLL 429

Query: 275 -----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      G+ +H  +I+ G    + +GN L+++YAKCG +DD   VF +M   D +
Sbjct: 430 SIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDII 489

Query: 324 SWNTMISGLDQNGCYEEAIMNF---CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           SWNT+I+    +  +++  + F     MR +GLM    +++  L  C+ L     G++IH
Sbjct: 490 SWNTVIA---SSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIH 546

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
           G   K G +S+V + NAL+ +Y+  G L  C+KVF  M E D V+W ++I AF       
Sbjct: 547 GYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFG-MYGEG 605

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-IKYNVANETTIENA 499
            +A+K + DM  +G  P+ V FI  + A S   M K G +   ++   YN+         
Sbjct: 606 KKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYAC 665

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           ++    + G +   E+    M  + D   W +++S 
Sbjct: 666 VVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSA 701



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 233/466 (50%), Gaps = 9/466 (1%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS-WNTMISGLDQ 334
           + VH  +I SGL   V     L++ YA+      S SVFR +   ++V  WN++I  L  
Sbjct: 39  RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTH 98

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG + +A+  +  MR   L    F+  S ++SCA +  + LG  +H   +++G +SD+ +
Sbjct: 99  NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            NAL+ +Y+    L     VF  M   D VSWNS+I  +  S     +A+  Y   R  G
Sbjct: 159 GNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYC-SNGFWEDALDMYHKFRMTG 217

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             P+  T  ++L A  S    K G  VH  + K  +A +  I N LLS Y K   + +  
Sbjct: 218 MVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREAR 277

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM-MQRGQRLDHFTFATVLSACAS 573
           ++F++M+  +D V+WN+MI GY   +L     ++  FM M  G   D  +  + + AC  
Sbjct: 278 RVFSKMA-VKDSVTWNTMICGYA--QLGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQ 334

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
              L+ G  VH   + +  E D V  + L+DMY+KCG +  A   FD    ++  +WNS+
Sbjct: 335 SGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSL 394

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I+GY + G+  + L  F  MK++   PD VTFV +LS  S    +++G +        +G
Sbjct: 395 INGYTQSGYYKEGLESFKMMKMERK-PDSVTFVLLLSIFSQLADINQG-RGIHCDVIKFG 452

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
              +L   + ++D+  + GE+D + +  + M    + + W TV+ +
Sbjct: 453 FEAELIIGNSLLDVYAKCGEMDDLLKVFSYMS-AHDIISWNTVIAS 497



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 229/477 (48%), Gaps = 60/477 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K+    H  I K G A DV + N L+++Y +   L  A ++F +M  ++SV+W  ++ GY
Sbjct: 239 KEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGY 298

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G    + K+F +M+  GF+ +  ++ S +RAC + G    + G  VH  ++ S    
Sbjct: 299 AQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSG--DLQVGKFVHKYLIGSGFEC 355

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG---DTISVFKLF 178
           D +  N+LI MY  C +    A+ +F+  + +D ++WNS+I+ Y+Q G   + +  FK+ 
Sbjct: 356 DTVACNILIDMYAKCGDLL-AAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMM 414

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
            +M+R       KP+  TF  L++    S L+     + I   V K G  ++L +G++L+
Sbjct: 415 -KMER-------KPDSVTFVLLLSIF--SQLADINQGRGIHCDVIKFGFEAELIIGNSLL 464

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMN-------------------------GLMEG-- 271
             +A+ G      K+F  M   +++S N                         GLM    
Sbjct: 465 DVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEA 524

Query: 272 --------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                         RR+GKE+HGY+ +SG    V +GN L+ MY+KCG++++   VF++M
Sbjct: 525 TVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYM 584

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             KD V+W  +IS     G  ++A+  F  M   G++  + + I+ + +C+  G +  G 
Sbjct: 585 KEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGL 644

Query: 378 QIHGE-GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           +          L+  +     ++ L A +G L++  +    MP + D   W +++ A
Sbjct: 645 RFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSA 701


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 274/680 (40%), Positives = 407/680 (59%), Gaps = 38/680 (5%)

Query: 272 RRKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
           R  G  V G+++++G +   V+VG  L++M+A+ G +  ++ VF  +I + SV W  +I+
Sbjct: 160 RLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLIT 219

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
              Q GC  + +  F  M  DG     +S+ S +S+C  LG + LGQQ+H   L+LGL S
Sbjct: 220 RYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVS 279

Query: 391 DVSVSNALLSLYADAGY---LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
           D  VS  L+ +YA       +    KVF  MP H+ +SW ++I  +  S    +  +  +
Sbjct: 280 DSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALF 339

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
            +M      PN +T+ N+L A ++ S    G Q+HA V+K ++A+   + NAL+S Y + 
Sbjct: 340 REMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAES 399

Query: 508 GEMDDCEKIFARMSE------------RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           G M++  K F ++ E             R+  S +S I G                 M  
Sbjct: 400 GCMEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEG-----------------MDD 442

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G  +  FTFA++LSA ASV  L +G ++HA  ++A    D  I ++LV MY++CG ++ A
Sbjct: 443 G--VSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDA 500

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
            R FD M   NV SW S+ISG A+HG+  +AL++F  M L G  P+ VT++ VLSACSH 
Sbjct: 501 CRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHV 560

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           GLV EG +HF+SM + +GL+P++E ++C+VDLL R+G +++  +FIN+MP   ++L+W+T
Sbjct: 561 GLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKT 620

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           +L AC       TE+G  AAN +  +EP++   YVLL+N+YA  G W++VA+ R  M++ 
Sbjct: 621 LLSAC--RTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDK 678

Query: 796 EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
            + KE G SW+ + + +H F AGD SHP    IY KL  L ++++D GYVP T   L D+
Sbjct: 679 NLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGYVPDTSIVLHDM 738

Query: 856 EPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
             E KE  +  HSEKIAVAF ++T ++  P+RI KNLRVC DCHSA K+ISK  GREI+L
Sbjct: 739 SEELKEQYLLQHSEKIAVAFGLITTSATKPMRIFKNLRVCADCHSAIKYISKSTGREIIL 798

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RDSNRFH   DG CSCG+YW
Sbjct: 799 RDSNRFHRMKDGICSCGEYW 818



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 233/464 (50%), Gaps = 51/464 (10%)

Query: 11  ILKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           +LK GF   DV +   LI+++ R GDL +A ++FD + +R SV W  +++ Y   G +++
Sbjct: 170 VLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASK 229

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
             ++F  M+  GF  + Y++ S++ AC E G    + G Q+H + L+     D  VS  L
Sbjct: 230 VVELFLHMLDDGFEPDGYSMSSMISACTELG--SVRLGQQLHSVALRLGLVSDSCVSCGL 287

Query: 130 IAMYGSCL--ESTDCARRIFEEIETRDLISWNSIISVYSQRG-DTISVFKLFSRMQREGF 186
           + MY       S + AR++F+ +   +++SW ++IS Y Q G    +V  LF    RE  
Sbjct: 288 VDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALF----REML 343

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
             S++PN  T+ +L+ A  +  LS     +QI A V K  +     VG+ALVS +A  G 
Sbjct: 344 NESIRPNHITYSNLLKACAN--LSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGC 401

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRR--------------------------------- 273
              ARK F+Q+ + N++SM+  +E  R                                 
Sbjct: 402 MEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGMDDGVSTFTFASLLSAAASVGL 461

Query: 274 --KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
             KG+++H   +++G      + N LV+MYA+CG ++D+   F  M   + +SW ++ISG
Sbjct: 462 LTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISG 521

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL--GLD 389
           L ++G  ++A+  F  M   G+  ++ + I+ LS+C+ +G +  G++ H   ++   GL 
Sbjct: 522 LAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKE-HFRSMQKDHGLL 580

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
             +     ++ L A +G +    +    MP + D + W +++ A
Sbjct: 581 PRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSA 624



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 185/711 (26%), Positives = 312/711 (43%), Gaps = 123/711 (17%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPD-RNSVSWACIVSGYTHKGMSNEACKMFKEM 77
           D  + N+L+ +Y + G + +A ++FD+M   R+ VSW  + S     G   E+ ++  EM
Sbjct: 75  DAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEM 134

Query: 78  VRAGFLLNRYALGSVLRAC--QECGPSGFKF-GMQVHCLVLKSN-QTFDGLVSNVLIAMY 133
           +  G   N + L +  RAC  QE     F+  G  V   VLK+     D  V   LI M+
Sbjct: 135 LELGLRPNAFTLCAAARACFPQEL----FRLAGGVVLGFVLKTGFWGTDVSVGCALIDMF 190

Query: 134 GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPN 193
               +    A+R+F+ +  R  + W  +I+ Y Q G    V +LF  M  +GF    +P+
Sbjct: 191 ARNGDLV-AAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGF----EPD 245

Query: 194 EYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG---NFYYA 250
            Y+  S+I+A   + L    L QQ+ ++  + GL+SD  V   LV  +A+L    +  +A
Sbjct: 246 GYSMSSMISAC--TELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHA 303

Query: 251 RKIFEQMIQKNVVSMNGLMEG--------------------------------------- 271
           RK+F+ M + NV+S   L+ G                                       
Sbjct: 304 RKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACAN 363

Query: 272 ---RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
              +  G+++H +++++ +  +  VGN LV+MYA+ G ++++R  F  +   + +S +  
Sbjct: 364 LSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPD 423

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           +     N      I        DG+  S F+  S LS+ AS+G +  GQ++H   +K G 
Sbjct: 424 VETERNNASCSSKIEGM----DDGV--STFTFASLLSAAASVGLLTKGQKLHALSMKAGF 477

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
            SD  +SN+L+S+YA  GYL    + F  M +H+ +SW S+I   A       +A+  + 
Sbjct: 478 RSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLA-KHGYAKQALSMFH 536

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGK 506
           DM  AG  PN VT+I +L+A S   + K G + H + ++ +      +E+   ++    +
Sbjct: 537 DMILAGVKPNDVTYIAVLSACSHVGLVKEGKE-HFRSMQKDHGLLPRMEHYACIVDLLAR 595

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
            G +++  +                       NE+  KA  LVW               T
Sbjct: 596 SGLVEEARQFI---------------------NEMPCKADALVW--------------KT 620

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           +LSAC +    E G E+ A  V      D      L ++Y+  G  D  +R   LM  +N
Sbjct: 621 LLSACRTYGNTEIG-EIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKN 679

Query: 627 V-----YSWNSMISGYARHGHGD-----------KALTLFSQMKLDGPLPD 661
           +      SW  + +       GD           K +TL  ++K  G +PD
Sbjct: 680 LSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGYVPD 730



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 168/645 (26%), Positives = 299/645 (46%), Gaps = 101/645 (15%)

Query: 104 FKFGMQVHCLVLKSN-QTFDGLVSNVLIAMYGSCLESTDCARRIFEEI-ETRDLISWNSI 161
            + G  +H  +L+S     D +V+N L+ MY  C  + + ARR+F+++   RDL+SW ++
Sbjct: 56  LRLGRALHRRLLRSEILDTDAVVANSLLTMYSKC-GAVEAARRVFDQMCGVRDLVSWTAM 114

Query: 162 ISVYSQRGDTISVFKLFSRMQREGFR-------YSLKPNEYTFGSLITAAYSSV---LSG 211
            S  ++ G            +RE  R         L+PN +T  +   A +      L+G
Sbjct: 115 ASCLARNG-----------AERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAG 163

Query: 212 SYLLQQILAMVKKAGLL-SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV------- 263
                 +L  V K G   +D+ VG AL+  FAR G+   A+++F+ +I++  V       
Sbjct: 164 GV----VLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLIT 219

Query: 264 ----------------------------SMNGLMEG------RRKGKEVHGYLIRSGLFD 289
                                       SM+ ++         R G+++H   +R GL  
Sbjct: 220 RYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVS 279

Query: 290 MVAVGNGLVNMYAKCG---TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN-F 345
              V  GLV+MYAK     +++ +R VF+ M   + +SW  +ISG  Q+G  E  +M  F
Sbjct: 280 DSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALF 339

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             M  + +  ++ +  + L +CA+L     G+QIH   LK  +     V NAL+S+YA++
Sbjct: 340 REMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAES 399

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA-VKYYLDMRRAGWSPNGVTFIN 464
           G +    K F      DQ+   +++    D E   + A     ++    G S    TF +
Sbjct: 400 GCMEEARKAF------DQLYETNILSMSPDVETERNNASCSSKIEGMDDGVST--FTFAS 451

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           +L+AA+S  +   G ++HA  +K    ++  I N+L+S Y +CG ++D  + F  M +  
Sbjct: 452 LLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKD-H 510

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
           + +SW S+ISG   +    +A+++   M+  G + +  T+  VLSAC+ V  ++ G E  
Sbjct: 511 NVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHF 570

Query: 585 AC-----GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYA 638
                  G+   +E    I    VD+ ++ G ++ A +F + MP + +   W +++S   
Sbjct: 571 RSMQKDHGLLPRMEHYACI----VDLLARSGLVEEARQFINEMPCKADALVWKTLLSACR 626

Query: 639 RHGH---GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
            +G+   G+ A      ++   P P    +V + +  + AGL DE
Sbjct: 627 TYGNTEIGEIAANHVINLEPRDPAP----YVLLSNLYADAGLWDE 667



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 163/326 (50%), Gaps = 10/326 (3%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLG-LDSDVSVSNALLSLYADAGYLSRCLKVFFLM-PEH 421
           L+S A  G + LG+ +H   L+   LD+D  V+N+LL++Y+  G +    +VF  M    
Sbjct: 47  LTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVR 106

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL-GHQ 480
           D VSW ++    A + A   E+++   +M   G  PN  T      A     + +L G  
Sbjct: 107 DLVSWTAMASCLARNGA-ERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGV 165

Query: 481 VHAQVIKYNV-ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           V   V+K      + ++  AL+  + + G++   +++F  + E R  V W  +I+ Y+  
Sbjct: 166 VLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIE-RTSVVWTLLITRYVQA 224

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
               K + L   M+  G   D ++ ++++SAC  + ++  G ++H+  +R  L  D  + 
Sbjct: 225 GCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVS 284

Query: 600 SALVDMYSKCG---RIDYASRFFDLMPVRNVYSWNSMISGYARHG-HGDKALTLFSQMKL 655
             LVDMY+K      +++A + F  MP  NV SW ++ISGY + G   +  + LF +M  
Sbjct: 285 CGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLN 344

Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEG 681
           +   P+H+T+  +L AC++    D G
Sbjct: 345 ESIRPNHITYSNLLKACANLSDQDSG 370



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 171/408 (41%), Gaps = 61/408 (14%)

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVAN-ETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           +L +A+     +LG  +H ++++  + + +  + N+LL+ Y KCG ++   ++F +M   
Sbjct: 46  LLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGV 105

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC--ASVATLERGM 581
           RD VSW +M S    N    +++ L+  M++ G R + FT      AC    +  L  G+
Sbjct: 106 RDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGV 165

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
            +           DV +G AL+DM+++ G +  A R FD +  R    W  +I+ Y + G
Sbjct: 166 VLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAG 225

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
              K + LF  M  DG  PD  +   ++SAC+  G V  G +   S++   GL+      
Sbjct: 226 CASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLG-QQLHSVALRLGLVSD-SCV 283

Query: 702 SC-MVDLLGRAG---ELDKIEEFINKMP-------------------------------- 725
           SC +VD+  +      ++   +    MP                                
Sbjct: 284 SCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREML 343

Query: 726 ---ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV--LLANMYASGG 780
              I PN + +  +L AC  AN    + GR+    + +    + VN V   L +MYA  G
Sbjct: 344 NESIRPNHITYSNLLKAC--ANLSDQDSGRQIHAHVLKTSIAH-VNVVGNALVSMYAESG 400

Query: 781 KWEDVAKARKAMKEAEV----------KKEAGCSWVT--MKDGVHVFV 816
             E+  KA   + E  +          +  A CS     M DGV  F 
Sbjct: 401 CMEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGMDDGVSTFT 448



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 150/342 (43%), Gaps = 21/342 (6%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H  +LK   A+   + N L+++Y   G +  A K FD++ + N +S    +S     
Sbjct: 371 RQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILS----MSPDVET 426

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
             +N +C    E +  G  ++ +   S+L A    G      G ++H L +K+    D  
Sbjct: 427 ERNNASCSSKIEGMDDG--VSTFTFASLLSAAASVGL--LTKGQKLHALSMKAGFRSDQG 482

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           +SN L++MY  C    D A R F+E++  ++ISW SIIS  ++ G       +F  M   
Sbjct: 483 ISNSLVSMYARCGYLED-ACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILA 541

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G    +KPN+ T+ ++++A  S V       +   +M K  GLL  +   + +V   AR 
Sbjct: 542 G----VKPNDVTYIAVLSAC-SHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARS 596

Query: 245 GNFYYARKIFEQMIQK--NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG----LV 298
           G    AR+   +M  K   +V    L   R  G    G +  + + ++          L 
Sbjct: 597 GLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLS 656

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
           N+YA  G  D+   +   M  K+ +S  T +S +D      E
Sbjct: 657 NLYADAGLWDEVARIRSLMRDKN-LSKETGLSWMDVGNTIHE 697


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 302/859 (35%), Positives = 470/859 (54%), Gaps = 68/859 (7%)

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           + N L+ +Y  C ES      +F  +E RD  SW +II+ Y++ G       +F RMQ+E
Sbjct: 64  LGNHLLRLYLKC-ESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQE 122

Query: 185 GFRYSLKPNEYTFGSLITAA----------------YSSVLSGSYLLQQIL--------- 219
           G R     +  TF +++ A                   S L G  +L  +L         
Sbjct: 123 GVRC----DAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGC 178

Query: 220 ---AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---- 272
              AM+    +  DL   +A ++  A+ G+   A ++F++M       + G+   R    
Sbjct: 179 VASAMLLFEKMERDLVSWNAAIAANAQSGDLGIALELFQRM------QLEGVRPARITLV 232

Query: 273 ---------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                    R+ + +H  +  SGL   + V   L + YA+ G +  ++ VF     +D V
Sbjct: 233 IALTVCATIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVV 292

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SWN M+    Q+G   EA + F  M  +G+  S  +L++  + C+SL     G+ IHG  
Sbjct: 293 SWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSL---RFGRMIHGCA 349

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           L+ GLD D+ + NALL +Y   G       +F  +P  + VSWN++I A +  +  +  A
Sbjct: 350 LEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIP-CNAVSWNTMI-AGSSQKGQMKRA 407

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASS-----FSMGKLGHQVHAQVIKYNVANETTIEN 498
           V+ +  M+  G +P   T++N+L A +S      +M + G ++H++++    A+E  I  
Sbjct: 408 VELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAE-GRKLHSRIVSCGYASEPAIGT 466

Query: 499 ALLSCYGKCGEMDDCEKIFAR--MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
           A++  Y  CG +D+    F R  M +R D VSWN++IS    +    +A+     M   G
Sbjct: 467 AVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHG 526

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
              +  T   VL ACA  A L  G  VH     + +E ++ + +AL  MY +CG ++ A 
Sbjct: 527 VAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAR 586

Query: 617 RFFDLMPV-RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
             F+ + V R+V  +N+MI+ Y+++G   +AL LF +M+ +G  PD  +FV VLSACSH 
Sbjct: 587 EIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHG 646

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           GL DEG++ F+SM Q YG+ P  + ++C VD+LGRAG L   EE I  M + P  L+W+T
Sbjct: 647 GLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKT 706

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           +LGAC +   R  + GR A +M+ E++P +   YV+L+N+ A  GKW++ A+ R  M+  
Sbjct: 707 LLGACRKY--RDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESR 764

Query: 796 EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
            ++KEAG SW+ +K  VH FVAGD SHP  + IY +L+ L+ ++R+ GYVP T+  L  +
Sbjct: 765 GLRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKV 824

Query: 856 EPESKEDLVSYHSEKIAVAFVLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLR 915
           +   KE L+  HSE++A+A  +  +S   +R+MKNLRVC DCH+A KFISKIV +EIV+R
Sbjct: 825 DEAEKERLLCQHSERLAIALGVMSSSTDTVRVMKNLRVCEDCHNATKFISKIVNKEIVVR 884

Query: 916 DSNRFHHFNDGKCSCGDYW 934
           D++RFHHF DG CSCGDYW
Sbjct: 885 DTHRFHHFVDGSCSCGDYW 903



 Score =  268 bits (686), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 178/624 (28%), Positives = 307/624 (49%), Gaps = 62/624 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H +I+  G   +  L N L+ +Y++   L    ++F  +  R+  SW  I++ YT  
Sbjct: 49  RRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEH 106

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G +  A  MF  M + G   +     +VL+AC   G      G  +H  +++S      +
Sbjct: 107 GQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGD--LSQGRSIHAWIVESGLKGKSV 164

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           ++N+L+ +YGSC      A  +FE++E RDL+SWN+ I+  +Q GD     +LF RMQ E
Sbjct: 165 LANLLLHIYGSC-GCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALELFQRMQLE 222

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G R    P   T    +T     V +     Q I  +V+++GL   L V +AL S +ARL
Sbjct: 223 GVR----PARITLVIALT-----VCATIRQAQAIHFIVRESGLEQTLVVSTALASAYARL 273

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLM---------------------EG------------ 271
           G+ Y A+++F++  +++VVS N ++                     EG            
Sbjct: 274 GHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNAS 333

Query: 272 -----RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                 R G+ +HG  +  GL   + +GN L++MY +CG+ +++R +F+  I  ++VSWN
Sbjct: 334 TGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFK-RIPCNAVSWN 392

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS----LGWIMLGQQIHGE 382
           TMI+G  Q G  + A+  F  M+ +G+     + ++ L + AS       +  G+++H  
Sbjct: 393 TMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSR 452

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF---FLMPEHDQVSWNSVIGAFADSEAL 439
            +  G  S+ ++  A++ +YA  G +      F    +   HD VSWN++I + +     
Sbjct: 453 IVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQ-HGH 511

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
              A+ ++  M   G +PN +T + +L A +  +    G  VH  +    + +   +  A
Sbjct: 512 GKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATA 571

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L S YG+CG ++   +IF +++  RD V +N+MI+ Y  N L  +A+ L W M Q G R 
Sbjct: 572 LASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRP 631

Query: 560 DHFTFATVLSACASVATLERGMEV 583
           D  +F +VLSAC+     + G E+
Sbjct: 632 DEQSFVSVLSACSHGGLADEGWEI 655



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 122/485 (25%), Positives = 213/485 (43%), Gaps = 70/485 (14%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           + A+  H  + + G    + +   L + Y R+G L  A ++FD   +R+ VSW  ++  Y
Sbjct: 242 RQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAY 301

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G  +EA  +F  M+  G   ++  L +    C     S  +FG  +H   L+     
Sbjct: 302 AQHGHMSEAALLFARMLHEGISPSKVTLVNASTGC-----SSLRFGRMIHGCALEKGLDR 356

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D ++ N L+ MY  C  S + AR +F+ I   + +SWN++I+  SQ+G      +LF RM
Sbjct: 357 DIVLGNALLDMYTRC-GSPEEARHLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRM 414

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ--QILAMVKKAGLLSDLYVGSALVS 239
           Q EG    + P   T+ +L+ A  S+      + +  ++ + +   G  S+  +G+A+V 
Sbjct: 415 QLEG----MAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVK 470

Query: 240 GFARLGNFYYARKIFEQMI---QKNVVSMNGLM-------EGRR---------------- 273
            +A  G    A   F++     + +VVS N ++        G+R                
Sbjct: 471 MYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPN 530

Query: 274 ------------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF- 314
                             +G+ VH +L  SG+   + V   L +MY +CG+++ +R +F 
Sbjct: 531 QITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFE 590

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC-----AS 369
           +  + +D V +N MI+   QNG   EA+  F  M+++G      S +S LS+C     A 
Sbjct: 591 KVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLAD 650

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNAL--LSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
            GW +        G+    D      + L      ADA  L RC+ V     +   + W 
Sbjct: 651 EGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDV-----KPTVLVWK 705

Query: 428 SVIGA 432
           +++GA
Sbjct: 706 TLLGA 710


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  517 bits (1332), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 285/848 (33%), Positives = 476/848 (56%), Gaps = 58/848 (6%)

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MYG C    D A  IF+++  R + +WN+++  Y   G+ +   +++  M+  G  +   
Sbjct: 1   MYGKCGSVLD-AEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSF--- 56

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
            + YTF  L+ A    ++   +   +I  +  K G  S ++V ++LV+ +A+  +   AR
Sbjct: 57  -DSYTFPVLLKAC--GIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGAR 113

Query: 252 KIFEQM-IQKNVVSMNGLMEGR-------------------------------------- 272
           K+F++M ++ +VVS N ++                                         
Sbjct: 114 KLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDS 173

Query: 273 ---RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
              + G ++H  +++SG    V V N LV MY + G + ++  +F  + GKD V+WN+M+
Sbjct: 174 SFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSML 233

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
           +G  QNG Y EA+  F  ++   L     S+IS + +   LG+++ G++IH   +K G D
Sbjct: 234 TGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFD 293

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           S++ V N L+ +YA    +S   + F LM   D +SW +    +A ++  + +A++    
Sbjct: 294 SNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYL-QALELLRQ 352

Query: 450 MRRAGWSPNGVTFINILAAASSFS-MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
           ++  G   +     +IL A    + +GK+  ++H   I+  ++ +  ++N ++  YG+CG
Sbjct: 353 LQMEGMDVDATMIGSILLACRGLNCLGKI-KEIHGYTIRGGLS-DPVLQNTIIDVYGECG 410

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
            +D   +IF  + E +D VSW SMIS Y+HN L  KA+ +   M + G   D+ T  ++L
Sbjct: 411 IIDYAVRIFESI-ECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSIL 469

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
           SA  S++TL++G E+H   +R     +  I + LVDMY++CG ++ A + F     RN+ 
Sbjct: 470 SAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLI 529

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
            W +MIS Y  HG+G+ A+ LF +MK +  +PDH+TF+ +L ACSH+GLV+EG    + M
Sbjct: 530 LWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIM 589

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT 748
              Y L P  E ++C+VDLLGR   L++  + +  M   P   +W  +LGA CR +  K 
Sbjct: 590 KCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGA-CRIHSNK- 647

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
           E+G  AA  L E++  N  NYVL++N++A+ G+W+DV + R  MK + + K  GCSW+ +
Sbjct: 648 EIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEV 707

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKM-RDAGYVPQTKFALFDLEPESKEDLVSYH 867
            + +H F++ D+ HPE D IY+KL ++ +K+ R+ GYV QTKF L ++  E K  ++  H
Sbjct: 708 GNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGH 767

Query: 868 SEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SE++A+A+ +L      PIR+ KNLRVCGDCHS    +S+   RE+++RD++RFHHF DG
Sbjct: 768 SERLAIAYGLLATAEGTPIRVTKNLRVCGDCHSFCTLVSRFFERELIVRDASRFHHFKDG 827

Query: 927 KCSCGDYW 934
            CSCGD+W
Sbjct: 828 MCSCGDFW 835



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 194/684 (28%), Positives = 325/684 (47%), Gaps = 73/684 (10%)

Query: 29  VYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYA 88
           +Y + G +  A  +FD+M +R+  +W  ++ GY   G +  A +M++EM   G   + Y 
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 89  LGSVLRACQECGPSGFKF-GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIF 147
              +L+AC   G     F G ++H L +K        V N L+A+Y  C    + AR++F
Sbjct: 61  FPVLLKAC---GIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKC-NDINGARKLF 116

Query: 148 EEIETR-DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS 206
           + +  R D++SWNSIIS YS  G       LFS M + G    +  N YTF + + A   
Sbjct: 117 DRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAG----VVTNTYTFAAALQACED 172

Query: 207 SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN 266
           S  S   L  QI A + K+G + D+YV +ALV+ + R G    A  IF  +  K++V+ N
Sbjct: 173 S--SFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWN 230

Query: 267 GLMEGRRK-----------------------------------------GKEVHGYLIRS 285
            ++ G  +                                         GKE+H Y I++
Sbjct: 231 SMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKN 290

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
           G    + VGN L++MYAKC  +      F  M  KD +SW T  +G  QN CY +A+   
Sbjct: 291 GFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELL 350

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             ++ +G+      + S L +C  L  +   ++IHG  ++ GL SD  + N ++ +Y + 
Sbjct: 351 RQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQNTIIDVYGEC 409

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
           G +   +++F  +   D VSW S+I  +  +  L ++A++ +  M+  G  P+ VT ++I
Sbjct: 410 GIIDYAVRIFESIECKDVVSWTSMISCYVHN-GLANKALEVFSSMKETGLEPDYVTLVSI 468

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           L+A  S S  K G ++H  +I+     E +I N L+  Y +CG ++D  KIF   ++ R+
Sbjct: 469 LSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFT-CTKNRN 527

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL--DHFTFATVLSACASVATLERG--- 580
            + W +MIS Y  +     A+ L  FM  + +++  DH TF  +L AC+    +  G   
Sbjct: 528 LILWTAMISAYGMHGYGEAAVEL--FMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSF 585

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM---PVRNVYSWNSMISGY 637
           +E+  C  +  LE      + LVD+  +   ++ A +    M   P   V  W +++   
Sbjct: 586 LEIMKCEYQ--LEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEV--WCALLGAC 641

Query: 638 ARHGH---GDKALTLFSQMKLDGP 658
             H +   G+ A     ++ LD P
Sbjct: 642 RIHSNKEIGEVAAEKLLELDLDNP 665



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 159/510 (31%), Positives = 254/510 (49%), Gaps = 61/510 (11%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSV-SWACIVSGYTHKG 65
            H   +K+G    VF+ N+L+ +Y +  D+  A KLFD M  RN V SW  I+S Y+  G
Sbjct: 80  IHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNG 139

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
           M  EA  +F EM++AG + N Y   + L+AC++   S  K GMQ+H  +LKS +  D  V
Sbjct: 140 MCTEALCLFSEMLKAGVVTNTYTFAAALQACED--SSFIKLGMQIHAAILKSGRVLDVYV 197

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           +N L+AMY    +  + A  IF  +E +D+++WNS+++ + Q G      + F  +Q   
Sbjct: 198 ANALVAMYVRFGKMPEAA-VIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNA- 255

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSG--SYLL--QQILAMVKKAGLLSDLYVGSALVSGF 241
               LKP++ +  S+I A      SG   YLL  ++I A   K G  S++ VG+ L+  +
Sbjct: 256 ---DLKPDQVSIISIIVA------SGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMY 306

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGL---------------------MEGRR------- 273
           A+     Y  + F+ M  K+++S                         MEG         
Sbjct: 307 AKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIG 366

Query: 274 -------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                        K KE+HGY IR GL D V + N ++++Y +CG ID +  +F  +  K
Sbjct: 367 SILLACRGLNCLGKIKEIHGYTIRGGLSDPV-LQNTIIDVYGECGIIDYAVRIFESIECK 425

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D VSW +MIS    NG   +A+  F +M+  GL     +L+S LS+  SL  +  G++IH
Sbjct: 426 DVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIH 485

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
           G  ++ G   + S+SN L+ +YA  G +    K+F      + + W ++I A+       
Sbjct: 486 GFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYG-MHGYG 544

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
             AV+ ++ M+     P+ +TF+ +L A S
Sbjct: 545 EAAVELFMRMKDEKIIPDHITFLALLYACS 574



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 140/279 (50%), Gaps = 14/279 (5%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H   +K+GF  ++ + NTLI++Y +   ++   + FD M  ++ +SW    +GY 
Sbjct: 279 NGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYA 338

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                 +A ++ +++   G  ++   +GS+L AC+  G +      ++H   ++   + D
Sbjct: 339 QNKCYLQALELLRQLQMEGMDVDATMIGSILLACR--GLNCLGKIKEIHGYTIRGGLS-D 395

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            ++ N +I +YG C    D A RIFE IE +D++SW S+IS Y   G      ++FS M+
Sbjct: 396 PVLQNTIIDVYGEC-GIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMK 454

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             G    L+P+  T  S+++A  S  LS     ++I   + + G + +  + + LV  +A
Sbjct: 455 ETG----LEPDYVTLVSILSAVCS--LSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYA 508

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY 281
           R G+   A KIF     +N++    ++        +HGY
Sbjct: 509 RCGSVEDAYKIFTCTKNRNLILWTAMISAYG----MHGY 543



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 8/205 (3%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   ++ G + D  L NT+I+VY   G +  A ++F+ +  ++ VSW  ++S Y H 
Sbjct: 382 KEIHGYTIRGGLS-DPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHN 440

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G++N+A ++F  M   G   +   L S+L A   C  S  K G ++H  +++     +G 
Sbjct: 441 GLANKALEVFSSMKETGLEPDYVTLVSILSAV--CSLSTLKKGKEIHGFIIRKGFILEGS 498

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           +SN L+ MY  C    D A +IF   + R+LI W ++IS Y   G   +  +LF RM+ E
Sbjct: 499 ISNTLVDMYARCGSVED-AYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDE 557

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVL 209
                + P+  TF +L+ A   S L
Sbjct: 558 ----KIIPDHITFLALLYACSHSGL 578



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 47/99 (47%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  I++ GF  +  + NTL+++Y R G +  A K+F    +RN + W  ++S Y
Sbjct: 479 KKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAY 538

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G    A ++F  M     + +     ++L AC   G
Sbjct: 539 GMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSG 577


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  517 bits (1332), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 298/874 (34%), Positives = 476/874 (54%), Gaps = 56/874 (6%)

Query: 107 GMQVHC--LVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISV 164
           G+QVH   +   S +  DG ++  L+ MYG C    D AR +F+ + +R + SWN++I  
Sbjct: 77  GVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVAD-ARLLFDGMSSRTVFSWNALIGA 135

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
           Y   G       ++ R  R      + P+  T  S++ A  S V        ++  +  K
Sbjct: 136 YLSSGSACEALGVY-RAMRLSAASGVAPDGCTLASVLKA--SGVEGDGRCGCEVHGLAVK 192

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQM--------------------------- 257
            GL    +V +AL++ +A+ G    A ++FE M                           
Sbjct: 193 HGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALD 252

Query: 258 ----IQKNVVSMN-----GLMEGRRK------GKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
               +Q+ V+SMN     G+++   +      G+E+H  L++SG  ++    N L+ MY 
Sbjct: 253 LFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSG-SEVNIQCNALLVMYT 311

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIS 362
           KCG +D +  VFR +  KD +SWN+M+S   QNG Y EAI     M R G    +  ++S
Sbjct: 312 KCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVS 371

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
             S+   LGW++ G+++H   +K  LDSD  V N L+ +Y    Y+     VF  M   D
Sbjct: 372 LSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKD 431

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
            +SW ++I  +A S   + EA++ + + ++ G   + +   +IL A S      L  Q+H
Sbjct: 432 HISWTTIITCYAQSSRHI-EALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLH 490

Query: 483 AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
              I+ N   +  ++N ++  YG+CGE+    K+F  + E++D V+W SMI+ Y ++ LL
Sbjct: 491 CYAIR-NGLLDLVVKNRIIDIYGECGEVYHSLKMFETV-EQKDIVTWTSMINCYANSGLL 548

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
            +A+ L   M     + D     ++L A   +++L +G EVH   +R     +  I S+L
Sbjct: 549 NEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSL 608

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           VDMYS CG +  A + F+ +  +++  W +MI+    HGHG +A+ LF +M   G  PDH
Sbjct: 609 VDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDH 668

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFIN 722
           V+F+ +L ACSH+ LV+EG  +   M   Y L P  E ++C+VDLLGR+G+ ++  EFI 
Sbjct: 669 VSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIK 728

Query: 723 KMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKW 782
            MP+ P S++W ++LGA CR + +  EL   AAN L E+EP N  NYVL++N++A  GKW
Sbjct: 729 SMPLKPKSVVWCSLLGA-CRVH-KNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKW 786

Query: 783 EDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR-D 841
            +  + R  + E  ++K+  CSW+ + + VH F   D SH + + I  KL E+ +++R +
Sbjct: 787 NNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKE 846

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSA 900
            GY   T+  L D+  E K D++  HSE++A++F ++     +P+RI KNLRVCGDCH  
Sbjct: 847 GGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCHEF 906

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            K +SK+  R+IV+RD+NRFHHF+ G CSCGD+W
Sbjct: 907 TKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 194/705 (27%), Positives = 322/705 (45%), Gaps = 93/705 (13%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM- 77
           D FL   L+ +Y + G +A A  LFD M  R   SW  ++  Y   G + EA  +++ M 
Sbjct: 94  DGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMR 153

Query: 78  --VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS 135
               +G   +   L SVL+A    G    + G +VH L +K        V+N LIAMY  
Sbjct: 154 LSAASGVAPDGCTLASVLKASGVEGDG--RCGCEVHGLAVKHGLDRSTFVANALIAMYAK 211

Query: 136 CLESTDCARRIFEEI-ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
           C    D A R+FE + + RD+ SWNS+IS   Q G  +    LF  MQR      L  N 
Sbjct: 212 C-GILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRA----VLSMNS 266

Query: 195 YTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
           YT   ++     + L+   L +++ A + K+G   ++   + LV  + + G    A ++F
Sbjct: 267 YTTVGVLQVC--TELAQLNLGRELHAALLKSGSEVNIQCNALLVM-YTKCGRVDSALRVF 323

Query: 255 EQMIQKNVVSMNGLM-----------------EGRR------------------------ 273
            ++ +K+ +S N ++                 E  R                        
Sbjct: 324 REIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLL 383

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
            GKEVH Y I+  L     VGN L++MY KC  I+ S  VF  M  KD +SW T+I+   
Sbjct: 384 NGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYA 443

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           Q+  + EA+  F   +++G+      + S L +C+ L  I+L +Q+H   ++ GL  D+ 
Sbjct: 444 QSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL-LDLV 502

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V N ++ +Y + G +   LK+F  + + D V+W S+I  +A+S  L++EA+  + +M+  
Sbjct: 503 VKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANS-GLLNEALVLFAEMQST 561

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
              P+ V  ++IL A    S    G +VH  +I+ N   E  I ++L+  Y  CG +   
Sbjct: 562 DVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGA 621

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA- 572
            K+F  + + +D V W +MI+    +    +A++L   M+Q G   DH +F  +L AC+ 
Sbjct: 622 LKVFNAV-KCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSH 680

Query: 573 ---------------SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
                          S   LE   E +AC               +VD+  + G+ + A  
Sbjct: 681 SKLVNEGKCYLDMMMSTYRLEPWQEHYAC---------------VVDLLGRSGQTEEAYE 725

Query: 618 FFDLMPVR-NVYSWNSMISGYARHGHGDKALTLFS---QMKLDGP 658
           F   MP++     W S++     H + + A+   +   +++ D P
Sbjct: 726 FIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNP 770



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 186/403 (46%), Gaps = 52/403 (12%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +LK G   ++  CN L+ +Y + G + SA ++F E+ +++ +SW  ++S Y   G+
Sbjct: 288 LHAALLKSGSEVNI-QCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGL 346

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA +   EM+R GF  +   + S+  A    G      G +VH   +K     D  V 
Sbjct: 347 YAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLG--WLLNGKEVHAYAIKQRLDSDTQVG 404

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+ MY  C    + +  +F+ +  +D ISW +II+ Y+Q    I   ++F   Q+EG 
Sbjct: 405 NTLMDMYMKC-RYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEG- 462

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              +K +    GS++ A   S L    L +Q+     + GLL DL V + ++  +   G 
Sbjct: 463 ---IKVDPMMIGSILEAC--SGLETILLAKQLHCYAIRNGLL-DLVVKNRIIDIYGECGE 516

Query: 247 FYYARKIFEQMIQKNVVSMN---------------------------------------- 266
            Y++ K+FE + QK++V+                                          
Sbjct: 517 VYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGA 576

Query: 267 -GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
            G +    KGKEVHG+LIR       A+ + LV+MY+ CG++  +  VF  +  KD V W
Sbjct: 577 IGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLW 636

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
             MI+    +G  ++AI  F  M + G+   + S ++ L +C+
Sbjct: 637 TAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACS 679



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 62/122 (50%), Gaps = 7/122 (5%)

Query: 555 RGQRLDHFTFATVLSACASVATLERGMEVHACGV-RACLEFDV-VIGSALVDMYSKCGRI 612
           R    +H+ +  VL   A+   + +G++VHA  V    LE D   + + L+ MY KCGR+
Sbjct: 54  RSPPQEHYGW--VLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRV 111

Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL---DGPLPDHVTFVGVL 669
             A   FD M  R V+SWN++I  Y   G   +AL ++  M+L    G  PD  T   VL
Sbjct: 112 ADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVL 171

Query: 670 SA 671
            A
Sbjct: 172 KA 173



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 21/93 (22%), Positives = 48/93 (51%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  +++  F  +  + ++L+++Y   G L+ A K+F+ +  ++ V W  +++    
Sbjct: 586 GKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGM 645

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRAC 96
            G   +A  +FK M++ G   +  +  ++L AC
Sbjct: 646 HGHGKQAIDLFKRMLQTGVTPDHVSFLALLYAC 678


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  517 bits (1332), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 271/665 (40%), Positives = 396/665 (59%), Gaps = 10/665 (1%)

Query: 275 GKEVHGYLIRSGLFDMVA-VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           G+ +H ++IR+ +  + + + N LVNMY+K   ++ ++ V      +  V+W ++ISG  
Sbjct: 25  GRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCV 84

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            N  +  A+++F  MRRD +  ++F+      + A +   M G+QIHG  LK G+  DV 
Sbjct: 85  HNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVF 144

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI-GAFADSEALVSEAVKYYLDMRR 452
           V  +   +Y   G+      +F  MP+ +  +WN+ I  A  D  +L  +A+  + +   
Sbjct: 145 VGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSL--DAIVAFKEFLC 202

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
               PN +TF   L A        LG Q+HA +++     + ++ N L+  YGKCG++  
Sbjct: 203 VHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVS 262

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
            E +F R+  R++ VSW SM++  + N    +A  +V+   ++      F  ++VLSACA
Sbjct: 263 AEMVFNRIGNRKNVVSWCSMLAALVQNHEEERAC-MVFLQARKEVEPTDFMISSVLSACA 321

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
            +  LE G  VHA  V+AC+E ++ +GSALVDMY KCG I+ A + F  +P RN+ +WN+
Sbjct: 322 ELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNA 381

Query: 633 MISGYARHGHGDKALTLFSQMKL--DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           MI GYA  G  D AL LF +M L   G  P +VT + +LS CS  G V+ G + F+SM  
Sbjct: 382 MIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRL 441

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
            YG+ P  E F+C+VDLLGR+G +D+  EFI  M I P   +W  +LGAC      KTEL
Sbjct: 442 NYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHG--KTEL 499

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
           G+ AA  LFE++  ++ N+V+L+NM AS G+WE+    RK MK+  +KK  G SW+ +K+
Sbjct: 500 GKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKN 559

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
            +HVF A D SH     I   L +L   M++AGYVP T  +LFDLE E K   V YHSEK
Sbjct: 560 RIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEK 619

Query: 871 IAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           IA+AF ++     +PIRI KNLR+CGDCHSA KFIS+IVGREI++RD++RFH F DG CS
Sbjct: 620 IALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCS 679

Query: 930 CGDYW 934
           C DYW
Sbjct: 680 CKDYW 684



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 220/524 (41%), Gaps = 78/524 (14%)

Query: 4   AKLFHLQILK-HGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
            +  H  I++ H      FL N L+N+Y ++  L SA  +      R  V+W  ++SG  
Sbjct: 25  GRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCV 84

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGF----KFGMQVHCLVLKSN 118
           H      A   F  M R     N +    V +A      S F      G Q+H L LK  
Sbjct: 85  HNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKA------SAFVQIPMTGKQIHGLALKGG 138

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS--VYSQRG-DTISVF 175
             +D  V      MY       D A  +F+E+  R+L +WN+ IS  V  +R  D I  F
Sbjct: 139 MIYDVFVGCSCFDMYCKTGFRGD-ACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAF 197

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS 235
           K F  +  E       PN  TF + + A    V     L +Q+ A + + G   D+ V +
Sbjct: 198 KEFLCVHGE-------PNSITFCAFLNACVDMVRLN--LGRQLHAFIVRCGYKEDVSVAN 248

Query: 236 ALVSGFARLGNFYYARKIFEQM-IQKNVVSMNGLME------------------------ 270
            L+  + + G+   A  +F ++  +KNVVS   ++                         
Sbjct: 249 GLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKEVEP 308

Query: 271 ----------------GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                           G   G+ VH   +++ + D + VG+ LV+MY KCG+I+++  VF
Sbjct: 309 TDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVF 368

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR--RDGLMSSNFSLISTLSSCASLGW 372
             +  ++ V+WN MI G    G  + A+  F  M     G+  S  +LIS LS C+ +G 
Sbjct: 369 SELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGA 428

Query: 373 IMLGQQIHGEGLKL--GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSV 429
           +  G QI  E ++L  G++        ++ L   +G + R  +    M     +S W ++
Sbjct: 429 VERGIQIF-ESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGAL 487

Query: 430 IGA---FADSEALVSEAVKYY-LDMRRAGWSPNGVTFINILAAA 469
           +GA      +E     A K + LD   +G   N V   N+LA+A
Sbjct: 488 LGACRMHGKTELGKIAAEKLFELDHVDSG---NHVVLSNMLASA 528



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 152/321 (47%), Gaps = 14/321 (4%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR-NSVSWACIVSGYT 62
            +  H  I++ G+  DV + N LI+ Y + GD+ SA  +F+ + +R N VSW  +++   
Sbjct: 228 GRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALV 287

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                  AC +F +  R       + + SVL AC E G  G + G  VH L +K+    +
Sbjct: 288 QNHEEERACMVFLQ-ARKEVEPTDFMISSVLSACAELG--GLELGRSVHALAVKACVEDN 344

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V + L+ MYG C  S + A ++F E+  R+L++WN++I  Y+ +GD     +LF  M 
Sbjct: 345 IFVGSALVDMYGKC-GSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMT 403

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
                + ++P+  T  S+++   S V +    +Q   +M    G+       + +V    
Sbjct: 404 LGS--HGIRPSYVTLISILSVC-SRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLG 460

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG---- 296
           R G    A +  + M  +  +S+ G + G  R  GK   G +    LF++  V +G    
Sbjct: 461 RSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVV 520

Query: 297 LVNMYAKCGTIDDSRSVFRFM 317
           L NM A  G  +++  V + M
Sbjct: 521 LSNMLASAGRWEEATVVRKEM 541


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  517 bits (1332), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 285/750 (38%), Positives = 430/750 (57%), Gaps = 54/750 (7%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK--------------- 274
           D+ VG++LV  + +  +    RK+FE M ++NVV+   L+ G  +               
Sbjct: 138 DVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMR 197

Query: 275 --------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
                                     G+ VH   ++ G    V V N L+NMYAKCG ++
Sbjct: 198 AEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVE 257

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
           ++R VF  M  +D VSWNT+++GL  NG   EA+  F   R    M +  +  + +  CA
Sbjct: 258 EARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCA 317

Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWN 427
           ++  + L +Q+H   LK G  S  +V  AL+  Y+ AG L   L +F LM    + VSW 
Sbjct: 318 NIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWT 377

Query: 428 SVI-GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
           ++I G   + +  ++ A+  +  MR  G +PN  T+  IL A    S+  L  Q+HAQVI
Sbjct: 378 AMINGCIQNGDVPLAAAL--FSRMREDGVAPNDFTYSTILTA----SVASLPPQIHAQVI 431

Query: 487 KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAM 546
           K N    + +  ALL+ Y K    ++   IF +M +++D VSW++M++ Y        A 
Sbjct: 432 KTNYECTSIVGTALLASYSKLCNTEEALSIF-KMIDQKDVVSWSAMLTCYAQAGDSDGAT 490

Query: 547 NLVWFMMQRGQRLDHFTFATVLSACAS-VATLERGMEVHACGVRACLEFDVVIGSALVDM 605
           N+   M   G + + FT ++V+ ACAS  A ++ G + HA  ++      + + SALV M
Sbjct: 491 NIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSM 550

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
           Y++ G I+ A   F+    R++ SWNSM+SGYA+HG+  KAL +F QM+ +G   D VTF
Sbjct: 551 YARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTF 610

Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
           + V+  C+HAGLV+EG ++F SM++ YG+ P +E ++CMVDL  RAG+LD+    I  M 
Sbjct: 611 LSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMS 670

Query: 726 ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDV 785
                ++WRT+LGAC     +  ELG+ AA  L  +EP ++  YVLL+N+Y++ GKW++ 
Sbjct: 671 FPAGPMVWRTLLGAC--KVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEK 728

Query: 786 AKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
            + RK M   +VKKEAGCSW+ +K+ VH F+A D+SHP  + IY KL+ +  K++  GY 
Sbjct: 729 DEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYC 788

Query: 846 PQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFI 904
           P T FAL ++  E KE +++ HSE++A+AF ++      P+ I KNLRVCGDCH+  K +
Sbjct: 789 PDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVCGDCHTVIKMV 848

Query: 905 SKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           SKI  REIV+RD +RFHHFN G CSCGD+W
Sbjct: 849 SKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 176/653 (26%), Positives = 305/653 (46%), Gaps = 77/653 (11%)

Query: 23  CNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRA-G 81
           C+  +     + D   A + FDE+P RN++  A     +  +G  ++A   F ++ R  G
Sbjct: 41  CSVPLENQTNLNDATGARQAFDEIPHRNTLDHALF--DHARRGSVHQALDHFLDVHRCHG 98

Query: 82  FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLK-SNQTFDGLVSNVLIAMYGSCLEST 140
             +   AL  VL+ C    P     G Q+H L ++  +   D  V   L+ MY       
Sbjct: 99  GRVGGGALVGVLKVCGSV-PDRV-LGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVV 156

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
           D  R++FE +  R++++W S+++ Y Q G    V +LF RM+ EG    + PN  TF S+
Sbjct: 157 D-GRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEG----VWPNSVTFASV 211

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
           ++   S  +    L +++ A   K G  S ++V ++L++ +A+ G    AR +F  M  +
Sbjct: 212 LSVVASQGMVD--LGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETR 269

Query: 261 NVVSMNGLMEG---------------------------------------RRKG--KEVH 279
           ++VS N LM G                                       ++ G  +++H
Sbjct: 270 DMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLH 329

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG-KDSVSWNTMISGLDQNGCY 338
             +++ G      V   L++ Y+K G + ++  +F  M G ++ VSW  MI+G  QNG  
Sbjct: 330 SSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDV 389

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
             A   F  MR DG+  ++F+  + L++  +     L  QIH + +K   +    V  AL
Sbjct: 390 PLAAALFSRMREDGVAPNDFTYSTILTASVA----SLPPQIHAQVIKTNYECTSIVGTAL 445

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA---DSEALVSEAVKYYLDMRRAGW 455
           L+ Y+        L +F ++ + D VSW++++  +A   DS+     A   ++ M   G 
Sbjct: 446 LASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDG----ATNIFIKMTMHGL 501

Query: 456 SPNGVTFINILAAASSFSMG-KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
            PN  T  +++ A +S + G  LG Q HA  IK+   +   + +AL+S Y + G ++  +
Sbjct: 502 KPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQ 561

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
            IF R ++ RD VSWNSM+SGY  +    KA+++   M   G  +D  TF +V+  CA  
Sbjct: 562 CIFERQTD-RDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHA 620

Query: 575 ATLERGME-----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
             +E G           G+   +E      + +VD+YS+ G++D A    + M
Sbjct: 621 GLVEEGQRYFDSMARDYGITPTMEHY----ACMVDLYSRAGKLDEAMSLIEGM 669



 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 142/461 (30%), Positives = 242/461 (52%), Gaps = 12/461 (2%)

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSGLFDM--VAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
           V+ + G +  R  GK++HG  IR G  D   V VG  LV+MY K  ++ D R VF  M  
Sbjct: 109 VLKVCGSVPDRVLGKQLHGLCIRCG-HDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPK 167

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           ++ V+W ++++G  Q+G   + +  F  MR +G+  ++ +  S LS  AS G + LG+++
Sbjct: 168 RNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRV 227

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI-GAFADSEA 438
           H + +K G  S V V N+L+++YA  G +     VF  M   D VSWN+++ G   +   
Sbjct: 228 HAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHD 287

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
           L  EA++ + D R +       T+  ++   ++     L  Q+H+ V+K    +   +  
Sbjct: 288 L--EALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMT 345

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
           AL+  Y K G++ +   IF  MS  ++ VSW +MI+G I N  +P A  L   M + G  
Sbjct: 346 ALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVA 405

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
            + FT++T+L+  ASVA+L    ++HA  ++   E   ++G+AL+  YSK    + A   
Sbjct: 406 PNDFTYSTILT--ASVASLPP--QIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSI 461

Query: 619 FDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC-SHAGL 677
           F ++  ++V SW++M++ YA+ G  D A  +F +M + G  P+  T   V+ AC S    
Sbjct: 462 FKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAG 521

Query: 678 VDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
           VD G + F ++S  +     L   S +V +  R G ++  +
Sbjct: 522 VDLG-RQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQ 561



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 233/483 (48%), Gaps = 36/483 (7%)

Query: 334 QNGCYEEAIMNFCAMRR-DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD-SD 391
           + G   +A+ +F  + R  G      +L+  L  C S+   +LG+Q+HG  ++ G D  D
Sbjct: 79  RRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGD 138

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           V V  +L+ +Y     +    KVF  MP+ + V+W S++  +    AL S+ ++ +  MR
Sbjct: 139 VGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGAL-SDVMELFFRMR 197

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             G  PN VTF ++L+  +S  M  LG +VHAQ +K+   +   + N+L++ Y KCG ++
Sbjct: 198 AEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVE 257

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
           +   +F  M E RD VSWN++++G + N    +A+ L          L   T+ATV+  C
Sbjct: 258 EARVVFCGM-ETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLC 316

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP-VRNVYSW 630
           A++  L    ++H+  ++        + +AL+D YSK G++  A   F LM   +NV SW
Sbjct: 317 ANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSW 376

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-------HAGLVDEGFK 683
            +MI+G  ++G    A  LFS+M+ DG  P+  T+  +L+A         HA ++   ++
Sbjct: 377 TAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLPPQIHAQVIKTNYE 436

Query: 684 -----------------HFKSMSQVYGLIPQLE--QFSCMVDLLGRAGELDKIEEFINKM 724
                            + +    ++ +I Q +   +S M+    +AG+ D       KM
Sbjct: 437 CTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKM 496

Query: 725 P---ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY-VLLANMYASGG 780
               + PN     +V+ AC        +LGR+   +  +    +A+     L +MYA  G
Sbjct: 497 TMHGLKPNEFTISSVIDACASPTA-GVDLGRQFHAISIKHRCHDALCVSSALVSMYARKG 555

Query: 781 KWE 783
             E
Sbjct: 556 SIE 558



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 135/556 (24%), Positives = 245/556 (44%), Gaps = 52/556 (9%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV +  +L+++Y++   +    K+F+ MP RN V+W  +++GY   G  ++  ++F  M 
Sbjct: 138 DVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMR 197

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             G   N     SVL      G      G +VH   +K        V N L+ MY  C  
Sbjct: 198 AEGVWPNSVTFASVLSVVASQGM--VDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKC-G 254

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKP-NEYTF 197
             + AR +F  +ETRD++SWN++++     G  +   +LF        R S+    + T+
Sbjct: 255 LVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLF-----HDSRSSITMLTQSTY 309

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            ++I    +    G  L +Q+ + V K G  S   V +AL+  +++ G    A  IF  M
Sbjct: 310 ATVIKLCANIKQLG--LARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLM 367

Query: 258 I-QKNVVSMNGLMEG-----------------RRKG--------------------KEVH 279
              +NVVS   ++ G                 R  G                     ++H
Sbjct: 368 SGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLPPQIH 427

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
             +I++       VG  L+  Y+K    +++ S+F+ +  KD VSW+ M++   Q G  +
Sbjct: 428 AQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSD 487

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCAS-LGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
            A   F  M   GL  + F++ S + +CAS    + LG+Q H   +K      + VS+AL
Sbjct: 488 GATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSAL 547

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           +S+YA  G +     +F    + D VSWNS++  +A       +A+  +  M   G   +
Sbjct: 548 VSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQ-HGYSQKALDVFRQMEAEGIEMD 606

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIF 517
           GVTF++++   +   + + G +    + + Y +         ++  Y + G++D+   + 
Sbjct: 607 GVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLI 666

Query: 518 ARMSERRDEVSWNSMI 533
             MS     + W +++
Sbjct: 667 EGMSFPAGPMVWRTLL 682



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 214/470 (45%), Gaps = 58/470 (12%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q +K G    VF+CN+L+N+Y + G +  A  +F  M  R+ VSW  +++G    G  
Sbjct: 228 HAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHD 287

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA ++F +   +  +L +    +V++ C      G     Q+H  VLK      G V  
Sbjct: 288 LEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLG--LARQLHSSVLKRGFHSYGNVMT 345

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+  Y    +  +          +++++SW ++I+   Q GD      LFSRM+ +G  
Sbjct: 346 ALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDG-- 403

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             + PN++T+ +++TA+ +S      L  QI A V K        VG+AL++ +++L N 
Sbjct: 404 --VAPNDFTYSTILTASVAS------LPPQIHAQVIKTNYECTSIVGTALLASYSKLCNT 455

Query: 248 YYARKIFEQMIQKNVVS-------------------------MNGL-------------- 268
             A  IF+ + QK+VVS                         M+GL              
Sbjct: 456 EEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDAC 515

Query: 269 ---MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                G   G++ H   I+    D + V + LV+MYA+ G+I+ ++ +F     +D VSW
Sbjct: 516 ASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSW 575

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IHGEGL 384
           N+M+SG  Q+G  ++A+  F  M  +G+     + +S +  CA  G +  GQ+       
Sbjct: 576 NSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMAR 635

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM--PEHDQVSWNSVIGA 432
             G+   +     ++ LY+ AG L   + +   M  P    V W +++GA
Sbjct: 636 DYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMV-WRTLLGA 684



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 163/353 (46%), Gaps = 46/353 (13%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP-DRNSVSWACIVSGYT 62
           A+  H  +LK GF     +   L++ Y + G L +A  +F  M   +N VSW  +++G  
Sbjct: 325 ARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCI 384

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G    A  +F  M   G   N +   ++L A     P       Q+H  V+K+N    
Sbjct: 385 QNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLPP------QIHAQVIKTNYECT 438

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            +V   L+A Y S L +T+ A  IF+ I+ +D++SW+++++ Y+Q GD+     +F +M 
Sbjct: 439 SIVGTALLASY-SKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMT 497

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             G    LKPNE+T  S+I A  S   +G  L +Q  A+  K      L V SALVS +A
Sbjct: 498 MHG----LKPNEFTISSVIDACASPT-AGVDLGRQFHAISIKHRCHDALCVSSALVSMYA 552

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
           R G+   A+ IFE+   +++VS N ++ G                             YA
Sbjct: 553 RKGSIESAQCIFERQTDRDLVSWNSMLSG-----------------------------YA 583

Query: 303 KCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           + G    +  VFR M    I  D V++ ++I G    G  EE    F +M RD
Sbjct: 584 QHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARD 636


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 324/959 (33%), Positives = 492/959 (51%), Gaps = 68/959 (7%)

Query: 26   LINVYVRVGDLASASKLFDEMPDR--NSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
            L+  Y++ GDL  A  +FDEMP R  +   W  ++S Y   G   E   +F++M   G  
Sbjct: 136  LVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVS 195

Query: 84   LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
             + +A+  VL+     G      G  +H L+ K        V+N LIA+Y  C    D A
Sbjct: 196  PDAHAVSCVLKCIASLG--SITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMED-A 252

Query: 144  RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
             ++F+ +  RD ISWNS IS Y   G       LFS+M  EG   S      T  S++ A
Sbjct: 253  MQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEIS----SVTVLSVLPA 308

Query: 204  AYSSVLSGSYLLQQILAMVKKAGLLSDL---------YVGSALVSGFARLGNFYYARKIF 254
               + L    + + +     K+GLL DL          +GS LV  + + G+   AR++F
Sbjct: 309  C--AELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVF 366

Query: 255  EQMIQK-NVVSMNGLMEGRRKGKE------------------------------------ 277
            + M  K NV   N +M G  K  E                                    
Sbjct: 367  DAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCA 426

Query: 278  -----VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
                  HGYL++ G     AV N L++ YAK   ID++  VF  M  +D++SWN++ISG 
Sbjct: 427  RDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGC 486

Query: 333  DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
              NG   EAI  F  M   G    + +L+S L +CA   +  +G+ +HG  +K GL  + 
Sbjct: 487  TSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGET 546

Query: 393  SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            S++NALL +Y++        ++F  M + + VSW ++I ++  +  L  +      +M  
Sbjct: 547  SLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRA-GLFDKVAGLLQEMVL 605

Query: 453  AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
             G  P+     ++L   +     K G  VH   I+  +     + NAL+  Y  C  M++
Sbjct: 606  DGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEE 665

Query: 513  CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
               +F  ++ + D +SWN++I GY  N    ++ +L   M+ +  + +  T   +L A A
Sbjct: 666  ARLVFDHVTNK-DIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVA 723

Query: 573  SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
            S+++LERG E+HA  +R     D    +ALVDMY KCG +  A   FD +  +N+ SW  
Sbjct: 724  SISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTI 783

Query: 633  MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
            MI+GY  HG G  A+ LF QM+  G  PD  +F  +L AC H+GL  EG+K F +M + Y
Sbjct: 784  MIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEY 843

Query: 693  GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
             + P+L+ ++C+VDLL   G L +  EFI  MPI P+S IW ++L   CR + R  +L  
Sbjct: 844  KIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHG-CRIH-RDVKLAE 901

Query: 753  KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
            K A+ +F++EP+N   YVLLAN+YA   +WE V K +  +    +++  GCSW+ ++  V
Sbjct: 902  KVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKV 961

Query: 813  HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
            HVF+A + +HPE + I E L  + ++MR+ G+ P+ K++L        ++ +  HS K+A
Sbjct: 962  HVFIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKKYSLMGANDAVHDEALCGHSSKLA 1021

Query: 873  VAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
            V F VL      PIR+ KN +VC  CH A KFISK+  REI+LRDS+RFHHF  G+CSC
Sbjct: 1022 VTFGVLHLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHHFEGGRCSC 1080



 Score =  212 bits (540), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 174/698 (24%), Positives = 312/698 (44%), Gaps = 79/698 (11%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + ++ H  + K G      + N LI +Y R G +  A ++FD M  R+++SW   +SGY 
Sbjct: 216 EGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYF 275

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKF-GMQVHCLVLKS---- 117
             G  + A  +F +M   G  ++   + SVL AC E    GF+  G  VH   +KS    
Sbjct: 276 SNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAEL---GFELVGKVVHGYSMKSGLLW 332

Query: 118 -----NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR-DLISWNSIISVYSQRGDT 171
                    D  + + L+ MY  C +    ARR+F+ + ++ ++  WN I+  Y++  + 
Sbjct: 333 DLESVQSGIDEALGSKLVFMYVKCGD-MGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEF 391

Query: 172 ISVFKLFSRMQREGFRYSLKPNEYTFGSL------ITAAYSSVLSGSYLLQQILAMVKKA 225
                LF +M   G    + P+E+    L      ++ A   +++  YL+        K 
Sbjct: 392 EESLLLFEQMHELG----ITPDEHALSCLLKCITCLSCARDGLVAHGYLV--------KL 439

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------- 274
           G  +   V +AL+S +A+      A  +F++M  ++ +S N ++ G              
Sbjct: 440 GFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELF 499

Query: 275 ------------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
                                         G+ VHGY +++GL    ++ N L++MY+ C
Sbjct: 500 VRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNC 559

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
                +  +FR M  K+ VSW  MI+   + G +++       M  DG+    F++ S L
Sbjct: 560 SDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVL 619

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
              A    +  G+ +HG  ++ G++  + V+NAL+ +Y +   +     VF  +   D +
Sbjct: 620 HGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDII 679

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           SWN++IG ++ +    +E+   + DM    + PN VT   IL A +S S  + G ++HA 
Sbjct: 680 SWNTLIGGYSRNN-FANESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGREIHAY 737

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
            ++     ++   NAL+  Y KCG +     +F R++ +++ +SW  MI+GY  +     
Sbjct: 738 ALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLT-KKNLISWTIMIAGYGMHGCGKD 796

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALV 603
           A+ L   M   G   D  +F+ +L AC        G +  +A      +E  +   + +V
Sbjct: 797 AVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIV 856

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYARH 640
           D+ S  G +  A  F + MP+    S W S++ G   H
Sbjct: 857 DLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIH 894



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 141/518 (27%), Positives = 231/518 (44%), Gaps = 32/518 (6%)

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA--VGNGLVNMYAKCGTIDDSRSVFRFMIG 319
           VV + G        +  H  L+R+G   ++   +G  LV  Y KCG +  +R VF  M  
Sbjct: 100 VVQLCGEERSLEAARRAHA-LVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPP 158

Query: 320 K--DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
           +  D   W +++S   + G ++E +  F  M+  G+     ++   L   ASLG I  G+
Sbjct: 159 RVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGE 218

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
            IHG   KLGL    +V+NAL++LY+  G +   ++VF  M   D +SWNS I  +  S 
Sbjct: 219 VIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYF-SN 277

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV-----AN 492
                AV  +  M   G   + VT +++L A +      +G  VH   +K  +     + 
Sbjct: 278 GWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESV 337

Query: 493 ETTIENALLS----CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNL 548
           ++ I+ AL S     Y KCG+M    ++F  M  + +   WN ++ GY       +++ L
Sbjct: 338 QSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLL 397

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
              M + G   D    + +L     ++    G+  H   V+        + +AL+  Y+K
Sbjct: 398 FEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAK 457

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
              ID A   FD MP ++  SWNS+ISG   +G   +A+ LF +M + G   D  T + V
Sbjct: 458 SNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSV 517

Query: 669 LSACSHA-----GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           L AC+ +     G V  G+      S   GLI +    + ++D+     +     +    
Sbjct: 518 LPACARSHYWFVGRVVHGY------SVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRN 571

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM 761
           M    N + W  ++ +  RA      L  K A +L EM
Sbjct: 572 MA-QKNVVSWTAMITSYTRAG-----LFDKVAGLLQEM 603



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 139/585 (23%), Positives = 257/585 (43%), Gaps = 86/585 (14%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           ++D  + H  ++K GF     +CN LI+ Y +   + +A  +FD MP ++++SW  ++SG
Sbjct: 426 ARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISG 485

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKF-GMQVHCLVLKSNQ 119
            T  G+++EA ++F  M   G  L+   L SVL AC     S + F G  VH   +K+  
Sbjct: 486 CTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACAR---SHYWFVGRVVHGYSVKTGL 542

Query: 120 TFDGLVSNVLIAMYGSCLE--STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
             +  ++N L+ MY +C +  ST+   +IF  +  ++++SW ++I+ Y++ G    V  L
Sbjct: 543 IGETSLANALLDMYSNCSDWHSTN---QIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGL 599

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVG 234
              M  +G    +KP+ +   S++        +G   L+Q   +     + G+   L V 
Sbjct: 600 LQEMVLDG----IKPDVFAVTSVLHG-----FAGDESLKQGKSVHGYAIRNGMEKLLPVA 650

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------------------- 272
           +AL+  +    N   AR +F+ +  K+++S N L+ G                       
Sbjct: 651 NALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQFKP 710

Query: 273 ------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                              +G+E+H Y +R G  +     N LV+MY KCG +  +R +F
Sbjct: 711 NTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLF 770

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             +  K+ +SW  MI+G   +GC ++A+  F  MR  G+     S  + L +C   G   
Sbjct: 771 DRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTA 830

Query: 375 LGQQIHGEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI-G 431
            G +      K   ++  +     ++ L +  G L    +    MP E D   W S++ G
Sbjct: 831 EGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHG 890

Query: 432 AFADSEALVSEAVK---YYLDMRRAGWSPNGVTFINILAAASSF-SMGKLGHQVHAQVIK 487
                +  ++E V    + L+    G+    V   NI A A  + ++ KL +++  + ++
Sbjct: 891 CRIHRDVKLAEKVADRVFKLEPENTGYY---VLLANIYAEAERWEAVKKLKNKIGGRGLR 947

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
            N                 C  ++   K+   +++ R+   WN +
Sbjct: 948 ENTG---------------CSWIEVRGKVHVFIADNRNHPEWNRI 977



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 6/166 (3%)

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLE--FDVVIGSALVDMYSKCGRIDYASRFFD 620
           ++  V+  C    +LE     HA  VRA        V+G  LV  Y KCG +  A   FD
Sbjct: 96  SYCAVVQLCGEERSLEAARRAHAL-VRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFD 154

Query: 621 LMPVR--NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLV 678
            MP R  +V  W S++S YA+ G   + ++LF QM+  G  PD      VL   +  G +
Sbjct: 155 EMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSI 214

Query: 679 DEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
            EG +    + +  GL       + ++ L  R G ++   +  + M
Sbjct: 215 TEG-EVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSM 259


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 279/682 (40%), Positives = 400/682 (58%), Gaps = 40/682 (5%)

Query: 272 RRKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
           R  G  V G+ I++G +   V+VG  L++M+A+ G +  +R VF  ++ +  V W  MI+
Sbjct: 163 RSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMIT 222

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
              Q GC  +A+  F  M  DG     +++ S +S+CA  G   LGQQ+H   L+LGL S
Sbjct: 223 RYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVS 282

Query: 391 DVSVSNALLSLYAD---AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
           D  VS  L+ +Y        +    KVF  MP H+ +SW ++I  +       + AV+  
Sbjct: 283 DTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELL 342

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
            +M      PN +T+ ++L A ++ S    G Q+HA+V+K ++ N   + NAL+S Y + 
Sbjct: 343 CEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAES 402

Query: 508 GEMDDCEKIFARMSER-------------RDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
           G M++  K F ++ ER             R   SW+S I                   M 
Sbjct: 403 GCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSSQIES-----------------MD 445

Query: 555 RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
            G  +  FTFA++LSA A+V    +G ++HA  ++   E D  I ++LV MYS+CG +D 
Sbjct: 446 VG--VSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDD 503

Query: 615 ASRFFDLMPV-RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
           A R FD M    NV SW S+IS  A+HGH ++AL+LF  M L G  P+ VT++ VLSACS
Sbjct: 504 ACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACS 563

Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
           H GLV EG ++F+SM + + LIP++E ++CMVDLL R+G + +  EFIN+MP   ++L+W
Sbjct: 564 HVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVW 623

Query: 734 RTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMK 793
           +T+LGAC        E+G  AA  + ++EPQ+   YVLL+N+YA GG W++VA+ R  M+
Sbjct: 624 KTLLGAC--RTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMR 681

Query: 794 EAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALF 853
              + KE G SW+ + + +H F AGD SHP    IY KL  L ++++D GYVP T   L 
Sbjct: 682 HRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDIGYVPDTSIVLH 741

Query: 854 DLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREI 912
           D+  + KE  +  HSEKIAVAF ++T     PIRI KNLRVC DCHSA K+ISK  GREI
Sbjct: 742 DMSDKLKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKNLRVCADCHSAIKYISKSTGREI 801

Query: 913 VLRDSNRFHHFNDGKCSCGDYW 934
           +LRDSNRFH   DGKCSCG+YW
Sbjct: 802 ILRDSNRFHRMKDGKCSCGEYW 823



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 244/491 (49%), Gaps = 53/491 (10%)

Query: 12  LKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEA 70
           +K GF   DV +   LI+++ R GDL +A K+F+ + +R  V W  +++ Y   G + +A
Sbjct: 174 IKTGFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKA 233

Query: 71  CKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLI 130
            ++F  M+  GF  + Y + S++ AC E G +G   G Q+H LVL+     D  VS  L+
Sbjct: 234 VELFLGMLEDGFEPDGYTMSSMVSACAEQGSAG--LGQQLHSLVLRLGLVSDTCVSCGLV 291

Query: 131 AMYGSCL--ESTDCARRIFEEIETRDLISWNSIISVYSQ-RGDTISVFKLFSRMQREGFR 187
            MY      +S +CAR++F+ + T +++SW ++IS Y Q  G   +  +L   M  E   
Sbjct: 292 DMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNE--- 348

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
            S++PN  T+ SL+ A  +  LS     +QI A V K  + +   VG+ALVS +A  G  
Sbjct: 349 -SIEPNHLTYSSLLKACAN--LSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCM 405

Query: 248 YYARKIFEQMIQKNVVSMNGLM--EGR--------------------------------- 272
             ARK F+Q+ ++N++S +  +   GR                                 
Sbjct: 406 EEARKAFDQLYERNLLSTSSDIGETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGL 465

Query: 273 -RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV-SWNTMIS 330
             KG+++H   I++G      + N LV+MY++CG +DD+   F  M    +V SW ++IS
Sbjct: 466 PTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIIS 525

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLD 389
            L ++G  E A+  F  M   G+  ++ + I+ LS+C+ +G +  G++      K   L 
Sbjct: 526 ALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLI 585

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEAL-VSE-AVKY 446
             +     ++ L A +G +   L+    MP + D + W +++GA    E + + E A ++
Sbjct: 586 PRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARH 645

Query: 447 YLDMRRAGWSP 457
            +D+     +P
Sbjct: 646 VIDLEPQDPAP 656



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 167/671 (24%), Positives = 287/671 (42%), Gaps = 125/671 (18%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPD-RNSVSWACIVSGYTHKGMSNEACKMFKEM 77
           D  + N+L+ +Y + G + +A ++FD M   R+ VSW  +    T  G   EA  +  EM
Sbjct: 78  DALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEM 137

Query: 78  VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN-QTFDGLVSNVLIAMYGSC 136
           + +G   N + L +   AC   G      G  V    +K+     D  V   LI M+   
Sbjct: 138 LESGLRPNAFTLCAAAHACFP-GELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARN 196

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
            +    AR++F  +  R ++ W  +I+ Y Q G      +LF  M  +GF    +P+ YT
Sbjct: 197 GDLV-AARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGF----EPDGYT 251

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL---GNFYYARKI 253
             S+++A      +G  L QQ+ ++V + GL+SD  V   LV  + +L    +   ARK+
Sbjct: 252 MSSMVSACAEQGSAG--LGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKV 309

Query: 254 FEQMIQKNVVSMNGLMEG------------------------------------------ 271
           F++M   NV+S   L+ G                                          
Sbjct: 310 FKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSD 369

Query: 272 RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM-------------- 317
           +  G+++H  ++++ + ++  VGN LV+MYA+ G ++++R  F  +              
Sbjct: 370 QDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGE 429

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
            G+ + SW++ I  +D                   +  S F+  S LS+ A++G    GQ
Sbjct: 430 TGRSNASWSSQIESMD-------------------VGVSTFTFASLLSAAATVGLPTKGQ 470

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADS 436
           Q+H   +K G +SD  +SN+L+S+Y+  GYL    + F  M  +H+ +SW S+I A A  
Sbjct: 471 QLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALA-K 529

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
                 A+  + DM  +G  PN VT+I +L+A S   + K G +                
Sbjct: 530 HGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKE---------------- 573

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
                  Y +  + D   ++  RM        +  M+     + L+ +A+    F+ +  
Sbjct: 574 -------YFRSMQKD--HRLIPRMEH------YACMVDLLARSGLVQEALE---FINEMP 615

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
            + D   + T+L AC +   +E G E+ A  V      D      L ++Y+  G  D  +
Sbjct: 616 CKADALVWKTLLGACRTYENIEIG-EIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVA 674

Query: 617 RFFDLMPVRNV 627
           R   LM  RN+
Sbjct: 675 RIRSLMRHRNL 685



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 140/505 (27%), Positives = 245/505 (48%), Gaps = 19/505 (3%)

Query: 275 GKEVHGYLIRSGLFDMVA-VGNGLVNMYAKCGTIDDSRSVFRFMIG-KDSVSWNTMISGL 332
           G+ +H  L+ + + D  A V N L+ MY+KCG +  +R VF  M G +D VSW  M   L
Sbjct: 62  GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCL 121

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML--GQQIHGEGLKLGL-D 389
            +NG  +EA++    M   GL  + F+L +   +C   G +    G  + G  +K G   
Sbjct: 122 TRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFP-GELFRSSGGTVLGFAIKTGFWG 180

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           +DVSV  AL+ ++A  G L    KVF  + E   V W  +I  +        +AV+ +L 
Sbjct: 181 TDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQG-GCAGKAVELFLG 239

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC-- 507
           M   G+ P+G T  ++++A +      LG Q+H+ V++  + ++T +   L+  Y K   
Sbjct: 240 MLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQM 299

Query: 508 -GEMDDCEKIFARMSERRDEVSWNSMISGYIH-NELLPKAMNLVWFMMQRGQRLDHFTFA 565
              M+   K+F RM    + +SW ++ISGY+        A+ L+  M+      +H T++
Sbjct: 300 EQSMECARKVFKRMPT-HNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYS 358

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           ++L ACA+++  + G ++HA  ++  +    V+G+ALV MY++ G ++ A + FD +  R
Sbjct: 359 SLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYER 418

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
           N+ S +S I    R        +  SQ++         TF  +LSA +  GL  +G +  
Sbjct: 419 NLLSTSSDIGETGRSN-----ASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKG-QQL 472

Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANC 745
            ++S   G        + +V +  R G LD      ++M    N + W +++ A  +   
Sbjct: 473 HALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGH 532

Query: 746 RKTELGRKAANMLFEMEPQNAVNYV 770
            +  L      +L  ++P N V Y+
Sbjct: 533 AERALSLFHDMILSGVKP-NDVTYI 556



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 153/362 (42%), Gaps = 49/362 (13%)

Query: 477 LGHQVHAQVIKYNVAN-ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           LG  +H +++   V + +  + N+LL+ Y KCG +    ++F  M   RD VSW +M   
Sbjct: 61  LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF- 594
              N    +A+ L+  M++ G R + FT      AC     L R       G      F 
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFP-GELFRSSGGTVLGFAIKTGFW 179

Query: 595 --DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
             DV +G AL+DM+++ G +  A + F+ +  R V  W  MI+ Y + G   KA+ LF  
Sbjct: 180 GTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLG 239

Query: 653 MKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP---------------Q 697
           M  DG  PD  T   ++SAC+  G    G +   S+    GL+                Q
Sbjct: 240 MLEDGFEPDGYTMSSMVSACAEQGSAGLG-QQLHSLVLRLGLVSDTCVSCGLVDMYTKLQ 298

Query: 698 LEQ-FSCMVDLLGR-------------------AGELDKIEEFINKM---PITPNSLIWR 734
           +EQ   C   +  R                    G+ +   E + +M    I PN L + 
Sbjct: 299 MEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYS 358

Query: 735 TVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV--LLANMYASGGKWEDVAKARKAM 792
           ++L AC  AN    + GR+    + +    N VN V   L +MYA  G  E+  KA   +
Sbjct: 359 SLLKAC--ANLSDQDSGRQIHARVMKTSIGN-VNVVGNALVSMYAESGCMEEARKAFDQL 415

Query: 793 KE 794
            E
Sbjct: 416 YE 417



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 15/201 (7%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H +++K        + N L+++Y   G +  A K FD++ +RN +S +   S     
Sbjct: 374 RQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTS---SDIGET 430

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG-PSGFKFGMQVHCLVLKSNQTFDG 123
           G SN +     E +  G  ++ +   S+L A    G P+    G Q+H L +K+    D 
Sbjct: 431 GRSNASWSSQIESMDVG--VSTFTFASLLSAAATVGLPTK---GQQLHALSIKTGFESDK 485

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIET-RDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            +SN L++MY  C    D A R F+E+E   ++ISW SIIS  ++ G       LF  M 
Sbjct: 486 GISNSLVSMYSRC-GYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMI 544

Query: 183 REGFRYSLKPNEYTFGSLITA 203
             G    +KPN+ T+ ++++A
Sbjct: 545 LSG----VKPNDVTYIAVLSA 561



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 1/95 (1%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD-RNSVSWACIVSGYTHKG 65
            H   +K GF  D  + N+L+++Y R G L  A + FDEM D  N +SW  I+S     G
Sbjct: 472 LHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHG 531

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            +  A  +F +M+ +G   N     +VL AC   G
Sbjct: 532 HAERALSLFHDMILSGVKPNDVTYIAVLSACSHVG 566


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 274/731 (37%), Positives = 422/731 (57%), Gaps = 9/731 (1%)

Query: 206 SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY-YARKIFEQMIQKNVVS 264
           +S +   +LL++  +   K  +L     G   +  F+ L N +    K+ +     +++ 
Sbjct: 28  TSSIGDVFLLKEYFSPSNKHFVLE----GVEEIISFSFLKNLFGSGHKLSDTKTVAHLIQ 83

Query: 265 MNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                +   KGK++H  LIR G      + N  +N+Y+KCG +D +  +F  M  ++ VS
Sbjct: 84  TYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVS 143

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W ++I+G   N  ++EA+ +FC MR +G +++ F+L S L +C SLG I  G Q+H   +
Sbjct: 144 WTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVV 203

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           K G   ++ V + L  +Y+  G LS   K F  MP  D V W S+I  F  +     +A+
Sbjct: 204 KCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDF-KKAL 262

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
             Y+ M       +     + L+A S+      G  +HA ++K     ET I NAL   Y
Sbjct: 263 TAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMY 322

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            K G+M     +F   S+    VS  ++I GY+  + + KA++    + +RG   + FTF
Sbjct: 323 SKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTF 382

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
            +++ ACA+ A LE G ++H   V+   + D  + S LVDMY KCG  D++ + FD +  
Sbjct: 383 TSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIEN 442

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
            +  +WN+++  +++HG G  A+  F+ M   G  P+ VTFV +L  CSHAG+V++G  +
Sbjct: 443 PDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNY 502

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           F SM ++YG++P+ E +SC++DLLGRAG+L + E+FIN MP  PN   W + LGAC    
Sbjct: 503 FSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHG 562

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
               E  + AA+ L ++EP+N+  +VLL+N+YA   +WEDV   RK +K+  + K  G S
Sbjct: 563 --DMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYS 620

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLV 864
           WV +++  HVF   D SHP+K  IYEKL  L  +++  GYVPQT+  L D++   KE L+
Sbjct: 621 WVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEKLL 680

Query: 865 SYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
            YHSE+IAVAF +LT  + +PI + KNLRVC DCHSA KFISK+  R I++RD +RFHHF
Sbjct: 681 HYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVTERNIIVRDISRFHHF 740

Query: 924 NDGKCSCGDYW 934
           ++G CSCGDYW
Sbjct: 741 SNGSCSCGDYW 751



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 220/501 (43%), Gaps = 68/501 (13%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  +++ G   + FL N  +N+Y + G+L    KLFD+M  RN VSW  I++G+ H
Sbjct: 94  GKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAH 153

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                EA   F +M   G +  ++AL SVL+AC   G    +FG QVHCLV+K     + 
Sbjct: 154 NSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLG--AIQFGTQVHCLVVKCGFGCEL 211

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V + L  MY  C E +D A + FEE+  +D + W S+I  + + GD       + +M  
Sbjct: 212 FVGSNLTDMYSKCGELSD-ACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVT 270

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           +     +  +++   S ++A   S L  S   + + A + K G   + ++G+AL   +++
Sbjct: 271 D----DVFIDQHVLCSTLSAC--SALKASSFGKSLHATILKLGFEYETFIGNALTDMYSK 324

Query: 244 LGNFYYARKIFEQMIQKN---VVSMNGLMEG-----------------RRKGKE------ 277
            G+   A  +F+  I  +   +VS+  +++G                 RR+G E      
Sbjct: 325 SGDMVSASNVFQ--IHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTF 382

Query: 278 ------------------VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                             +HG +++        V + LV+MY KCG  D S  +F  +  
Sbjct: 383 TSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIEN 442

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
            D ++WNT++    Q+G    AI  F  M   GL  +  + ++ L  C+  G +  G   
Sbjct: 443 PDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNY 502

Query: 380 HGEGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSE 437
                K+ G+       + ++ L   AG L         MP E +   W S +G      
Sbjct: 503 FSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLG------ 556

Query: 438 ALVSEAVKYYLDMRRAGWSPN 458
                A K + DM RA ++ +
Sbjct: 557 -----ACKIHGDMERAKFAAD 572



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 120/543 (22%), Positives = 223/543 (41%), Gaps = 95/543 (17%)

Query: 45  EMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGF 104
           ++ D  +V  A ++  Y      N+  ++   ++R G L N +                 
Sbjct: 71  KLSDTKTV--AHLIQTYARTKELNKGKQLHAMLIRGGCLPNTF----------------- 111

Query: 105 KFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISV 164
                               +SN  + +Y  C E  D   ++F+++  R+++SW SII+ 
Sbjct: 112 --------------------LSNHFLNLYSKCGE-LDYTIKLFDKMSQRNMVSWTSIITG 150

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
           ++           F +M+ EG        ++   S++ A  S  L       Q+  +V K
Sbjct: 151 FAHNSRFQEALSSFCQMRIEG----EIATQFALSSVLQACTS--LGAIQFGTQVHCLVVK 204

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---------- 274
            G   +L+VGS L   +++ G    A K FE+M  K+ V    +++G  K          
Sbjct: 205 CGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTA 264

Query: 275 -------------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
                                          GK +H  +++ G      +GN L +MY+K
Sbjct: 265 YMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSK 324

Query: 304 CGTIDDSRSVFRFMIGKDS---VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
            G +  + +VF+  I  D    VS   +I G  +    E+A+  F  +RR G+  + F+ 
Sbjct: 325 SGDMVSASNVFQ--IHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTF 382

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
            S + +CA+   +  G Q+HG+ +K     D  VS+ L+ +Y   G     +++F  +  
Sbjct: 383 TSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIEN 442

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            D+++WN+++G F+    L   A++ +  M   G  PN VTF+N+L   S   M + G  
Sbjct: 443 PDEIAWNTLVGVFS-QHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLN 501

Query: 481 VHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIH 538
             + + K Y V  +    + ++   G+ G++ + E     M    +   W S +    IH
Sbjct: 502 YFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIH 561

Query: 539 NEL 541
            ++
Sbjct: 562 GDM 564


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 284/821 (34%), Positives = 450/821 (54%), Gaps = 86/821 (10%)

Query: 193 NEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
           N  T+G +I   A       G  + +Q+     + GL  D+Y+G++L++ +++ G+    
Sbjct: 77  NSNTYGCIIEHCAKLRRFEDGKMVHKQL----DELGLAIDIYLGNSLINFYSKFGDVASV 132

Query: 251 RKIFEQMIQKNVVSMNGLM------------------------EGRR------------- 273
            ++F +M  ++VV+ + ++                        E  R             
Sbjct: 133 EQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNY 192

Query: 274 ----KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
               K +E+H  +  SG+   VAV   L+ MY+KCG I  +  +F+ M  ++ VSW  +I
Sbjct: 193 SMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAII 252

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
               Q+    EA   +  M + G+  +  + +S L+SC +   +  G++IH    + GL+
Sbjct: 253 QANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLE 312

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA-----DSEALVSEAV 444
           +DV V+NAL+++Y     +    + F  M + D +SW+++I  +A     D E+L  E  
Sbjct: 313 TDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESL-DEVF 371

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
           +    MRR G  PN VTF++IL A S     + G Q+HA++ K    ++ +++ A+ + Y
Sbjct: 372 QLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMY 431

Query: 505 GKCGEMDDCEKIFARMSER------------------------------RDEVSWNSMIS 534
            KCG + + E++F++M  +                              R+ VSWN MI+
Sbjct: 432 AKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIA 491

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           GY  +  + K   L+  M   G + D  T  ++L AC +++ LERG  VHA  V+  LE 
Sbjct: 492 GYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLES 551

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           D V+ ++L+ MYSKCG +  A   FD +  R+  +WN+M++GY +HG G +A+ LF +M 
Sbjct: 552 DTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRML 611

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
            +   P+ +TF  V+SAC  AGLV EG + F+ M + + + P  + + CMVDLLGRAG L
Sbjct: 612 KERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRL 671

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
            + EEFI +MP  P+  +W  +LGAC   +    +L   AA+ +  +EP NA  YV L+N
Sbjct: 672 QEAEEFIQRMPCEPDISVWHALLGACKSHD--NVQLAEWAAHHILRLEPSNASVYVTLSN 729

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           +YA  G+W+D  K RK M +  +KK+ G S + +   +H FVA D +HPE D I+ +L+ 
Sbjct: 730 IYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEM 789

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRV 893
           L ++M++AGY P  +F L D++   KE  + +HSEK+A+A+ L +     PIRIMKNLRV
Sbjct: 790 LTKEMKEAGYTPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRV 849

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CGDCH+A KFISKI  REIV RD+NRFH+F +G CSCGD+W
Sbjct: 850 CGDCHTATKFISKIRKREIVARDANRFHYFKNGTCSCGDFW 890



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 166/618 (26%), Positives = 290/618 (46%), Gaps = 74/618 (11%)

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGK 276
           Q+L ++K+ GLL +      ++   A+L  F                           GK
Sbjct: 64  QLLGIIKQRGLLVNSNTYGCIIEHCAKLRRF-------------------------EDGK 98

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
            VH  L   GL   + +GN L+N Y+K G +     VFR M  +D V+W++MI+    N 
Sbjct: 99  MVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNN 158

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
              +A   F  M+   +  +  + +S L +C +   +   ++IH      G+++DV+V+ 
Sbjct: 159 HPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVAT 218

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           AL+++Y+  G +S   ++F  M E + VSW ++I A A    L +EA + Y  M +AG S
Sbjct: 219 ALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKL-NEAFELYEKMLQAGIS 277

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           PN VTF+++L + ++      G ++H+ + +  +  +  + NAL++ Y KC  + D  + 
Sbjct: 278 PNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARET 337

Query: 517 FARMSERRDEVSWNSMISGYIHN-----ELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
           F RMS +RD +SW++MI+GY  +     E L +   L+  M + G   +  TF ++L AC
Sbjct: 338 FDRMS-KRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKAC 396

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRI------------------- 612
           +    LE+G ++HA   +   E D  + +A+ +MY+KCG I                   
Sbjct: 397 SVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWA 456

Query: 613 ------------DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
                         A + F  M  RNV SWN MI+GYA+ G   K   L S MK++G  P
Sbjct: 457 SLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQP 516

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           D VT + +L AC     ++ G K   + +   GL       + ++ +  + GE+ +    
Sbjct: 517 DRVTIISILEACGALSALERG-KLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTV 575

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAAN----MLFEMEPQNAVNYVLLANMY 776
            +K+    +++ W  +L     A   +  +G +A +    ML E  P N + +  + +  
Sbjct: 576 FDKIS-NRDTVAWNAML-----AGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISAC 629

Query: 777 ASGGKWEDVAKARKAMKE 794
              G  ++  +  + M+E
Sbjct: 630 GRAGLVQEGREIFRIMQE 647



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 149/539 (27%), Positives = 267/539 (49%), Gaps = 47/539 (8%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           + A+  H  +   G   DV +   LI +Y + G+++ A ++F +M +RN VSW  I+   
Sbjct: 196 EKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQAN 255

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                 NEA +++++M++AG   N     S+L +C    P     G ++H  + +     
Sbjct: 256 AQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNT--PEALNRGRRIHSHISERGLET 313

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG--DTIS---VFK 176
           D +V+N LI MY  C    D AR  F+ +  RD+ISW+++I+ Y+Q G  D  S   VF+
Sbjct: 314 DVVVANALITMYCKCNCIQD-ARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQ 372

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
           L  RM+REG    + PN+ TF S++ A   SV       +QI A + K G  SD  + +A
Sbjct: 373 LLERMRREG----VFPNKVTFMSILKAC--SVHGALEQGRQIHAEISKVGFESDRSLQTA 426

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
           + + +A+ G+ Y A ++F +M  KNVV+   L+                           
Sbjct: 427 IFNMYAKCGSIYEAEQVFSKMENKNVVAWASLL--------------------------- 459

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
              MY KCG +  +  VF  M  ++ VSWN MI+G  Q+G   +      +M+ +G    
Sbjct: 460 --TMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPD 517

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
             ++IS L +C +L  +  G+ +H E +KLGL+SD  V+ +L+ +Y+  G ++    VF 
Sbjct: 518 RVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFD 577

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            +   D V+WN+++  +     +  EAV  +  M +    PN +TF  +++A     + +
Sbjct: 578 KISNRDTVAWNAMLAGYG-QHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQ 636

Query: 477 LGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            G ++  ++++ +   +   ++   ++   G+ G + + E+   RM    D   W++++
Sbjct: 637 EGREIF-RIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALL 694



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 239/457 (52%), Gaps = 17/457 (3%)

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G  +EAI     +++ GL+ ++ +    +  CA L     G+ +H +  +LGL  D+ + 
Sbjct: 57  GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           N+L++ Y+  G ++   +VF  M   D V+W+S+I A+A +    ++A   +  M+ A  
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNH-PAKAFDTFERMKDANI 175

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            PN +TF++IL A +++SM +   ++H  V    +  +  +  AL++ Y KCGE+    +
Sbjct: 176 EPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACE 235

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           IF +M E R+ VSW ++I     +  L +A  L   M+Q G   +  TF ++L++C +  
Sbjct: 236 IFQKMKE-RNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPE 294

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            L RG  +H+      LE DVV+ +AL+ MY KC  I  A   FD M  R+V SW++MI+
Sbjct: 295 ALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIA 354

Query: 636 GYARHGHGDK-----ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           GYA+ G+ DK        L  +M+ +G  P+ VTF+ +L ACS  G +++G +    +S+
Sbjct: 355 GYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISK 414

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
           V G        + + ++  + G + + E+  +KM    N + W ++L    +     +  
Sbjct: 415 V-GFESDRSLQTAIFNMYAKCGSIYEAEQVFSKME-NKNVVAWASLLTMYIKCGDLTS-- 470

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
              A  +  EM  +N V++ L+   YA  G   D+AK
Sbjct: 471 ---AEKVFSEMSTRNVVSWNLMIAGYAQSG---DIAK 501


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 297/836 (35%), Positives = 452/836 (54%), Gaps = 58/836 (6%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A ++F+E   +D+  +N ++  +S+         LF  +   G    L  +  T    + 
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSG----LGVDGLTLSCALK 112

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
                VL    + +Q+     K+G L D+ VG++LV  + +  +F   R IF++M  KNV
Sbjct: 113 VC--GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV 170

Query: 263 VSMNGLMEGRRK-----------------------------------------GKEVHGY 281
           VS   L+ G  +                                         G +VH  
Sbjct: 171 VSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAM 230

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           ++++G      V N L+ MY K   + D+ +VF  M+ +DSV+WN MI G    G Y E 
Sbjct: 231 IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG 290

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
              F  MR  G+  S     + L  C+    +   +Q+H   +K G +    +  AL+  
Sbjct: 291 FQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVT 350

Query: 402 YADAGYLSRCLKVFFLM-PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           Y+    +    K+F +    H+ V+W ++IG F  +     +AV  +  M R G  PN  
Sbjct: 351 YSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNN-NEKAVDLFCQMSREGVRPNHF 409

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           T+  +LA   S     L  Q+HAQ+IK       ++  ALL  Y K G + +  ++F  +
Sbjct: 410 TYSTVLAGKPS----SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSI 465

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS-VATLER 579
             + D V+W++M++G        KAM +   +++ G + + +TF++V++AC+S  AT+E 
Sbjct: 466 PAK-DIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEH 524

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G ++HA  V++     + + SAL+ MYSK G I+ A + F     R++ SWNSMI+GY +
Sbjct: 525 GKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQ 584

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
           HG   KAL +F  M+  G   D VTF+GVL+AC+HAGLV+EG K+F  M + Y +  ++E
Sbjct: 585 HGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIE 644

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            +SCMVDL  RAG  DK  + IN MP   +  IWRT+L A CR + R  ELG+ AA  L 
Sbjct: 645 HYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAA-CRVH-RNLELGKLAAEKLV 702

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
            ++P +AV YVLL+N++A  G WE+ A  RK M E +VKKEAGCSW+ +K+ +  F+AGD
Sbjct: 703 SLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGD 762

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLT 878
            SHP  DL+Y KL+EL+ K++D GY P T +   D+E E KE ++S HSE++A+A+ ++ 
Sbjct: 763 VSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIA 822

Query: 879 RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
                PI+I KNLR+CGDCH+  + IS I  R +++RDSNRFHHF  G CSCG YW
Sbjct: 823 LPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  236 bits (601), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 178/637 (27%), Positives = 307/637 (48%), Gaps = 75/637 (11%)

Query: 39  ASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQE 98
           A +LFDE P ++   +  ++  ++      EA  +FK++  +G  ++   L   L+ C  
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC-- 114

Query: 99  CGPSGFKF----GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRD 154
               G  F    G QVHC  LKS    D  V   L+ MY    +  D  R IF+E+  ++
Sbjct: 115 ----GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFED-GRGIFDEMGIKN 169

Query: 155 LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSY 213
           ++SW S++S Y++ G    V  L ++MQ EG    + PN +TF +++ A A  S++ G  
Sbjct: 170 VVSWTSLLSGYARNGLNDEVIHLINQMQMEG----VNPNGFTFATVLGALADESIIEGGV 225

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-- 271
              Q+ AM+ K G     +V +AL+  + +      A  +F+ M+ ++ V+ N ++ G  
Sbjct: 226 ---QVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYA 282

Query: 272 ---------------RRKG------------------------KEVHGYLIRSGLFDMVA 292
                          R  G                        K++H  ++++G      
Sbjct: 283 AIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQD 342

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFM-IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           +   L+  Y+KC ++D++  +F       + V+W  MI G  QN   E+A+  FC M R+
Sbjct: 343 IRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSRE 402

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G+  ++F+  + L+   S     L  Q+H + +K   +   SV+ ALL  Y   G +   
Sbjct: 403 GVRPNHFTYSTVLAGKPS----SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVES 458

Query: 412 LKVFFLMPEHDQVSWNSVIGAFA---DSEALVSEAVKYYLDMRRAGWSPNGVTFINIL-A 467
            +VF+ +P  D V+W++++   A   DSE    +A++ ++ + + G  PN  TF +++ A
Sbjct: 459 ARVFYSIPAKDIVAWSAMLTGLAQTRDSE----KAMEVFIQLVKEGVKPNEYTFSSVINA 514

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
            +SS +  + G Q+HA  +K   +N   + +ALL+ Y K G ++  EK+F R  E RD V
Sbjct: 515 CSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTR-QEERDIV 573

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           SWNSMI+GY  +    KA+ +   M  +G  LD  TF  VL+AC     +E G +     
Sbjct: 574 SWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIM 633

Query: 588 VRAC-LEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           ++   ++  +   S +VD+YS+ G  D A    + MP
Sbjct: 634 IKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMP 670



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 144/562 (25%), Positives = 263/562 (46%), Gaps = 38/562 (6%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q LK GF  DV +  +L+++Y++  D      +FDEM  +N VSW  ++SGY   G++
Sbjct: 127 HCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLN 186

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           +E   +  +M   G   N +   +VL A  +   S  + G+QVH +++K+   F   V N
Sbjct: 187 DEVIHLINQMQMEGVNPNGFTFATVLGALAD--ESIIEGGVQVHAMIVKNGFEFTTFVCN 244

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI MY    E    A  +F+ +  RD ++WN +I  Y+  G  +  F++F RM+  G +
Sbjct: 245 ALICMYLKS-EMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVK 303

Query: 188 YS--------------------------LKPNEYTFGSLITAAYSSVLSGSYLLQQILAM 221
            S                          +  N Y F   I  A     S    + +   +
Sbjct: 304 LSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKL 363

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLMEGRRKG-- 275
              A    ++   +A++ GF +  N   A  +F QM    ++ N  + + ++ G+     
Sbjct: 364 FSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL 423

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
            ++H  +I++    + +V   L++ Y K G + +S  VF  +  KD V+W+ M++GL Q 
Sbjct: 424 SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQT 483

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC-ASLGWIMLGQQIHGEGLKLGLDSDVSV 394
              E+A+  F  + ++G+  + ++  S +++C +S   +  G+QIH   +K G  + + V
Sbjct: 484 RDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCV 543

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           S+ALL++Y+  G +    KVF    E D VSWNS+I  +        +A++ +  M+  G
Sbjct: 544 SSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYG-QHGDAKKALEVFQIMQNQG 602

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDC 513
              + VTFI +L A +   + + G +    +IK Y++  +    + ++  Y + G  D  
Sbjct: 603 LPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKA 662

Query: 514 EKIFARMSERRDEVSWNSMISG 535
             I   M        W ++++ 
Sbjct: 663 MDIINGMPFPASPTIWRTLLAA 684



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 157/326 (48%), Gaps = 27/326 (8%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVSGY 61
            K  H  ++K+G+ +   +   L+  Y +   +  A KLF  M D   N V+W  ++ G+
Sbjct: 325 TKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFS-MADAAHNVVTWTAMIGGF 383

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                + +A  +F +M R G   N +   +VL       PS      Q+H  ++K+    
Sbjct: 384 VQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAG----KPSSLL--SQLHAQIIKAYYEK 437

Query: 122 DGLVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              V+  L+  Y   G+ +ES     R+F  I  +D+++W+++++  +Q  D+    ++F
Sbjct: 438 VPSVATALLDAYVKTGNVVESA----RVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVF 493

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
            ++ +EG    +KPNEYTF S+I A  SS  +  +  +QI A   K+G  + L V SAL+
Sbjct: 494 IQLVKEG----VKPNEYTFSSVINACSSSAATVEHG-KQIHATAVKSGKSNALCVSSALL 548

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVA 292
           + +++ GN   A K+F +  ++++VS N ++ G       +K  EV   +   GL     
Sbjct: 549 TMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDV 608

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMI 318
              G++      G +++    F  MI
Sbjct: 609 TFIGVLTACTHAGLVEEGEKYFNIMI 634


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 272/661 (41%), Positives = 392/661 (59%), Gaps = 5/661 (0%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            K+VH  +I+S +     V N L+++Y +CG + ++R VF  ++ K   SWN MI+G  +
Sbjct: 47  AKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVE 106

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +   E+A+  F  M  +G+  +  + +  L +CASL  +  G+++H      GL+SDV V
Sbjct: 107 HKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRV 166

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             ALL +Y   G ++   ++F  +  HD +SW  +IGA+A S     EA +  L M + G
Sbjct: 167 GTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQS-GNGKEAYRLMLQMEQEG 225

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
           + PN +T+++IL A +S    K   +VH   +   +  +  +  AL+  Y K G +DD  
Sbjct: 226 FKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDAR 285

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
            +F RM + RD VSWN MI  +  +    +A +L   M   G + D   F ++L+ACAS 
Sbjct: 286 VVFDRM-KVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASA 344

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
             LE   ++H   + + LE DV +G+ALV MYSK G ID A   FD M VRNV SWN+MI
Sbjct: 345 GALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMI 404

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
           SG A+HG G  AL +F +M   G  PD VTFV VLSACSHAGLVDEG   + +M+QVYG+
Sbjct: 405 SGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGI 464

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
            P +   +CMVDLLGRAG L + + FI+ M + P+   W  +LG+C        ELG   
Sbjct: 465 EPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSC--RTYGNVELGELV 522

Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
           A    +++P+NA  YVLL+N+YA  GKW+ V+  R  M+E  ++KE G SW+ + + +H 
Sbjct: 523 AKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHD 582

Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVA 874
           F+  D SHPE   I E   ++ +K++  GY+P T+  L +   + KE  +  HSEK+A+ 
Sbjct: 583 FLVADSSHPECKEINESKDKVIEKIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIV 642

Query: 875 FVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
           + L       PIR+ KNLRVC DCH A K ISK+ GREI++RD+NRFHHF DG CSCGDY
Sbjct: 643 YGLMHTPPGNPIRVFKNLRVCTDCHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDY 702

Query: 934 W 934
           W
Sbjct: 703 W 703



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 207/398 (52%), Gaps = 4/398 (1%)

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           EAI+      + GL++ +F  +  L  C     +M  +Q+H   +K  ++ +  V N LL
Sbjct: 11  EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
            +Y + G L     VF  + +    SWN++I  + + +    +A++ + +M   G  PN 
Sbjct: 71  HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKH-AEDAMRLFREMCHEGVQPNA 129

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
            T++ IL A +S S  K G +VHA +    + ++  +  ALL  YGKCG +++  +IF  
Sbjct: 130 GTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDN 189

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           +    D +SW  MI  Y  +    +A  L+  M Q G + +  T+ ++L+ACAS   L+ 
Sbjct: 190 LMN-HDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKW 248

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
              VH   + A LE DV +G+ALV MY+K G ID A   FD M VR+V SWN MI  +A 
Sbjct: 249 VKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAE 308

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
           HG G +A  LF QM+ +G  PD + F+ +L+AC+ AG + E  K     +   GL   + 
Sbjct: 309 HGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGAL-EWVKKIHRHALDSGLEVDVR 367

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
             + +V +  ++G +D      ++M +  N + W  ++
Sbjct: 368 VGTALVHMYSKSGSIDDARVVFDRMKVR-NVVSWNAMI 404



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/473 (29%), Positives = 235/473 (49%), Gaps = 54/473 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  I+K     +  + N L++VY+  G L  A  +FD +  ++  SW  +++GY  
Sbjct: 47  AKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVE 106

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
              + +A ++F+EM   G   N      +L+AC     S  K+G +VH  +       D 
Sbjct: 107 HKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASL--SALKWGKEVHACIRHGGLESDV 164

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V   L+ MYG C  S + ARRIF+ +   D+ISW  +I  Y+Q G+    ++L  +M++
Sbjct: 165 RVGTALLRMYGKC-GSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQ 223

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           EGF    KPN  T+ S++ A  S        ++++      AGL  D+ VG+ALV  +A+
Sbjct: 224 EGF----KPNAITYVSILNACASE--GALKWVKRVHRHALDAGLELDVRVGTALVQMYAK 277

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLM---------------------EGRRKG------- 275
            G+   AR +F++M  ++VVS N ++                     EG +         
Sbjct: 278 SGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSI 337

Query: 276 -------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                        K++H + + SGL   V VG  LV+MY+K G+IDD+R VF  M  ++ 
Sbjct: 338 LNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNV 397

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           VSWN MISGL Q+G  ++A+  F  M   G+     + ++ LS+C+  G +  G+  +  
Sbjct: 398 VSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLA 457

Query: 383 GLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFF--LMPEHDQVSWNSVIGA 432
             ++ G++ DVS  N ++ L   AG L    K+F   +  + D+ +W +++G+
Sbjct: 458 MTQVYGIEPDVSHCNCMVDLLGRAGRLMEA-KLFIDNMAVDPDEATWGALLGS 509



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 224/450 (49%), Gaps = 20/450 (4%)

Query: 220 AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL----------M 269
           A+VKK+G        +A+++G+    +   A ++F +M  + V    G           +
Sbjct: 88  ALVKKSGA-----SWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASL 142

Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
              + GKEVH  +   GL   V VG  L+ MY KCG+I+++R +F  ++  D +SW  MI
Sbjct: 143 SALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMI 202

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
               Q+G  +EA      M ++G   +  + +S L++CAS G +   +++H   L  GL+
Sbjct: 203 GAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLE 262

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
            DV V  AL+ +YA +G +     VF  M   D VSWN +IGAFA+      EA   +L 
Sbjct: 263 LDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAE-HGRGHEAYDLFLQ 321

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M+  G  P+ + F++IL A +S    +   ++H   +   +  +  +  AL+  Y K G 
Sbjct: 322 MQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGS 381

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           +DD   +F RM + R+ VSWN+MISG   + L   A+ +   M   G + D  TF  VLS
Sbjct: 382 IDDARVVFDRM-KVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLS 440

Query: 570 ACASVATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV-RNV 627
           AC+    ++ G   +    +   +E DV   + +VD+  + GR+  A  F D M V  + 
Sbjct: 441 ACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDE 500

Query: 628 YSWNSMISGYARHGHGD-KALTLFSQMKLD 656
            +W +++     +G+ +   L    ++KLD
Sbjct: 501 ATWGALLGSCRTYGNVELGELVAKERLKLD 530



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 196/417 (47%), Gaps = 26/417 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  I   G   DV +   L+ +Y + G +  A ++FD + + + +SW  ++  Y
Sbjct: 146 KWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAY 205

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   EA ++  +M + GF  N     S+L AC   G    K+  +VH   L +    
Sbjct: 206 AQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEG--ALKWVKRVHRHALDAGLEL 263

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V   L+ MY     S D AR +F+ ++ RD++SWN +I  +++ G     + LF +M
Sbjct: 264 DVRVGTALVQMYAKS-GSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQM 322

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           Q EG     KP+   F S++ A  S+       +++I      +GL  D+ VG+ALV  +
Sbjct: 323 QTEG----CKPDAIMFLSILNACASA--GALEWVKKIHRHALDSGLEVDVRVGTALVHMY 376

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------RKGKEVHGYLIRSGLFDMVAVGN 295
           ++ G+   AR +F++M  +NVVS N ++ G       +   EV   +   G+        
Sbjct: 377 SKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFV 436

Query: 296 GLVNMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
            +++  +  G +D+ RS +  M     I  D    N M+  L + G   EA +    M  
Sbjct: 437 AVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAV 496

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAG 406
           D   ++  +L   L SC + G + LG+ +  E LK  LD   + +  LLS +YA+AG
Sbjct: 497 DPDEATWGAL---LGSCRTYGNVELGELVAKERLK--LDPKNAATYVLLSNIYAEAG 548



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 126/247 (51%), Gaps = 13/247 (5%)

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
           L +A+ ++   +QRG   D F +  VL  C     L    +VH C +++ +E +  + + 
Sbjct: 9   LSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNN 68

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+ +Y +CGR+  A   FD +  ++  SWN+MI+GY  H H + A+ LF +M  +G  P+
Sbjct: 69  LLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPN 128

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
             T++ +L AC+    +  G K   +  +  GL   +   + ++ + G+ G +++     
Sbjct: 129 AGTYMIILKACASLSALKWG-KEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIF 187

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ----NAVNYVLLANMYA 777
           + + +  + + W  ++GA  ++       G++A  ++ +ME +    NA+ YV + N  A
Sbjct: 188 DNL-MNHDIISWTVMIGAYAQSGN-----GKEAYRLMLQMEQEGFKPNAITYVSILNACA 241

Query: 778 SGG--KW 782
           S G  KW
Sbjct: 242 SEGALKW 248


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 312/824 (37%), Positives = 464/824 (56%), Gaps = 60/824 (7%)

Query: 131 AMYGSCLESTDC-------ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           ++  SC+ + D        AR I  +IE  D + +NS+IS+YS+ GD+     +F  M+R
Sbjct: 67  SLLKSCIRARDFRLGKLVHARLIEFDIEP-DSVLYNSLISLYSKSGDSAKAEDVFETMRR 125

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVK--KAGLLSDLYVGSALVSGF 241
            G R      +    S + A Y +       L  I   V+  + GL+ + Y  +A++   
Sbjct: 126 FGKR------DVVSWSAMMACYGN---NGRELDAIKVFVEFLELGLVPNDYCYTAVIRAC 176

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNM 300
           +                  + V +         G+   G+L+++G F+  V VG  L++M
Sbjct: 177 S----------------NSDFVGV---------GRVTLGFLMKTGHFESDVCVGCSLIDM 211

Query: 301 YAKC-GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
           + K   + +++  VF  M   + V+W  MI+   Q G   EAI  F  M   G  S  F+
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA---GYLSRCLKVFF 416
           L S  S+CA L  + LG+Q+H   ++ GL  DV  S  L+ +YA     G +  C KVF 
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCRKVFD 329

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW-SPNGVTFINILAAASSFSMG 475
            M +H  +SW ++I  +  +  L +EA+  + +M   G   PN  TF +   A  + S  
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           ++G QV  Q  K  +A+ +++ N+++S + K   M+D ++ F  +SE+ + VS+N+ + G
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLDG 448

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
              N    +A  L+  + +R   +  FTFA++LS  A+V ++ +G ++H+  V+  L  +
Sbjct: 449 TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCN 508

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
             + +AL+ MYSKCG ID ASR F+ M  RNV SW SMI+G+A+HG   + L  F+QM  
Sbjct: 509 QPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIE 568

Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD 715
           +G  P+ VT+V +LSACSH GLV EG++HF SM + + + P++E ++CMVDLL RAG L 
Sbjct: 569 EGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLT 628

Query: 716 KIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANM 775
              EFIN MP   + L+WRT LGA CR +   TELG+ AA  + E++P     Y+ L+N+
Sbjct: 629 DAFEFINTMPFQADVLVWRTFLGA-CRVH-SNTELGKLAARKILELDPNEPAAYIQLSNI 686

Query: 776 YASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKEL 835
           YA  GKWE+  + R+ MKE  + KE GCSW+ + D +H F  GD +HP    IY++L  L
Sbjct: 687 YACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRL 746

Query: 836 NQKMRDAGYVPQTKFALFDLEPESKED----LVSYHSEKIAVAFVLTRNSK-LPIRIMKN 890
             +++  GYVP T   L  LE E+ E     L+  HSEKIAVAF L   SK  P+R+ KN
Sbjct: 747 ITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKN 806

Query: 891 LRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           LRVCGDCH+A K+IS + GREIVLRD NRFHHF DGKCSC DYW
Sbjct: 807 LRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 225/477 (47%), Gaps = 71/477 (14%)

Query: 11  ILKHG-FAYDVFLCNTLINVYVR-VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSN 68
           ++K G F  DV +  +LI+++V+      +A K+FD+M + N V+W  +++     G   
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251

Query: 69  EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV 128
           EA + F +MV +GF  +++ L SV  AC E        G Q+H   ++S     GLV +V
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAEL--ENLSLGKQLHSWAIRS-----GLVDDV 304

Query: 129 ---LIAMYGSCLE--STDCARRIFEEIETRDLISWNSIISVYSQRGD-TISVFKLFSRMQ 182
              L+ MY  C    S D  R++F+ +E   ++SW ++I+ Y +  +       LFS M 
Sbjct: 305 ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMI 364

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            +G    ++PN +TF S   A  +  LS   + +Q+L    K GL S+  V ++++S F 
Sbjct: 365 TQG---HVEPNHFTFSSAFKACGN--LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFV 419

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------------ 272
           +      A++ FE + +KN+VS N  ++G                               
Sbjct: 420 KSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFAS 479

Query: 273 -----------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                      RKG+++H  +++ GL     V N L++MY+KCG+ID +  VF FM  ++
Sbjct: 480 LLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRN 539

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA-----SLGWIMLG 376
            +SW +MI+G  ++G     +  F  M  +G+  +  + ++ LS+C+     S GW    
Sbjct: 540 VISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFN 599

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                  +K  ++        ++ L   AG L+   +    MP + D + W + +GA
Sbjct: 600 SMYEDHKIKPKMEHYA----CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 240/516 (46%), Gaps = 61/516 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP---DRNSVSWACIVSGY 61
           KL H ++++     D  L N+LI++Y + GD A A  +F+ M     R+ VSW+ +++ Y
Sbjct: 82  KLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACY 141

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-T 120
            + G   +A K+F E +  G + N Y   +V+RAC      G   G      ++K+    
Sbjct: 142 GNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG--VGRVTLGFLMKTGHFE 199

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D  V   LI M+     S + A ++F+++   ++++W  +I+   Q G      + F  
Sbjct: 200 SDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLD 259

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M   GF    + +++T  S+ +A   + L    L +Q+ +   ++GL+ D  V  +LV  
Sbjct: 260 MVLSGF----ESDKFTLSSVFSAC--AELENLSLGKQLHSWAIRSGLVDD--VECSLVDM 311

Query: 241 FARL---GNFYYARKIFEQMIQKNVVSMNGLMEG-------------------------- 271
           +A+    G+    RK+F++M   +V+S   L+ G                          
Sbjct: 312 YAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEP 371

Query: 272 -----------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                             R GK+V G   + GL    +V N +++M+ K   ++D++  F
Sbjct: 372 NHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAF 431

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             +  K+ VS+NT + G  +N  +E+A      +    L  S F+  S LS  A++G I 
Sbjct: 432 ESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIR 491

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
            G+QIH + +KLGL  +  V NAL+S+Y+  G +    +VF  M   + +SW S+I  FA
Sbjct: 492 KGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFA 551

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
                    ++ +  M   G  PN VT++ IL+A S
Sbjct: 552 -KHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 586



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 55/99 (55%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H Q++K G + +  +CN LI++Y + G + +AS++F+ M +RN +SW  +++G+
Sbjct: 491 RKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGF 550

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G +    + F +M+  G   N     ++L AC   G
Sbjct: 551 AKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 589


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 307/957 (32%), Positives = 490/957 (51%), Gaps = 101/957 (10%)

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           G  H G+ NEA K++      G   ++    +V +AC        K   Q H    +   
Sbjct: 15  GIPH-GLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAA-SRDALKVK-QFHDDATRCGV 71

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D  + N  I  YG C +  + ARR+F+++  RD+++WNS+ + Y   G       +F 
Sbjct: 72  MSDVSIGNAFIHAYGKC-KCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFR 130

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ------QILAMVKKAGLLSDLYV 233
           +M        +K N  T         SS+L G   LQ      +I   V + G++ D++V
Sbjct: 131 KMGLN----KVKANPLTV--------SSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFV 178

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL------------------------- 268
            SA V+ +A+      A+ +F+ M  ++VV+ N L                         
Sbjct: 179 SSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGV 238

Query: 269 ----------------MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
                           ++  + GK +HG+ ++ G+ + V V N LVN+Y  C  + ++++
Sbjct: 239 KPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQA 298

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           VF  M  ++ ++WN++ S     G  ++ +  F  M  +G+     ++ S L +C+ L  
Sbjct: 299 VFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKD 358

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
           +  G+ IHG  +K G+  DV V  AL++LYA+   +     VF LMP  + V+WNS+   
Sbjct: 359 LKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSC 418

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN 492
           + +      + +  + +M   G  P+ VT ++IL A S     K G  +H   +++ +  
Sbjct: 419 YVNC-GFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVE 477

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERR---------------------------- 524
           +  + NALLS Y KC  + + + +F  +  R                             
Sbjct: 478 DVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMN 537

Query: 525 ------DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
                 DE++W+ +I G + N  + +AM +   M   G + D  T  ++L AC+    L 
Sbjct: 538 RDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLR 597

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
            G E+H    R   ++D+   +ALVDMY+KCG +  +   FD+MP+++V+SWN+MI    
Sbjct: 598 MGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANG 657

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
            HG+G +AL+LF +M L    PD  TF  VLSACSH+ LV+EG + F SMS+ + + P+ 
Sbjct: 658 MHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEA 717

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
           E ++C+VD+  RAG L++   FI +MP+ P ++ W+  L   CR   +  EL + +A  L
Sbjct: 718 EHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAG-CRVY-KNVELAKISAKKL 775

Query: 759 FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
           FE++P  + NYV L N+  +   W + +K RK MKE  + K  GCSW  + + VH FVAG
Sbjct: 776 FEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAG 835

Query: 819 DESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VL 877
           D+S+ E D IY  L EL  K++ AGY P T + L D++ E K + +  HSEK+AVAF +L
Sbjct: 836 DKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAFGIL 895

Query: 878 TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             N +  IR+ KNLR+CGDCH+A K++S +VG  IV+RDS RFHHF +G CSC D+W
Sbjct: 896 NLNGQSTIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952



 Score =  226 bits (576), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 178/716 (24%), Positives = 322/716 (44%), Gaps = 90/716 (12%)

Query: 1   SKDA---KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACI 57
           S+DA   K FH    + G   DV + N  I+ Y +   +  A ++FD++  R+ V+W  +
Sbjct: 53  SRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSL 112

Query: 58  VSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
            + Y + G   +   +F++M       N   + S+L  C +      K G ++H  V++ 
Sbjct: 113 SACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDL--QDLKSGKEIHGFVVRH 170

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
               D  VS+  +  Y  CL   + A+ +F+ +  RD+++WNS+ S Y   G       +
Sbjct: 171 GMVEDVFVSSAFVNFYAKCLCVRE-AQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNV 229

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F  M  +G    +KP+  T   +++A   S L      + I     K G++ +++V +AL
Sbjct: 230 FREMVLDG----VKPDPVTVSCILSAC--SDLQDLKSGKAIHGFALKHGMVENVFVSNAL 283

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGL----------------------------- 268
           V+ +        A+ +F+ M  +NV++ N L                             
Sbjct: 284 VNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDP 343

Query: 269 ------------MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                       ++  + GK +HG+ ++ G+ + V V   LVN+YA C  + ++++VF  
Sbjct: 344 MAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDL 403

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M  ++ V+WN++ S     G  ++ +  F  M  +G+     +++S L +C+ L  +  G
Sbjct: 404 MPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSG 463

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF--- 433
           + IHG  ++ G+  DV V NALLSLYA    +     VF L+P  +  SWN ++ A+   
Sbjct: 464 KVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTN 523

Query: 434 -------------------ADS------------EALVSEAVKYYLDMRRAGWSPNGVTF 462
                              AD              + + EA++ +  M+  G+ P+  T 
Sbjct: 524 KEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTI 583

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
            +IL A S     ++G ++H  V ++    +    NAL+  Y KCG +     +F  M  
Sbjct: 584 YSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMP- 642

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
            +D  SWN+MI     +    +A++L   M+    + D  TF  VLSAC+    +E G++
Sbjct: 643 IKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQ 702

Query: 583 VHACGVRACL-EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISG 636
           +     R  L E +    + +VD+YS+ G ++ A  F   MP+     +W + ++G
Sbjct: 703 IFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAG 758



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 159/330 (48%), Gaps = 8/330 (2%)

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA 491
           +F     L +EA+K Y   R  G  P+   F+ +  A ++        Q H    +  V 
Sbjct: 13  SFGIPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVM 72

Query: 492 NETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWF 551
           ++ +I NA +  YGKC  ++   ++F  +  R D V+WNS+ + Y++     + +N+   
Sbjct: 73  SDVSIGNAFIHAYGKCKCVEGARRVFDDLVAR-DVVTWNSLSACYVNCGFPQQGLNVFRK 131

Query: 552 MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR 611
           M     + +  T +++L  C+ +  L+ G E+H   VR  +  DV + SA V+ Y+KC  
Sbjct: 132 MGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLC 191

Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
           +  A   FDLMP R+V +WNS+ S Y   G   K L +F +M LDG  PD VT   +LSA
Sbjct: 192 VREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSA 251

Query: 672 CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
           CS    +  G K     +  +G++  +   + +V+L      + + +   + MP   N +
Sbjct: 252 CSDLQDLKSG-KAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMP-HRNVI 309

Query: 732 IWRTVLGACCRANCRKTELGRKAANMLFEM 761
            W ++  A C  NC      +K  N+  EM
Sbjct: 310 TWNSL--ASCYVNC---GFPQKGLNVFREM 334


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 289/718 (40%), Positives = 436/718 (60%), Gaps = 20/718 (2%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMI-----QKNVVSMNGLMEGRRK---GKEVHGY 281
           D+Y  ++++S + R G+F  A   F Q++     Q +  +   +++  +    G+++H +
Sbjct: 138 DVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVDGRKIHCW 197

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           + + G    V V   L++MY++ G +  +RS+F  M  +D  SWN MISGL QNG   +A
Sbjct: 198 VFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQA 257

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +     MR +G+   + ++ S L  CA LG I     IH   +K GL+ ++ VSNAL+++
Sbjct: 258 LDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINM 317

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           YA  G L    KVF  M   D VSWNS+I A+  ++  V+ A  ++  M+  G  P+ +T
Sbjct: 318 YAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVT-ARGFFFKMQLNGLEPDLLT 376

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANE-TTIENALLSCYGKCGEMDDCEKIFARM 520
            +++ + A+     K    VH  +++     E   I NA++  Y K G +D   K+F  +
Sbjct: 377 LVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVF-NL 435

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ--RGQRLDHFTFATVLSACASVATLE 578
              +D VSWN++ISGY  N L  +A+  V+ MM+  R  +L+  T+ ++L+A A V  L+
Sbjct: 436 IPVKDVVSWNTLISGYTQNGLASEAIE-VYRMMEECREIKLNQGTWVSILAAYAHVGALQ 494

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
           +GM +H   ++  L  DV +G+ L+D+Y KCGR+  A   F  +P  +   WN++IS + 
Sbjct: 495 QGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHG 554

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
            HGHG+KAL LF +M+ +G  PDHVTF+ +LSACSH+GLVDEG K F  + Q YG+ P L
Sbjct: 555 IHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEG-KWFFHLMQEYGIKPSL 613

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANM 757
           + + CMVDLLGRAG L+   +FI  MP+ P++ IW  +LGAC    N    ELG+ A++ 
Sbjct: 614 KHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGN---IELGKFASDR 670

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           LFE++ +N   YVLL+N+YA+ GKWE V K R   +E  +KK  G S + +   V +F  
Sbjct: 671 LFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYT 730

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-V 876
           G++SHP+   IY +L+ L  KM+  GY+P   F L D+E + KE +++ HSE++A+AF +
Sbjct: 731 GNQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGI 790

Query: 877 LTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           ++   K  IRI KNLRVCGDCH+A KFIS+I  REIV+RDS RFHHF +G CSCGDYW
Sbjct: 791 ISTPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 159/578 (27%), Positives = 266/578 (46%), Gaps = 65/578 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  ++  G     F+   L+N+Y  +GD++ +   FD++  ++  +W  ++S Y  
Sbjct: 92  AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVR 151

Query: 64  KGMSNEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            G   EA   F +++    F  + Y    VL+ACQ         G ++HC V K    +D
Sbjct: 152 NGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD-----GRKIHCWVFKLGFQWD 206

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V+  LI MY S       AR +F+++  RD+ SWN++IS   Q G+      +   M+
Sbjct: 207 VFVAASLIHMY-SRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMR 265

Query: 183 REGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            EG    +  +  T  S++   A    +S + L+      V K GL  +L+V +AL++ +
Sbjct: 266 LEG----INMDSVTVASILPVCAQLGDISTATLIH---LYVIKHGLEFELFVSNALINMY 318

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG------------------------------ 271
           A+ GN   A+K+F+QM  ++VVS N ++                                
Sbjct: 319 AKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLV 378

Query: 272 -----------RRKGKEVHGYLIRSG-LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                       +  + VHG+++R G L + V +GN +++MYAK G ID +  VF  +  
Sbjct: 379 SLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPV 438

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF-SLISTLSSCASLGWIMLGQQ 378
           KD VSWNT+ISG  QNG   EAI  +  M     +  N  + +S L++ A +G +  G +
Sbjct: 439 KDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMR 498

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI---GAFAD 435
           IHG  +K  L  DV V   L+ LY   G L   + +F+ +P    V WN++I   G    
Sbjct: 499 IHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGH 558

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
            E    +A+K + +M+  G  P+ VTFI++L+A S   +   G      + +Y +     
Sbjct: 559 GE----KALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLK 614

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
               ++   G+ G ++        M    D   W +++
Sbjct: 615 HYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALL 652



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 159/547 (29%), Positives = 264/547 (48%), Gaps = 33/547 (6%)

Query: 254 FEQMIQKNVVSMNGLMEGRRK---GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDS 310
           + Q  +   +  N L +   K    K +H  L+ SG      +   LVN+YA  G +  S
Sbjct: 68  WRQPAKNEEIDFNSLFDSCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLS 127

Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF-SLISTLSSCAS 369
           R  F  +  KD  +WN+MIS   +NG + EAI  F  +       ++F +    L +C +
Sbjct: 128 RGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQT 187

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           L   + G++IH    KLG   DV V+ +L+ +Y+  G++     +F  MP  D  SWN++
Sbjct: 188 L---VDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAM 244

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           I     +    ++A+    +MR  G + + VT  +IL   +          +H  VIK+ 
Sbjct: 245 ISGLIQN-GNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHG 303

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV 549
           +  E  + NAL++ Y K G + D +K+F +M   RD VSWNS+I+ Y  N+    A    
Sbjct: 304 LEFELFVSNALINMYAKFGNLGDAQKVFQQMF-LRDVVSWNSIIAAYEQNDDPVTARGFF 362

Query: 550 WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV-RACLEFDVVIGSALVDMYSK 608
           + M   G   D  T  ++ S  A     +    VH   + R  L   VVIG+A++DMY+K
Sbjct: 363 FKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAK 422

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP-DHVTFVG 667
            G ID A + F+L+PV++V SWN++ISGY ++G   +A+ ++  M+    +  +  T+V 
Sbjct: 423 LGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVS 482

Query: 668 VLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF--SCMVDLLGRAGELDKIEEFINKMP 725
           +L+A +H G + +G +    + +       L+ F  +C++DL G+ G L        ++P
Sbjct: 483 ILAAYAHVGALQQGMRIHGHLIKTN---LHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVP 539

Query: 726 ITPNSLIWRTVLGACCRANCRKTE-LGRKAANMLFEME-----PQNAVNYVLLANMYASG 779
              +S+ W  ++      +C      G KA  +  EM+     P +     LL+    SG
Sbjct: 540 -RESSVPWNAII------SCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSG 592

Query: 780 ----GKW 782
               GKW
Sbjct: 593 LVDEGKW 599



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 225/474 (47%), Gaps = 53/474 (11%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D +  H  + K GF +DVF+  +LI++Y R G +  A  LFD+MP R+  SW  ++SG  
Sbjct: 190 DGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLI 249

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G + +A  +  EM   G  ++   + S+L  C + G         +H  V+K    F+
Sbjct: 250 QNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLG--DISTATLIHLYVIKHGLEFE 307

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             VSN LI MY       D A+++F+++  RD++SWNSII+ Y Q  D ++    F +MQ
Sbjct: 308 LFVSNALINMYAKFGNLGD-AQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQ 366

Query: 183 REGFRYSLKPNEYTFGSLIT-AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             G    L+P+  T  SL + AA S     S  +   +  +++  L+  + +G+A++  +
Sbjct: 367 LNG----LEPDLLTLVSLASIAAQSRDYKNSRSVHGFI--MRRGWLMEAVVIGNAVMDMY 420

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------------------------- 272
           A+LG    A K+F  +  K+VVS N L+ G                              
Sbjct: 421 AKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTW 480

Query: 273 -------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                        ++G  +HG+LI++ L   V VG  L+++Y KCG + D+  +F  +  
Sbjct: 481 VSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPR 540

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           + SV WN +IS    +G  E+A+  F  M+ +G+   + + IS LS+C+  G +  G+  
Sbjct: 541 ESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWF 600

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
                + G+   +     ++ L   AG+L         MP H   S W +++GA
Sbjct: 601 FHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGA 654



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 164/340 (48%), Gaps = 24/340 (7%)

Query: 2   KDAKLFHLQILKHGFAYD-VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           K+++  H  I++ G+  + V + N ++++Y ++G + SA K+F+ +P ++ VSW  ++SG
Sbjct: 391 KNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISG 450

Query: 61  YTHKGMSNEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           YT  G+++EA ++++ M     + LN+    S+L A    G    + GM++H  ++K+N 
Sbjct: 451 YTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVG--ALQQGMRIHGHLIKTNL 508

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D  V   LI +YG C    D A  +F ++     + WN+IIS +   G      KLF 
Sbjct: 509 HLDVFVGTCLIDLYGKCGRLVD-AMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFR 567

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSAL 237
            MQ EG    +KP+  TF SL++A   S L   G +       ++++ G+   L     +
Sbjct: 568 EMQDEG----VKPDHVTFISLLSACSHSGLVDEGKWFFH----LMQEYGIKPSLKHYGCM 619

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGN 295
           V    R G    A    + M      S+ G + G  R  G    G      LF++ +   
Sbjct: 620 VDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENV 679

Query: 296 G----LVNMYAKCGT---IDDSRSVFRFMIGKDSVSWNTM 328
           G    L N+YA  G    +D  RS+ R    K +  W+++
Sbjct: 680 GYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSI 719


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 269/712 (37%), Positives = 419/712 (58%), Gaps = 17/712 (2%)

Query: 235 SALVSGFARLGNFYYARKIFEQMI----QKNVVSMNGLME------GRRKGKEVHGYLIR 284
           +AL++G+A++G+   A  +F QM+    + ++++   +++      G   GKEVH  ++ 
Sbjct: 127 NALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVT 186

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
           +G      +G  LV+MY K G++DD+R VF  +  +D  ++N M+ G  ++G +E+A   
Sbjct: 187 AGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFEL 246

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F  M++ GL  +  S +S L  C +   +  G+ +H + +  GL  D+ V+ +L+ +Y  
Sbjct: 247 FYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTT 306

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
            G +    +VF  M   D VSW  +I  +A++   + +A   +  M+  G  P+ +T+++
Sbjct: 307 CGSIEGARRVFDNMKVRDVVSWTVMIEGYAEN-GNIEDAFGLFATMQEEGIQPDRITYMH 365

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           I+ A +  +      ++H+QV       +  +  AL+  Y KCG + D  ++F  M  RR
Sbjct: 366 IMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMP-RR 424

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
           D VSW++MI  Y+ N    +A      M +     D  T+  +L+AC  +  L+ GME++
Sbjct: 425 DVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIY 484

Query: 585 ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGD 644
              ++A L   V +G+AL+ M +K G ++ A   FD M  R+V +WN+MI GY+ HG+  
Sbjct: 485 TQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAR 544

Query: 645 KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCM 704
           +AL LF +M  +   P+ VTFVGVLSACS AG VDEG + F  + +  G++P ++ + CM
Sbjct: 545 EALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCM 604

Query: 705 VDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEP 763
           VDLLGRAGELD+ E  I  MP+ P S IW ++L AC    N    ++  +AA     ++P
Sbjct: 605 VDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNL---DVAERAAERCLMIDP 661

Query: 764 QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHP 823
            +   YV L++MYA+ G WE+VAK RK M+   ++KE GC+W+ +   VH FV  D SHP
Sbjct: 662 YDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHP 721

Query: 824 EKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSK 882
               IY +L  L   ++  GY+P T+  L D+  + KE+ +SYHSEK+A+A+ VL+  S 
Sbjct: 722 LVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSG 781

Query: 883 LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            PIRI KNLRVC DCHSA KFISK+ GREI+ RD++RFHHF DG CSCGDYW
Sbjct: 782 TPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASRFHHFKDGVCSCGDYW 833



 Score =  239 bits (609), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 241/465 (51%), Gaps = 4/465 (0%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK+V  ++I+ G    +   N L+ +Y+ CG + ++R +F  +  K  V+WN +I+G  Q
Sbjct: 76  GKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQ 135

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G  +EA   F  M  +GL  S  + +S L +C+S   +  G+++H + +  G  SD  +
Sbjct: 136 VGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRI 195

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             AL+S+Y   G +    +VF  +   D  ++N ++G +A S     +A + +  M++ G
Sbjct: 196 GTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDW-EKAFELFYRMQQVG 254

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             PN ++F++IL    +      G  VHAQ +   + ++  +  +L+  Y  CG ++   
Sbjct: 255 LKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGAR 314

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           ++F  M + RD VSW  MI GY  N  +  A  L   M + G + D  T+  +++ACA  
Sbjct: 315 RVFDNM-KVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAIS 373

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
           A L    E+H+    A    D+++ +ALV MY+KCG I  A + FD MP R+V SW++MI
Sbjct: 374 ANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMI 433

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
             Y  +G+G +A   F  MK     PD VT++ +L+AC H G +D G + +    +   L
Sbjct: 434 GAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKA-DL 492

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           +  +   + ++ +  + G +++     + M +  + + W  ++G 
Sbjct: 493 VSHVPLGNALIIMNAKHGSVERARYIFDTM-VRRDVITWNAMIGG 536



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 156/575 (27%), Positives = 278/575 (48%), Gaps = 53/575 (9%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
            I++ G   +++  NTLI +Y   G++  A ++FD + ++  V+W  +++GY   G   E
Sbjct: 82  HIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKE 141

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
           A  +F++MV  G   +     SVL AC    P+G  +G +VH  V+ +    D  +   L
Sbjct: 142 AFALFRQMVDEGLEPSIITFLSVLDACSS--PAGLNWGKEVHAQVVTAGFVSDFRIGTAL 199

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           ++MY     S D AR++F+ +  RD+ ++N ++  Y++ GD    F+LF RMQ+ G    
Sbjct: 200 VSMYVKG-GSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVG---- 254

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
           LKPN+ +F S++   ++         + + A    AGL+ D+ V ++L+  +   G+   
Sbjct: 255 LKPNKISFLSILDGCWTP--EALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEG 312

Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRK----------------------------------- 274
           AR++F+ M  ++VVS   ++EG  +                                   
Sbjct: 313 ARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAI 372

Query: 275 ------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
                  +E+H  +  +G    + V   LV+MYAKCG I D+R VF  M  +D VSW+ M
Sbjct: 373 SANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAM 432

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           I    +NG   EA   F  M+R  +     + I+ L++C  LG + +G +I+ + +K  L
Sbjct: 433 IGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADL 492

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
            S V + NAL+ + A  G + R   +F  M   D ++WN++IG ++       EA+  + 
Sbjct: 493 VSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYS-LHGNAREALYLFD 551

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKC 507
            M +  + PN VTF+ +L+A S       G +    +++   +     +   ++   G+ 
Sbjct: 552 RMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRA 611

Query: 508 GEMDDCEKIFARMSERRDEVSWNS-MISGYIHNEL 541
           GE+D+ E +   M  +     W+S +++  IH  L
Sbjct: 612 GELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNL 646



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 194/381 (50%), Gaps = 4/381 (1%)

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           + +     C  L    LG+Q+    ++ G   ++   N L+ LY+  G ++   ++F  +
Sbjct: 59  TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSV 118

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
                V+WN++I  +A     V EA   +  M   G  P+ +TF+++L A SS +    G
Sbjct: 119 ENKTVVTWNALIAGYAQV-GHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWG 177

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
            +VHAQV+     ++  I  AL+S Y K G MDD  ++F  +   RD  ++N M+ GY  
Sbjct: 178 KEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGL-HIRDVSTFNVMVGGYAK 236

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
           +    KA  L + M Q G + +  +F ++L  C +   L  G  VHA  + A L  D+ +
Sbjct: 237 SGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRV 296

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            ++L+ MY+ CG I+ A R FD M VR+V SW  MI GYA +G+ + A  LF+ M+ +G 
Sbjct: 297 ATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGI 356

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
            PD +T++ +++AC+ +  ++   +   S   + G    L   + +V +  + G +    
Sbjct: 357 QPDRITYMHIMNACAISANLNHA-REIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDAR 415

Query: 719 EFINKMPITPNSLIWRTVLGA 739
           +  + MP   + + W  ++GA
Sbjct: 416 QVFDAMP-RRDVVSWSAMIGA 435



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 229/473 (48%), Gaps = 54/473 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H Q++  GF  D  +   L+++YV+ G +  A ++FD +  R+  ++  +V GY  
Sbjct: 177 GKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAK 236

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   +A ++F  M + G   N+ +  S+L  C    P    +G  VH   + +    D 
Sbjct: 237 SGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWT--PEALAWGKAVHAQCMNAGLVDDI 294

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V+  LI MY +C  S + ARR+F+ ++ RD++SW  +I  Y++ G+    F LF+ MQ 
Sbjct: 295 RVATSLIRMYTTC-GSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQE 353

Query: 184 EGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           EG    ++P+  T+  ++ A A S+ L+ +   ++I + V  AG  +DL V +ALV  +A
Sbjct: 354 EG----IQPDRITYMHIMNACAISANLNHA---REIHSQVDIAGFGTDLLVSTALVHMYA 406

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRK----------- 274
           + G    AR++F+ M +++VVS + ++                   +R            
Sbjct: 407 KCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYIN 466

Query: 275 -------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                        G E++   I++ L   V +GN L+ M AK G+++ +R +F  M+ +D
Sbjct: 467 LLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRD 526

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            ++WN MI G   +G   EA+  F  M ++    ++ + +  LS+C+  G++  G++   
Sbjct: 527 VITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFT 586

Query: 382 EGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
             L+  G+   V +   ++ L   AG L     +   MP     S W+S++ A
Sbjct: 587 YLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVA 639


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 297/836 (35%), Positives = 451/836 (53%), Gaps = 58/836 (6%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A ++F+E   +D+  +N ++  +S+         LF  +   G    L  +  T    + 
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSG----LGVDGLTLSCALK 112

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
                VL    + +Q+     K+G L D+ VG++LV  + +  +F   R IF++M  KNV
Sbjct: 113 VC--GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV 170

Query: 263 VSMNGLMEGRRK-----------------------------------------GKEVHGY 281
           VS   L+ G  +                                         G +VH  
Sbjct: 171 VSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAM 230

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           ++++G      V N L+ MY K   + D+ +VF  M+ +DSV+WN MI G    G Y E 
Sbjct: 231 IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG 290

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
              F  MR  G+  S     + L  C+    +   +Q+H   +K G +    +  AL+  
Sbjct: 291 FQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVT 350

Query: 402 YADAGYLSRCLKVFFLM-PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           Y+    +    K+F +    H+ V+W ++IG F  +     +AV  +  M R G  PN  
Sbjct: 351 YSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNN-NKKAVDLFCQMSREGVRPNHF 409

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           T+  +LA   S     L  Q+HAQ+IK       ++  ALL  Y K G + +  ++F  +
Sbjct: 410 TYSTVLAGKPS----SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSI 465

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS-VATLER 579
             + D V+W++M++G        KAM +   +++ G + + +TF++V++AC+S  AT+E 
Sbjct: 466 PAK-DIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEH 524

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G ++HA  V++     + + SAL+ MYSK G I+ A + F     R++ SWNSMI+GY +
Sbjct: 525 GKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQ 584

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
           HG   KAL +F  M+  G   D VTF+GVL+AC+HAGLV+EG K+F  M + Y +  + E
Sbjct: 585 HGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXE 644

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            +SCMVDL  RAG  DK  + IN MP   +  IWRT+L A CR + R  ELG+ AA  L 
Sbjct: 645 HYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAA-CRVH-RNLELGKLAAEKLV 702

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
            ++P +AV YVLL+N++A  G WE+ A  RK M E +VKKEAGCSW+ +K+ +  F+AGD
Sbjct: 703 SLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGD 762

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLT 878
            SHP  DL+Y KL+EL+ K++D GY P T +   D+E E KE ++S HSE++A+A+ ++ 
Sbjct: 763 VSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIA 822

Query: 879 RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
                PI+I KNLR+CGDCH+  + IS I  R +++RDSNRFHHF  G CSCG YW
Sbjct: 823 LPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 177/637 (27%), Positives = 306/637 (48%), Gaps = 75/637 (11%)

Query: 39  ASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQE 98
           A +LFDE P ++   +  ++  ++      EA  +FK++  +G  ++   L   L+ C  
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC-- 114

Query: 99  CGPSGFKF----GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRD 154
               G  F    G QVHC  LKS    D  V   L+ MY    +  D  R IF+E+  ++
Sbjct: 115 ----GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFED-GRGIFDEMGIKN 169

Query: 155 LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSY 213
           ++SW S++S Y++ G    V  L ++MQ EG    + PN +TF +++ A A  S++ G  
Sbjct: 170 VVSWTSLLSGYARNGLNDEVIHLINQMQMEG----VNPNGFTFATVLGALADESIIEGGV 225

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-- 271
              Q+ AM+ K G     +V +AL+  + +      A  +F+ M+ ++ V+ N ++ G  
Sbjct: 226 ---QVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYA 282

Query: 272 ---------------RRKG------------------------KEVHGYLIRSGLFDMVA 292
                          R  G                        K++H  ++++G      
Sbjct: 283 AIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQD 342

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFM-IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           +   L+  Y+KC ++D++  +F       + V+W  MI G  QN   ++A+  FC M R+
Sbjct: 343 IRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSRE 402

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G+  ++F+  + L+   S     L  Q+H + +K   +   SV+ ALL  Y   G +   
Sbjct: 403 GVRPNHFTYSTVLAGKPS----SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVES 458

Query: 412 LKVFFLMPEHDQVSWNSVIGAFA---DSEALVSEAVKYYLDMRRAGWSPNGVTFINIL-A 467
            +VF+ +P  D V+W++++   A   DSE    +A++ ++ + + G  PN  TF +++ A
Sbjct: 459 ARVFYSIPAKDIVAWSAMLTGLAQTRDSE----KAMEVFIQLVKEGVKPNEYTFSSVINA 514

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
            +SS +  + G Q+HA  +K   +N   + +ALL+ Y K G ++  EK+F R  E RD V
Sbjct: 515 CSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTR-QEERDIV 573

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           SWNSMI+GY  +    KA+ +   M  +G  LD  TF  VL+AC     +E G +     
Sbjct: 574 SWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIM 633

Query: 588 VRAC-LEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           ++   ++      S +VD+YS+ G  D A    + MP
Sbjct: 634 IKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMP 670



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 144/562 (25%), Positives = 263/562 (46%), Gaps = 38/562 (6%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q LK GF  DV +  +L+++Y++  D      +FDEM  +N VSW  ++SGY   G++
Sbjct: 127 HCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLN 186

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           +E   +  +M   G   N +   +VL A  +   S  + G+QVH +++K+   F   V N
Sbjct: 187 DEVIHLINQMQMEGVNPNGFTFATVLGALAD--ESIIEGGVQVHAMIVKNGFEFTTFVCN 244

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI MY    E    A  +F+ +  RD ++WN +I  Y+  G  +  F++F RM+  G +
Sbjct: 245 ALICMYLKS-EMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVK 303

Query: 188 YS--------------------------LKPNEYTFGSLITAAYSSVLSGSYLLQQILAM 221
            S                          +  N Y F   I  A     S    + +   +
Sbjct: 304 LSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKL 363

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLMEGRRKG-- 275
              A    ++   +A++ GF +  N   A  +F QM    ++ N  + + ++ G+     
Sbjct: 364 FSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL 423

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
            ++H  +I++    + +V   L++ Y K G + +S  VF  +  KD V+W+ M++GL Q 
Sbjct: 424 SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQT 483

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC-ASLGWIMLGQQIHGEGLKLGLDSDVSV 394
              E+A+  F  + ++G+  + ++  S +++C +S   +  G+QIH   +K G  + + V
Sbjct: 484 RDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCV 543

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           S+ALL++Y+  G +    KVF    E D VSWNS+I  +        +A++ +  M+  G
Sbjct: 544 SSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYG-QHGDAKKALEVFQIMQNQG 602

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDC 513
              + VTFI +L A +   + + G +    +IK Y++  +    + ++  Y + G  D  
Sbjct: 603 LPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKA 662

Query: 514 EKIFARMSERRDEVSWNSMISG 535
             I   M        W ++++ 
Sbjct: 663 MDIINGMPFPASPTIWRTLLAA 684



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 169/355 (47%), Gaps = 32/355 (9%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVSGY 61
            K  H  ++K+G+ +   +   L+  Y +   +  A KLF  M D   N V+W  ++ G+
Sbjct: 325 TKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFS-MADAAHNVVTWTAMIGGF 383

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                + +A  +F +M R G   N +   +VL       PS      Q+H  ++K+    
Sbjct: 384 VQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAG----KPSSLL--SQLHAQIIKAYYEK 437

Query: 122 DGLVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              V+  L+  Y   G+ +ES     R+F  I  +D+++W+++++  +Q  D+    ++F
Sbjct: 438 VPSVATALLDAYVKTGNVVESA----RVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVF 493

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
            ++ +EG    +KPNEYTF S+I A  SS  +  +  +QI A   K+G  + L V SAL+
Sbjct: 494 IQLVKEG----VKPNEYTFSSVINACSSSAATVEHG-KQIHATAVKSGKSNALCVSSALL 548

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVA 292
           + +++ GN   A K+F +  ++++VS N ++ G       +K  EV   +   GL     
Sbjct: 549 TMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDV 608

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEAI 342
              G++      G +++    F  M     I K    ++ M+    + G +++A+
Sbjct: 609 TFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAM 663


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 309/808 (38%), Positives = 456/808 (56%), Gaps = 74/808 (9%)

Query: 133 YGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKP 192
           Y S   ST+       + +  D+++WN  IS + + G   S  ++F+ M R   R S+  
Sbjct: 24  YRSKRRSTNSYSPSSVKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPR---RSSVSY 80

Query: 193 NEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK 252
           N    G L  A +S       L + +   + +     DL+  + +++G+ R      A K
Sbjct: 81  NAMISGYLRNAKFS-------LARDLFDKMPE----RDLFSWNVMLTGYVRNRRLGEAHK 129

Query: 253 IFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
           +F+ M +K+VVS N ++ G                             YA+ G +D++R 
Sbjct: 130 LFDLMPKKDVVSWNAMLSG-----------------------------YAQNGFVDEARE 160

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           VF  M  ++S+SWN +++    NG  +EA       RR     SN+ LIS   +C   G+
Sbjct: 161 VFNKMPHRNSISWNGLLAAYVHNGRLKEA-------RRLFESQSNWELISW--NCLMGGY 211

Query: 373 IMLGQQIHGEGLKLGLDS----DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
           +   + + G+  +L  D     DV   N ++S YA  G LS+  ++F   P  D  +W +
Sbjct: 212 VK--RNMLGDARQL-FDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTA 268

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
           ++  +  +  +V EA KY+ +M       N +++  +LA    +    +  ++   +   
Sbjct: 269 MVSGYVQN-GMVDEARKYFDEMP----VKNEISYNAMLAGYVQYKKMVIAGELFEAMPCR 323

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNL 548
           N+++     N +++ YG+ G +    K+F  M +R D VSW ++ISGY  N    +A+N+
Sbjct: 324 NISSW----NTMITGYGQNGGIAQARKLFDMMPQR-DCVSWAAIISGYAQNGHYEEALNM 378

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
              M + G+  +  TF+  LS CA +A LE G +VH   V+A  E    +G+AL+ MY K
Sbjct: 379 FVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFK 438

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
           CG  D A+  F+ +  ++V SWN+MI+GYARHG G +AL LF  MK  G  PD +T VGV
Sbjct: 439 CGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGV 498

Query: 669 LSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITP 728
           LSACSH+GL+D G ++F SM + Y + P  + ++CM+DLLGRAG L++ E  +  MP  P
Sbjct: 499 LSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDP 558

Query: 729 NSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
            +  W  +LGA     N   TELG KAA M+F+MEPQN+  YVLL+N+YA+ G+W DV K
Sbjct: 559 GAASWGALLGASRIHGN---TELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGK 615

Query: 788 ARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQ 847
            R  M+EA V+K  G SWV +++ +H F  GD  HPEKD IY  L+EL+ KMR  GYV  
Sbjct: 616 MRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSS 675

Query: 848 TKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISK 906
           TK  L D+E E KE ++ YHSEK+AVAF +LT  +  PIR+MKNLRVC DCH+A K ISK
Sbjct: 676 TKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISK 735

Query: 907 IVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           IVGR I+LRDS+RFHHF++G CSCGDYW
Sbjct: 736 IVGRLIILRDSHRFHHFSEGICSCGDYW 763



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 152/545 (27%), Positives = 252/545 (46%), Gaps = 73/545 (13%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM- 77
           D+F  N ++  YVR   L  A KLFD MP ++ VSW  ++SGY   G  +EA ++F +M 
Sbjct: 107 DLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMP 166

Query: 78  ----VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY 133
               +    LL  Y     L+  +        F  Q +  ++  N    G V   ++   
Sbjct: 167 HRNSISWNGLLAAYVHNGRLKEARRL------FESQSNWELISWNCLMGGYVKRNMLG-- 218

Query: 134 GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPN 193
                    AR++F+ +  RD+ISWN++IS Y+Q GD     +LF+              
Sbjct: 219 --------DARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNE------------- 257

Query: 194 EYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKI 253
                                             + D++  +A+VSG+ + G    ARK 
Sbjct: 258 --------------------------------SPIRDVFTWTAMVSGYVQNGMVDEARKY 285

Query: 254 FEQMIQKNVVSMNGLMEGRRKGKE--VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
           F++M  KN +S N ++ G  + K+  + G L  +     ++  N ++  Y + G I  +R
Sbjct: 286 FDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQAR 345

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
            +F  M  +D VSW  +ISG  QNG YEEA+  F  M+RDG  S+  +    LS+CA + 
Sbjct: 346 KLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIA 405

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
            + LG+Q+HG+ +K G ++   V NALL +Y   G       VF  + E D VSWN++I 
Sbjct: 406 ALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIA 465

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNV 490
            +A       +A+  +  M++AG  P+ +T + +L+A S   +   G +    + + YNV
Sbjct: 466 GYA-RHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNV 524

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI-SGYIH--NELLPKAMN 547
              +     ++   G+ G +++ E +   M       SW +++ +  IH   EL  KA  
Sbjct: 525 KPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAE 584

Query: 548 LVWFM 552
           +V+ M
Sbjct: 585 MVFKM 589



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 155/362 (42%), Gaps = 51/362 (14%)

Query: 18  YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM 77
           +++   N L+  YV+   L  A +LFD MP R+ +SW  ++SGY   G  ++A ++F E 
Sbjct: 199 WELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNES 258

Query: 78  -VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
            +R  F       G V     +     F   M V   +   N    G V    + + G  
Sbjct: 259 PIRDVFTWTAMVSGYVQNGMVDEARKYFD-EMPVKNEI-SYNAMLAGYVQYKKMVIAGEL 316

Query: 137 LESTDC---------------------ARRIFEEIETRDLISWNSIISVYSQRGDTISVF 175
            E+  C                     AR++F+ +  RD +SW +IIS Y+Q G      
Sbjct: 317 FEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEAL 376

Query: 176 KLFSRMQREGFRYSLKPNEYTFG-SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVG 234
            +F  M+R+G       N  TF  +L T A  + L    L +Q+   V KAG  +  +VG
Sbjct: 377 NMFVEMKRDG----ESSNRSTFSCALSTCADIAALE---LGKQVHGQVVKAGFETGCFVG 429

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY----------LIR 284
           +AL+  + + G+   A  +FE + +K+VVS N ++ G  +    HG+          + +
Sbjct: 430 NALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYAR----HGFGRQALVLFESMKK 485

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYE 339
           +G+        G+++  +  G ID     F  M     +   S  +  MI  L + G  E
Sbjct: 486 AGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLE 545

Query: 340 EA 341
           EA
Sbjct: 546 EA 547



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H Q++K GF    F+ N L+ +Y + G    A+ +F+ + +++ VSW  +++GY  
Sbjct: 410 GKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYAR 469

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G   +A  +F+ M +AG   +   +  VL AC   G
Sbjct: 470 HGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSG 506


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 310/904 (34%), Positives = 489/904 (54%), Gaps = 72/904 (7%)

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE 148
           L  +LR C   G +    G Q+H  ++K     + L+ N L+ MY  C  S D A   F 
Sbjct: 27  LAGLLRRC--IGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKC-RSLDDANAAFS 83

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
            + +R + +WN++I+  S      +VF L++RM+ E  R   +PN  T  +++ A  S  
Sbjct: 84  ALRSRGIATWNTLIAAQSS---PAAVFDLYTRMKLEE-RAENRPNRLTIIAVLGAIASGD 139

Query: 209 LSGSYLLQQILAMV----KKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS 264
            S S   +    +V    + + L  DL+V +AL+  + + G    A ++F ++   +++ 
Sbjct: 140 PSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLIC 199

Query: 265 MN--------------------------GLMEGRRK----------------GKEVHGYL 282
            N                          GL+  R                   + +H  +
Sbjct: 200 WNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARV 259

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
              G    V V   LV MY +CG++D+S +VF  M  ++ VSWN MI+   Q G    A 
Sbjct: 260 EELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAF 319

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ--IHGEGLKLGLDSDVSVSNALLS 400
             +  M+++G   +  + ++ L +  S     LG+   +HG     GL+ DV V  AL++
Sbjct: 320 AIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVT 379

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +Y   G + R    F  +P  + VSWN+++ A+ D+     EA++ +  M+R   +PN V
Sbjct: 380 MYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDN-GRAREAMELFAAMKRQSLAPNKV 438

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNV-ANETTIENALLSCYGKCGEMDDCEKIFAR 519
           +++ +L      S  +    +HA+V+   + A E++I N ++  + + G +++    F  
Sbjct: 439 SYLAVLGCCEDVSEAR---SIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAF-D 494

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
            +  +D VSWN+ ++     E L  A+   + M   G R D FT  +V+  CA + TLE 
Sbjct: 495 ATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLEL 554

Query: 580 GMEVHACGVRAC-LEFDVVIGSALVDMYSKCGR-IDYASRFFDLMP--VRNVYSWNSMIS 635
           G  +      A  +E DVV+ SA+++M +KCG  +D   R F  MP   +++ +WN+MI+
Sbjct: 555 GRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIA 614

Query: 636 GYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
            YA+HGHG KAL LF  M+    + PD  TFV VLS CSHAGLV++G   F    +V G+
Sbjct: 615 AYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGI 674

Query: 695 IPQ-LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
             Q +E ++C+VD+LGR G L + E+FI KMP+  +S++W ++LGAC  ++    E G +
Sbjct: 675 EQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGAC--SSYGDLEGGER 732

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA-GCSWVTMKDGV 812
           AA    E+   ++V YV+L+N+YA+ G+WED  + R+ M E  VKK A G S + +K+ V
Sbjct: 733 AARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRV 792

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
           H F A D SHP+ D IY +L+ L   +R+AGYVP T+  L D+E E KE L+ YHSEK+A
Sbjct: 793 HEFFARDRSHPQSDEIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLA 852

Query: 873 VAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF-NDGKCSC 930
           +AF +++   +  IR++KNLRVC DCH+A KFI+++  REI +RD NRFHHF  DG+CSC
Sbjct: 853 IAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSC 912

Query: 931 GDYW 934
           GDYW
Sbjct: 913 GDYW 916



 Score =  233 bits (594), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 194/710 (27%), Positives = 317/710 (44%), Gaps = 74/710 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H QI+K G A +  L N L+ +Y +   L  A+  F  +  R   +W  +++  +  
Sbjct: 44  RQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSSP 103

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQ----VHCLVLKSNQT 120
               +     K   RA    NR  + +VL A     PS           VH  +  S+  
Sbjct: 104 AAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSSSSSSRAQARIVHDDIRGSDLE 163

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS---QRGDTISVFKL 177
            D  V+  L+  YG C    + A  +F  I+  DLI WN+ I   +   +R D      L
Sbjct: 164 RDLFVATALLDAYGKC-GCVESALEVFSRIQVPDLICWNAAIMACAGNDERPD--RALLL 220

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
             RM  EG    L PN  +F +++++      S   L + I A V++ G L D+ V +AL
Sbjct: 221 VRRMWLEG----LLPNRASFVAILSSCGDH--SSLPLARSIHARVEELGFLGDVVVATAL 274

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLM---------------------EGRRKGK 276
           V+ + R G+   +  +FE M  +N VS N ++                     EG R  K
Sbjct: 275 VTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNK 334

Query: 277 ----------------------EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                                  +HG++  +GL   V VG  LV MY   G ID +R+ F
Sbjct: 335 ITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAF 394

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             +  K+ VSWN M++    NG   EA+  F AM+R  L  +  S ++ L  C     + 
Sbjct: 395 DAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VS 451

Query: 375 LGQQIHGEGLKLGL-DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
             + IH E +  GL   + S++N ++ ++A +G L   +  F      D VSWN+ + A 
Sbjct: 452 EARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAAL 511

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-IKYNVAN 492
           +  E L      +Y  M+  G+ P+  T ++++   +     +LG  +  Q+     V  
Sbjct: 512 SAREDLHGAITAFYT-MQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVER 570

Query: 493 ETTIENALLSCYGKCG-EMDDCEKIFARMS-ERRDEVSWNSMISGYIHNELLPKAMNLVW 550
           +  +E+A+++   KCG  +D+CE++FARM  +R+D V+WN+MI+ Y  +    KA+ L  
Sbjct: 571 DVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFR 630

Query: 551 FMMQRGQ-RLDHFTFATVLSACASVATLERGMEVH--ACGVRACLEFDVVIGSALVDMYS 607
            M QR   R D  TF +VLS C+    +E G+     A  V    +  V   + LVD+  
Sbjct: 631 IMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLG 690

Query: 608 KCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGH---GDKALTLFSQM 653
           + G +  A  F   MP+  +   W S++   + +G    G++A   F ++
Sbjct: 691 RMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIEL 740



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 153/579 (26%), Positives = 278/579 (48%), Gaps = 59/579 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSW-ACIVSGYT 62
           A++ H  I       D+F+   L++ Y + G + SA ++F  +   + + W A I++   
Sbjct: 150 ARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAG 209

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
           +    + A  + + M   G L NR +  ++L +C +   S       +H  V +     D
Sbjct: 210 NDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGD--HSSLPLARSIHARVEELGFLGD 267

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            +V+  L+ MYG C  S D +  +FE +  R+ +SWN++I+ ++Q G   + F ++ RMQ
Sbjct: 268 VVVATALVTMYGRC-GSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQ 326

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           +EGFR    PN+ TF + + AA SS          +   +  AGL  D+ VG+ALV+ + 
Sbjct: 327 QEGFR----PNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYG 382

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLM-----EGRRK----------------------- 274
             G    AR  F+ +  KN+VS N ++      GR +                       
Sbjct: 383 STGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLA 442

Query: 275 ----------GKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      + +H  ++ +GLF    ++ NG+V M+A+ G+++++ + F   + KDSV
Sbjct: 443 VLGCCEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSV 502

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE- 382
           SWNT ++ L        AI  F  M+ +G     F+L+S +  CA LG + LG+ I  + 
Sbjct: 503 SWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQL 562

Query: 383 GLKLGLDSDVSVSNALLSLYADAG-YLSRCLKVFFLMPE--HDQVSWNSVIGAFADSEAL 439
              + ++ DV V +A++++ A  G  +  C ++F  MP+   D V+WN++I A+A     
Sbjct: 563 SAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYA-QHGH 621

Query: 440 VSEAVKYYLDM-RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV--ANETTI 496
             +A+K +  M +R+   P+  TF+++L+  S   + + G  +H   +   V    +  +
Sbjct: 622 GRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDG--IHCFFLAREVLGIEQQPV 679

Query: 497 EN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           E+   L+   G+ G + + E    +M    D V W S++
Sbjct: 680 EHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLL 718



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 135/523 (25%), Positives = 231/523 (44%), Gaps = 73/523 (13%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H ++ + GF  DV +   L+ +Y R G +  +  +F+ M  RN VSW  +++ +  
Sbjct: 252 ARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQ 311

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFG--MQVHCLVLKSNQTF 121
            G  + A  ++  M + GF  N+    + L+A   C  S    G    +H  +  +    
Sbjct: 312 CGHRSAAFAIYWRMQQEGFRPNKITFVTALKAA--CSSSSQDLGESAALHGWIACAGLEG 369

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D +V   L+ MYGS   + D AR  F+ I  ++++SWN++++ Y   G      +LF+ M
Sbjct: 370 DVMVGTALVTMYGST-GAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAM 428

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLS-DLYVGSALVSG 240
           +R+    SL PN+ ++ +++        + S     I A V   GL + +  + + +V  
Sbjct: 429 KRQ----SLAPNKVSYLAVLGCCEDVSEARS-----IHAEVVGNGLFAQESSIANGVVRM 479

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLI----------RSGLFDM 290
           FAR G+   A   F+  + K+ VS N  +      +++HG +           R   F +
Sbjct: 480 FARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTL 539

Query: 291 VA--------------------------------VGNGLVNMYAKCG-TIDDSRSVFRFM 317
           V+                                V + ++NM AKCG ++D+   +F  M
Sbjct: 540 VSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARM 599

Query: 318 IG--KDSVSWNTMISGLDQNGCYEEAIMNFCAM-RRDGLMSSNFSLISTLSSCASLGWIM 374
               KD V+WNTMI+   Q+G   +A+  F  M +R  +   + + +S LS C+  G + 
Sbjct: 600 PDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVE 659

Query: 375 LGQQIHGEGLK---LGLDSD-VSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSV 429
            G  IH   L    LG++   V     L+ +    GYL         MP   D V W S+
Sbjct: 660 DG--IHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSL 717

Query: 430 IGA---FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
           +GA   + D E     A + ++++ R+  S   V   NI AAA
Sbjct: 718 LGACSSYGDLEG-GERAARAFIELYRSD-SVGYVVLSNIYAAA 758



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 12/186 (6%)

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           T A +L  C   A L +G ++H   V+  L  + ++G+ LV MYSKC  +D A+  F  +
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL---PDHVTFVGVLSACSHAGLVD 679
             R + +WN++I+  +          L+++MKL+      P+ +T + VL A +      
Sbjct: 86  RSRGIATWNTLIAAQSSPA---AVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSS 142

Query: 680 EGFKHFKSM---SQVYGLIPQLEQF--SCMVDLLGRAGELDKIEEFINKMPITPNSLIWR 734
                 ++      + G   + + F  + ++D  G+ G ++   E  +++ + P+ + W 
Sbjct: 143 SSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQV-PDLICWN 201

Query: 735 TVLGAC 740
             + AC
Sbjct: 202 AAIMAC 207


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  514 bits (1323), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 272/652 (41%), Positives = 397/652 (60%), Gaps = 25/652 (3%)

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           +AVG+ L++M A+ G +  +R VF  +I K  V W  +IS   Q  C EEA+  F     
Sbjct: 188 IAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLE 247

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY--- 407
           DG     +++ S +S+C  LG + LG Q+H   L++G  SD  VS  L+ +YA +     
Sbjct: 248 DGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQA 307

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +    KVF  M ++D +SW ++I  +  S    ++ +  + +M      PN +T+ +IL 
Sbjct: 308 MDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILK 367

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
           A ++ S    G QVHA VIK N A   T+ NAL+S Y + G M++  ++F ++ ER    
Sbjct: 368 ACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYER---- 423

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD----HFTFATVLSACASVATLERGMEV 583
              SMIS        P        +  R  R+D      TFA+++SA ASV  L +G ++
Sbjct: 424 ---SMISCITEGRDAP--------LDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQL 472

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           HA  ++A    D  + ++LV MYS+CG ++ A R F+ +  RNV SW SMISG A+HG+ 
Sbjct: 473 HAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYA 532

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC 703
           ++AL+LF  M L G  P+ VT++ VLSACSH GLV EG ++F+SM + +GLIP++E ++C
Sbjct: 533 ERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYAC 592

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP 763
           MVDLL R+G + +  EFIN+MP+  ++L+W+T+LGAC   +    E+G  AA  + E+EP
Sbjct: 593 MVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHD--NIEVGEIAAKNVIELEP 650

Query: 764 QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHP 823
           ++   YVLL+N+YA  G W++VA+ R AM++  + KE G SW+ +++  H F AGD SHP
Sbjct: 651 RDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHP 710

Query: 824 EKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSK 882
               IY KL  L  +++  GYVP T   L D+  E KE  +  HSEKIAVAF ++T ++ 
Sbjct: 711 RAQDIYGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAP 770

Query: 883 LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            PIRI KNLRVC DCHSA K++SK   REI+LRDSNRFH   DG+CSCG+YW
Sbjct: 771 KPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 228/452 (50%), Gaps = 48/452 (10%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+ + + LI++  R GDLASA K+FD + ++  V W  ++S Y     + EA ++F + +
Sbjct: 187 DIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFL 246

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG--SC 136
             GF  +RY + S++ AC E G    + G+Q+H L L+     D  VS  L+ MY   + 
Sbjct: 247 EDGFEPDRYTMSSMISACTELG--SVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNI 304

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRG-DTISVFKLFSRMQREGFRYSLKPNEY 195
            ++ D A ++FE +   D+ISW ++IS Y Q G     V  LF  M  E    S+KPN  
Sbjct: 305 EQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNE----SIKPNHI 360

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
           T+ S++ A  +  +S     +Q+ A V K+   +   VG+ALVS +A  G    AR++F 
Sbjct: 361 TYSSILKACAN--ISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFN 418

Query: 256 QMIQKNVVSMNGLMEGR---------------------------------RKGKEVHGYL 282
           Q+ +++++S   + EGR                                  KG+++H   
Sbjct: 419 QLYERSMISC--ITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMT 476

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
           +++G      V N LV+MY++CG ++D+   F  +  ++ +SW +MISGL ++G  E A+
Sbjct: 477 LKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERAL 536

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IHGEGLKLGLDSDVSVSNALLSL 401
             F  M   G+  ++ + I+ LS+C+ +G +  G++         GL   +     ++ L
Sbjct: 537 SLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDL 596

Query: 402 YADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            A +G +   L+    MP + D + W +++GA
Sbjct: 597 LARSGLVKEALEFINEMPLKADALVWKTLLGA 628



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 162/631 (25%), Positives = 285/631 (45%), Gaps = 77/631 (12%)

Query: 104 FKFGMQVHCLVLKSNQ-TFDGLVSNVLIAMYGSCLESTDCARRIFEEIE-TRDLISWNSI 161
            + G  +H  +L+ +    D +V+N L+ +Y  C  +   AR +F+ +   RD++SW ++
Sbjct: 64  LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRC-GAVASARNVFDGMRGLRDIVSWTAM 122

Query: 162 ISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAM 221
            S  ++ G       L   M   G    L PN YT  ++  A +   L        +  +
Sbjct: 123 ASCLARNGAERESLLLIGEMLESG----LLPNAYTLCAVAHACFPHELYCLVGGVVLGLV 178

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV------------------ 263
            K     +D+ VGSAL+   AR G+   ARK+F+ +I+K VV                  
Sbjct: 179 HKMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEA 238

Query: 264 -----------------SMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
                            +M+ ++         R G ++H   +R G      V  GLV+M
Sbjct: 239 VEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDM 298

Query: 301 YAKCG---TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN-FCAMRRDGLMSS 356
           YAK      +D +  VF  M   D +SW  +ISG  Q+G  E  +M  F  M  + +  +
Sbjct: 299 YAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPN 358

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
           + +  S L +CA++     G+Q+H   +K    +  +V NAL+S+YA++G +    +VF 
Sbjct: 359 HITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFN 418

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR--RAGWSPNGVTFINILAAASSFSM 474
            + E   +S              ++E     LD R  R     +  TF ++++AA+S  M
Sbjct: 419 QLYERSMIS-------------CITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGM 465

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
              G Q+HA  +K    ++  + N+L+S Y +CG ++D  + F  + + R+ +SW SMIS
Sbjct: 466 LTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKD-RNVISWTSMIS 524

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR-ACLE 593
           G   +    +A++L   M+  G + +  T+  VLSAC+ V  +  G E      R   L 
Sbjct: 525 GLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLI 584

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGH---GDKALTL 649
             +   + +VD+ ++ G +  A  F + MP++ +   W +++     H +   G+ A   
Sbjct: 585 PRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKN 644

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
             +++   P P    +V + +  + AGL DE
Sbjct: 645 VIELEPRDPAP----YVLLSNLYADAGLWDE 671



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 234/518 (45%), Gaps = 84/518 (16%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPD-RNSVSWACIVSGYTHKGMSNEACKMFKEM 77
           D  + N+L+ +Y R G +ASA  +FD M   R+ VSW  + S     G   E+  +  EM
Sbjct: 83  DAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEM 142

Query: 78  VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF---------DGLVSNV 128
           + +G L N Y L +V  AC         F  +++CLV                D  V + 
Sbjct: 143 LESGLLPNAYTLCAVAHAC---------FPHELYCLVGGVVLGLVHKMGLWGTDIAVGSA 193

Query: 129 LIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRY 188
           LI M     +    AR++F+ +  + ++ W  +IS Y Q        ++F     +GF  
Sbjct: 194 LIDMLARNGDLAS-ARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGF-- 250

Query: 189 SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG--- 245
             +P+ YT  S+I+A   + L    L  Q+ ++  + G  SD  V   LV  +A+     
Sbjct: 251 --EPDRYTMSSMISAC--TELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQ 306

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEG---------------------------------- 271
              YA K+FE+M + +V+S   L+ G                                  
Sbjct: 307 AMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSIL 366

Query: 272 --------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      G++VH ++I+S       VGN LV+MYA+ G ++++R VF  +  +   
Sbjct: 367 KACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYER--- 423

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRD-GLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
              +MIS + +     +A ++    R D G+ SS F+  S +S+ AS+G +  GQQ+H  
Sbjct: 424 ---SMISCITEG---RDAPLDHRIGRMDMGISSSTFA--SLISAAASVGMLTKGQQLHAM 475

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            LK G  SD  VSN+L+S+Y+  GYL    + F  + + + +SW S+I   A        
Sbjct: 476 TLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLA-KHGYAER 534

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
           A+  + DM   G  PN VT+I +L+A S   + + G +
Sbjct: 535 ALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKE 572



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 159/326 (48%), Gaps = 24/326 (7%)

Query: 371 GWIMLGQQIHGEGLKLGL-DSDVSVSNALLSLYADAGYLSRCLKVFFLMPE-HDQVSWNS 428
           G + LG+ +H   L+  L D D  V+N+LL+LY+  G ++    VF  M    D VSW +
Sbjct: 62  GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
           +    A + A   E++    +M  +G  PN  T   +  A          H+++  V   
Sbjct: 122 MASCLARNGA-ERESLLLIGEMLESGLLPNAYTLCAVAHAC-------FPHELYCLVGGV 173

Query: 489 NV---------ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
            +           +  + +AL+    + G++    K+F  + E +  V W  +IS Y+  
Sbjct: 174 VLGLVHKMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIE-KTVVVWTLLISRYVQG 232

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
           E   +A+ +    ++ G   D +T ++++SAC  + ++  G+++H+  +R     D  + 
Sbjct: 233 ECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVS 292

Query: 600 SALVDMYSKCG---RIDYASRFFDLMPVRNVYSWNSMISGYARHG-HGDKALTLFSQMKL 655
             LVDMY+K      +DYA++ F+ M   +V SW ++ISGY + G   +K + LF +M  
Sbjct: 293 CGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLN 352

Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEG 681
           +   P+H+T+  +L AC++    D G
Sbjct: 353 ESIKPNHITYSSILKACANISDHDSG 378



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 141/303 (46%), Gaps = 14/303 (4%)

Query: 476 KLGHQVHAQVIKYNVAN-ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           +LG  +H ++++ ++ + +  + N+LL+ Y +CG +     +F  M   RD VSW +M S
Sbjct: 65  RLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMAS 124

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS-----VATLERGMEVHACGVR 589
               N    +++ L+  M++ G   + +T   V  AC       +        VH  G+ 
Sbjct: 125 CLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLW 184

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
                D+ +GSAL+DM ++ G +  A + FD +  + V  W  +IS Y +    ++A+ +
Sbjct: 185 GT---DIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEI 241

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           F     DG  PD  T   ++SAC+  G V  G +   S++   G          +VD+  
Sbjct: 242 FLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQ-LHSLALRMGFASDACVSCGLVDMYA 300

Query: 710 RAGELDKIEEFINKM--PITPNSLI-WRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           ++  +++  ++ NK+   +  N +I W  ++    ++  ++ ++      ML E    N 
Sbjct: 301 KSN-IEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNH 359

Query: 767 VNY 769
           + Y
Sbjct: 360 ITY 362



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 50/94 (53%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   LK GF  D F+ N+L+++Y R G L  A + F+E+ DRN +SW  ++SG    G 
Sbjct: 472 LHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGY 531

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           +  A  +F +M+  G   N     +VL AC   G
Sbjct: 532 AERALSLFHDMILTGVKPNDVTYIAVLSACSHVG 565


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 278/766 (36%), Positives = 430/766 (56%), Gaps = 55/766 (7%)

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR-- 272
           L QIL ++ K G  ++    + L+S F +  +   A ++FE +  K  V  + +++G   
Sbjct: 60  LHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAK 119

Query: 273 ---------------------------------------RKGKEVHGYLIRSG----LFD 289
                                                  R+G+E+HG +I +G    LF 
Sbjct: 120 NSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFA 179

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
           M AV    VN+YAKC  I+D+  +F  M  +D VSWNT+++G  QNG    A+     M+
Sbjct: 180 MTAV----VNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQ 235

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
             G    + +L+S L + A L  + +G+ IHG   + G +  V+V+ A+L  Y   G + 
Sbjct: 236 EAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVR 295

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
               VF  M   + VSWN++I  +A +     EA   +L M   G  P  V+ +  L A 
Sbjct: 296 SARLVFKGMSSRNVVSWNTMIDGYAQN-GESEEAFATFLKMLDEGVEPTNVSMMGALHAC 354

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
           ++    + G  VH  + +  +  + ++ N+L+S Y KC  +D    +F  + + +  V+W
Sbjct: 355 ANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNL-KHKTVVTW 413

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
           N+MI GY  N  + +A+NL   M     + D FT  +V++A A ++   +   +H   +R
Sbjct: 414 NAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIR 473

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
             ++ +V + +AL+D ++KCG I  A + FDLM  R+V +WN+MI GY  +GHG +AL L
Sbjct: 474 TLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDL 533

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           F++M+     P+ +TF+ V++ACSH+GLV+EG  +F+SM + YGL P ++ +  MVDLLG
Sbjct: 534 FNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLG 593

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
           RAG LD   +FI  MP+ P   +   +LGA CR + +  ELG K A+ LF+++P +   +
Sbjct: 594 RAGRLDDAWKFIQDMPVKPGITVLGAMLGA-CRIH-KNVELGEKTADELFDLDPDDGGYH 651

Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIY 829
           VLLANMYAS   W+ VA+ R AM++  ++K  GCS V +++ VH F +G  +HP+   IY
Sbjct: 652 VLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIY 711

Query: 830 EKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIM 888
             L+ L  +M+ AGYVP T  ++ D+E + KE L+S HSE++A+AF +L       I I 
Sbjct: 712 AYLETLGDEMKAAGYVPDTN-SIHDVEEDVKEQLLSSHSERLAIAFGLLNTRHGTAIHIR 770

Query: 889 KNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           KNLRVCGDCH A K+IS + GREI++RD  RFHHF +G CSCGDYW
Sbjct: 771 KNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGICSCGDYW 816



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 154/565 (27%), Positives = 273/565 (48%), Gaps = 63/565 (11%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR 168
           Q+  L++K+    + L    LI+++      T+ AR +FE +E +  + +++++  Y++ 
Sbjct: 62  QILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAAR-VFEPVEHKLDVLYHTMLKGYAKN 120

Query: 169 GDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL----QQILAMVKK 224
                  + + RM+ +     + P  Y F  L+       LSG  L     ++I  MV  
Sbjct: 121 STLRDAVRFYERMRCD----EVMPVVYDFTYLLQ------LSGENLDLRRGREIHGMVIT 170

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------ 272
            G  S+L+  +A+V+ +A+      A K+FE+M Q+++VS N ++ G             
Sbjct: 171 NGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQV 230

Query: 273 -----------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
                                        R G+ +HGY  R+G   MV V   +++ Y K
Sbjct: 231 VLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFK 290

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           CG++  +R VF+ M  ++ VSWNTMI G  QNG  EEA   F  M  +G+  +N S++  
Sbjct: 291 CGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGA 350

Query: 364 LSSCASLGWIMLGQQIHG--EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           L +CA+LG +  G+ +H   +  K+G   DVSV N+L+S+Y+    +     VF  +   
Sbjct: 351 LHACANLGDLERGRYVHRLLDEKKIGF--DVSVMNSLISMYSKCKRVDIAASVFGNLKHK 408

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
             V+WN++I  +A +   V+EA+  + +M+     P+  T ++++ A +  S+ +    +
Sbjct: 409 TVVTWNAMILGYAQN-GCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWI 467

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H   I+  +     +  AL+  + KCG +    K+F  M ER   ++WN+MI GY  N  
Sbjct: 468 HGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERH-VITWNAMIDGYGTNGH 526

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM-EVHACGVRACLEFDVVIGS 600
             +A++L   M     + +  TF +V++AC+    +E GM    +      LE  +    
Sbjct: 527 GREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYG 586

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVR 625
           A+VD+  + GR+D A +F   MPV+
Sbjct: 587 AMVDLLGRAGRLDDAWKFIQDMPVK 611



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 136/553 (24%), Positives = 259/553 (46%), Gaps = 54/553 (9%)

Query: 11  ILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEA 70
           I+K+GF  +      LI+++ +   +  A+++F+ +  +  V +  ++ GY       +A
Sbjct: 67  IIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDA 126

Query: 71  CKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLI 130
            + ++ M     +   Y    +L+   E      + G ++H +V+ +    +      ++
Sbjct: 127 VRFYERMRCDEVMPVVYDFTYLLQLSGE--NLDLRRGREIHGMVITNGFQSNLFAMTAVV 184

Query: 131 AMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSL 190
            +Y  C +  D A ++FE +  RDL+SWN++++ Y+Q G      ++  +MQ  G     
Sbjct: 185 NLYAKCRQIED-AYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAG----Q 239

Query: 191 KPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
           KP+  T  S++ A   + L    + + I     +AG    + V +A++  + + G+   A
Sbjct: 240 KPDSITLVSVLPAV--ADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSA 297

Query: 251 RKIFEQMIQKNVVSMNGLMEGR-------------------------------------- 272
           R +F+ M  +NVVS N +++G                                       
Sbjct: 298 RLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANL 357

Query: 273 ---RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
               +G+ VH  L    +   V+V N L++MY+KC  +D + SVF  +  K  V+WN MI
Sbjct: 358 GDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMI 417

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
            G  QNGC  EA+  FC M+   +   +F+L+S +++ A L      + IHG  ++  +D
Sbjct: 418 LGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMD 477

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
            +V V  AL+  +A  G +    K+F LM E   ++WN++I  +  +     EA+  + +
Sbjct: 478 KNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYG-TNGHGREALDLFNE 536

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKC 507
           M+     PN +TF++++AA S   + + G   + + +K N   E T+++  A++   G+ 
Sbjct: 537 MQNGSVKPNEITFLSVIAACSHSGLVEEG-MYYFESMKENYGLEPTMDHYGAMVDLLGRA 595

Query: 508 GEMDDCEKIFARM 520
           G +DD  K    M
Sbjct: 596 GRLDDAWKFIQDM 608



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 204/461 (44%), Gaps = 53/461 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H  ++ +GF  ++F    ++N+Y +   +  A K+F+ MP R+ VSW  +V+GY
Sbjct: 159 RRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGY 218

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G +  A ++  +M  AG   +   L SVL A  +      + G  +H    ++   +
Sbjct: 219 AQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADL--KALRIGRSIHGYAFRAGFEY 276

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V+  ++  Y  C  S   AR +F+ + +R+++SWN++I  Y+Q G++   F  F +M
Sbjct: 277 MVNVATAMLDTYFKC-GSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKM 335

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             EG   +   N    G+L   A    L     + ++L   KK G   D+ V ++L+S +
Sbjct: 336 LDEGVEPT---NVSMMGALHACANLGDLERGRYVHRLLDE-KKIGF--DVSVMNSLISMY 389

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG------------------------------ 271
           ++      A  +F  +  K VV+ N ++ G                              
Sbjct: 390 SKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLV 449

Query: 272 -----------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                       R+ K +HG  IR+ +   V V   L++ +AKCG I  +R +F  M  +
Sbjct: 450 SVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQER 509

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
             ++WN MI G   NG   EA+  F  M+   +  +  + +S +++C+  G +  G   +
Sbjct: 510 HVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEG-MYY 568

Query: 381 GEGLK--LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
            E +K   GL+  +    A++ L   AG L    K    MP
Sbjct: 569 FESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMP 609



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 139/312 (44%), Gaps = 18/312 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H  + +    +DV + N+LI++Y +   +  A+ +F  +  +  V+W  ++ GY   
Sbjct: 364 RYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQN 423

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G  NEA  +F EM       + + L SV+ A  +   +  +    +H L +++    +  
Sbjct: 424 GCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVT--RQAKWIHGLAIRTLMDKNVF 481

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V   LI  +  C  +   AR++F+ ++ R +I+WN++I  Y   G       LF+ MQ  
Sbjct: 482 VCTALIDTHAKC-GAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNG 540

Query: 185 GFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
               S+KPNE TF S+I A   S  V  G Y  +   +M +  GL   +    A+V    
Sbjct: 541 ----SVKPNEITFLSVIAACSHSGLVEEGMYYFE---SMKENYGLEPTMDHYGAMVDLLG 593

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGR-RKGKEVH-GYLIRSGLFDMVAVGNG---- 296
           R G    A K  + M  K  +++ G M G  R  K V  G      LFD+     G    
Sbjct: 594 RAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVL 653

Query: 297 LVNMYAKCGTID 308
           L NMYA     D
Sbjct: 654 LANMYASASMWD 665



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 50/100 (50%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           ++ AK  H   ++     +VF+C  LI+ + + G + +A KLFD M +R+ ++W  ++ G
Sbjct: 461 TRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDG 520

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           Y   G   EA  +F EM       N     SV+ AC   G
Sbjct: 521 YGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSG 560


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 307/908 (33%), Positives = 488/908 (53%), Gaps = 76/908 (8%)

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE 148
           L  +LR C   G +    G Q+H  ++K     + L+ N L+ MY  C  S D A   F 
Sbjct: 27  LAGLLRRC--IGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKC-RSLDDANAAFS 83

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS- 207
            + +R + +WN++I+  S      +VF L++RM+ E  R   +PN+ T  +++ A  S  
Sbjct: 84  ALRSRGIATWNTLIAAQSS---PAAVFDLYTRMKLEE-RAENRPNKLTIIAVLGAIASGD 139

Query: 208 -----VLSGSYLLQQILAM--VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
                      + Q  +    ++ + L  DL+V +AL+  + + G    A ++F ++   
Sbjct: 140 PSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVP 199

Query: 261 NVVSMN--------------------------GLMEGRRK----------------GKEV 278
           +++  N                          GL+  R                   + +
Sbjct: 200 DLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSI 259

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H  +   G    V V   LV MY +CG++D+S +VF  M  ++ VSWN MI+   Q G  
Sbjct: 260 HARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHR 319

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ--IHGEGLKLGLDSDVSVSN 396
             A   +  M+++G   +  + ++ L +  S     LG+   +HG     GL+ DV V  
Sbjct: 320 SAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGT 379

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           AL+++Y   G + R    F  +P  + VSWN+++ A+ D+     EA++ +  M+R   +
Sbjct: 380 ALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDN-GRAREAMELFAAMKRQSLA 438

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV-ANETTIENALLSCYGKCGEMDDCEK 515
           PN V+++ +L      S  +    +HA+V+   + A E++I N ++  + + G +++   
Sbjct: 439 PNKVSYLAVLGCCEDVSEAR---SIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVA 495

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
            F   +  +D VSWN+ ++     E L  A+   + M   G R D FT  +V+  CA + 
Sbjct: 496 AF-DATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLG 554

Query: 576 TLERGMEVHACGVRAC-LEFDVVIGSALVDMYSKCGR-IDYASRFFDLMP--VRNVYSWN 631
           TLE G  +      A  +E DVV+ SA+++M +KCG  +D   R F  MP   +++ +WN
Sbjct: 555 TLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWN 614

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           +MI+ YA+HGHG KAL LF  M+    + PD  TFV VLS CSHAGLV++G   F    +
Sbjct: 615 TMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLARE 674

Query: 691 VYGLIPQ-LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
           V G+  Q +E ++C+VD+LGR G L + E+FI KMP+  +S++W ++LGAC  ++    E
Sbjct: 675 VLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGAC--SSYGDLE 732

Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKE-AGCSWVTM 808
            G +AA    E+   ++V YV+L+N+YA+ G+WED  + R+ M E  VKK   G S + +
Sbjct: 733 GGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIVV 792

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
           K+ VH F A D SHP+ D IY +L+ L   +R+AGYVP T+  L D+E E KE L+ YHS
Sbjct: 793 KNRVHEFFARDRSHPQSDAIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHS 852

Query: 869 EKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF-NDG 926
           EK+A+AF +++   +  IR++KNLRVC DCH+A KFI+++  REI +RD NRFHHF  DG
Sbjct: 853 EKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDG 912

Query: 927 KCSCGDYW 934
           +CSCGDYW
Sbjct: 913 ECSCGDYW 920



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 191/714 (26%), Positives = 315/714 (44%), Gaps = 78/714 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H QI+K G A +  L N L+ +Y +   L  A+  F  +  R   +W  +++  +  
Sbjct: 44  RQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSSP 103

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGP--------SGFKFGMQVHCLVLK 116
               +     K   RA    N+  + +VL A     P                VH  +  
Sbjct: 104 AAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSSSSSSRAPSIAQARIVHDDIRG 163

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS---QRGDTIS 173
           S+   D  V+  L+  YG C    + A  +F  I+  DLI WN+ I   +   +R D   
Sbjct: 164 SDLERDLFVATALLDAYGKC-GCVESALEVFSRIQVPDLICWNAAIMACAGNDERPD--R 220

Query: 174 VFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYV 233
              L  RM  EG    L PN  +F +++++      S   L + I A V++ G L D+ V
Sbjct: 221 ALLLVRRMWLEG----LLPNRASFVAILSSCGDH--SSLPLARSIHARVEELGFLGDVVV 274

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM---------------------EGR 272
            +ALV+ + R G+   +  +FE M  +N VS N ++                     EG 
Sbjct: 275 ATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGF 334

Query: 273 RKGK----------------------EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDS 310
           R  K                       +HG++  +GL   V VG  LV MY   G ID +
Sbjct: 335 RPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRA 394

Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
           R+ F  +  K+ VSWN M++    NG   EA+  F AM+R  L  +  S ++ L  C   
Sbjct: 395 RAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED- 453

Query: 371 GWIMLGQQIHGEGLKLGL-DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
             +   + IH E +  GL   + S++N ++ ++A +G L   +  F      D VSWN+ 
Sbjct: 454 --VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTK 511

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-IKY 488
           + A +  E L      +Y  M+  G+ P+  T ++++   +     +LG  +  Q+    
Sbjct: 512 VAALSAREDLHGAITAFYT-MQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAI 570

Query: 489 NVANETTIENALLSCYGKCG-EMDDCEKIFARMS-ERRDEVSWNSMISGYIHNELLPKAM 546
            V  +  + +A+++   KCG  +D+CE++FARM  +R+D V+WN+MI+ Y  +    KA+
Sbjct: 571 EVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKAL 630

Query: 547 NLVWFMMQRGQ-RLDHFTFATVLSACASVATLERGMEVH--ACGVRACLEFDVVIGSALV 603
            L   M QR   R D  TF +VLS C+    +E G+     A  V    +  V   + LV
Sbjct: 631 KLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLV 690

Query: 604 DMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGH---GDKALTLFSQM 653
           D+  + G +  A  F   MP+  +   W S++   + +G    G++A   F ++
Sbjct: 691 DVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIEL 744



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 153/579 (26%), Positives = 279/579 (48%), Gaps = 59/579 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSW-ACIVSGYT 62
           A++ H  I       D+F+   L++ Y + G + SA ++F  +   + + W A I++   
Sbjct: 154 ARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAG 213

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
           +    + A  + + M   G L NR +  ++L +C +   S       +H  V +     D
Sbjct: 214 NDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGD--HSSLPLARSIHARVEELGFLGD 271

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            +V+  L+ MYG C  S D +  +FE +  R+ +SWN++I+ ++Q G   + F ++ RMQ
Sbjct: 272 VVVATALVTMYGRC-GSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQ 330

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           +EGFR    PN+ TF + + AA SS          +   +  AGL  D+ VG+ALV+ + 
Sbjct: 331 QEGFR----PNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYG 386

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLM-----EGRRK----------------------- 274
             G    AR  F+ +  KN+VS N ++      GR +                       
Sbjct: 387 STGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLA 446

Query: 275 ----------GKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      + +H  ++ +GLF    ++ NG+V M+A+ G+++++ + F   + KDSV
Sbjct: 447 VLGCCEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSV 506

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE- 382
           SWNT ++ L        AI  F  M+ +G     F+L+S +  CA LG + LG+ I  + 
Sbjct: 507 SWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQL 566

Query: 383 GLKLGLDSDVSVSNALLSLYADAG-YLSRCLKVFFLMPE--HDQVSWNSVIGAFADSEAL 439
              + ++ DV V++A++++ A  G  +  C ++F  MP+   D V+WN++I A+A     
Sbjct: 567 SAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYA-QHGH 625

Query: 440 VSEAVKYYLDM-RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV--ANETTI 496
             +A+K +  M +R+   P+  TF+++L+  S   + + G  +H   +   V    +  +
Sbjct: 626 GRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDG--IHCFFLAREVLGIEQQPV 683

Query: 497 EN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           E+   L+   G+ G + + E    +M    D V W S++
Sbjct: 684 EHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLL 722



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 135/523 (25%), Positives = 231/523 (44%), Gaps = 73/523 (13%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H ++ + GF  DV +   L+ +Y R G +  +  +F+ M  RN VSW  +++ +  
Sbjct: 256 ARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQ 315

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFG--MQVHCLVLKSNQTF 121
            G  + A  ++  M + GF  N+    + L+A   C  S    G    +H  +  +    
Sbjct: 316 CGHRSAAFAIYWRMQQEGFRPNKITFVTALKAA--CSSSSQDLGESAALHGWIACAGLEG 373

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D +V   L+ MYGS   + D AR  F+ I  ++++SWN++++ Y   G      +LF+ M
Sbjct: 374 DVMVGTALVTMYGST-GAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAM 432

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLS-DLYVGSALVSG 240
           +R+    SL PN+ ++ +++        + S     I A V   GL + +  + + +V  
Sbjct: 433 KRQ----SLAPNKVSYLAVLGCCEDVSEARS-----IHAEVVGNGLFAQESSIANGVVRM 483

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLI----------RSGLFDM 290
           FAR G+   A   F+  + K+ VS N  +      +++HG +           R   F +
Sbjct: 484 FARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTL 543

Query: 291 VA--------------------------------VGNGLVNMYAKCG-TIDDSRSVFRFM 317
           V+                                V + ++NM AKCG ++D+   +F  M
Sbjct: 544 VSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARM 603

Query: 318 IG--KDSVSWNTMISGLDQNGCYEEAIMNFCAM-RRDGLMSSNFSLISTLSSCASLGWIM 374
               KD V+WNTMI+   Q+G   +A+  F  M +R  +   + + +S LS C+  G + 
Sbjct: 604 PDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVE 663

Query: 375 LGQQIHGEGLK---LGLDSD-VSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSV 429
            G  IH   L    LG++   V     L+ +    GYL         MP   D V W S+
Sbjct: 664 DG--IHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSL 721

Query: 430 IGA---FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
           +GA   + D E     A + ++++ R+  S   V   NI AAA
Sbjct: 722 LGACSSYGDLEG-GERAARAFIELYRSD-SVGYVVLSNIYAAA 762



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 90/190 (47%), Gaps = 16/190 (8%)

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           T A +L  C   A L +G ++H   V+  L  + ++G+ LV MYSKC  +D A+  F  +
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL---PDHVTFVGVLSACSHAGLVD 679
             R + +WN++I+  +          L+++MKL+      P+ +T + VL A +      
Sbjct: 86  RSRGIATWNTLIAAQSSPA---AVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSS 142

Query: 680 EGFKHFKSMSQ-------VYGLIPQLEQF--SCMVDLLGRAGELDKIEEFINKMPITPNS 730
                  S++Q       + G   + + F  + ++D  G+ G ++   E  +++ + P+ 
Sbjct: 143 SSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQV-PDL 201

Query: 731 LIWRTVLGAC 740
           + W   + AC
Sbjct: 202 ICWNAAIMAC 211


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 287/791 (36%), Positives = 435/791 (54%), Gaps = 98/791 (12%)

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
           +G +  Q +   V K+GL+  +Y+ + L++ +++ G   +ARK+F++M  +   S N ++
Sbjct: 28  NGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVL 87

Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
                                          YAK G +D S   F  +  +DSVSW TMI
Sbjct: 88  SA-----------------------------YAKRGDMDSSCEFFDRLPQRDSVSWTTMI 118

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
            G    G Y +AI     M R+G+  S F+L + L+S A+   +  G+++H   +KLGL 
Sbjct: 119 VGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLR 178

Query: 390 SDVSVSNALLSLYA-------------------------------DAGYLSRCLKVFFLM 418
            +VSVSN+LL++YA                                 G +   +  F  M
Sbjct: 179 GNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQM 238

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
            E D V+WNS+I  +      +     +   +R +  SP+  T  ++L+A ++     +G
Sbjct: 239 AERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIG 298

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCG------------------------------ 508
            Q+H+ ++         + NAL+S Y +CG                              
Sbjct: 299 EQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYI 358

Query: 509 ---EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
              +M++ + IF  + +R D V+W +MI GY  + L  +A+NL   M+   QR + +T A
Sbjct: 359 KLGDMNEAKNIFDSLKDR-DVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLA 417

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV- 624
            +LS  +S+A+L  G ++H   V++   + V + +AL+ MY+K G I  ASR FDL+   
Sbjct: 418 AMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCE 477

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           R+  SW SMI   A+HGH ++AL LF  M ++G  PDH+T+VGV SAC+HAGLV++G ++
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           F  M  V  +IP L  ++CMVDL GRAG L + +EFI KMPI P+ + W ++L AC    
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSAC--RV 595

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
            +  +LG+ AA  L  +EP+N+  Y  LAN+Y++ GKWE+ AK RK+MK+  VKKE G S
Sbjct: 596 YKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFS 655

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLV 864
           W+ +K  VH F   D  HP+K+ IY  +K++  +++  GYVP T   L DLE E KE ++
Sbjct: 656 WIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQIL 715

Query: 865 SYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
            +HSEK+A+AF +++   K  +RIMKNLRVC DCH+A KFISK+VGREI++RD+ RFHHF
Sbjct: 716 RHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHF 775

Query: 924 NDGKCSCGDYW 934
            DG CSC DYW
Sbjct: 776 KDGFCSCRDYW 786



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 162/597 (27%), Positives = 280/597 (46%), Gaps = 102/597 (17%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP---------------- 47
           A+L H +++K G  + V+L N L+NVY + G    A KLFDEMP                
Sbjct: 33  AQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAK 92

Query: 48  ---------------DRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSV 92
                           R+SVSW  ++ GY + G  ++A ++  EM+R G   +++ L +V
Sbjct: 93  RGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNV 152

Query: 93  LR--ACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC-------------- 136
           L   A   C     + G +VH  ++K     +  VSN L+ MY  C              
Sbjct: 153 LASVAATRC----LETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMV 208

Query: 137 ----------------LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
                           +   D A   FE++  RD+++WNS+IS Y+QRG  +    +FS+
Sbjct: 209 VKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSK 268

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M R+     L P+ +T  S+++A  +  L    + +QI + +   G      V +AL+S 
Sbjct: 269 MLRDSM---LSPDRFTLASVLSACAN--LEKLCIGEQIHSHIVTTGFDISGIVLNALISM 323

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
           ++R G    AR++ EQ   K++              ++ G+               L++ 
Sbjct: 324 YSRCGGVETARRLIEQRGTKDL--------------KIEGF-------------TALLDG 356

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           Y K G +++++++F  +  +D V+W  MI G +Q+G Y EAI  F +M  +    ++++L
Sbjct: 357 YIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTL 416

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP- 419
            + LS  +SL  +  G+QIHG  +K G    VSVSNAL+++YA AG ++   + F L+  
Sbjct: 417 AAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRC 476

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
           E D VSW S+I A A       EA++ +  M   G  P+ +T++ + +A +   +   G 
Sbjct: 477 ERDTVSWTSMIIALA-QHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR 535

Query: 480 QVHAQVIKYNVANETTIENA-LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           Q    +   +    T    A ++  +G+ G + + ++   +M    D V+W S++S 
Sbjct: 536 QYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 156/624 (25%), Positives = 280/624 (44%), Gaps = 114/624 (18%)

Query: 88  ALGSVLRAC-----QECGPSGFKFGMQ-VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD 141
           +L ++L  C     +    S  +F  Q VHC V+KS   F   + N L+ +Y     +  
Sbjct: 8   SLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALH 67

Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-QR----------------- 183
            AR++F+E+  R   SWN+++S Y++RGD  S  + F R+ QR                 
Sbjct: 68  -ARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQ 126

Query: 184 ---------EGFRYSLKPNEYTFGSLI--TAAYSSVLSGSYLLQQILAMVKKAGLLSDLY 232
                    E  R  ++P+++T  +++   AA   + +G    +++ + + K GL  ++ 
Sbjct: 127 YHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETG----KKVHSFIVKLGLRGNVS 182

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA 292
           V ++L++ +A+ G+   A+ +F++M+ K++ S                            
Sbjct: 183 VSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSW--------------------------- 215

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
             N ++ ++ + G +D + + F  M  +D V+WN+MISG +Q G    A+  F  M RD 
Sbjct: 216 --NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDS 273

Query: 353 LMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA-------- 403
           ++S + F+L S LS+CA+L  + +G+QIH   +  G D    V NAL+S+Y+        
Sbjct: 274 MLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETA 333

Query: 404 -------------------------DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
                                      G ++    +F  + + D V+W ++I  + +   
Sbjct: 334 RRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGY-EQHG 392

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
           L  EA+  +  M      PN  T   +L+ ASS +    G Q+H   +K       ++ N
Sbjct: 393 LYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSN 452

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
           AL++ Y K G +    + F  +   RD VSW SMI     +    +A+ L   M+  G R
Sbjct: 453 ALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLR 512

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS-----ALVDMYSKCGRID 613
            DH T+  V SAC     + +G +          + D +I +      +VD++ + G + 
Sbjct: 513 PDHITYVGVFSACTHAGLVNQGRQY----FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQ 568

Query: 614 YASRFFDLMPVR-NVYSWNSMISG 636
            A  F + MP+  +V +W S++S 
Sbjct: 569 EAQEFIEKMPIEPDVVTWGSLLSA 592


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 275/718 (38%), Positives = 421/718 (58%), Gaps = 17/718 (2%)

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLME------GRRKGKEV 278
           S +++ + ++S ++  GN+  +  +F+QM    I+ N  + + +++         +G++V
Sbjct: 214 SKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQV 273

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           HG + + G      V N L++ Y     +  ++ +F  +  +D +SWN+MISG  +NG  
Sbjct: 274 HGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLD 333

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG-LDSDVSVSNA 397
           +  I  F  M   G+     ++++   +CA++G ++LG+ +H   +K   LD +V  +N 
Sbjct: 334 DRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNT 393

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           LL +Y+  G L+  ++VF  M E   VSW S+I  +   E L   A+K + +M+  G  P
Sbjct: 394 LLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYV-REGLSDGAIKLFDEMKSRGVVP 452

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           +     +IL A +     K G  VH  + + N+   + + NAL   Y KCG M D   +F
Sbjct: 453 DVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVF 512

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
           + M +++D +SWN+MI GY  N L  +A+ L +  MQR  + D  T A +L ACAS+A L
Sbjct: 513 SHM-KKKDVISWNTMIGGYTKNSLPNEALTL-FAEMQRESKPDGTTVACILPACASLAAL 570

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
           ++G E+H   +R     D  + +A+VDMY KCG +  A   FD++P +++ SW  MI+GY
Sbjct: 571 DKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGY 630

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
             HG+G +A+  F+QM++ G  PD V+F+ +L ACSH+GL+DEG+K F  M +   + P 
Sbjct: 631 GMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPN 690

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
           LE ++CMVDLL R G L K  +FI  MPI P++ IW  +L   CR +    +L  K A  
Sbjct: 691 LEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCG-CRIH-HDVKLAEKVAER 748

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           +FE+EP+N   YVLLAN+YA   KWE+V K RK + +  +KK  GCSW+ +K  +++FVA
Sbjct: 749 IFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVA 808

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-V 876
           GD S P+   I   LK L  KM++ GY P+T +AL + +   KE  +  HSEK+A+AF +
Sbjct: 809 GDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGM 868

Query: 877 LTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           L       IR+ KNLRVCGDCH   KF+SK   REI+LRDS+RFHHF DG CSC  YW
Sbjct: 869 LNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 159/586 (27%), Positives = 265/586 (45%), Gaps = 59/586 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +D +     I   G   D  L   L+ +YV+ GDL     +FD++ +     W  ++S Y
Sbjct: 167 RDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEY 226

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G   E+  +FK+M+  G   N Y   S+L+       +  + G QVH L+ K     
Sbjct: 227 SGSGNYGESINLFKQMLELGIKPNSYTFSSILKCF--AAVARVEEGRQVHGLICKLGFNS 284

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V N LI+ Y        CA+++F+E+  RD+ISWNS+IS Y + G      ++F +M
Sbjct: 285 YNTVVNSLISFY-FVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKM 343

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILA--MVKKAGLLSDLYVGSALVS 239
              G    L        +++    +    G+ LL ++L    +K A L  ++   + L+ 
Sbjct: 344 LVFGVDIDL-------ATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLD 396

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR--------------------------- 272
            +++ G+   A ++FE+M +K VVS   ++ G                            
Sbjct: 397 MYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYA 456

Query: 273 --------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                         + GK VH Y+  + L     V N L +MYAKCG++ D+  VF  M 
Sbjct: 457 VTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMK 516

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            KD +SWNTMI G  +N    EA+  F  M+R+       ++   L +CASL  +  G++
Sbjct: 517 KKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGRE 575

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           IHG  L+ G   D  V+NA++ +Y   G L     +F ++P  D VSW  +I  +     
Sbjct: 576 IHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYG-MHG 634

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
             SEA+  +  MR  G  P+ V+FI+IL A S   +   G ++   ++K     E  +E+
Sbjct: 635 YGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIF-NIMKKECQIEPNLEH 693

Query: 499 --ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
              ++    + G +    K    M  + D   W +++ G  IH+++
Sbjct: 694 YACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDV 739



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 143/538 (26%), Positives = 249/538 (46%), Gaps = 64/538 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H  I K GF     + N+LI+ Y     +  A KLFDE+ DR+ +SW  ++SGY
Sbjct: 268 EEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGY 327

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G+ +   ++F +M+  G  ++   + +V  AC   G      G  +H   +K+  T 
Sbjct: 328 VKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGT--LLLGKVLHSYSIKA-ATL 384

Query: 122 DGLV--SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           D  V  +N L+ MY  C +  + A R+FE ++ + ++SW S+I+ Y + G +    KLF 
Sbjct: 385 DREVRFNNTLLDMYSKCGD-LNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFD 443

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQIL-AMVKKAGLLSDLYVGSALV 238
            M+  G    + P+ Y   S++ A     ++G+    +I+   +++  L ++ +V +AL 
Sbjct: 444 EMKSRG----VVPDVYAVTSILNAC---AINGNLKSGKIVHDYIRENNLETNSFVSNALT 496

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR------------------------- 273
             +A+ G+   A  +F  M +K+V+S N ++ G                           
Sbjct: 497 DMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRESKPDGTT 556

Query: 274 ---------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                          KG+E+HGY +R+G  +   V N +V+MY KCG +  +RS+F  + 
Sbjct: 557 VACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIP 616

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            KD VSW  MI+G   +G   EAI  F  MR  G+     S IS L +C+  G +  G +
Sbjct: 617 NKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWK 676

Query: 379 IHGEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI-GAFAD 435
           I     K   ++ ++     ++ L A  G L +  K    MP + D   W +++ G    
Sbjct: 677 IFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIH 736

Query: 436 SEALVSEAVK---YYLDMRRAGWSPNGVTFINILAAASSF-SMGKLGHQVHAQVIKYN 489
            +  ++E V    + L+    G+    V   NI A A  +  + KL  ++  + +K N
Sbjct: 737 HDVKLAEKVAERIFELEPENTGYY---VLLANIYAEAEKWEEVQKLRKKIGQRGLKKN 791


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 268/664 (40%), Positives = 396/664 (59%), Gaps = 9/664 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           +KG+E+HG +I +G    + V   ++++YAKC  ID++  +F  M  KD VSW T+++G 
Sbjct: 162 KKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGY 221

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            QNG  + A+     M+  G    + +L+S L + A +  + +G+ IHG   + G +S V
Sbjct: 222 AQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLV 281

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI-GAFADSEALVSEAVKYYLDMR 451
           +V+NALL +Y   G       VF  M     VSWN++I G   + E+   EA   +L M 
Sbjct: 282 NVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGES--EEAFATFLKML 339

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             G  P  VT + +L A ++    + G  VH  + K  + +  ++ N+L+S Y KC  +D
Sbjct: 340 DEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVD 399

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
               IF  +   +  V+WN+MI GY  N  + +A+NL   M  +G +LD FT   V++A 
Sbjct: 400 IAASIFNNL--EKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITAL 457

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           A  +   +   +H   VRAC++ +V + +ALVDMY+KCG I  A + FD+M  R+V +WN
Sbjct: 458 ADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWN 517

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           +MI GY  HG G + L LF++M+     P+ +TF+ V+SACSH+G V+EG   FKSM + 
Sbjct: 518 AMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQED 577

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
           Y L P ++ +S MVDLLGRAG+LD    FI +MPI P   +   +LGAC     +  ELG
Sbjct: 578 YYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGAC--KIHKNVELG 635

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
            KAA  LF+++P     +VLLAN+YAS   W+ VAK R AM++  + K  GCSWV +++ 
Sbjct: 636 EKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNE 695

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
           +H F +G  +HPE   IY  L+ L  +++ AGYVP    ++ D+E + K+ L+S HSE++
Sbjct: 696 IHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPD-SIHDVEEDVKKQLLSSHSERL 754

Query: 872 AVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           A+AF L   S    + I KNLRVCGDCH   K+IS + GREI++RD  RFHHF +G CSC
Sbjct: 755 AIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSC 814

Query: 931 GDYW 934
           GDYW
Sbjct: 815 GDYW 818



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 161/617 (26%), Positives = 285/617 (46%), Gaps = 75/617 (12%)

Query: 11  ILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEA 70
           I+K+GF  +      +I+++ + G  + A+++F+ +  +  V +  ++ GY       +A
Sbjct: 70  IIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDA 129

Query: 71  CKMFKEMVRAGFLLNRYALGSVLRACQECGPS-GFKFGMQVHCLVLKSNQTFDGLVSNVL 129
              F  M+       R  +G      Q CG +   K G ++H L++      +G  SN+ 
Sbjct: 130 LCFFLRMMCDEV---RLVVGDYACLLQLCGENLDLKKGREIHGLIIT-----NGFESNLF 181

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           +                             +++S+Y++     + +K+F RMQ +     
Sbjct: 182 VM---------------------------TAVMSLYAKCRQIDNAYKMFERMQHK----- 209

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
               +    + + A Y+        LQ +L M ++AG   D      LVS    + +   
Sbjct: 210 ----DLVSWTTLVAGYAQNGHAKRALQLVLQM-QEAGQKPD---SVTLVSILPAVAD--- 258

Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
                              M+  R G+ +HGY  RSG   +V V N L++MY KCG+   
Sbjct: 259 -------------------MKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARI 299

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +R VF+ M  K  VSWNTMI G  QNG  EEA   F  M  +G + +  +++  L +CA+
Sbjct: 300 ARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACAN 359

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           LG +  G  +H    KL LDS+VSV N+L+S+Y+    +     +F  + E   V+WN++
Sbjct: 360 LGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL-EKTNVTWNAM 418

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           I  +A +   V EA+  +  M+  G   +  T + ++ A + FS+ +    +H   ++  
Sbjct: 419 ILGYAQN-GCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRAC 477

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV 549
           + N   +  AL+  Y KCG +    K+F  M ER   ++WN+MI GY  + +  + ++L 
Sbjct: 478 MDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERH-VITWNAMIDGYGTHGVGKETLDLF 536

Query: 550 WFMMQRGQRLDHFTFATVLSACASVATLERGMEV-HACGVRACLEFDVVIGSALVDMYSK 608
             M +   + +  TF +V+SAC+    +E G+ +  +      LE  +   SA+VD+  +
Sbjct: 537 NEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGR 596

Query: 609 CGRIDYASRFFDLMPVR 625
            G++D A  F   MP++
Sbjct: 597 AGQLDDAWNFIQEMPIK 613



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 197/417 (47%), Gaps = 53/417 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H  I+ +GF  ++F+   ++++Y +   + +A K+F+ M  ++ VSW  +V+GY
Sbjct: 162 KKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGY 221

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G +  A ++  +M  AG   +   L S+L A  +      + G  +H    +S   F
Sbjct: 222 AQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADM--KALRIGRSIHGYAFRSG--F 277

Query: 122 DGL--VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           + L  V+N L+ MY  C  S   AR +F+ + ++ ++SWN++I   +Q G++   F  F 
Sbjct: 278 ESLVNVTNALLDMYFKC-GSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFL 336

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           +M  EG    +       G L+  A    L   + + ++L  +K   L S++ V ++L+S
Sbjct: 337 KMLDEG---EVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLK---LDSNVSVMNSLIS 390

Query: 240 GFARLGNFYYARKIFEQMIQKNVV--------SMNG----------LMEGR--------- 272
            +++      A  IF  + + NV         + NG          +M+ +         
Sbjct: 391 MYSKCKRVDIAASIFNNLEKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTL 450

Query: 273 -------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                        R+ K +HG  +R+ + + V V   LV+MYAKCG I  +R +F  M  
Sbjct: 451 VGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQE 510

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           +  ++WN MI G   +G  +E +  F  M++  +  ++ + +S +S+C+  G++  G
Sbjct: 511 RHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEG 567



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 105/195 (53%), Gaps = 1/195 (0%)

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
           +Q+   +IK    NE   +  ++S + K G   +  ++F  + E + +V ++ M+ GY  
Sbjct: 64  YQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHV-ELKLDVLYHIMLKGYAK 122

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
           N  L  A+     MM    RL    +A +L  C     L++G E+H   +    E ++ +
Sbjct: 123 NSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFV 182

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            +A++ +Y+KC +ID A + F+ M  +++ SW ++++GYA++GH  +AL L  QM+  G 
Sbjct: 183 MTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQ 242

Query: 659 LPDHVTFVGVLSACS 673
            PD VT V +L A +
Sbjct: 243 KPDSVTLVSILPAVA 257



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +V + N+LI++Y +   +  A+ +F+ + ++ +V+W  ++ GY   G   EA  +F  M 
Sbjct: 381 NVSVMNSLISMYSKCKRVDIAASIFNNL-EKTNVTWNAMILGYAQNGCVKEALNLFCMMQ 439

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQ---VHCLVLKSNQTFDGLVSNVLIAMYGS 135
             G  L+ + L  V+ A  +     F    Q   +H L +++    +  VS  L+ MY  
Sbjct: 440 SQGIKLDCFTLVGVITALAD-----FSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAK 494

Query: 136 CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
           C  +   AR++F+ ++ R +I+WN++I  Y   G       LF+ MQ+     ++KPN+ 
Sbjct: 495 C-GAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKG----AVKPNDI 549

Query: 196 TFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
           TF S+I+A ++S  +    LL +  +M +   L   +   SA+V    R G    A    
Sbjct: 550 TFLSVISACSHSGFVEEGLLLFK--SMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFI 607

Query: 255 EQMIQKNVVSMNGLMEG 271
           ++M  K  +S+ G M G
Sbjct: 608 QEMPIKPGISVLGAMLG 624



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 51/100 (51%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           ++ AK  H   ++     +VF+   L+++Y + G + +A KLFD M +R+ ++W  ++ G
Sbjct: 463 NRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDG 522

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           Y   G+  E   +F EM +     N     SV+ AC   G
Sbjct: 523 YGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSG 562


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 299/811 (36%), Positives = 454/811 (55%), Gaps = 75/811 (9%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           AR++FE++  ++ +S N +IS Y + G+     KLF                        
Sbjct: 71  ARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFD----------------------- 107

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM----I 258
                             MV++  +   + +G     G+++L  F  A ++F QM     
Sbjct: 108 -----------------GMVERTAVTWTILIG-----GYSQLNQFKEAFELFVQMQRCGT 145

Query: 259 QKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
           + + V+   L+ G        +  +V   +I+ G    + VGN LV+ Y K   +D +  
Sbjct: 146 EPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQ 205

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           +F+ M   DSVS+N MI+G  ++G  E+A+  F  M+  GL  + F+  + L  CA++G 
Sbjct: 206 LFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGL 263

Query: 373 --IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
             I+LGQQIH   +K     +V VSNALL  Y+    +    K+F  MPE D VS+N +I
Sbjct: 264 DDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVII 323

Query: 431 GAFA-DSEALVSEAVKYYLDMRR----AGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
             +A D +       KY  D+ R      +      F  +L+ AS+    ++G Q+HAQ 
Sbjct: 324 SGYAWDGKH------KYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQT 377

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
           I     +E  + N+L+  Y KCG+ ++ E IF  ++  R  V W +MIS Y+      + 
Sbjct: 378 IVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLT-HRSAVPWTAMISAYVQKGFYEEG 436

Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
           + L   M Q     D  TFA++L A AS+A+L  G ++H+  +++    +V  GSAL+D+
Sbjct: 437 LQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDV 496

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
           Y+KCG I  A + F  MP RN+ SWN+MIS YA++G  +  L  F +M L G  PD V+F
Sbjct: 497 YAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSF 556

Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
           +GVLSACSH+GLV+EG  HF SM+Q+Y L P+ E ++ +VD+L R+G  ++ E+ + +MP
Sbjct: 557 LGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMP 616

Query: 726 ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP-QNAVNYVLLANMYASGGKWED 784
           I P+ ++W +VL A CR + +  EL R+AA+ LF ME  ++A  YV ++N+YA+ G+WE+
Sbjct: 617 IDPDEIMWSSVLNA-CRIH-KNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWEN 674

Query: 785 VAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGY 844
           V+K  KAM++  VKK    SWV +K   H+F A D  HP+ + I +K+  L + M + GY
Sbjct: 675 VSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGY 734

Query: 845 VPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKF 903
            P T  AL + + + K + + YHSE++A+AF L    +  PI +MKNLR C DCH+A K 
Sbjct: 735 KPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKV 794

Query: 904 ISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           ISKIVGREI +RDS RFHHF DG CSCGD+W
Sbjct: 795 ISKIVGREITVRDSTRFHHFRDGFCSCGDFW 825



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 160/579 (27%), Positives = 283/579 (48%), Gaps = 65/579 (11%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N +I+ YV+ G+L  A KLFD M +R +V+W  ++ GY+      EA ++F +M R G  
Sbjct: 87  NMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTE 146

Query: 84  LNRYALGSVLRACQECGPSGFKFG---MQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST 140
            +     ++L  C     +G + G    QV   ++K       +V N L+  Y       
Sbjct: 147 PDYVTFVTLLSGC-----NGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKS-NRL 200

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
           D A ++F+E+   D +S+N++I+ YS+ G       LF  MQ  G    LKP E+TF ++
Sbjct: 201 DLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSG----LKPTEFTFAAV 256

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
           + A     L    L QQI + V K   + +++V +AL+  +++  +   ARK+F++M ++
Sbjct: 257 LCANIG--LDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQ 314

Query: 261 NVVSMNGLMEG-----------------------RRK------------------GKEVH 279
           + VS N ++ G                       R++                  G+++H
Sbjct: 315 DGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIH 374

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
              I +     + VGN LV+MYAKCG  +++  +F  +  + +V W  MIS   Q G YE
Sbjct: 375 AQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYE 434

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           E +  F  MR+  +++   +  S L + AS+  + LG+Q+H   +K G  S+V   +ALL
Sbjct: 435 EGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALL 494

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
            +YA  G +   ++ F  MP+ + VSWN++I A+A +       +K + +M  +G  P+ 
Sbjct: 495 DVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQN-GEAEATLKSFKEMVLSGLQPDS 553

Query: 460 VTFINILAAASSFSMGKLG---HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           V+F+ +L+A S   + + G        Q+ K +   E       + C  + G  ++ EK+
Sbjct: 554 VSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLC--RSGRFNEAEKL 611

Query: 517 FARMSERRDEVSWNSMISG---YIHNELLPKAMNLVWFM 552
            A M    DE+ W+S+++    + + EL  +A + ++ M
Sbjct: 612 MAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNM 650



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 149/581 (25%), Positives = 268/581 (46%), Gaps = 59/581 (10%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           QI+K G+   + + NTL++ Y +   L  A +LF EMP+ +SVS+  +++GY+  G+  +
Sbjct: 174 QIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEK 233

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
           A  +F EM  +G     +   +VL  C   G      G Q+H  V+K+N  ++  VSN L
Sbjct: 234 AVNLFVEMQNSGLKPTEFTFAAVL--CANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNAL 291

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           +  Y S  +S   AR++F+E+  +D +S+N IIS Y+  G     F LF  +Q   F   
Sbjct: 292 LDFY-SKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAF--- 347

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
               ++ F ++++ A +++     + +QI A        S++ VG++LV  +A+ G F  
Sbjct: 348 -DRKQFPFATMLSIASNTL--DWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEE 404

Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRK----------------------------------- 274
           A  IF  +  ++ V    ++    +                                   
Sbjct: 405 AEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASAS 464

Query: 275 ------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
                 GK++H ++I+SG    V  G+ L+++YAKCG+I D+   F+ M  ++ VSWN M
Sbjct: 465 IASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAM 524

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-G 387
           IS   QNG  E  + +F  M   GL   + S +  LS+C+  G +  G        ++  
Sbjct: 525 ISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYK 584

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA--FADSEALVSEAV 444
           LD       +++ +   +G  +   K+   MP + D++ W+SV+ A     ++ L   A 
Sbjct: 585 LDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAA 644

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSF-SMGKLGHQVHAQVIKYNVAN---ETTIENAL 500
               +M     +   V   NI AAA  + ++ K+   +  + +K   A    E   E  +
Sbjct: 645 DQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHM 704

Query: 501 LSCYGKC-GEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
            S   +C  ++++  K    +++  +E+ +    S  +HNE
Sbjct: 705 FSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNE 745



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 52/96 (54%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  I+K GF  +VF  + L++VY + G +  A + F EMPDRN VSW  ++S Y   
Sbjct: 472 KQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQN 531

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G +    K FKEMV +G   +  +   VL AC   G
Sbjct: 532 GEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSG 567



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 58/216 (26%)

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH-GD-- 644
           V+   + D    +  V  + K G +  A + F+ MP +N  S N MISGY + G+ G+  
Sbjct: 44  VKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEAR 103

Query: 645 ----------------------------KALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
                                       +A  LF QM+  G  PD+VTFV +LS C+   
Sbjct: 104 KLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCN--- 160

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFS------CMVDLLGRAGELDKIEEFINKMP----I 726
               G +    ++QV   I +L   S       +VD   ++  LD   +   +MP    +
Sbjct: 161 ----GHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSV 216

Query: 727 TPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
           + N++I              K  L  KA N+  EM+
Sbjct: 217 SYNAMI----------TGYSKDGLDEKAVNLFVEMQ 242


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 299/784 (38%), Positives = 438/784 (55%), Gaps = 68/784 (8%)

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY 213
           D++ WN  I+ + + G   S  +LF+ M R   R S+  N    G L    +       Y
Sbjct: 48  DIVKWNIAITNHMRNGQCDSALRLFNSMPR---RSSISWNAMISGCLSNDKF-------Y 97

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR 273
           L +Q+   +       DL   + ++SG  R  N   AR +F+QM +++VVS N ++ G  
Sbjct: 98  LARQLFEKMPT----RDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSG-- 151

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
                                      YA+ G + +++ +F  M  K+S+SWN M++   
Sbjct: 152 ---------------------------YAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYV 184

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           QNG  E+A       RR     +++ LIS   +C   G++   + +   G+   +     
Sbjct: 185 QNGRIEDA-------RRLFESKADWELISW--NCMMGGYVKRNRLVDARGIFDRMPERDE 235

Query: 394 VS-NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
           VS N ++S YA  G L    ++F   P  D  +W +++  +  +  ++ EA + +  M  
Sbjct: 236 VSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQN-GMLDEARRVFDGMP- 293

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
                N V++  I+A            ++   +   NV++     N +++ Y + G++  
Sbjct: 294 ---EKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSW----NTMITGYAQNGDIAQ 346

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
               F RM +R D +SW ++I+GY  +    +A++L   M + G+RL+  TF + LS CA
Sbjct: 347 ARNFFDRMPQR-DSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCA 405

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
            +A LE G +VH   V+A LE    +G+AL+ MY KCG ID A   F+ +  + V SWN+
Sbjct: 406 EIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNT 465

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           MI+GYARHG G +AL LF  MK  G LPD VT VGVLSACSH GLVD+G ++F SM+Q Y
Sbjct: 466 MIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDY 525

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELG 751
           G+    + ++CM+DLLGRAG LD  +  +  MP  P++  W  +LGA     N   TELG
Sbjct: 526 GITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGN---TELG 582

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
            KAA M+FEMEP N+  YVLL+N+YA+ G+W DV + R  M++  VKK  G SWV +++ 
Sbjct: 583 EKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNK 642

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
           +H F  GD  HPE+D IY  L+EL+ KM+  GYV  TK  L D+E E K  ++ YHSEK+
Sbjct: 643 IHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKL 702

Query: 872 AVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           AVAF +L   +  PIR++KNLRVC DCH+A K ISKIVGR I+LRDS+RFHHFN G+CSC
Sbjct: 703 AVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSC 762

Query: 931 GDYW 934
           GDYW
Sbjct: 763 GDYW 766



 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 147/563 (26%), Positives = 257/563 (45%), Gaps = 47/563 (8%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+   N  I  ++R G   SA +LF+ MP R+S+SW  ++SG         A ++F++M 
Sbjct: 48  DIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMP 107

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
               +     +   +R  +    +   F       V+  N    G   N  +       +
Sbjct: 108 TRDLVSWNVMISGCVRY-RNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFD 166

Query: 139 STDC---------------------ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
              C                     ARR+FE     +LISWN ++  Y +R   +    +
Sbjct: 167 EMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGI 226

Query: 178 FSRMQREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS 235
           F RM           +E ++ ++I+  A    +L    L ++          + D++  +
Sbjct: 227 FDRMPER--------DEVSWNTMISGYAQNGELLEAQRLFEE--------SPVRDVFTWT 270

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY--LIRSGLFDMVAV 293
           A+VSG+ + G    AR++F+ M +KN VS N ++ G  + K +     L  +     V+ 
Sbjct: 271 AMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSS 330

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
            N ++  YA+ G I  +R+ F  M  +DS+SW  +I+G  Q+G  EEA+  F  M+RDG 
Sbjct: 331 WNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGE 390

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
             +  +  STLS+CA +  + LG+Q+HG  +K GL+S   V NALL +Y   G +     
Sbjct: 391 RLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYI 450

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           VF  + E + VSWN++I  +A       EA+  +  M++ G  P+ VT + +L+A S   
Sbjct: 451 VFEGIEEKEVVSWNTMIAGYA-RHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTG 509

Query: 474 MGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
           +   G +  ++    Y +   +     ++   G+ G +DD + +   M    D  +W ++
Sbjct: 510 LVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGAL 569

Query: 533 I-SGYIH--NELLPKAMNLVWFM 552
           + +  IH   EL  KA  +++ M
Sbjct: 570 LGASRIHGNTELGEKAAKMIFEM 592



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 139/292 (47%), Gaps = 14/292 (4%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           NT+I  Y + GD+A A   FD MP R+S+SWA I++GY   G   EA  +F EM R G  
Sbjct: 332 NTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGER 391

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           LNR    S L  C E   +  + G QVH  V+K+       V N L+ MY  C  + D A
Sbjct: 392 LNRSTFTSTLSTCAEI--AALELGKQVHGRVVKAGLESGCYVGNALLVMYCKC-GNIDDA 448

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
             +FE IE ++++SWN++I+ Y++ G       LF  M++ G    + P++ T   +++A
Sbjct: 449 YIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTG----ILPDDVTMVGVLSA 504

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNV 262
              + L      +   +M +  G+ ++    + ++    R G    A+ + + M  + + 
Sbjct: 505 CSHTGLVDKG-TEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDA 563

Query: 263 VSMNGLMEGRR-KGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDD 309
            +   L+   R  G    G      +F+M    +G    L N+YA  G   D
Sbjct: 564 ATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGD 615



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 151/358 (42%), Gaps = 66/358 (18%)

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI-GAFADSEALVSEAV 444
           L  D+D+   N  ++ +   G     L++F  MP    +SWN++I G  ++ +  ++  +
Sbjct: 43  LATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQL 102

Query: 445 KYYLDMRR-AGWS---PNGVTFINILAAASSFSM----------------GKLGHQVHAQ 484
              +  R    W+      V + N+ AA   F                   + G+   A+
Sbjct: 103 FEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAK 162

Query: 485 VIKYNVANETTIE-NALLSCYGKCGEMDDCEK---------------------------- 515
            I   +  + +I  N +L+ Y + G ++D  +                            
Sbjct: 163 EIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVD 222

Query: 516 ---IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
              IF RM E RDEVSWN+MISGY  N  L +A  L     +     D FT+  ++S   
Sbjct: 223 ARGIFDRMPE-RDEVSWNTMISGYAQNGELLEAQRL----FEESPVRDVFTWTAMVSGYV 277

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
               L+    V         E + V  +A++  Y +C R+D A   F+ MP +NV SWN+
Sbjct: 278 QNGMLDEARRV----FDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNT 333

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           MI+GYA++G   +A   F +M    P  D +++  +++  + +G  +E    F  M +
Sbjct: 334 MITGYAQNGDIAQARNFFDRM----PQRDSISWAAIIAGYAQSGYGEEALHLFVEMKR 387



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 50/97 (51%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H +++K G     ++ N L+ +Y + G++  A  +F+ + ++  VSW  +++GY  
Sbjct: 413 GKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYAR 472

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G   EA  +F+ M + G L +   +  VL AC   G
Sbjct: 473 HGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTG 509


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 277/684 (40%), Positives = 399/684 (58%), Gaps = 16/684 (2%)

Query: 257 MIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA---VGNGLVNMYAKCGTIDDSRSV 313
           ++ KN +S + +    R G+ VH  ++++   D      + N L+NMY+K    + +R V
Sbjct: 11  LLLKNAISTSSM----RLGRVVHARIVKT--LDSPPPPFLANYLINMYSKLDHPESARLV 64

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
            R    ++ VSW +++SGL QNG +  A+  F  MRR+G+  ++F+      + ASL   
Sbjct: 65  LRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLP 124

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
           + G+QIH   +K G   DV V  +   +Y          K+F  +PE +  +WN+ I   
Sbjct: 125 VTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISN- 183

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE 493
           + ++    EA++ +++ RR G  PN +TF   L A S   +  LG Q+H  V +     +
Sbjct: 184 SVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTD 243

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM 553
            ++ N L+  YGKC ++   E IFA M   ++ VSW S+++ Y+ N    KA  L     
Sbjct: 244 VSVYNGLIDFYGKCKQIRSSEIIFAEMG-MKNAVSWCSLVAAYVQNHEDEKASVLYLRSR 302

Query: 554 QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID 613
           +       F  ++VLSACA +A LE G  +HA  V+AC+E ++ +GSALVDMY KCG I+
Sbjct: 303 KEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIE 362

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG--PLPDHVTFVGVLSA 671
            + + FD MP +N+ + NS+I GYA  G  D AL LF  M   G  P P+++TFV +LSA
Sbjct: 363 DSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSA 422

Query: 672 CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
           CS AG V+ G K F SM   YG+ P  E +SC+VD+LGRAG +++  EFI KMPI P   
Sbjct: 423 CSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTIS 482

Query: 732 IWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKA 791
           +W  +  AC      K  LG  AA  LF+++P+++ N+VLL+N +A+ G+W +    R+ 
Sbjct: 483 VWGALQNACRMHG--KPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREE 540

Query: 792 MKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFA 851
           MK   +KK AG SW+T+K+ VH F A D SH     I   L +L  KM  AGY P  K +
Sbjct: 541 MKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLS 600

Query: 852 LFDLEPESKEDLVSYHSEKIAVAFVLTRNS-KLPIRIMKNLRVCGDCHSAFKFISKIVGR 910
           L+DLE E K   VS+HSEK+A+AF L      +PIRI KNLR+CGDCHS FKF+S  V R
Sbjct: 601 LYDLEEEEKAAEVSHHSEKLALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKR 660

Query: 911 EIVLRDSNRFHHFNDGKCSCGDYW 934
           EI++RD+NRFH F DG CSC DYW
Sbjct: 661 EIIVRDNNRFHRFKDGICSCKDYW 684



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 191/458 (41%), Gaps = 56/458 (12%)

Query: 21  FLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRA 80
           FL N LIN+Y ++    SA  +    P RN VSW  +VSG    G  + A   F EM R 
Sbjct: 43  FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRRE 102

Query: 81  GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST 140
           G   N +    V +A           G Q+H L +K  +  D  V      MY       
Sbjct: 103 GVAPNDFTFPCVFKAVASLRLP--VTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRD 160

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
           D AR++F+EI  R+L +WN+ IS     G      + F   +R G     +PN  TF   
Sbjct: 161 D-ARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGG----QPNSITFCGF 215

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
           + A    +L    L  Q+  +V ++G  +D+ V + L+  + +      +  IF +M  K
Sbjct: 216 LNACSDGLLLD--LGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMK 273

Query: 261 NVVSMNGL-----------------------------------------MEGRRKGKEVH 279
           N VS   L                                         M G   G+ +H
Sbjct: 274 NAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIH 333

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
            + +++ +   + VG+ LV+MY KCG I+DS   F  M  K+ V+ N++I G    G  +
Sbjct: 334 AHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVD 393

Query: 340 EAIMNF--CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK--LGLDSDVSVS 395
            A+  F   A R  G   +  + +S LS+C+  G +  G +I  + +K   G++      
Sbjct: 394 MALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIF-DSMKSTYGIEPGAEHY 452

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
           + ++ +   AG + +  +    MP    +S W ++  A
Sbjct: 453 SCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNA 490



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 166/355 (46%), Gaps = 32/355 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   +K G   DVF+  +  ++Y +      A KLFDE+P+RN  +W   +S     
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTD 187

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSG--FKFGMQVHCLVLKSNQTFD 122
           G   EA + F E  R G   N       L AC +    G     GMQ+H LV +S    D
Sbjct: 188 GRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSD----GLLLDLGMQMHGLVFRSGFDTD 243

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V N LI  YG C +    +  IF E+  ++ +SW S+++ Y Q  +      L+ R +
Sbjct: 244 VSVYNGLIDFYGKC-KQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSR 302

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           +E     ++ +++   S+++A     ++G  L + I A   KA +  +++VGSALV  + 
Sbjct: 303 KE----IVETSDFMISSVLSACAG--MAGLELGRSIHAHAVKACVERNIFVGSALVDMYG 356

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLF-DMVAVGNG----- 296
           + G    + + F++M +KN+V++N L+ G     +V   L    LF DM   G G     
Sbjct: 357 KCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMAL---ALFEDMAPRGCGPAPNY 413

Query: 297 -----LVNMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA 341
                L++  ++ G +++   +F  M     I   +  ++ ++  L + G  E+A
Sbjct: 414 MTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQA 468


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 324/967 (33%), Positives = 494/967 (51%), Gaps = 69/967 (7%)

Query: 22   LCNTLINVYVRVGDLASASKLFDEMPDR--NSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
            L   L+  Y++ GDL  A  +FD MP +  +   W  ++S Y   G   EA  +F++M  
Sbjct: 138  LGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQC 197

Query: 80   AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
             G   + +A+  VL+     G      G  +H L+ K        V+N LIA+Y  C   
Sbjct: 198  CGVSPDAHAVSCVLKCVSSLG--SLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRM 255

Query: 140  TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
             D AR +F+ +  RD ISWNS+I      G   +   LFS+M  +G   S      T  S
Sbjct: 256  EDAAR-VFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEIS----SVTVLS 310

Query: 200  LITAAYSSVLSGSYLLQQILAMVKKAGLL----------SDLYVGSALVSGFARLGNFYY 249
            ++ A     L    + + +     K+GLL           D  +GS LV  + + G+   
Sbjct: 311  VLPACAG--LGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMAS 368

Query: 250  ARKIFEQMIQK-NVVSMNGLMEG------------------------------------- 271
            AR++F+ M  K NV   N +M G                                     
Sbjct: 369  ARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCIT 428

Query: 272  ----RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
                 R G   HGY+++ G     AV N L++ YAK   I D+  VF  M  +D++SWN+
Sbjct: 429  CLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNS 488

Query: 328  MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
            +ISG   NG   EAI  F  M   G    + +L+S L +CA   +   G+ +HG  +K G
Sbjct: 489  VISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTG 548

Query: 388  LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
            L  + S++NALL +Y++        ++F  M + + VSW ++I ++  +  L  +     
Sbjct: 549  LIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRA-GLFDKVAGLL 607

Query: 448  LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
             +M   G  P+     + L A +     K G  VH   I+  +     + NAL+  Y KC
Sbjct: 608  QEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKC 667

Query: 508  GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
              +++   IF R++ + D +SWN++I GY  N    ++ +L   M+ +  R +  T   +
Sbjct: 668  RNVEEARLIFDRVTNK-DVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCI 725

Query: 568  LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
            L A AS+++LERG E+HA  +R     D    +ALVDMY KCG +  A   FD +  +N+
Sbjct: 726  LPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNL 785

Query: 628  YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
             SW  MI+GY  HG G  A+ LF QM+  G  PD  +F  +L AC H+GL  EG + FK+
Sbjct: 786  ISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKA 845

Query: 688  MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
            M + Y + P+L+ ++C+VDLL R G+L +  EFI  MPI P+S IW ++L   CR + + 
Sbjct: 846  MQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHG-CRIH-KN 903

Query: 748  TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
             +L  K A+ +F++EP+N   YVLLAN+YA   +WE V K +  +    +++  G SW+ 
Sbjct: 904  VKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIE 963

Query: 808  MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
            ++  VHVF+A + +HP+ + I E L ++ ++MR  G+ P+ K+AL   +    ++ +  H
Sbjct: 964  VRSKVHVFIADNRNHPDWNRIAEFLDDVARRMRQEGHDPKKKYALMGADDAVHDEALCGH 1023

Query: 868  SEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
            S K+AVAF VL      PIR+ KN +VC  CH A KFISK+  REI+LRDS+RFH F  G
Sbjct: 1024 SSKLAVAFGVLNLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHRFEGG 1083

Query: 927  KCSCGDY 933
            +CSC  Y
Sbjct: 1084 RCSCRGY 1090



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 171/701 (24%), Positives = 313/701 (44%), Gaps = 84/701 (11%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + ++ H  + K G      + N LI VY R G +  A+++FD M  R+++SW  ++ G  
Sbjct: 222 EGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCF 281

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGM---QVHCLVLKSNQ 119
             G    A  +F +M   G  ++   + SVL AC     +G  +G+    VH   +KS  
Sbjct: 282 SNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPAC-----AGLGYGLIGKAVHGYSVKSGL 336

Query: 120 TF----------DGLVSNVLIAMYGSCLESTDCARRIFEEIETR-DLISWNSIISVYSQR 168
            +          D  + + L+ MY  C +    ARR+F+ + ++ ++  WN I+  Y++ 
Sbjct: 337 LWGLDSVQSGIDDAALGSKLVFMYVKCGDMAS-ARRVFDAMSSKGNVHVWNLIMGGYAKV 395

Query: 169 GDTISVFKLFSRMQREGFRYSLKPNEYTFGSL------ITAAYSSVLSGSYLLQQILAMV 222
           G+      LF +M   G    + P+E+    L      ++ A   +++  Y++       
Sbjct: 396 GEFEESLSLFVQMHELG----IAPDEHAISCLLKCITCLSCARDGLVAHGYIV------- 444

Query: 223 KKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------- 274
            K G  +   V +AL+S +A+      A  +F +M +++ +S N ++ G           
Sbjct: 445 -KLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAI 503

Query: 275 ---------------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMY 301
                                            G+ VHGY +++GL    ++ N L++MY
Sbjct: 504 ELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMY 563

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
           + C     +  +FR M  K+ VSW  MI+   + G +++       M  DG+    F++ 
Sbjct: 564 SNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVT 623

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S L + A    +  G+ +HG  ++ G++  + V+NAL+ +Y     +     +F  +   
Sbjct: 624 SALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNK 683

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D +SWN++IG ++ +    +E+   + DM    + PN VT   IL AA+S S  + G ++
Sbjct: 684 DVISWNTLIGGYSRNN-FPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGREI 741

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           HA  ++     ++   NAL+  Y KCG +     +F R++ +++ +SW  MI+GY  +  
Sbjct: 742 HAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLT-KKNLISWTIMIAGYGMHGF 800

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-VHACGVRACLEFDVVIGS 600
              A+ L   M   G   D  +F+ +L AC        G     A      +E  +   +
Sbjct: 801 GKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYT 860

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYARH 640
            +VD+ S+ G +  A  F + MP+    S W S++ G   H
Sbjct: 861 CIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIH 901



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 216/478 (45%), Gaps = 63/478 (13%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           ++D  + H  I+K GF     +CN LI+ Y +   +  A  +F+ MP ++++SW  ++SG
Sbjct: 433 ARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISG 492

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKF-GMQVHCLVLKSNQ 119
            +  G+++EA ++F  M   G  L+   L SVL AC +   S + F G  VH   +K+  
Sbjct: 493 CSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQ---SRYWFAGRVVHGYSVKTGL 549

Query: 120 TFDGLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
             +  ++N L+ MY +C   +ST+   +IF  +  ++++SW ++I+ Y + G    V  L
Sbjct: 550 IGETSLANALLDMYSNCSDWQSTN---QIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGL 606

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVG 234
              M  +G R    P+ +   S + A      +G   L+Q   +     + G+   L V 
Sbjct: 607 LQEMVLDGIR----PDVFAVTSALHA-----FAGDESLKQGKSVHGYTIRNGMEKLLPVA 657

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------------------- 272
           +AL+  + +  N   AR IF+++  K+V+S N L+ G                       
Sbjct: 658 NALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQFRP 717

Query: 273 ------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                              +G+E+H Y +R G  +     N LV+MY KCG +  +R +F
Sbjct: 718 NAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLF 777

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             +  K+ +SW  MI+G   +G  + AI  F  MR  G+     S  + L +C   G   
Sbjct: 778 DRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAA 837

Query: 375 LGQQIHGEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI 430
            G++      K   ++  +     ++ L +  G L   L+    MP E D   W S++
Sbjct: 838 EGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLL 895



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 129/280 (46%), Gaps = 14/280 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H   +++G    + + N L+ +YV+  ++  A  +FD + +++ +SW  ++ GY
Sbjct: 636 KQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGY 695

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +     NE+  +F +M+   F  N   +  +L A      S  + G ++H   L+     
Sbjct: 696 SRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASI--SSLERGREIHAYALRRGFLE 752

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D   SN L+ MY  C  +   AR +F+ +  ++LISW  +I+ Y   G       LF +M
Sbjct: 753 DSYASNALVDMYVKC-GALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQM 811

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLS--GSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           +  G    ++P+  +F +++ A   S L+  G    +   AM K+  +   L   + +V 
Sbjct: 812 RGSG----IEPDAASFSAILYACCHSGLAAEGRRFFK---AMQKEYKIEPKLKHYTCIVD 864

Query: 240 GFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEV 278
             +R G+   A +  E M I+ +      L+ G R  K V
Sbjct: 865 LLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNV 904



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 10/189 (5%)

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV-----VIGSALVDMYSKCGRID 613
           +D  ++  V+  C    +LE     HA  +RA           V+G  LV  Y KCG + 
Sbjct: 95  VDVRSYCMVVQLCGEERSLEAAKRAHAL-IRASSAAATGGKGSVLGKRLVLAYLKCGDLG 153

Query: 614 YASRFFDLMPVR--NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
            A   FD MP +  +V  W S++S YA+ G   +A++LF QM+  G  PD      VL  
Sbjct: 154 EARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKC 213

Query: 672 CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
            S  G + EG +    + +  GL       + ++ +  R G ++      + M    +++
Sbjct: 214 VSSLGSLTEG-EVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMH-PRDAI 271

Query: 732 IWRTVLGAC 740
            W +++G C
Sbjct: 272 SWNSMIGGC 280


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 298/815 (36%), Positives = 450/815 (55%), Gaps = 81/815 (9%)

Query: 193  NEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG--LLSDLYVGSALVSGFARLGNFYYA 250
            + + F +++ AA  + +    L +QI A V K G    S + V ++LV+ + + G+   A
Sbjct: 329  DNFAFPAVLKAA--AAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAA 386

Query: 251  RKIFEQMIQKNVVSMNGLME---------------------------------------- 270
            R++F+ +  ++ VS N ++                                         
Sbjct: 387  RQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHV 446

Query: 271  --GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
              G R GK+VH Y +R+G        N LV MYA+ G ++D++++F    GKD VSWNT+
Sbjct: 447  RGGVRLGKQVHAYTLRNGDL-RTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTV 505

Query: 329  ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG- 387
            IS L QN  +EEA+M    M  DG+     +L S L +C+ L  + +G++IH   L+ G 
Sbjct: 506  ISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGD 565

Query: 388  LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
            L  +  V  AL+ +Y +     +   VF  +       WN+++  +A +E    +A++ +
Sbjct: 566  LIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNE-FDDQALRLF 624

Query: 448  LDM-RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
            ++M   + + PN  TF ++L A     +      +H  ++K     +  ++NAL+  Y +
Sbjct: 625  VEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSR 684

Query: 507  CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ--------- 557
             G ++  + IF RM+ +RD VSWN+MI+G I       A+NL+   MQR Q         
Sbjct: 685  MGRVEISKTIFGRMN-KRDIVSWNTMITGCIVCGRYDDALNLL-HEMQRRQGEDGSDTFV 742

Query: 558  ----------RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
                      + +  T  TVL  CA++A L +G E+HA  V+  L  DV +GSALVDMY+
Sbjct: 743  DYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYA 802

Query: 608  KCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP------LPD 661
            KCG ++ ASR FD MP+RNV +WN +I  Y  HG G++AL LF  M   G        P+
Sbjct: 803  KCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPN 862

Query: 662  HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
             VT++ + +ACSH+G+VDEG   F +M   +G+ P+ + ++C+VDLLGR+G + +  E I
Sbjct: 863  EVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELI 922

Query: 722  NKMPITPNSL-IWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
            N MP   N +  W ++LGAC R + +  E G  AA  LF +EP  A +YVL++N+Y+S G
Sbjct: 923  NTMPSNLNKVDAWSSLLGAC-RIH-QSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAG 980

Query: 781  KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
             W+     RK MKE  V+KE GCSW+   D VH F++GD SHP+   ++E L+ L+Q+MR
Sbjct: 981  LWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMR 1040

Query: 841  DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHS 899
              GYVP     L +++ E KE ++  HSE++A+AF +L       IR+ KNLRVC DCH 
Sbjct: 1041 KEGYVPDISCVLHNVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHV 1100

Query: 900  AFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            A K ISKIV REI+LRD  RFHHF +G CSCGDYW
Sbjct: 1101 ATKIISKIVDREIILRDVRRFHHFANGTCSCGDYW 1135



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 159/601 (26%), Positives = 268/601 (44%), Gaps = 81/601 (13%)

Query: 4   AKLFHLQILKHGFA--YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
            K  H  + K G A    V + N+L+N+Y + GDL +A ++FD++PDR+ VSW  +++  
Sbjct: 349 GKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATL 408

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                   +  +F+ M+        + L SV  AC      G + G QVH   L+ N   
Sbjct: 409 CRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVR-GGVRLGKQVHAYTLR-NGDL 466

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
               +N L+ MY       D A+ +F   + +DL+SWN++IS  SQ             M
Sbjct: 467 RTYTNNALVTMYARLGRVND-AKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLM 525

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG-LLSDLYVGSALVSG 240
             +G R    P+  T  S++ A   S L    + ++I     + G L+ + +VG+ALV  
Sbjct: 526 IVDGVR----PDGVTLASVLPAC--SQLERLRIGREIHCYALRNGDLIENSFVGTALVDM 579

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG------------------------- 275
           +         R +F+ ++++ V   N L+ G  +                          
Sbjct: 580 YCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATT 639

Query: 276 ----------------KE-VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                           KE +HGY+++ G      V N L++MY++ G ++ S+++F  M 
Sbjct: 640 FASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMN 699

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR----DG--------------LMSSNFSL 360
            +D VSWNTMI+G    G Y++A+     M+R    DG                 ++ +L
Sbjct: 700 KRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTL 759

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           ++ L  CA+L  +  G++IH   +K  L  DV+V +AL+ +YA  G L+   +VF  MP 
Sbjct: 760 MTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPI 819

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS------PNGVTFINILAAASSFSM 474
            + ++WN +I A+        EA++ +  M   G S      PN VT+I I AA S   M
Sbjct: 820 RNVITWNVLIMAYG-MHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGM 878

Query: 475 GKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV-SWNSM 532
              G H  H     + V         L+   G+ G + +  ++   M    ++V +W+S+
Sbjct: 879 VDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSL 938

Query: 533 I 533
           +
Sbjct: 939 L 939



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 218/454 (48%), Gaps = 37/454 (8%)

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W  ++     +  + +AI  + AM        NF+  + L + A++  + LG+QIH    
Sbjct: 298 WIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVF 357

Query: 385 KLG--LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
           K G    S V+V+N+L+++Y   G L+   +VF  +P+ D VSWNS+I      E     
Sbjct: 358 KFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEW-EL 416

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMG-KLGHQVHAQVIKYNVANETTIENALL 501
           ++  +  M      P   T +++  A S    G +LG QVHA  ++ N    T   NAL+
Sbjct: 417 SLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLR-NGDLRTYTNNALV 475

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
           + Y + G ++D + +F  + + +D VSWN++IS    N+   +A+  V+ M+  G R D 
Sbjct: 476 TMYARLGRVNDAKALFG-VFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDG 534

Query: 562 FTFATVLSACASVATLERGMEVHACGVR-ACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
            T A+VL AC+ +  L  G E+H   +R   L  +  +G+ALVDMY  C +       FD
Sbjct: 535 VTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFD 594

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACS------ 673
            +  R V  WN++++GYAR+   D+AL LF +M  +    P+  TF  VL AC       
Sbjct: 595 GVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFS 654

Query: 674 -----HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITP 728
                H  +V  GF   K +             + ++D+  R G ++  +    +M    
Sbjct: 655 DKEGIHGYIVKRGFGKDKYVQ------------NALMDMYSRMGRVEISKTIFGRMN-KR 701

Query: 729 NSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
           + + W T++  C    C + +    A N+L EM+
Sbjct: 702 DIVSWNTMITGCIV--CGRYD---DALNLLHEMQ 730



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 25/240 (10%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D +  H  I+K GF  D ++ N L+++Y R+G +  +  +F  M  R+ VSW  +++G  
Sbjct: 655 DKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCI 714

Query: 63  HKGMSNEACKMFKEMVR------------------AGFLLNRYALGSVLRACQECGPSGF 104
             G  ++A  +  EM R                    F  N   L +VL  C      G 
Sbjct: 715 VCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALG- 773

Query: 105 KFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISV 164
             G ++H   +K     D  V + L+ MY  C    + A R+F+++  R++I+WN +I  
Sbjct: 774 -KGKEIHAYAVKQKLAMDVAVGSALVDMYAKC-GCLNLASRVFDQMPIRNVITWNVLIMA 831

Query: 165 YSQRGDTISVFKLFSRMQREG--FRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILA 220
           Y   G      +LF  M   G   R  ++PNE T+ ++  A   S  V  G +L   + A
Sbjct: 832 YGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKA 891



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 74/155 (47%), Gaps = 2/155 (1%)

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
           ERR    W  ++    H+     A++    M+      D+F F  VL A A+V  L  G 
Sbjct: 291 ERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGK 350

Query: 582 EVHACGVR--ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           ++HA   +        V + ++LV+MY KCG +  A + FD +P R+  SWNSMI+   R
Sbjct: 351 QIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCR 410

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
               + +L LF  M  +   P   T V V  ACSH
Sbjct: 411 FEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSH 445


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 295/788 (37%), Positives = 448/788 (56%), Gaps = 68/788 (8%)

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
           ++  D++ WN  IS + + G   S   +F+ M R   R S+  N    G L  + ++   
Sbjct: 44  VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPR---RSSVSYNAMISGYLRNSKFN--- 97

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
               L + +   + +     DL+  + +++G+ R      AR++F+ M +K+VVS N L+
Sbjct: 98  ----LARNLFDQMPE----RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLL 149

Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
            G                             YA+ G +D++R VF  M  K+S+SWN ++
Sbjct: 150 SG-----------------------------YAQNGYVDEAREVFDNMPEKNSISWNGLL 180

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
           +    NG  EEA + F +        S++ LIS   +C   G++   +      L   + 
Sbjct: 181 AAYVHNGRIEEACLLFES-------KSDWDLISW--NCLMGGFVRKKKLGDARWLFDKMP 231

Query: 390 SDVSVS-NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
              ++S N ++S YA  G LS+  ++F   P  D  +W +++  +  +  ++ EA  ++ 
Sbjct: 232 VRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQN-GMLDEAKTFFD 290

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
           +M       N V++  ++A         +  ++   +   N+++     N +++ YG+ G
Sbjct: 291 EMPEK----NEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSW----NTMITGYGQIG 342

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
           ++    K F  M +R D VSW ++I+GY  +    +A+N+   + Q G+ L+  TF   L
Sbjct: 343 DIAQARKFFDMMPQR-DCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCAL 401

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
           S CA +A LE G ++H   V+        +G+AL+ MY KCG ID A+  F+ +  ++V 
Sbjct: 402 STCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVV 461

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           SWN+M++GYARHG G +ALT+F  MK  G  PD +T VGVLSACSH GL+D G ++F SM
Sbjct: 462 SWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSM 521

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRK 747
           ++ YG+IP  + ++CM+DLLGRAG L++ ++ I  MP  P +  W  +LGA     N   
Sbjct: 522 TKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGN--- 578

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
           TELG KAA M+F+MEPQN+  YVLL+N+YA+ G+W D  K R  M++  V+K  G SWV 
Sbjct: 579 TELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVE 638

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
           +++ +H F  GD SHPEK+ IY  L+EL+ KMR+ GYV  TK  L D+E E KE ++ YH
Sbjct: 639 VQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYH 698

Query: 868 SEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SEK+AVAF +LT     PIR+MKNLRVC DCHSA K ISKIVGR I+LRDS+RFHHFN+G
Sbjct: 699 SEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEG 758

Query: 927 KCSCGDYW 934
            CSCGDYW
Sbjct: 759 FCSCGDYW 766



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 145/540 (26%), Positives = 251/540 (46%), Gaps = 63/540 (11%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+F  N ++  YVR   L  A +LFD MP+++ VSW  ++SGY   G  +EA ++F  M 
Sbjct: 110 DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP 169

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
                 N  +   +L A    G       ++  CL+ +S   +D +  N L+  +    +
Sbjct: 170 EK----NSISWNGLLAAYVHNGR------IEEACLLFESKSDWDLISWNCLMGGFVRKKK 219

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             D AR +F+++  RD ISWN++IS Y+Q G      +LF             P      
Sbjct: 220 LGD-ARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDE----------SPTR---- 264

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
                                          D++  +A+VSG+ + G    A+  F++M 
Sbjct: 265 -------------------------------DVFTWTAMVSGYVQNGMLDEAKTFFDEMP 293

Query: 259 QKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
           +KN VS N ++ G  + K  ++   L  S     ++  N ++  Y + G I  +R  F  
Sbjct: 294 EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDM 353

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M  +D VSW  +I+G  Q+G YEEA+  F  +++DG   +  +    LS+CA +  + LG
Sbjct: 354 MPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELG 413

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +QIHG+ +K+G  +   V NALL++Y   G +      F  + E D VSWN+++  +A  
Sbjct: 414 KQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYA-R 472

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETT 495
                +A+  +  M+ AG  P+ +T + +L+A S   +   G +    + K Y V   + 
Sbjct: 473 HGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSK 532

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI-SGYIH--NELLPKAMNLVWFM 552
               ++   G+ G +++ + +   M  +    SW +++ +  IH   EL  KA  +V+ M
Sbjct: 533 HYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKM 592



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 136/294 (46%), Gaps = 16/294 (5%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           NT+I  Y ++GD+A A K FD MP R+ VSWA I++GY   G   EA  MF E+ + G  
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGES 391

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           LNR   G  L  C +   +  + G Q+H   +K        V N L+AMY  C  S D A
Sbjct: 392 LNRATFGCALSTCADI--AALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKC-GSIDEA 448

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF-GSLIT 202
              FE IE +D++SWN++++ Y++ G       +F  M+  G    +KP+E T  G L  
Sbjct: 449 NDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAG----VKPDEITMVGVLSA 504

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKN 261
            +++ +L      +   +M K  G++      + ++    R G    A+ +   M  Q  
Sbjct: 505 CSHTGLLDRG--TEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPG 562

Query: 262 VVSMNGLMEGRR-KGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDS 310
             S   L+   R  G    G      +F M    +G    L N+YA  G   D+
Sbjct: 563 AASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDA 616



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 91/264 (34%), Positives = 131/264 (49%), Gaps = 62/264 (23%)

Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
           + GL+D G ++F  M++ Y + P  + ++CM+DLLGR   +D++EE              
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGR---VDRLEE-------------- 818

Query: 734 RTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAM 792
             +LGA     N   TELG KAA M F+M PQN+                  ++K    M
Sbjct: 819 GALLGASRIHGN---TELGEKAAQMFFKMGPQNS-----------------GISK----M 854

Query: 793 KEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFAL 852
           ++  V+K  G SW  +++ +H F  G     E++ I   L+EL+ KMR+     +     
Sbjct: 855 RDVGVQKVPGYSWFEVQNKIHTFSVGLFLSRERENI-GFLEELDLKMREREEEKERT--- 910

Query: 853 FDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKN-LRVCGDCHSAFKFISKIVGR 910
                      + Y SE +A A  +LT     P R+MK  + VC DC SA K +SKIVGR
Sbjct: 911 -----------LKYLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGR 959

Query: 911 EIVLRDSNRFHHFNDGKCSCGDYW 934
            I LRDS   H FN+  CSCG+YW
Sbjct: 960 LITLRDS---HRFNESICSCGEYW 980



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 49/97 (50%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H Q +K G+    F+ N L+ +Y + G +  A+  F+ + +++ VSW  +++GY  
Sbjct: 413 GKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYAR 472

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G   +A  +F+ M  AG   +   +  VL AC   G
Sbjct: 473 HGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTG 509


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 295/788 (37%), Positives = 448/788 (56%), Gaps = 68/788 (8%)

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
           ++  D++ WN  IS + + G   S   +F+ M R   R S+  N    G L  + ++   
Sbjct: 44  VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPR---RSSVSYNAMISGYLRNSKFN--- 97

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
               L + +   + +     DL+  + +++G+ R      AR++F+ M +K+VVS N L+
Sbjct: 98  ----LARNLFDQMPE----RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLL 149

Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
            G                             YA+ G +D++R VF  M  K+S+SWN ++
Sbjct: 150 SG-----------------------------YAQNGYVDEAREVFDNMPEKNSISWNGLL 180

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
           +    NG  EEA + F +        S++ LIS   +C   G++   +      L   + 
Sbjct: 181 AAYVHNGRIEEACLLFES-------KSDWDLISW--NCLMGGFVRKKKLGDARWLFDKMP 231

Query: 390 SDVSVS-NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
              ++S N ++S YA  G LS+  ++F   P  D  +W +++  +  +  ++ EA  ++ 
Sbjct: 232 VRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQN-GMLDEAKTFFD 290

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
           +M       N V++  ++A         +  ++   +   N+++     N +++ YG+ G
Sbjct: 291 EMPEK----NEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSW----NTMITGYGQIG 342

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
           ++    K F  M +R D VSW ++I+GY  +    +A+N+   + Q G+ L+  TF   L
Sbjct: 343 DIAQARKFFDMMPQR-DCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCAL 401

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
           S CA +A LE G ++H   V+        +G+AL+ MY KCG ID A+  F+ +  ++V 
Sbjct: 402 STCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVV 461

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           SWN+M++GYARHG G +ALT+F  MK  G  PD +T VGVLSACSH GL+D G ++F SM
Sbjct: 462 SWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSM 521

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRK 747
           ++ YG+IP  + ++CM+DLLGRAG L++ ++ I  MP  P +  W  +LGA     N   
Sbjct: 522 TKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGN--- 578

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
           TELG KAA M+F+MEPQN+  YVLL+N+YA+ G+W D  K R  M++  V+K  G SWV 
Sbjct: 579 TELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVE 638

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
           +++ +H F  GD SHPEK+ IY  L+EL+ KMR+ GYV  TK  L D+E E KE ++ YH
Sbjct: 639 VQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYH 698

Query: 868 SEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SEK+AVAF +LT     PIR+MKNLRVC DCHSA K ISKIVGR I+LRDS+RFHHFN+G
Sbjct: 699 SEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEG 758

Query: 927 KCSCGDYW 934
            CSCGDYW
Sbjct: 759 FCSCGDYW 766



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 145/540 (26%), Positives = 251/540 (46%), Gaps = 63/540 (11%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+F  N ++  YVR   L  A +LFD MP+++ VSW  ++SGY   G  +EA ++F  M 
Sbjct: 110 DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP 169

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
                 N  +   +L A    G       ++  CL+ +S   +D +  N L+  +    +
Sbjct: 170 EK----NSISWNGLLAAYVHNGR------IEEACLLFESKSDWDLISWNCLMGGFVRKKK 219

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             D AR +F+++  RD ISWN++IS Y+Q G      +LF             P      
Sbjct: 220 LGD-ARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDE----------SPTR---- 264

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
                                          D++  +A+VSG+ + G    A+  F++M 
Sbjct: 265 -------------------------------DVFTWTAMVSGYVQNGMLDEAKTFFDEMP 293

Query: 259 QKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
           +KN VS N ++ G  + K  ++   L  S     ++  N ++  Y + G I  +R  F  
Sbjct: 294 EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDM 353

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M  +D VSW  +I+G  Q+G YEEA+  F  +++DG   +  +    LS+CA +  + LG
Sbjct: 354 MPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELG 413

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +QIHG+ +K+G  +   V NALL++Y   G +      F  + E D VSWN+++  +A  
Sbjct: 414 KQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYA-R 472

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETT 495
                +A+  +  M+ AG  P+ +T + +L+A S   +   G +    + K Y V   + 
Sbjct: 473 HGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSK 532

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI-SGYIH--NELLPKAMNLVWFM 552
               ++   G+ G +++ + +   M  +    SW +++ +  IH   EL  KA  +V+ M
Sbjct: 533 HYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKM 592



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 136/294 (46%), Gaps = 16/294 (5%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           NT+I  Y ++GD+A A K FD MP R+ VSWA I++GY   G   EA  MF E+ + G  
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGES 391

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           LNR   G  L  C +   +  + G Q+H   +K        V N L+AMY  C  S D A
Sbjct: 392 LNRATFGCALSTCADI--AALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKC-GSIDEA 448

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF-GSLIT 202
              FE IE +D++SWN++++ Y++ G       +F  M+  G    +KP+E T  G L  
Sbjct: 449 NDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAG----VKPDEITMVGVLSA 504

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKN 261
            +++ +L      +   +M K  G++      + ++    R G    A+ +   M  Q  
Sbjct: 505 CSHTGLLDRG--TEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPG 562

Query: 262 VVSMNGLMEGRR-KGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDS 310
             S   L+   R  G    G      +F M    +G    L N+YA  G   D+
Sbjct: 563 AASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDA 616



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 11/173 (6%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H Q +K G+    F+ N L+ +Y + G +  A+  F+ + +++ VSW  +++GY  
Sbjct: 413 GKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYAR 472

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG----PSGFKFGMQVHCLVLKSNQ 119
            G   +A  +F+ M  AG   +   +  VL AC   G     + + + M     V+ +++
Sbjct: 473 HGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSK 532

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRI-FEEIETRDLISWNSIISVYSQRGDT 171
            +  ++   L+   G   E+ D  R + F+        SW +++      G+T
Sbjct: 533 HYTCMID--LLGRAGRLEEAQDLIRNMPFQP----GAASWGALLGASRIHGNT 579


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 288/759 (37%), Positives = 440/759 (57%), Gaps = 51/759 (6%)

Query: 220 AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----- 274
           A++  AG +  +++ + LV+ +A LG+   +R  F+Q+ QK+V + N ++          
Sbjct: 140 ALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFH 199

Query: 275 ----------------------------------GKEVHGYLIRSGLFDMVAVGNGLVNM 300
                                             G+++H +  + G    V V   L++M
Sbjct: 200 EAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHM 259

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           Y++ G    +RS+F  M  +D  SWN MISGL QNG   +A+     MR +G+  +  ++
Sbjct: 260 YSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTV 319

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           +S L  C  LG I     IH   +K GL+ D+ VSNAL+++YA  G L    K F  M  
Sbjct: 320 VSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFI 379

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            D VSWNS+I A+  ++  V+ A  +++ M+  G+ P+ +T +++ +  +     K    
Sbjct: 380 TDVVSWNSIIAAYEQNDDPVT-AHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRS 438

Query: 481 VHAQVIKYN-VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           VH  +++   +  +  I NA++  Y K G +D   K+F  +   +D +SWN++I+GY  N
Sbjct: 439 VHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVF-EIIPVKDVISWNTLITGYAQN 497

Query: 540 ELLPKAMNLVWFMMQRGQRL--DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
            L  +A+  V+ MM+  + +  +  T+ ++L A A V  L++GM++H   ++  L  DV 
Sbjct: 498 GLASEAIE-VYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVF 556

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           + + L+D+Y KCGR+  A   F  +P  +  +WN++IS +  HGH +K L LF +M  +G
Sbjct: 557 VATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEG 616

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
             PDHVTFV +LSACSH+G V+EG   F+ M Q YG+ P L+ + CMVDLLGRAG L+  
Sbjct: 617 VKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMA 675

Query: 718 EEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMY 776
            +FI  MP+ P++ IW  +LGAC    N    ELG+ A++ LFE++ +N   YVLL+N+Y
Sbjct: 676 YDFIKDMPLQPDASIWGALLGACRIHGN---IELGKFASDRLFEVDSKNVGYYVLLSNIY 732

Query: 777 ASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELN 836
           A+ GKWE V K R   +E  +KK  G S + +   V VF  G++SHP+   IYE+L+ L 
Sbjct: 733 ANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLT 792

Query: 837 QKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCG 895
            KM+  GY+P   F L D+E + KE +++ HSE++A+AF +++   K PIRI KNLRVCG
Sbjct: 793 AKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCG 852

Query: 896 DCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           DCH+A KFIS+I  REIV+RDSNRFHHF DG CSCGDYW
Sbjct: 853 DCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/578 (26%), Positives = 266/578 (46%), Gaps = 65/578 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  ++  G    +F+   L+N+Y  +GD++ +   FD++P ++  +W  ++S Y H
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194

Query: 64  KGMSNEACKMFKEM-----VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
            G  +EA   F ++     +R  F    Y    VL+AC          G ++HC   K  
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDF----YTFPPVLKAC-----GTLVDGRKIHCWAFKLG 245

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
             ++  V+  LI MY S    T  AR +F+++  RD+ SWN++IS   Q G+      + 
Sbjct: 246 FQWNVFVAASLIHMY-SRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 304

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
             M+ EG    +K N  T  S++          + +L  I   V K GL  DL+V +AL+
Sbjct: 305 DEMRLEG----IKMNFVTVVSILPVCPQLGDISTAML--IHLYVIKHGLEFDLFVSNALI 358

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR-------------------------- 272
           + +A+ GN   ARK F+QM   +VVS N ++                             
Sbjct: 359 NMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLL 418

Query: 273 ---------------RKGKEVHGYLIRSG-LFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                          +  + VHG+++R G L + V +GN +V+MYAK G +D +  VF  
Sbjct: 419 TLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEI 478

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR-DGLMSSNFSLISTLSSCASLGWIML 375
           +  KD +SWNT+I+G  QNG   EAI  +  M     ++ +  + +S L + A +G +  
Sbjct: 479 IPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQ 538

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G +IHG  +K  L  DV V+  L+ +Y   G L   + +F+ +P+   V+WN++I     
Sbjct: 539 GMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHG- 597

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
                 + +K + +M   G  P+ VTF+++L+A S     + G      + +Y +     
Sbjct: 598 IHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLK 657

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
               ++   G+ G ++        M  + D   W +++
Sbjct: 658 HYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALL 695



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 223/474 (47%), Gaps = 53/474 (11%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D +  H    K GF ++VF+  +LI++Y R G    A  LFD+MP R+  SW  ++SG  
Sbjct: 233 DGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLI 292

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G + +A  +  EM   G  +N   + S+L  C + G       M +H  V+K    FD
Sbjct: 293 QNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLG--DISTAMLIHLYVIKHGLEFD 350

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             VSN LI MY       D AR+ F+++   D++SWNSII+ Y Q  D ++    F +MQ
Sbjct: 351 LFVSNALINMYAKFGNLED-ARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQ 409

Query: 183 REGFRYSLKPNEYTFGSLIT-AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             GF    +P+  T  SL +  A S     S  +   +  +++  L+ D+ +G+A+V  +
Sbjct: 410 LNGF----QPDLLTLVSLASIVAQSRDCKNSRSVHGFI--MRRGWLMEDVVIGNAVVDMY 463

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------------------------- 272
           A+LG    A K+FE +  K+V+S N L+ G                              
Sbjct: 464 AKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTW 523

Query: 273 -------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                        ++G ++HG +I++ L   V V   L+++Y KCG + D+ S+F  +  
Sbjct: 524 VSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ 583

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           + SV+WN +IS    +G  E+ +  F  M  +G+   + + +S LS+C+  G++  G+  
Sbjct: 584 ESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWC 643

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                + G+   +     ++ L   AGYL         MP + D   W +++GA
Sbjct: 644 FRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGA 697



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 133/261 (50%), Gaps = 9/261 (3%)

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +HA ++         I   L++ Y   G++      F ++ ++ D  +WNSMIS Y+HN 
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQK-DVYAWNSMISAYVHNG 196

Query: 541 LLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
              +A+   + ++   + R D +TF  VL AC    TL  G ++H    +   +++V + 
Sbjct: 197 HFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVA 253

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           ++L+ MYS+ G    A   FD MP R++ SWN+MISG  ++G+  +AL +  +M+L+G  
Sbjct: 254 ASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIK 313

Query: 660 PDHVTFVGVLSACSHAGLVDEG-FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
            + VT V +L  C   G +      H   +   +GL   L   + ++++  + G L+   
Sbjct: 314 MNFVTVVSILPVCPQLGDISTAMLIHLYVIK--HGLEFDLFVSNALINMYAKFGNLEDAR 371

Query: 719 EFINKMPITPNSLIWRTVLGA 739
           +   +M IT + + W +++ A
Sbjct: 372 KAFQQMFIT-DVVSWNSIIAA 391


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 299/862 (34%), Positives = 469/862 (54%), Gaps = 74/862 (8%)

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
           E   CA+++F+    RD+ISW+++I+ YS+ G+    F LF +M  EG    L+PN ++ 
Sbjct: 69  ERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEG----LQPNGFSL 124

Query: 198 GSL------------------------------ITAAYSSVLSGSYLLQQILAMVKKAGL 227
            SL                              I AA+ ++ S   +L+    +  +  L
Sbjct: 125 ASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSL 184

Query: 228 LS-DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM----------EGRRK-G 275
           L+ D+ + +++++ +   G +    ++F +M+   VV+   L            G  K G
Sbjct: 185 LALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYG 244

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
             VHG +I++GL +   + N LV  Y KCG +  +  +F  +  KD VSWN MI+  +Q 
Sbjct: 245 AMVHGRIIKAGL-EATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQR 303

Query: 336 GCYEEAIMNFCAMRR--DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           G  E A+  F  M +    +  +  + +S LS+ + L  +  G++IH    +L L+ D S
Sbjct: 304 GEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTS 363

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           ++N+L++ Y+    + +  ++F  +   D +SWNS++  +  +E         +  M  +
Sbjct: 364 ITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQ-QGRCFDIFKRMMLS 422

Query: 454 GWSPNGVTFINILAAASSFSMG----KLGHQVHAQVIKYNVAN--ETTIENALLSCYGKC 507
           G  P+  +   I  AAS  S G    + G ++H  +++         ++ NA+L  Y K 
Sbjct: 423 GIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKF 482

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
             + D EKIF  M + RD  SWN+M+ GY  N      + +   ++++G  LDH + + +
Sbjct: 483 NRIADAEKIFKGM-KNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSIL 541

Query: 568 LSACASVATLERGMEVHACGVRA-----CLEFDVV--IGSALVDMYSKCGRIDYASRFFD 620
           L++C  + +L+ G + HA   +      C   D +  I +AL+ MYSKCG I  A++ F 
Sbjct: 542 LTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFL 601

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
            M  ++V+SW +MI+G A HG   +AL LF +MK DG  P+ VTF+ +L AC+H GLV E
Sbjct: 602 KMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQE 661

Query: 681 GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK-----MPITPNSL-IWR 734
           G  +F SM   YGL P +E ++CM+DL GR+G+ D+ +  +        P   + L +W+
Sbjct: 662 GSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWK 721

Query: 735 TVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKE 794
            +LGAC  +  ++ +LG +AA  + E+EP++   Y+LLAN+YAS G WED  K RKAM++
Sbjct: 722 VLLGACHAS--KQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRD 779

Query: 795 AEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFD 854
             ++KE GCSW+   +  HVFVAGD  HP++  IYEKL +LN   R  GYVP T+  L D
Sbjct: 780 KGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRMGYVPMTELVLHD 839

Query: 855 LEPESKEDLVSYHSEKIAVAFVLTR--NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREI 912
           ++   KE ++  HSEK+AV+F L         IR+MKNLRVC DCHS  KF S +  REI
Sbjct: 840 VDETEKEAILGCHSEKLAVSFGLLNCGVGNGVIRVMKNLRVCEDCHSWMKFASLLEKREI 899

Query: 913 VLRDSNRFHHFNDGKCSCGDYW 934
           +LRDS RFH F DG CSCGDYW
Sbjct: 900 LLRDSQRFHLFRDGSCSCGDYW 921



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 25/244 (10%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N ++ +Y +   +A A K+F  M +R+S SW  ++ GY+      +   +F ++++ GF 
Sbjct: 473 NAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFP 532

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL----------VSNVLIAMY 133
           L+  +L  +L +C        + G Q H +V K    F+G           ++N LI+MY
Sbjct: 533 LDHVSLSILLTSCGRL--VSLQLGKQFHAVVAK---LFNGQDCPHQDSLLSINNALISMY 587

Query: 134 GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPN 193
             C    D A ++F ++E +D+ SW ++I+  +  G  +   +LF RM+ +G    +KPN
Sbjct: 588 SKCGSIKDAA-QVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDG----IKPN 642

Query: 194 EYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           + TF +L+ A      V  GSY      +M    GL   +   + ++  F R G F  A+
Sbjct: 643 QVTFLALLMACAHGGLVQEGSYYFD---SMYNDYGLSPSIEHYACMIDLFGRSGQFDRAK 699

Query: 252 KIFE 255
            + E
Sbjct: 700 SLVE 703



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 133/276 (48%), Gaps = 20/276 (7%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  I +     D  + N+LI  Y +  ++  A ++F+ +  R+ +SW  +++GY      
Sbjct: 350 HAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQ 409

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQE--CGPSGFKFGMQVHCLVLKSNQTFDGL- 124
                +FK M+ +G   + ++L  +  A      G   F+ G ++H  +L+   T  G+ 
Sbjct: 410 GRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILR-RITPGGVS 468

Query: 125 --VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             VSN ++ MY       D A +IF+ ++ RD  SWN+++  YS+      V  +F  + 
Sbjct: 469 LSVSNAILKMYAKFNRIAD-AEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDIL 527

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD-------LYVGS 235
           ++GF     P ++   S++  +   ++S   L +Q  A+V K     D       L + +
Sbjct: 528 KQGF-----PLDHVSLSILLTSCGRLVSLQ-LGKQFHAVVAKLFNGQDCPHQDSLLSINN 581

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           AL+S +++ G+   A ++F +M +K+V S   ++ G
Sbjct: 582 ALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITG 617



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AKLF+ Q   H  +  + + N LI++Y + G +  A+++F +M  ++  SW  +++G  H
Sbjct: 562 AKLFNGQDCPHQDSL-LSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAH 620

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G++ EA ++F+ M   G   N+    ++L AC   G
Sbjct: 621 HGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGG 657


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 274/684 (40%), Positives = 403/684 (58%), Gaps = 16/684 (2%)

Query: 257 MIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA---VGNGLVNMYAKCGTIDDSRSV 313
           ++ KN +S + +    R G+ VH  ++++   D      + N L+NMY+K    + +R V
Sbjct: 11  LLLKNAISASSM----RLGRVVHARIVKT--LDSPPPPFLANYLINMYSKLDHPESARLV 64

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
            R    ++ VSW ++ISGL QNG +  A++ F  MRR+G++ ++F+      + ASL   
Sbjct: 65  LRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLP 124

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
           + G+QIH   +K G   DV V  +   +Y          K+F  +PE +  +WN+ I   
Sbjct: 125 VTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISN- 183

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE 493
           + ++    EA++ +++ RR    PN +TF   L A S +    LG Q+H  V++     +
Sbjct: 184 SVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTD 243

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM 553
            ++ N L+  YGKC ++   E IF  M  + + VSW S+++ Y+ N    KA  L     
Sbjct: 244 VSVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAAYVQNHEDEKASVLYLRSR 302

Query: 554 QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID 613
           +       F  ++VLSACA +A LE G  +HA  V+AC+E  + +GSALVDMY KCG I+
Sbjct: 303 KDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIE 362

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG--PLPDHVTFVGVLSA 671
            + + FD MP +N+ + NS+I GYA  G  D AL LF +M   G  P P+++TFV +LSA
Sbjct: 363 DSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSA 422

Query: 672 CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
           CS AG V+ G K F SM   YG+ P  E +SC+VD+LGRAG +++  EFI KMPI P   
Sbjct: 423 CSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTIS 482

Query: 732 IWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKA 791
           +W  +  AC      K +LG  AA  LF+++P+++ N+VLL+N +A+ G+W +    R+ 
Sbjct: 483 VWGALQNACRMHG--KPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREE 540

Query: 792 MKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFA 851
           +K   +KK AG SW+T+K+ VH F A D SH     I   L +L  +M  AGY P  K +
Sbjct: 541 LKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLS 600

Query: 852 LFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGR 910
           L+DLE E K   VS+HSEK+A+AF +L+    +PIRI KNLR+CGDCHS FKF+S  V R
Sbjct: 601 LYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKR 660

Query: 911 EIVLRDSNRFHHFNDGKCSCGDYW 934
           EI++RD+NRFH F DG CSC DYW
Sbjct: 661 EIIVRDNNRFHRFKDGICSCKDYW 684



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 205/505 (40%), Gaps = 67/505 (13%)

Query: 21  FLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRA 80
           FL N LIN+Y ++    SA  +    P RN VSW  ++SG    G  + A   F EM R 
Sbjct: 43  FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102

Query: 81  GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST 140
           G + N +      +A           G Q+H L +K  +  D  V      MY       
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLP--VTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRD 160

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRG---DTISVFKLFSRMQREGFRYSLKPNEYTF 197
           D AR++F+EI  R+L +WN+ IS     G   + I  F  F R+          PN  TF
Sbjct: 161 D-ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGH-------PNSITF 212

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            + + A    +     L  Q+  +V ++G  +D+ V + L+  + +      +  IF +M
Sbjct: 213 CAFLNACSDWLHLN--LGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM 270

Query: 258 IQKNVVSMNGL-----------------------------------------MEGRRKGK 276
             KN VS   L                                         M G   G+
Sbjct: 271 GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGR 330

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
            +H + +++ +   + VG+ LV+MY KCG I+DS   F  M  K+ V+ N++I G    G
Sbjct: 331 SIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQG 390

Query: 337 CYEEAIMNFCAM--RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GLDSDVS 393
             + A+  F  M  R  G   +  + +S LS+C+  G +  G +I        G++    
Sbjct: 391 QVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAE 450

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGAF----ADSEALVSEAVKYYL 448
             + ++ +   AG + R  +    MP    +S W ++  A          L++    + L
Sbjct: 451 HYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKL 510

Query: 449 DMRRAGWSPNGVTFINILAAASSFS 473
           D + +G   N V   N  AAA  ++
Sbjct: 511 DPKDSG---NHVLLSNTFAAAGRWA 532



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 132/267 (49%), Gaps = 9/267 (3%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   +K G   DVF+  +  ++Y +      A KLFDE+P+RN  +W   +S     
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   EA + F E  R     N     + L AC +        GMQ+H LVL+S    D  
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW--LHLNLGMQLHGLVLRSGFDTDVS 245

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V N LI  YG C +    +  IF E+ T++ +SW S+++ Y Q  +      L+ R +++
Sbjct: 246 VCNGLIDFYGKC-KQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKD 304

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                ++ +++   S+++A     ++G  L + I A   KA +   ++VGSALV  + + 
Sbjct: 305 ----IVETSDFMISSVLSACAG--MAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKC 358

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG 271
           G    + + F++M +KN+V+ N L+ G
Sbjct: 359 GCIEDSEQAFDEMPEKNLVTRNSLIGG 385



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 144/317 (45%), Gaps = 20/317 (6%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +L+ GF  DV +CN LI+ Y +   + S+  +F EM  +N+VSW  +V+ Y     
Sbjct: 231 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 290

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             +A  ++    +     + + + SVL AC   G +G + G  +H   +K+       V 
Sbjct: 291 DEKASVLYLRSRKDIVETSDFMISSVLSAC--AGMAGLELGRSIHAHAVKACVERTIFVG 348

Query: 127 NVLIAMYGS--CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           + L+ MYG   C+E ++ A   F+E+  ++L++ NS+I  Y+ +G       LF  M   
Sbjct: 349 SALVDMYGKCGCIEDSEQA---FDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPR 405

Query: 185 GFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           G      PN  TF SL++A     +V +G  +     +M    G+       S +V    
Sbjct: 406 G--CGPTPNYMTFVSLLSACSRAGAVENGMKIFD---SMRSTYGIEPGAEHYSCIVDMLG 460

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG---- 296
           R G    A +  ++M  +  +S+ G ++   R  GK   G L    LF +    +G    
Sbjct: 461 RAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVL 520

Query: 297 LVNMYAKCGTIDDSRSV 313
           L N +A  G   ++ +V
Sbjct: 521 LSNTFAAAGRWAEANTV 537


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 305/848 (35%), Positives = 464/848 (54%), Gaps = 62/848 (7%)

Query: 134 GSCLESTDCARRIFEEIETRDL-ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKP 192
           G CL     AR   +EI  RD  +  N ++  Y++RG  + V   FS  +R G       
Sbjct: 42  GVCLRDPPGARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLV---- 97

Query: 193 NEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL-LSDLYVGSALVSGFARLGNFYYAR 251
           +  T   ++ A  S  +    L +Q+  +  K G    ++  G++LV  + + G+     
Sbjct: 98  DSATLSCVLKACRS--VPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGI 155

Query: 252 KIFEQMIQKNVVSMNGLMEG---------------RRK---------------------- 274
           ++FE M +KNVV+   L+ G               R +                      
Sbjct: 156 EVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQG 215

Query: 275 ----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
               G+ VH   ++ G    V V N L+NMYAKCG ++D++SVF +M  +D VSWNT+++
Sbjct: 216 ALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMA 275

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           GL  N C  EA+  F   R      +  +  + +  CA+L  + L +Q+H   LK G   
Sbjct: 276 GLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHL 335

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI-GAFADSEALVSEAVKYYL 448
             +V  AL   Y+  G L+  L +F +     + VSW ++I G   + +  +  AV  + 
Sbjct: 336 TGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGD--IPLAVVLFS 393

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            MR     PN  T+  +L A    S+  L  Q+HAQVIK N  +   +  ALL+ Y K G
Sbjct: 394 RMREDRVMPNEFTYSAMLKA----SLSILPPQIHAQVIKTNYQHIPFVGTALLASYSKFG 449

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
             +D   IF +M E++D V+W++M+S +        A  L   M  +G + + FT ++V+
Sbjct: 450 STEDALSIF-KMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVI 508

Query: 569 SACA-SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
            ACA   A +++G + HA  ++      + + SALV MYS+ G ID A   F+    R++
Sbjct: 509 DACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDL 568

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            SWNSMISGYA+HG+  KA+  F QM+  G   D VTF+ V+  C+H GLV EG ++F S
Sbjct: 569 VSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDS 628

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           M + + + P +E ++CMVDL  RAG+LD+    I  MP    +++WRT+LGA CR + + 
Sbjct: 629 MVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGA-CRVH-KN 686

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
            ELG+ +A+ L  +EP ++  YVLL+N+YA+ GKW++  + RK M   +VKKEAGCSW+ 
Sbjct: 687 VELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQ 746

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
           +K+ VH F+A D+SHP  D IY+KLK +  +++  GY P T F L D+  + KE ++  H
Sbjct: 747 IKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAH 806

Query: 868 SEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SE++A+AF ++      P++I+KNLRVCGDCH   K +S I  REI++RD +RFHHFN G
Sbjct: 807 SERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGG 866

Query: 927 KCSCGDYW 934
            CSCGD+W
Sbjct: 867 ACSCGDFW 874



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 187/682 (27%), Positives = 306/682 (44%), Gaps = 69/682 (10%)

Query: 35  DLASASKLFDEMPDRNSVSWAC-IVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVL 93
           D   A    DE+P R++   A  ++  Y  +GM  E    F    R G L++   L  VL
Sbjct: 47  DPPGARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVL 106

Query: 94  RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS--NVLIAMYGSCLESTDCARRIFEEIE 151
           +AC+   P     G Q+HCL +K      G VS    L+ MY  C    +    +FE + 
Sbjct: 107 KACRSV-PDRV-LGEQLHCLCVKCGHD-RGEVSAGTSLVDMYMKCGSVCE-GIEVFEGMP 162

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
            +++++W S+++  +       V  LF RM+ EG    + PN +TF S+++A  S     
Sbjct: 163 KKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEG----IWPNPFTFASVLSAVASQ--GA 216

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             L Q++ A   K G  S ++V ++L++ +A+ G    A+ +F  M  +++VS N LM G
Sbjct: 217 LDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAG 276

Query: 272 RR-----------------------------------------KGKEVHGYLIRSGLFDM 290
            +                                           +++H  +++ G    
Sbjct: 277 LQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLT 336

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIG-KDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
             V   L + Y+KCG + D+ ++F    G ++ VSW  +ISG  QNG    A++ F  MR
Sbjct: 337 GNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMR 396

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
            D +M + F+  + L +  S+    L  QIH + +K        V  ALL+ Y+  G   
Sbjct: 397 EDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTE 452

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD-MRRAGWSPNGVTFINILAA 468
             L +F ++ + D V+W++++   A  +A   E   Y  + M   G  PN  T  +++ A
Sbjct: 453 DALSIFKMIEQKDVVAWSAMLSCHA--QAGDCEGATYLFNKMAIQGIKPNEFTISSVIDA 510

Query: 469 ASSFSMG-KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
            +  S G   G Q HA  IKY   +   + +AL+S Y + G +D  + +F R ++ RD V
Sbjct: 511 CACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTD-RDLV 569

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           SWNSMISGY  +    KA+     M   G ++D  TF  V+  C     +  G +     
Sbjct: 570 SWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSM 629

Query: 588 VR-ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDK 645
           VR   +   +   + +VD+YS+ G++D        MP       W +++   A   H + 
Sbjct: 630 VRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLG--ACRVHKNV 687

Query: 646 ALTLFSQMKLDGPLP-DHVTFV 666
            L  FS  KL    P D  T+V
Sbjct: 688 ELGKFSADKLLSLEPHDSSTYV 709



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 135/557 (24%), Positives = 245/557 (43%), Gaps = 64/557 (11%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
            +L+++Y++ G +    ++F+ MP +N V+W  +++G  H  M +E   +F  M   G  
Sbjct: 139 TSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIW 198

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
            N +   SVL A    G      G +VH   +K        V N L+ MY  C    D A
Sbjct: 199 PNPFTFASVLSAVASQG--ALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVED-A 255

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           + +F  +ETRD++SWN++++        +   +LF              +  T G +  +
Sbjct: 256 KSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHE------------SRATMGKMTQS 303

Query: 204 AYSSV------LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            Y++V      L    L +Q+ + V K G      V +AL   +++ G    A  IF   
Sbjct: 304 TYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMT 363

Query: 258 I-QKNVVSMNGLMEG----------------RRKGK---------------------EVH 279
              +NVVS   ++ G                 R+ +                     ++H
Sbjct: 364 TGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIH 423

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
             +I++    +  VG  L+  Y+K G+ +D+ S+F+ +  KD V+W+ M+S   Q G  E
Sbjct: 424 AQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCE 483

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCA--SLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
            A   F  M   G+  + F++ S + +CA  S G +  G+Q H   +K      + VS+A
Sbjct: 484 GATYLFNKMAIQGIKPNEFTISSVIDACACPSAG-VDQGRQFHAISIKYRYHDAICVSSA 542

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+S+Y+  G +     VF    + D VSWNS+I  +A       +A++ +  M  +G   
Sbjct: 543 LVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQ-HGYSMKAIETFRQMEASGIQM 601

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA-LLSCYGKCGEMDDCEKI 516
           +GVTF+ ++   +   +   G Q    +++ +  N T    A ++  Y + G++D+   +
Sbjct: 602 DGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSL 661

Query: 517 FARMSERRDEVSWNSMI 533
              M      + W +++
Sbjct: 662 IRDMPFPAGAMVWRTLL 678



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 208/469 (44%), Gaps = 56/469 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q +K G    VF+CN+L+N+Y + G +  A  +F+ M  R+ VSW  +++G       
Sbjct: 224 HAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECE 283

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA ++F E       + +    +V++ C            Q+H  VLK      G V  
Sbjct: 284 LEALQLFHESRATMGKMTQSTYATVIKLCANL--KQLALARQLHSCVLKHGFHLTGNVMT 341

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L   Y  C E  D          +R+++SW +IIS   Q GD      LFSRM+ +   
Sbjct: 342 ALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRED--- 398

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             + PNE+T+ +++ A      S S L  QI A V K       +VG+AL++ +++ G+ 
Sbjct: 399 -RVMPNEFTYSAMLKA------SLSILPPQIHAQVIKTNYQHIPFVGTALLASYSKFGST 451

Query: 248 YYARKIFEQMIQKNVVSMNGLME------------------------------------- 270
             A  IF+ + QK+VV+ + ++                                      
Sbjct: 452 EDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDAC 511

Query: 271 -----GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                G  +G++ H   I+    D + V + LV+MY++ G ID ++ VF     +D VSW
Sbjct: 512 ACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSW 571

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N+MISG  Q+G   +AI  F  M   G+     + ++ +  C   G ++ GQQ     ++
Sbjct: 572 NSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVR 631

Query: 386 -LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
              ++  +     ++ LY+ AG L   + +   MP     + W +++GA
Sbjct: 632 DHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGA 680



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 163/349 (46%), Gaps = 38/349 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD-EMPDRNSVSWACIVSGYT 62
           A+  H  +LKHGF     +   L + Y + G+LA A  +F      RN VSW  I+SG  
Sbjct: 321 ARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCI 380

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G    A  +F  M     + N +   ++L+A     P       Q+H  V+K+N    
Sbjct: 381 QNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPP------QIHAQVIKTNYQHI 434

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V   L+A Y S   ST+ A  IF+ IE +D+++W++++S ++Q GD      LF++M 
Sbjct: 435 PFVGTALLASY-SKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMA 493

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            +G    +KPNE+T  S+I A  +   +G    +Q  A+  K      + V SALVS ++
Sbjct: 494 IQG----IKPNEFTISSVIDAC-ACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYS 548

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
           R GN   A+ +FE+   +++VS N ++ G  +    HGY +++                 
Sbjct: 549 RKGNIDSAQIVFERQTDRDLVSWNSMISGYAQ----HGYSMKA----------------- 587

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
               I+  R +    I  D V++  +I G   NG   E    F +M RD
Sbjct: 588 ----IETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRD 632


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 305/848 (35%), Positives = 464/848 (54%), Gaps = 62/848 (7%)

Query: 134 GSCLESTDCARRIFEEIETRDL-ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKP 192
           G CL     AR   +EI  RD  +  N ++  Y++RG    V   FS  +R G       
Sbjct: 42  GVCLRDPPGARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLV---- 97

Query: 193 NEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL-LSDLYVGSALVSGFARLGNFYYAR 251
           +  T   ++ A  S  +    L +Q+  +  K G    ++  G++LV  + + G+     
Sbjct: 98  DSATLSCVLKACRS--VPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGI 155

Query: 252 KIFEQMIQKNVVSMNGLMEG---------------RRK---------------------- 274
           ++FE M +KNVV+   L+ G               R +                      
Sbjct: 156 EVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQG 215

Query: 275 ----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
               G+ VH   ++ G    V V N L+NMYAKCG ++D++SVF +M  +D VSWNT+++
Sbjct: 216 ALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMA 275

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           GL  N C  EA+  F   R      +  +  + +  CA+L  + L +Q+H   LK G   
Sbjct: 276 GLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHL 335

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI-GAFADSEALVSEAVKYYL 448
             +V  AL   Y+  G L+  L +F +     + VSW ++I G   + +  +  AV  + 
Sbjct: 336 TGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGD--IPLAVVLFS 393

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            MR     PN  T+  +L A    S+  L  Q+HAQVIK N  +  ++  ALL+ Y K G
Sbjct: 394 RMREDRVMPNEFTYSAMLKA----SLSILPPQIHAQVIKTNYQHIPSVGTALLASYSKFG 449

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
             +D   IF +M E++D V+W++M+S +        A  L   M  +G + + FT ++V+
Sbjct: 450 STEDALSIF-KMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVI 508

Query: 569 SACA-SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
            ACA   A +++G + HA  ++      + + SALV MYS+ G ID A   F+    R++
Sbjct: 509 DACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDL 568

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            SWNSMISGYA+HG+  KA+  F QM+  G   D VTF+ V+  C+H GLV EG ++F S
Sbjct: 569 VSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDS 628

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           M + + + P +E ++CMVDL  RAG+LD+    I  MP    +++WRT+LGA CR + + 
Sbjct: 629 MVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGA-CRVH-KN 686

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
            ELG+ +A+ L  +EP ++  YVLL+N+YA+ GKW++  + RK M   +VKKEAGCSW+ 
Sbjct: 687 VELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQ 746

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
           +K+ VH F+A D+SHP  D IY+KLK +  +++  GY P T F L D+  + KE ++  H
Sbjct: 747 IKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAH 806

Query: 868 SEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SE++A+AF ++      P++I+KNLRVCGDCH   K +S I  REI++RD +RFHHFN G
Sbjct: 807 SERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGG 866

Query: 927 KCSCGDYW 934
            CSCGD+W
Sbjct: 867 ACSCGDFW 874



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 188/682 (27%), Positives = 307/682 (45%), Gaps = 69/682 (10%)

Query: 35  DLASASKLFDEMPDRNSVSWAC-IVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVL 93
           D   A    DE+P R++   A  ++  Y  +GM  E    F    R G L++   L  VL
Sbjct: 47  DPPGARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVL 106

Query: 94  RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS--NVLIAMYGSCLESTDCARRIFEEIE 151
           +AC+   P     G Q+HCL +K      G VS    L+ MY  C    +    +FE + 
Sbjct: 107 KACRSV-PDRV-LGEQLHCLCVKCGHD-RGEVSAGTSLVDMYMKCGSVCE-GIEVFEGMP 162

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
            +++++W S+++  +       V  LF RM+ EG    + PN +TF S+++A  S     
Sbjct: 163 KKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEG----IWPNPFTFASVLSAVASQ--GA 216

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             L Q++ A   K G  S ++V ++L++ +A+ G    A+ +F  M  +++VS N LM G
Sbjct: 217 LDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAG 276

Query: 272 RR-----------------------------------------KGKEVHGYLIRSGLFDM 290
            +                                           +++H  +++ G    
Sbjct: 277 LQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLT 336

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIG-KDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
             V   L + Y+KCG + D+ ++F    G ++ VSW  +ISG  QNG    A++ F  MR
Sbjct: 337 GNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMR 396

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
            D +M + F+  + L +  S+    L  QIH + +K       SV  ALL+ Y+  G   
Sbjct: 397 EDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTE 452

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD-MRRAGWSPNGVTFINILAA 468
             L +F ++ + D V+W++++   A  +A   E   Y  + M   G  PN  T  +++ A
Sbjct: 453 DALSIFKMIEQKDVVAWSAMLSCHA--QAGDCEGATYLFNKMAIQGIKPNEFTISSVIDA 510

Query: 469 ASSFSMG-KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
            +  S G   G Q HA  IKY   +   + +AL+S Y + G +D  + +F R ++ RD V
Sbjct: 511 CACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTD-RDLV 569

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           SWNSMISGY  +    KA+     M   G ++D  TF  V+  C     +  G +     
Sbjct: 570 SWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSM 629

Query: 588 VR-ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDK 645
           VR   +   +   + +VD+YS+ G++D        MP       W +++   A   H + 
Sbjct: 630 VRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLG--ACRVHKNV 687

Query: 646 ALTLFSQMKLDGPLP-DHVTFV 666
            L  FS  KL    P D  T+V
Sbjct: 688 ELGKFSADKLLSLEPHDSSTYV 709



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 135/557 (24%), Positives = 246/557 (44%), Gaps = 64/557 (11%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
            +L+++Y++ G +    ++F+ MP +N V+W  +++G  H  M +E   +F  M   G  
Sbjct: 139 TSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIW 198

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
            N +   SVL A    G      G +VH   +K        V N L+ MY  C    D A
Sbjct: 199 PNPFTFASVLSAVASQG--ALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVED-A 255

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           + +F  +ETRD++SWN++++        +   +LF              +  T G +  +
Sbjct: 256 KSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHE------------SRATMGKMTQS 303

Query: 204 AYSSV------LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            Y++V      L    L +Q+ + V K G      V +AL   +++ G    A  IF   
Sbjct: 304 TYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMT 363

Query: 258 I-QKNVVSMNGLMEG----------------RRKGK---------------------EVH 279
              +NVVS   ++ G                 R+ +                     ++H
Sbjct: 364 TGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIH 423

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
             +I++    + +VG  L+  Y+K G+ +D+ S+F+ +  KD V+W+ M+S   Q G  E
Sbjct: 424 AQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCE 483

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCA--SLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
            A   F  M   G+  + F++ S + +CA  S G +  G+Q H   +K      + VS+A
Sbjct: 484 GATYLFNKMAIQGIKPNEFTISSVIDACACPSAG-VDQGRQFHAISIKYRYHDAICVSSA 542

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+S+Y+  G +     VF    + D VSWNS+I  +A       +A++ +  M  +G   
Sbjct: 543 LVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQ-HGYSMKAIETFRQMEASGIQM 601

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA-LLSCYGKCGEMDDCEKI 516
           +GVTF+ ++   +   +   G Q    +++ +  N T    A ++  Y + G++D+   +
Sbjct: 602 DGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSL 661

Query: 517 FARMSERRDEVSWNSMI 533
              M      + W +++
Sbjct: 662 IRDMPFPAGAMVWRTLL 678



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 207/469 (44%), Gaps = 56/469 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q +K G    VF+CN+L+N+Y + G +  A  +F+ M  R+ VSW  +++G       
Sbjct: 224 HAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECE 283

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA ++F E       + +    +V++ C            Q+H  VLK      G V  
Sbjct: 284 LEALQLFHESRATMGKMTQSTYATVIKLCANL--KQLALARQLHSCVLKHGFHLTGNVMT 341

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L   Y  C E  D          +R+++SW +IIS   Q GD      LFSRM+ +   
Sbjct: 342 ALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRED--- 398

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             + PNE+T+ +++ A      S S L  QI A V K        VG+AL++ +++ G+ 
Sbjct: 399 -RVMPNEFTYSAMLKA------SLSILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGST 451

Query: 248 YYARKIFEQMIQKNVVSMNGLME------------------------------------- 270
             A  IF+ + QK+VV+ + ++                                      
Sbjct: 452 EDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDAC 511

Query: 271 -----GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                G  +G++ H   I+    D + V + LV+MY++ G ID ++ VF     +D VSW
Sbjct: 512 ACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSW 571

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N+MISG  Q+G   +AI  F  M   G+     + ++ +  C   G ++ GQQ     ++
Sbjct: 572 NSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVR 631

Query: 386 -LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
              ++  +     ++ LY+ AG L   + +   MP     + W +++GA
Sbjct: 632 DHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGA 680



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 163/349 (46%), Gaps = 38/349 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD-EMPDRNSVSWACIVSGYT 62
           A+  H  +LKHGF     +   L + Y + G+LA A  +F      RN VSW  I+SG  
Sbjct: 321 ARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCI 380

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G    A  +F  M     + N +   ++L+A     P       Q+H  V+K+N    
Sbjct: 381 QNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPP------QIHAQVIKTNYQHI 434

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V   L+A Y S   ST+ A  IF+ IE +D+++W++++S ++Q GD      LF++M 
Sbjct: 435 PSVGTALLASY-SKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMA 493

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            +G    +KPNE+T  S+I A  +   +G    +Q  A+  K      + V SALVS ++
Sbjct: 494 IQG----IKPNEFTISSVIDAC-ACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYS 548

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
           R GN   A+ +FE+   +++VS N ++ G  +    HGY +++                 
Sbjct: 549 RKGNIDSAQIVFERQTDRDLVSWNSMISGYAQ----HGYSMKA----------------- 587

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
               I+  R +    I  D V++  +I G   NG   E    F +M RD
Sbjct: 588 ----IETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRD 632


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 303/895 (33%), Positives = 479/895 (53%), Gaps = 59/895 (6%)

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV-LIAMYGSCLESTDCAR 144
           + A+G +L+AC        + G ++H  V  S    +  V N  LI MY  C    D +R
Sbjct: 43  KEAIGLLLQACGN--QKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLD-SR 99

Query: 145 RIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA 204
            +F+ +ET++LI WN+++S Y++ G    V K+F  +  +      +P+ +TF S+I A 
Sbjct: 100 LVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSD---TDFQPDNFTFPSVIKAC 156

Query: 205 YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS 264
              +L    L + I  MV K GL+ D++VG+ALV  + + G    A K+F+ M + N+VS
Sbjct: 157 -GGILD-VRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVS 214

Query: 265 MNGLM-----------------------------------------EGRRK-GKEVHGYL 282
            N ++                                         EG    G  +HG  
Sbjct: 215 WNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLA 274

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
           ++ GL + V V N +V MY+KCG +++++  F     K+ VSWNTMIS     G   EA 
Sbjct: 275 VKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAF 334

Query: 343 MNFCAMRRDG--LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
                M+  G  + ++  ++++ L +C     +   +++HG   +      V +SNA + 
Sbjct: 335 NLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQH-VELSNAFIL 393

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
            YA  G L+   KVF  + +    SWN++IG  A +     +A+     M  +G  P+  
Sbjct: 394 AYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQN-GDPRKALHLLFQMTYSGQQPDWF 452

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           T  ++L A +     + G ++H  V++  +  +  +  +LLS Y  CG+      +F RM
Sbjct: 453 TISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRM 512

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
            ++ + VSWN+MISGY  N L  +++ L    +  G +       +V  AC+ ++ L  G
Sbjct: 513 KDK-NLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLG 571

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
            E H   ++A    D  +G +++DMY+K G I  + + FD +  +NV SWN++I  +  H
Sbjct: 572 KEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIH 631

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
           GHG +A+ L+ +MK  G +PD  T++G+L AC HAGLV+EG K+FK M     + P+LE 
Sbjct: 632 GHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEH 691

Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
           ++C++D+L RAG LD     +N+MP   ++ IW ++L +C        E+G K A  L E
Sbjct: 692 YACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSC--RTFGALEIGEKVAKKLLE 749

Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           +EP  A NYVLL+N+YA  GKW+ V + R+ MKE  ++K+AGCSW+ +   V+ FV GD 
Sbjct: 750 LEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDS 809

Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRN 880
             P+   I    + L +++ + GY P T   L ++  E K D++  HSEK+A++F L + 
Sbjct: 810 LQPKSAEIRVIWRRLEERISEIGYKPNTSSVLHEVGEEEKIDILRGHSEKLAISFGLLKT 869

Query: 881 SK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +K   +RI KNLR+C DCH+A K ISK V REIV+RD+ RFHHF DG CSC DYW
Sbjct: 870 TKGTTLRIYKNLRICADCHNAAKLISKAVEREIVVRDNKRFHHFRDGLCSCCDYW 924



 Score =  229 bits (584), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 210/812 (25%), Positives = 361/812 (44%), Gaps = 100/812 (12%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D  L   LI +Y   G    +  +FD M  +N + W  +VSGYT  G+  +  K+F ++V
Sbjct: 78  DYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLV 137

Query: 79  R-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
               F  + +   SV++AC   G    + G  +H +V+K     D  V N L+ MYG C 
Sbjct: 138 SDTDFQPDNFTFPSVIKACG--GILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKC- 194

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
            + D A ++F+ +   +L+SWNS+I  +S+ G +   F L   M  E     L P+  T 
Sbjct: 195 GAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGE---EGLLPDVVTV 251

Query: 198 GSL--ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
            ++  + A    V  G      I  +  K GL  ++ V +A+V  +++ G    A+  F 
Sbjct: 252 VTILPVCAGEGEVDIG----MGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFV 307

Query: 256 QMIQKNVVSMNGL-----MEGR-------------------------------------- 272
           +   KNVVS N +     +EG                                       
Sbjct: 308 KNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQL 367

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R  KE+HGY  R   F  V + N  +  YAKCG ++ +  VF  +  K   SWN +I G 
Sbjct: 368 RSLKELHGYSFRH-CFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGH 426

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            QNG   +A+     M   G     F++ S L +CA L  +  G++IHG  L+ GL++D 
Sbjct: 427 AQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDF 486

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V  +LLS Y   G  S    +F  M + + VSWN++I  ++ +  L  E++  +     
Sbjct: 487 FVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQN-GLPYESLALFRKSLS 545

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G   + +  +++  A S  S  +LG + H  V+K     +  +  +++  Y K G + +
Sbjct: 546 EGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKE 605

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
             K+F  + + ++  SWN++I  +  +    +A+ L   M + GQ  D FT+  +L AC 
Sbjct: 606 SRKVFDGLKD-KNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACG 664

Query: 573 SVATLERGMEVHACGVRACLEFDVVIG-----SALVDMYSKCGRIDYASRFFDLMPVR-N 626
               +E G++      +    F+++       + L+DM ++ GR+D A R  + MP   +
Sbjct: 665 HAGLVEEGLKY----FKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEAD 720

Query: 627 VYSWNSMISGYARHGH---GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD-EGF 682
              W+S++      G    G+K      +++     PD      +LS   +AGL   +G 
Sbjct: 721 NRIWSSLLRSCRTFGALEIGEKVAKKLLELE-----PDKAENYVLLSNL-YAGLGKWDGV 774

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNS----LIWRTVLG 738
           +  + M +  GL  Q +     +++ GR      +  F+    + P S    +IWR    
Sbjct: 775 RRVRQMMKEIGL--QKDAGCSWIEVGGR------VYSFVVGDSLQPKSAEIRVIWR---- 822

Query: 739 ACCRANCRKTELGRK--AANMLFEMEPQNAVN 768
              R   R +E+G K   +++L E+  +  ++
Sbjct: 823 ---RLEERISEIGYKPNTSSVLHEVGEEEKID 851



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 153/579 (26%), Positives = 269/579 (46%), Gaps = 64/579 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            ++ H  ++K G   DVF+ N L+ +Y + G +  A K+FD MP+ N VSW  ++  ++ 
Sbjct: 165 GEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSE 224

Query: 64  KGMSNEACKMFKEMV-RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            G S ++  +  EM+   G L +   + ++L  C   G      GM +H L +K   + +
Sbjct: 225 NGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVC--AGEGEVDIGMGIHGLAVKLGLSEE 282

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            +V+N ++ MY  C    + A+  F +   ++++SWN++IS +S  GD    F L   MQ
Sbjct: 283 VMVNNAMVYMYSKCGYLNE-AQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQ 341

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL-----LSDLYVGSAL 237
            +G    +K NE T  +++ A    +        Q+ ++ +  G         + + +A 
Sbjct: 342 IQG--EEMKANEVTILNVLPACLDKL--------QLRSLKELHGYSFRHCFQHVELSNAF 391

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------------------- 274
           +  +A+ G    A K+F  +  K V S N L+ G  +                       
Sbjct: 392 ILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDW 451

Query: 275 ------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                             GKE+HGY++R+GL     VG  L++ Y  CG    +R +F  
Sbjct: 452 FTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDR 511

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M  K+ VSWN MISG  QNG   E++  F     +G+ S   +++S   +C+ L  + LG
Sbjct: 512 MKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLG 571

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           ++ HG  LK     D  V  +++ +YA +G +    KVF  + + +  SWN++I A    
Sbjct: 572 KEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHG-I 630

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
                EA++ Y  M++ G  P+  T+I IL A     + + G +   ++  +N+  E  +
Sbjct: 631 HGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLI-EPKL 689

Query: 497 EN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           E+   L+    + G +DD  ++   M E  D   W+S++
Sbjct: 690 EHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLL 728



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 127/553 (22%), Positives = 241/553 (43%), Gaps = 49/553 (8%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H    +H F + V L N  I  Y + G L SA K+F  + D+   SW  ++ G+
Sbjct: 368 RSLKELHGYSFRHCFQH-VELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGH 426

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   +A  +  +M  +G   + + + S+L AC        ++G ++H  VL++    
Sbjct: 427 AQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHL--KSLQYGKEIHGYVLRNGLET 484

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V   L++ Y  C +++  AR +F+ ++ ++L+SWN++IS YSQ G       LF + 
Sbjct: 485 DFFVGTSLLSHYIHCGKASS-ARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKS 543

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             EG    ++ +E    S+  A   S LS   L ++    V KA    D +VG +++  +
Sbjct: 544 LSEG----IQSHEIAIVSVFGAC--SQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMY 597

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------RKGKEVHGYLIRSGLFDMVAVGN 295
           A+ G    +RK+F+ +  KNV S N ++         ++  E++  + + G         
Sbjct: 598 AKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYI 657

Query: 296 GLVNMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           G++      G +++    F+ M     I      +  +I  L + G  ++A+     M  
Sbjct: 658 GILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPE 717

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLS 409
           +   + N    S L SC + G + +G+++  + L+  L+ D + +  LLS LYA  G   
Sbjct: 718 E---ADNRIWSSLLRSCRTFGALEIGEKVAKKLLE--LEPDKAENYVLLSNLYAGLGKWD 772

Query: 410 RCLKVFFLMPE-----HDQVSWNSVIG---AFADSEALVSEAVKYYLDMRR-------AG 454
              +V  +M E         SW  V G   +F   ++L  ++ +  +  RR        G
Sbjct: 773 GVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIG 832

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK---CGEMD 511
           + PN  + ++ +       + +     H++ +  +     T +   L  Y     C +  
Sbjct: 833 YKPNTSSVLHEVGEEEKIDILR----GHSEKLAISFGLLKTTKGTTLRIYKNLRICADCH 888

Query: 512 DCEKIFARMSERR 524
           +  K+ ++  ER 
Sbjct: 889 NAAKLISKAVERE 901


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 304/878 (34%), Positives = 473/878 (53%), Gaps = 62/878 (7%)

Query: 107 GMQVHCLVLKSNQTFD---GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS 163
           G Q+H   + +    D   G ++  L+ MYG C    D A R+F+ +  R + SWN++I 
Sbjct: 74  GRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPD-AHRLFDGMPARTVFSWNALIG 132

Query: 164 VYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAM 221
                G       ++  M+         P+  T  S++ A  A      GS    ++  +
Sbjct: 133 ACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGS----EVHGL 188

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ-KNVVSMNGLMEG--------- 271
             K+GL     V +ALV  +A+ G    A ++FE M   ++V S N  + G         
Sbjct: 189 AVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLE 248

Query: 272 -----RR---------------------------KGKEVHGYLIRSGL-FDMVAVGNGLV 298
                RR                            G+E+H  L++ G  F++    N L+
Sbjct: 249 ALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQC--NALL 306

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
            MYA+CG +D +  VFR +  KD +SWN+M+S   QN  Y EAI  F  M ++G    + 
Sbjct: 307 VMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHA 366

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
            ++S LS+   LG ++ G+++H   +K  LDSD+ ++N L+ +Y     +    +VF  M
Sbjct: 367 CIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRM 426

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
              D VSW ++I  +A S +  SEA+  +   ++ G   + +   +IL A S      L 
Sbjct: 427 RIKDHVSWTTIIACYAQS-SRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLL 485

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
            QVH+  I+ N   +  ++N ++  YG+CGE+     IF  M +++D V+W SM++ +  
Sbjct: 486 KQVHSYAIR-NGLLDLILKNRIIDIYGECGEVCYALNIF-EMLDKKDIVTWTSMVNCFAE 543

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
           N LL +A+ L   M+  G + D      +L A A +++L +G E+H   +R     +  +
Sbjct: 544 NGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAV 603

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            S+LVDMYS CG ++YA + FD    ++V  W +MI+    HGHG +A+ +F +M   G 
Sbjct: 604 VSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGV 663

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
            PDHV+F+ +L ACSH+ LVDEG  +   M   Y L P  E ++C+VDLLGR+G+ ++  
Sbjct: 664 SPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAY 723

Query: 719 EFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYAS 778
           +FI  MP+ P S++W  +LGA CR + +  EL   A + L E+EP N  NYVL++N++A 
Sbjct: 724 KFIKSMPLEPKSVVWCALLGA-CRIH-KNHELAMIATDKLLELEPDNPGNYVLVSNVFAE 781

Query: 779 GGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQK 838
            GKW +V + R  M E  ++K+  CSW+ + + VH F A D SH +   I+ KL E+ +K
Sbjct: 782 MGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEK 841

Query: 839 MRDAG-YVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGD 896
           +R  G YV  T F L D+  E K DL+  HSE++A++F +++  S  P+RI KNLRVCGD
Sbjct: 842 LRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGD 901

Query: 897 CHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CH   K +SK+  REIV+RD+NRFHHF+ G CSCGD+W
Sbjct: 902 CHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 194/695 (27%), Positives = 322/695 (46%), Gaps = 73/695 (10%)

Query: 21  FLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR- 79
           FL   L+ +Y + G L  A +LFD MP R   SW  ++      G + EA  +++ M   
Sbjct: 94  FLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRAS 153

Query: 80  ---AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
              AG   +   L SVL+AC   G    + G +VH L +KS      LV+N L+ MY  C
Sbjct: 154 EPVAGAAPDGCTLASVLKACGAEGDG--RCGSEVHGLAVKSGLDRSTLVANALVGMYAKC 211

Query: 137 LESTDCARRIFEEI-ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
               D A R+FE + + RD+ SWNS IS   Q G  +    LF RMQ +GF      N Y
Sbjct: 212 -GLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSM----NSY 266

Query: 196 -TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
            T G L   A  + L+     +++ A + K G   ++   + LV  +AR G    A ++F
Sbjct: 267 TTVGVLQVCAELAQLNHG---RELHAALLKCGTEFNIQCNALLVM-YARCGWVDSALRVF 322

Query: 255 EQMIQKNVVSMNGLME----------------------------------------GRR- 273
            ++  K+ +S N ++                                         GR  
Sbjct: 323 REIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLI 382

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
            G+EVH Y ++  L   + + N L++MY KC +++ S  VF  M  KD VSW T+I+   
Sbjct: 383 NGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYA 442

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           Q+  Y EAI  F   +++G+      + S L +C+ L  I L +Q+H   ++ GL  D+ 
Sbjct: 443 QSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLI 501

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           + N ++ +Y + G +   L +F ++ + D V+W S++  FA++  L+ EAV  +  M  A
Sbjct: 502 LKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAEN-GLLHEAVALFGKMLNA 560

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G  P+ V  + IL A +  S    G ++H  +I+     E  + ++L+  Y  CG M+  
Sbjct: 561 GIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYA 620

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            K+F   ++ +D V W +MI+    +    +A+ +   M++ G   DH +F  +L AC+ 
Sbjct: 621 LKVFDE-AKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSH 679

Query: 574 VATLERG-----MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NV 627
              ++ G     M V    ++   E    +    VD+  + G+ + A +F   MP+    
Sbjct: 680 SKLVDEGKFYLDMMVSKYKLQPWQEHYACV----VDLLGRSGQTEEAYKFIKSMPLEPKS 735

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
             W +++   A   H +  L + +  KL    PD+
Sbjct: 736 VVWCALLG--ACRIHKNHELAMIATDKLLELEPDN 768



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 146/571 (25%), Positives = 259/571 (45%), Gaps = 59/571 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD-RNSVSWACIVSGYTHKGM 66
           H   +K G      + N L+ +Y + G L SA ++F+ M D R+  SW   +SG    GM
Sbjct: 186 HGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGM 245

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA  +F+ M   GF +N Y    VL+ C E   +    G ++H  +LK    F+ +  
Sbjct: 246 FLEALDLFRRMQSDGFSMNSYTTVGVLQVCAEL--AQLNHGRELHAALLKCGTEFN-IQC 302

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+ MY  C    D A R+F EI  +D ISWNS++S Y Q          F  M + GF
Sbjct: 303 NALLVMYARC-GWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGF 361

Query: 187 RYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                P+     SL++A      +++G    +++ A   K  L SDL + + L+  + + 
Sbjct: 362 ----NPDHACIVSLLSAVGHLGRLING----REVHAYAVKQRLDSDLQIANTLMDMYIKC 413

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLM-----------------EGRRKG------------ 275
            +   + ++F++M  K+ VS   ++                   +++G            
Sbjct: 414 YSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSIL 473

Query: 276 ------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                       K+VH Y IR+GL D++ + N ++++Y +CG +  + ++F  +  KD V
Sbjct: 474 EACSGLKSISLLKQVHSYAIRNGLLDLI-LKNRIIDIYGECGEVCYALNIFEMLDKKDIV 532

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           +W +M++   +NG   EA+  F  M   G+   + +L+  L + A L  +  G++IHG  
Sbjct: 533 TWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFL 592

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           ++     + +V ++L+ +Y+  G ++  LKVF      D V W ++I A         +A
Sbjct: 593 IRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINA-TGMHGHGKQA 651

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH-QVHAQVIKYNVANETTIENALLS 502
           +  +  M   G SP+ V+F+ +L A S   +   G   +   V KY +         ++ 
Sbjct: 652 IYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVD 711

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
             G+ G+ ++  K    M      V W +++
Sbjct: 712 LLGRSGQTEEAYKFIKSMPLEPKSVVWCALL 742



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 189/403 (46%), Gaps = 52/403 (12%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +LK G  +++  CN L+ +Y R G + SA ++F E+ D++ +SW  ++S Y    +
Sbjct: 287 LHAALLKCGTEFNI-QCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRL 345

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA   F EMV+ GF  +   + S+L A    G      G +VH   +K     D  ++
Sbjct: 346 YAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGR--LINGREVHAYAVKQRLDSDLQIA 403

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+ MY  C  S +C+ R+F+ +  +D +SW +II+ Y+Q          F   Q+EG 
Sbjct: 404 NTLMDMYIKCY-SVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEG- 461

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              +K +    GS++ A   S L    LL+Q+ +   + GLL DL + + ++  +   G 
Sbjct: 462 ---IKVDPMMMGSILEAC--SGLKSISLLKQVHSYAIRNGLL-DLILKNRIIDIYGECGE 515

Query: 247 FYYARKIFEQMIQKNVVSM---------NGLME--------------------------- 270
             YA  IFE + +K++V+          NGL+                            
Sbjct: 516 VCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGA 575

Query: 271 -----GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                   KGKE+HG+LIR       AV + LV+MY+ CG+++ +  VF     KD V W
Sbjct: 576 IAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLW 635

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
             MI+    +G  ++AI  F  M   G+   + S ++ L +C+
Sbjct: 636 TAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACS 678



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 22/92 (23%), Positives = 46/92 (50%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  +++  F  +  + ++L+++Y   G +  A K+FDE   ++ V W  +++     
Sbjct: 586 KEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMH 645

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRAC 96
           G   +A  +FK M+  G   +  +  ++L AC
Sbjct: 646 GHGKQAIYIFKRMLETGVSPDHVSFLALLYAC 677


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 277/725 (38%), Positives = 426/725 (58%), Gaps = 27/725 (3%)

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQK----NVVSMNGLMEG-------RRKGK 276
           L DL   +A+ S  +R G    A ++F + +++    N  ++    +           G 
Sbjct: 114 LRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGG 173

Query: 277 EVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
            V G + + G +   V+VG  L++M+AK G +   R VF  +  +  V W  +I+   Q+
Sbjct: 174 AVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQS 233

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G  +EA+  F  M  +G     ++L S LS+C  LG   LGQQ+H   L+LGL+SD  VS
Sbjct: 234 GYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVS 293

Query: 396 NALLSLYA---DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
             L+ +YA   +   L    +VF  MP+H+ ++W +++  +    +  ++ +  +  M  
Sbjct: 294 CGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLN 353

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G  PN +T+ ++L A ++      G Q+H   +K N+A+   + NAL+S Y + G +++
Sbjct: 354 EGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEE 413

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR-LDHFTFATVLSAC 571
               F ++ E+ + VS++  + G   +           + ++R +  +  FTF +++SA 
Sbjct: 414 ARHAFDQLYEK-NMVSFSGNLDGDGRSNTYQD------YQIERMELGISTFTFGSLISAA 466

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           ASV  L +G  +HA  ++A    D  IG++LV MYS+CG +  A + FD M   NV SW 
Sbjct: 467 ASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWT 526

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           SMISG A+HG+  +AL LF  M   G  P+ VT++ VLSACSHAGLV EG +HF+ M + 
Sbjct: 527 SMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKH 586

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
           +GLIP++E ++CMVDLLGR+G ++   +FIN+MP   ++L+W+T+LGAC   N    ++G
Sbjct: 587 HGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHN--NMDIG 644

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
             AAN + ++EPQ+   YVLL+N+YA  G W+ VA+ R  M++  + KE G SW+ + + 
Sbjct: 645 EIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNT 704

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
           +H F AGD SHP+ + IY KL+ L ++++  GYVP T   L D+  E KE  +  HSEKI
Sbjct: 705 IHEFRAGDTSHPQAEEIYTKLETLIREIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKI 764

Query: 872 AVAFVLT--RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           AVAF L    ++  PIRI KNLRVC DCHSA K++SK  GREI+LRDSNRFH   DG+CS
Sbjct: 765 AVAFGLISCTSATKPIRIFKNLRVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGECS 824

Query: 930 CGDYW 934
           CG+YW
Sbjct: 825 CGEYW 829



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 157/576 (27%), Positives = 278/576 (48%), Gaps = 70/576 (12%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVSGYTHKGMSNEACKMFKE 76
           D  + N+L+ +Y +   +A+A  +FD MP   R+ VSW  + S  +  G   EA ++F E
Sbjct: 83  DAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGE 142

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKF-GMQVHCLVLKSNQTFDGLVSNVLIAMYGS 135
            +  G L N + L +  +AC       F   G  V  LV K    F G   +V  A+   
Sbjct: 143 TLEEGLLPNAFTLCAATQAC--FASELFHLAGGAVLGLVFKLG--FWGTDVSVGCALIDM 198

Query: 136 CLESTDCA--RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPN 193
             ++ D    RR+F+ +  R ++ W  +I+ Y+Q G +    +LF  M   GF    +P+
Sbjct: 199 FAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGF----QPD 254

Query: 194 EYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN---FYYA 250
           +YT  S+++A   + L    L QQ+ ++  + GL SD  V   LV  +A+  N    + A
Sbjct: 255 QYTLSSMLSAC--TELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNA 312

Query: 251 RKIFEQMIQKNVVSMNGLMEG--------------------------------------- 271
           R++F +M + NV++   L+ G                                       
Sbjct: 313 REVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACAN 372

Query: 272 ---RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
              +  G+++H + ++S L D+  VGN LV+MYA+ G+I+++R  F  +  K+ VS++  
Sbjct: 373 LGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGN 432

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           + G  ++  Y++       + R  L  S F+  S +S+ AS+G +  GQ++H   LK G 
Sbjct: 433 LDGDGRSNTYQDY-----QIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGF 487

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
            SD ++ N+L+S+Y+  GYL    +VF  M +H+ +SW S+I   A      + A++ + 
Sbjct: 488 GSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLA-KHGYAARALELFH 546

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGK 506
           DM  AG  PN VT+I +L+A S   + K G + H ++++ +      +E+   ++   G+
Sbjct: 547 DMIAAGVKPNDVTYIAVLSACSHAGLVKEGKE-HFRMMQKHHGLIPRMEHYACMVDLLGR 605

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
            G ++D       M  + D + W +++     HN +
Sbjct: 606 SGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNM 641



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 168/635 (26%), Positives = 294/635 (46%), Gaps = 86/635 (13%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE--EIETRDLISWNSIISV 164
            +Q H L   S    D +V+N L+ +Y  C  +   AR +F+   +  RDL+SW ++ S 
Sbjct: 68  ALQGHLLRTGSLLETDAVVANSLLTLYSKC-SAVAAARSVFDGMPVGLRDLVSWTAMASC 126

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV---LSGSYLLQQILAM 221
            S+ G      +LF     EG    L PN +T  +   A ++S    L+G      +L +
Sbjct: 127 LSRNGAEAEALRLFGETLEEG----LLPNAFTLCAATQACFASELFHLAGG----AVLGL 178

Query: 222 VKKAGLL-SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSM--------------- 265
           V K G   +D+ VG AL+  FA+ G+    R++F+ + ++ VV                 
Sbjct: 179 VFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDE 238

Query: 266 ----------NGLMEGR----------------RKGKEVHGYLIRSGLFDMVAVGNGLVN 299
                     NG    +                R G+++H   +R GL     V  GLV+
Sbjct: 239 AVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVD 298

Query: 300 MYAKC---GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN-FCAMRRDGLMS 355
           MYAK     ++ ++R VF  M   + ++W  ++SG  Q G  +  +M  FC M  +G+  
Sbjct: 299 MYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRP 358

Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
           ++ +  S L +CA+LG    G+QIH   +K  L     V NAL+S+YA++G +      F
Sbjct: 359 NHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAF 418

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
             + E + VS++  +    D +   +    Y ++    G S    TF ++++AA+S  M 
Sbjct: 419 DQLYEKNMVSFSGNL----DGDGRSNTYQDYQIERMELGIST--FTFGSLISAAASVGML 472

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             G ++HA  +K    ++  I N+L+S Y +CG + D  ++F  M++  + +SW SMISG
Sbjct: 473 TKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMND-HNVISWTSMISG 531

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG------MEVHACGVR 589
              +    +A+ L   M+  G + +  T+  VLSAC+    ++ G      M+ H  G+ 
Sbjct: 532 LAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHH-GLI 590

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGH---GDK 645
             +E      + +VD+  + G ++ A  F + MP + +   W +++     H +   G+ 
Sbjct: 591 PRMEH----YACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEI 646

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
           A     Q++   P P    +V + +  + AGL D+
Sbjct: 647 AANHVIQLEPQDPAP----YVLLSNLYAEAGLWDQ 677



 Score =  188 bits (477), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 235/479 (49%), Gaps = 59/479 (12%)

Query: 4   AKLFHLQ-------ILKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWA 55
           ++LFHL        + K GF   DV +   LI+++ + GDL +  ++FD + +R  V W 
Sbjct: 165 SELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWT 224

Query: 56  CIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVL 115
            +++ Y   G S+EA ++F +M+  GF  ++Y L S+L AC E G   F+ G Q+H L L
Sbjct: 225 LLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELG--SFRLGQQLHSLAL 282

Query: 116 KSNQTFDGLVSNVLIAMYGSCL--ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTIS 173
           +     D  VS  L+ MY      +S   AR +F  +   ++++W +++S Y QRG   +
Sbjct: 283 RLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDN 342

Query: 174 -VFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLY 232
            V  LF +M  EG R    PN  T+ S++ A  +  L      +QI     K+ L     
Sbjct: 343 QVMILFCKMLNEGIR----PNHITYSSMLKACAN--LGDQDSGRQIHTHCVKSNLADLNV 396

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR-------------------- 272
           VG+ALVS +A  G+   AR  F+Q+ +KN+VS +G ++G                     
Sbjct: 397 VGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERMELGIST 456

Query: 273 ----------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                            KG+ +H   +++G     A+GN LV+MY++CG + D+  VF  
Sbjct: 457 FTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDE 516

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M   + +SW +MISGL ++G    A+  F  M   G+  ++ + I+ LS+C+  G +  G
Sbjct: 517 MNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEG 576

Query: 377 QQIHGEGLKL--GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           ++ H   ++   GL   +     ++ L   +G +   L     MP + D + W +++GA
Sbjct: 577 KE-HFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGA 634



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 2/98 (2%)

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV--RNVYSWNSMI 634
           L R ++ H     + LE D V+ ++L+ +YSKC  +  A   FD MPV  R++ SW +M 
Sbjct: 65  LGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMA 124

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
           S  +R+G   +AL LF +   +G LP+  T      AC
Sbjct: 125 SCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQAC 162


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 288/759 (37%), Positives = 437/759 (57%), Gaps = 51/759 (6%)

Query: 220 AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----- 274
           A++  AG +  +++ + LV+ +A LG+   +R  F+Q+ QK+V + N ++          
Sbjct: 140 ALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFH 199

Query: 275 ----------------------------------GKEVHGYLIRSGLFDMVAVGNGLVNM 300
                                             G+ +H +  + G    V V   L++M
Sbjct: 200 EAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHM 259

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           Y++ G    +RS+F  M  +D  SWN MISGL QNG   +A+     MR +G+  +  ++
Sbjct: 260 YSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTV 319

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           +S L  C  LG I     IH   +K GL+ D+ VSNAL+++YA  G L    K F  M  
Sbjct: 320 VSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFI 379

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            D VSWNS+I A+  ++  V+ A  +++ M+  G+ P+ +T +++ +  +     K    
Sbjct: 380 TDVVSWNSIIAAYEQNDDPVT-AHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRS 438

Query: 481 VHAQVIKYN-VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           VH  +++   +  +  I NA++  Y K G +D   K+F  +   +D +SWN++I+GY  N
Sbjct: 439 VHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVF-EIILVKDVISWNTLITGYAQN 497

Query: 540 ELLPKAMNLVWFMMQRGQRL--DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
            L  +A+  V+ MM+  + +  +  T+ ++L A A V  L++GM +H   ++  L  DV 
Sbjct: 498 GLASEAIE-VYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVF 556

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           + + L+D+Y KCGR+  A   F  +P  +  +WN++IS +  HGH +K L LF +M  +G
Sbjct: 557 VATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEG 616

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
             PDHVTFV +LSACSH+G V+EG   F+ M Q YG+ P L+ + CMVDLLGRAG L+  
Sbjct: 617 VKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMA 675

Query: 718 EEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMY 776
             FI  MP+ P++ IW  +LGAC    N    ELG+ A++ LFE++ +N   YVLL+N+Y
Sbjct: 676 YGFIKDMPLQPDASIWGALLGACRIHGN---IELGKFASDRLFEVDSKNVGYYVLLSNIY 732

Query: 777 ASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELN 836
           A+ GKWE V K R   +E  +KK  G S + +   V VF  G++SHP+   IYE+L+ L 
Sbjct: 733 ANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLT 792

Query: 837 QKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCG 895
            KM+  GY+P   F L D+E + KE +++ HSE++A+AF +++   K PIRI KNLRVCG
Sbjct: 793 AKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCG 852

Query: 896 DCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           DCH+A KFIS+I  REIV+RDSNRFHHF DG CSCGDYW
Sbjct: 853 DCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 155/578 (26%), Positives = 267/578 (46%), Gaps = 65/578 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  ++  G    +F+   L+N+Y  +GD++ +   FD++P ++  +W  ++S Y H
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194

Query: 64  KGMSNEACKMFKEM-----VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
            G  +EA   F ++     +R  F    Y    VL+AC          G ++HC   K  
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDF----YTFPPVLKAC-----GTLVDGRRIHCWAFKLG 245

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
             ++  V+  LI MY S    T  AR +F+++  RD+ SWN++IS   Q G+      + 
Sbjct: 246 FQWNVFVAASLIHMY-SRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 304

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
             M+ EG    +K N  T  S++          + +L  I   V K GL  DL+V +AL+
Sbjct: 305 DEMRLEG----IKMNFVTVVSILPVCPQLGDISTAML--IHLYVIKHGLEFDLFVSNALI 358

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR-------------------------- 272
           + +A+ GN   ARK F+QM   +VVS N ++                             
Sbjct: 359 NMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLL 418

Query: 273 ---------------RKGKEVHGYLIRSG-LFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                          +  + VHG+++R G L + V +GN +V+MYAK G +D +  VF  
Sbjct: 419 TLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEI 478

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR-DGLMSSNFSLISTLSSCASLGWIML 375
           ++ KD +SWNT+I+G  QNG   EAI  +  M     ++ +  + +S L + A +G +  
Sbjct: 479 ILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQ 538

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G +IHG  +K  L  DV V+  L+ +Y   G L   + +F+ +P+   V+WN++I     
Sbjct: 539 GMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHG- 597

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
                 + +K + +M   G  P+ VTF+++L+A S     + G      + +Y +     
Sbjct: 598 IHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLK 657

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
               ++   G+ G ++        M  + D   W +++
Sbjct: 658 HYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALL 695



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 223/474 (47%), Gaps = 53/474 (11%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D +  H    K GF ++VF+  +LI++Y R G    A  LFD+MP R+  SW  ++SG  
Sbjct: 233 DGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLI 292

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G + +A  +  EM   G  +N   + S+L  C + G       M +H  V+K    FD
Sbjct: 293 QNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLG--DISTAMLIHLYVIKHGLEFD 350

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             VSN LI MY       D AR+ F+++   D++SWNSII+ Y Q  D ++    F +MQ
Sbjct: 351 LFVSNALINMYAKFGNLED-ARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQ 409

Query: 183 REGFRYSLKPNEYTFGSLIT-AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             GF    +P+  T  SL +  A S     S  +   +  +++  L+ D+ +G+A+V  +
Sbjct: 410 LNGF----QPDLLTLVSLASIVAQSRDCKNSRSVHGFI--MRRGWLMEDVVIGNAVVDMY 463

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------------------------- 272
           A+LG    A K+FE ++ K+V+S N L+ G                              
Sbjct: 464 AKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTW 523

Query: 273 -------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                        ++G  +HG +I++ L   V V   L+++Y KCG + D+ S+F  +  
Sbjct: 524 VSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ 583

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           + SV+WN +IS    +G  E+ +  F  M  +G+   + + +S LS+C+  G++  G+  
Sbjct: 584 ESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWC 643

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                + G+   +     ++ L   AGYL         MP + D   W +++GA
Sbjct: 644 FRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGA 697



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 132/261 (50%), Gaps = 9/261 (3%)

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +HA ++         I   L++ Y   G++      F ++ ++ D  +WNSMIS Y+HN 
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQK-DVYTWNSMISAYVHNG 196

Query: 541 LLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
              +A+   + ++   + R D +TF  VL AC    TL  G  +H    +   +++V + 
Sbjct: 197 HFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVFVA 253

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           ++L+ MYS+ G    A   FD MP R++ SWN+MISG  ++G+  +AL +  +M+L+G  
Sbjct: 254 ASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIK 313

Query: 660 PDHVTFVGVLSACSHAGLVDEG-FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
            + VT V +L  C   G +      H   +   +GL   L   + ++++  + G L+   
Sbjct: 314 MNFVTVVSILPVCPQLGDISTAMLIHLYVIK--HGLEFDLFVSNALINMYAKFGNLEDAR 371

Query: 719 EFINKMPITPNSLIWRTVLGA 739
           +   +M IT + + W +++ A
Sbjct: 372 KAFQQMFIT-DVVSWNSIIAA 391


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 311/937 (33%), Positives = 485/937 (51%), Gaps = 83/937 (8%)

Query: 5   KLFHLQILKHGFAYDV-FLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           +  H +I K   ++++ FL   L+ +Y + G L  A K+FDEMPDR + +W  ++  Y  
Sbjct: 100 RQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVS 159

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G    A  ++  M   G  L   +  ++L+AC +      + G ++H L++K      G
Sbjct: 160 NGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL--RDIRSGSELHSLLVKLGYHSTG 217

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETR-DLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            + N L++MY    +    ARR+F+  + + D + WNSI+S YS  G ++   +LF  M 
Sbjct: 218 FIVNALVSMYAKN-DDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH 276

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             G      PN YT                                        +VS   
Sbjct: 277 MTG----PAPNSYT----------------------------------------IVSALT 292

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNMY 301
               F YA+                       GKE+H  +++S      + V N L+ MY
Sbjct: 293 ACDGFSYAKL----------------------GKEIHASVLKSSTHSSELYVCNALIAMY 330

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
            +CG +  +  + R M   D V+WN++I G  QN  Y+EA+  F  M   G  S   S+ 
Sbjct: 331 TRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMT 390

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S +++   L  ++ G ++H   +K G DS++ V N L+ +Y+         + F  M + 
Sbjct: 391 SIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDK 450

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D +SW +VI  +A ++  V EA++ + D+ +     + +   +IL A+S      +  ++
Sbjct: 451 DLISWTTVIAGYAQNDCHV-EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 509

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H  +++  + + T I+N L+  YGKC  M    ++F  + + +D VSW SMIS    N  
Sbjct: 510 HCHILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESI-KGKDVVSWTSMISSSALNGN 567

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA--CLEFDVVIG 599
             +A+ L   M++ G   D      +LSA AS++ L +G E+H   +R   CLE  + + 
Sbjct: 568 ESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV- 626

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
            A+VDMY+ CG +  A   FD +  + +  + SMI+ Y  HG G  A+ LF +M+ +   
Sbjct: 627 -AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVS 685

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           PDH++F+ +L ACSHAGL+DEG    K M   Y L P  E + C+VD+LGRA  + +  E
Sbjct: 686 PDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFE 745

Query: 720 FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASG 779
           F+  M   P + +W  +L A CR++  K E+G  AA  L E+EP+N  N VL++N++A  
Sbjct: 746 FVKMMKTEPTAEVWCALLAA-CRSHSEK-EIGEIAAQRLLELEPKNPGNLVLVSNVFAEQ 803

Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
           G+W DV K R  MK + ++K  GCSW+ M   VH F A D+SHPE   IYEKL E+ +K+
Sbjct: 804 GRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKL 863

Query: 840 -RDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNS-KLPIRIMKNLRVCGDC 897
            R+ GYV  TKF L +++   K  ++  HSE+IA+A+ L R   +  +RI KNLRVC DC
Sbjct: 864 EREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDC 923

Query: 898 HSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           H+  K +SK+  R+IV+RD+NRFHHF  G CSCGD W
Sbjct: 924 HTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 139/587 (23%), Positives = 251/587 (42%), Gaps = 98/587 (16%)

Query: 1   SKDAKLFHLQILKHG-FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           +K  K  H  +LK    + ++++CN LI +Y R G +  A ++  +M + + V+W  ++ 
Sbjct: 300 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 359

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           GY    M  EA + F +M+ AG   +  ++ S++ A      S    GM++H  V+K   
Sbjct: 360 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRL--SNLLAGMELHAYVIKHGW 417

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             +  V N LI MY  C   T    R F  +  +DLISW ++I+ Y+Q    +   +LF 
Sbjct: 418 DSNLQVGNTLIDMYSKC-NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF- 475

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
              R+  +  ++ +E   GS++ A  SSVL    ++++I   + + GLL D  + + LV 
Sbjct: 476 ---RDVAKKRMEIDEMILGSILRA--SSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVD 529

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--------------RR------------ 273
            + +  N  YA ++FE +  K+VVS   ++                RR            
Sbjct: 530 VYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVA 589

Query: 274 ---------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                          KG+E+H YL+R G     ++   +V+MYA CG +  +++VF  + 
Sbjct: 590 LLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE 649

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            K  + + +MI+    +GC + A+  F  MR + +   + S ++ L +C+  G +  G+ 
Sbjct: 650 RKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGR- 708

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
                                      G+L        +  E++   W        D   
Sbjct: 709 ---------------------------GFLK------IMEHEYELEPWPEHYVCLVDMLG 735

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS---MGKLGHQVHAQVIKYNVANETT 495
             +  V+ +  ++     P    +  +LAA  S S   +G++  Q   ++   N  N   
Sbjct: 736 RANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVL 795

Query: 496 IENALLSCYGKCGEMDDCEKIFARMS----ERRDEVSWNSMISGYIH 538
           + N     + + G  +D EK+ A+M     E+    SW  M  G +H
Sbjct: 796 VSNV----FAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEM-DGKVH 837


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 279/762 (36%), Positives = 432/762 (56%), Gaps = 47/762 (6%)

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR-- 272
           L Q + ++ K GL S+    + LVS F + G+ + A ++F+ +  K     + +++G   
Sbjct: 93  LHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYAR 152

Query: 273 ---------------------------------------RKGKEVHGYLIRSGLFDMVAV 293
                                                  RKGKE+H  LI +G    V  
Sbjct: 153 NSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFA 212

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
             G+VNMYAKC  ++++  +F  M  +D V WNT+ISG  QNG  + A+     M+ +G 
Sbjct: 213 MTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGK 272

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
              + +++S L + A +G + +G+ IHG  ++ G +S V+VS AL+ +Y+  G +     
Sbjct: 273 RPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARL 332

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           +F  M     VSWNS+I  +  +      A++ +  M         VT +  L A +   
Sbjct: 333 IFDRMTGKTVVSWNSMIDGYVQN-GDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLG 391

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
             + G  VH  + +  + ++ ++ N+L+S Y KC  +D   +IF  + + +  VSWN+MI
Sbjct: 392 DVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENL-QHKTLVSWNAMI 450

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
            GY  N  + +A++    M  +  + D FT  +V+ A A ++ L +   +H   +R CL+
Sbjct: 451 LGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLD 510

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
            +V + +ALVDMY+KCG +  A + FD+M  R+V +WN+MI GY  HG G  AL LF +M
Sbjct: 511 KNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKM 570

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGE 713
           K +   P+ VTF+ VLSACSH+GLV+EGF++F SM + YGL P ++ +  MVDLLGRA  
Sbjct: 571 KKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANR 630

Query: 714 LDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLA 773
           L++  +FI KMPI P   ++  +LGA CR + +  ELG KAAN +F+++P +   +VLLA
Sbjct: 631 LNEAWDFIQKMPIEPAISVFGAMLGA-CRIH-KNVELGEKAANRIFDLDPDDGGYHVLLA 688

Query: 774 NMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLK 833
           N+YA+   W+ VA+ R  M++  ++K  G S V +++ VH F +G  SHP+   IY  L+
Sbjct: 689 NIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLE 748

Query: 834 ELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLR 892
            L  +++ AGY+P T  ++ D+E   KE L++ HSEK+A+AF L   S    I + KNLR
Sbjct: 749 TLGNRIKAAGYMPDTN-SVHDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLR 807

Query: 893 VCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           VCGDCH+A K+IS +  REI++RD  RFHHF DG CSCGDYW
Sbjct: 808 VCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 212/409 (51%), Gaps = 5/409 (1%)

Query: 276 KEVHGYL---IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           KE+H ++   I++GL+        LV+++ K G++ ++  VF+ +  K    ++TM+ G 
Sbjct: 91  KELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGY 150

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            +N   ++A+  FC MR DG+    ++    L  C     +  G++IH + +  G  S+V
Sbjct: 151 ARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNV 210

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
                ++++YA    +    K+F  MPE D V WN++I  +A +      A++  L M+ 
Sbjct: 211 FAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQN-GFGKTALELVLRMQE 269

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G  P+ +T ++IL A +     ++G  +H   ++    +   +  AL+  Y KCG +  
Sbjct: 270 EGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGT 329

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
              IF RM+  +  VSWNSMI GY+ N     AM +   MM     + + T    L ACA
Sbjct: 330 ARLIFDRMTG-KTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACA 388

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
            +  +E+G  VH    +  L  DV + ++L+ MYSKC R+D A+  F+ +  + + SWN+
Sbjct: 389 DLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNA 448

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           MI GYA++G  ++A+  F +M+L    PD  T V V+ A +   ++ + 
Sbjct: 449 MILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQA 497



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 155/599 (25%), Positives = 274/599 (45%), Gaps = 65/599 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K+   F   I+K+G   +      L++++ + G L  A+++F  + D+    +  ++ GY
Sbjct: 91  KELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGY 150

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                 ++A   F  M   G     Y    +L+ C +   +  + G ++HC ++      
Sbjct: 151 ARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGD--NADLRKGKEIHCQLI-----V 203

Query: 122 DGLVSNV-----LIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
           +G  SNV     ++ MY  C    + A ++F+ +  RDL+ WN+IIS Y+Q G   +  +
Sbjct: 204 NGFASNVFAMTGVVNMYAKC-RLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALE 262

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
           L  RMQ EG R    P+  T  S++ A   + +    + + I     +AG  S + V +A
Sbjct: 263 LVLRMQEEGKR----PDSITIVSILPAV--ADVGSLRIGRSIHGYSMRAGFESFVNVSTA 316

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------ 272
           LV  +++ G+   AR IF++M  K VVS N +++G                         
Sbjct: 317 LVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMT 376

Query: 273 -----------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                             +G+ VH  L +  L   V+V N L++MY+KC  +D +  +F 
Sbjct: 377 NVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFE 436

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            +  K  VSWN MI G  QNG   EAI  FC M+   +   +F+++S + + A L  +  
Sbjct: 437 NLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQ 496

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
            + IHG  ++  LD +V V+ AL+ +YA  G +    K+F +M E    +WN++I  +  
Sbjct: 497 AKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYG- 555

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANET 494
           +  L   A++ +  M++    PN VTF+ +L+A S   + + G Q    + K Y +    
Sbjct: 556 THGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAM 615

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHN--ELLPKAMNLVW 550
               A++   G+   +++      +M        + +M+    IH   EL  KA N ++
Sbjct: 616 DHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIF 674



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 141/297 (47%), Gaps = 16/297 (5%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV + N+LI++Y +   +  A+++F+ +  +  VSW  ++ GY   G  NEA   F +M 
Sbjct: 411 DVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQ 470

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
                 + + + SV+ A  E   S       +H LV+++    +  V+  L+ MY  C  
Sbjct: 471 LQNIKPDSFTMVSVIPALAEL--SVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKC-G 527

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
           +   AR++F+ ++ R + +WN++I  Y   G   +  +LF +M++E     +KPNE TF 
Sbjct: 528 AVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKE----VIKPNEVTFL 583

Query: 199 SLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            +++A ++S ++   +  Q   +M K  GL   +    A+V    R      A    ++M
Sbjct: 584 CVLSACSHSGLVEEGF--QYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKM 641

Query: 258 IQKNVVSMNGLMEGR-RKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAKCGTID 308
             +  +S+ G M G  R  K V  G    + +FD+     G    L N+YA     D
Sbjct: 642 PIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWD 698


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 271/721 (37%), Positives = 420/721 (58%), Gaps = 19/721 (2%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG 275
           ++I ++++   +  D  +GS LV  +   G+    R+IF+++  + V   N LM G  K 
Sbjct: 121 RRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAK- 179

Query: 276 KEVHGYLIRSGLFD-MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
             +  +     LF  M  +G            ++ +R +F  +  +D +SWN+MISG   
Sbjct: 180 --IGNFRESLSLFKRMRELG---------IRRVESARKLFDELGDRDVISWNSMISGYVS 228

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG  E+ +  F  M   G+ +   +++S ++ C++ G ++LG+ +HG  +K     ++++
Sbjct: 229 NGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTL 288

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           +N LL +Y+ +G L+  ++VF  M E   VSW S+I  +A  E L   +V+ + +M + G
Sbjct: 289 NNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYA-REGLSDMSVRLFHEMEKEG 347

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
            SP+  T   IL A +   + + G  VH  + +  + ++  + NAL+  Y KCG M D  
Sbjct: 348 ISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAH 407

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
            +F+ M + +D VSWN+MI GY  N L  +A+NL +  MQ   + +  T A +L ACAS+
Sbjct: 408 SVFSEM-QVKDIVSWNTMIGGYSKNSLPNEALNL-FVEMQYNSKPNSITMACILPACASL 465

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
           A LERG E+H   +R     D  + +ALVDMY KCG +  A   FD++P +++ SW  MI
Sbjct: 466 AALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMI 525

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
           +GY  HG+G +A+  F++M+  G  PD V+F+ +L ACSH+GL+DEG+  F  M     +
Sbjct: 526 AGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCI 585

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
            P+ E ++C+VDLL RAG L K  +FI  MPI P++ IW  +L  C        +L  K 
Sbjct: 586 EPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGC--RIYHDVKLAEKV 643

Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
           A  +FE+EP+N   YVLLAN+YA   KWE+V K R+ +    ++K  GCSW+ +K  VH+
Sbjct: 644 AEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHI 703

Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVA 874
           FV GD SHP  + I   LK+   +M++ G+ P+ ++AL   +   KE  +  HSEKIA+A
Sbjct: 704 FVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMA 763

Query: 875 F-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
           F +L+      +R+ KNLRVCGDCH   KF+SK+V R+I+LRDSNRFHHF DG CSC  +
Sbjct: 764 FGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGH 823

Query: 934 W 934
           W
Sbjct: 824 W 824



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 132/526 (25%), Positives = 228/526 (43%), Gaps = 112/526 (21%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDL------------------------- 36
           +D +  H  I  +    D  L + L+ +YV  GDL                         
Sbjct: 118 QDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGY 177

Query: 37  ------------------------ASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACK 72
                                    SA KLFDE+ DR+ +SW  ++SGY   G+S +   
Sbjct: 178 AKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLD 237

Query: 73  MFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAM 132
           +F++M+  G   +   + SV+  C   G      G  +H   +K++   +  ++N L+ M
Sbjct: 238 LFEQMLLLGINTDLATMVSVVAGCSNTGM--LLLGRALHGYAIKASFGKELTLNNCLLDM 295

Query: 133 YGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKP 192
           Y     + + A ++FE +  R ++SW S+I+ Y++ G +    +LF  M++EG    + P
Sbjct: 296 YSKS-GNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEG----ISP 350

Query: 193 NEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           + +T  +++ A A + +L      + +   +K+  + SDL+V +AL+  +A+ G+   A 
Sbjct: 351 DIFTITTILHACACTGLLENG---KDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAH 407

Query: 252 KIFEQMIQKNVVSMNGLMEGRRK------------------------------------- 274
            +F +M  K++VS N ++ G  K                                     
Sbjct: 408 SVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNSITMACILPACASLAA 467

Query: 275 ---GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
              G+E+HG+++R+G      V N LV+MY KCG +  +R +F  +  KD VSW  MI+G
Sbjct: 468 LERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAG 527

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
              +G   EAI  F  MR  G+     S IS L +C+  G +       G G    + ++
Sbjct: 528 YGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLL-----DEGWGFFNMMRNN 582

Query: 392 VSVSN------ALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI 430
             +         ++ L A AG LS+  K   +MP E D   W +++
Sbjct: 583 CCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALL 628



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 177/392 (45%), Gaps = 64/392 (16%)

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           +G    +  L++++ K  L++R         T+ ++L   +     + G ++H+ +   +
Sbjct: 81  LGNLRRAMELINQSPKPDLELR---------TYCSVLQLCADLKSIQDGRRIHSIIQSND 131

Query: 490 VANETTIENALLSCYGKCGEMDDCEKI-------------------------------FA 518
           V  +  + + L+  Y  CG++ +  +I                               F 
Sbjct: 132 VEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFK 191

Query: 519 RMSE-----------------RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
           RM E                  RD +SWNSMISGY+ N L  K ++L   M+  G   D 
Sbjct: 192 RMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDL 251

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
            T  +V++ C++   L  G  +H   ++A    ++ + + L+DMYSK G ++ A + F+ 
Sbjct: 252 ATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFET 311

Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           M  R+V SW SMI+GYAR G  D ++ LF +M+ +G  PD  T   +L AC+  GL++ G
Sbjct: 312 MGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENG 371

Query: 682 FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACC 741
            K   +  +   +   L   + ++D+  + G +       ++M +  + + W T++G   
Sbjct: 372 -KDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVK-DIVSWNTMIGG-- 427

Query: 742 RANCRKTELGRKAANMLFEMEPQNAVNYVLLA 773
                K  L  +A N+  EM+  +  N + +A
Sbjct: 428 ---YSKNSLPNEALNLFVEMQYNSKPNSITMA 456



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 161/342 (47%), Gaps = 18/342 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ K  H  I ++    D+F+ N L+++Y + G +  A  +F EM  ++ VSW  ++ GY
Sbjct: 369 ENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGY 428

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +   + NEA  +F EM +     N   +  +L AC     +  + G ++H  +L++  + 
Sbjct: 429 SKNSLPNEALNLFVEM-QYNSKPNSITMACILPACASL--AALERGQEIHGHILRNGFSL 485

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V+N L+ MY  C  +   AR +F+ I  +DL+SW  +I+ Y   G        F+ M
Sbjct: 486 DRHVANALVDMYLKC-GALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEM 544

Query: 182 QREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           +  G    ++P+E +F S++ A ++S +L   +    ++         S+ Y  + +V  
Sbjct: 545 RNSG----IEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHY--ACIVDL 598

Query: 241 FARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG-- 296
            AR GN   A K  + M I+ +      L+ G R   +V     +   +F++     G  
Sbjct: 599 LARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYY 658

Query: 297 --LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
             L N+YA+    ++ + + R  IG+  +  N   S ++  G
Sbjct: 659 VLLANIYAEAEKWEEVKKL-RERIGRRGLRKNPGCSWIEIKG 699



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 130/339 (38%), Gaps = 96/339 (28%)

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
           L+  T+ +VL  CA + +++ G  +H+      +E D V+GS LV MY  CG +    R 
Sbjct: 99  LELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRI 158

Query: 619 FDLMPVRNVYSWNS---------------------------------------------- 632
           FD +    V+ WN                                               
Sbjct: 159 FDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVIS 218

Query: 633 ---MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK-HFKSM 688
              MISGY  +G  +K L LF QM L G   D  T V V++ CS+ G++  G   H  ++
Sbjct: 219 WNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAI 278

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDK-IEEF--------------------------- 720
              +G   +L   +C++D+  ++G L+  I+ F                           
Sbjct: 279 KASFG--KELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMS 336

Query: 721 ------INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV--LL 772
                 + K  I+P+     T+L AC  A     E G+   N + E + Q+ + +V   L
Sbjct: 337 VRLFHEMEKEGISPDIFTITTILHAC--ACTGLLENGKDVHNYIKENKMQSDL-FVSNAL 393

Query: 773 ANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
            +MYA  G   D   A     E +VK     SW TM  G
Sbjct: 394 MDMYAKCGSMGD---AHSVFSEMQVKDIV--SWNTMIGG 427


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 291/788 (36%), Positives = 442/788 (56%), Gaps = 59/788 (7%)

Query: 198 GSLITAAYSSVLSGSYLL------QQILAMVKKAGL-LSDLYVGSALVSGFARLGNFYYA 250
           G +  AA S VL    L+      +Q+  +  K G   +++ VG+ALV  + + G     
Sbjct: 95  GRVQGAAVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDG 154

Query: 251 RKIFEQMIQKNVVS----MNGLMEGRR--------------------------------- 273
           R +FE M ++NVV+    + G ++GR                                  
Sbjct: 155 RVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQ 214

Query: 274 ----KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
                G+ VH   ++ G    V V N L+NMY+KCG ++++++VFR M  +D VSWNT++
Sbjct: 215 GAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLM 274

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
           +GL  N    EA+  F   R      S  +  + +  CA+L  + L +Q+H   LK G  
Sbjct: 275 AGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFH 334

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           SD +V  A++  Y+  G L     +F LMP   + VSW ++IG    + A +  A   + 
Sbjct: 335 SDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQN-ADIPLAAALFS 393

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            MR     PN  T+  +L A    S+  L  Q+HAQ+IK N  +  ++  ALL+ Y K G
Sbjct: 394 RMREDNVKPNEFTYSTVLTA----SIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKLG 449

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
             ++   IF +M + +D V+W++M+S Y        A N+   M  +G + + FT ++ +
Sbjct: 450 NTEEALSIF-KMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAI 508

Query: 569 SACAS-VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
            ACAS  A +++G + HA  ++   +  + +GSALV MY++ G ID A   F+    R++
Sbjct: 509 DACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDL 568

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            SWNSMISGYA+HG+  +AL  F QM+  G   D  TF+ V+  C+HAGLV EG ++F S
Sbjct: 569 VSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDS 628

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           M   + + P +E +SCMVDL  RAG+LD+    I  MP    +++WRT+LGA CR + + 
Sbjct: 629 MVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGA-CRVH-KN 686

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
            ELG+ AA  L  +EP ++  YVLL+N+YA+ G+W++  + RK M   +VKKEAGCSW+ 
Sbjct: 687 VELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQ 746

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
           +K+ VH F+A D+SHP  + IY KLK +  +++  GY P T   L D+  E KE ++  H
Sbjct: 747 IKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMH 806

Query: 868 SEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SE++A+AF ++    + P++I+KNLRVCGDCH   K +S I  REI++RD +RFHHFN G
Sbjct: 807 SERLALAFGLIATPPRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAG 866

Query: 927 KCSCGDYW 934
            CSCGD+W
Sbjct: 867 ACSCGDFW 874



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 216/472 (45%), Gaps = 62/472 (13%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q +K G    VF+CN+LIN+Y + G +  A  +F +M  R+ VSW  +++G       
Sbjct: 224 HAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQ 283

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA ++F +   +   L++    +V++ C            Q+H  VLK     DG V  
Sbjct: 284 LEALQLFHDSRASMAKLSQSTYSTVIKLCANL--KQLALARQLHSCVLKHGFHSDGNVMT 341

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            ++  Y  C E  D          +++++SW ++I    Q  D      LFSRM+ +   
Sbjct: 342 AIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMRED--- 398

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
            ++KPNE+T+ +++TA      S   LL QI A + K        VG+AL++ +++LGN 
Sbjct: 399 -NVKPNEFTYSTVLTA------SIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNT 451

Query: 248 YYARKIFEQMIQKNVV-------------------------SMNGL-------------- 268
             A  IF+ +  K+VV                         SM G+              
Sbjct: 452 EEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDAC 511

Query: 269 ---MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                G  +G++ H   I+    D + VG+ LV MYA+ G+ID +R VF     +D VSW
Sbjct: 512 ASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSW 571

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N+MISG  Q+G  +EA+  F  M   G+     + ++ +  C   G +  GQQ       
Sbjct: 572 NSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDS--- 628

Query: 386 LGLDSDVSVS----NALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           + +D ++S +    + ++ LY+ AG L   + +   MP     + W +++GA
Sbjct: 629 MVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGA 680



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 138/569 (24%), Positives = 252/569 (44%), Gaps = 53/569 (9%)

Query: 7   FHLQILKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
            H   +K GF   +V +   L+++Y++ G +     +F+ MP RN V+W  +++GY    
Sbjct: 121 LHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGR 180

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
             ++   +F  M   G   N +   SVL A    G      G +VH   +K        V
Sbjct: 181 ACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQG--AVDLGRRVHAQSVKFGCRSTVFV 238

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
            N LI MY  C    + A+ +F ++ETRD++SWN++++        +   +LF       
Sbjct: 239 CNSLINMYSKC-GLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLF-----HD 292

Query: 186 FRYSL-KPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
            R S+ K ++ T+ ++I    +  L    L +Q+ + V K G  SD  V +A++  +++ 
Sbjct: 293 SRASMAKLSQSTYSTVIKLCAN--LKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKC 350

Query: 245 GNFYYARKIFEQMI-QKNVVSMNGLMEGRRKG---------------------------- 275
           G    A  IF  M   +NVVS   ++ G  +                             
Sbjct: 351 GELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTV 410

Query: 276 ---------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                     ++H  +I++      +VG  L+  Y+K G  +++ S+F+ +  KD V+W+
Sbjct: 411 LTASIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWS 470

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS-LGWIMLGQQIHGEGLK 385
            M+S   Q G  + A   F  M   G+  + F++ S + +CAS    I  G+Q H   +K
Sbjct: 471 AMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIK 530

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
                 + V +AL+++YA  G +     VF    + D VSWNS+I  +A       EA+ 
Sbjct: 531 YRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYA-QHGYSKEALD 589

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCY 504
            +  M   G   +G TF+ ++   +   + K G Q   + V+ +N++      + ++  Y
Sbjct: 590 TFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLY 649

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            + G++D+   +   M      + W +++
Sbjct: 650 SRAGKLDETMNLIEGMPFPAGAMVWRTLL 678



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 139/279 (49%), Gaps = 17/279 (6%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP-DRNSVSWACIVSGYT 62
           A+  H  +LKHGF  D  +   +++ Y + G+L  A  +F  MP  +N VSW  ++ G  
Sbjct: 321 ARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCI 380

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                  A  +F  M       N +   +VL A      S      Q+H  ++K+N    
Sbjct: 381 QNADIPLAAALFSRMREDNVKPNEFTYSTVLTA------SIPILLPQIHAQIIKTNYQHA 434

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V   L+A Y S L +T+ A  IF+ I+ +D+++W++++S YSQ GD      +F +M 
Sbjct: 435 PSVGTALLASY-SKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMS 493

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            +G    +KPNE+T  S I A  S   +G    +Q  A+  K      + VGSALV+ +A
Sbjct: 494 MQG----MKPNEFTISSAIDACASPT-AGIDQGRQFHAISIKYRYQDAICVGSALVTMYA 548

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY 281
           R G+   AR +FE+   +++VS N ++ G  +    HGY
Sbjct: 549 RKGSIDSARIVFERQTDRDLVSWNSMISGYAQ----HGY 583


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 316/961 (32%), Positives = 506/961 (52%), Gaps = 132/961 (13%)

Query: 27  INVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM----VR-AG 81
           I    R+G L  A ++FD MP R+ ++W  ++S Y + GM  +A  +F  +    VR A 
Sbjct: 40  IRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTAT 99

Query: 82  FLLNRYA-LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA---MYGSCL 137
            LL+ YA LG VL A                       + FDG+     +A   M    +
Sbjct: 100 ILLSGYARLGRVLDA----------------------RRVFDGMPERNTVAWNAMVSCYV 137

Query: 138 ESTDC--ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
           ++ D   ARR+F+ + +RD+ SWNS+++ Y      +  + LF +M +            
Sbjct: 138 QNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQR----------- 186

Query: 196 TFGSLITAAYSSVLSGSYLLQQ------ILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
              +L+T  ++ ++SG   ++Q      I  M+   G   D    ++++S    L +   
Sbjct: 187 ---NLVT--WTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDL-- 239

Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK-CGTID 308
                            G++E  R        ++++G    V +G  ++N+Y +    +D
Sbjct: 240 -----------------GVLEVLRP------LVLKTGFESDVVIGTSILNVYTRDASALD 276

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMS--SNFSLISTLSS 366
            +   F  M+ ++  +W+TMI+ L   G  + AI  +    RD + S  S  +L++ L+ 
Sbjct: 277 IAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYG---RDPVKSIPSQTALLTGLAR 333

Query: 367 CASLGWI-MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           C  +    +L +QI         D  V   NA+++ Y   G +    ++F  MP  + +S
Sbjct: 334 CGRITEARILFEQIP--------DPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTIS 385

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           W  +I  +A +     EA+     + R G  P+  +  +   A S     + G QVH+  
Sbjct: 386 WAGMIAGYAQN-GRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLA 444

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
           +K      + + NAL+S YGKC  M+   ++F RM   +D VSWNS I+  + N +L  A
Sbjct: 445 VKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRM-RVKDTVSWNSFIAALVQNNMLEDA 503

Query: 546 MNLV----------WF---------------------MMQRGQRLDHFTFATVLSACASV 574
            ++           W                      M+   ++ +      +LS C  +
Sbjct: 504 RHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGL 563

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
            + + G ++H   ++  ++ ++++ +AL+ MY KCG  D + + FD M  R++++WN+ I
Sbjct: 564 GSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD-SHKVFDSMEERDIFTWNTFI 622

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
           +G A+HG G +A+ ++  M+  G LP+ VTFVG+L+ACSHAGLVDEG++ FKSMS+ YGL
Sbjct: 623 TGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGL 682

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
            P LE ++CMVDLLGR G++   E+FI  MPI P+++IW  +LGAC     +  E+GR+A
Sbjct: 683 TPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGAC--KIHKNAEIGRRA 740

Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
           A  LF  EP NA NYV+L+N+Y+S G W +VA+ RK MK+  V KE GCSW+ +++ VH 
Sbjct: 741 AEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHS 800

Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVA 874
           FV GD+ H + + I   L++L   +R  GYVP T+F L D++ E KE  + YHSEK+AVA
Sbjct: 801 FVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVA 860

Query: 875 FVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
           + L    K +PI+IMKNLR+CGDCH+  KF+S +  R+I +RD NRFHHF +G CSCGD+
Sbjct: 861 YGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHHFRNGSCSCGDF 920

Query: 934 W 934
           W
Sbjct: 921 W 921



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 173/660 (26%), Positives = 289/660 (43%), Gaps = 93/660 (14%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N +++ YV+ GD+  A +LFD MP R+  SW  +V+GY H     +A  +FK+M +   +
Sbjct: 130 NAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLV 189

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD-- 141
                +   +R  Q  G     F M  H         F  ++S V        LE     
Sbjct: 190 TWTVMISGYVRIEQH-GKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPL 248

Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISV-FKLFSRMQREGFRYSLKPNEYTFGSL 200
             +  FE     D++   SI++VY++    + +  K F  M        ++ NEYT+ ++
Sbjct: 249 VLKTGFES----DVVIGTSILNVYTRDASALDIAIKFFDGM--------VERNEYTWSTM 296

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
           I A     LS    +   +A+  +  + S +   +AL++G AR G    AR +FEQ+   
Sbjct: 297 IAA-----LSHGGRIDAAIAVYGRDPVKS-IPSQTALLTGLARCGRITEARILFEQIPDP 350

Query: 261 NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
            VVS N ++ G                             Y + G +D+++ +F  M  +
Sbjct: 351 IVVSWNAMITG-----------------------------YMQNGMVDEAKELFDRMPFR 381

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           +++SW  MI+G  QNG  EEA+    A+ R+G++ S  SL S+  +C+ +G +  G+Q+H
Sbjct: 382 NTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVH 441

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
              +K G   +  V NAL+S+Y     +    +VF  M   D VSWNS I A   +  L 
Sbjct: 442 SLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLE 501

Query: 441 ------------------------------SEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
                                          EAV+++  M      PN      +L+   
Sbjct: 502 DARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCG 561

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
                KLG Q+H   IK+ + +E  + NAL+S Y KCG   D  K+F  M E RD  +WN
Sbjct: 562 GLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCG-CADSHKVFDSMEE-RDIFTWN 619

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC---- 586
           + I+G   + L  +A+ +   M   G   +  TF  +L+AC+    ++ G +        
Sbjct: 620 TFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRD 679

Query: 587 -GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGD 644
            G+   LE      + +VD+  + G +  A +F   MP+  +   W++++     H + +
Sbjct: 680 YGLTPLLEH----YACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAE 735



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 145/532 (27%), Positives = 242/532 (45%), Gaps = 64/532 (12%)

Query: 11  ILKHGFAYDVFLCNTLINVYVR-VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           +LK GF  DV +  +++NVY R    L  A K FD M +RN  +W+ +++  +H G  + 
Sbjct: 249 VLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDA 308

Query: 70  ACKMF-KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV 128
           A  ++ ++ V++  + ++ AL + L  C     +   F      +V+  N    G + N 
Sbjct: 309 AIAVYGRDPVKS--IPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNG 366

Query: 129 LIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRY 188
           ++          D A+ +F+ +  R+ ISW  +I+ Y+Q G +     L   + R G   
Sbjct: 367 MV----------DEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLP 416

Query: 189 SLKPNEYT------FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           SL     +       G+L T             +Q+ ++  KAG   + YV +AL+S + 
Sbjct: 417 SLSSLTSSFLACSHIGALETG------------RQVHSLAVKAGCQFNSYVCNALISMYG 464

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
           +  N  Y R++F +M  K+ VS N  +            L+++ +               
Sbjct: 465 KCRNMEYVRQVFNRMRVKDTVSWNSFIAA----------LVQNNM--------------- 499

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIS 362
               ++D+R +F  M+ +D VSW T+IS   Q    +EA+  F  M  +    ++  L  
Sbjct: 500 ----LEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTI 555

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
            LS C  LG   LGQQIH   +K G+DS++ V+NAL+S+Y   G  +   KVF  M E D
Sbjct: 556 LLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCG-CADSHKVFDSMEERD 614

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
             +WN+ I   A    L  EA+K Y  M   G  PN VTF+ +L A S   +   G Q  
Sbjct: 615 IFTWNTFITGCA-QHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFF 673

Query: 483 AQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
             + + Y +         ++   G+ G++   EK    M    D V W++++
Sbjct: 674 KSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALL 725



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 148/651 (22%), Positives = 268/651 (41%), Gaps = 128/651 (19%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVG 294
           SA +   ARLG    AR++F+ M  +++++ N ++        +    I   LFD ++ G
Sbjct: 37  SARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARI---LFDAISGG 93

Query: 295 NG-----LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
           N      L++ YA+ G + D+R VF  M  +++V+WN M+S   QNG    A   F AM 
Sbjct: 94  NVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMP 153

Query: 350 RDGLMSSN---------------FSLISTLSSCASLGW-IMLGQQI----HGEGLKL--- 386
              + S N               ++L   +     + W +M+   +    HG+G  +   
Sbjct: 154 SRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRM 213

Query: 387 ---------------------GLDSDVSVSNALLSLYADAGY------------------ 407
                                GL  D+ V   L  L    G+                  
Sbjct: 214 MHHEGASPDQSNFASVLSAVTGL-QDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDA 272

Query: 408 --LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
             L   +K F  M E ++ +W+++I A +    + +    Y  D  ++   P+    +  
Sbjct: 273 SALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKS--IPSQTALLTG 330

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIE-NALLSCYGKCGEMDDCEKIFARMSERR 524
           LA        + G    A+++   + +   +  NA+++ Y + G +D+ +++F RM   R
Sbjct: 331 LA--------RCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMP-FR 381

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
           + +SW  MI+GY  N    +A++L+  + + G      +  +   AC+ +  LE G +VH
Sbjct: 382 NTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVH 441

Query: 585 ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS------------ 632
           +  V+A  +F+  + +AL+ MY KC  ++Y  + F+ M V++  SWNS            
Sbjct: 442 SLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLE 501

Query: 633 -------------------MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
                              +IS YA+   GD+A+  F  M  +   P+      +LS C 
Sbjct: 502 DARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCG 561

Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
             G    G +   +++  +G+  +L   + ++ +  + G  D  + F + M    +   W
Sbjct: 562 GLGSAKLG-QQIHTVAIKHGMDSELIVANALMSMYFKCGCADSHKVF-DSME-ERDIFTW 618

Query: 734 RTVLGACCRANCRKTELGRKAANMLFEMEP----QNAVNYVLLANMYASGG 780
            T +  C +       LGR+A  M   ME      N V +V L N  +  G
Sbjct: 619 NTFITGCAQHG-----LGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAG 664



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 168/377 (44%), Gaps = 56/377 (14%)

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           D S  +A +   A  G L    +VF  MP  D ++WNS+I A+ +S  L  E  +   D 
Sbjct: 32  DKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGML--EDARILFDA 89

Query: 451 RRAGWSPNGVTFINILAAASSFS-MGKLGHQVHAQVIKYNVANETTIE-NALLSCYGKCG 508
              G         N+  A    S   +LG  + A+ +   +    T+  NA++SCY + G
Sbjct: 90  ISGG---------NVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNG 140

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR------------- 555
           ++    ++F  M   RD  SWNSM++GY H+  +  A NL   M QR             
Sbjct: 141 DITMARRLFDAMPS-RDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYV 199

Query: 556 ------------------GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
                             G   D   FA+VLSA   +  L     +    ++   E DVV
Sbjct: 200 RIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVV 259

Query: 598 IGSALVDMYSK-CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
           IG++++++Y++    +D A +FFD M  RN Y+W++MI+  +  G  D A+ ++ +    
Sbjct: 260 IGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGR---- 315

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
            P+    +   +L+  +  G + E    F+ +       P +  ++ M+    + G +D+
Sbjct: 316 DPVKSIPSQTALLTGLARCGRITEARILFEQIPD-----PIVVSWNAMITGYMQNGMVDE 370

Query: 717 IEEFINKMPITPNSLIW 733
            +E  ++MP   N++ W
Sbjct: 371 AKELFDRMPFR-NTISW 386



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 136/303 (44%), Gaps = 47/303 (15%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVY---------------VRVGD----------- 35
           +  +  H   +K G  ++ ++CN LI++Y               +RV D           
Sbjct: 435 ETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAAL 494

Query: 36  -----LASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
                L  A  +FD M  R+ VSW  I+S Y      +EA + FK M+      N   L 
Sbjct: 495 VQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILT 554

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA--RRIFE 148
            +L  C   G +  K G Q+H + +K     + +V+N L++MY  C     CA   ++F+
Sbjct: 555 ILLSVCGGLGSA--KLGQQIHTVAIKHGMDSELIVANALMSMYFKC----GCADSHKVFD 608

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSS 207
            +E RD+ +WN+ I+  +Q G      K++  M+  G    + PNE TF  L+ A +++ 
Sbjct: 609 SMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVG----VLPNEVTFVGLLNACSHAG 664

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK-IFEQMIQKNVVSMN 266
           ++   +  Q   +M +  GL   L   + +V    R G+   A K I++  I+ + V  +
Sbjct: 665 LVDEGW--QFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWS 722

Query: 267 GLM 269
            L+
Sbjct: 723 ALL 725


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 284/763 (37%), Positives = 429/763 (56%), Gaps = 49/763 (6%)

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--- 271
           L+QIL +V K GL  + +  + LVS F R G+   A ++FE +  K  V  + +++G   
Sbjct: 53  LRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAK 112

Query: 272 --------------------------------------RRKGKEVHGYLIRSGL-FDMVA 292
                                                  R GKE+HG L++SG   D+ A
Sbjct: 113 VSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFA 172

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           +  GL NMYAKC  ++++R VF  M  +D VSWNT+++G  QNG    A+    +M  + 
Sbjct: 173 M-TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN 231

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
           L  S  +++S L + ++L  I +G++IHG  ++ G DS V++S AL+ +YA  G L    
Sbjct: 232 LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETAR 291

Query: 413 KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
           ++F  M E + VSWNS+I A+  +E    EA+  +  M   G  P  V+ +  L A +  
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNEN-PKEAMLIFQKMLDEGVKPTDVSVMGALHACADL 350

Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
              + G  +H   ++  +    ++ N+L+S Y KC E+D    +F ++ + R  VSWN+M
Sbjct: 351 GDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL-QSRTLVSWNAM 409

Query: 533 ISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL 592
           I G+  N     A+N    M  R  + D FT+ +V++A A ++       +H   +R+CL
Sbjct: 410 ILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL 469

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
           + +V + +ALVDMY+KCG I  A   FD+M  R+V +WN+MI GY  HG G  AL LF +
Sbjct: 470 DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEE 529

Query: 653 MKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG 712
           M+     P+ VTF+ V+SACSH+GLV+ G K F  M + Y +   ++ +  MVDLLGRAG
Sbjct: 530 MQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAG 589

Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLL 772
            L++  +FI +MP+ P   ++  +LGAC     +      KAA  LFE+ P +   +VLL
Sbjct: 590 RLNEAWDFIMQMPVKPAVNVYGAMLGAC--QIHKNVNFAEKAAERLFELNPDDGGYHVLL 647

Query: 773 ANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKL 832
           AN+Y +   WE V + R +M    ++K  GCS V +K+ VH F +G  +HP+   IY  L
Sbjct: 648 ANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFL 707

Query: 833 KELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNL 891
           ++L   +++AGYVP T   L  +E + KE L+S HSEK+A++F +L   +   I + KNL
Sbjct: 708 EKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNL 766

Query: 892 RVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           RVC DCH+A K+IS + GREIV+RD  RFHHF +G CSCGDYW
Sbjct: 767 RVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 165/595 (27%), Positives = 289/595 (48%), Gaps = 70/595 (11%)

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGM-QVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           A  LL R    S L+  ++  P  FK G+ Q H    K       LVS  L   YGS   
Sbjct: 40  AALLLER---CSSLKELRQILPLVFKNGLYQEHFFQTK-------LVS--LFCRYGS--- 84

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             D A R+FE I+++  + +++++  +++  D     + F RM+ +     ++P  Y F 
Sbjct: 85  -VDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD----DVEPVVYNFT 139

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
            L+        +   + ++I  ++ K+G   DL+  + L + +A+      ARK+F++M 
Sbjct: 140 YLLKVCGDE--AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197

Query: 259 QKNVVSMNGLMEGRRK-----------------------------------------GKE 277
           ++++VS N ++ G  +                                         GKE
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKE 257

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +HGY +RSG   +V +   LV+MYAKCG+++ +R +F  M+ ++ VSWN+MI    QN  
Sbjct: 258 IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNEN 317

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
            +EA++ F  M  +G+  ++ S++  L +CA LG +  G+ IH   ++LGLD +VSV N+
Sbjct: 318 PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNS 377

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+S+Y     +     +F  +     VSWN++I  FA +   + +A+ Y+  MR     P
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPI-DALNYFSQMRSRTVKP 436

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           +  T+++++ A +  S+      +H  V++  +     +  AL+  Y KCG +     IF
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF 496

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
             MSER    +WN+MI GY  +     A+ L   M +   + +  TF +V+SAC+    +
Sbjct: 497 DMMSERH-VTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555

Query: 578 ERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR---NVY 628
           E G++  +       +E  +    A+VD+  + GR++ A  F   MPV+   NVY
Sbjct: 556 EAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVY 610



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 213/476 (44%), Gaps = 62/476 (13%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  ++K GF+ D+F    L N+Y +   +  A K+FD MP+R+ VSW  IV+GY+  
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 214

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           GM+  A +M K M       +   + SVL A           G ++H   ++S   FD L
Sbjct: 215 GMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL--RLISVGKEIHGYAMRSG--FDSL 270

Query: 125 V--SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
           V  S  L+ MY  C  S + AR++F+ +  R+++SWNS+I  Y Q  +      +F +M 
Sbjct: 271 VNISTALVDMYAKC-GSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML 329

Query: 183 REGFRYSLKPNEYT-FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            EG    +KP + +  G+L   A    L     + ++     + GL  ++ V ++L+S +
Sbjct: 330 DEG----VKPTDVSVMGALHACADLGDLERGRFIHKLSV---ELGLDRNVSVVNSLISMY 382

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG------------------------------ 271
            +      A  +F ++  + +VS N ++ G                              
Sbjct: 383 CKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYV 442

Query: 272 -----------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                          K +HG ++RS L   V V   LV+MYAKCG I  +R +F  M  +
Sbjct: 443 SVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSER 502

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-- 378
              +WN MI G   +G  + A+  F  M++  +  +  + +S +S+C+  G +  G +  
Sbjct: 503 HVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF 562

Query: 379 -IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
            +  E   + L  D     A++ L   AG L+        MP    V+ + +++GA
Sbjct: 563 YMMKENYSIELSMD--HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGA 616



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 49/100 (49%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +  AK  H  +++     +VF+   L+++Y + G +  A  +FD M +R+  +W  ++ G
Sbjct: 454 THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           Y   G    A ++F+EM +     N     SV+ AC   G
Sbjct: 514 YGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 319/963 (33%), Positives = 496/963 (51%), Gaps = 76/963 (7%)

Query: 24   NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH-KGMSNEACKMFKEMVRAGF 82
            N +IN+Y + G L  A  +F  +P+++ VSW  +   Y   +    +A ++F+EM+    
Sbjct: 170  NAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPL 229

Query: 83   LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC 142
              N     + L AC     +  + G  +H L+ +++  FD L SN LI MYG C +  + 
Sbjct: 230  APNVITFITALGAC-----TSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGD-WEG 283

Query: 143  ARRIFEEIETR---DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
            A  +F+ + +R   DL+SWN++IS   + G       +F R++ EG R    PN  T  +
Sbjct: 284  AYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMR----PNSVTLIT 339

Query: 200  LITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
            ++ A A S V  G+   +     + ++G L D+ +G+A++S +A+ G F  A  +F ++ 
Sbjct: 340  ILNALAASGVDFGAA--RGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIR 397

Query: 259  QK-NVVSMNGLM---EGRRK--------------------------------------GK 276
             K +V+S N ++   E R+                                       G+
Sbjct: 398  WKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGR 457

Query: 277  EVHGY-LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI--GKDSVSWNTMISGLD 333
            ++H   L R   +   +V   LV+MY KCG+I ++  VF+ M    +  V+WN M+    
Sbjct: 458  KIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYA 517

Query: 334  QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC-ASLGWIMLGQQIHGEGLKLGLDSDV 392
            QN   +EA      M + G++    S  S LSSC  S    +L   I   G +       
Sbjct: 518  QNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYR-----SA 572

Query: 393  SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
             +  AL+S++     L +   VF  M   D VSW +++ A A++     E    +  M+ 
Sbjct: 573  CLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDF-KEVHNLFRRMQL 631

Query: 453  AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
             G  P+  T    L    + +   LG  +HA V +  +  +  +ENALL+ Y  CG+  +
Sbjct: 632  EGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWRE 691

Query: 513  CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
                F  M + RD VSWN M + Y    L  +A+ L   M   G + D  TF+T L+   
Sbjct: 692  ALSFFETM-KARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSG 750

Query: 573  SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
              A +  G   HA    + L+ DV + + LV +Y+KCG++D A   F       V   N+
Sbjct: 751  GSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNA 810

Query: 633  MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
            +I   A+HG  ++A+ +F +M+ +G  PD  T V ++SAC HAG+V+EG   F +M + +
Sbjct: 811  IIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYF 870

Query: 693  GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
            G+ P LE ++C VDLLGRAG+L+  E+ I KMP   N+L+W ++LG C        ELG 
Sbjct: 871  GISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQG--DAELGE 928

Query: 753  KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
            + A  + E++P N+  +V+L+N+Y + GKW+D    RK M +  VK   G SW  +   V
Sbjct: 929  RCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQV 988

Query: 813  HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
            H FVAGD SHP+ D IY  L +L   MR AGY         D+E E KE  + YHSE+IA
Sbjct: 989  HEFVAGDRSHPKTDEIYVVLDKLELLMRRAGYEADKG---LDVEDELKEKALGYHSERIA 1045

Query: 873  VAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
            +AF ++    +  ++I+KNLRVCGDCH+A K+IS ++GREI++RDS RFHHF++G CSC 
Sbjct: 1046 IAFGLIATPPETTLKIVKNLRVCGDCHTATKYISMVMGREIIVRDSLRFHHFSNGTCSCK 1105

Query: 932  DYW 934
            D W
Sbjct: 1106 DCW 1108



 Score =  296 bits (759), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 231/817 (28%), Positives = 376/817 (46%), Gaps = 90/817 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  I   G    +FL N LIN+YVR G L  A  +F +M +RN VSW  ++S     G  
Sbjct: 48  HELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAF 107

Query: 68  NEACKMFKEM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLV----LKSNQTFD 122
             A  +F+ M + +    N Y L ++L AC          G  +H ++    L+   T  
Sbjct: 108 ARAFALFRTMLLESSAAPNSYTLVAMLNAC--ANSRDLAIGRSIHAMIWELGLERASTTA 165

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR----GDTISVFKLF 178
            LV N +I MY  C    D A  +F  I  +D++SW ++   Y+Q      D + +F   
Sbjct: 166 TLVGNAMINMYAKCGSLED-AIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIF--- 221

Query: 179 SRMQREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
               RE     L PN  TF   ITA  A +S+  G++L     +++ +A L  D    +A
Sbjct: 222 ----REMLLQPLAPNVITF---ITALGACTSLRDGTWL----HSLLHEASLGFDPLASNA 270

Query: 237 LVSGFARLGNFYYARKIFEQMIQK---NVVSMNGL---------------------MEGR 272
           L++ + + G++  A  +F+ M  +   ++VS N +                     +EG 
Sbjct: 271 LINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGM 330

Query: 273 RK---------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
           R                       +  HG +  SG    V +GN +++MYAKCG    + 
Sbjct: 331 RPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAW 390

Query: 312 SVFRFMIGK-DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
           +VFR +  K D +SWNTM+   +    + + +  F  M   G+  +  S I+ L++C++ 
Sbjct: 391 AVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNS 450

Query: 371 GWIMLGQQIHGEGLKLGLD-SDVSVSNALLSLYADAGYLSRCLKVF--FLMPEHDQVSWN 427
             +  G++IH   L    D  + SV+  L+S+Y   G +S    VF    +P    V+WN
Sbjct: 451 EALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWN 510

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
            ++GA+A ++    EA    ++M + G  P+ ++F ++L++           QV    I 
Sbjct: 511 VMLGAYAQNDR-SKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEA----QVLRMCIL 565

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
            +      +E AL+S +G+C E++    +F  M +  D VSW +M+S    N    +  N
Sbjct: 566 ESGYRSACLETALISMHGRCRELEQARSVFNEM-DHGDVVSWTAMVSATAENRDFKEVHN 624

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
           L   M   G   D FT AT L  C +  TL  G  +HAC     LE D+ + +AL++MYS
Sbjct: 625 LFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYS 684

Query: 608 KCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVG 667
            CG    A  FF+ M  R++ SWN M + YA+ G   +A+ LF QM+L+G  PD +TF  
Sbjct: 685 NCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFST 744

Query: 668 VLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPIT 727
            L+    + LV +G K F +++   GL   +   + +V L  + G+LD+       M + 
Sbjct: 745 TLNVSGGSALVSDG-KLFHALAAESGLDSDVSVATGLVKLYAKCGKLDE------AMSLF 797

Query: 728 PNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ 764
             +  W  VL         +     +A  M ++M+ +
Sbjct: 798 RGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQE 834



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 186/621 (29%), Positives = 302/621 (48%), Gaps = 71/621 (11%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G   H L+  +       + N LI MY  C  S + A  IF ++E R+++SW ++IS  +
Sbjct: 44  GKHAHELIANAGLEQHLFLGNCLINMYVRC-GSLEEAHAIFSKMEERNVVSWTALISANA 102

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
           Q G     F LF  M  E    S  PN YT  +++ A  +S      + + I AM+ + G
Sbjct: 103 QCGAFARAFALFRTMLLES---SAAPNSYTLVAMLNACANS--RDLAIGRSIHAMIWELG 157

Query: 227 L----LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL-----MEGR----- 272
           L     +   VG+A+++ +A+ G+   A  +F  + +K+VVS   +      E R     
Sbjct: 158 LERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDA 217

Query: 273 -----------------------------RKGKEVHGYLIRSGL-FDMVAVGNGLVNMYA 302
                                        R G  +H  L  + L FD +A  N L+NMY 
Sbjct: 218 LRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEASLGFDPLA-SNALINMYG 276

Query: 303 KCGTIDDSRSVFRFMIGK---DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
           KCG  + + SVF+ M  +   D VSWN MIS   + G + +A+  F  +R +G+  ++ +
Sbjct: 277 KCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVT 336

Query: 360 LISTLSSCASLGWIMLG--QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
           LI+ L++ A+ G +  G  +  HG   + G   DV + NA++S+YA  G+ S    VF  
Sbjct: 337 LITILNALAASG-VDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRR 395

Query: 418 MP-EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
           +  + D +SWN+++GA  D ++   + V  +  M  AG  PN V+FI IL A S+     
Sbjct: 396 IRWKCDVISWNTMLGASEDRKSF-GKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALD 454

Query: 477 LGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMS-ERRDEVSWNSMIS 534
            G ++H+ ++ +     E+++   L+S YGKCG + + E +F  M    R  V+WN M+ 
Sbjct: 455 FGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLG 514

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA--CASVATLERGMEVHACGVR-AC 591
            Y  N+   +A   +  M+Q G   D  +F +VLS+  C+  A + R M +   G R AC
Sbjct: 515 AYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLR-MCILESGYRSAC 573

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
           LE      +AL+ M+ +C  ++ A   F+ M   +V SW +M+S  A +    +   LF 
Sbjct: 574 LE------TALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFR 627

Query: 652 QMKLDGPLPDHVTFVGVLSAC 672
           +M+L+G +PD  T    L  C
Sbjct: 628 RMQLEGVIPDKFTLATTLDTC 648



 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 253/491 (51%), Gaps = 19/491 (3%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           KGK  H  +  +GL   + +GN L+NMY +CG+++++ ++F  M  ++ VSW  +IS   
Sbjct: 43  KGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANA 102

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLD--- 389
           Q G +  A   F  M  +   + N ++L++ L++CA+   + +G+ IH    +LGL+   
Sbjct: 103 QCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERAS 162

Query: 390 -SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
            +   V NA++++YA  G L   + VF  +PE D VSW ++ GA+A       +A++ + 
Sbjct: 163 TTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFR 222

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
           +M     +PN +TFI  L A +S    + G  +H+ + + ++  +    NAL++ YGKCG
Sbjct: 223 EMLLQPLAPNVITFITALGACTSL---RDGTWLHSLLHEASLGFDPLASNALINMYGKCG 279

Query: 509 EMDDCEKIFARMSERR--DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
           + +    +F  M+ R+  D VSWN+MIS  +       AM +   +   G R +  T  T
Sbjct: 280 DWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLIT 339

Query: 567 VLSACASVAT---LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +L+A A+        RG   H     +    DVVIG+A++ MY+KCG    A   F  + 
Sbjct: 340 ILNALAASGVDFGAARGF--HGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIR 397

Query: 624 VR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
            + +V SWN+M+          K +  F  M L G  P+ V+F+ +L+ACS++  +D G 
Sbjct: 398 WKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGR 457

Query: 683 K-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI-WRTVLGAC 740
           K H   +++    +      + +V + G+ G + + E    +MP+   SL+ W  +LGA 
Sbjct: 458 KIHSLILTRRRDYVES-SVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAY 516

Query: 741 CRANCRKTELG 751
            + +  K   G
Sbjct: 517 AQNDRSKEAFG 527



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 172/690 (24%), Positives = 302/690 (43%), Gaps = 78/690 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNS---VSWACIV 58
           +D    H  + +    +D    N LIN+Y + GD   A  +F  M  R     VSW  ++
Sbjct: 247 RDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMI 306

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQ--VHCLVLK 116
           S     G   +A  +F+ +   G   N   L ++L A      SG  FG     H  + +
Sbjct: 307 SASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNA---LAASGVDFGAARGFHGRIWE 363

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR-DLISWNSIISVYSQRGDTISVF 175
           S    D ++ N +I+MY  C      A  +F  I  + D+ISWN+++     R     V 
Sbjct: 364 SGYLRDVVIGNAIISMYAKC-GFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVV 422

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVG 234
             F  M   G    + PN+ +F +++ A + S  L     +  ++   ++  + S   V 
Sbjct: 423 NTFHHMLLAG----IDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESS--VA 476

Query: 235 SALVSGFARLGNFYYARKIFEQM--IQKNVVSMN---GLMEGRRKGKEVHGYLI------ 283
           + LVS + + G+   A  +F++M    +++V+ N   G      + KE  G L+      
Sbjct: 477 TMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGG 536

Query: 284 -------------------RSGLFDMVAVGNG---------LVNMYAKCGTIDDSRSVFR 315
                               + +  M  + +G         L++M+ +C  ++ +RSVF 
Sbjct: 537 VLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFN 596

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M   D VSW  M+S   +N  ++E    F  M+ +G++   F+L +TL +C +   + L
Sbjct: 597 EMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGL 656

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G+ IH    ++GL++D++V NALL++Y++ G     L  F  M   D VSWN +  A+A 
Sbjct: 657 GKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQ 716

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           +  L  EAV  +  M+  G  P+ +TF   L  +   ++   G   HA   +  + ++ +
Sbjct: 717 A-GLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVS 775

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSW-----NSMISGYIHNELLPKAMNLVW 550
           +   L+  Y KCG++D+   +F      R    W     N++I     +    +A+ + W
Sbjct: 776 VATGLVKLYAKCGKLDEAMSLF------RGACDWTVVLLNAIIGALAQHGFSEEAVKMFW 829

Query: 551 FMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC-----GVRACLEFDVVIGSALVDM 605
            M Q G R D  T  +++SAC     +E G           G+   LE      +  VD+
Sbjct: 830 KMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHY----ACFVDL 885

Query: 606 YSKCGRIDYASRFFDLMPVR-NVYSWNSMI 634
             + G++++A +    MP   N   W S++
Sbjct: 886 LGRAGQLEHAEQIIRKMPFEDNTLVWTSLL 915



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 179/385 (46%), Gaps = 14/385 (3%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L SC     +  G+  H      GL+  + + N L+++Y   G L     +F  M E + 
Sbjct: 32  LQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNV 91

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSW ++I A A   A       +   +  +  +PN  T + +L A ++     +G  +HA
Sbjct: 92  VSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHA 151

Query: 484 QVIKYNVANETT----IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
            + +  +   +T    + NA+++ Y KCG ++D   +F  + E +D VSW +M   Y   
Sbjct: 152 MIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPE-KDVVSWTAMAGAYAQE 210

Query: 540 -ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
               P A+ +   M+ +    +  TF T L AC S   L  G  +H+    A L FD + 
Sbjct: 211 RRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDGTWLHSLLHEASLGFDPLA 267

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVR---NVYSWNSMISGYARHG-HGDKALTLFSQMK 654
            +AL++MY KCG  + A   F  M  R   ++ SWN+MIS     G HGD A+ +F +++
Sbjct: 268 SNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGD-AMAIFRRLR 326

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
           L+G  P+ VT + +L+A + +G+     + F       G +  +   + ++ +  + G  
Sbjct: 327 LEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFF 386

Query: 715 DKIEEFINKMPITPNSLIWRTVLGA 739
                   ++    + + W T+LGA
Sbjct: 387 SAAWAVFRRIRWKCDVISWNTMLGA 411



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 184/432 (42%), Gaps = 48/432 (11%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S++A++  + IL+ G+     L   LI+++ R  +L  A  +F+EM   + VSW  +VS 
Sbjct: 554 SQEAQVLRMCILESGY-RSACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSA 612

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
                   E   +F+ M   G + +++ L + L  C     +    G  +H  V +    
Sbjct: 613 TAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTC--LASTTLGLGKVIHACVTEIGLE 670

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D  V N L+ MY +C +  + A   FE ++ RDL+SWN + + Y+Q G       LF +
Sbjct: 671 ADIAVENALLNMYSNCGDWRE-ALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQ 729

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           MQ EG    +KP++ TF + +  +  S L     L   LA   ++GL SD+ V + LV  
Sbjct: 730 MQLEG----VKPDKLTFSTTLNVSGGSALVSDGKLFHALA--AESGLDSDVSVATGLVKL 783

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
           +A+ G    A  +F       VV +N ++          G L + G  +        V M
Sbjct: 784 YAKCGKLDEAMSLFRGACDWTVVLLNAII----------GALAQHGFSEEA------VKM 827

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           + K         + +  +  D  +  ++IS     G  EE   +F  M+        F +
Sbjct: 828 FWK---------MQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKE------YFGI 872

Query: 361 ISTLSSCASLGWIM--LGQQIHGEGL--KLGLDSDVSVSNALL---SLYADAGYLSRCLK 413
             TL   A    ++   GQ  H E +  K+  + +  V  +LL    L  DA    RC +
Sbjct: 873 SPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQ 932

Query: 414 VFFLMPEHDQVS 425
               +  H+  +
Sbjct: 933 RILELDPHNSAA 944



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 115/289 (39%), Gaps = 65/289 (22%)

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRI 612
           + R   L  +T   +L +C     L +G   H     A LE  + +G+ L++MY +CG +
Sbjct: 19  VDRAADLQEYT--ALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSL 76

Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD-GPLPDHVTFVGVLSA 671
           + A   F  M  RNV SW ++IS  A+ G   +A  LF  M L+    P+  T V +L+A
Sbjct: 77  EEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNA 136

Query: 672 CS-----------HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL-DKIEE 719
           C+           HA + + G +   + + + G        + M+++  + G L D I  
Sbjct: 137 CANSRDLAIGRSIHAMIWELGLERASTTATLVG--------NAMINMYAKCGSLEDAIAV 188

Query: 720 FIN----------------------------------KMPITPNSLIWRTVLGACC--RA 743
           F+                                     P+ PN + + T LGAC   R 
Sbjct: 189 FLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD 248

Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAM 792
                 L  + A++ F+    NA     L NMY   G WE      KAM
Sbjct: 249 GTWLHSLLHE-ASLGFDPLASNA-----LINMYGKCGDWEGAYSVFKAM 291


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 261/668 (39%), Positives = 403/668 (60%), Gaps = 17/668 (2%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GKE+HG++++ GL   V VGN L+ MY +C  ++ +R VF  M+ +D VSW+TMI  L +
Sbjct: 113 GKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSR 172

Query: 335 NGCYEEAI-----MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
           N  ++ A+     MNF  +R      S  +++S ++  A    + +G+ +H   ++   +
Sbjct: 173 NKEFDMALELIREMNFMQVR-----PSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNN 227

Query: 390 SDVSV--SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
             + V  + ALL +YA  G+L    ++F  + +   VSW ++I     S  L  E  K +
Sbjct: 228 EHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRL-EEGTKLF 286

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
           + M+     PN +T ++++         +LG Q+HA +++   +    +  AL+  YGKC
Sbjct: 287 IRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKC 346

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
            ++ +   +F   ++ RD + W +M+S Y     + +A NL   M   G R    T  ++
Sbjct: 347 SDIRNARALFDS-TQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSL 405

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           LS CA    L+ G  VH+   +  +E D ++ +ALVDMY+KCG I+ A R F     R++
Sbjct: 406 LSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDI 465

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
             WN++I+G+A HG+G++AL +F++M+  G  P+ +TF+G+L ACSHAGLV EG K F+ 
Sbjct: 466 CMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEK 525

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           M   +GL+PQ+E + CMVDLLGRAG LD+  E I  MPI PN+++W  ++ A CR + + 
Sbjct: 526 MVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA-CRLH-KN 583

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
            +LG  AA  L E+EP+N    VL++N+YA+  +W D A  RK MK   +KKE G S + 
Sbjct: 584 PQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIE 643

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
           +   VH F+ GD+SHP+   I E L E+ +K+ +AGYVP T   L +++ E KE  ++YH
Sbjct: 644 VNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYH 703

Query: 868 SEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SEK+A+AF +++     PIRI+KNLRVC DCH+A K +SKI GR I++RD NRFHHF +G
Sbjct: 704 SEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREG 763

Query: 927 KCSCGDYW 934
            CSCGDYW
Sbjct: 764 YCSCGDYW 771



 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 118/489 (24%), Positives = 227/489 (46%), Gaps = 54/489 (11%)

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           SVL+AC +   S  + G ++H  VLK     D  V N L+ MYG C    + AR +F+++
Sbjct: 99  SVLKACGQV--SWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGEC-ACVEYARLVFDKM 155

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSSV 208
             RD++SW+++I   S+  +    F +   + RE     ++P+E    S++   A  +++
Sbjct: 156 MERDVVSWSTMIRSLSRNKE----FDMALELIREMNFMQVRPSEVAMVSMVNLFADTANM 211

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
             G  +   ++       +   +   +AL+  +A+ G+   AR++F  + QK VVS   +
Sbjct: 212 RMGKAMHAYVIRNSNNEHM--GVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAM 269

Query: 269 MEG-----------------------------------------RRKGKEVHGYLIRSGL 287
           + G                                          + GK++H Y++R+G 
Sbjct: 270 IAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGF 329

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
              +A+   LV+MY KC  I ++R++F     +D + W  M+S   Q  C ++A   F  
Sbjct: 330 SVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQ 389

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           MR  G+  +  +++S LS CA  G + LG+ +H    K  ++ D  ++ AL+ +YA  G 
Sbjct: 390 MRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGD 449

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           ++   ++F      D   WN++I  FA       EA+  + +M R G  PN +TFI +L 
Sbjct: 450 INAAGRLFIEAISRDICMWNAIITGFA-MHGYGEEALDIFAEMERQGVKPNDITFIGLLH 508

Query: 468 AASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           A S   +   G ++  +++  + +  +      ++   G+ G +D+  ++   M  + + 
Sbjct: 509 ACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNT 568

Query: 527 VSWNSMISG 535
           + W ++++ 
Sbjct: 569 IVWGALVAA 577



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 117/481 (24%), Positives = 225/481 (46%), Gaps = 55/481 (11%)

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
           +S + L ++I   V K GL  D++VG+AL+  +       YAR +F++M++++VVS + +
Sbjct: 107 VSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTM 166

Query: 269 ----------------------MEGR-------------------RKGKEVHGYLIRSGL 287
                                 M+ R                   R GK +H Y+IR+  
Sbjct: 167 IRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSN 226

Query: 288 FDMVAVG--NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
            + + V     L++MYAKCG +  +R +F  +  K  VSW  MI+G  ++   EE    F
Sbjct: 227 NEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLF 286

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             M+ + +  +  +++S +  C   G + LG+Q+H   L+ G    ++++ AL+ +Y   
Sbjct: 287 IRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKC 346

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
             +     +F      D + W +++ A+A +   + +A   +  MR +G  P  VT +++
Sbjct: 347 SDIRNARALFDSTQNRDVMIWTAMLSAYAQANC-IDQAFNLFDQMRTSGVRPTKVTIVSL 405

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           L+  +      LG  VH+ + K  V  +  +  AL+  Y KCG+++   ++F   +  RD
Sbjct: 406 LSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIE-AISRD 464

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME--- 582
              WN++I+G+  +    +A+++   M ++G + +  TF  +L AC+    +  G +   
Sbjct: 465 ICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFE 524

Query: 583 --VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYAR 639
             VH  G+   +E        +VD+  + G +D A      MP++ N   W ++++    
Sbjct: 525 KMVHTFGLVPQIEHY----GCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRL 580

Query: 640 H 640
           H
Sbjct: 581 H 581



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 122/517 (23%), Positives = 224/517 (43%), Gaps = 59/517 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  +LK G   DVF+ N L+ +Y     +  A  +FD+M +R+ VSW+ ++   +  
Sbjct: 114 KEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRN 173

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLK-SNQTFDG 123
              + A ++ +EM       +  A+ S++    +   +  + G  +H  V++ SN    G
Sbjct: 174 KEFDMALELIREMNFMQVRPSEVAMVSMVNLFADT--ANMRMGKAMHAYVIRNSNNEHMG 231

Query: 124 L-VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
           +  +  L+ MY  C      AR++F  +  + ++SW ++I+   +        KLF RMQ
Sbjct: 232 VPTTTALLDMYAKC-GHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQ 290

Query: 183 REGFRYSLKPNEYTFGSLIT-AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            E    ++ PNE T  SLI    ++  L    L +Q+ A + + G    L + +ALV  +
Sbjct: 291 EE----NIFPNEITMLSLIVECGFTGALQ---LGKQLHAYILRNGFSVSLALATALVDMY 343

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------- 274
            +  +   AR +F+    ++V+    ++    +                           
Sbjct: 344 GKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIV 403

Query: 275 --------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                         GK VH Y+ +  +     +   LV+MYAKCG I+ +  +F   I +
Sbjct: 404 SLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISR 463

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D   WN +I+G   +G  EEA+  F  M R G+  ++ + I  L +C+  G +  G+++ 
Sbjct: 464 DICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLF 523

Query: 381 GEGL-KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA--FADS 436
            + +   GL   +     ++ L   AG L    ++   MP + + + W +++ A     +
Sbjct: 524 EKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKN 583

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
             L   A    L++       N V   NI AAA+ +S
Sbjct: 584 PQLGELAATQLLEIEPENCGYN-VLMSNIYAAANRWS 619



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 147/321 (45%), Gaps = 18/321 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  IL++GF+  + L   L+++Y +  D+ +A  LFD   +R+ + W  ++S Y   
Sbjct: 318 KQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQA 377

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
              ++A  +F +M  +G    +  + S+L  C   G      G  VH  + K     D +
Sbjct: 378 NCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAG--ALDLGKWVHSYIDKERVEVDCI 435

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           ++  L+ MY  C +  + A R+F E  +RD+  WN+II+ ++  G       +F+ M+R+
Sbjct: 436 LNTALVDMYAKCGD-INAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQ 494

Query: 185 GFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           G    +KPN+ TF  L+ A   +  V  G  L ++   MV   GL+  +     +V    
Sbjct: 495 G----VKPNDITFIGLLHACSHAGLVTEGKKLFEK---MVHTFGLVPQIEHYGCMVDLLG 547

Query: 243 RLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG---- 296
           R G    A ++ + M I+ N +    L+   R  K    G L  + L ++     G    
Sbjct: 548 RAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVL 607

Query: 297 LVNMYAKCGTIDDSRSVFRFM 317
           + N+YA      D+  V + M
Sbjct: 608 MSNIYAAANRWSDAAGVRKTM 628



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 17/211 (8%)

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
           +F   +VL AC  V+  + G E+H   ++  L+ DV +G+AL+ MY +C  ++YA   FD
Sbjct: 94  NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL-----SACSHA 675
            M  R+V SW++MI   +R+   D AL L  +M      P  V  V ++     +A    
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI-WR 734
           G     +    S ++  G +P     + ++D+  + G L    +  N +  T  +++ W 
Sbjct: 214 GKAMHAYVIRNSNNEHMG-VPTT---TALLDMYAKCGHLGLARQLFNGL--TQKTVVSWT 267

Query: 735 TVLGACCRANCRKTELGRKAANMLFEMEPQN 765
            ++  C R+N  + E G K   +   M+ +N
Sbjct: 268 AMIAGCIRSN--RLEEGTK---LFIRMQEEN 293


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 287/873 (32%), Positives = 479/873 (54%), Gaps = 59/873 (6%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G Q+H L+LKS+      ++  L+ MYG C    D A ++F+E+  R + SWN+++  + 
Sbjct: 65  GQQLHALLLKSH--LSAFLATKLVLMYGKCGSLRD-AVKVFDEMSERTIFSWNALMGAFV 121

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
             G  +   +L+  M+  G    +  +  TF S++ A     L  S L  +I  +  K G
Sbjct: 122 SSGKYLEAIELYKDMRVLG----VAIDACTFPSVLKAC--GALGESRLGAEIHGVAVKCG 175

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFE--QMIQKNVVSMNGLMEGR------------ 272
               ++V +AL++ + + G+   AR +F+   M +++ VS N ++               
Sbjct: 176 YGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSL 235

Query: 273 -RKGKEV----------------------------HGYLIRSGLFDMVAVGNGLVNMYAK 303
            R+ +EV                            HG +++S  F  V V N L+ MYAK
Sbjct: 236 FRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAK 295

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           CG ++D+  VF  M+ +D VSWNT++SGL QN  Y +A+  F  M+  G      S+++ 
Sbjct: 296 CGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNL 355

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           +++    G ++ G+++H   ++ GLDS++ + N L+ +YA    +      F  M E D 
Sbjct: 356 IAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDL 415

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           +SW ++I  +A +E  + EA+  +  ++  G   + +   ++L A S         ++H 
Sbjct: 416 ISWTTIIAGYAQNEFHL-EAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHG 474

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
            V K ++A +  ++NA+++ YG+ G +D   + F  +   +D VSW SMI+  +HN L  
Sbjct: 475 YVFKRDLA-DIMLQNAIVNVYGEVGHIDYARRAFESI-RSKDIVSWTSMITCCVHNGLPV 532

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +A+ L + + Q   + D     + LSA A++++L++G E+H   +R     +  I S+LV
Sbjct: 533 EALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLV 592

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           DMY+ CG ++ + + F  +  R++  W SMI+    HG G+KA+ LF +M     +PDH+
Sbjct: 593 DMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHI 652

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TF+ +L ACSH+GL+ EG + F+ M   Y L P  E ++CMVDLL R+  L++   F+  
Sbjct: 653 TFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRN 712

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           MPI P+S IW  +LGAC   + +  ELG  AA  L + + +N+  Y L++N++A+ G+W 
Sbjct: 713 MPIKPSSEIWCALLGACHIHSNK--ELGELAAKELLQSDTENSGKYALISNIFAADGRWN 770

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM-RDA 842
           DV + R  MK   +KK  GCSW+ + + +H F+A D+SHP+ D IY KL +  + + +  
Sbjct: 771 DVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLEKKG 830

Query: 843 GYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAF 901
           GY+ QTKF   ++  E K  ++  HSE++A+ + L    K   IRI KNLR+C DCH+ F
Sbjct: 831 GYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLLVTPKGTCIRITKNLRICDDCHTFF 890

Query: 902 KFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           K  S++  R +V+RD+NRFHHF  G CSCGD+W
Sbjct: 891 KIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 203/690 (29%), Positives = 327/690 (47%), Gaps = 69/690 (10%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +LK   +   FL   L+ +Y + G L  A K+FDEM +R   SW  ++  +   G 
Sbjct: 68  LHALLLKSHLS--AFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGK 125

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA +++K+M   G  ++     SVL+AC   G S  + G ++H + +K        V 
Sbjct: 126 YLEAIELYKDMRVLGVAIDACTFPSVLKACGALGES--RLGAEIHGVAVKCGYGEFVFVC 183

Query: 127 NVLIAMYGSCLESTDCARRIFEEI--ETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           N LIAMYG C +    AR +F+ I  E  D +SWNSIIS +   G+ +    LF RMQ  
Sbjct: 184 NALIAMYGKCGD-LGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEV 242

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSY--LLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           G    +  N YTF     AA   V   S+  L   I   V K+   +D+YV +AL++ +A
Sbjct: 243 G----VASNTYTF----VAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYA 294

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG------------------------------- 271
           + G    A ++FE M+ ++ VS N L+ G                               
Sbjct: 295 KCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLN 354

Query: 272 ----------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                       KGKEVH Y IR+GL   + +GN LV+MYAKC  +      F  M  KD
Sbjct: 355 LIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKD 414

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            +SW T+I+G  QN  + EAI  F  ++  G+      + S L +C+ L      ++IHG
Sbjct: 415 LISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHG 474

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
              K  L +D+ + NA++++Y + G++    + F  +   D VSW S+I     +  L  
Sbjct: 475 YVFKRDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHN-GLPV 532

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           EA++ +  +++    P+ +  I+ L+A ++ S  K G ++H  +I+     E  I ++L+
Sbjct: 533 EALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLV 592

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
             Y  CG +++  K+F  + ++RD + W SMI+    +    KA+ L   M  +    DH
Sbjct: 593 DMYACCGTVENSRKMFHSV-KQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDH 651

Query: 562 FTFATVLSACASVATLERG---MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
            TF  +L AC+    +  G    E+   G +  LE      + +VD+ S+   ++ A  F
Sbjct: 652 ITFLALLYACSHSGLMVEGKRFFEIMKYGYQ--LEPWPEHYACMVDLLSRSNSLEEAYHF 709

Query: 619 FDLMPVRNVYS-WNSMISGYARHGHGDKAL 647
              MP++     W +++   A H H +K L
Sbjct: 710 VRNMPIKPSSEIWCALLG--ACHIHSNKEL 737



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 133/262 (50%), Gaps = 14/262 (5%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H   +++G   ++ + NTL+++Y +   +      F+ M +++ +SW  I++GY  
Sbjct: 368 GKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQ 427

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                EA  +F+++   G  ++   +GSVLRAC   G     F  ++H  V K +   D 
Sbjct: 428 NEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACS--GLKSRNFIREIHGYVFKRDLA-DI 484

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           ++ N ++ +YG  +   D ARR FE I ++D++SW S+I+     G  +   +LF  +++
Sbjct: 485 MLQNAIVNVYGE-VGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQ 543

Query: 184 EGFRYSLKPNEYTFGSLI--TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
                +++P+     S +  TA  SS+  G    ++I   + + G   +  + S+LV  +
Sbjct: 544 T----NIQPDSIAIISALSATANLSSLKKG----KEIHGFLIRKGFFLEGPIASSLVDMY 595

Query: 242 ARLGNFYYARKIFEQMIQKNVV 263
           A  G    +RK+F  + Q++++
Sbjct: 596 ACCGTVENSRKMFHSVKQRDLI 617



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 22/99 (22%), Positives = 49/99 (49%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  +++ GF  +  + ++L+++Y   G + ++ K+F  +  R+ + W  +++  
Sbjct: 567 KKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINAN 626

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G  N+A  +FK+M     + +     ++L AC   G
Sbjct: 627 GMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSG 665


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 270/666 (40%), Positives = 397/666 (59%), Gaps = 11/666 (1%)

Query: 275 GKEVHGYLIRSGLFDMVA-VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           G+ VH +++R+    + + + N LVNMY+K    + ++ V      +  V+W ++ISG  
Sbjct: 26  GRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCV 85

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            N  +  A+++F  MRR+ ++ ++F+      + ASL   + G+Q+H   LK G   DV 
Sbjct: 86  HNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVF 145

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI-GAFADSEALVSEAVKYYLDMRR 452
           V  +   +Y+  G       +F  MP  +  +WN+ +  A  D   L  +A+  +     
Sbjct: 146 VGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCL--DAIAAFKKFLC 203

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
               PN +TF   L A +     +LG Q+H  +++     + ++ N L+  YGKCG++  
Sbjct: 204 VDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVS 263

Query: 513 CEKIFARM-SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
            E +F+R+ S RR+ VSW S+++  + N    +A  +V+   ++      F  ++VLSAC
Sbjct: 264 SELVFSRIGSGRRNVVSWCSLLAALVQNHEEERAC-MVFLQARKEVEPTDFMISSVLSAC 322

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           A +  LE G  VHA  ++AC+E ++ +GSALVD+Y KCG I+YA + F  MP RN+ +WN
Sbjct: 323 AELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWN 382

Query: 632 SMISGYARHGHGDKALTLFSQMKLD--GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           +MI GYA  G  D AL+LF +M     G    +VT V VLSACS AG V+ G + F+SM 
Sbjct: 383 AMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMR 442

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
             YG+ P  E ++C+VDLLGR+G +D+  EFI +MPI P   +W  +LGAC      KT+
Sbjct: 443 GRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHG--KTK 500

Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMK 809
           LG+ AA  LFE++P ++ N+V+ +NM AS G+WE+    RK M++  +KK  G SWV +K
Sbjct: 501 LGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVK 560

Query: 810 DGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSE 869
           + VHVF A D  H +   I   L +L  +M+ AGYVP    +LFDLE E K   V YHSE
Sbjct: 561 NRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEVWYHSE 620

Query: 870 KIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKC 928
           KIA+AF ++T    +PIRI KNLR+C DCHSA KFISKIVGREI++RD+NRFH F DG C
Sbjct: 621 KIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDGWC 680

Query: 929 SCGDYW 934
           SC DYW
Sbjct: 681 SCKDYW 686



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 157/649 (24%), Positives = 279/649 (42%), Gaps = 87/649 (13%)

Query: 5   KLFHLQILK-HGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD-RNSVSWACIVSGYT 62
           +  H  IL+ H      FLCN L+N+Y ++ DL ++++L   + + R  V+W  ++SG  
Sbjct: 27  RAVHAHILRTHDTPLPSFLCNHLVNMYSKL-DLPNSAQLVLSLTNPRTVVTWTSLISGCV 85

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
           H      A   F  M R   L N +    V +A           G Q+H L LK     D
Sbjct: 86  HNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMP--VTGKQLHALALKGGNILD 143

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG---DTISVFKLFS 179
             V      MY       + AR +F+E+  R+L +WN+ +S   Q G   D I+ FK F 
Sbjct: 144 VFVGCSAFDMYSKTGLRPE-ARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFL 202

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            +  E       PN  TF + + A    V     L +Q+   + ++    D+ V + L+ 
Sbjct: 203 CVDGE-------PNAITFCAFLNACADIV--SLELGRQLHGFIVRSRYREDVSVFNGLID 253

Query: 240 GFARLGNFYYARKIFEQM--IQKNVVSMNGL-----------------MEGRRK------ 274
            + + G+   +  +F ++   ++NVVS   L                 ++ R++      
Sbjct: 254 FYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKEVEPTDF 313

Query: 275 -----------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                            G+ VH   +++ + + + VG+ LV++Y KCG+I+ +  VFR M
Sbjct: 314 MISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREM 373

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD--GLMSSNFSLISTLSSCASLGWIML 375
             ++ V+WN MI G    G  + A+  F  M     G+  S  +L+S LS+C+  G +  
Sbjct: 374 PERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVER 433

Query: 376 GQQIHGEGL--KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
           G QI  E +  + G++        ++ L   +G + R  +    MP    +S W +++GA
Sbjct: 434 GLQIF-ESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGA 492

Query: 433 F----ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-IK 487
                      ++    + LD   +G   N V F N+LA+A  +    +  +    + IK
Sbjct: 493 CKMHGKTKLGKIAAEKLFELDPDDSG---NHVVFSNMLASAGRWEEATIVRKEMRDIGIK 549

Query: 488 YNVA-NETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAM 546
            NV  +   ++N +     K    +   +I A +++ R E+      +GY+     P A 
Sbjct: 550 KNVGYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMK----KAGYV-----PDA- 599

Query: 547 NLVWFMMQRGQRLDHFTFATVLSACA-SVATLERGMEVHAC-GVRACLE 593
           NL  F ++  ++     + +   A A  + TL RG+ +     +R C++
Sbjct: 600 NLSLFDLEEEEKASEVWYHSEKIALAFGLITLPRGVPIRITKNLRICID 648


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 283/756 (37%), Positives = 430/756 (56%), Gaps = 61/756 (8%)

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------------- 272
           + L++ + L++ + RLG    AR++ ++M ++N VS N L++                  
Sbjct: 41  ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA 100

Query: 273 -------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
                                    R G+ VH   I  GL   V V N LV+MY+KCG +
Sbjct: 101 RRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
            ++R VF     +D VSWN+++SG  + G  EE +  F  MRR G+  ++F+L S +  C
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC 220

Query: 368 ASLG--WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           +  G   + + + +HG  +K GLDSDV + +A++ +YA  G L     +F  + E + V 
Sbjct: 221 SGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVM 280

Query: 426 WNSVIGAFADSEALV-----SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
           +N++I  F  +E ++     SEA+  Y +++  G  P   TF ++L A +     + G Q
Sbjct: 281 FNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQ 340

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +H QVIKY    +  I +AL+  Y   G M+D  + F R S + D V+W +M+SG + NE
Sbjct: 341 IHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCF-RSSPKHDIVTWTAMVSGCVQNE 399

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
           L  KA++L    +  G + D FT ++V++ACAS+A    G ++     ++  +   V+G+
Sbjct: 400 LHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGN 459

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           + V MY++ G +D A+R F  M   +V SW+++IS +A+HG    AL  F +M     +P
Sbjct: 460 SCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVP 519

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           + +TF+GVL+ACSH GLVDEG +++++M++ YGL P ++  +C+VDLLGRAG L   E F
Sbjct: 520 NEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAF 579

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           I+      + +IWR++L A CR + R  E G+  AN + E+EP ++ +YV+L NMY   G
Sbjct: 580 ISNSIFHADPVIWRSLL-ASCRIH-RDLERGQLVANRIMELEPTSSASYVILYNMYLDAG 637

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
           +    +K R  MK+  VKKE G SW+ +K GVH FVAGD+SHPE   IY KL+E+  ++ 
Sbjct: 638 ELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIE 697

Query: 841 DAGYVPQTKFALFDLEPESKE-DLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCH 898
                   K A  D E   +E +L++ HSEK+AVA  ++      PIR+MKNLRVC DCH
Sbjct: 698 --------KLATTDTEISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCH 749

Query: 899 SAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           S  K ISK   REI+LRD  RFHHF DG CSC DYW
Sbjct: 750 STMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 179/684 (26%), Positives = 298/684 (43%), Gaps = 99/684 (14%)

Query: 17  AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKE 76
           A  +FL NTL+  Y R+G    A +L DEMP RN+VS+  ++  Y+ +G++  + +    
Sbjct: 40  AASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLAR 99

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
             RAG  ++R++  + L AC   G    + G  VH L +    +    VSN L++MY  C
Sbjct: 100 ARRAGVDVDRFSYAAALAACSRAGH--LRAGRAVHALAILDGLSSGVFVSNSLVSMYSKC 157

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
            E  + ARR+F+  E RD +SWNS++S Y + G    + ++F+ M+R G    +  N + 
Sbjct: 158 GEMGE-ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGG----MGLNSFA 212

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
            GS+I            + + +   V KAGL SD+++ SA++  +A+ G    A  +F  
Sbjct: 213 LGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRS 272

Query: 257 MIQKNVVSMNGLMEGRRK------------------------------------------ 274
           + + NVV  N ++ G  +                                          
Sbjct: 273 VQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLA 332

Query: 275 -----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
                GK++HG +I+    +   +G+ L+++Y   G ++D    FR     D V+W  M+
Sbjct: 333 GYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMV 392

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
           SG  QN  +E+A+  F      GL    F++ S +++CASL     G+QI     K G D
Sbjct: 393 SGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFD 452

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
               + N+ + +YA +G +    + F  M  HD VSW++VI   A       +A+ ++ +
Sbjct: 453 RFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQ-HGCARDALHFFDE 511

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCG 508
           M  A   PN +TF+ +L A S   +   G + +  + K Y ++        ++   G+ G
Sbjct: 512 MVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAG 571

Query: 509 EMDDCEKIFARMSERRDEVSWNSMI-SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
            + D E   +      D V W S++ S  IH +L            +RGQ + +      
Sbjct: 572 RLADAEAFISNSIFHADPVIWRSLLASCRIHRDL------------ERGQLVANRIMELE 619

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
            ++ AS                            L +MY   G +  AS+  DLM  R V
Sbjct: 620 PTSSASYVI-------------------------LYNMYLDAGELSLASKTRDLMKQRGV 654

Query: 628 -----YSWNSMISGYARHGHGDKA 646
                 SW  +  G      GDK+
Sbjct: 655 KKEPGLSWIELKCGVHSFVAGDKS 678



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 213/485 (43%), Gaps = 66/485 (13%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H   +  G +  VF+ N+L+++Y + G++  A ++FD   +R+ VSW  +VSGY
Sbjct: 126 RAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGY 185

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   E  ++F  M R G  LN +ALGSV++ C   G         VH  V+K+    
Sbjct: 186 VRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDS 245

Query: 122 DGLVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTI------ 172
           D  + + +I MY   G+ +E    A  +F  ++  +++ +N++I+ + +    I      
Sbjct: 246 DVFLVSAMIDMYAKKGALVE----AAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVAS 301

Query: 173 SVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL--QQILAMVKKAGLLSD 230
               L+S +Q  G    ++P E+TF S++ A     L+G YL   +QI   V K     D
Sbjct: 302 EALTLYSEVQSRG----MQPTEFTFSSVLRACN---LAG-YLEFGKQIHGQVIKYTFQED 353

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG------------------- 271
            ++GSAL+  +   G      + F    + ++V+   ++ G                   
Sbjct: 354 DFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLG 413

Query: 272 ----------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
                                  R G+++  +  +SG      +GN  V+MYA+ G +D 
Sbjct: 414 AGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDA 473

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +   F+ M   D VSW+ +IS   Q+GC  +A+  F  M    ++ +  + +  L++C+ 
Sbjct: 474 ATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSH 533

Query: 370 LGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH-DQVSWN 427
            G +  G + +    K  GL   +     ++ L   AG L+           H D V W 
Sbjct: 534 GGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWR 593

Query: 428 SVIGA 432
           S++ +
Sbjct: 594 SLLAS 598



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 135/309 (43%), Gaps = 14/309 (4%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q++K+ F  D F+ + LI++Y   G +    + F   P  + V+W  +VSG    
Sbjct: 339 KQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQN 398

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            +  +A  +F E + AG   + + + SV+ AC     +  + G Q+ C   KS      +
Sbjct: 399 ELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVA--RAGEQIQCFATKSGFDRFTV 456

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           + N  + MY    +  D A R F+E+E+ D++SW+++IS ++Q G        F  M   
Sbjct: 457 MGNSCVHMYARSGD-VDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEM--- 512

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                + PNE TF  ++TA     L     L+    M K  GL   +   + +V    R 
Sbjct: 513 -VDAKVVPNEITFLGVLTACSHGGLVDEG-LRYYETMTKDYGLSPTIKHCTCVVDLLGRA 570

Query: 245 GNFYYARK-IFEQMIQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LV 298
           G    A   I   +   + V    L+   R  +++  G L+ + + ++    +     L 
Sbjct: 571 GRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILY 630

Query: 299 NMYAKCGTI 307
           NMY   G +
Sbjct: 631 NMYLDAGEL 639


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 284/763 (37%), Positives = 442/763 (57%), Gaps = 50/763 (6%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM-----E 270
           +Q+ A++   G   D+ + + LV+ +A LG+   +   F+ + +KN+ S N ++      
Sbjct: 68  KQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRR 127

Query: 271 GRRK----------------------------------GKEVHGYLIRSGLFDMVAVGNG 296
           GR +                                  G+++H ++++ G    V V   
Sbjct: 128 GRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMHCWVLKMGFEHDVYVAAS 187

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           L+++Y++ G ++ +  VF  M  +D  SWN MISG  QNG   EA+     M+ + +   
Sbjct: 188 LIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMD 247

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
             ++ S L  CA    ++ G  +H   +K GL+SDV VSNAL+++Y+  G L    +VF 
Sbjct: 248 TVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFD 307

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            M   D VSWNS+I A+  ++  V+ A+ ++ +M   G  P+ +T +++ +     S  +
Sbjct: 308 GMEVRDLVSWNSIIAAYEQNDDPVT-ALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRR 366

Query: 477 LGHQVHAQVIKYN-VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           +G  VH  V++   +  +  I NAL++ Y K G +D    +F ++  R D +SWN++I+G
Sbjct: 367 IGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSR-DVISWNTLITG 425

Query: 536 YIHNELLPKAMNLVWFMMQRGQRL--DHFTFATVLSACASVATLERGMEVHACGVRACLE 593
           Y  N L  +A++  + MM+ G+ +  +  T+ ++L A + V  L++GM++H   ++ CL 
Sbjct: 426 YAQNGLASEAID-AYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLF 484

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
            DV + + L+DMY KCGR++ A   F  +P      WN++IS    HGHG+KAL LF  M
Sbjct: 485 LDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDM 544

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGE 713
           + DG   DH+TFV +LSACSH+GLVDE    F +M + Y + P L+ + CMVDL GRAG 
Sbjct: 545 RADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGY 604

Query: 714 LDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLL 772
           L+K    ++ MPI  ++ IW T+L AC    N    ELG  A++ L E++ +N   YVLL
Sbjct: 605 LEKAYNLVSNMPIQADASIWGTLLAACRIHGN---AELGTFASDRLLEVDSENVGYYVLL 661

Query: 773 ANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKL 832
           +N+YA+ GKWE   K R   ++  ++K  G S V +   V VF AG++SHP+   IYE+L
Sbjct: 662 SNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEEL 721

Query: 833 KELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNL 891
           + LN KM+  GYVP   F L D+E + KE++++ HSE++A+ F +++   K PIRI KNL
Sbjct: 722 RVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFKNL 781

Query: 892 RVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           RVCGDCH+A K+ISKI  REI++RDSNRFHHF DG CSCGDYW
Sbjct: 782 RVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 156/578 (26%), Positives = 277/578 (47%), Gaps = 60/578 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  +L  G A DV L   L+ +Y  +GDL+ +S  F  +  +N  SW  +VS Y  
Sbjct: 67  AKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVR 126

Query: 64  KGMSNEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
           +G   ++     E++  +G   + Y    VL+AC          G ++HC VLK     D
Sbjct: 127 RGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD-----GEKMHCWVLKMGFEHD 181

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V+  LI +Y S   + + A ++F ++  RD+ SWN++IS + Q G+     ++  RM+
Sbjct: 182 VYVAASLIHLY-SRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMK 240

Query: 183 REGFRYSLKPNEYTFGSLIT-AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            E     +K +  T  S++   A S+ + G  L+      V K GL SD++V +AL++ +
Sbjct: 241 TE----EVKMDTVTVSSMLPICAQSNDVVGGVLVH---LYVIKHGLESDVFVSNALINMY 293

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMN----------------------------------- 266
           ++ G    A+++F+ M  +++VS N                                   
Sbjct: 294 SKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVV 353

Query: 267 ------GLMEGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                 G +  RR G+ VHG+++R    ++ + +GN LVNMYAK G+ID +R+VF  +  
Sbjct: 354 SLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPS 413

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF-SLISTLSSCASLGWIMLGQQ 378
           +D +SWNT+I+G  QNG   EAI  +  M     +  N  + +S L + + +G +  G +
Sbjct: 414 RDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMK 473

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           IHG  +K  L  DV V+  L+ +Y   G L   + +F+ +P+   V WN++I +      
Sbjct: 474 IHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLG-IHG 532

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIE 497
              +A++ + DMR  G   + +TF+++L+A S   +          + K Y +       
Sbjct: 533 HGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHY 592

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             ++  +G+ G ++    + + M  + D   W ++++ 
Sbjct: 593 GCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAA 630



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 152/504 (30%), Positives = 242/504 (48%), Gaps = 67/504 (13%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D +  H  +LK GF +DV++  +LI++Y R G +  A K+F +MP R+  SW  ++SG+ 
Sbjct: 165 DGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFC 224

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G   EA ++   M      ++   + S+L  C +   +    G+ VH  V+K     D
Sbjct: 225 QNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQS--NDVVGGVLVHLYVIKHGLESD 282

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             VSN LI MY       D A+R+F+ +E RDL+SWNSII+ Y Q  D ++    F  M 
Sbjct: 283 VFVSNALINMYSKFGRLQD-AQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEML 341

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLS-DLYVGSALVSGF 241
             G R    P+  T  SL  A+    LS   + + +   V +   L  D+ +G+ALV+ +
Sbjct: 342 FVGMR----PDLLTVVSL--ASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMY 395

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLM--------------------EGR--------- 272
           A+LG+   AR +FEQ+  ++V+S N L+                    EGR         
Sbjct: 396 AKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTW 455

Query: 273 -------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                        ++G ++HG LI++ LF  V V   L++MY KCG ++D+ S+F  +  
Sbjct: 456 VSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQ 515

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           + SV WN +IS L  +G  E+A+  F  MR DG+ + + + +S LS+C+  G +   Q  
Sbjct: 516 ETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWC 575

Query: 380 HGEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSW----------- 426
                K   +  ++     ++ L+  AGYL +   +   MP + D   W           
Sbjct: 576 FDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHG 635

Query: 427 NSVIGAFADSEALV--SEAVKYYL 448
           N+ +G FA    L   SE V YY+
Sbjct: 636 NAELGTFASDRLLEVDSENVGYYV 659



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 165/320 (51%), Gaps = 21/320 (6%)

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
           +F+L+    SC +   I + +Q+H   L LG   DV +   L++LYA  G LS     F 
Sbjct: 53  DFNLV--FRSCTN---INVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFK 107

Query: 417 LMPEHDQVSWNSVIGAFA------DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
            +   +  SWNS++ A+       DS   V+E +        +G  P+  TF  +L A  
Sbjct: 108 HIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSL------SGVRPDFYTFPPVLKACL 161

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
           S + G+   ++H  V+K    ++  +  +L+  Y + G ++   K+F  M   RD  SWN
Sbjct: 162 SLADGE---KMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPV-RDVGSWN 217

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           +MISG+  N  + +A+ ++  M     ++D  T +++L  CA    +  G+ VH   ++ 
Sbjct: 218 AMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKH 277

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
            LE DV + +AL++MYSK GR+  A R FD M VR++ SWNS+I+ Y ++     AL  F
Sbjct: 278 GLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFF 337

Query: 651 SQMKLDGPLPDHVTFVGVLS 670
            +M   G  PD +T V + S
Sbjct: 338 KEMLFVGMRPDLLTVVSLAS 357



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 204/437 (46%), Gaps = 56/437 (12%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           L HL ++KHG   DVF+ N LIN+Y + G L  A ++FD M  R+ VSW  I++ Y    
Sbjct: 269 LVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQND 328

Query: 66  MSNEACKMFKEMVRAGF---LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-TF 121
               A   FKEM+  G    LL   +L S+         S  + G  VH  V++      
Sbjct: 329 DPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQL-----SDRRIGRAVHGFVVRCRWLEV 383

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D ++ N L+ MY   L S DCAR +FE++ +RD+ISWN++I+ Y+Q G        ++ M
Sbjct: 384 DIVIGNALVNMYAK-LGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMM 442

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVGSALV 238
           + EG   ++ PN+ T+ S++  AYS V +    LQQ   I   + K  L  D++V + L+
Sbjct: 443 E-EG--RTIVPNQGTWVSIL-PAYSHVGA----LQQGMKIHGRLIKNCLFLDVFVATCLI 494

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN--- 295
             + + G    A  +F ++ Q+  V  N ++     G   HG        DM A G    
Sbjct: 495 DMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSL--GIHGHGEKALQLFKDMRADGVKAD 552

Query: 296 --GLVNMYAKC---GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
               V++ + C   G +D+++  F  M  +  +  N     L   GC  +         R
Sbjct: 553 HITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPN-----LKHYGCMVD------LFGR 601

Query: 351 DGLMSSNFSLISTL---SSCASLGWIMLGQQIHGEGLKLG---------LDSDVSVSNAL 398
            G +   ++L+S +   +  +  G ++   +IHG   +LG         +DS+      L
Sbjct: 602 AGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNA-ELGTFASDRLLEVDSENVGYYVL 660

Query: 399 LS-LYADAGYLSRCLKV 414
           LS +YA+ G     +KV
Sbjct: 661 LSNIYANVGKWEGAVKV 677



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 153/303 (50%), Gaps = 10/303 (3%)

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY 536
           +  Q+HA ++    A +  +   L++ Y   G++      F  + +R++  SWNSM+S Y
Sbjct: 66  VAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHI-QRKNIFSWNSMVSAY 124

Query: 537 IHNELLPKAMNLVWFMMQ-RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
           +       +M+ V  ++   G R D +TF  VL AC S+A    G ++H   ++   E D
Sbjct: 125 VRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKMGFEHD 181

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
           V + ++L+ +YS+ G ++ A + F  MPVR+V SWN+MISG+ ++G+  +AL +  +MK 
Sbjct: 182 VYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKT 241

Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEG-FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
           +    D VT   +L  C+ +  V  G   H   +   +GL   +   + ++++  + G L
Sbjct: 242 EEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIK--HGLESDVFVSNALINMYSKFGRL 299

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
              +   + M +  + + W +++ A  + +   T LG     +   M P + +  V LA+
Sbjct: 300 QDAQRVFDGMEVR-DLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRP-DLLTVVSLAS 357

Query: 775 MYA 777
           ++ 
Sbjct: 358 IFG 360


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 307/919 (33%), Positives = 489/919 (53%), Gaps = 56/919 (6%)

Query: 46  MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG-PSGF 104
           MP R S SW   VSG    G+ + A  + + M      L+ +AL S++ AC+  G   G 
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 105 KFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISV 164
             G  +H L  ++    +  +   L+ +YGS     + A+R+F E+  R+++SW +I+  
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLN-AQRLFWEMPQRNVVSWTAIMVA 119

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
            S  G        + RM++EG    +  N     ++++      L       Q+ A V  
Sbjct: 120 LSSNGCMEEALVAYRRMRKEG----VMCNANALATVVS--LCGALEDEVAGLQVTAHVVV 173

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM--------------- 269
           +GLL+ + V ++L++ F  L     A ++F++M +++ +S N ++               
Sbjct: 174 SGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIV 233

Query: 270 -----EGRRK---------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
                 G  K                     G  +H   + SGL   V + N LVNMY+ 
Sbjct: 234 LSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYST 293

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ-NGCYEEAIMNFCAMRRDGLMSSNFSLIS 362
            G +D++ S+FR M  +D +SWNTMIS   Q N C E        ++ D    ++ +  S
Sbjct: 294 AGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSS 353

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
            L +C+S   +M G+ IH   L+  L + + + N+LL++Y+    +    +VF  MP +D
Sbjct: 354 ALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYD 413

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF-SMGKLGHQV 481
            VS N + G +A  E  V+ A++ +  MR  G  PN +T IN+     S   +   G  +
Sbjct: 414 VVSCNVLTGGYAALED-VANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPL 472

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           HA V +  + ++  I N+L++ Y  CG+++    IF+R++ +   +SWN++I+  + +  
Sbjct: 473 HAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNK-SVISWNAIIAANVRHGR 531

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +A+ L       G +LD F  A  LS+ A++A+LE GM++H   V+  L+ D  + +A
Sbjct: 532 GEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNA 591

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
            +DMY KCG++D   +       R    WN++ISGYAR+G+  +A   F  M   G  PD
Sbjct: 592 TMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPD 651

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
           +VTFV +LSACSHAGL+D+G  ++ SM+  +G+ P ++   C+VDLLGR G+  + E+FI
Sbjct: 652 YVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFI 711

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
           ++MP+ PN LIWR++L +  R + +  ++GRKAA  L E++P +   YVLL+N+YA+  +
Sbjct: 712 DEMPVLPNDLIWRSLLSS-SRTH-KNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNAR 769

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           W DV K R  MK  ++ K   CSW+ +K+ V  F  GD SH   + IY KL E+  K+R+
Sbjct: 770 WVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLRE 829

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSA 900
            GYV  T  AL D + E KE  +  HSEK+A+A+ +L       IRI KNLRVC DCH  
Sbjct: 830 VGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHLV 889

Query: 901 FKFISKIVGREIVLRDSNR 919
           FK +S +  REIVLRD  R
Sbjct: 890 FKLVSMVFHREIVLRDPYR 908



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 187/691 (27%), Positives = 322/691 (46%), Gaps = 72/691 (10%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H    + G   +V++   L+++Y   G + +A +LF EMP RN VSW  I+   +  G 
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGC 125

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA   ++ M + G + N  AL +V+  C          G+QV   V+ S       V+
Sbjct: 126 MEEALVAYRRMRKEGVMCNANALATVVSLCGALEDE--VAGLQVTAHVVVSGLLTHVSVA 183

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI M+G+     D A R+F+ +E RD ISWN++IS+YS        F + S M R G 
Sbjct: 184 NSLITMFGNLRRVQD-AERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDM-RHG- 240

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              +KP+  T  SL++   SS L    L   I ++   +GL   + + +ALV+ ++  G 
Sbjct: 241 --EVKPDVTTLCSLVSVCASSDLVA--LGSGIHSLCVSSGLHCSVPLINALVNMYSTAGK 296

Query: 247 FYYARKIFEQMIQKNVVSMNGLM------------------------------------- 269
              A  +F  M +++V+S N ++                                     
Sbjct: 297 LDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALG 356

Query: 270 -----EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                E    G+ +H  +++  L +++ +GN L+ MY+KC +++D+  VF  M   D VS
Sbjct: 357 ACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVS 416

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM-LGQQIHGEG 383
            N +  G         A+  F  MR  G+  +  ++I+   +C SLG +   G  +H   
Sbjct: 417 CNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYV 476

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
            + GL SD  ++N+L+++YA  G L     +F  +     +SWN++I A         EA
Sbjct: 477 TQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANV-RHGRGEEA 535

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           +K ++D + AG   +       L+++++ +  + G Q+H   +K  +  ++ + NA +  
Sbjct: 536 IKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDM 595

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           YGKCG+MD   K     + R  +  WN++ISGY       +A +    M+  GQ+ D+ T
Sbjct: 596 YGKCGKMDCMLKTLPDPAHRPTQC-WNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVT 654

Query: 564 FATVLSACASVATLERGMEVH---------ACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
           F  +LSAC+    +++GM+ +         + G++ C+         +VD+  + G+   
Sbjct: 655 FVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCV--------CIVDLLGRLGKFAE 706

Query: 615 ASRFFDLMPV-RNVYSWNSMISGYARHGHGD 644
           A +F D MPV  N   W S++S    H + D
Sbjct: 707 AEKFIDEMPVLPNDLIWRSLLSSSRTHKNLD 737



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 118/283 (41%), Gaps = 31/283 (10%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H  IL+      + + N+L+ +Y +   +    ++F+ MP  + VS   +  GY 
Sbjct: 366 NGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYA 425

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                  A ++F  M   G   N   + ++   C+  G     +GM +H  V ++    D
Sbjct: 426 ALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLG-DLHSYGMPLHAYVTQTGLLSD 484

Query: 123 GLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
             ++N LI MY +C  LES+     IF  I  + +ISWN+II+   + G      KLF  
Sbjct: 485 EYITNSLITMYATCGDLESST---GIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMD 541

Query: 181 MQREGF---RYSLKPNEYTFGSLITAAYSSVLSG----------SYLLQQILAMVKKAG- 226
            Q  G    R+ L     +  +L +      L G          S+++   + M  K G 
Sbjct: 542 SQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGK 601

Query: 227 ---LLSDL--------YVGSALVSGFARLGNFYYARKIFEQMI 258
              +L  L           + L+SG+AR G F  A   F+ M+
Sbjct: 602 MDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMV 644


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 281/763 (36%), Positives = 425/763 (55%), Gaps = 49/763 (6%)

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--- 271
           L+ IL ++ K GL  +    + LVS F R G+   A ++FE + +K  V    +++G   
Sbjct: 53  LRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAK 112

Query: 272 --------------------------------------RRKGKEVHGYLIRSGL-FDMVA 292
                                                  R GKE+HG L++SG   D+ A
Sbjct: 113 VSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFA 172

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           +  GL NMYAKC  + ++R VF  M  +D VSWNT+++G  QNG    A+     M  + 
Sbjct: 173 M-TGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEEN 231

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
           L  S  +++S L + ++L  I +G++IHG  ++ G DS V+++ AL+ +YA  G L    
Sbjct: 232 LKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTAR 291

Query: 413 KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
            +F  M E + VSWNS+I A+  +E    EA+  +  M   G  P  V+ +  L A +  
Sbjct: 292 LLFDGMLERNVVSWNSMIDAYVQNEN-PKEAMVIFQKMLDEGVKPTDVSVMGALHACADL 350

Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
              + G  +H   ++  +    ++ N+L+S Y KC E+D    +F ++ + R  VSWN+M
Sbjct: 351 GDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKL-QSRTIVSWNAM 409

Query: 533 ISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL 592
           I G+  N    +A+N    M  R  + D FT+ +V++A A ++       +H   +R CL
Sbjct: 410 ILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCL 469

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
           + +V + +ALVDMY+KCG I  A   FD+M  R+V +WN+MI GY  HG G  AL LF +
Sbjct: 470 DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEE 529

Query: 653 MKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG 712
           M+     P+ VTF+ V+SACSH+GLV+ G K F  M + Y + P ++ +  MVDLLGRAG
Sbjct: 530 MQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAG 589

Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLL 772
            L++  +FI +MP+ P   ++  +LGAC     +      K A  LFE+ P++   +VLL
Sbjct: 590 RLNEAWDFIMQMPVKPAVNVYGAMLGAC--QIHKNVNFAEKVAERLFELNPEDGGYHVLL 647

Query: 773 ANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKL 832
           AN+Y +   WE V + R +M    ++K  GCS V +K+ VH F +G  +HP    IY  L
Sbjct: 648 ANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFL 707

Query: 833 KELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNL 891
           ++L  ++++AGYVP T   L  LE + KE L+S HSEK+A++F +L   +   I + KNL
Sbjct: 708 EKLICQIKEAGYVPDTNLIL-GLEDDVKEQLLSSHSEKLAISFGLLNTTAGTTIHVRKNL 766

Query: 892 RVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           RVC DCH+A K+IS + GREI++RD  RFHHF +G CSCGDYW
Sbjct: 767 RVCADCHNATKYISLVTGREIIVRDMQRFHHFKNGACSCGDYW 809



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 167/595 (28%), Positives = 286/595 (48%), Gaps = 70/595 (11%)

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGM-QVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           A  LL R    S L+  +   P  FK G+ Q H    K       LVS  L   YGS   
Sbjct: 40  AALLLER---CSSLKELRHILPLIFKNGLYQEHLFQTK-------LVS--LFCRYGS--- 84

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             D A R+FE I+ +  + + +++  +++  D     K F RM+ +     ++P  Y F 
Sbjct: 85  -VDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDD----EVEPVVYNFT 139

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
            L+        +   + ++I  ++ K+G   DL+  + L + +A+    + ARK+F++M 
Sbjct: 140 YLLKVCGDE--AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMP 197

Query: 259 QKNVVSMNGLMEGR-----------------------------------------RKGKE 277
           ++++VS N ++ G                                          R GKE
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKE 257

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +HGY +R+G   +V +   LV+MYAKCG++  +R +F  M+ ++ VSWN+MI    QN  
Sbjct: 258 IHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNEN 317

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
            +EA++ F  M  +G+  ++ S++  L +CA LG +  G+ IH   ++L LD +VSV N+
Sbjct: 318 PKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNS 377

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+S+Y     +     +F  +     VSWN++I  FA +   + EA+ Y+  M+     P
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPI-EALNYFSQMQARTVKP 436

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           +  T+++++ A +  S+      +H  V++  +     +  AL+  Y KCG +     IF
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIF 496

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
             MSER    +WN+MI GY  + +   A+ L   M +   R +  TF +V+SAC+    +
Sbjct: 497 DMMSERH-VTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLV 555

Query: 578 ERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR---NVY 628
           E G++  H       +E  +    A+VD+  + GR++ A  F   MPV+   NVY
Sbjct: 556 EAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVY 610



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 209/471 (44%), Gaps = 52/471 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  ++K GF+ D+F    L N+Y +   +  A K+FD MP+R+ VSW  IV+GY+  
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQN 214

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           GM+  A +M   M       +   + SVL A         + G ++H   +++   FD L
Sbjct: 215 GMARMALEMVNLMCEENLKPSFITIVSVLPAVSAL--RLIRIGKEIHGYAMRAG--FDSL 270

Query: 125 V--SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
           V  +  L+ MY  C  S   AR +F+ +  R+++SWNS+I  Y Q  +      +F +M 
Sbjct: 271 VNIATALVDMYAKC-GSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKML 329

Query: 183 REGFRYSLKPNEYT----------FGSLITAAYSSVLSGSYLLQQILAMVKKA------- 225
            EG    +KP + +           G L    +   LS    L + +++V          
Sbjct: 330 DEG----VKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKC 385

Query: 226 ----------GLLSDLYVGS--ALVSGFARLGNFYYARKIFEQMIQK----------NVV 263
                     G L    + S  A++ GFA+ G    A   F QM  +          +V+
Sbjct: 386 KEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVI 445

Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
           +    +      K +HG ++R+ L   V V   LV+MYAKCG I  +R +F  M  +   
Sbjct: 446 TAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVT 505

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IHGE 382
           +WN MI G   +G  + A+  F  M++  +  +  + +S +S+C+  G +  G +  H  
Sbjct: 506 TWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMM 565

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
                ++  +    A++ L   AG L+        MP    V+ + +++GA
Sbjct: 566 KENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGA 616



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 118/270 (43%), Gaps = 41/270 (15%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +  AK  H  ++++    +VF+   L+++Y + G +  A  +FD M +R+  +W  ++ G
Sbjct: 454 THHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG-------------------P 101
           Y   G+   A ++F+EM +     N     SV+ AC   G                   P
Sbjct: 514 YGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEP 573

Query: 102 SGFKFGMQVHCL--VLKSNQTFDGLVS-------NVLIAMYGSCL--ESTDCARRIFE-- 148
           S   +G  V  L    + N+ +D ++        NV  AM G+C   ++ + A ++ E  
Sbjct: 574 SMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERL 633

Query: 149 -EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS-------LKPNEYTFGSL 200
            E+   D      + ++Y        V ++   M R+G R +       +K   ++F S 
Sbjct: 634 FELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSG 693

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSD 230
            TA  SS    ++ L++++  +K+AG + D
Sbjct: 694 STAHPSSKKIYAF-LEKLICQIKEAGYVPD 722


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 283/756 (37%), Positives = 430/756 (56%), Gaps = 61/756 (8%)

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------------- 272
           + L++ + L++ + RLG    AR++ ++M ++N VS N L++                  
Sbjct: 41  ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA 100

Query: 273 -------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
                                    R G+ VH   I  GL   V V N LV+MY+KCG +
Sbjct: 101 RRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
            ++R VF     +D VSWN+++SG  + G  EE +  F  MRR G+  ++F+L S +  C
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC 220

Query: 368 ASLG--WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           +  G   + + + +HG  +K GLDSDV + +A++ +YA  G L     +F  + E + V 
Sbjct: 221 SGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVM 280

Query: 426 WNSVIGAFADSEALV-----SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
           +N++I  F  +E ++     SEA+  Y +++  G  P   TF ++L A +     + G Q
Sbjct: 281 FNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQ 340

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +H QVIKY    +  I +AL+  Y   G M+D  + F R S + D V+W +M+SG + NE
Sbjct: 341 IHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCF-RSSPKHDIVTWTAMVSGCVQNE 399

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
           L  KA++L    +  G + D FT ++V++ACAS+A    G ++     ++  +   V+G+
Sbjct: 400 LHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGN 459

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           + V MY++ G +D A+R F  M   +V SW+++IS +A+HG    AL  F +M     +P
Sbjct: 460 SCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVP 519

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           + +TF+GVL+ACSH GLVDEG +++++M++ YGL P ++  +C+VDLLGRAG L   E F
Sbjct: 520 NEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAF 579

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           I+      + +IWR++L A CR + R  E G+  AN + E+EP ++ +YV+L NMY   G
Sbjct: 580 ISNGIFHADPVIWRSLL-ASCRIH-RDLERGQLVANRIMELEPTSSASYVILYNMYLDAG 637

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
           +    +K R  MK+  VKKE G SW+ +K GVH FVAGD+SHPE   IY KL+E+  ++ 
Sbjct: 638 ELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIE 697

Query: 841 DAGYVPQTKFALFDLEPESKE-DLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCH 898
                   K A  D E   +E +L++ HSEK+AVA  ++      PIR+MKNLRVC DCH
Sbjct: 698 --------KLATTDTEISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCH 749

Query: 899 SAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           S  K ISK   REI+LRD  RFHHF DG CSC DYW
Sbjct: 750 STMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 179/684 (26%), Positives = 298/684 (43%), Gaps = 99/684 (14%)

Query: 17  AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKE 76
           A  +FL NTL+  Y R+G    A +L DEMP RN+VS+  ++  Y+ +G++  + +    
Sbjct: 40  AASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLAR 99

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
             RAG  ++R++  + L AC   G    + G  VH L +    +    VSN L++MY  C
Sbjct: 100 ARRAGVDVDRFSYAAALAACSRAGH--LRAGRAVHALAILDGLSSGVFVSNSLVSMYSKC 157

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
            E  + ARR+F+  E RD +SWNS++S Y + G    + ++F+ M+R G    +  N + 
Sbjct: 158 GEMGE-ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGG----MGLNSFA 212

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
            GS+I            + + +   V KAGL SD+++ SA++  +A+ G    A  +F  
Sbjct: 213 LGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRS 272

Query: 257 MIQKNVVSMNGLMEGRRK------------------------------------------ 274
           + + NVV  N ++ G  +                                          
Sbjct: 273 VQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLA 332

Query: 275 -----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
                GK++HG +I+    +   +G+ L+++Y   G ++D    FR     D V+W  M+
Sbjct: 333 GYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMV 392

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
           SG  QN  +E+A+  F      GL    F++ S +++CASL     G+QI     K G D
Sbjct: 393 SGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFD 452

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
               + N+ + +YA +G +    + F  M  HD VSW++VI   A       +A+ ++ +
Sbjct: 453 RFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQ-HGCARDALHFFDE 511

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCG 508
           M  A   PN +TF+ +L A S   +   G + +  + K Y ++        ++   G+ G
Sbjct: 512 MVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAG 571

Query: 509 EMDDCEKIFARMSERRDEVSWNSMI-SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
            + D E   +      D V W S++ S  IH +L            +RGQ + +      
Sbjct: 572 RLADAEAFISNGIFHADPVIWRSLLASCRIHRDL------------ERGQLVANRIMELE 619

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
            ++ AS                            L +MY   G +  AS+  DLM  R V
Sbjct: 620 PTSSASYVI-------------------------LYNMYLDAGELSLASKTRDLMKQRGV 654

Query: 628 -----YSWNSMISGYARHGHGDKA 646
                 SW  +  G      GDK+
Sbjct: 655 KKEPGLSWIELKCGVHSFVAGDKS 678



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 205/461 (44%), Gaps = 65/461 (14%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H   +  G +  VF+ N+L+++Y + G++  A ++FD   +R+ VSW  +VSGY
Sbjct: 126 RAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGY 185

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   E  ++F  M R G  LN +ALGSV++ C   G         VH  V+K+    
Sbjct: 186 VRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDS 245

Query: 122 DGLVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTI------ 172
           D  + + +I MY   G+ +E    A  +F  ++  +++ +N++I+ + +    I      
Sbjct: 246 DVFLVSAMIDMYAKKGALVE----AAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVAS 301

Query: 173 SVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL--QQILAMVKKAGLLSD 230
               L+S +Q  G    ++P E+TF S++ A     L+G YL   +QI   V K     D
Sbjct: 302 EALTLYSEVQSRG----MQPTEFTFSSVLRACN---LAG-YLEFGKQIHGQVIKYTFQED 353

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG------------------- 271
            ++GSAL+  +   G      + F    + ++V+   ++ G                   
Sbjct: 354 DFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLG 413

Query: 272 ----------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
                                  R G+++  +  +SG      +GN  V+MYA+ G +D 
Sbjct: 414 AGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDA 473

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +   F+ M   D VSW+ +IS   Q+GC  +A+  F  M    ++ +  + +  L++C+ 
Sbjct: 474 ATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSH 533

Query: 370 LGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSLYADAGYLS 409
            G +  G + +    K  GL   +     ++ L   AG L+
Sbjct: 534 GGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLA 574


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 269/752 (35%), Positives = 432/752 (57%), Gaps = 66/752 (8%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG 275
           +++  ++ K+    + ++ + L++ +++LGN  YAR +F++M Q N  S N ++      
Sbjct: 25  KKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSA---- 80

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
                                    Y+K G +   + +F  M  +D VSWN++ISG    
Sbjct: 81  -------------------------YSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCY 115

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLIST-LSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           G   EA+  + +M +DG+++ N    ST L   +S G + LG+QIHG+ +K G  + V V
Sbjct: 116 GSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFV 175

Query: 395 SNALLSLYADAGYLSRCLKVF-------------------------------FLMPEHDQ 423
            ++L+ +YA  G +S   +VF                                 M E D 
Sbjct: 176 GSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDS 235

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           +SW ++I     +  L +EA+  + DMR+ G + +  TF ++L A       K G ++H 
Sbjct: 236 ISWTTMITGLIQN-GLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHT 294

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
            +I+    +   + +AL+  Y KC  +   E +F RM+ + + VSW +M+ GY  N    
Sbjct: 295 LIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANK-NVVSWTAMLVGYGQNGFSE 353

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +A+ +   M + G   D FT  +V+S+CA++A+LE G + H   + + L   + + +AL+
Sbjct: 354 EAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALI 413

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
            +Y KCG I+ +++ FD M  R+  SW +++SGYA+ G  ++ + LF +M + G  PD V
Sbjct: 414 TLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAV 473

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TF+ VLSACS AGLV+ G ++F+SM + +G+IP  + ++CM+DL GRAG L++ + FINK
Sbjct: 474 TFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINK 533

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           MP +P+S+ W T+L +C        E+G+ AA  L E++PQN   Y+LL+++YA+ GKW 
Sbjct: 534 MPFSPDSIGWATLLSSCRLYG--NEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWS 591

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
           +VA+ R+ M+E   +KE G SW+  K  V++F A D+S P  D IY +L++LN KM + G
Sbjct: 592 NVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEG 651

Query: 844 YVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFK 902
           YVP     L D+E   K  ++++HSEK+A+AF +L     LPIR++KNLRVCGDCH+A K
Sbjct: 652 YVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATK 711

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +ISKI  REI++RD+ RFH F DG CSCGD+W
Sbjct: 712 YISKISQREILVRDAVRFHLFKDGTCSCGDFW 743



 Score =  216 bits (550), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 147/539 (27%), Positives = 268/539 (49%), Gaps = 49/539 (9%)

Query: 4   AKLFHLQILKHGF----AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           +KL ++   +H F      + F  NT+++ Y + GDL++  ++F  MP+R+ VSW  ++S
Sbjct: 51  SKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLIS 110

Query: 60  GYTHKGMSNEACKMFKEMVRAGFL-LNRYALGS--VLRACQECGPSGFKFGMQVHCLVLK 116
           GY   G   EA K +  M++ G L LNR    +  +L + Q C       G Q+H  ++K
Sbjct: 111 GYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGC----VDLGRQIHGQIVK 166

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
                   V + L+ MY   +     A ++F+E++ R+++ +N++I+   + G      +
Sbjct: 167 FGFGAYVFVGSSLVDMYAK-MGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKR 225

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
           LF  M+          +  ++ ++IT    + L    +   +   +++ G+  D Y   +
Sbjct: 226 LFHGMKER--------DSISWTTMITGLIQNGLEAEAM--DLFRDMRQEGMAMDQYTFGS 275

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
                                    V++  G +   ++GKE+H  +IRSG    V VG+ 
Sbjct: 276 -------------------------VLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSA 310

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           LV+MY KC ++  + +VF+ M  K+ VSW  M+ G  QNG  EEA+  FC M+R+G+   
Sbjct: 311 LVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPD 370

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
           +F+L S +SSCA+L  +  G Q H + L  GL S ++VSNAL++LY   G +    ++F 
Sbjct: 371 DFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFD 430

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            M   D+VSW +++  +A      +E +  +  M   G  P+ VTFI +L+A S   + +
Sbjct: 431 EMSFRDEVSWTALVSGYAQF-GKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVE 489

Query: 477 LGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            G Q    ++K + +   +     ++  +G+ G +++ +    +M    D + W +++S
Sbjct: 490 RGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLS 548



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 195/410 (47%), Gaps = 62/410 (15%)

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
            +++H   +K   + +  + N L++ Y+  G ++    VF  MP+ +  SWN+++ A++ 
Sbjct: 24  AKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSK 83

Query: 436 SEAL------------------------------VSEAVKYYLDMRRAG-WSPNGVTFIN 464
           S  L                              V EAVK Y  M + G  + N +TF  
Sbjct: 84  SGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFST 143

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER- 523
           +L   SS     LG Q+H Q++K+       + ++L+  Y K G +    ++F  + ER 
Sbjct: 144 MLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERN 203

Query: 524 -----------------------------RDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
                                        RD +SW +MI+G I N L  +AM+L   M Q
Sbjct: 204 VVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQ 263

Query: 555 RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
            G  +D +TF +VL+AC  +  L+ G E+H   +R+    +V +GSALVDMY KC  + Y
Sbjct: 264 EGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRY 323

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
           A   F  M  +NV SW +M+ GY ++G  ++A+ +F  M+ +G  PD  T   V+S+C++
Sbjct: 324 AEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCAN 383

Query: 675 AGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
              ++EG   F   + V GLI  +   + ++ L G+ G ++   +  ++M
Sbjct: 384 LASLEEG-AQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEM 432



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 135/258 (52%), Gaps = 12/258 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K+ K  H  I++ G+ ++VF+ + L+++Y +   +  A  +F  M ++N VSW  ++ GY
Sbjct: 287 KEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGY 346

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G S EA ++F +M R G   + + LGSV+ +C     +  + G Q HC  L S    
Sbjct: 347 GQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANL--ASLEEGAQFHCQALVSGLIS 404

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              VSN LI +YG C  S + + ++F+E+  RD +SW +++S Y+Q G       LF RM
Sbjct: 405 FITVSNALITLYGKC-GSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERM 463

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL--SDLYVGSALVS 239
             +G    LKP+  TF ++++A   + L      Q   +M+K  G++  SD Y  + ++ 
Sbjct: 464 LVQG----LKPDAVTFIAVLSACSRAGLV-ERGQQYFESMLKDHGIIPFSDHY--TCMID 516

Query: 240 GFARLGNFYYARKIFEQM 257
            F R G    A+    +M
Sbjct: 517 LFGRAGRLEEAKNFINKM 534



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 101/242 (41%), Gaps = 11/242 (4%)

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
           C       +  ++H   +++    +  + + L++ YSK G I YA   FD MP  N +SW
Sbjct: 15  CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           N+M+S Y++ G       +FS M    P  D V++  ++S     G V E  K + SM +
Sbjct: 75  NTMLSAYSKSGDLSTMQEIFSIM----PNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMK 130

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
              L      FS M+ L+   G +D   +   +  I          +G+       K  L
Sbjct: 131 DGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQ--IVKFGFGAYVFVGSSLVDMYAKMGL 188

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
              A+ +  E++ +N V Y  +       G  +D  +    MKE +       SW TM  
Sbjct: 189 VSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERD-----SISWTTMIT 243

Query: 811 GV 812
           G+
Sbjct: 244 GL 245


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 284/701 (40%), Positives = 404/701 (57%), Gaps = 43/701 (6%)

Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVG---NGLVNMYAKCGTIDDSRSVFRFMIGK---DSV 323
           +G R G+E H + ++ G  D        N L++MYA+ G +DD++ +F F  G    D V
Sbjct: 168 QGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLF-FSSGAGVGDLV 226

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           +WNTMIS L Q G  EEA+     M   G+     +  S L +C+ L  + +G+++H   
Sbjct: 227 TWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFV 286

Query: 384 LKLGLDSDVS----VSNALLSLYADAGYLSRCLKVFFLMPEHDQV--SWNSVIGAFADSE 437
           LK   D D++    V++AL+ +YA    +S   +VF ++PEH +    WN++I  +A   
Sbjct: 287 LK---DDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHG 343

Query: 438 ALVSEAVKYYLDMR-RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
            +  EA++ +  M   AG +P+  T   +L A +   +      VH  V+K ++A+   +
Sbjct: 344 GMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFV 403

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR- 555
           +NAL+  Y + G MD+   IFA M + RD VSWN++I+G I   L+ +A  LV  M    
Sbjct: 404 QNALMDMYARLGRMDEAHTIFA-MIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPS 462

Query: 556 -----------------GQRL--DHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
                            GQR   ++ T  T+L  CA +A   RG E+H   VR  LE D+
Sbjct: 463 SAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDL 522

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
            +GSALVDMY+KCG +  A   FD +P RNV +WN +I  Y  HG GD+AL LF +M  +
Sbjct: 523 AVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVAN 582

Query: 657 G-PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD 715
           G   P+ VTF+  L+ACSH+GLVD G + F+ M + YG  P     +C+VD+LGRAG LD
Sbjct: 583 GEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLD 642

Query: 716 KIEEFINKM-PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
           +    I+ M P       W T+LGAC R + R  +LGR AA  LFE+EP  A +YVLL N
Sbjct: 643 EAYGIISSMAPGEHQVSAWSTMLGAC-RLH-RNVKLGRIAAERLFELEPDEASHYVLLCN 700

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           +Y++ G WE+  + R  M++  V KE GCSW+ +   +H F+AG+ +HPE   ++  +  
Sbjct: 701 IYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQVHAHMDA 760

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRV 893
           L ++MR  GYVP T   L D++   K  ++ YHSEK+A+AF L R      IR+ KNLRV
Sbjct: 761 LWERMRREGYVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGATIRVAKNLRV 820

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           C DCH A KFIS++VGREIVLRD  RFHHF DG CSCGDYW
Sbjct: 821 CNDCHEAAKFISRMVGREIVLRDVRRFHHFRDGTCSCGDYW 861



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 155/543 (28%), Positives = 249/543 (45%), Gaps = 71/543 (13%)

Query: 8   HLQILKHGF---AYDVFLCNTLINVYVRVGDLASASKLF--DEMPDRNSVSWACIVSGYT 62
           H   LKHGF     + F  N L+++Y R+G +  A +LF        + V+W  ++S   
Sbjct: 177 HAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLV 236

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-TF 121
             G   EA ++  +MV  G   +     S L AC      G   G +VH  VLK +    
Sbjct: 237 QGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLG--VGREVHAFVLKDDDLAA 294

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIET--RDLISWNSIISVYSQRGDTI-SVFKLF 178
           +  V++ L+ MY S  E    ARR+F+ +    R L  WN++I  Y+Q G       +LF
Sbjct: 295 NSFVASALVDMYASN-EQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELF 353

Query: 179 SRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           SRM+ E       P+E T   ++ A A S V +G    + +   V K  + S+ +V +AL
Sbjct: 354 SRMEAEA---GCAPSETTMAGVLPACARSEVFTGK---EAVHGYVVKRDMASNRFVQNAL 407

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGL 297
           +  +ARLG    A  IF  +  +++VS N L+ G           I  GL          
Sbjct: 408 MDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITG----------CIVQGL---------- 447

Query: 298 VNMYAKCGTIDDSRSVFRFM-IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG--LM 354
                    I ++  + R M +   + S  TM+ G D +               DG   M
Sbjct: 448 ---------ISEAFQLVREMQLPSSAASGETMLEGDDTS--------------VDGQRCM 484

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
            +N +L++ L  CA L     G++IHG  ++  L+SD++V +AL+ +YA  G L+    V
Sbjct: 485 PNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAV 544

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG-WSPNGVTFINILAAASSFS 473
           F  +P  + ++WN +I A+     L  EA+  +  M   G  +PN VTFI  LAA S   
Sbjct: 545 FDRLPRRNVITWNVLIMAYG-MHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSG 603

Query: 474 MGKLGHQVHAQVIKYNVANETT--IENALLSCYGKCGEMDDCEKIFARMSERRDEVS-WN 530
           +   G ++  Q +K +   E T  +   ++   G+ G +D+   I + M+    +VS W+
Sbjct: 604 LVDRGLELF-QGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWS 662

Query: 531 SMI 533
           +M+
Sbjct: 663 TML 665



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 143/502 (28%), Positives = 237/502 (47%), Gaps = 39/502 (7%)

Query: 273 RKGKEVHGYLIRSGLF--DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG--KDSVSWNTM 328
           R  + +HG  +R  L      AV N L+  YA+CG +D + ++F       +D+VS+N++
Sbjct: 65  RSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALALFAATPPDLRDAVSYNSL 124

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG--WIMLGQQIHGEGLKL 386
           IS L     +  A+     M  D  +SS F+L+S L +C+ L      LG++ H   LK 
Sbjct: 125 ISALCLFRRWGHALDALRDMLADHEVSS-FTLVSVLLACSHLADQGHRLGREAHAFALKH 183

Query: 387 G-LDS--DVSVSNALLSLYADAGYLSRCLKVFFLMPE--HDQVSWNSVIGAFADSEALVS 441
           G LD   +    NALLS+YA  G +    ++FF       D V+WN++I           
Sbjct: 184 GFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQG-GRCE 242

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENAL 500
           EAV+   DM   G  P+GVTF + L A S   +  +G +VHA V+K  ++A  + + +AL
Sbjct: 243 EAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASAL 302

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVS-WNSMISGYI-HNELLPKAMNLVWFM-MQRGQ 557
           +  Y    ++    ++F  + E   ++  WN+MI GY  H  +  +A+ L   M  + G 
Sbjct: 303 VDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGC 362

Query: 558 RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
                T A VL ACA          VH   V+  +  +  + +AL+DMY++ GR+D A  
Sbjct: 363 APSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHT 422

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL------------------DGP- 658
            F ++ +R++ SWN++I+G    G   +A  L  +M+L                  DG  
Sbjct: 423 IFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQR 482

Query: 659 -LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
            +P+++T + +L  C+       G K     +  + L   L   S +VD+  + G L   
Sbjct: 483 CMPNNITLMTLLPGCAVLAAPARG-KEIHGYAVRHALESDLAVGSALVDMYAKCGCLALA 541

Query: 718 EEFINKMPITPNSLIWRTVLGA 739
               +++P   N + W  ++ A
Sbjct: 542 RAVFDRLP-RRNVITWNVLIMA 562



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 153/371 (41%), Gaps = 47/371 (12%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K   A + F+ N L+++Y R+G +  A  +F  +  R+ VSW  +++G   +G+ 
Sbjct: 389 HGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLI 448

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRAC-------QECGPSGFKF-------------- 106
           +EA ++ +EM     L +  A G  +          Q C P+                  
Sbjct: 449 SEAFQLVREMQ----LPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPA 504

Query: 107 -GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY 165
            G ++H   ++     D  V + L+ MY  C      AR +F+ +  R++I+WN +I  Y
Sbjct: 505 RGKEIHGYAVRHALESDLAVGSALVDMYAKC-GCLALARAVFDRLPRRNVITWNVLIMAY 563

Query: 166 SQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVK 223
              G       LF RM   G      PNE TF + + A   S L   G  L Q    M +
Sbjct: 564 GMHGLGDEALALFDRMVANG---EATPNEVTFIAALAACSHSGLVDRGLELFQ---GMKR 617

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI--QKNVVSMNGLMEGRRKGKEVH-G 280
             G     Y+ + +V    R G    A  I   M   +  V + + ++   R  + V  G
Sbjct: 618 DYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLG 677

Query: 281 YLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
            +    LF++          L N+Y+  G  ++S  V R M+ +  V+     S ++ +G
Sbjct: 678 RIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEV-RGMMRQRGVAKEPGCSWIELDG 736

Query: 337 CYEEAIMNFCA 347
               AI  F A
Sbjct: 737 ----AIHRFMA 743



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   ++H    D+ + + L+++Y + G LA A  +FD +P RN ++W  ++  Y   
Sbjct: 507 KEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMH 566

Query: 65  GMSNEACKMFKEMVRAG-FLLNRYALGSVLRACQECG 100
           G+ +EA  +F  MV  G    N     + L AC   G
Sbjct: 567 GLGDEALALFDRMVANGEATPNEVTFIAALAACSHSG 603



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 66/284 (23%)

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACL--EFDVVIGSALVDMYSKCGRIDYASR 617
           DHF     + + A++        +H   +R  L       + +AL+  Y++CG +D A  
Sbjct: 47  DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106

Query: 618 FFDLMP--VRNVYSWNSMISG---YARHGHGDKALTLFSQMKLDGPLPDH----VTFVGV 668
            F   P  +R+  S+NS+IS    + R GH   AL     M     L DH     T V V
Sbjct: 107 LFAATPPDLRDAVSYNSLISALCLFRRWGH---ALDALRDM-----LADHEVSSFTLVSV 158

Query: 669 LSACSH------------------AGLVDEGFKHFK-----SMSQVYGLIPQLEQ----- 700
           L ACSH                   G +D+G + F      SM    GL+   ++     
Sbjct: 159 LLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSS 218

Query: 701 ---------FSCMVDLLGRAGELDKIEEFINKM---PITPNSLIWRTVLGACCRANCRKT 748
                    ++ M+ LL + G  ++  + +  M    + P+ + + + L AC R      
Sbjct: 219 GAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLEL--L 276

Query: 749 ELGRKAANMLFEMEPQNAVNYV--LLANMYASGGKWEDVAKARK 790
            +GR+    + + +   A ++V   L +MYAS    E V+ AR+
Sbjct: 277 GVGREVHAFVLKDDDLAANSFVASALVDMYASN---EQVSHARR 317


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 279/795 (35%), Positives = 450/795 (56%), Gaps = 43/795 (5%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-QREGFRYSLKPNEYTFGSLI 201
           AR++F+E+  +++IS N++I  Y + G+  +   LF  M QR    +++    Y   +  
Sbjct: 61  ARKLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRF 120

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
             A++           + A + + G++ D    + L+SGF                    
Sbjct: 121 LEAFN-----------LFADMCRHGMVPDHITLATLLSGFTEF----------------- 152

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                   E   +  +VHG++++ G    + V N L++ Y K  ++  +  +F+ M  KD
Sbjct: 153 --------ESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKD 204

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
           +V++N +++G  + G   +AI  F  M+  G   S F+  + L++   +  I  GQQ+H 
Sbjct: 205 NVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHS 264

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             +K     +V V+NALL  Y+    +    K+F+ MPE D +S+N +I   A     V 
Sbjct: 265 FVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCA-WNGRVE 323

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           E+++ + +++   +      F  +L+ A++    ++G Q+H+Q I  +  +E  + N+L+
Sbjct: 324 ESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLV 383

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
             Y KC +  +  +IFA ++ +   V W ++ISGY+   L    + L   M +     D 
Sbjct: 384 DMYAKCDKFGEANRIFADLAHQ-SSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADS 442

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
            T+A++L ACA++A+L  G ++H+  +R+    +V  GSALVDMY+KCG I  A + F  
Sbjct: 443 ATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQE 502

Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           MPVRN  SWN++IS YA++G G  AL  F QM   G  P+ V+F+ +L ACSH GLV+EG
Sbjct: 503 MPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEG 562

Query: 682 FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACC 741
            ++F SM+QVY L P+ E ++ MVD+L R+G  D+ E+ + +MP  P+ ++W ++L + C
Sbjct: 563 LQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNS-C 621

Query: 742 RANCRKTELGRKAANMLFEMEP-QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKE 800
           R + +  EL  KAA+ LF M+  ++A  YV ++N+YA+ G+W+ V K +KA++E  ++K 
Sbjct: 622 RIH-KNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKV 680

Query: 801 AGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESK 860
              SWV +K   HVF A D SHP+   I  KL EL ++M + GY P +  AL +++ E K
Sbjct: 681 PAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEEVK 740

Query: 861 EDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNR 919
            + + YHSE+IA+AF L    K  PI +MKNLR C DCH+A K ISKIV REI +RDS+R
Sbjct: 741 VESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVISKIVNREITVRDSSR 800

Query: 920 FHHFNDGKCSCGDYW 934
           FHHF DG CSC DYW
Sbjct: 801 FHHFTDGSCSCKDYW 815



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 165/581 (28%), Positives = 279/581 (48%), Gaps = 59/581 (10%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +V   NT+I  Y++ G+L++A  LFD M  R+ V+W  ++ GY       EA  +F +M 
Sbjct: 72  NVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMC 131

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           R G + +   L ++L    E          QVH  V+K       +V N L+  Y     
Sbjct: 132 RHGMVPDHITLATLLSGFTEF--ESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKT-R 188

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
           S   A  +F+ +  +D +++N++++ YS+ G       LF +MQ  GFR    P+E+TF 
Sbjct: 189 SLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFR----PSEFTFA 244

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           +++TA     +      QQ+ + V K   + +++V +AL+  +++      ARK+F +M 
Sbjct: 245 AVLTAGIQ--MDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMP 302

Query: 259 QKNVVSMNGLME-----------------------GRRK------------------GKE 277
           + + +S N L+                         RR+                  G++
Sbjct: 303 EVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQ 362

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +H   I +     V VGN LV+MYAKC    ++  +F  +  + SV W  +ISG  Q G 
Sbjct: 363 IHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGL 422

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
           +E+ +  F  M R  + + + +  S L +CA+L  + LG+Q+H   ++ G  S+V   +A
Sbjct: 423 HEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSA 482

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+ +YA  G +   L++F  MP  + VSWN++I A+A +      A++ +  M  +G  P
Sbjct: 483 LVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQN-GDGGHALRSFEQMIHSGLQP 541

Query: 458 NGVTFINILAAASSFSMGKLGHQVH---AQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
           N V+F++IL A S   + + G Q      QV K     E       + C  + G  D+ E
Sbjct: 542 NSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLC--RSGRFDEAE 599

Query: 515 KIFARMSERRDEVSWNSMI-SGYIH--NELLPKAMNLVWFM 552
           K+ ARM    DE+ W+S++ S  IH   EL  KA + ++ M
Sbjct: 600 KLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNM 640



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 135/526 (25%), Positives = 251/526 (47%), Gaps = 55/526 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K G+   + +CN+L++ Y +   L  A  LF  M ++++V++  +++GY+ +G +
Sbjct: 162 HGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFN 221

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           ++A  +F +M   GF  + +   +VL A  +      +FG QVH  V+K N  ++  V+N
Sbjct: 222 HDAINLFFKMQDLGFRPSEFTFAAVLTAGIQM--DDIEFGQQVHSFVVKCNFVWNVFVAN 279

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+  Y       + AR++F E+   D IS+N +I+  +  G      +LF  +Q   F 
Sbjct: 280 ALLDFYSKHDRIVE-ARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRF- 337

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
                 ++ F +L++ A +S+     + +QI +       +S++ VG++LV  +A+   F
Sbjct: 338 ---DRRQFPFATLLSIAANSL--NLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKF 392

Query: 248 YYARKIFEQMIQKNVVSMNGLMEG------------------RRK--------------- 274
             A +IF  +  ++ V    L+ G                  R K               
Sbjct: 393 GEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRAC 452

Query: 275 --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                   GK++H  +IRSG    V  G+ LV+MYAKCG+I ++  +F+ M  ++SVSWN
Sbjct: 453 ANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWN 512

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            +IS   QNG    A+ +F  M   GL  ++ S +S L +C+  G +  G Q      ++
Sbjct: 513 ALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQV 572

Query: 387 -GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA--FADSEALVSE 442
             L+       +++ +   +G      K+   MP E D++ W+S++ +     ++ L  +
Sbjct: 573 YKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIK 632

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSF-SMGKLGHQVHAQVIK 487
           A     +M+    +   V+  NI AAA  + S+GK+   +  + I+
Sbjct: 633 AADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIR 678



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 55/96 (57%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H +I++ G   +VF  + L+++Y + G +  A ++F EMP RNSVSW  ++S Y   
Sbjct: 462 KQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQN 521

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G    A + F++M+ +G   N  +  S+L AC  CG
Sbjct: 522 GDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCG 557


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 289/792 (36%), Positives = 440/792 (55%), Gaps = 100/792 (12%)

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
           +G +  Q +   V K+GL+  +Y+ + L++ +++ G   +ARK+F++M  +   S N ++
Sbjct: 28  NGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVL 87

Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
                                          Y+K G +D +   F  +  +DSVSW TMI
Sbjct: 88  SA-----------------------------YSKRGDMDSTCEFFDQLPQRDSVSWTTMI 118

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
            G    G Y +AI     M ++G+  + F+L + L+S A+   +  G+++H   +KLGL 
Sbjct: 119 VGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLR 178

Query: 390 SDVSVSNALLSLYA-------------------------------DAGYLSRCLKVFFLM 418
            +VSVSN+LL++YA                                 G +   +  F  M
Sbjct: 179 GNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM 238

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDM-RRAGWSPNGVTFINILAAASSFSMGKL 477
            E D V+WNS+I  F +       A+  +  M R +  SP+  T  ++L+A ++     +
Sbjct: 239 AERDIVTWNSMISGF-NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCI 297

Query: 478 GHQVHAQVIKYNVANETTIENALLSCYGKCG----------------------------- 508
           G Q+H+ ++         + NAL+S Y +CG                             
Sbjct: 298 GKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357

Query: 509 ----EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
               +M+  + IF  + +R D V+W +MI GY  +    +A+NL   M+  GQR + +T 
Sbjct: 358 IKLGDMNQAKNIFVSLKDR-DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTL 416

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
           A +LS  +S+A+L  G ++H   V++   + V + +AL+ MY+K G I  ASR FDL+  
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRC 476

Query: 625 -RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            R+  SW SMI   A+HGH ++AL LF  M ++G  PDH+T+VGV SAC+HAGLV++G +
Sbjct: 477 ERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ 536

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
           +F  M  V  +IP L  ++CMVDL GRAG L + +EFI KMPI P+ + W ++L A CR 
Sbjct: 537 YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA-CRV 595

Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
           + +  +LG+ AA  L  +EP+N+  Y  LAN+Y++ GKWE+ AK RK+MK+  VKKE G 
Sbjct: 596 H-KNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGF 654

Query: 804 SWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDL 863
           SW+ +K  VHVF   D +HPEK+ IY  +K++  +++  GYVP T   L DLE E KE +
Sbjct: 655 SWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQI 714

Query: 864 VSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHH 922
           + +HSEK+A+AF +++   K  +RIMKNLRVC DCH+A KFISK+VGREI++RD+ RFHH
Sbjct: 715 LRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHH 774

Query: 923 FNDGKCSCGDYW 934
           F DG CSC DYW
Sbjct: 775 FKDGFCSCRDYW 786



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 162/597 (27%), Positives = 278/597 (46%), Gaps = 102/597 (17%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEM----------------- 46
           A+L H +++K G  + V+L N L+NVY + G    A KLFDEM                 
Sbjct: 33  AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92

Query: 47  --------------PDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSV 92
                         P R+SVSW  ++ GY + G  ++A ++  +MV+ G    ++ L +V
Sbjct: 93  RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152

Query: 93  LR--ACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC-------------- 136
           L   A   C  +G K    VH  ++K     +  VSN L+ MY  C              
Sbjct: 153 LASVAATRCMETGKK----VHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV 208

Query: 137 ----------------LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
                           +   D A   FE++  RD+++WNS+IS ++QRG  +    +FS+
Sbjct: 209 VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSK 268

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M R+     L P+ +T  S+++A  +  L    + +QI + +   G      V +AL+S 
Sbjct: 269 MLRDSL---LSPDRFTLASVLSACAN--LEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
           ++R G    AR++ EQ   K++              ++ G+               L++ 
Sbjct: 324 YSRCGGVETARRLIEQRGTKDL--------------KIEGF-------------TALLDG 356

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           Y K G ++ ++++F  +  +D V+W  MI G +Q+G Y EAI  F +M   G   ++++L
Sbjct: 357 YIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTL 416

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP- 419
            + LS  +SL  +  G+QIHG  +K G    VSVSNAL+++YA AG ++   + F L+  
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRC 476

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
           E D VSW S+I A A       EA++ +  M   G  P+ +T++ + +A +   +   G 
Sbjct: 477 ERDTVSWTSMIIALA-QHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR 535

Query: 480 QVHAQVIKYNVANETTIENA-LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           Q    +   +    T    A ++  +G+ G + + ++   +M    D V+W S++S 
Sbjct: 536 QYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 128/293 (43%), Gaps = 74/293 (25%)

Query: 464 NILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
           N+L  + + S G+   Q VH +VIK  +     + N L++ Y K G      K+F  M  
Sbjct: 18  NLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPL 77

Query: 523 R------------------------------RDEVSWNSMISGYIHNELLPKAMNLVWFM 552
           R                              RD VSW +MI GY +     KA+ ++  M
Sbjct: 78  RTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDM 137

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC--- 609
           ++ G     FT   VL++ A+   +E G +VH+  V+  L  +V + ++L++MY+KC   
Sbjct: 138 VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDP 197

Query: 610 ----------------------------GRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
                                       G++D A   F+ M  R++ +WNSMISG+ + G
Sbjct: 198 MMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRG 257

Query: 642 HGDKALTLFSQMKLDGPL-PDHVTFVGVLSACS-----------HAGLVDEGF 682
           +  +AL +FS+M  D  L PD  T   VLSAC+           H+ +V  GF
Sbjct: 258 YDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGF 310



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 139/302 (46%), Gaps = 17/302 (5%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
             L++ Y+++GD+  A  +F  + DR+ V+W  ++ GY   G   EA  +F+ MV  G  
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
            N Y L ++L        +    G Q+H   +KS + +   VSN LI MY      T  A
Sbjct: 411 PNSYTLAAMLSVASS--LASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITS-A 467

Query: 144 RRIFEEIE-TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
            R F+ I   RD +SW S+I   +Q G      +LF  M  EG R    P+  T+  + +
Sbjct: 468 SRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLR----PDHITYVGVFS 523

Query: 203 AAYSSVLSGSYLLQQILAMVKKAG-LLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQK 260
           A   + L      +Q   M+K    ++  L   + +V  F R G    A++  E+M I+ 
Sbjct: 524 ACTHAGLVNQG--RQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP 581

Query: 261 NVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFR 315
           +VV+   L+   R  K +  G +    L  +    +G    L N+Y+ CG  +++  + +
Sbjct: 582 DVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRK 641

Query: 316 FM 317
            M
Sbjct: 642 SM 643


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 298/867 (34%), Positives = 464/867 (53%), Gaps = 78/867 (8%)

Query: 70   ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
            A ++ +   ++   LN Y+  S+L+ C E      + G  VH ++  +    +G++   L
Sbjct: 437  AVELLRMSQKSELDLNAYS--SILQLCAE--HKCLQEGKMVHSVISSNGIPIEGVLGAKL 492

Query: 130  IAMYGSCLESTDCARRIFEEIETRD-LISWNSIISVYSQRGDTISVFKLFSRMQREGFRY 188
            + MY SC    +  RRIF+ I + + +  WN ++S Y++ GD               +R 
Sbjct: 493  VFMYVSCGALRE-GRRIFDHILSDNKVFLWNLMMSEYAKIGD---------------YRE 536

Query: 189  SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
            S+                      YL +++    +K G+  + Y  S ++  FA LG   
Sbjct: 537  SI----------------------YLFKKM----QKLGITGNSYTFSCILKCFATLGRVG 570

Query: 249  YARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
              ++I                         HG + + G      V N L+  Y K G +D
Sbjct: 571  ECKRI-------------------------HGCVYKLGFGSYNTVVNSLIATYFKSGEVD 605

Query: 309  DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
             +  +F  +  +D VSWN+MISG   NG    A+  F  M    +     +L++++++CA
Sbjct: 606  SAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACA 665

Query: 369  SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
            ++G + LG+ +HG+G+K     +V  +N LL +Y+  G L+  ++ F  M +   VSW S
Sbjct: 666  NVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTS 725

Query: 429  VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
            +I A+   E L  +A++ + +M   G SP+  +  ++L A +  +    G  VH  + K 
Sbjct: 726  LIAAYV-REGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKN 784

Query: 489  NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNL 548
            N+A    + NAL+  Y KCG M++   +F+++   +D VSWN+MI GY  N L  +A+ L
Sbjct: 785  NMALCLPVSNALMDMYAKCGSMEEAYLVFSQIP-VKDIVSWNTMIGGYSKNSLPNEALKL 843

Query: 549  VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
             +  MQ+  R D  T A +L AC S+A LE G  +H C +R     ++ + +AL+DMY K
Sbjct: 844  -FAEMQKESRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVK 902

Query: 609  CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
            CG + +A   FD++P +++ +W  MISG   HG G++A+  F +M++ G  PD +TF  +
Sbjct: 903  CGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSI 962

Query: 669  LSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITP 728
            L ACSH+GL++EG+  F SM     + P+LE ++CMVDLL R G L K    I  MPI P
Sbjct: 963  LYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKP 1022

Query: 729  NSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKA 788
            ++ IW  +L   CR +    EL  K A  +FE+EP NA  YVLLAN+YA   KWE+V K 
Sbjct: 1023 DATIWGALLCG-CRIH-HDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKL 1080

Query: 789  RKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQT 848
            R+ + +  +KK  GCSW+ ++     FV+ D +HP+   I+  L  L  KM++ G+ P+ 
Sbjct: 1081 RERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKM 1140

Query: 849  KFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKI 907
            ++AL +     KE  +  HSEK+A+AF +L   S   IR+ KNLRVC DCH   KF+SK 
Sbjct: 1141 RYALINAGDMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKT 1200

Query: 908  VGREIVLRDSNRFHHFNDGKCSCGDYW 934
              REI+LRDSNRFHHF DG CSC D+W
Sbjct: 1201 TRREIILRDSNRFHHFKDGFCSCRDFW 1227



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 157/587 (26%), Positives = 263/587 (44%), Gaps = 61/587 (10%)

Query: 2    KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSV-SWACIVSG 60
            ++ K+ H  I  +G   +  L   L+ +YV  G L    ++FD +   N V  W  ++S 
Sbjct: 468  QEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSE 527

Query: 61   YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
            Y   G   E+  +FK+M + G   N Y    +L+     G  G     ++H  V K    
Sbjct: 528  YAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVG--ECKRIHGCVYKLGFG 585

Query: 121  FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
                V N LIA Y    E  D A ++F+E+  RD++SWNS+IS     G + S  + F +
Sbjct: 586  SYNTVVNSLIATYFKSGE-VDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQ 644

Query: 181  M--QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQIL-AMVKKAGLLSDLYVGSAL 237
            M   R G             +L+ +  +    GS  L + L     KA    ++   + L
Sbjct: 645  MLILRVGV---------DLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTL 695

Query: 238  VSGFARLGNFYYARKIFEQMIQKNVVSMNGL-------------------MEGR------ 272
            +  +++ GN   A + FE+M QK VVS   L                   ME +      
Sbjct: 696  LDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDV 755

Query: 273  ----------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                             KG++VH Y+ ++ +   + V N L++MYAKCG+++++  VF  
Sbjct: 756  YSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQ 815

Query: 317  MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
            +  KD VSWNTMI G  +N    EA+  F  M+++       ++   L +C SL  + +G
Sbjct: 816  IPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIG 874

Query: 377  QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
            + IHG  L+ G  S++ V+NAL+ +Y   G L     +F ++PE D ++W  +I      
Sbjct: 875  RGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISG-CGM 933

Query: 437  EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANETT 495
              L +EA+  +  MR AG  P+ +TF +IL A S   +   G      +I + N+  +  
Sbjct: 934  HGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLE 993

Query: 496  IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
                ++    + G +     +   M  + D   W +++ G  IH+++
Sbjct: 994  HYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDV 1040



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 132/518 (25%), Positives = 235/518 (45%), Gaps = 62/518 (11%)

Query: 3    DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
            + K  H  + K GF     + N+LI  Y + G++ SA KLFDE+ DR+ VSW  ++SG  
Sbjct: 571  ECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCV 630

Query: 63   HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
              G S+ A + F +M+     ++   L + + AC   G      G  +H   +K+  + +
Sbjct: 631  MNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGS--LSLGRALHGQGVKACFSRE 688

Query: 123  GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             + +N L+ MY  C    D A + FE++  + ++SW S+I+ Y + G      +LF  M+
Sbjct: 689  VMFNNTLLDMYSKCGNLND-AIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEME 747

Query: 183  REGFRYSLKPNEYTFGSLITAAY--SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
             +G    + P+ Y+  S++ A    +S+  G    + +   ++K  +   L V +AL+  
Sbjct: 748  SKG----VSPDVYSMTSVLHACACGNSLDKG----RDVHNYIRKNNMALCLPVSNALMDM 799

Query: 241  FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------- 274
            +A+ G+   A  +F Q+  K++VS N ++ G  K                          
Sbjct: 800  YAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESRPDGITMA 859

Query: 275  --------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                          G+ +HG ++R+G    + V N L++MY KCG++  +R +F  +  K
Sbjct: 860  CLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEK 919

Query: 321  DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
            D ++W  MISG   +G   EAI  F  MR  G+     +  S L +C+  G +  G    
Sbjct: 920  DLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFF 979

Query: 381  GEGL-KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI-GAFADSE 437
               + +  ++  +     ++ L A  G LS+   +   MP + D   W +++ G     +
Sbjct: 980  NSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHD 1039

Query: 438  ALVSEAVK---YYLDMRRAGWSPNGVTFINILAAASSF 472
              ++E V    + L+   AG+    V   NI A A  +
Sbjct: 1040 VELAEKVAEHVFELEPDNAGYY---VLLANIYAEAEKW 1074


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  501 bits (1289), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 303/916 (33%), Positives = 485/916 (52%), Gaps = 63/916 (6%)

Query: 14   HGFA------YDVFLCNTLINVYVRVGDLASAS---KLFDEMPDRNSVSWACIVSGYTHK 64
            HG A         F  NTL+  Y R  D ++A+    LFDEM DR   +W   VSG    
Sbjct: 262  HGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVRC 321

Query: 65   GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG-PSGFKFGMQVHCLVLKSNQTFDG 123
            G   +A +M + M   G  L+ +AL S++ AC+  G   G   G  +H L  ++    + 
Sbjct: 322  GSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNV 381

Query: 124  LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
             +   L+ +YGS    +D A+R+F E+  R+++SW +++   S  G      + + +M+R
Sbjct: 382  YIGTALLHLYGSRGIVSD-AQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRR 440

Query: 184  EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            +G    +  N   F ++++   S  L       Q+ + V  +GL + + V ++L++ F  
Sbjct: 441  DG----VPCNANAFATVVSLCGS--LENEVPGLQVASQVIVSGLQNQVSVANSLITMFGN 494

Query: 244  LGNFYYARKIFEQMIQKNVVSMNGLM---------------------EGRRK-------- 274
            LG  + A K+F++M + + +S N ++                      G R         
Sbjct: 495  LGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSL 554

Query: 275  ------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                        G  +H   +RS L   V V N LVNMY+  G + D+  +F  M  +D 
Sbjct: 555  MSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDL 614

Query: 323  VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
            +SWNTMIS   QN    +A+     +       ++ +  S L +C+S G ++ G+ +H  
Sbjct: 615  ISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAI 674

Query: 383  GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
             L+L L  ++ V N+L+++Y     +    KVF  MP HD VS+N +IG +A  E   ++
Sbjct: 675  VLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLED-GTK 733

Query: 443  AVKYYLDMRRAGWSPNGVTFINILAA-ASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
            A++ +  MR AG  PN +T INI  + ASS  +   G  +HA +I+    ++  + N+L+
Sbjct: 734  AMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLI 793

Query: 502  SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
            + Y KCG ++    IF  ++ + + VSWN++I+  +      +A+ L   M   G +LD 
Sbjct: 794  TMYAKCGNLESSTNIFNSITNK-NIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDR 852

Query: 562  FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
               A  LS+CAS+A+LE GM++H  G+++ L+ D  + +A +DMY KCG++D   +    
Sbjct: 853  VCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPD 912

Query: 622  MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
              +R    WN++ISGYA++G+  +A   F QM   G  PD+VTFV +LSACSHAGLVD+G
Sbjct: 913  QAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKG 972

Query: 682  FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACC 741
              ++ SM+  +G+ P ++   C+VDLLGR G   + E+FI +MP+ PN LIWR++L +  
Sbjct: 973  IDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSS- 1031

Query: 742  RANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA 801
                +  E+GRK A  L E++P +   YVLL+N+YA+  +W DV K R  MK   + K  
Sbjct: 1032 -RTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRP 1090

Query: 802  GCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKE 861
             CSW+ +K+ V  F  GD  H   + IY KL E+  K+R+ GY+  T  AL D + E KE
Sbjct: 1091 ACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYIADTSSALHDTDEEQKE 1150

Query: 862  DLVSYHSEKIAVAFVL 877
              +  HSEK+A+A+ L
Sbjct: 1151 QNLWNHSEKLALAYGL 1166



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 188/673 (27%), Positives = 316/673 (46%), Gaps = 53/673 (7%)

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCAR--RIFEEIETRDLISWNSIISVYSQ 167
           +H L ++          N L+A Y    +++  A    +F+E+  R   +W + +S   +
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL-SGSYLLQQILAMVKKAG 226
            G     F++   M+  G   S     +   SL+TA        G      I A+  +AG
Sbjct: 321 CGSHGKAFEMLRGMREPGVPLS----GFALASLVTACERRGRDEGIACGAAIHALTHRAG 376

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM----------------- 269
           L+ ++Y+G+AL+  +   G    A+++F +M ++NVVS   LM                 
Sbjct: 377 LMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYR 436

Query: 270 ------------------------EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
                                   E    G +V   +I SGL + V+V N L+ M+   G
Sbjct: 437 QMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLG 496

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            + D+  +F  M   D++SWN MIS     G   +  + F  MR  GL     +L S +S
Sbjct: 497 RVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMS 556

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
            CAS      G  IH   L+  LDS V+V NAL+++Y+ AG LS    +F+ M   D +S
Sbjct: 557 VCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLIS 616

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           WN++I ++  +    ++A+K    +     SPN +TF + L A SS      G  VHA V
Sbjct: 617 WNTMISSYVQN-CNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIV 675

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
           ++ ++     + N+L++ YGKC  M+D EK+F  M    D VS+N +I GY   E   KA
Sbjct: 676 LQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPT-HDIVSYNVLIGGYAVLEDGTKA 734

Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLER-GMEVHACGVRACLEFDVVIGSALVD 604
           M +  +M   G + ++ T   +  + AS   L   G  +HA  +R     D  + ++L+ 
Sbjct: 735 MQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLIT 794

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
           MY+KCG ++ ++  F+ +  +N+ SWN++I+   + GHG++AL LF  M+  G   D V 
Sbjct: 795 MYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVC 854

Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
               LS+C+    ++EG +    +    GL       +  +D+ G+ G++D++ + +   
Sbjct: 855 LAECLSSCASLASLEEGMQ-LHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQ 913

Query: 725 PITPNSLIWRTVL 737
            I P    W T++
Sbjct: 914 AIRPQQ-CWNTLI 925



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 188/691 (27%), Positives = 328/691 (47%), Gaps = 81/691 (11%)

Query: 7    FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
             H    + G   +V++   L+++Y   G ++ A +LF EMP+RN VSW  ++   +  G 
Sbjct: 368  IHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGY 427

Query: 67   SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
              EA + +++M R G   N  A  +V+  C          G+QV   V+ S       V+
Sbjct: 428  LEEALRAYRQMRRDGVPCNANAFATVVSLCGSL--ENEVPGLQVASQVIVSGLQNQVSVA 485

Query: 127  NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
            N LI M+G+     D A ++F+ +E  D ISWN++IS+YS +G     F +FS M+  G 
Sbjct: 486  NSLITMFGNLGRVHD-AEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGL 544

Query: 187  RYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
            R    P+  T  SL++   SS     GS     I ++  ++ L S + V +ALV+ ++  
Sbjct: 545  R----PDATTLCSLMSVCASSDHFSHGS----GIHSLCLRSSLDSSVTVINALVNMYSAA 596

Query: 245  GNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------ 274
            G    A  +F  M +++++S N ++    +                              
Sbjct: 597  GKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSAL 656

Query: 275  -----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                       GK VH  +++  L   + VGN L+ MY KC +++D+  VF+ M   D V
Sbjct: 657  GACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIV 716

Query: 324  SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM-LGQQIHGE 382
            S+N +I G        +A+  F  MR  G+  +  ++I+   S AS   +   G+ +H  
Sbjct: 717  SYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAY 776

Query: 383  GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA---FADSEAL 439
             ++ G  SD  V+N+L+++YA  G L     +F  +   + VSWN++I A       E  
Sbjct: 777  IIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGE-- 834

Query: 440  VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
              EA+K ++DM+ AG   + V     L++ +S +  + G Q+H   +K  + +++ + NA
Sbjct: 835  --EALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNA 892

Query: 500  LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
             +  YGKCG+MD+  ++    + R  +  WN++ISGY       +A      M+  G++ 
Sbjct: 893  AMDMYGKCGKMDEMLQVVPDQAIRPQQC-WNTLISGYAKYGYFKEAEETFKQMVATGRKP 951

Query: 560  DHFTFATVLSACASVATLERGMEVH---------ACGVRACLEFDVVIGSALVDMYSKCG 610
            D+ TF  +LSAC+    +++G++ +         + G++ C+         +VD+  + G
Sbjct: 952  DYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCV--------CIVDLLGRLG 1003

Query: 611  RIDYASRFFDLMPV-RNVYSWNSMISGYARH 640
            R   A +F + MPV  N   W S++S    H
Sbjct: 1004 RFAEAEKFIEEMPVLPNDLIWRSLLSSSRTH 1034



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 134/569 (23%), Positives = 239/569 (42%), Gaps = 90/569 (15%)

Query: 7    FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
             H   L+      V + N L+N+Y   G L+ A  LF  M  R+ +SW  ++S Y     
Sbjct: 570  IHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCN 629

Query: 67   SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            S +A K   ++       N     S L AC    P     G  VH +VL+ +   + LV 
Sbjct: 630  STDALKTLGQLFHTNESPNHLTFSSALGACSS--PGALIDGKMVHAIVLQLSLQRNLLVG 687

Query: 127  NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
            N LI MYG C  S + A ++F+ + T D++S+N +I  Y+   D     ++FS M+  G 
Sbjct: 688  NSLITMYGKC-NSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAG- 745

Query: 187  RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
               +KPN  T  + I  +++S        + + A + + G LSD YV ++L++ +A+ GN
Sbjct: 746  ---IKPNYITMIN-IHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGN 801

Query: 247  FYYARKIFEQMIQKNVVSMNGLMEGR---------------------------------- 272
               +  IF  +  KN+VS N ++                                     
Sbjct: 802  LESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSS 861

Query: 273  -------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    +G ++HG  ++SGL     V N  ++MY KCG +D+   V      +    W
Sbjct: 862  CASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCW 921

Query: 326  NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
            NT+ISG  + G ++EA   F  M   G      + ++ LS+C+  G +            
Sbjct: 922  NTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLV------------ 969

Query: 386  LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
               D  +   N++ S +  +  +  C+ +  L+           +G FA++E  + E   
Sbjct: 970  ---DKGIDYYNSMASSFGVSPGIKHCVCIVDLLGR---------LGRFAEAEKFIEEMPV 1017

Query: 446  YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS-CY 504
                       PN + + ++L+++ +    ++G +   ++++ +  +++     LLS  Y
Sbjct: 1018 L----------PNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAY--VLLSNLY 1065

Query: 505  GKCGEMDDCEKIFARMS----ERRDEVSW 529
                   D +K+ + M      +R   SW
Sbjct: 1066 ATNARWADVDKLRSHMKTININKRPACSW 1094



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 31/283 (10%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D K+ H  +L+     ++ + N+LI +Y +   +  A K+F  MP  + VS+  ++ GY 
Sbjct: 667 DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYA 726

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                 +A ++F  M  AG   N   + ++             +G  +H  ++++    D
Sbjct: 727 VLEDGTKAMQVFSWMRSAGIKPNYITMINI-HGSFASSNDLHNYGRPLHAYIIRTGFLSD 785

Query: 123 GLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
             V+N LI MY  C  LES+     IF  I  ++++SWN+II+   Q G      KLF  
Sbjct: 786 EYVANSLITMYAKCGNLESST---NIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFID 842

Query: 181 MQREGF---RYSLKPNEYTFGSLIT----------AAYSSVLSGSYLLQQILAMVKKAGL 227
           MQ  G    R  L     +  SL +             S + S SY++   + M  K G 
Sbjct: 843 MQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGK 902

Query: 228 LSDLY------------VGSALVSGFARLGNFYYARKIFEQMI 258
           + ++               + L+SG+A+ G F  A + F+QM+
Sbjct: 903 MDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMV 945



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 59/127 (46%), Gaps = 15/127 (11%)

Query: 14  HGFA------YDVFLCNTLINVYVRVGDLASAS---KLFDEMPDRNSVSWACIVSGYTHK 64
           HG A         F  NTL+  Y R  D ++A+    LFDEM DR   +W   VSG    
Sbjct: 39  HGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVRC 98

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG-PSGFKFGMQVHCLVLKSNQTFDG 123
           G    A +M + M   G  L+ +AL S++ AC+  G   G   G  +H L  ++     G
Sbjct: 99  GRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRA-----G 153

Query: 124 LVSNVLI 130
           L+ NV I
Sbjct: 154 LMGNVYI 160


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 275/708 (38%), Positives = 406/708 (57%), Gaps = 70/708 (9%)

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLF 288
           +D ++ + L+  +A+ GN   AR +F++M +++V S N ++                   
Sbjct: 56  TDTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSA----------------- 98

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
                       Y+K G ++D R+VF  M   D+VS+NT+I+G   NGC  +A+  F  M
Sbjct: 99  ------------YSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRM 146

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           + +G  S++++ +S L +C+ L  I  G+QIHG  +   L   V V NAL ++YA  G L
Sbjct: 147 QEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGAL 206

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
            +   +F  M   + VSWNS+I  +  +        K + +M+ +G  P+ VT  NIL+A
Sbjct: 207 DQARWLFDRMVNKNVVSWNSMISGYLQN-GQPETCTKLFCEMQSSGLMPDQVTISNILSA 265

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
                                              Y +CG +D+  K F  + E+ D+V 
Sbjct: 266 -----------------------------------YFQCGYIDEACKTFREIKEK-DKVC 289

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           W +M+ G   N     A+ L   M+    R D+FT ++V+S+CA +A+L +G  VH   V
Sbjct: 290 WTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAV 349

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
              ++ D+++ SALVDMYSKCG    A   F  M  RNV SWNSMI GYA++G   +AL 
Sbjct: 350 IFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALA 409

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           L+ +M  +   PD++TFVGVLSAC HAGLV+ G  +F S+S+++G+ P  + +SCM++LL
Sbjct: 410 LYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLL 469

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
           GRAG +DK  + I  M   PN LIW T+L   CR NC     G  AA  LFE++P NA  
Sbjct: 470 GRAGYMDKAVDLIKSMTFEPNCLIWSTLLSV-CRINCDVNN-GEMAARHLFELDPHNAGP 527

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
           Y++L+N+YA+ G+W+DVA  R  MK  ++KK A  SW+ + + VH FVA D +H E + I
Sbjct: 528 YIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQI 587

Query: 829 YEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR--NSKLPIR 886
           YE+L  L +K++++G+ P T   L D+  E K D + YHSEK+A+AF L +  + + PIR
Sbjct: 588 YEELNRLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIR 647

Query: 887 IMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           IMKN+RVCGDCH   KF+SKI+ R I+LRD NRFHHF +G+CSC D W
Sbjct: 648 IMKNIRVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 229/466 (49%), Gaps = 49/466 (10%)

Query: 108 MQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQ 167
           +Q H + L   Q  D  + N L+ +Y      +D AR +F+++  RD+ SWN+++S YS+
Sbjct: 44  LQTH-MDLHLYQPTDTFLQNRLLHLYAKSGNLSD-ARDLFDKMSRRDVFSWNAMLSAYSK 101

Query: 168 RG---------DTISV----------------------FKLFSRMQREGFRYSLKPNEYT 196
            G         D +SV                       + F RMQ EGF    +  +YT
Sbjct: 102 SGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGF----ESTDYT 157

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
             S++ A   S L      +QI   +    L   ++V +AL + +A+ G    AR +F++
Sbjct: 158 HVSVLHAC--SQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDR 215

Query: 257 MIQKNVVSMNGLMEGRRKGKEVHG------YLIRSGLF-DMVAVGNGLVNMYAKCGTIDD 309
           M+ KNVVS N ++ G  +  +          +  SGL  D V + N +++ Y +CG ID+
Sbjct: 216 MVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISN-ILSAYFQCGYIDE 274

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +   FR +  KD V W TM+ G  QNG  E+A++ F  M  + +   NF++ S +SSCA 
Sbjct: 275 ACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCAR 334

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           L  +  GQ +HG+ +  G+D D+ VS+AL+ +Y+  G  +    VF  M   + +SWNS+
Sbjct: 335 LASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSM 394

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           I  +A +   + EA+  Y +M      P+ +TF+ +L+A     + + G      + K +
Sbjct: 395 ILGYAQNGKDL-EALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIH 453

Query: 490 VANETTIE-NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
             N T    + +++  G+ G MD    +   M+   + + W++++S
Sbjct: 454 GMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLS 499



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 212/427 (49%), Gaps = 29/427 (6%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DVF  N +++ Y + G++     +FD+M   ++VS+  +++G++  G S++A + F  M 
Sbjct: 88  DVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQ 147

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             GF    Y   SVL AC +      K G Q+H  ++ ++      V N L  MY  C  
Sbjct: 148 EEGFESTDYTHVSVLHACSQL--LDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKC-G 204

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
           + D AR +F+ +  ++++SWNS+IS Y Q G   +  KLF  MQ  G    L P++ T  
Sbjct: 205 ALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSG----LMPDQVTIS 260

Query: 199 SLITAAYSSVLSGSYLLQ--QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           ++++A +       Y+ +  +    +K+     D    + ++ G A+ G    A  +F +
Sbjct: 261 NILSAYFQC----GYIDEACKTFREIKE----KDKVCWTTMMVGCAQNGKEEDALLLFRE 312

Query: 257 MIQKN----------VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
           M+ +N          VVS    +    +G+ VHG  +  G+   + V + LV+MY+KCG 
Sbjct: 313 MLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGE 372

Query: 307 IDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
             D+  VF+ M+ ++ +SWN+MI G  QNG   EA+  +  M  + L   N + +  LS+
Sbjct: 373 TADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSA 432

Query: 367 CASLGWIMLGQQIHGEGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQV 424
           C   G +  GQ       K+ G++      + +++L   AGY+ + + +   M  E + +
Sbjct: 433 CMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCL 492

Query: 425 SWNSVIG 431
            W++++ 
Sbjct: 493 IWSTLLS 499



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 169/391 (43%), Gaps = 71/391 (18%)

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS- 436
           Q H + L L   +D  + N LL LYA +G LS    +F  M   D  SWN+++ A++ S 
Sbjct: 45  QTHMD-LHLYQPTDTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSG 103

Query: 437 -----------------------------EALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
                                            S+A+++++ M+  G+     T +++L 
Sbjct: 104 NVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLH 163

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
           A S     K G Q+H +++  ++     + NAL + Y KCG +D    +F RM   ++ V
Sbjct: 164 ACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVN-KNVV 222

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           SWNSMISGY+ N        L   M   G   D  T + +LSA                 
Sbjct: 223 SWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA----------------- 265

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
                             Y +CG ID A + F  +  ++   W +M+ G A++G  + AL
Sbjct: 266 ------------------YFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDAL 307

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSH-AGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
            LF +M L+   PD+ T   V+S+C+  A L      H K++  ++G+   L   S +VD
Sbjct: 308 LLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAV--IFGVDHDLLVSSALVD 365

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
           +  + GE         +M +T N + W +++
Sbjct: 366 MYSKCGETADAWIVFKRM-LTRNVISWNSMI 395



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 123/282 (43%), Gaps = 49/282 (17%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H +I+       VF+ N L N+Y + G L  A  LFD M ++N VSW  ++SGY
Sbjct: 172 KRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGY 231

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G      K+F EM  +G + ++  + ++L A  +CG                     
Sbjct: 232 LQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCG--------------------- 270

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
                              D A + F EI+ +D + W +++   +Q G       LF  M
Sbjct: 271 -----------------YIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREM 313

Query: 182 QREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
             E  R    P+ +T  S+++  A  +S+  G    Q +       G+  DL V SALV 
Sbjct: 314 LLENVR----PDNFTISSVVSSCARLASLCQG----QAVHGKAVIFGVDHDLLVSSALVD 365

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-RRKGKEVHG 280
            +++ G    A  +F++M+ +NV+S N ++ G  + GK++  
Sbjct: 366 MYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEA 407



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 146/324 (45%), Gaps = 23/324 (7%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            KLF  ++   G   D    + +++ Y + G +  A K F E+ +++ V W  ++ G   
Sbjct: 241 TKLF-CEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQ 299

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   +A  +F+EM+      + + + SV+ +C     +    G  VH   +      D 
Sbjct: 300 NGKEEDALLLFREMLLENVRPDNFTISSVVSSCARL--ASLCQGQAVHGKAVIFGVDHDL 357

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           LVS+ L+ MY  C E+ D A  +F+ + TR++ISWNS+I  Y+Q G  +    L+  M  
Sbjct: 358 LVSSALVDMYSKCGETAD-AWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLH 416

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVL----SGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           E    +LKP+  TF  +++A   + L     G +      ++ K  G+       S +++
Sbjct: 417 E----NLKPDNITFVGVLSACMHAGLVERGQGYF-----YSISKIHGMNPTFDHYSCMIN 467

Query: 240 GFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEV-HGYLIRSGLFDMVAVGNG- 296
              R G    A  + + M  + N +  + L+   R   +V +G +    LF++     G 
Sbjct: 468 LLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGP 527

Query: 297 ---LVNMYAKCGTIDDSRSVFRFM 317
              L N+YA CG   D  +V   M
Sbjct: 528 YIMLSNIYAACGRWKDVAAVRSLM 551


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 277/787 (35%), Positives = 441/787 (56%), Gaps = 51/787 (6%)

Query: 193 NEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK 252
           + +TF  +I A   S+  G  L + I  MV K GLL D++VG+AL++ + + G    A K
Sbjct: 30  DNFTFPCVIKACTGSLDRG--LGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVK 87

Query: 253 IFEQMIQKNVVSMNGLMEG----------------------------------------- 271
           +F  M  +N+VS N ++ G                                         
Sbjct: 88  VFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCARE 147

Query: 272 --RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
              + G  +HG  ++ GL + V V N LV+MY+KCG + +++ +F     K++VSWNTMI
Sbjct: 148 VDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMI 207

Query: 330 SGLDQNGCYEEAIMNFCAMR-RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
            GL   G   EA   F  M+ ++ +  +  ++++ L +C  +  +   +++HG  ++ G 
Sbjct: 208 GGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGF 267

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
             D  V+N  ++ YA  G L    +VF+ M      SWN++IG  A +     +A+  Y+
Sbjct: 268 QYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQN-GDPRKALNLYI 326

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            M  +G  P+  T  ++L A++     + G +VH  V+++ +  ++ I  +LLS Y  CG
Sbjct: 327 QMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCG 386

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
           E      +F  M E +  VSWN+MISGY  N L   A+ L   ++  G +       +VL
Sbjct: 387 ESSSARLLFDGM-EEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVL 445

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
            AC+  + L  G E H   ++A L  DV +  + +DMY+K G I  +   FD +  +++ 
Sbjct: 446 GACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLA 505

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           SWN++I+ Y  HG G++++ LF +M+  G +PD  TF+G+L+ CSHAGLV+EG K+F  M
Sbjct: 506 SWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEM 565

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT 748
              +G+ P+LE ++C++D+LGRAG LD     +++MP  P+S +W ++L  C   N  + 
Sbjct: 566 QNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFC--RNFGEL 623

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
           E+G+  A  L E+EP+N  NYV L+N+YA  G+W+DV + R+ +K+  ++K+AGCSW+ +
Sbjct: 624 EIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIEL 683

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
              VH FVAGD   P+   +    ++L +KM   GY P T   L D++ E K + +  HS
Sbjct: 684 GGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHS 743

Query: 869 EKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGK 927
           EK+A+ F L   +K   +RI KNLR+C DCH+A KF+S++ GREI++RD+ RFHHF DG 
Sbjct: 744 EKLAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGL 803

Query: 928 CSCGDYW 934
           CSCGDYW
Sbjct: 804 CSCGDYW 810



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 167/579 (28%), Positives = 278/579 (48%), Gaps = 61/579 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            ++ H  ++K G   DVF+ N LI +Y + G + +A K+F  MP RN VSW  I+SG++ 
Sbjct: 50  GEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSE 109

Query: 64  KGMSNEACKMFKEMV--RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
            G S +   M  EM+    G L +   L +VL  C        + G+++H L +K   + 
Sbjct: 110 NGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAR--EVDVQMGIRIHGLAVKLGLSE 167

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V+N L+ MY  C   T+ A+ +F++   ++ +SWN++I     +G     F LF  M
Sbjct: 168 DVRVNNSLVDMYSKCGYLTE-AQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREM 226

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           Q    +  ++ NE T  +++ A     +S    L+++     + G   D  V +  V+ +
Sbjct: 227 Q---MQEDIEVNEVTVLNILPACLE--ISQLRSLKELHGYSIRHGFQYDELVANGFVAAY 281

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG------------------------------ 271
           A+ G    A ++F  M  K V S N L+ G                              
Sbjct: 282 AKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIG 341

Query: 272 -----------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                       R GKEVHG+++R GL     +G  L+++Y  CG    +R +F  M  K
Sbjct: 342 SLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEK 401

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
            SVSWN MISG  QNG  E+A++ F  +  DG   S+ +++S L +C+    + LG++ H
Sbjct: 402 SSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETH 461

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF---ADSE 437
              LK  L  DV V+ + + +YA +G +     VF  +   D  SWN++I A+    D E
Sbjct: 462 CYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGE 521

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
               E+++ +  MR+ G  P+G TFI IL   S   + + G +   ++  ++   E  +E
Sbjct: 522 ----ESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFH-GIEPKLE 576

Query: 498 N--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           +   ++   G+ G +DD  ++   M E+ D   W+S++S
Sbjct: 577 HYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLS 615



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 171/622 (27%), Positives = 288/622 (46%), Gaps = 68/622 (10%)

Query: 66  MSNEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           + ++A  MF +++    F  + +    V++AC   G      G  +H +V+K     D  
Sbjct: 10  LYSDAIDMFVKLITDTEFNADNFTFPCVIKACT--GSLDRGLGEVIHGMVIKMGLLLDVF 67

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ-- 182
           V N LIAMYG      D A ++F  +  R+L+SWNSIIS +S+ G +   F +   M   
Sbjct: 68  VGNALIAMYGK-FGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAG 126

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            EG    L P+  T  +++      V     +  +I  +  K GL  D+ V ++LV  ++
Sbjct: 127 EEG----LLPDIATLVTVLPVCAREV--DVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYS 180

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG------------------------------- 271
           + G    A+ +F++  +KN VS N ++ G                               
Sbjct: 181 KCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVL 240

Query: 272 -----------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                       R  KE+HGY IR G      V NG V  YAKCG +  +  VF  M  K
Sbjct: 241 NILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETK 300

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
              SWN +I G  QNG   +A+  +  M   GL+   F++ S L + A L  +  G+++H
Sbjct: 301 TVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVH 360

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
           G  L+ GL+ D  +  +LLSLY   G  S    +F  M E   VSWN++I  ++ +  L 
Sbjct: 361 GFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQN-GLP 419

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
            +A+  +  +   G+ P+ +  +++L A S  S  +LG + H   +K  +  +  +  + 
Sbjct: 420 EDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACST 479

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY-IHNELLPKAMNLVWFMMQRGQRL 559
           +  Y K G + +   +F  + + +D  SWN++I+ Y +H +   +++ L   M + GQ  
Sbjct: 480 IDMYAKSGCIKESRSVFDGL-KNKDLASWNAIIAAYGVHGD-GEESIELFERMRKVGQMP 537

Query: 560 DHFTFATVLSACASVATLERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
           D FTF  +L+ C+    +E G++      +  G+   LE    +    +DM  + GR+D 
Sbjct: 538 DGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACV----MDMLGRAGRLDD 593

Query: 615 ASRFFDLMPVR-NVYSWNSMIS 635
           A R    MP + +   W+S++S
Sbjct: 594 ALRLVHEMPEQPDSRVWSSLLS 615



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 185/366 (50%), Gaps = 13/366 (3%)

Query: 334 QNGCYEEAIMNFCAMRRDG-LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
           +N  Y +AI  F  +  D    + NF+    + +C       LG+ IHG  +K+GL  DV
Sbjct: 7   RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV 66

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR- 451
            V NAL+++Y   G++   +KVF  MP  + VSWNS+I  F+++     +     ++M  
Sbjct: 67  FVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSEN-GFSKDCFDMLVEMMA 125

Query: 452 -RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
              G  P+  T + +L   +     ++G ++H   +K  ++ +  + N+L+  Y KCG +
Sbjct: 126 GEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYL 185

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM-MQRGQRLDHFTFATVLS 569
            + + +F + + R++ VSWN+MI G      + +A NL   M MQ    ++  T   +L 
Sbjct: 186 TEAQMLFDK-NNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILP 244

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           AC  ++ L    E+H   +R   ++D ++ +  V  Y+KCG +  A R F  M  + V S
Sbjct: 245 ACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNS 304

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           WN++I G A++G   KAL L+ QM   G +PD  T   +L A +H        K  +   
Sbjct: 305 WNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAH-------LKSLRYGK 357

Query: 690 QVYGLI 695
           +V+G +
Sbjct: 358 EVHGFV 363



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 166/327 (50%), Gaps = 27/327 (8%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  +L+HG   D F+  +L+++Y+  G+ +SA  LFD M +++SVSW  ++SGY+ 
Sbjct: 356 GKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQ 415

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+  +A  +F+++V  GF  +  A+ SVL AC +   S  + G + HC  LK+    D 
Sbjct: 416 NGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQ--QSALRLGKETHCYALKALLMEDV 473

Query: 124 LVSNVLIAMYGS--CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
            V+   I MY    C++ +   R +F+ ++ +DL SWN+II+ Y   GD     +LF RM
Sbjct: 474 FVACSTIDMYAKSGCIKES---RSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERM 530

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILA----MVKKAGLLSDLYVGSAL 237
           ++ G      P+ +TF  ++T     V S + L+++ L     M    G+   L   + +
Sbjct: 531 RKVG----QMPDGFTFIGILT-----VCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACV 581

Query: 238 VSGFARLGNFYYARKIFEQMIQK--NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA--V 293
           +    R G    A ++  +M ++  + V  + L   R  G+   G ++   L ++    V
Sbjct: 582 MDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNV 641

Query: 294 GN--GLVNMYAKCGTIDDSRSVFRFMI 318
            N   L N+YA  G  DD R V R MI
Sbjct: 642 ENYVSLSNLYAGSGRWDDVRRV-RQMI 667



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 133/268 (49%), Gaps = 9/268 (3%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H   ++HGF YD  + N  +  Y + G L  A ++F  M  +   SW  ++ G 
Sbjct: 253 RSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGC 312

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   +A  ++ +M  +G + + + +GS+L A         ++G +VH  VL+     
Sbjct: 313 AQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHL--KSLRYGKEVHGFVLRHGLEI 370

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  +   L+++Y  C ES+  AR +F+ +E +  +SWN++IS YSQ G       LF ++
Sbjct: 371 DSFIGISLLSLYIHCGESSS-ARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKL 429

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             +GF    +P++    S++ A   S  S   L ++      KA L+ D++V  + +  +
Sbjct: 430 VSDGF----QPSDIAVVSVLGAC--SQQSALRLGKETHCYALKALLMEDVFVACSTIDMY 483

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLM 269
           A+ G    +R +F+ +  K++ S N ++
Sbjct: 484 AKSGCIKESRSVFDGLKNKDLASWNAII 511



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 122/247 (49%), Gaps = 16/247 (6%)

Query: 539 NELLPKAMNL-VWFMMQRGQRLDHFTFATVLSACASVATLERGME--VHACGVRACLEFD 595
           NEL   A+++ V  +       D+FTF  V+ AC    +L+RG+   +H   ++  L  D
Sbjct: 8   NELYSDAIDMFVKLITDTEFNADNFTFPCVIKACT--GSLDRGLGEVIHGMVIKMGLLLD 65

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
           V +G+AL+ MY K G +D A + F  MPVRN+ SWNS+ISG++ +G       +  +M  
Sbjct: 66  VFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMA 125

Query: 656 --DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGE 713
             +G LPD  T V VL  C+    V  G +    ++   GL   +   + +VD+  + G 
Sbjct: 126 GEEGLLPDIATLVTVLPVCAREVDVQMGIR-IHGLAVKLGLSEDVRVNNSLVDMYSKCGY 184

Query: 714 LDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN--AVNYVL 771
           L + +   +K     N++ W T++G  C           +A N+  EM+ Q    VN V 
Sbjct: 185 LTEAQMLFDKNN-RKNAVSWNTMIGGLCTKG-----YIFEAFNLFREMQMQEDIEVNEVT 238

Query: 772 LANMYAS 778
           + N+  +
Sbjct: 239 VLNILPA 245


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 290/788 (36%), Positives = 447/788 (56%), Gaps = 76/788 (9%)

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY 213
           D+  WN  IS Y + G      ++F RM R                     +SSV   SY
Sbjct: 63  DIKEWNVAISSYMRTGRCNEALRVFKRMPR---------------------WSSV---SY 98

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR 273
                                + ++SG+ R G F  ARK+F++M ++++VS N +++G  
Sbjct: 99  ---------------------NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYV 137

Query: 274 KGKEVHGYLIRSGLFDM-----VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
           + + +        LF++     V   N +++ YA+ G +DD+RSVF  M  K+ VSWN +
Sbjct: 138 RNRNLGKA---RELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           +S   QN   EEA M F +         N++L+S   +C   G++   + +        +
Sbjct: 195 LSAYVQNSKMEEACMLFKS-------RENWALVSW--NCLLGGFVKKKKIVEARQFFDSM 245

Query: 389 D-SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
           +  DV   N +++ YA +G +    ++F   P  D  +W +++  +  +  +V EA + +
Sbjct: 246 NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNR-MVEEARELF 304

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
             M       N V++  +LA        ++  ++   +   NV    +  N +++ Y +C
Sbjct: 305 DKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNV----STWNTMITGYAQC 356

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
           G++ + + +F +M  +RD VSW +MI+GY  +    +A+ L   M + G RL+  +F++ 
Sbjct: 357 GKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSA 415

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           LS CA V  LE G ++H   V+   E    +G+AL+ MY KCG I+ A+  F  M  +++
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            SWN+MI+GY+RHG G+ AL  F  MK +G  PD  T V VLSACSH GLVD+G ++F +
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYT 535

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           M+Q YG++P  + ++CMVDLLGRAG L+     +  MP  P++ IW T+LGA  R +   
Sbjct: 536 MTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA-SRVHG-N 593

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
           TEL   AA+ +F MEP+N+  YVLL+N+YAS G+W DV K R  M++  VKK  G SW+ 
Sbjct: 594 TELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIE 653

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
           +++  H F  GDE HPEKD I+  L+EL+ +M+ AGYV +T   L D+E E KE +V YH
Sbjct: 654 IQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYH 713

Query: 868 SEKIAVAFVLTR-NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SE++AVA+ + R +S  PIR++KNLRVC DCH+A K++++I GR I+LRD+NRFHHF DG
Sbjct: 714 SERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDG 773

Query: 927 KCSCGDYW 934
            CSCGDYW
Sbjct: 774 SCSCGDYW 781



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 241/521 (46%), Gaps = 66/521 (12%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+   N +I  YVR  +L  A +LF+ MP+R+  SW  ++SGY   G  ++A  +F  M 
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP 184

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
                 N  +  ++L A  +         M+  C++ KS + +  +  N L+  +    +
Sbjct: 185 EK----NDVSWNALLSAYVQNSK------MEEACMLFKSRENWALVSWNCLLGGFVKKKK 234

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             + AR+ F+ +  RD++SWN+II+ Y+Q G      +LF                    
Sbjct: 235 IVE-ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE------------------ 275

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
                                        + D++  +A+VSG+ +      AR++F++M 
Sbjct: 276 ---------------------------SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP 308

Query: 259 QKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDM-----VAVGNGLVNMYAKCGTIDDSRSV 313
           ++N VS N ++ G  +G+ +    +   LFD+     V+  N ++  YA+CG I +++++
Sbjct: 309 ERNEVSWNAMLAGYVQGERME---MAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNL 365

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           F  M  +D VSW  MI+G  Q+G   EA+  F  M R+G   +  S  S LS+CA +  +
Sbjct: 366 FDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVAL 425

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
            LG+Q+HG  +K G ++   V NALL +Y   G +     +F  M   D VSWN++I  +
Sbjct: 426 ELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGY 485

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVAN 492
           +        A++++  M+R G  P+  T + +L+A S   +   G Q  +     Y V  
Sbjct: 486 S-RHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMP 544

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            +     ++   G+ G ++D   +   M    D   W +++
Sbjct: 545 NSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 145/304 (47%), Gaps = 20/304 (6%)

Query: 18  YDVFLC------NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           +DV  C      NT+I  Y + G ++ A  LFD+MP R+ VSWA +++GY+  G S EA 
Sbjct: 335 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEAL 394

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
           ++F +M R G  LNR +  S L  C +      + G Q+H  ++K        V N L+ 
Sbjct: 395 RLFVQMEREGGRLNRSSFSSALSTCADV--VALELGKQLHGRLVKGGYETGCFVGNALLL 452

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY  C  S + A  +F+E+  +D++SWN++I+ YS+ G      + F  M+REG    LK
Sbjct: 453 MYCKC-GSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG----LK 507

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           P++ T  ++++A   + L      Q    M +  G++ +    + +V    R G    A 
Sbjct: 508 PDDATMVAVLSACSHTGLVDKG-RQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAH 566

Query: 252 KIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCG 305
            + + M  +   ++ G + G  R  G           +F M    +G    L N+YA  G
Sbjct: 567 NLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSG 626

Query: 306 TIDD 309
              D
Sbjct: 627 RWGD 630



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 153/347 (44%), Gaps = 67/347 (19%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           Q+       DVF    +++ Y++   +  A +LFD+MP+RN VSW  +++GY       E
Sbjct: 271 QLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQ----GE 326

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
             +M KE+                                   +  ++  T+     N +
Sbjct: 327 RMEMAKEL--------------------------------FDVMPCRNVSTW-----NTM 349

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           I  Y  C + ++ A+ +F+++  RD +SW ++I+ YSQ G +    +LF +M+REG R  
Sbjct: 350 ITGYAQCGKISE-AKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL- 407

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
              N  +F S ++     V     L +Q+   + K G  +  +VG+AL+  + + G+   
Sbjct: 408 ---NRSSFSSALSTCADVV--ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462

Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY----------LIRSGLFDMVAVGNGLVN 299
           A  +F++M  K++VS N ++ G  +    HG+          + R GL    A    +++
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSR----HGFGEVALRFFESMKREGLKPDDATMVAVLS 518

Query: 300 MYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA 341
             +  G +D  R  F  M     +  +S  +  M+  L + G  E+A
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDA 565



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H +++K G+    F+ N L+ +Y + G +  A+ LF EM  ++ VSW  +++GY+ 
Sbjct: 428 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR 487

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G    A + F+ M R G   +   + +VL AC   G
Sbjct: 488 HGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTG 524



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 125/307 (40%), Gaps = 61/307 (19%)

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
           CG     E++V I S     Y + GR + A R F  MP  +  S+N MISGY R+G  + 
Sbjct: 59  CGDSDIKEWNVAISS-----YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFEL 113

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE--QFSC 703
           A  LF +M    P  D V++  ++      G V    ++     +++ ++P+ +   ++ 
Sbjct: 114 ARKLFDEM----PERDLVSWNVMIK-----GYVRN--RNLGKARELFEIMPERDVCSWNT 162

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA------------------------ 739
           M+    + G +D      ++MP   N + W  +L A                        
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMP-EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVS 221

Query: 740 --CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEV 797
             C      K +   +A      M  ++ V++  +   YA  GK   + +AR+   E+ V
Sbjct: 222 WNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGK---IDEARQLFDESPV 278

Query: 798 KKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD---AGYVPQTKF---- 850
           +     +W  M  G   ++        ++L ++K+ E N+   +   AGYV   +     
Sbjct: 279 QDV--FTWTAMVSG---YIQNRMVEEAREL-FDKMPERNEVSWNAMLAGYVQGERMEMAK 332

Query: 851 ALFDLEP 857
            LFD+ P
Sbjct: 333 ELFDVMP 339


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 266/668 (39%), Positives = 393/668 (58%), Gaps = 17/668 (2%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+ VH  L   GL         L NMY KC    D+R VF  M  +D V+WN +++G  +
Sbjct: 35  GRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMPSRDRVAWNAVVAGYAR 94

Query: 335 NGCYEEAIMNFCAMRRD--GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
           NG    A+     M+ +  G    + +L+S L +CA    +   +++H   L+ GLD  V
Sbjct: 95  NGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELV 154

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
           +VS A+L  Y   G +     VF  MP  + VSWN++I  +AD+    +EA+  +  M +
Sbjct: 155 NVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADN-GNATEAMALFWRMVQ 213

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGH-----QVHAQVIKYNVANETTIENALLSCYGKC 507
            G     VT  ++LAA  +   G+LG+     +VH  +++  +++  ++ NAL++ Y KC
Sbjct: 214 EGVD---VTDASVLAALQA--CGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKC 268

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
              D   ++F  +  ++  +SWN+MI G+  NE    A  L   M     R D FT  +V
Sbjct: 269 KRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSV 328

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           + A A ++   +   +H   +R  L+ DV + +AL+DMYSKCGR+  A R FD    R+V
Sbjct: 329 IPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHV 388

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            +WN+MI GY  HG G  A+ LF +MK  G LP+  TF+ VL+ACSHAGLVDEG K+F S
Sbjct: 389 ITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFAS 448

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           M + YGL P +E +  MVDLLGRAG+LD+   FI  MPI P   ++  +LGAC     + 
Sbjct: 449 MKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLH--KN 506

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
            EL  ++A ++FE+ P+  V +VLLAN+YA+   W+DVA+ R AM++  ++K  G S + 
Sbjct: 507 VELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQ 566

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
           +K+ VH F +G  +H     IY +L +L ++++D GYVP T  ++ D+E + K  L++ H
Sbjct: 567 LKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDTD-SIHDVEDDVKAQLLNTH 625

Query: 868 SEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SEK+A+A+ L R +    I+I KNLRVC DCH+A K IS + GREI++RD  RFHHF DG
Sbjct: 626 SEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDG 685

Query: 927 KCSCGDYW 934
           KCSCGDYW
Sbjct: 686 KCSCGDYW 693



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 161/318 (50%), Gaps = 5/318 (1%)

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           +  + L  CA+   +  G+ +H +    GL S+   S AL ++Y      +   +VF  M
Sbjct: 18  TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR--RAGWSPNGVTFINILAAASSFSMGK 476
           P  D+V+WN+V+  +A +  L S A++  + M+    G  P+ VT +++L A +      
Sbjct: 78  PSRDRVAWNAVVAGYARN-GLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALH 136

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY 536
              +VHA  ++  +     +  A+L  Y KCG ++    +F  M   R+ VSWN+MI GY
Sbjct: 137 ACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPV-RNSVSWNAMIDGY 195

Query: 537 IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
             N    +AM L W M+Q G  +   +    L AC  +  L+    VH   VR  L  +V
Sbjct: 196 ADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNV 255

Query: 597 VIGSALVDMYSKCGRIDYASRFF-DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
            + +AL+  Y+KC R D A++ F +L   +   SWN+MI G+ ++   + A  LF++M+L
Sbjct: 256 SVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQL 315

Query: 656 DGPLPDHVTFVGVLSACS 673
           +   PD  T V V+ A +
Sbjct: 316 ENVRPDSFTLVSVIPAVA 333



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 144/287 (50%), Gaps = 4/287 (1%)

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           TF  +L   ++ +    G  VHAQ+    +A+E+    AL + Y KC    D  ++F RM
Sbjct: 18  TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMM--QRGQRLDHFTFATVLSACASVATLE 578
              RD V+WN++++GY  N L   AM  V  M   + G+R D  T  +VL ACA    L 
Sbjct: 78  PS-RDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALH 136

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
              EVHA  +RA L+  V + +A++D Y KCG ++ A   FD MPVRN  SWN+MI GYA
Sbjct: 137 ACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYA 196

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
            +G+  +A+ LF +M  +G      + +  L AC   G +DE  +  + + +V GL   +
Sbjct: 197 DNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRV-GLSSNV 255

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANC 745
              + ++    +    D   +  N++      + W  ++    +  C
Sbjct: 256 SVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNEC 302



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 117/478 (24%), Positives = 209/478 (43%), Gaps = 63/478 (13%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H Q+   G A +      L N+Y +    A A ++FD MP R+ V+W  +V+GY   
Sbjct: 36  RAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMPSRDRVAWNAVVAGYARN 95

Query: 65  GMSNEACKMFKEMV--RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
           G+ + A +    M     G   +   L SVL AC +          +VH   L++    D
Sbjct: 96  GLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADA--RALHACREVHAFALRAG--LD 151

Query: 123 GL--VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            L  VS  ++  Y  C  + + AR +F+ +  R+ +SWN++I  Y+  G+      LF R
Sbjct: 152 ELVNVSTAVLDAYCKC-GAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWR 210

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL--LQQILAMVKKAGLLSDLYVGSALV 238
           M +EG        + T  S++ AA  +     YL  ++++  ++ + GL S++ V +AL+
Sbjct: 211 MVQEGV-------DVTDASVL-AALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALI 262

Query: 239 SGFARLGNFYYARKIFEQMIQKNV-VSMNGLMEG-------------------------- 271
           + +A+      A ++F ++  K   +S N ++ G                          
Sbjct: 263 TTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDS 322

Query: 272 ---------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                            + + +HGY IR  L   V V   L++MY+KCG +  +R +F  
Sbjct: 323 FTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDS 382

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
              +  ++WN MI G   +G  + A+  F  M+  G + +  + +S L++C+  G +  G
Sbjct: 383 ARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEG 442

Query: 377 QQIHGEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
           Q+      K  GL+  +     ++ L   AG L         MP    +S + +++GA
Sbjct: 443 QKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGA 500



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 140/278 (50%), Gaps = 20/278 (7%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINV-------YVRVGDLASASKLFDEMPDRNSVSWA 55
           DA+  H     H FA    L + L+NV       Y + G + +A  +FD MP RNSVSW 
Sbjct: 131 DARALHACREVHAFALRAGL-DELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWN 189

Query: 56  CIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGM-QVHCLV 114
            ++ GY   G + EA  +F  MV+ G  +      SVL A Q CG  G+   + +VH L+
Sbjct: 190 AMIDGYADNGNATEAMALFWRMVQEGVDVTD---ASVLAALQACGELGYLDEVRRVHELL 246

Query: 115 LKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI-ETRDLISWNSIISVYSQRGDTIS 173
           ++   + +  V+N LI  Y  C +  D A ++F E+   +  ISWN++I  ++Q      
Sbjct: 247 VRVGLSSNVSVTNALITTYAKC-KRADLAAQVFNELGNKKTRISWNAMILGFTQNECPED 305

Query: 174 VFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYV 233
             +LF+RMQ E  R    P+ +T  S+I A     +S     + I     +  L  D+YV
Sbjct: 306 AERLFARMQLENVR----PDSFTLVSVIPAVAD--ISDPLQARWIHGYSIRHQLDQDVYV 359

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
            +AL+  +++ G    AR++F+    ++V++ N ++ G
Sbjct: 360 LTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHG 397



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 51/97 (52%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H   ++H    DV++   LI++Y + G ++ A +LFD   DR+ ++W  ++ GY  
Sbjct: 341 ARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGS 400

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G    A ++F+EM   G L N     SVL AC   G
Sbjct: 401 HGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAG 437


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 263/666 (39%), Positives = 404/666 (60%), Gaps = 8/666 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVA-VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
           R G+ +H  L+ SG       + N L+ MY+ C  +  +  +F  M   + VSW T++SG
Sbjct: 34  RLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSG 93

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
           L QN  + +A+  F +M R GL+ + F+L S   + A+L     G Q+H  G++LG D++
Sbjct: 94  LTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLGFDAE 153

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           + V++ L  +Y+ +G L    +VF  MP+ D V+W ++I  +A +  L   AV  + DMR
Sbjct: 154 LFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNL-EAAVIAFRDMR 212

Query: 452 RAGW-SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
           R G    +     ++L+A+     G L   +H+ V+K     E  + NAL   Y K  +M
Sbjct: 213 REGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADM 272

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
           D+  ++        + VS  S+I GYI  + + KA+ +   + ++G   + FTF++++  
Sbjct: 273 DNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKG 332

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
           CA  A LE+G ++HA  ++  L  D  + S L+DMY KCG I  + + F  +      +W
Sbjct: 333 CAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAW 392

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           N+ I+  A+HGHG +A+  F +M   G  P+H+TFV +L+ACSHAGLVDEG K+F SM  
Sbjct: 393 NAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKD 452

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTE 749
            +G+ P+ E +SC++D+ GRAG LD+ E+FI +MP+ PN+  W ++LGAC  R N    E
Sbjct: 453 HHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGN---KE 509

Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMK 809
           LG  AA+ + ++EP N   +V L+ +YAS G+WEDV   RK M++  +KK  G SWV   
Sbjct: 510 LGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDSN 569

Query: 810 DGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSE 869
              HVF + D SHP+++ IYEKL+EL +++++ GYVP T+F   +LE  +K+ ++ YHSE
Sbjct: 570 KKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCNLEDTAKQRILRYHSE 629

Query: 870 KIAVAFVL-TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKC 928
           +IAVAF L +  +  PI + KNLR+C DCHSA KFISK+  R+I++RD++RFHHF  G C
Sbjct: 630 RIAVAFALISMPATKPIIVKKNLRICADCHSALKFISKVENRDIIVRDNSRFHHFVKGGC 689

Query: 929 SCGDYW 934
           SCGDYW
Sbjct: 690 SCGDYW 695



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 222/488 (45%), Gaps = 64/488 (13%)

Query: 97  QECGPSG-FKFGMQVHC-LVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRD 154
           Q CG +G  + G  +H  LVL         ++N LI MY  C +    A R+F+ +   +
Sbjct: 25  QSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCAD-VPSAVRLFDAMPRPN 83

Query: 155 LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL 214
           L+SW +++S  +Q          FS M R G    L P +  F     A  ++ L+  + 
Sbjct: 84  LVSWTTLVSGLTQNSMHRDALAAFSSMCRAG----LVPTQ--FALSSAARAAAALAARHA 137

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--- 271
             Q+  +  + G  ++L+V S L   +++ G    A ++F+QM QK+ V+   +++G   
Sbjct: 138 GAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAK 197

Query: 272 --------------RRKG-------------------------KEVHGYLIRSGLFDMVA 292
                         RR+G                         + +H  +++SG    VA
Sbjct: 198 NGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVA 257

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGK-DSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           V N L +MYAK   +D++  V +   G  + VS  ++I G  +  C E+A++ F  +RR 
Sbjct: 258 VRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQ 317

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G+  + F+  S +  CA    +  G Q+H E +K  L SD  VS+ LL +Y   G +S  
Sbjct: 318 GVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLS 377

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
           +++F  +  H  ++WN+ I   A       EA++ +  M  +G  PN +TF+++L A S 
Sbjct: 378 IQLFKEIEYHTDIAWNAAINVLA-QHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSH 436

Query: 472 FSMGKLGHQVHAQVIKYNVANETTIE------NALLSCYGKCGEMDDCEKIFARMSERRD 525
             +   G +       Y++ +   IE      + ++  YG+ G +D+ EK    M  + +
Sbjct: 437 AGLVDEGLKYF-----YSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPN 491

Query: 526 EVSWNSMI 533
              W S++
Sbjct: 492 AYGWCSLL 499



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 128/474 (27%), Positives = 215/474 (45%), Gaps = 68/474 (14%)

Query: 11  ILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEA 70
           +L    A   FL N LI +Y    D+ SA +LFD MP  N VSW  +VSG T   M  +A
Sbjct: 44  VLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDA 103

Query: 71  CKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLI 130
              F  M RAG +  ++AL S  RA      +    G Q+HC+ ++     +  V++ L 
Sbjct: 104 LAAFSSMCRAGLVPTQFALSSAARAAAA--LAARHAGAQLHCVGVRLGFDAELFVASNLA 161

Query: 131 AMYG-SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
            MY  S L    C  R+F+++  +D ++W ++I  Y++ G+  +    F  M+REG    
Sbjct: 162 DMYSKSGLLVEAC--RVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGL--- 216

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
           +  +++   S+++A  S  L   +L + I + V K+G   ++ V +AL   +A+  +   
Sbjct: 217 VGADQHVLCSVLSA--SGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDN 274

Query: 250 ARKIFE-QMIQKNVVSMNGLMEG-----------------RRKGKE-------------- 277
           A ++ +      NVVS   L++G                 RR+G E              
Sbjct: 275 AARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCA 334

Query: 278 ----------VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
                     +H  +I++ L     V + L++MY KCG I  S  +F+ +     ++WN 
Sbjct: 335 MQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNA 394

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL- 386
            I+ L Q+G   EAI  F  M   G+  ++ + +S L++C+  G +        EGLK  
Sbjct: 395 AINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLV-------DEGLKYF 447

Query: 387 -------GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                  G++      + ++ +Y  AG L    K    MP + +   W S++GA
Sbjct: 448 YSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGA 501



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 132/266 (49%), Gaps = 17/266 (6%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   ++ GF  ++F+ + L ++Y + G L  A ++FD+MP +++V+W  ++ GY   G 
Sbjct: 141 LHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGN 200

Query: 67  SNEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFG---MQVHCLVLKSNQTFD 122
              A   F++M R G +  +++ L SVL A       G K G     +H  V+KS    +
Sbjct: 201 LEAAVIAFRDMRREGLVGADQHVLCSVLSA-----SGGLKDGWLARAIHSCVMKSGFEQE 255

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V N L  MY    +  + AR +  +  + +++S  S+I  Y +         +F  ++
Sbjct: 256 VAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELR 315

Query: 183 REGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           R+G    ++PNE+TF S+I   A  ++L       Q+ A V K  L+SD +V S L+  +
Sbjct: 316 RQG----VEPNEFTFSSMIKGCAMQALLEQG---AQLHAEVIKTSLISDSFVSSTLLDMY 368

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNG 267
            + G    + ++F+++     ++ N 
Sbjct: 369 GKCGLISLSIQLFKEIEYHTDIAWNA 394


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 306/890 (34%), Positives = 447/890 (50%), Gaps = 173/890 (19%)

Query: 48  DRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFG 107
           D + V W   +S Y  KG    A  +F  M R                            
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFNGMRR---------------------------- 88

Query: 108 MQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQ 167
                   +S  T++ ++S  L           DCAR++FE++  RDLISWN ++S Y +
Sbjct: 89  --------RSTVTYNAMISGYL------SNNKFDCARKVFEKMPDRDLISWNVMLSGYVK 134

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
            G+  +   LF++M  +                                           
Sbjct: 135 NGNLSAARALFNQMPEK------------------------------------------- 151

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHG--YLIRS 285
             D+   +A++SGFA+ G    ARKIF+QM+ KN +S NGL+    +   +     L  S
Sbjct: 152 --DVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDS 209

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
            +   +   N L+  Y +   +DD+RS+F  M  +D +SWN MI+G  QN          
Sbjct: 210 KMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQN---------- 259

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
                 GL+S    L   L       W                        A++S +   
Sbjct: 260 ------GLLSEARRLFEELPIRDVFAW-----------------------TAMVSGFVQN 290

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
           G L    ++F  MPE ++VSWN++I  +  S+ +  E  +   D                
Sbjct: 291 GMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQI--EKARELFD---------------- 332

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
                             Q+   N    T+  N +++ Y +CG +D  + +F  M +R D
Sbjct: 333 ------------------QMPSRN----TSSWNTMVTGYAQCGNIDQAKILFDEMPQR-D 369

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
            +SW +MISGY  +    +A++L   M + G  L+    A  LS+CA +A LE G ++H 
Sbjct: 370 CISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHG 429

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
             V+A  +   + G+AL+ MY KCG I+ A   F+ +  +++ SWN+MI+GYARHG G +
Sbjct: 430 RLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKE 489

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
           AL LF  MK+    PD VT VGVLSACSH GLVD+G ++F SM Q YG+    + ++CM+
Sbjct: 490 ALALFESMKMTIK-PDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMI 548

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN 765
           DLLGRAG LD+    +  MP  P++  W  +LGA  R +   TELG KAA  +FEMEP N
Sbjct: 549 DLLGRAGRLDEALNLMKSMPFYPDAATWGALLGAS-RIHG-DTELGEKAAEKVFEMEPDN 606

Query: 766 AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
           +  YVLL+N+YA+ G+W +V + R  M++  VKK  G SWV +++  H+F  GD SHPE 
Sbjct: 607 SGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEA 666

Query: 826 DLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLP 884
           + IY  L+EL+ +++  G+V  TK  L D+E E KE ++ YHSEK+AVAF +L+     P
Sbjct: 667 ERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRP 726

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           IR++KNLRVC DCH+A K ISKI  R+I++RDSNRFHHF++G CSCGDYW
Sbjct: 727 IRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 148/543 (27%), Positives = 254/543 (46%), Gaps = 70/543 (12%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+   N +++ YV+ G+L++A  LF++MP+++ VSW  ++SG+   G   EA K+F +M+
Sbjct: 121 DLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML 180

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
               + N  +   +L A  + G       ++    +  S   ++ +  N L+  Y    +
Sbjct: 181 ----VKNEISWNGLLSAYVQNGR------IEDARRLFDSKMDWEIVSWNCLMGGYVR-KK 229

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             D AR +F+ +  RD ISWN +I+ Y+Q G      +LF  +                 
Sbjct: 230 RLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELP---------------- 273

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
                                        + D++  +A+VSGF + G    A +IFE+M 
Sbjct: 274 -----------------------------IRDVFAWTAMVSGFVQNGMLDEATRIFEEMP 304

Query: 259 QKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMV-----AVGNGLVNMYAKCGTIDDSRSV 313
           +KN VS N ++ G  + +++        LFD +     +  N +V  YA+CG ID ++ +
Sbjct: 305 EKNEVSWNAMIAGYVQSQQIEKA---RELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKIL 361

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           F  M  +D +SW  MISG  Q+G  EEA+  F  M+RDG + +  +L   LSSCA +  +
Sbjct: 362 FDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAAL 421

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
            LG+Q+HG  +K G  +     NALL++Y   G +     VF  + E D VSWN++I  +
Sbjct: 422 ELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGY 481

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVAN 492
           A       EA+  +  M+     P+ VT + +L+A S   +   G +  ++    Y +  
Sbjct: 482 A-RHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITA 539

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI-SGYIH--NELLPKAMNLV 549
                  ++   G+ G +D+   +   M    D  +W +++ +  IH   EL  KA   V
Sbjct: 540 NAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKV 599

Query: 550 WFM 552
           + M
Sbjct: 600 FEM 602



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 146/296 (49%), Gaps = 15/296 (5%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           NT++  Y + G++  A  LFDEMP R+ +SWA ++SGY   G S EA  +F +M R G +
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           LNR AL   L +C E   +  + G Q+H  ++K+      +  N L+AMYG C  S + A
Sbjct: 403 LNRSALACALSSCAEI--AALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKC-GSIEEA 459

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
             +FE+I  +D++SWN++I+ Y++ G       LF     E  + ++KP++ T   +++A
Sbjct: 460 FDVFEDITEKDIVSWNTMIAGYARHGFGKEALALF-----ESMKMTIKPDDVTLVGVLSA 514

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNV 262
              + L     ++   +M +  G+ ++    + ++    R G    A  + + M    + 
Sbjct: 515 CSHTGLVDKG-MEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDA 573

Query: 263 VSMNGLMEGRR-KGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSV 313
            +   L+   R  G    G      +F+M    +G    L N+YA  G   + R +
Sbjct: 574 ATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREM 629



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 190/437 (43%), Gaps = 76/437 (17%)

Query: 18  YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM 77
           +++   N L+  YVR   L  A  LFD MP R+ +SW  +++GY   G+ +EA ++F+E+
Sbjct: 213 WEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL 272

Query: 78  ---------------VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                          V+ G L     +   +    E   +    G      + K+ + FD
Sbjct: 273 PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFD 332

Query: 123 GLVS------NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
            + S      N ++  Y  C  + D A+ +F+E+  RD ISW ++IS Y+Q G +     
Sbjct: 333 QMPSRNTSSWNTMVTGYAQC-GNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALH 391

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY------LLQQILAMVKKAGLLSD 230
           LF +M+R+G            G L  +A +  LS         L +Q+   + KAG  + 
Sbjct: 392 LFIKMKRDG------------GILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTG 439

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---GKEVHGYLIRSGL 287
              G+AL++ + + G+   A  +FE + +K++VS N ++ G  +   GKE    L  S  
Sbjct: 440 YIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALA-LFESMK 498

Query: 288 FDMVAVGNGLVNMYAKC---GTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYE 339
             +      LV + + C   G +D     F  M     I  ++  +  MI  L + G  +
Sbjct: 499 MTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLD 558

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG---------LDS 390
           EA+          LM S    +      A+ G ++   +IHG+  +LG         ++ 
Sbjct: 559 EAL---------NLMKS----MPFYPDAATWGALLGASRIHGD-TELGEKAAEKVFEMEP 604

Query: 391 DVSVSNALLS-LYADAG 406
           D S    LLS LYA +G
Sbjct: 605 DNSGMYVLLSNLYAASG 621



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H +++K GF       N L+ +Y + G +  A  +F+++ +++ VSW  +++GY  
Sbjct: 424 GKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYAR 483

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G   EA  +F+ M +     +   L  VL AC   G
Sbjct: 484 HGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTG 519



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 62/300 (20%), Positives = 120/300 (40%), Gaps = 54/300 (18%)

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
           ++ D+V  +  +  Y + G+ + A   F+ M  R+  ++N+MISGY  +   D A  +F 
Sbjct: 56  VDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFE 115

Query: 652 QMK----------LDG-----------------PLPDHVTFVGVLSACSHAGLVDEGFKH 684
           +M           L G                 P  D V++  +LS  +  G V+E  K 
Sbjct: 116 KMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKI 175

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           F  M     L+     ++ ++    + G ++      +      + + W  V   C    
Sbjct: 176 FDQM-----LVKNEISWNGLLSAYVQNGRIEDARRLFD------SKMDWEIVSWNCLMGG 224

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
             + +    A ++   M  ++ +++ ++   YA  G    +++AR+  +E  ++     +
Sbjct: 225 YVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGL---LSEARRLFEELPIRDV--FA 279

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD---AGYVPQTKF----ALFDLEP 857
           W  M  G   FV  +    E   I+E++ E N+   +   AGYV   +      LFD  P
Sbjct: 280 WTAMVSG---FVQ-NGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMP 335


>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
 gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
          Length = 631

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 263/638 (41%), Positives = 387/638 (60%), Gaps = 10/638 (1%)

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
           MY+K    + ++ + +    +  V+W  +ISG  QNG +  A++ F  MRR+ +  ++F+
Sbjct: 1   MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
                 +  +L     G+QIH   LKLG  +D  V  +   +Y+  G      ++F  MP
Sbjct: 61  FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             +   WN+ I + A  +    +A+  +++ RR G  P+ +TF   L A +      LG 
Sbjct: 121 PRNVAVWNAYI-SNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGR 179

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           Q+H  VI+     + ++ N ++  YGKC E++  E +F  M  RR+ VSW +M++    N
Sbjct: 180 QLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMG-RRNSVSWCTMVAACEQN 238

Query: 540 ELLPKAMNLVWFMMQR--GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
           +   KA   V F+M R  G  L  +  ++V+SA A ++ LE G  VHA  V+AC+E D+ 
Sbjct: 239 DEKEKA--CVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIF 296

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           +GSALVDMY KCG I+   + F  MP RN+ SWN+MISGYA  G  D A+TLF +M+ + 
Sbjct: 297 VGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEA 356

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
            + ++VT + VLSACS  G V  G + F+SM   Y + P  E ++C+ D+LGRAG +++ 
Sbjct: 357 -VANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERA 415

Query: 718 EEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYA 777
            EF+ KMPI P   +W  +L AC      + ELG+ AA+ LF+++P+++ N+VLL+NM+A
Sbjct: 416 YEFVQKMPIRPTISVWGALLNACRVYG--EPELGKIAADNLFKLDPKDSGNHVLLSNMFA 473

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
           + G+W++    RK MK+  +KK AGCSWVT K+ VHVF A D SH     I   L +L  
Sbjct: 474 AAGRWDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRT 533

Query: 838 KMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGD 896
           +M+ AGY+P T +AL+DLE E K   V YHSEKIA+AF ++     +PIRI KNLR+CGD
Sbjct: 534 EMQAAGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGD 593

Query: 897 CHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CHSAFKFIS IVGREI++RD+NRFH F D +CSC D+W
Sbjct: 594 CHSAFKFISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 222/446 (49%), Gaps = 51/446 (11%)

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY S L+  + A+ + +   TR +++W ++IS   Q G   S    FS+M+RE    ++K
Sbjct: 1   MY-SKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRE----NIK 55

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           PN++TF     A  S+ L   +  +QI A+  K G ++D +VG +    +++ G  + A+
Sbjct: 56  PNDFTFPCAFKA--STALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQ 113

Query: 252 KIFEQMIQKNVVSM-----NGLMEGRRK-------------------------------- 274
           ++F++M  +NV        N +++GR                                  
Sbjct: 114 RLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADAR 173

Query: 275 ----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
               G+++HG +IRSG    V+V NG++++Y KC  ++ +  VF  M  ++SVSW TM++
Sbjct: 174 CLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVA 233

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
             +QN   E+A + F   R++G+  +++ + S +S+ A +  +  G+ +H   +K  ++ 
Sbjct: 234 ACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEG 293

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           D+ V +AL+ +Y   G +  C +VF  MPE + VSWN++I  +A  +  V  A+  + +M
Sbjct: 294 DIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYA-HQGDVDMAMTLFEEM 352

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGE 509
           +    + N VT I +L+A S     KLG+++   +  +Y +         +    G+ G 
Sbjct: 353 QSEAVA-NYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGM 411

Query: 510 MDDCEKIFARMSERRDEVSWNSMISG 535
           ++   +   +M  R     W ++++ 
Sbjct: 412 VERAYEFVQKMPIRPTISVWGALLNA 437



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 221/473 (46%), Gaps = 24/473 (5%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------GKEVHGYLIR 284
           +AL+SG  + G F  A   F +M ++N+   +       K          GK++H   ++
Sbjct: 27  TALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTALCLPFAGKQIHAIALK 86

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
            G  +   VG    +MY+K G   +++ +F  M  ++   WN  IS    +G   +AI  
Sbjct: 87  LGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDK 146

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F   RR G      +  + L++CA    + LG+Q+HG  ++ G + DVSV+N ++ +Y  
Sbjct: 147 FIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGK 206

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
              +     VF  M   + VSW +++ A   ++    +A   +L  R+ G         +
Sbjct: 207 CKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDE-KEKACVVFLMGRKEGIELTDYMVSS 265

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           +++A +  S  + G  VHA  +K  V  +  + +AL+  YGKCG ++DCE++F  M E R
Sbjct: 266 VISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPE-R 324

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV- 583
           + VSWN+MISGY H   +  AM L +  MQ     ++ T   VLSAC+    ++ G E+ 
Sbjct: 325 NLVSWNAMISGYAHQGDVDMAMTL-FEEMQSEAVANYVTLICVLSACSRGGAVKLGNEIF 383

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYARHGH 642
            +   R  +E      + + DM  + G ++ A  F   MP+R   S W ++++    +G 
Sbjct: 384 ESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGE 443

Query: 643 GD----KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
            +     A  LF     D    +HV    + +A   AG  DE     K M  V
Sbjct: 444 PELGKIAADNLFKLDPKDS--GNHVLLSNMFAA---AGRWDEATLVRKEMKDV 491



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 123/497 (24%), Positives = 215/497 (43%), Gaps = 73/497 (14%)

Query: 35  DLASASKLFDEM-PDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVL 93
           DL + ++L  ++ P R  V+W  ++SG    G  + A   F +M R     N +      
Sbjct: 6   DLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAF 65

Query: 94  RACQE-CGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIET 152
           +A    C P     G Q+H + LK  Q  D  V      MY       + A+R+F+E+  
Sbjct: 66  KASTALCLPFA---GKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFE-AQRLFDEMPP 121

Query: 153 RDLISWNSIIS---VYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSV 208
           R++  WN+ IS   +  + G  I  F  F R+  E       P+  TF + + A A +  
Sbjct: 122 RNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGE-------PDLITFCAFLNACADARC 174

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
           L    L +Q+  +V ++G   D+ V + ++  + +      A  +F  M ++N VS   +
Sbjct: 175 LD---LGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTM 231

Query: 269 ME-----------------GRRKGKEVHGYLIRS------GLFDM--------------- 290
           +                  GR++G E+  Y++ S      G+  +               
Sbjct: 232 VAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACV 291

Query: 291 ---VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
              + VG+ LV+MY KCG+I+D   VF  M  ++ VSWN MISG    G  + A+  F  
Sbjct: 292 EGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEE 351

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL--KLGLDSDVSVSNALLSLYADA 405
           M+ + + ++  +LI  LS+C+  G + LG +I  E +  +  ++        +  +   A
Sbjct: 352 MQSEAV-ANYVTLICVLSACSRGGAVKLGNEIF-ESMRDRYRIEPGAEHYACIADMLGRA 409

Query: 406 GYLSRCLKVFFLMPEHDQVS-WNSVIGA---FADSE-ALVSEAVKYYLDMRRAGWSPNGV 460
           G + R  +    MP    +S W +++ A   + + E   ++    + LD + +G   N V
Sbjct: 410 GMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSG---NHV 466

Query: 461 TFINILAAASSFSMGKL 477
              N+ AAA  +    L
Sbjct: 467 LLSNMFAAAGRWDEATL 483



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 149/321 (46%), Gaps = 19/321 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H  +++ GF  DV + N +I+VY +  ++  A  +F+ M  RNSVSW  +V+     
Sbjct: 179 RQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQN 238

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
               +AC +F    + G  L  Y + SV+ A    G SG +FG  VH L +K+    D  
Sbjct: 239 DEKEKACVVFLMGRKEGIELTDYMVSSVISA--YAGISGLEFGRSVHALAVKACVEGDIF 296

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V + L+ MYG C    DC  ++F E+  R+L+SWN++IS Y+ +GD      LF  MQ E
Sbjct: 297 VGSALVDMYGKCGSIEDC-EQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSE 355

Query: 185 GFRYSLKPNEYTFGSLITAAY--SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
                   N  T   +++A     +V  G+ + +   +M  +  +       + +     
Sbjct: 356 AV-----ANYVTLICVLSACSRGGAVKLGNEIFE---SMRDRYRIEPGAEHYACIADMLG 407

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNG--LMEGRRKGKEVHGYLIRSGLFDMVAVGNG---- 296
           R G    A +  ++M  +  +S+ G  L   R  G+   G +    LF +    +G    
Sbjct: 408 RAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVL 467

Query: 297 LVNMYAKCGTIDDSRSVFRFM 317
           L NM+A  G  D++  V + M
Sbjct: 468 LSNMFAAAGRWDEATLVRKEM 488


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 296/876 (33%), Positives = 463/876 (52%), Gaps = 58/876 (6%)

Query: 107 GMQVHCLVLKS---NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS 163
           G QVH   + +   N+  DG ++  L+ MYG C    D ARR+F  +  R + SWN+++ 
Sbjct: 76  GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDD-ARRLFNGMPARTVFSWNALVG 134

Query: 164 VYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVK 223
            Y   G      +++  M+      S  P+  T  S++ A  +          ++  +  
Sbjct: 135 AYLSSGSAGEAMRVYGAMRASAAPGS-APDGCTLASVLKACGAE--GDGRCGGEVHGLAV 191

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ--KNVVSMNGLMEGRRK------- 274
           K GL     V +AL+  +A+ G    A ++FE + Q  ++V S N ++ G  +       
Sbjct: 192 KVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEA 251

Query: 275 ----------------------------------GKEVHGYLIRSGLFDMVAVGNGLVNM 300
                                             G+E+H  L++ G  ++    N L+ M
Sbjct: 252 LALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCG-SELNIQCNALLVM 310

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           YAK G +D +  VF  +  KD +SWN+M+S   QN  Y EAI  F  M + G    +  +
Sbjct: 311 YAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACV 370

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           +S  S+   L  +  G++ H   +K  L +D+ V N L+ +Y   G +    KVF  M  
Sbjct: 371 VSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGI 430

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            D +SW +++  FA S +  SEA++  L++++ G   + +   +IL          L  Q
Sbjct: 431 RDHISWTTILACFAQS-SRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQ 489

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           VH   I+ N   +  +EN L+  YG+CGE D    +F R+ E++D VSW SMI+   +N 
Sbjct: 490 VHCYAIR-NGLLDLILENRLIDIYGECGEFDHSLNLFQRV-EKKDIVSWTSMINCCTNNG 547

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
            L  A+ L   M +   + D     ++L A A +++L +G +VH   +R     +  + S
Sbjct: 548 RLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVS 607

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           +LVDMYS CG ++YA R F+    ++V  W +MI+    HGHG +A+ LF +M   G  P
Sbjct: 608 SLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTP 667

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           DHV+F+ +L ACSH+ LV+EG  +   M   Y L P  E ++C+VD+LGR+G+ ++  EF
Sbjct: 668 DHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEF 727

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           I  MP+ P S +W  +LGA CR + R   L   AAN L E+EP N  NY+L++N++A  G
Sbjct: 728 IKTMPMDPKSAVWCALLGA-CRVH-RNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMG 785

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM- 839
           KW +  + R  M E  ++K   CSW+ + + +H F +GD  H + + I+ KL E+ + + 
Sbjct: 786 KWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLR 845

Query: 840 RDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCH 898
           R+ GYV  T+F L D   E K D++  HSE+IA+AF +++    +PIRI KNLRVCGDCH
Sbjct: 846 REGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCH 905

Query: 899 SAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
              K +SK+  R+IV+RD+NRFHHF+ G CSC D+W
Sbjct: 906 EFTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 190/665 (28%), Positives = 311/665 (46%), Gaps = 84/665 (12%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM- 77
           D FL   L+ +Y R G +  A +LF+ MP R   SW  +V  Y   G + EA +++  M 
Sbjct: 94  DGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMR 153

Query: 78  --VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS 135
                G   +   L SVL+AC   G    + G +VH L +K       LV+N LI MY  
Sbjct: 154 ASAAPGSAPDGCTLASVLKACGAEGDG--RCGGEVHGLAVKVGLDKSTLVANALIGMYAK 211

Query: 136 CLESTDCARRIFE--EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPN 193
           C    D A R+FE  + + RD+ SWNS++S   Q G T+    LF  MQ  GF      N
Sbjct: 212 C-GLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPM----N 266

Query: 194 EYT-FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVG-SALVSGFARLGNFYYAR 251
            YT    L   A   +LS   L +++ A + K G  S+L +  +AL+  +A+ G    A 
Sbjct: 267 SYTSVAVLQVCAELGLLS---LGRELHAALLKCG--SELNIQCNALLVMYAKYGRVDSAL 321

Query: 252 KIFEQMIQKNVVSMN-----------------------------------------GLME 270
           ++F Q+ +K+ +S N                                         G + 
Sbjct: 322 RVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLS 381

Query: 271 GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
               G+E H Y I+  L   + VGN L++MY KCG+I+ S  VF  M  +D +SW T+++
Sbjct: 382 RLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILA 441

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
              Q+  + EA+     ++++G+M  +  + S L +C  L  I L +Q+H   ++ GL  
Sbjct: 442 CFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGL-L 500

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           D+ + N L+ +Y + G     L +F  + + D VSW S+I    ++  L + AV  + +M
Sbjct: 501 DLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRL-NGAVFLFTEM 559

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
           ++A   P+ V  ++IL A +  S    G QVH  +I+ N   E  + ++L+  Y  CG M
Sbjct: 560 QKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSM 619

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
           +   ++F R ++ +D V W +MI+    +    +A++L   M+Q G   DH +F  +L A
Sbjct: 620 NYAIRVFER-AKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYA 678

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIG-----------SALVDMYSKCGRIDYASRFF 619
           C+    +E G              D+++            + +VD+  + G+ + A  F 
Sbjct: 679 CSHSKLVEEGKHY----------LDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFI 728

Query: 620 DLMPV 624
             MP+
Sbjct: 729 KTMPM 733



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 148/571 (25%), Positives = 263/571 (46%), Gaps = 58/571 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD--EMPDRNSVSWACIVSGYTHKG 65
           H   +K G      + N LI +Y + G L SA ++F+  +   R+  SW  +VSG    G
Sbjct: 187 HGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNG 246

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
            + EA  +F+ M  AGF +N Y   +VL+ C E G      G ++H  +LK     + + 
Sbjct: 247 RTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGL--LSLGRELHAALLKCGSELN-IQ 303

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
            N L+ MY       D A R+F +I  +D ISWNS++S Y Q          F  M + G
Sbjct: 304 CNALLVMYAK-YGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHG 362

Query: 186 FRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           F    +P+     SL +A  + S L+     ++  A   K  L +DL VG+ L+  + + 
Sbjct: 363 F----QPDHACVVSLSSALGHLSRLNNG---REFHAYAIKQRLHTDLQVGNTLMDMYIKC 415

Query: 245 GNFYYARKIFEQMIQKNVVS-----------------MNGLMEGRRKG------------ 275
           G+   + K+FE M  ++ +S                 +  ++E +++G            
Sbjct: 416 GSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSIL 475

Query: 276 ------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                       K+VH Y IR+GL D++ + N L+++Y +CG  D S ++F+ +  KD V
Sbjct: 476 ETCCGLKSISLLKQVHCYAIRNGLLDLI-LENRLIDIYGECGEFDHSLNLFQRVEKKDIV 534

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SW +MI+    NG    A+  F  M++  +   + +L+S L + A L  +  G+Q+HG  
Sbjct: 535 SWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFL 594

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           ++     +  V ++L+ +Y+  G ++  ++VF      D V W ++I A         +A
Sbjct: 595 IRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINA-TGMHGHGKQA 653

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLS 502
           +  +  M + G +P+ V+F+ +L A S   + + G H +   V KY +         ++ 
Sbjct: 654 IDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVD 713

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
             G+ G+ ++  +    M        W +++
Sbjct: 714 ILGRSGQTEEAYEFIKTMPMDPKSAVWCALL 744



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 143/280 (51%), Gaps = 16/280 (5%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + + FH   +K     D+ + NTL+++Y++ G +  ++K+F+ M  R+ +SW  I++ + 
Sbjct: 385 NGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFA 444

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                +EA +M  E+ + G +++   +GS+L  C  CG        QVHC  ++ N   D
Sbjct: 445 QSSRHSEALEMILELQKEGIMVDSMMIGSILETC--CGLKSISLLKQVHCYAIR-NGLLD 501

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            ++ N LI +YG C E  D +  +F+ +E +D++SW S+I+  +  G       LF+ MQ
Sbjct: 502 LILENRLIDIYGECGE-FDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQ 560

Query: 183 REGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           +     +++P+     S++   A  SS+  G    +Q+   + +     +  V S+LV  
Sbjct: 561 KA----NIQPDSVALVSILVAIAGLSSLTKG----KQVHGFLIRRNFPIEGPVVSSLVDM 612

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHG 280
           ++  G+  YA ++FE+   K+VV    ++     G   HG
Sbjct: 613 YSGCGSMNYAIRVFERAKCKDVVLWTAMINA--TGMHGHG 650


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 274/709 (38%), Positives = 411/709 (57%), Gaps = 16/709 (2%)

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNV----------VSMNGLMEGRRKGKEVHGYLIRSG 286
           ++ G+A+  +   A   F +M   +V          + + G     ++GKE+HG +I SG
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
               +    G+VNMYAKC  I+D+ ++F  M  +D V WNTMISG  QNG  + A+M   
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
            M  +G    + +++S L + A    + +G  +HG  L+ G +S V+VS AL+ +Y+  G
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
            +S    +F  M     VSWNS+I  +  S      A+  +  M   G  P  VT +  L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQS-GDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
            A +     + G  VH  V +  + ++ ++ N+L+S Y KC  +D    IF  +   +  
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNL-RNKTL 298

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           VSWN+MI GY  N  + +A+N    M  R  + D FT  +V+ A A ++   +   +H  
Sbjct: 299 VSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGL 358

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            +R  L+ +V + +ALVDMY+KCG I  A + FD+M  R+V +WN+MI GY  HG G  +
Sbjct: 359 VIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTS 418

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           + LF +MK     P+ +TF+  LSACSH+GLV+EG   F+SM + YG+ P ++ +  MVD
Sbjct: 419 VELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVD 478

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           LLGRAG L++  +FI KMPI P   ++  +LGAC     +  +LG KAA  +F++ P + 
Sbjct: 479 LLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGAC--KIHKNVDLGEKAAFEIFKLNPDDG 536

Query: 767 VNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKD 826
             +VLLAN+YA+   W  VAK R  M+++ ++K  GCS V + + VH F +G  SHP+  
Sbjct: 537 GYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSK 596

Query: 827 LIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPI 885
            IY  L+ L  ++R AGYVP T  ++ D+E + K  L++ HSEK+A+AF +L  ++  PI
Sbjct: 597 KIYSYLETLVDEIRAAGYVPDTN-SIHDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPI 655

Query: 886 RIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            I KNLRVCGDCH+A K+IS + GREI++RD +RFH F DG CSCGDYW
Sbjct: 656 HIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704



 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 135/523 (25%), Positives = 241/523 (46%), Gaps = 60/523 (11%)

Query: 57  IVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLK 116
           ++ GY      + A   F  M         Y    +L+ C +   S  K G ++H  V+ 
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGD--NSDLKRGKEIHGSVIT 58

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
           S  +++      ++ MY  C +  D A  +F+ +  RDL+ WN++IS Y+Q G       
Sbjct: 59  SGFSWNLFAMTGVVNMYAKCRQIND-AYNMFDRMPERDLVCWNTMISGYAQNGFAKVALM 117

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAM---VKKAGLLSDLYV 233
           L  RM  EG R    P+  T  S++ A     ++ + LL+  +A+   V +AG  S + V
Sbjct: 118 LVLRMSEEGHR----PDSITIVSILPA-----VADTRLLRIGMAVHGYVLRAGFESLVNV 168

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR--------------------- 272
            +ALV  +++ G+   AR IF+ M  + VVS N +++G                      
Sbjct: 169 STALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGV 228

Query: 273 --------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
                                +GK VH  + +  L   V+V N L++MY+KC  +D +  
Sbjct: 229 QPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAAD 288

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           +F+ +  K  VSWN MI G  QNGC  EA+  FC M+   +   +F+++S + + A L  
Sbjct: 289 IFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSI 348

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
               + IHG  ++  LD +V V  AL+ +YA  G +    K+F +M     ++WN++I  
Sbjct: 349 PRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDG 408

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN 492
           +  +  L   +V+ + +M++    PN +TF+  L+A S   + + G     + +K +   
Sbjct: 409 YG-THGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEG-LCFFESMKKDYGI 466

Query: 493 ETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           E T+++  A++   G+ G ++       +M  +     + +M+
Sbjct: 467 EPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAML 509



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 217/477 (45%), Gaps = 58/477 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  ++  GF++++F    ++N+Y +   +  A  +FD MP+R+ V W  ++SGY
Sbjct: 47  KRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGY 106

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G +  A  +   M   G   +   + S+L A  +      + GM VH  VL++   F
Sbjct: 107 AQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADT--RLLRIGMAVHGYVLRAG--F 162

Query: 122 DGL--VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           + L  VS  L+ MY  C  S   AR IF+ ++ R ++SWNS+I  Y Q GD      +F 
Sbjct: 163 ESLVNVSTALVDMYSKC-GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQ 221

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           +M  EG + +   N    G+L   A    L     + +++  +K   L SD+ V ++L+S
Sbjct: 222 KMLDEGVQPT---NVTVMGALHACADLGDLERGKFVHKLVDQLK---LDSDVSVMNSLIS 275

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------------------------- 271
            +++      A  IF+ +  K +VS N ++ G                            
Sbjct: 276 MYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFT 335

Query: 272 -------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                         R+ K +HG +IR  L   V V   LV+MYAKCG I  +R +F  M 
Sbjct: 336 MVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMN 395

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            +  ++WN MI G   +G  + ++  F  M++  +  ++ + +  LS+C+  G +  G  
Sbjct: 396 ARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLC 455

Query: 379 IHGEGLK--LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
              E +K   G++  +    A++ L   AG L++       MP    ++ + +++GA
Sbjct: 456 FF-ESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGA 511


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 301/851 (35%), Positives = 476/851 (55%), Gaps = 44/851 (5%)

Query: 97  QECGPSG-FKFGMQVHC-LVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRD 154
           Q CG +G  + G  +H  LVL         ++N LI MY  C +    A R+F  +  R+
Sbjct: 28  QSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLAS-ALRLFAAMPRRN 86

Query: 155 LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL 214
            +SW +++S  SQ          F+ M+R G   +    E  F + +   ++  L+ S+ 
Sbjct: 87  AVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHT--LAASHC 144

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK--NVVSMNGLME-- 270
                 MVK                        Y+ ++++          V +  L++  
Sbjct: 145 HSGPTLMVK------------------------YWGQRLWRPPAPAAATTVHLASLLQSC 180

Query: 271 GR----RKGKEVHGYLIRSGLFDMVA-VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
           GR    R+G+ +H  L+ SG       + N L+ MY+ C  +  +  +F  M  +++VSW
Sbjct: 181 GRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSW 240

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
            T++SGL QN  + +A+  F AMRR G+  + F+L S   + A+LG  +  +        
Sbjct: 241 TTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASA-S 299

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
           +G D+++ V++ L  +Y+  G LS   +VF  MP+ D V+W ++I  +A + +L   AV 
Sbjct: 300 VGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSL-EAAVL 358

Query: 446 YYLDMRRAGW-SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
            + DM+R G    +   F ++L+A+     G L   +H  V K     E  + NAL+  Y
Sbjct: 359 SFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMY 418

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            K  +++   ++        + VS  SMI GYI  + + +A+ +   + ++G   + FTF
Sbjct: 419 AKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTF 478

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
           ++++  CA  A LE+G ++HA  ++  L  D  +GS LVDMY KCG I  + + F+ +  
Sbjct: 479 SSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEY 538

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           R   +WN++I+ +A+HGHG +A+  F +M   G  P+H+ FV +L+ACSHAGLVDEG K+
Sbjct: 539 RTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKY 598

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           F SM + +G+ P+ E +SC++D  GRAG LD+  +FI++MPI PN+  W ++LGA CR  
Sbjct: 599 FYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGA-CRMR 657

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
             K ELG  AA  L ++EP N   +V L+ +YAS G+WEDV   RK M+++ +KK  G S
Sbjct: 658 GSK-ELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFS 716

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLV 864
           WV      HVF + D SHP++  IYEKL+EL  ++++ GY+P T F   +LE  +KE ++
Sbjct: 717 WVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERIL 776

Query: 865 SYHSEKIAVAFVL-TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
            YHSE+IAVAF L +  +  PI + KNLR+C DCH+AFKFI K+  R+I++RD++RFHHF
Sbjct: 777 RYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHF 836

Query: 924 NDGKCSCGDYW 934
            +G+CSCGDYW
Sbjct: 837 VNGRCSCGDYW 847



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 153/626 (24%), Positives = 262/626 (41%), Gaps = 105/626 (16%)

Query: 2   KDAKLFHLQILKHGFAY-DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +  +L H +++  G A    FL N LI +Y    DLASA +LF  MP RN+VSW  +VSG
Sbjct: 37  RRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSG 96

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYA-------------------------------- 88
            +   M  +A   F  M RAG    R                                  
Sbjct: 97  LSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHCHSGPTLMVKYWG 156

Query: 89  ----------------LGSVLRACQECGPSGFKFGMQVHC-LVLKSNQTFDGLVSNVLIA 131
                           L S+L++C   G    + G  +H  LVL         ++N LI 
Sbjct: 157 QRLWRPPAPAAATTVHLASLLQSCGRAG--DLRRGRLLHARLVLSGAAAASTFLANHLIT 214

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY  C +    A R+F  +  R+ +SW +++S  SQ          F+ M+R G    + 
Sbjct: 215 MYSHCADLAS-ALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAG----VA 269

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           P  +   S   AA +             A V   G  ++L+V S L   +++ G    A 
Sbjct: 270 PTRFALSSAARAAAALGAPLRARSCTASASV---GFDTELFVASNLADMYSKCGLLSEAC 326

Query: 252 KIFEQMIQKNVVSMNGLMEG-----------------RRKG------------------- 275
           ++F+QM QK+ V+   +++G                 +R+G                   
Sbjct: 327 RVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGL 386

Query: 276 ------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK-DSVSWNTM 328
                 K +H  + ++G    VAV N L++MYAK   ++ +  V +   G  + VS  +M
Sbjct: 387 KDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSM 446

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           I G  +  C EEA++ +  +RR G+  + F+  S +  CA    +  G Q+H + +K  L
Sbjct: 447 IDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDL 506

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
             D  V + L+ +Y   G +S  +++F  +     ++WN+VI  FA       EA++ + 
Sbjct: 507 IRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQ-HGHGREAIQAFD 565

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKC 507
            M  +G  PN + F+++L A S   +   G +  ++    + +  +    + ++  YG+ 
Sbjct: 566 RMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRA 625

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMI 533
           G +D+  K  + M  + +   W S++
Sbjct: 626 GRLDEAYKFISEMPIKPNAYGWCSLL 651



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 147/321 (45%), Gaps = 15/321 (4%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR-NSVSWACIVSGYT 62
           +K  H  + K GF  +V + N LI++Y +  D+ SAS++    P   N VS   ++ GY 
Sbjct: 392 SKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYI 451

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                 EA  ++ E+ R G   N +   S+++ C     +  + G Q+H  V+K++   D
Sbjct: 452 ETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAM--QALLEQGAQLHAQVIKTDLIRD 509

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V + L+ MYG C      + ++F EIE R  I+WN++I+V++Q G      + F RM 
Sbjct: 510 SFVGSTLVDMYGKC-GLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMI 568

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             G R    PN   F SL+TA   + L     L+   +M +  G+       S ++  + 
Sbjct: 569 YSGIR----PNHIAFVSLLTACSHAGLVDEG-LKYFYSMKEAHGIEPKEEHYSCIIDTYG 623

Query: 243 RLGNFYYARKIFEQM-IQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG---- 296
           R G    A K   +M I+ N      L+   R +G +  G +    L  +     G    
Sbjct: 624 RAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVS 683

Query: 297 LVNMYAKCGTIDDSRSVFRFM 317
           L  +YA  G  +D ++V + M
Sbjct: 684 LSGIYASLGQWEDVKAVRKLM 704



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 169/370 (45%), Gaps = 58/370 (15%)

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS-VSNALLSLYADAGYLSRCLK 413
           ++   L S L SC   G +  G+ +H   +  G  +  + ++N L+++Y+    L+  L+
Sbjct: 18  ATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALR 77

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT----FINIL--- 466
           +F  MP  + VSW +++   + +  + ++A+  +  MRRAG +P  +     F N L   
Sbjct: 78  LFAAMPRRNAVSWTTLVSGLSQN-LMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPK 136

Query: 467 -----------------------------AAASSFSMGKL------------GHQVHAQV 485
                                        AAA++  +  L            G  +HA++
Sbjct: 137 HTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARL 196

Query: 486 IKYNVANETT-IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
           +    A  +T + N L++ Y  C ++    ++FA M  RR+ VSW +++SG   N +   
Sbjct: 197 VLSGAAAASTFLANHLITMYSHCADLASALRLFAAM-PRRNAVSWTTLVSGLSQNLMHAD 255

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD--VVIGSAL 602
           A+     M + G     F  ++   A A++      +   +C   A + FD  + + S L
Sbjct: 256 ALAAFAAMRRAGVAPTRFALSSAARAAAALGAP---LRARSCTASASVGFDTELFVASNL 312

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PD 661
            DMYSKCG +  A R FD MP ++  +W +MI GYA++G  + A+  F  MK +G +  D
Sbjct: 313 ADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGAD 372

Query: 662 HVTFVGVLSA 671
              F  VLSA
Sbjct: 373 QHVFCSVLSA 382


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 287/789 (36%), Positives = 442/789 (56%), Gaps = 78/789 (9%)

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY 213
           D+  WN  IS Y + G      ++F RM R                  + +Y++++SG Y
Sbjct: 58  DIKEWNVAISSYMRTGRCSEALRVFKRMPR----------------WSSVSYNAMISG-Y 100

Query: 214 LLQ---QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
           L     ++  M+       DL   + ++ G+ R  N   AR++FE+M +++V S N ++ 
Sbjct: 101 LRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILS 160

Query: 271 GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
           G                             YA+ G +DD+R VF  M  K+ VSWN ++S
Sbjct: 161 G-----------------------------YAQNGCVDDARRVFDRMPEKNDVSWNALLS 191

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
              QN   EEA + F +         N++L+S   +C   G++   + +         DS
Sbjct: 192 AYVQNSKLEEACVLFGS-------RENWALVSW--NCLLGGFVKKKKIVEARQF---FDS 239

Query: 391 ----DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
               DV   N +++ YA  G +    ++F   P HD  +W +++  +  +  +V EA + 
Sbjct: 240 MKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNR-MVEEAREL 298

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
           +  M       N V++  +LA        ++  ++   +   NV    +  N +++ Y +
Sbjct: 299 FDRMPER----NEVSWNAMLAGYVQGERVEMAKELFDVMPCRNV----STWNTMITGYAQ 350

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
           CG++ + + +F +M  +RD VSW +MI+GY  +    +A+ L   M + G RL+  +F++
Sbjct: 351 CGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSS 409

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
            LS CA V  LE G ++H   V+   E    +G+AL+ MY KCG I+ A+  F  M  ++
Sbjct: 410 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 469

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
           + SWN+MI+GY+RHG G++AL  F  MK +G  PD  T V VLSACSH GLVD+G ++F 
Sbjct: 470 IVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFH 529

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
           +M+Q YG+ P  + ++CMVDLLGRAG L++    +  MP  P++ IW T+LGA  R +  
Sbjct: 530 TMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGA-SRVHG- 587

Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
            TEL   AA+ +F MEP+N+  YVLL+N+YAS G+W DV K R  M++  VKK  G SW+
Sbjct: 588 NTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWI 647

Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSY 866
            +++  H F  GDE HPEKD I+  L++L+ +M+ AGYV +T   L D+E E KE +V Y
Sbjct: 648 EIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRY 707

Query: 867 HSEKIAVAFVLTR-NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFND 925
           HSE++AVA+ + R +S  PIR++KNLRVC DCH+A K+++K+ GR I+LRD+NRFHHF D
Sbjct: 708 HSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKD 767

Query: 926 GKCSCGDYW 934
           G CSCGDYW
Sbjct: 768 GSCSCGDYW 776



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 143/527 (27%), Positives = 241/527 (45%), Gaps = 78/527 (14%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM- 77
           D+   N +I  YVR  +L  A +LF+ MP+R+  SW  I+SGY   G  ++A ++F  M 
Sbjct: 120 DLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMP 179

Query: 78  ----VRAGFLLNRYALGSVL-RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAM 132
               V    LL+ Y   S L  AC         FG + +  ++  N    G V    I  
Sbjct: 180 EKNDVSWNALLSAYVQNSKLEEAC-------VLFGSRENWALVSWNCLLGGFVKKKKIVE 232

Query: 133 YGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKP 192
                     AR+ F+ ++ RD++SWN+II+ Y+Q G+     +LF              
Sbjct: 233 ----------ARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDE------------ 270

Query: 193 NEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK 252
                                              + D++  +A+VSG+ +      AR+
Sbjct: 271 ---------------------------------SPVHDVFTWTAMVSGYIQNRMVEEARE 297

Query: 253 IFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDM-----VAVGNGLVNMYAKCGTI 307
           +F++M ++N VS N ++ G  +G+ V    +   LFD+     V+  N ++  YA+CG I
Sbjct: 298 LFDRMPERNEVSWNAMLAGYVQGERVE---MAKELFDVMPCRNVSTWNTMITGYAQCGKI 354

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
            +++++F  M  +D VSW  MI+G  Q+G   EA+  F  M R+G   +  S  S LS+C
Sbjct: 355 SEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTC 414

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
           A +  + LG+Q+HG  +K G ++   V NALL +Y   G +     +F  M   D VSWN
Sbjct: 415 ADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWN 474

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVI 486
           ++I  ++       EA++++  M+R G  P+  T + +L+A S   +   G Q  H    
Sbjct: 475 TMIAGYS-RHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQ 533

Query: 487 KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            Y V   +     ++   G+ G +++   +   M    D   W +++
Sbjct: 534 DYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLL 580



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 143/304 (47%), Gaps = 20/304 (6%)

Query: 18  YDVFLC------NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           +DV  C      NT+I  Y + G ++ A  LFD+MP R+ VSWA +++GY+  G S EA 
Sbjct: 330 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEAL 389

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
           ++F  M R G  LNR +  S L  C +      + G Q+H  ++K        V N L+ 
Sbjct: 390 RLFVLMEREGGRLNRSSFSSALSTCADV--VALELGKQLHGRLVKGGYETGCFVGNALLL 447

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY  C  S + A  +F+E+  +D++SWN++I+ YS+ G      + F  M+REG    LK
Sbjct: 448 MYCKC-GSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREG----LK 502

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           P++ T  ++++A   + L      Q    M +  G+  +    + +V    R G    A 
Sbjct: 503 PDDATMVAVLSACSHTGLVDKG-RQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAH 561

Query: 252 KIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCG 305
            + + M  +   ++ G + G  R  G           +F M    +G    L N+YA  G
Sbjct: 562 NLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSG 621

Query: 306 TIDD 309
              D
Sbjct: 622 RWGD 625



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 177/412 (42%), Gaps = 80/412 (19%)

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI------ 430
           Q+   + L    DSD+   N  +S Y   G  S  L+VF  MP    VS+N++I      
Sbjct: 44  QKSQTKPLPKSGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRN 103

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
           G F  +  L  E  +  L      W+      + I     + ++GK   ++  ++ + +V
Sbjct: 104 GEFELARMLFDEMPERDL----VSWN------VMIKGYVRNRNLGK-ARELFERMPERDV 152

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
            +  TI    LS Y + G +DD  ++F RM E+ D VSWN+++S Y+ N  L +      
Sbjct: 153 CSWNTI----LSGYAQNGCVDDARRVFDRMPEKND-VSWNALLSAYVQNSKLEE------ 201

Query: 551 FMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCG 610
                              AC    + E               + +V  + L+  + K  
Sbjct: 202 -------------------ACVLFGSRE--------------NWALVSWNCLLGGFVKKK 228

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
           +I  A +FFD M VR+V SWN++I+GYA++G  D+A  LF +     P+ D  T+  ++S
Sbjct: 229 KIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDE----SPVHDVFTWTAMVS 284

Query: 671 ACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG--RAGELDKIEEFINKMPITP 728
                 +V+E  + F  M       P+  + S    L G  +   ++  +E  + MP   
Sbjct: 285 GYIQNRMVEEARELFDRM-------PERNEVSWNAMLAGYVQGERVEMAKELFDVMPCR- 336

Query: 729 NSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           N   W T++     A C K     +A N+  +M  ++ V++  +   Y+  G
Sbjct: 337 NVSTWNTMITGY--AQCGKIS---EAKNLFDKMPKRDPVSWAAMIAGYSQSG 383



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 153/343 (44%), Gaps = 59/343 (17%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           Q+      +DVF    +++ Y++   +  A +LFD MP+RN VSW  +++GY       E
Sbjct: 266 QLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQ----GE 321

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
             +M KE+                                   +  ++  T+     N +
Sbjct: 322 RVEMAKEL--------------------------------FDVMPCRNVSTW-----NTM 344

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           I  Y  C + ++ A+ +F+++  RD +SW ++I+ YSQ G +    +LF  M+REG R  
Sbjct: 345 ITGYAQCGKISE-AKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRL- 402

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
              N  +F S ++     V     L +Q+   + K G  +  +VG+AL+  + + G+   
Sbjct: 403 ---NRSSFSSALSTCADVV--ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 457

Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRK---GKEVHGY---LIRSGLFDMVAVGNGLVNMYAK 303
           A  +F++M  K++VS N ++ G  +   G+E   +   + R GL    A    +++  + 
Sbjct: 458 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSH 517

Query: 304 CGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA 341
            G +D  R  F  M     +  +S  +  M+  L + G  EEA
Sbjct: 518 TGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEA 560



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 52/97 (53%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H +++K G+    F+ N L+ +Y + G +  A+ LF EM  ++ VSW  +++GY+ 
Sbjct: 423 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR 482

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G   EA + F+ M R G   +   + +VL AC   G
Sbjct: 483 HGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTG 519


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 317/963 (32%), Positives = 491/963 (50%), Gaps = 76/963 (7%)

Query: 24   NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH-KGMSNEACKMFKEMVRAGF 82
            N +IN+Y + G    A  +F  +P+++ VSW  +   Y   +    +A ++F+EM+    
Sbjct: 170  NAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPL 229

Query: 83   LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC 142
              N     + L AC     +  + G  +H L+ ++   FD L  N LI MYG C +  + 
Sbjct: 230  APNVITFITALGAC-----TSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGD-WEG 283

Query: 143  ARRIFEEIETR---DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
            A  +F+ + +R   DL+SWN++IS   + G       +F R++ EG R    PN  T  +
Sbjct: 284  AYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMR----PNSVTLIT 339

Query: 200  LITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
            ++ A A S V  G+   ++    + ++G L D+ VG+A++S +A+ G F  A  +F ++ 
Sbjct: 340  ILNALAASGVDFGAA--RKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIR 397

Query: 259  QK-NVVSMNGLM---EGRRK--------------------------------------GK 276
             K +V+S N ++   E R+                                       G+
Sbjct: 398  WKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGR 457

Query: 277  EVHGY-LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI--GKDSVSWNTMISGLD 333
            ++H   L R   +   +V   LV+MY KCG+I ++  VF+ M    +  V+WN M+    
Sbjct: 458  KIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYA 517

Query: 334  QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC-ASLGWIMLGQQIHGEGLKLGLDSDV 392
            QN   +EA      M + G++    S  S LSSC  S    +L   I   G +       
Sbjct: 518  QNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYR-----SA 572

Query: 393  SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
             +  AL+S++     L +   VF  M   D VSW +++ A A++     E    +  M+ 
Sbjct: 573  CLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDF-KEVHHLFRRMQL 631

Query: 453  AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
             G  P+  T    L      +   LG  +HA V +  +  +  +ENALL+ Y  CG+  +
Sbjct: 632  EGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWRE 691

Query: 513  CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
                F  M + RD VSWN M + Y    L  +A+ L   M   G + D  TF+T L+   
Sbjct: 692  ALSFFETM-KARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSG 750

Query: 573  SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
              A +  G   H     + L+ DV + + LV +Y+KCG++D A   F       V   N+
Sbjct: 751  GSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNA 810

Query: 633  MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
            +I   A+HG  ++A+ +F +M+ +G  PD  T V ++SAC HAG+V+EG   F +M + +
Sbjct: 811  IIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYF 870

Query: 693  GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
            G+ P LE ++C VDLLGRAG+L+  E+ I KMP   N+L+W ++LG C        ELG 
Sbjct: 871  GISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQG--DAELGE 928

Query: 753  KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
            + A  + E++P N+  +V+L+N+Y + GKW+D    RK + +  VK   G SW+ +   V
Sbjct: 929  RCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQV 988

Query: 813  HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
            H FVAGD SHP+ D IY  L +L   MR AGY         D E E KE  + YHSE+IA
Sbjct: 989  HEFVAGDRSHPQTDEIYVVLDKLELLMRRAGYEADKG---LDAEDELKEKALGYHSERIA 1045

Query: 873  VAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
            +AF ++       ++I+KNLRVCGDCH+A K+IS I+GREI++RDS RFHHF++G CSC 
Sbjct: 1046 IAFGLIATPPDTTLKIVKNLRVCGDCHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCK 1105

Query: 932  DYW 934
            D W
Sbjct: 1106 DCW 1108



 Score =  298 bits (764), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 225/772 (29%), Positives = 362/772 (46%), Gaps = 84/772 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  I   G    +FL N LIN+YVR G L  A  +F +M +RN VSW  ++S     
Sbjct: 45  KRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQS 104

Query: 65  GMSNEACKMFKEM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLV----LKSNQ 119
           G    A  +F+ M + +    N Y L ++L AC          G  +H ++    L+   
Sbjct: 105 GAFARAFALFRTMLLESSAAPNSYTLVAMLNAC--ANSRDLAIGRSIHAMIWELGLERES 162

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR----GDTISVF 175
           T   LV N +I MY  C    D A  +F  I  +D++SW ++   Y+Q      D + +F
Sbjct: 163 TTATLVGNAMINMYAKCGSPED-AIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIF 221

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDLYV 233
                  RE     L PN  TF   ITA  A +S+  G++L     +++ +AGL  D   
Sbjct: 222 -------REMLLQPLAPNVITF---ITALGACTSLRDGTWL----HSLLHEAGLGFDPLA 267

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQK---NVVSMNGL---------------------M 269
           G+AL++ + + G++  A  +F+ M  +   ++VS N +                     +
Sbjct: 268 GNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRL 327

Query: 270 EGRRK---------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
           EG R                       ++ HG +  SG    V VGN +++MYAKCG   
Sbjct: 328 EGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFS 387

Query: 309 DSRSVFRFMIGK-DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
            + +VFR +  K D +SWNTM+   +    + + +  F  M   G+  +  S I+ L++C
Sbjct: 388 AAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNAC 447

Query: 368 ASLGWIMLGQQIHGEGLKLGLD-SDVSVSNALLSLYADAGYLSRCLKVF--FLMPEHDQV 424
           ++   +  G++IH   L    D  + SV+  L+S+Y   G ++    VF    +P    V
Sbjct: 448 SNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLV 507

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           +WN ++GA+A ++    EA    ++M + G  P+ ++F ++L++           QV   
Sbjct: 508 TWNVMLGAYAQNDR-SKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEA----QVLRM 562

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
            I  +      +E AL+S +G+C E++    +F  M +  D VSW +M+S    N    +
Sbjct: 563 CILESGYRSACLETALISMHGRCRELEQARSVFDEM-DHGDVVSWTAMVSATAENRDFKE 621

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
             +L   M   G   D FT AT L  C    TL  G  +HAC     LE D+ + +AL++
Sbjct: 622 VHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLN 681

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
           MYS CG    A  FF+ M  R++ SWN M + YA+ G   +A+ LF  M+L+G  PD +T
Sbjct: 682 MYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLT 741

Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
           F   L+    + LV +G K F  ++   GL   +   + +V L  + G+LD+
Sbjct: 742 FSTTLNVSGGSALVSDG-KLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDE 792



 Score =  236 bits (601), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 189/621 (30%), Positives = 305/621 (49%), Gaps = 71/621 (11%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G + H L+  +       + N LI MY  C  S + A  IF ++E R+++SW ++IS  +
Sbjct: 44  GKRAHELIANAGLEQHLFLGNCLINMYVRC-GSLEEAHAIFSKMEERNVVSWTALISANA 102

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
           Q G     F LF  M  E    S  PN YT  +++ A  +S      + + I AM+ + G
Sbjct: 103 QSGAFARAFALFRTMLLES---SAAPNSYTLVAMLNACANS--RDLAIGRSIHAMIWELG 157

Query: 227 L----LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL-----MEGR----- 272
           L     +   VG+A+++ +A+ G+   A  +F  + +K+VVS   +      E R     
Sbjct: 158 LERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDA 217

Query: 273 -----------------------------RKGKEVHGYLIRSGL-FDMVAVGNGLVNMYA 302
                                        R G  +H  L  +GL FD +A GN L+NMY 
Sbjct: 218 LRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEAGLGFDPLA-GNALINMYG 276

Query: 303 KCGTIDDSRSVFRFMIGK---DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
           KCG  + +  VF+ M  +   D VSWN MIS   + G + +A+  F  +R +G+  ++ +
Sbjct: 277 KCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVT 336

Query: 360 LISTLSSCASLGWIMLG--QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
           LI+ L++ A+ G +  G  ++ HG   + G   DV V NA++S+YA  G+ S    VF  
Sbjct: 337 LITILNALAASG-VDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRR 395

Query: 418 MP-EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
           +  + D +SWN+++GA  D ++   + V  +  M  AG  PN V+FI IL A S+     
Sbjct: 396 IRWKCDVISWNTMLGASEDRKSF-GKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALD 454

Query: 477 LGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMS-ERRDEVSWNSMIS 534
            G ++H+ ++ +     E+++   L+S YGKCG + + E +F  M    R  V+WN M+ 
Sbjct: 455 FGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLG 514

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA--CASVATLERGMEVHACGVR-AC 591
            Y  N+   +A   +  M+Q G   D  +F +VLS+  C+  A + R M +   G R AC
Sbjct: 515 AYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLR-MCILESGYRSAC 573

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
           LE      +AL+ M+ +C  ++ A   FD M   +V SW +M+S  A +    +   LF 
Sbjct: 574 LE------TALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFR 627

Query: 652 QMKLDGPLPDHVTFVGVLSAC 672
           +M+L+G +PD  T    L  C
Sbjct: 628 RMQLEGVIPDKFTLATTLDTC 648



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 143/489 (29%), Positives = 253/489 (51%), Gaps = 15/489 (3%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           KGK  H  +  +GL   + +GN L+NMY +CG+++++ ++F  M  ++ VSW  +IS   
Sbjct: 43  KGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANA 102

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
           Q+G +  A   F  M  +   + N ++L++ L++CA+   + +G+ IH    +LGL+ + 
Sbjct: 103 QSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERES 162

Query: 393 S----VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           +    V NA++++YA  G     + VF  +PE D VSW ++ GA+A       +A++ + 
Sbjct: 163 TTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFR 222

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
           +M     +PN +TFI  L A +S    + G  +H+ + +  +  +    NAL++ YGKCG
Sbjct: 223 EMLLQPLAPNVITFITALGACTSL---RDGTWLHSLLHEAGLGFDPLAGNALINMYGKCG 279

Query: 509 EMDDCEKIFARMSERR--DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
           + +    +F  M+ R+  D VSWN+MIS  +       AM +   +   G R +  T  T
Sbjct: 280 DWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLIT 339

Query: 567 VLSA-CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           +L+A  AS        + H     +    DVV+G+A++ MY+KCG    A   F  +  +
Sbjct: 340 ILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWK 399

Query: 626 -NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK- 683
            +V SWN+M+          K +  F  M L G  P+ V+F+ +L+ACS++  +D G K 
Sbjct: 400 CDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKI 459

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI-WRTVLGACCR 742
           H   +++    + +    + +V + G+ G + + E    +MP+   SL+ W  +LGA  +
Sbjct: 460 HSLILTRRRDYV-ESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQ 518

Query: 743 ANCRKTELG 751
            +  K   G
Sbjct: 519 NDRSKEAFG 527



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 177/688 (25%), Positives = 310/688 (45%), Gaps = 74/688 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNS---VSWACIV 58
           +D    H  + + G  +D    N LIN+Y + GD   A  +F  M  R     VSW  ++
Sbjct: 247 RDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMI 306

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGM--QVHCLVLK 116
           S     G   +A  +F+ +   G   N   L ++L A      SG  FG   + H  + +
Sbjct: 307 SASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNA---LAASGVDFGAARKFHGRIWE 363

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR-DLISWNSIISVYSQRGDTISVF 175
           S    D +V N +I+MY  C      A  +F  I  + D+ISWN+++     R     V 
Sbjct: 364 SGYLRDVVVGNAIISMYAKC-GFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVV 422

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVG 234
             F  M   G    + PN+ +F +++ A + S  L     +  ++   ++  + S   V 
Sbjct: 423 NTFHHMLLAG----IDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESS--VA 476

Query: 235 SALVSGFARLGNFYYARKIFEQM--IQKNVVSMN---GLMEGRRKGKEVHGYLI------ 283
           + LVS + + G+   A  +F++M    +++V+ N   G      + KE  G L+      
Sbjct: 477 TMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGG 536

Query: 284 -------------------RSGLFDMVAVGNG---------LVNMYAKCGTIDDSRSVFR 315
                               + +  M  + +G         L++M+ +C  ++ +RSVF 
Sbjct: 537 VLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFD 596

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M   D VSW  M+S   +N  ++E    F  M+ +G++   F+L +TL +C     + L
Sbjct: 597 EMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGL 656

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G+ IH    ++GL++D++V NALL++Y++ G     L  F  M   D VSWN +  A+A 
Sbjct: 657 GKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQ 716

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTF---INILAAASSFSMGKLGHQVHAQVIKYNVAN 492
           +  L  EAV  +  M+  G  P+ +TF   +N+   ++  S GKL H + A+     + +
Sbjct: 717 A-GLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAE---SGLDS 772

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
           + ++   L+  Y KCG++D+   +F R + +   V  N++I     +    +A+ + W M
Sbjct: 773 DVSVATGLVKLYAKCGKLDEAISLF-RGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKM 831

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHAC-----GVRACLEFDVVIGSALVDMYS 607
            Q G R D  T  +++SAC     +E G           G+   LE      +  VD+  
Sbjct: 832 QQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHY----ACFVDLLG 887

Query: 608 KCGRIDYASRFFDLMPVR-NVYSWNSMI 634
           + G++++A +    MP   N   W S++
Sbjct: 888 RAGQLEHAEQIIRKMPFEDNTLVWTSLL 915



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 182/385 (47%), Gaps = 14/385 (3%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L SC     +  G++ H      GL+  + + N L+++Y   G L     +F  M E + 
Sbjct: 32  LQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNV 91

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSW ++I A A S A       +   +  +  +PN  T + +L A ++     +G  +HA
Sbjct: 92  VSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHA 151

Query: 484 QVIKYNVANETT----IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
            + +  +  E+T    + NA+++ Y KCG  +D   +F  + E +D VSW +M   Y   
Sbjct: 152 MIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPE-KDVVSWTAMAGAYAQE 210

Query: 540 -ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
               P A+ +   M+ +    +  TF T L AC S   L  G  +H+    A L FD + 
Sbjct: 211 RRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDGTWLHSLLHEAGLGFDPLA 267

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVR---NVYSWNSMISGYARHG-HGDKALTLFSQMK 654
           G+AL++MY KCG  + A   F  M  R   ++ SWN+MIS     G HGD A+ +F +++
Sbjct: 268 GNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGD-AMAIFRRLR 326

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
           L+G  P+ VT + +L+A + +G+     + F       G +  +   + ++ +  + G  
Sbjct: 327 LEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFF 386

Query: 715 DKIEEFINKMPITPNSLIWRTVLGA 739
                   ++    + + W T+LGA
Sbjct: 387 SAAWTVFRRIRWKCDVISWNTMLGA 411



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 185/432 (42%), Gaps = 48/432 (11%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S++A++  + IL+ G+     L   LI+++ R  +L  A  +FDEM   + VSW  +VS 
Sbjct: 554 SQEAQVLRMCILESGY-RSACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSA 612

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
                   E   +F+ M   G + +++ L + L  C +    G   G  +H  V +    
Sbjct: 613 TAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLG--LGKIIHACVTEIGLE 670

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D  V N L+ MY +C +  + A   FE ++ RDL+SWN + + Y+Q G       LF  
Sbjct: 671 ADIAVENALLNMYSNCGDWRE-ALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRH 729

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           MQ EG    +KP++ TF + +  +  S L     L   LA   ++GL SD+ V + LV  
Sbjct: 730 MQLEG----VKPDKLTFSTTLNVSGGSALVSDGKLFHGLA--AESGLDSDVSVATGLVKL 783

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
           +A+ G    A  +F    Q  VV +N ++          G L + G  +        V M
Sbjct: 784 YAKCGKLDEAISLFRGACQWTVVLLNAII----------GALAQHGFSEEA------VKM 827

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           + K         + +  +  D  +  ++IS     G  EE   +F  M+        F +
Sbjct: 828 FWK---------MQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKE------YFGI 872

Query: 361 ISTLSSCASLGWIM--LGQQIHGEGL--KLGLDSDVSVSNALL---SLYADAGYLSRCLK 413
             TL   A    ++   GQ  H E +  K+  + +  V  +LL    L  DA    RC +
Sbjct: 873 SPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQ 932

Query: 414 VFFLMPEHDQVS 425
               +  H+  +
Sbjct: 933 RILELDPHNSAA 944



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 113/281 (40%), Gaps = 49/281 (17%)

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRI 612
           + R   L  +T   +L +C     L +G   H     A LE  + +G+ L++MY +CG +
Sbjct: 19  VDRAADLQEYT--ALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSL 76

Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD-GPLPDHVTFVGVLSA 671
           + A   F  M  RNV SW ++IS  A+ G   +A  LF  M L+    P+  T V +L+A
Sbjct: 77  EEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNA 136

Query: 672 CS-----------HAGLVDEGFKHFKSMSQVYG---------------------LIPQLE 699
           C+           HA + + G +   + + + G                      IP+ +
Sbjct: 137 CANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKD 196

Query: 700 QFSCMVDLLGRAGE----LDKIEEFINKM--PITPNSLIWRTVLGACC--RANCRKTELG 751
             S        A E     D +  F   +  P+ PN + + T LGAC   R       L 
Sbjct: 197 VVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLL 256

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAM 792
            +A  + F+    NA     L NMY   G WE      KAM
Sbjct: 257 HEAG-LGFDPLAGNA-----LINMYGKCGDWEGAYGVFKAM 291


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 263/665 (39%), Positives = 402/665 (60%), Gaps = 7/665 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           RKGK +H  +  S     V V   LVN Y KCG++ D+R VF  M  +   +WN+MIS  
Sbjct: 27  RKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAY 86

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
             +    EA   F  M+ +G      + +S L +C +   +  G+ +     +   + D+
Sbjct: 87  SISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDL 146

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V  AL+++YA         +VF  M + + ++W+++I AFAD      EA++Y+  M++
Sbjct: 147 FVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFAD-HGHCGEALRYFRMMQQ 205

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC--GEM 510
            G  PN VTFI++L   ++ S  +   ++H  + ++ + + TT+ NAL++ YG+C  GE+
Sbjct: 206 EGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGEL 265

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
           D  E I   M E++   +WN +I+GY  +    +A+     +      +D  TF +VL+A
Sbjct: 266 DVAEVILQEMDEQQI-TAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNA 324

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
           C S  +L  G  +H+  V   L+ DV++ +AL +MYSKCG ++ A R FD MP+R+  SW
Sbjct: 325 CTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSW 384

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           N M+  YA+HG  ++ L L  +M+ +G   + +TFV VLS+CSHAGL+ EG ++F S+  
Sbjct: 385 NGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGH 444

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
             G+  + E + C+VDLLGRAG+L + E++I+KMP  P  + W ++LGA CR + +  + 
Sbjct: 445 DRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGA-CRVH-KDLDR 502

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
           G+ AA  L E++P N+   V+L+N+Y+  G W++ AK R+AM    VKK  G S + +K+
Sbjct: 503 GKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKN 562

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
            VH F   D SHP    IY+K++EL   MR+AGYVP TK  L D++ E KE L++YHSEK
Sbjct: 563 KVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEK 622

Query: 871 IAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +A+AF +++   K  + I KNLRVC DCH+A KFISKI GREIV+RD++RFHHF DG CS
Sbjct: 623 LAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCS 682

Query: 930 CGDYW 934
           C DYW
Sbjct: 683 CKDYW 687



 Score =  188 bits (477), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 217/476 (45%), Gaps = 54/476 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  + +   + DVF+   L+N Y + G L  A K+FD MP R+  +W  ++S Y
Sbjct: 27  RKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAY 86

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +    S EA  +F+ M   G   +R    S+L AC    P   + G  V   + +++   
Sbjct: 87  SISERSGEAFFIFQRMQHEGERCDRVTFLSILDAC--VNPENLQHGKHVRESISETSFEL 144

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V   LI MY  C  S + A ++F  ++ ++LI+W++II+ ++  G      + F  M
Sbjct: 145 DLFVGTALITMYARC-RSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMM 203

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           Q+EG    + PN  TF SL+    +   SG   L +I  ++ + GL     + +ALV+ +
Sbjct: 204 QQEG----ILPNRVTFISLLNGFTTP--SGLEELSRIHLLITEHGLDDTTTMSNALVNVY 257

Query: 242 AR--LGNFYYARKIFEQMIQKNVVSMNGLMEGRR-------------------------- 273
            R   G    A  I ++M ++ + + N L+ G                            
Sbjct: 258 GRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVT 317

Query: 274 ---------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                          +GK +H   +  GL   V V N L NMY+KCG+++++R +F  M 
Sbjct: 318 FISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMP 377

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-Q 377
            + +VSWN M+    Q+G  EE +     M ++G+  +  + +S LSSC+  G I  G Q
Sbjct: 378 IRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQ 437

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
             H  G   G++        L+ L   AG L    K    MP E + V+W S++GA
Sbjct: 438 YFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGA 493



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 218/461 (47%), Gaps = 47/461 (10%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM-------------------- 269
           D++V +ALV+ + + G+   ARK+F+ M  ++V + N ++                    
Sbjct: 44  DVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQ 103

Query: 270 -EGRRKGKEV---------------HGYLIRSGL----FDM-VAVGNGLVNMYAKCGTID 308
            EG R  +                 HG  +R  +    F++ + VG  L+ MYA+C + +
Sbjct: 104 HEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPE 163

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
           ++  VF  M  K+ ++W+ +I+    +G   EA+  F  M+++G++ +  + IS L+   
Sbjct: 164 NAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFT 223

Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA--DAGYLSRCLKVFFLMPEHDQVSW 426
           +   +    +IH    + GLD   ++SNAL+++Y   + G L     +   M E    +W
Sbjct: 224 TPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAW 283

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
           N +I  +        EA++ Y  ++      + VTFI++L A +S +    G  +H+  +
Sbjct: 284 NVLINGYT-LHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAV 342

Query: 487 KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAM 546
           +  + ++  ++NAL + Y KCG M++  +IF  M   R  VSWN M+  Y  +    + +
Sbjct: 343 ECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMP-IRSAVSWNGMLQAYAQHGESEEVL 401

Query: 547 NLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALVDM 605
            L+  M Q G +L+  TF +VLS+C+    +  G +  H+ G    +E        LVD+
Sbjct: 402 KLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDL 461

Query: 606 YSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDK 645
             + G++  A ++   MP    + +W S++     H   D+
Sbjct: 462 LGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDR 502



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 142/274 (51%), Gaps = 6/274 (2%)

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G   N +TF+N+L +       + G  +H+ V +   + +  +  AL++ Y KCG + D 
Sbjct: 5   GVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDA 64

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            K+F  M   R   +WNSMIS Y  +E   +A  +   M   G+R D  TF ++L AC +
Sbjct: 65  RKVFDGMP-CRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVN 123

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
              L+ G  V         E D+ +G+AL+ MY++C   + A++ F  M  +N+ +W+++
Sbjct: 124 PENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAI 183

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA-CSHAGLVDEGFKHFKSMSQVY 692
           I+ +A HGH  +AL  F  M+ +G LP+ VTF+ +L+   + +GL  E       +   +
Sbjct: 184 ITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGL--EELSRIHLLITEH 241

Query: 693 GLIPQLEQFSCMVDLLGR--AGELDKIEEFINKM 724
           GL       + +V++ GR   GELD  E  + +M
Sbjct: 242 GLDDTTTMSNALVNVYGRCETGELDVAEVILQEM 275



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 137/323 (42%), Gaps = 11/323 (3%)

Query: 552 MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR 611
           M+  G + +  TF  VL++      L +G  +H+C   +    DV + +ALV+ Y+KCG 
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
           +  A + FD MP R+V +WNSMIS Y+      +A  +F +M+ +G   D VTF+ +L A
Sbjct: 61  LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120

Query: 672 CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
           C +   +  G KH +           L   + ++ +  R    +   +   +M    N +
Sbjct: 121 CVNPENLQHG-KHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMK-QKNLI 178

Query: 732 IWRTVLGACC-RANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARK 790
            W  ++ A     +C   E  R    M  E    N V ++ L N + +    E++++   
Sbjct: 179 TWSAIITAFADHGHC--GEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHL 236

Query: 791 AMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKF 850
            +       E G    T      V V G     E D+    L+E++++   A  V    +
Sbjct: 237 LI------TEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGY 290

Query: 851 ALFDLEPESKEDLVSYHSEKIAV 873
            L     E+ E       E I V
Sbjct: 291 TLHGRSREALETYQRLQLEAIPV 313


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 292/784 (37%), Positives = 449/784 (57%), Gaps = 47/784 (5%)

Query: 159 NSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQI 218
           N+++ +Y + G+T    KLF RM         K N  ++ SLI+  Y+ +  G Y   ++
Sbjct: 58  NNLLYMYCKCGETDVAKKLFDRMP--------KRNVVSWNSLISG-YTQM--GFY--HEV 104

Query: 219 LAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEV 278
           + + K+A + SDL           RL  F ++          N +S+ G     R G+ +
Sbjct: 105 MNLFKEARM-SDL-----------RLDKFTFS----------NALSVCGRTLDLRLGRLI 142

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H  +  SGL   V + N L++MY KCG ID +R VF      DSVSWN++I+G  + G  
Sbjct: 143 HALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSN 202

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCAS--LGWIMLGQQIHGEGLKLGLDSDVSVSN 396
           +E +     M R GL  ++++L S L +C S     I  G+ +HG  +KLGLD DV V  
Sbjct: 203 DEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGT 262

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV----SEAVKYYLDMRR 452
           ALL  YA  G L    K+F LMP+ + V +N++I  F   E +     +EA+  + +M+ 
Sbjct: 263 ALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQS 322

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G  P+  TF +IL A S+    + G Q+HAQ+ KYN+ ++  I NAL+  Y   G ++D
Sbjct: 323 RGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIED 382

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
             K F   + + D VSW S+I G++ N      + L   ++  G++ D FT + +LSACA
Sbjct: 383 GLKCF-HSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACA 441

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
           ++A ++ G ++HA  ++  +    +I ++ + MY+KCG ID A+  F      ++ SW+ 
Sbjct: 442 NLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSV 501

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           MIS  A+HG   +A+ LF  MK  G  P+H+TF+GVL ACSH GLV+EG ++F+ M + +
Sbjct: 502 MISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDH 561

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
           G+ P ++  +C+VDLLGRAG L + E FI       + ++WR++L A CR + + T+ G+
Sbjct: 562 GITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSA-CRVH-KATDTGK 619

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
           + A  + E+EP+ A +YVLL N+Y   G      + R  MK+  VKKE G SW+ + + V
Sbjct: 620 RVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVV 679

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKED-LVSYHSEKI 871
           H FVAGD SHP   +IY +L+E+ ++++   Y+ + K      EP+ K++ +VSYHSEK+
Sbjct: 680 HSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDE-KLVSDASEPKHKDNSMVSYHSEKL 738

Query: 872 AVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           AV F +++     P+R+MKNLR C  CH   K  S++  REI+LRD  RFH F DG CSC
Sbjct: 739 AVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSC 798

Query: 931 GDYW 934
           GDYW
Sbjct: 799 GDYW 802



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 161/580 (27%), Positives = 264/580 (45%), Gaps = 57/580 (9%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            KL H+ ++K  F   +FL N L+ +Y + G+   A KLFD MP RN VSW  ++SGYT 
Sbjct: 38  GKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQ 97

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G  +E   +FKE   +   L+++   + L  C        + G  +H L+  S      
Sbjct: 98  MGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT--LDLRLGRLIHALITVSGLGGPV 155

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           L++N LI MY  C    D AR +FE  +  D +SWNS+I+ Y + G    + +L  +M R
Sbjct: 156 LLTNSLIDMYCKC-GRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLR 214

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G    L  N Y  GS + A  S+  S     + +     K GL  D+ VG+AL+  +A+
Sbjct: 215 HG----LNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAK 270

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------------------------- 274
           +G+   A KIF+ M   NVV  N ++ G  +                             
Sbjct: 271 IGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEF 330

Query: 275 -----------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                            GK++H  + +  L     +GN LV +Y+  G+I+D    F   
Sbjct: 331 TFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHST 390

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
              D VSW ++I G  QNG +E  +  F  +   G     F++   LS+CA+L  +  G+
Sbjct: 391 PKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGE 450

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           QIH   +K G+ +   + N+ + +YA  G +      F      D VSW+ +I + A   
Sbjct: 451 QIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNA-QH 509

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
               EAV  +  M+ +G +PN +TF+ +L A S   + + G + + +++K +      ++
Sbjct: 510 GCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLR-YFEIMKKDHGITPNVK 568

Query: 498 NA--LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           ++  ++   G+ G + + E          D V W S++S 
Sbjct: 569 HSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSA 608



 Score =  206 bits (523), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 237/484 (48%), Gaps = 19/484 (3%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK  H ++I++     + + N L+ MY KCG  D ++ +F  M  ++ VSWN++ISG  Q
Sbjct: 38  GKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQ 97

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G Y E +  F   R   L    F+  + LS C     + LG+ IH      GL   V +
Sbjct: 98  MGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLL 157

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           +N+L+ +Y   G +     VF    E D VSWNS+I  +    +   E ++  + M R G
Sbjct: 158 TNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGS-NDEMLRLLVKMLRHG 216

Query: 455 WSPNGVTFINIL-AAASSFSMG-KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            + N     + L A  S+FS   + G  +H   +K  +  +  +  ALL  Y K G+++D
Sbjct: 217 LNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLED 276

Query: 513 CEKIFARMSERRDEVSWNSMISGYIH-----NELLPKAMNLVWFMMQRGQRLDHFTFATV 567
             KIF  M +  + V +N+MI+G++      +E   +AM L + M  RG +   FTF+++
Sbjct: 277 ATKIFKLMPD-PNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSI 335

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           L AC+++   E G ++HA   +  L+ D  IG+ALV++YS  G I+   + F   P  +V
Sbjct: 336 LKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDV 395

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            SW S+I G+ ++G  +  LTLF ++   G  PD  T   +LSAC++   V  G      
Sbjct: 396 VSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSG-----E 450

Query: 688 MSQVYGLIPQLEQFSCMVD----LLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
               Y +   +  F+ + +    +  + G++D       K    P+ + W  ++ +  + 
Sbjct: 451 QIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDS-ANMTFKETKNPDIVSWSVMISSNAQH 509

Query: 744 NCRK 747
            C K
Sbjct: 510 GCAK 513



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 184/365 (50%), Gaps = 17/365 (4%)

Query: 362 STLSSCAS-LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           + L  C++  G ++ G+  H   +K      + + N LL +Y   G      K+F  MP+
Sbjct: 23  TKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRMPK 82

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            + VSWNS+I  +        E +  + + R +    +  TF N L+        +LG  
Sbjct: 83  RNVVSWNSLISGYTQM-GFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRL 141

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +HA +    +     + N+L+  Y KCG +D    +F    E  D VSWNS+I+GY+   
Sbjct: 142 IHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADE-LDSVSWNSLIAGYVRIG 200

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS--VATLERGMEVHACGVRACLEFDVVI 598
              + + L+  M++ G  L+ +   + L AC S   +++E G  +H C V+  L+ DVV+
Sbjct: 201 SNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVV 260

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR-----HGHGDKALTLFSQM 653
           G+AL+D Y+K G ++ A++ F LMP  NV  +N+MI+G+ +         ++A+ LF +M
Sbjct: 261 GTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEM 320

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM-SQVYGLIPQLEQF--SCMVDLLGR 710
           +  G  P   TF  +L ACS      E F+  K + +Q++    Q ++F  + +V+L   
Sbjct: 321 QSRGMKPSEFTFSSILKACS----TIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSL 376

Query: 711 AGELD 715
           +G ++
Sbjct: 377 SGSIE 381



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 147/320 (45%), Gaps = 8/320 (2%)

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
           YYL     G   + VT+  ++  ++       G   H  +IK        + N LL  Y 
Sbjct: 11  YYL-----GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYC 65

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           KCGE D  +K+F RM  +R+ VSWNS+ISGY       + MNL         RLD FTF+
Sbjct: 66  KCGETDVAKKLFDRMP-KRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFS 124

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
             LS C     L  G  +HA    + L   V++ ++L+DMY KCGRID+A   F+     
Sbjct: 125 NALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADEL 184

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC-SHAGLVDEGFKH 684
           +  SWNS+I+GY R G  D+ L L  +M   G   +       L AC S+     E  K 
Sbjct: 185 DSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKM 244

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
               +   GL   +   + ++D   + G+L+   +    MP  PN +++  ++    +  
Sbjct: 245 LHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMP-DPNVVMYNAMIAGFLQME 303

Query: 745 CRKTELGRKAANMLFEMEPQ 764
               E   +A  + FEM+ +
Sbjct: 304 TMADEFANEAMYLFFEMQSR 323



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 46/99 (46%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H   +K G      + N+ I +Y + GD+ SA+  F E  + + VSW+ ++S  
Sbjct: 447 KSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSN 506

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G + EA  +F+ M  +G   N      VL AC   G
Sbjct: 507 AQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGG 545


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 293/863 (33%), Positives = 466/863 (53%), Gaps = 72/863 (8%)

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE--STDCARRIFE 148
           + LR  ++  P+ F    +V   ++K+    D   SN ++      L       AR++++
Sbjct: 16  ATLRQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVE---DLLRRGQVSAARKVYD 72

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
           E+  ++ +S N++IS + + GD  S   LF  M          P+        T    ++
Sbjct: 73  EMPHKNTVSTNTMISGHVKTGDVSSARDLFDAM----------PDR-------TVVTWTI 115

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ------KNV 262
           L G Y                            AR  +F  A K+F QM +       + 
Sbjct: 116 LMGWY----------------------------ARNSHFDEAFKLFRQMCRSSSCTLPDH 147

Query: 263 VSMNGLMEG------RRKGKEVHGYLIRSGLFD---MVAVGNGLVNMYAKCGTIDDSRSV 313
           V+   L+ G      +    +VH + ++ G FD    + V N L+  Y +   +D +  +
Sbjct: 148 VTFTTLLPGCNDAVPQNAVGQVHAFAVKLG-FDTNPFLTVSNVLLKSYCEVRRLDLACVL 206

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           F  +  KDSV++NT+I+G +++G Y E+I  F  MR+ G   S+F+    L +   L   
Sbjct: 207 FEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDF 266

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
            LGQQ+H   +  G   D SV N +L  Y+    +     +F  MPE D VS+N VI ++
Sbjct: 267 ALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSY 326

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE 493
           + ++     ++ ++ +M+  G+      F  +L+ A++ S  ++G Q+H Q +     + 
Sbjct: 327 SQADQY-EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM 553
             + N+L+  Y KC   ++ E IF  + +R   VSW ++ISGY+   L    + L   M 
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQR-TTVSWTALISGYVQKGLHGAGLKLFTKMR 444

Query: 554 QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID 613
               R D  TFATVL A AS A+L  G ++HA  +R+    +V  GS LVDMY+KCG I 
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
            A + F+ MP RN  SWN++IS +A +G G+ A+  F++M   G  PD V+ +GVL+ACS
Sbjct: 505 DAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564

Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
           H G V++G ++F++MS +YG+ P+ + ++CM+DLLGR G   + E+ +++MP  P+ ++W
Sbjct: 565 HCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMW 624

Query: 734 RTVLGACCRANCRKTELGRKAANMLFEMEP-QNAVNYVLLANMYASGGKWEDVAKARKAM 792
            +VL A CR + +   L  +AA  LF ME  ++A  YV ++N+YA+ G+WE V   +KAM
Sbjct: 625 SSVLNA-CRIH-KNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAM 682

Query: 793 KEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFAL 852
           +E  +KK    SWV +   +HVF + D++HP  D I  K+ EL  ++   GY P T   +
Sbjct: 683 RERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVV 742

Query: 853 FDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGRE 911
            D++ + K + + YHSE++AVAF L    +  PI +MKNLR C DCH+A K ISKIV RE
Sbjct: 743 QDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKRE 802

Query: 912 IVLRDSNRFHHFNDGKCSCGDYW 934
           I +RD++RFHHF++G CSCGDYW
Sbjct: 803 ITVRDTSRFHHFSEGVCSCGDYW 825



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 156/585 (26%), Positives = 275/585 (47%), Gaps = 68/585 (11%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAG-- 81
           NT+I+ +V+ GD++SA  LFD MPDR  V+W  ++  Y      +EA K+F++M R+   
Sbjct: 83  NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142

Query: 82  FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG----LVSNVLIAMYGSCL 137
            L +     ++L  C +  P     G QVH   +K    FD      VSNVL+  Y   +
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQN-AVG-QVHAFAVKLG--FDTNPFLTVSNVLLKSYCE-V 197

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
              D A  +FEEI  +D +++N++I+ Y + G       LF +M++ G     +P+++TF
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGH----QPSDFTF 253

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
             ++ A     L    L QQ+ A+    G   D  VG+ ++  +++       R +F++M
Sbjct: 254 SGVLKAVVG--LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEM 311

Query: 258 IQKNVVSMNGLMEG-----------------------RRK------------------GK 276
            + + VS N ++                         RR                   G+
Sbjct: 312 PELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGR 371

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           ++H   + +    ++ VGN LV+MYAKC   +++  +F+ +  + +VSW  +ISG  Q G
Sbjct: 372 QLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKG 431

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
            +   +  F  MR   L +   +  + L + AS   ++LG+Q+H   ++ G   +V   +
Sbjct: 432 LHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGS 491

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS---EALVSEAVKYYLDMRRA 453
            L+ +YA  G +   ++VF  MP+ + VSWN++I A AD+   EA    A+  +  M  +
Sbjct: 492 GLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEA----AIGAFAKMIES 547

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           G  P+ V+ + +L A S     + G +   A    Y +  +      +L   G+ G   +
Sbjct: 548 GLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAE 607

Query: 513 CEKIFARMSERRDEVSWNSMISG-YIH-NELLPKAMNLVWFMMQR 555
            EK+   M    DE+ W+S+++   IH N+ L +      F M++
Sbjct: 608 AEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEK 652



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 118/489 (24%), Positives = 222/489 (45%), Gaps = 48/489 (9%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +  GF+ D  + N +++ Y +   +     LFDEMP+ + VS+  ++S Y+    
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
              +   F+EM   GF    +   ++L        S  + G Q+HC  L +       V 
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIAANL--SSLQMGRQLHCQALLATADSILHVG 389

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+ MY  C E  + A  IF+ +  R  +SW ++IS Y Q+G   +  KLF++M+    
Sbjct: 390 NSLVDMYAKC-EMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGS-- 446

Query: 187 RYSLKPNEYTFGSLI--TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
             +L+ ++ TF +++  +A+++S+L G    +Q+ A + ++G L +++ GS LV  +A+ 
Sbjct: 447 --NLRADQSTFATVLKASASFASLLLG----KQLHAFIIRSGNLENVFSGSGLVDMYAKC 500

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE------VHGYLIRSGL-FDMVAVGNGL 297
           G+   A ++FE+M  +N VS N L+       +          +I SGL  D V++  G+
Sbjct: 501 GSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSIL-GV 559

Query: 298 VNMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA--IMNFCAMRR 350
           +   + CG ++     F+ M     I      +  M+  L +NG + EA  +M+      
Sbjct: 560 LTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEP 619

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
           D +M S     S L++C       L ++   +   +    D +   ++ ++YA AG   +
Sbjct: 620 DEIMWS-----SVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEK 674

Query: 411 CLKVFFLM--------PEHDQVSWNSVIGAFA-------DSEALVSEAVKYYLDMRRAGW 455
              V   M        P +  V  N  I  F+       + + +V +  +   ++ R G+
Sbjct: 675 VRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGY 734

Query: 456 SPNGVTFIN 464
            P+  + + 
Sbjct: 735 KPDTSSVVQ 743



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 54/96 (56%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  I++ G   +VF  + L+++Y + G +  A ++F+EMPDRN+VSW  ++S +   
Sbjct: 472 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADN 531

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G    A   F +M+ +G   +  ++  VL AC  CG
Sbjct: 532 GDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 249/676 (36%), Positives = 402/676 (59%), Gaps = 6/676 (0%)

Query: 260 KNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
           K ++     ++ + + K++H   IR+      +  + ++++Y     + ++  VF+ +  
Sbjct: 9   KTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLVFKTLES 67

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
              ++W ++I        +  A+ +F  MR  G    +    S L SC  +  +  G+ +
Sbjct: 68  PPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           HG  ++LG+D D+   NAL+++Y+    +    KVF LMP  D VS+N+VI  +A S  +
Sbjct: 128 HGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQS-GM 186

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
             +A++   +M  +   P+  T  ++L   S +     G ++H  VI+  + ++  I ++
Sbjct: 187 YEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSS 246

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  Y K   ++D E++F+ +  RRD +SWNS+++GY+ N    +A+ L   M+    R 
Sbjct: 247 LVDMYAKSARIEDSERVFSHLY-RRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRP 305

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
               F++V+ ACA +ATL  G ++H   +R     ++ I SALVDMYSKCG I  A + F
Sbjct: 306 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIF 365

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           D M + +  SW ++I G+A HGHG +A++LF +MK  G  P+ V FV VL+ACSH GLVD
Sbjct: 366 DRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 425

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           E + +F SM++VYGL  +LE ++ + DLLGRAG+L++  +FI+KM + P   +W T+L +
Sbjct: 426 EAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSS 485

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKK 799
           C  +  +  EL  K A  +F ++ +N   YVL+ NMYAS G+W+++AK R  +++  ++K
Sbjct: 486 C--SVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRK 543

Query: 800 EAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES 859
           +  CSW+ MK+  H FV+GD SHP  D I E LK + ++M   GYV  T   L D++ E 
Sbjct: 544 KPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVADTSGVLHDVDEEH 603

Query: 860 KEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSN 918
           K +L+  HSE++AVAF ++       IR+ KN+R+C DCH A KFISKI  REI++RD++
Sbjct: 604 KRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNS 663

Query: 919 RFHHFNDGKCSCGDYW 934
           RFHHFN G CSCGDYW
Sbjct: 664 RFHHFNRGSCSCGDYW 679



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 228/476 (47%), Gaps = 52/476 (10%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR 168
           Q+H   +++ Q+     ++++I++Y + L+    A  +F+ +E+  +++W S+I  ++ +
Sbjct: 26  QLHAQFIRT-QSLSHTSASIVISIYTN-LKLLHEALLVFKTLESPPVLAWKSVIRCFTDQ 83

Query: 169 GDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL 228
                    F  M+  G      P+   F S++ +   +++      + +   + + G+ 
Sbjct: 84  SLFSRALASFVEMRASG----RCPDHNVFPSVLKSC--TMMMDLRFGESVHGFIVRLGMD 137

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR--------------- 273
            DLY G+AL++ +++L      RK+FE M +K+VVS N ++ G                 
Sbjct: 138 CDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREM 197

Query: 274 --------------------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
                                     KGKE+HGY+IR G+   V +G+ LV+MYAK   I
Sbjct: 198 GTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARI 257

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
           +DS  VF  +  +DS+SWN++++G  QNG Y EA+  F  M    +     +  S + +C
Sbjct: 258 EDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPAC 317

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
           A L  + LG+Q+HG  L+ G   ++ +++AL+ +Y+  G +    K+F  M  HD+VSW 
Sbjct: 318 AHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWT 377

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           ++I   A       EAV  + +M+R G  PN V F+ +L A S   +          + K
Sbjct: 378 AIIMGHA-LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK 436

Query: 488 -YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
            Y +  E     A+    G+ G++++     ++M        W++++S   +H  L
Sbjct: 437 VYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNL 492



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 193/413 (46%), Gaps = 60/413 (14%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+    Q L H  A      + +I++Y  +  L  A  +F  +     ++W  ++  +T 
Sbjct: 29  AQFIRTQSLSHTSA------SIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTD 82

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           + + + A   F EM  +G   +     SVL++C        +FG  VH  +++     D 
Sbjct: 83  QSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMM--MDLRFGESVHGFIVRLGMDCDL 140

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
              N L+ MY   L   D  R++FE +  +D++S+N++I+ Y+Q G    +++   RM R
Sbjct: 141 YTGNALMNMYSKLL-GIDSVRKVFELMPRKDVVSYNTVIAGYAQSG----MYEDALRMVR 195

Query: 184 EGFRYSLKPNEYTFGSL--ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           E     LKP+ +T  S+  I + Y  VL G    ++I   V + G+ SD+Y+GS+LV  +
Sbjct: 196 EMGTSDLKPDAFTLSSVLPIFSEYVDVLKG----KEIHGYVIRKGIDSDVYIGSSLVDMY 251

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------- 274
           A+      + ++F  + +++ +S N L+ G  +                           
Sbjct: 252 AKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFS 311

Query: 275 --------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                         GK++HGY++R G    + + + LV+MY+KCG I  +R +F  M   
Sbjct: 312 SVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLH 371

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           D VSW  +I G   +G   EA+  F  M+R G+  +  + ++ L++C+ +G +
Sbjct: 372 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLV 424



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 169/367 (46%), Gaps = 34/367 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  I++ G   D++  N L+N+Y ++  + S  K+F+ MP ++ VS+  +++GY   GM 
Sbjct: 128 HGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMY 187

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            +A +M +EM  +    + + L SVL    E        G ++H  V++     D  + +
Sbjct: 188 EDALRMVREMGTSDLKPDAFTLSSVLPIFSEY--VDVLKGKEIHGYVIRKGIDSDVYIGS 245

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY       D + R+F  +  RD ISWNS+++ Y Q G      +LF +M     R
Sbjct: 246 SLVDMYAKSARIED-SERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVR 304

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
               P    F S+I A   + L+  +L +Q+   V + G   ++++ SALV  +++ GN 
Sbjct: 305 ----PGAVAFSSVIPAC--AHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNI 358

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY----------LIRSGLFDMVAVGNGL 297
             ARKIF++M   + VS   ++     G  +HG+          + R G+         +
Sbjct: 359 QAARKIFDRMNLHDEVSWTAII----MGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAV 414

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           +   +  G +D++   F  M         T + GL+Q   +  A+ +     R G +   
Sbjct: 415 LTACSHVGLVDEAWGYFNSM---------TKVYGLNQELEHYAAVADLLG--RAGKLEEA 463

Query: 358 FSLISTL 364
           +  IS +
Sbjct: 464 YDFISKM 470


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 271/740 (36%), Positives = 426/740 (57%), Gaps = 70/740 (9%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFD 289
           + ++ + L++ + +LG+   AR +F+ + Q N+ S N L+                    
Sbjct: 39  ETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSA------------------ 80

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
                      Y+K G + D + VF  M   D VSWN+++SG   NG   E++  +  M 
Sbjct: 81  -----------YSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMML 129

Query: 350 RDGLMSSN---FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
           +DG ++ N   FS +  LSS  + G++ LG+QIHG+  K G  S + V + L+ +YA  G
Sbjct: 130 KDGSVNLNRITFSTMLILSS--NRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187

Query: 407 YLSRCLKVF----------------------FL---------MPEHDQVSWNSVIGAFAD 435
           +++   ++F                      F+         MPE D +SW ++I     
Sbjct: 188 FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQ 247

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           +  L  EAV  + +M   G+  +  TF ++L A   F     G Q+HA +I+ +  +   
Sbjct: 248 N-GLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIF 306

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           + +ALL  Y KC  +   E +F +M   ++ +SW +M+ GY  N    +A+ +   M + 
Sbjct: 307 VGSALLDMYCKCRNVKYAEAVFRKM-RHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRN 365

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
               D FT  +V+S+CA++A+LE G + H   + + L   V + +AL+ +Y KCG +++A
Sbjct: 366 EIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHA 425

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
            + F  M +R+  SW +++SGYA+ G  ++ ++LF  M   G +PD VTFVGVLSACS A
Sbjct: 426 HQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRA 485

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           GLV++G+ +F+ M + + + P  + ++CM+DLL RAG L++ + FIN+MP +P+++ W T
Sbjct: 486 GLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWAT 545

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           +L + CR N    E+G+ AA  L ++EPQN  +Y+LL+++YA+ GKW+DVAK RK M+E 
Sbjct: 546 LLSS-CRLN-GNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREM 603

Query: 796 EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
            VKKE G SW+  K+ VH+F A D S P  D IY KL+ L  KM + GYVP   F L D+
Sbjct: 604 GVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDV 663

Query: 856 EPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
           E   K  ++++HSEK+A+AF +L     L IR++KNLRVCGDCH+A K+IS+I  REI++
Sbjct: 664 EKSEKIKMLNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILV 723

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RD+ RFH F DG CSCGD+W
Sbjct: 724 RDAVRFHLFKDGVCSCGDFW 743



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 125/502 (24%), Positives = 208/502 (41%), Gaps = 92/502 (18%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
            +  H    ++F  NTL++ Y ++G L    ++FD MP+ + VSW  ++SGY   G+ +E
Sbjct: 61  NVFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISE 120

Query: 70  ACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV 128
           + +++  M++ G + LNR    ++L      G      G Q+H  + K        V + 
Sbjct: 121 SVRVYNMMLKDGSVNLNRITFSTMLILSSNRG--FVDLGRQIHGQIFKFGYQSYLFVGSP 178

Query: 129 LIAMYGSCLESTDCARRIFEEI-------------------------------ETRDLIS 157
           L+ MY       D A RIFEEI                                 +D IS
Sbjct: 179 LVDMYAKTGFIND-ANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSIS 237

Query: 158 WNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL-- 215
           W +II+  +Q G        F  M  EGF      +++TFGS++TA       G +L   
Sbjct: 238 WTTIITGLTQNGLFKEAVDKFKEMGIEGFCM----DQFTFGSVLTAC------GGFLALD 287

Query: 216 --QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR- 272
             +QI A + +     +++VGSAL+  + +  N  YA  +F +M  KNV+S   ++ G  
Sbjct: 288 EGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYG 347

Query: 273 ----------------------------------------RKGKEVHGYLIRSGLFDMVA 292
                                                    +G + HG  + SGL   V 
Sbjct: 348 QNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVT 407

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           V N L+ +Y KCG+++ +  +F  M  +D VSW  ++SG  Q G   E I  F  M   G
Sbjct: 408 VSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHG 467

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS-NALLSLYADAGYLSRC 411
           ++    + +  LS+C+  G +  G       +K    + +      ++ L + AG L   
Sbjct: 468 IVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEA 527

Query: 412 LKVFFLMP-EHDQVSWNSVIGA 432
                 MP   D + W +++ +
Sbjct: 528 KNFINQMPFSPDAIGWATLLSS 549



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 134/551 (24%), Positives = 254/551 (46%), Gaps = 52/551 (9%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           ++ + NT+I   +R   +  A +LFD MP+++S+SW  I++G T  G+  EA   FKEM 
Sbjct: 203 NIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMG 262

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             GF ++++  GSVL AC   G      G Q+H  +++++   +  V + L+ MY  C  
Sbjct: 263 IEGFCMDQFTFGSVLTACG--GFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKC-R 319

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
           +   A  +F ++  +++ISW +++  Y Q G +    ++F  MQR      + P+++T G
Sbjct: 320 NVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRN----EIHPDDFTLG 375

Query: 199 SLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           S+I+  A  +S+  G+    Q LA    +GL+  + V +AL++ + + G+  +A ++F +
Sbjct: 376 SVISSCANLASLEEGAQFHGQALA----SGLICFVTVSNALITLYGKCGSLEHAHQLFHE 431

Query: 257 MIQKNVVSMNGLMEGRRK-GK-----EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDS 310
           M  ++ VS   L+ G  + GK      +   ++  G+        G+++  ++ G ++  
Sbjct: 432 MKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKG 491

Query: 311 RSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
              F  M+ +  ++     +  MI  L + G  EEA  NF  + +           + LS
Sbjct: 492 YHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEA-KNF--INQMPFSPDAIGWATLLS 548

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL-SLYADAGYLSRCLKVFFLM------ 418
           SC   G + +G+    E L   L+     S  LL S+YA  G      K+   M      
Sbjct: 549 SCRLNGNLEIGKWA-AESLH-KLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVK 606

Query: 419 --PEHDQVSWNSVIGAF-AD------SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
             P H  + + + +  F AD      S+ + ++    YL M   G+ P+    ++ +  +
Sbjct: 607 KEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKS 666

Query: 470 SSFSMGKLGHQVHAQVIKYNVAN-ETTIENALLSCYGKCGEMDDCEKIFARMSER----R 524
               M  L H      I + +      ++  ++     CG+  +  K  +R+++R    R
Sbjct: 667 EKIKM--LNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVR 724

Query: 525 DEVSWNSMISG 535
           D V ++    G
Sbjct: 725 DAVRFHLFKDG 735



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 10/256 (3%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H  I++  +  ++F+ + L+++Y +  ++  A  +F +M  +N +SW  ++ GY 
Sbjct: 288 EGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYG 347

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G S EA ++F +M R     + + LGSV+ +C     +  + G Q H   L S     
Sbjct: 348 QNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANL--ASLEEGAQFHGQALASGLICF 405

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             VSN LI +YG C  S + A ++F E++ RD +SW +++S Y+Q G       LF  M 
Sbjct: 406 VTVSNALITLYGKC-GSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETML 464

Query: 183 REGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             G    + P+  TF G L   + + ++   Y   + +    +   + D Y  + ++   
Sbjct: 465 AHG----IVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHY--TCMIDLL 518

Query: 242 ARLGNFYYARKIFEQM 257
           +R G    A+    QM
Sbjct: 519 SRAGRLEEAKNFINQM 534



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 4/152 (2%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +   L  C       +  ++H   +R     +  + + L++ Y K G +  A   FD +P
Sbjct: 8   YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
             N++SWN+++S Y++ G+      +F  M    P  D V++  +LS  +  GL+ E  +
Sbjct: 68  QPNLFSWNTLLSAYSKLGYLQDMQRVFDSM----PNHDVVSWNSLLSGYAGNGLISESVR 123

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD 715
            +  M +   +      FS M+ L    G +D
Sbjct: 124 VYNMMLKDGSVNLNRITFSTMLILSSNRGFVD 155


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 305/890 (34%), Positives = 446/890 (50%), Gaps = 173/890 (19%)

Query: 48  DRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFG 107
           D + V W   +S Y  KG    A  +F  M R                            
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFNGMRR---------------------------- 88

Query: 108 MQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQ 167
                   +S  T++ ++S  L           DCAR++FE++  RDLISWN ++S Y +
Sbjct: 89  --------RSTVTYNAMISGYL------SNNKFDCARKVFEKMPDRDLISWNVMLSGYVK 134

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
            G+  +   LF++M  +                                           
Sbjct: 135 NGNLSAARALFNQMPEK------------------------------------------- 151

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHG--YLIRS 285
             D+   +A++SGFA+ G    ARKIF+QM+ KN +S NGL+    +   +     L  S
Sbjct: 152 --DVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDS 209

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
            +   +   N L+  Y +   +DD+RS+F  M  +D +SWN MI+G  QN          
Sbjct: 210 KMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQN---------- 259

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
                 GL+S    L   L       W                        A++S +   
Sbjct: 260 ------GLLSEARRLFEELPIRDVFAW-----------------------TAMVSGFVQN 290

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
           G L    ++F  MPE ++VSWN++I  +  S+ +  E  +   D                
Sbjct: 291 GMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQI--EKARELFD---------------- 332

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
                             Q+   N    T+  N +++ Y +CG +D  + +F  M +R D
Sbjct: 333 ------------------QMPSRN----TSSWNTMVTGYAQCGNIDQAKILFDEMPQR-D 369

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
            +SW +MISGY  +    +A++L   M + G  L+    A  LS+CA +A LE G ++H 
Sbjct: 370 CISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHG 429

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
             V+A  +   + G+AL+ MY KCG I+ A   F+ +  +++ SWN+MI+GYARHG G +
Sbjct: 430 RLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKE 489

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
           AL LF  MK+    PD VT VGVLSACSH G VD+G ++F SM Q YG+    + ++CM+
Sbjct: 490 ALALFESMKMTIK-PDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMI 548

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN 765
           DLLGRAG LD+    +  MP  P++  W  +LGA  R +   TELG KAA  +FEMEP N
Sbjct: 549 DLLGRAGRLDEALNLMKSMPFYPDAATWGALLGAS-RIHG-DTELGEKAAEKVFEMEPDN 606

Query: 766 AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
           +  YVLL+N+YA+ G+W +V + R  M++  VKK  G SWV +++  H+F  GD SHPE 
Sbjct: 607 SGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEA 666

Query: 826 DLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLP 884
           + IY  L+EL+ +++  G+V  TK  L D+E E KE ++ YHSEK+AVAF +L+     P
Sbjct: 667 ERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRP 726

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           IR++KNLRVC DCH+A K ISKI  R+I++RDSNRFHHF++G CSCGDYW
Sbjct: 727 IRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 148/543 (27%), Positives = 253/543 (46%), Gaps = 70/543 (12%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+   N +++ YV+ G+L++A  LF++MP+++ VSW  ++SG+   G   EA K+F +M+
Sbjct: 121 DLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML 180

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
               + N  +   +L A  + G       ++    +  S   ++ +  N L+  Y    +
Sbjct: 181 ----VKNEISWNGLLSAYVQNGR------IEDARRLFDSKMDWEIVSWNCLMGGYVR-KK 229

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             D AR +F+ +  RD ISWN +I+ Y+Q G      +LF  +                 
Sbjct: 230 RLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELP---------------- 273

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
                                        + D++  +A+VSGF + G    A +IFE+M 
Sbjct: 274 -----------------------------IRDVFAWTAMVSGFVQNGMLDEATRIFEEMP 304

Query: 259 QKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMV-----AVGNGLVNMYAKCGTIDDSRSV 313
           +KN VS N ++ G  + +++        LFD +     +  N +V  YA+CG ID ++ +
Sbjct: 305 EKNEVSWNAMIAGYVQSQQIEKA---RELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKIL 361

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           F  M  +D +SW  MISG  Q+G  EEA+  F  M+RDG + +  +L   LSSCA +  +
Sbjct: 362 FDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAAL 421

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
            LG+Q+HG  +K G  +     NALL++Y   G +     VF  + E D VSWN++I  +
Sbjct: 422 ELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGY 481

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVAN 492
           A       EA+  +  M+     P+ VT + +L+A S       G +  ++    Y +  
Sbjct: 482 A-RHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITA 539

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI-SGYIH--NELLPKAMNLV 549
                  ++   G+ G +D+   +   M    D  +W +++ +  IH   EL  KA   V
Sbjct: 540 NAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKV 599

Query: 550 WFM 552
           + M
Sbjct: 600 FEM 602



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 146/297 (49%), Gaps = 17/297 (5%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           NT++  Y + G++  A  LFDEMP R+ +SWA ++SGY   G S EA  +F +M R G +
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           LNR AL   L +C E   +  + G Q+H  ++K+      +  N L+AMYG C  S + A
Sbjct: 403 LNRSALACALSSCAEI--AALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKC-GSIEEA 459

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF-GSLIT 202
             +FE+I  +D++SWN++I+ Y++ G       LF     E  + ++KP++ T  G L  
Sbjct: 460 FDVFEDITEKDIVSWNTMIAGYARHGFGKEALALF-----ESMKMTIKPDDVTLVGVLSA 514

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKN 261
            +++  +     ++   +M +  G+ ++    + ++    R G    A  + + M    +
Sbjct: 515 CSHTGFVDKG--MEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPD 572

Query: 262 VVSMNGLMEGRR-KGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSV 313
             +   L+   R  G    G      +F+M    +G    L N+YA  G   + R +
Sbjct: 573 AATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREM 629



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 190/437 (43%), Gaps = 76/437 (17%)

Query: 18  YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM 77
           +++   N L+  YVR   L  A  LFD MP R+ +SW  +++GY   G+ +EA ++F+E+
Sbjct: 213 WEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL 272

Query: 78  ---------------VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                          V+ G L     +   +    E   +    G      + K+ + FD
Sbjct: 273 PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFD 332

Query: 123 GLVS------NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
            + S      N ++  Y  C  + D A+ +F+E+  RD ISW ++IS Y+Q G +     
Sbjct: 333 QMPSRNTSSWNTMVTGYAQC-GNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALH 391

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY------LLQQILAMVKKAGLLSD 230
           LF +M+R+G            G L  +A +  LS         L +Q+   + KAG  + 
Sbjct: 392 LFIKMKRDG------------GILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTG 439

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---GKEVHGYLIRSGL 287
              G+AL++ + + G+   A  +FE + +K++VS N ++ G  +   GKE    L  S  
Sbjct: 440 YIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALA-LFESMK 498

Query: 288 FDMVAVGNGLVNMYAKC---GTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYE 339
             +      LV + + C   G +D     F  M     I  ++  +  MI  L + G  +
Sbjct: 499 MTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLD 558

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG---------LDS 390
           EA+          LM S    +      A+ G ++   +IHG+  +LG         ++ 
Sbjct: 559 EAL---------NLMKS----MPFYPDAATWGALLGASRIHGD-TELGEKAAEKVFEMEP 604

Query: 391 DVSVSNALLS-LYADAG 406
           D S    LLS LYA +G
Sbjct: 605 DNSGMYVLLSNLYAASG 621



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H +++K GF       N L+ +Y + G +  A  +F+++ +++ VSW  +++GY  
Sbjct: 424 GKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYAR 483

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G   EA  +F+ M +     +   L  VL AC   G
Sbjct: 484 HGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTG 519



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 62/300 (20%), Positives = 120/300 (40%), Gaps = 54/300 (18%)

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
           ++ D+V  +  +  Y + G+ + A   F+ M  R+  ++N+MISGY  +   D A  +F 
Sbjct: 56  VDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFE 115

Query: 652 QMK----------LDG-----------------PLPDHVTFVGVLSACSHAGLVDEGFKH 684
           +M           L G                 P  D V++  +LS  +  G V+E  K 
Sbjct: 116 KMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKI 175

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           F  M     L+     ++ ++    + G ++      +      + + W  V   C    
Sbjct: 176 FDQM-----LVKNEISWNGLLSAYVQNGRIEDARRLFD------SKMDWEIVSWNCLMGG 224

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
             + +    A ++   M  ++ +++ ++   YA  G    +++AR+  +E  ++     +
Sbjct: 225 YVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGL---LSEARRLFEELPIRDV--FA 279

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD---AGYVPQTKF----ALFDLEP 857
           W  M  G   FV  +    E   I+E++ E N+   +   AGYV   +      LFD  P
Sbjct: 280 WTAMVSG---FVQ-NGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMP 335


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 263/638 (41%), Positives = 380/638 (59%), Gaps = 7/638 (1%)

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
           MY+K    + +R V R    ++ VSW ++ISGL QNG +  A++ F  MRR+G++ ++F+
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
                 + ASL   + G+QIH   +K G   DV V  +   +Y          K+F  +P
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
           E +  +WN+ I   + ++    EA++ +++ RR    PN +TF   L A S +    LG 
Sbjct: 121 ERNLETWNAFISN-SVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 179

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           Q+H  V++     + ++ N L+  YGKC ++   E IF  M  + + VSW S+++ Y+ N
Sbjct: 180 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAAYVQN 238

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
               KA  L     +       F  ++VLSACA +A LE G  +HA  V+AC+E  + +G
Sbjct: 239 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 298

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG-- 657
           SALVDMY KCG I+ + + FD MP +N+ + NS+I GYA  G  D AL LF +M   G  
Sbjct: 299 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 358

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
           P P+++TFV +LSACS AG V+ G K F SM   YG+ P  E +SC+VD+LGRAG +++ 
Sbjct: 359 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 418

Query: 718 EEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYA 777
            EFI KMPI P   +W  +  AC      K +LG  AA  LF+++P+++ N+VLL+N +A
Sbjct: 419 YEFIKKMPIQPTISVWGALQNACRMHG--KPQLGLLAAENLFKLDPKDSGNHVLLSNTFA 476

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
           + G+W +    R+ +K   +KK AG SW+T+K+ VH F A D SH     I   L +L  
Sbjct: 477 AAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRN 536

Query: 838 KMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGD 896
           +M  AGY P  K +L+DLE E K   VS+HSEK+A+AF +L+    +PIRI KNLR+CGD
Sbjct: 537 EMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGD 596

Query: 897 CHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CHS FKF+S  V REI++RD+NRFH F DG CSC DYW
Sbjct: 597 CHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 634



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 204/422 (48%), Gaps = 18/422 (4%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------GKEVHGYLIR 284
           ++L+SG A+ G+F  A   F +M ++ VV  +       K          GK++H   ++
Sbjct: 27  TSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVK 86

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
            G    V VG    +MY K    DD+R +F  +  ++  +WN  IS    +G   EAI  
Sbjct: 87  CGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEA 146

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F   RR     ++ +  + L++C+    + LG Q+HG  L+ G D+DVSV N L+  Y  
Sbjct: 147 FIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGK 206

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
              +     +F  M   + VSW S++ A+  +      +V  YL  R+     +     +
Sbjct: 207 CKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASV-LYLRSRKDIVETSDFMISS 265

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           +L+A +  +  +LG  +HA  +K  V     + +AL+  YGKCG ++D E+ F  M E +
Sbjct: 266 VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPE-K 324

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQR--GQRLDHFTFATVLSACASVATLERGME 582
           + V+ NS+I GY H   +  A+ L   M  R  G   ++ TF ++LSAC+    +E GM+
Sbjct: 325 NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMK 384

Query: 583 VHACGVRAC--LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYAR 639
           +    +R+   +E      S +VDM  + G ++ A  F   MP++   S W ++ +    
Sbjct: 385 IFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRM 443

Query: 640 HG 641
           HG
Sbjct: 444 HG 445



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 199/497 (40%), Gaps = 67/497 (13%)

Query: 29  VYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYA 88
           +Y ++    SA  +    P RN VSW  ++SG    G  + A   F EM R G + N + 
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE 148
                +A           G Q+H L +K  +  D  V      MY       D AR++F+
Sbjct: 61  FPCAFKAVASLRLP--VTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD-ARKLFD 117

Query: 149 EIETRDLISWNSIISVYSQRG---DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           EI  R+L +WN+ IS     G   + I  F  F R+          PN  TF + + A  
Sbjct: 118 EIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGH-------PNSITFCAFLNACS 170

Query: 206 SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
             +     L  Q+  +V ++G  +D+ V + L+  + +      +  IF +M  KN VS 
Sbjct: 171 DWLHLN--LGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSW 228

Query: 266 NGL-----------------------------------------MEGRRKGKEVHGYLIR 284
             L                                         M G   G+ +H + ++
Sbjct: 229 CSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVK 288

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
           + +   + VG+ LV+MY KCG I+DS   F  M  K+ V+ N++I G    G  + A+  
Sbjct: 289 ACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALAL 348

Query: 345 FCAM--RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GLDSDVSVSNALLSL 401
           F  M  R  G   +  + +S LS+C+  G +  G +I        G++      + ++ +
Sbjct: 349 FEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDM 408

Query: 402 YADAGYLSRCLKVFFLMPEHDQVS-WNSVIGAF----ADSEALVSEAVKYYLDMRRAGWS 456
              AG + R  +    MP    +S W ++  A          L++    + LD + +G  
Sbjct: 409 LGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSG-- 466

Query: 457 PNGVTFINILAAASSFS 473
            N V   N  AAA  ++
Sbjct: 467 -NHVLLSNTFAAAGRWA 482



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 142/315 (45%), Gaps = 16/315 (5%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +L+ GF  DV +CN LI+ Y +   + S+  +F EM  +N+VSW  +V+ Y     
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             +A  ++    +     + + + SVL AC   G +G + G  +H   +K+       V 
Sbjct: 241 DEKASVLYLRSRKDIVETSDFMISSVLSAC--AGMAGLELGRSIHAHAVKACVERTIFVG 298

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L+ MYG C    D + + F+E+  ++L++ NS+I  Y+ +G       LF  M   G 
Sbjct: 299 SALVDMYGKCGCIED-SEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRG- 356

Query: 187 RYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                PN  TF SL++A     +V +G  +     +M    G+       S +V    R 
Sbjct: 357 -CGPTPNYMTFVSLLSACSRAGAVENGMKIFD---SMRSTYGIEPGAEHYSCIVDMLGRA 412

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LV 298
           G    A +  ++M  +  +S+ G ++   R  GK   G L    LF +    +G    L 
Sbjct: 413 GMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLS 472

Query: 299 NMYAKCGTIDDSRSV 313
           N +A  G   ++ +V
Sbjct: 473 NTFAAAGRWAEANTV 487


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 282/790 (35%), Positives = 449/790 (56%), Gaps = 34/790 (4%)

Query: 159 NSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQI 218
           N ++  + QRGD     KLF  M          P++  F S  T     + SG+    + 
Sbjct: 105 NFLVKSFLQRGDLNGARKLFDEM----------PHKNIF-STNTMIMGYIKSGNLSEART 153

Query: 219 L--AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLMEG- 271
           L  +M ++  +   + +G     G+A+   F  A  +F +M    I  + VS+  L+ G 
Sbjct: 154 LFDSMFQRTAVTWTMLIG-----GYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGF 208

Query: 272 -----RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                  + ++VH ++I+ G    + V N L++ Y K  ++  +  +F  +  +DSV++N
Sbjct: 209 TEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFN 268

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            +++G  + G   EAI  F  M+  G   + F+  + L++   L  I  GQQ+HG  +K 
Sbjct: 269 ALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKC 328

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
               +V V+NALL  Y+    +    K+F+ MPE D +S+N ++  +A     V E+++ 
Sbjct: 329 NFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYA-WNGRVKESLEL 387

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
           + +++  G+      F  +L+ A+      +G Q+H+Q I  +  +E  + N+L+  Y K
Sbjct: 388 FKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAK 447

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
           CGE  +  +IF+ ++  +  V W +MIS Y+   L    + L   M +     D  T+A+
Sbjct: 448 CGEFGEANRIFSDLA-IQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYAS 506

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           ++ ACAS+A+L  G ++H+  + +    +V  GSALVDMY+KCG I  A + F  MPVRN
Sbjct: 507 IVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRN 566

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
             SWN++IS YA++G GD  L LF +M   G  PD V+ + +L ACSH GLV+EG ++F 
Sbjct: 567 SVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFD 626

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
           SM+++Y L+P+ E ++  +D+L R G  D+ E+ + +MP  P+ ++W +VL +C     +
Sbjct: 627 SMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSC--GIHK 684

Query: 747 KTELGRKAANMLFEMEP-QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSW 805
             EL +KAAN LF M+  ++A  YV ++N+YA+ G+W++V K +KAM+E  VKK    SW
Sbjct: 685 NQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSW 744

Query: 806 VTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVS 865
           V +K   HVF A D++HP+   I +KL EL +KM   GY P +  AL +++ E K + + 
Sbjct: 745 VEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLK 804

Query: 866 YHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFN 924
           YHSE+IA+AF L    +  PI +MKNLR C DCH+A K ISKIV REI +RDS+RFHHF 
Sbjct: 805 YHSERIAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVRREITVRDSSRFHHFR 864

Query: 925 DGKCSCGDYW 934
           DG C+C DYW
Sbjct: 865 DGFCTCRDYW 874



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 163/600 (27%), Positives = 285/600 (47%), Gaps = 61/600 (10%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           ++F  NT+I  Y++ G+L+ A  LFD M  R +V+W  ++ GY       EA  +F EM 
Sbjct: 131 NIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMG 190

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           R G   +  +L ++L    E          QVH  V+K       +VSN L+  Y     
Sbjct: 191 RHGIDPDHVSLATLLSGFTEF--DSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKT-R 247

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
           S   A ++F +I  RD +++N++++ YS+ G       LF +MQ  G+R    P E+TF 
Sbjct: 248 SLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYR----PTEFTFA 303

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           +++TA     L      QQ+   V K   + +++V +AL+  +++      A K+F +M 
Sbjct: 304 AILTAGIQ--LDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMP 361

Query: 259 QKNVVSMNGLM-----EGRRK------------------------------------GKE 277
           + + +S N L+      GR K                                    G++
Sbjct: 362 EVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQ 421

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +H   I +     + VGN LV+MYAKCG   ++  +F  +  + SV W  MIS   Q G 
Sbjct: 422 IHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGL 481

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
           +E+ +  F  M+R  + +   +  S + +CASL  + LG+Q+H   +  G  S+V   +A
Sbjct: 482 HEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSA 541

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA---DSEALVSEAVKYYLDMRRAG 454
           L+ +YA  G +   L++F  MP  + VSWN++I A+A   D +      ++ + +M R+G
Sbjct: 542 LVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDC----TLRLFEEMVRSG 597

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDC 513
             P+ V+ ++IL A S   + + G Q    + + Y +  +     + +    + G  D+ 
Sbjct: 598 LQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEA 657

Query: 514 EKIFARMSERRDEVSWNSMISG---YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
           EK+ A+M    DE+ W+S+++    + + EL  KA N ++ M        + T + + +A
Sbjct: 658 EKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAA 717



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 246/520 (47%), Gaps = 33/520 (6%)

Query: 220 AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVH 279
           A + K G   + Y  + LV  F + G+   ARK+F++M  KN+ S N ++ G        
Sbjct: 90  ASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMG-------- 141

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
                                Y K G + ++R++F  M  + +V+W  +I G  QN  + 
Sbjct: 142 ---------------------YIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFR 180

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           EA   F  M R G+   + SL + LS       +   +Q+H   +KLG DS + VSN+LL
Sbjct: 181 EAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLL 240

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
             Y     L    ++F  +PE D V++N+++  ++  E    EA+  +  M+  G+ P  
Sbjct: 241 DSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYS-KEGFNREAINLFFKMQEVGYRPTE 299

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
            TF  IL A       + G QVH  V+K N      + NALL  Y K   + +  K+F  
Sbjct: 300 FTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYE 359

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           M E  D +S+N +++ Y  N  + +++ L   +   G    +F FAT+LS  A    L+ 
Sbjct: 360 MPE-VDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDI 418

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G ++H+  +      ++++G++LVDMY+KCG    A+R F  + +++   W +MIS Y +
Sbjct: 419 GRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQ 478

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
            G  +  L LF +M+      D  T+  ++ AC+    +  G K   S     G I  + 
Sbjct: 479 KGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLG-KQLHSHIIGSGYISNVF 537

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
             S +VD+  + G +    +   +MP+  NS+ W  ++ A
Sbjct: 538 SGSALVDMYAKCGSIKDALQMFQEMPVR-NSVSWNALISA 576



 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 140/531 (26%), Positives = 251/531 (47%), Gaps = 55/531 (10%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H  ++K G+   + + N+L++ Y +   L  A +LF+++P+R+SV++  +++GY+
Sbjct: 216 EVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYS 275

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            +G + EA  +F +M   G+    +   ++L A  +      +FG QVH  V+K N  ++
Sbjct: 276 KEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQL--DDIEFGQQVHGFVVKCNFVWN 333

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V+N L+  Y       + A ++F E+   D IS+N +++ Y+  G      +LF  +Q
Sbjct: 334 VFVANALLDFYSKHDRVVE-ASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQ 392

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             GF        + F +L++ A  S+     + +QI +       +S++ VG++LV  +A
Sbjct: 393 FTGF----DRRNFPFATLLSIAAISL--NLDIGRQIHSQTIVTDAISEILVGNSLVDMYA 446

Query: 243 RLGNFYYARKIFEQM-IQKNV--------VSMNGLMEGRRK------------------- 274
           + G F  A +IF  + IQ +V            GL E   K                   
Sbjct: 447 KCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYAS 506

Query: 275 -------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                        GK++H ++I SG    V  G+ LV+MYAKCG+I D+  +F+ M  ++
Sbjct: 507 IVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRN 566

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
           SVSWN +IS   QNG  +  +  F  M R GL   + SL+S L +C+  G +  G Q   
Sbjct: 567 SVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFD 626

Query: 382 EGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA--FADSE 437
              ++  L        + + +    G      K+   MP E D++ W+SV+ +     ++
Sbjct: 627 SMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQ 686

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF-SMGKLGHQVHAQVIK 487
            L  +A     +M+    +   VT  NI AAA  + ++GK+   +  + +K
Sbjct: 687 ELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVK 737


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 269/696 (38%), Positives = 408/696 (58%), Gaps = 41/696 (5%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYA--KCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           K++H  +I++GL +     + L+   A    G +  + S+F+ +   + V WN MI GL 
Sbjct: 45  KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLS 104

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            +     A+  +  M   G   + ++  S   SC  +     G+Q+H   LKLGL+ +  
Sbjct: 105 SSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAF 164

Query: 394 VSNALLSLYA------------------DA-------------GYLSRCLKVFFLMPEHD 422
           V  +L+++YA                  DA             G+L    ++F  +P  D
Sbjct: 165 VHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRD 224

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA-ASSFSMGKLGHQV 481
            VSWN++I  +A S   V EA+ ++ +MRRA  +PN  T +++L+A A S S  +LG+ V
Sbjct: 225 VVSWNAMISGYAQS-GRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWV 283

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
            + +    + +   + N L+  Y KCG++++   +F ++ ++ + VSWN MI GY H   
Sbjct: 284 RSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDK-NVVSWNVMIGGYTHMSC 342

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR--ACLEFDVVIG 599
             +A+ L   MMQ     +  TF ++L ACA++  L+ G  VHA   +    ++  V + 
Sbjct: 343 YKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALW 402

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           ++L+DMY+KCG +  A R FD M  +++ +WN+MISG+A HGH D AL LFS+M  +G +
Sbjct: 403 TSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFV 462

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           PD +TFVGVL+AC HAGL+  G ++F SM Q Y + P+L  + CM+DL GRAG  D+ E 
Sbjct: 463 PDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAET 522

Query: 720 FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASG 779
            +  M + P+  IW ++LGA CR + R+ EL    A  LFE+EP+N   YVLL+N+YA  
Sbjct: 523 LVKNMEMKPDGAIWCSLLGA-CRIH-RRIELAESVAKHLFELEPENPSAYVLLSNIYAGA 580

Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
           G+WEDVAK R  + +  +KK  GCS + +   VH F+ GD+ HP+ + IY+ L E++ ++
Sbjct: 581 GRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRL 640

Query: 840 RDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCH 898
             AG+VP T   L+D++ E KE ++S+HSEK+A+AF +++      IRIMKNLRVCG+CH
Sbjct: 641 EKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCH 700

Query: 899 SAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           SA K ISKI  REI+ RD NRFHHF DG CSC DYW
Sbjct: 701 SATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 144/533 (27%), Positives = 237/533 (44%), Gaps = 73/533 (13%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A  +F+ I   + + WN +I   S         + +  M   G     +PNEYTF S+  
Sbjct: 81  ALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSG----TEPNEYTFPSIFK 136

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
           +   + + G++  +Q+ A V K GL  + +V ++L++ +A+ G    AR +F++   ++ 
Sbjct: 137 SC--TKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDA 194

Query: 263 VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
           VS   L+ G                             YA  G +D++R +F  +  +D 
Sbjct: 195 VSFTALITG-----------------------------YASKGFLDEARELFDEIPVRDV 225

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG-WIMLGQQIHG 381
           VSWN MISG  Q+G  EEA+  F  MRR  +  +  +++S LS+CA  G  + LG  +  
Sbjct: 226 VSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRS 285

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
                GL S++ + N L+ +Y   G L     +F  + + + VSWN +IG +    +   
Sbjct: 286 WIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHM-SCYK 344

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTIENA 499
           EA+  +  M ++   PN VTF++IL A ++     LG  VHA V K   ++ N   +  +
Sbjct: 345 EALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTS 404

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  Y KCG++   ++IF  M+  +   +WN+MISG+  +     A+ L   M   G   
Sbjct: 405 LIDMYAKCGDLAVAKRIFDCMNT-KSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVP 463

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           D  TF  VL+AC     L                                GR  ++S   
Sbjct: 464 DDITFVGVLTACKHAGLLS------------------------------LGRRYFSSMIQ 493

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
           D      +  +  MI  + R G  D+A TL   M++    PD   +  +L AC
Sbjct: 494 DYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMK---PDGAIWCSLLGAC 543



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 188/394 (47%), Gaps = 50/394 (12%)

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA--DAGYLSRCLKVFFLM 418
           ++ LS+C +L  +   +QIH + +K GL +     + L+   A    G LS  L +F  +
Sbjct: 32  LTLLSNCKTLQTL---KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTI 88

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
              + V WN +I   + SE+    A++YY+ M  +G  PN  TF +I  + +       G
Sbjct: 89  RNPNHVIWNHMIRGLSSSESPFL-ALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEG 147

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER--------------- 523
            QVHA V+K  + +   +  +L++ Y + GE+ +   +F + S R               
Sbjct: 148 KQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASK 207

Query: 524 ---------------RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
                          RD VSWN+MISGY  +  + +AM     M +     +  T  +VL
Sbjct: 208 GFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVL 267

Query: 569 SACA-SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           SACA S ++L+ G  V +      L  ++ + + L+DMY KCG ++ AS  F+ +  +NV
Sbjct: 268 SACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNV 327

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF----- 682
            SWN MI GY       +AL LF +M      P+ VTF+ +L AC++ G +D G      
Sbjct: 328 VSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAY 387

Query: 683 --KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
             K+ KSM     L      ++ ++D+  + G+L
Sbjct: 388 VDKNMKSMKNTVAL------WTSLIDMYAKCGDL 415



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 145/596 (24%), Positives = 236/596 (39%), Gaps = 119/596 (19%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLIN--VYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           K  H QI+K G     F  + LI        GDL+ A  LF  + + N V W  ++ G +
Sbjct: 45  KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLS 104

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                  A + +  M+ +G   N Y   S+ ++C +    G   G QVH  VLK     +
Sbjct: 105 SSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKI--RGAHEGKQVHAHVLKLGLEHN 162

Query: 123 GLVSNVLIAMYGSCLEST------------------------------DCARRIFEEIET 152
             V   LI MY    E                                D AR +F+EI  
Sbjct: 163 AFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPV 222

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGS 212
           RD++SWN++IS Y+Q G        F  M+R      + PN  T  S+++A   S  S  
Sbjct: 223 RDVVSWNAMISGYAQSGRVEEAMAFFEEMRRA----KVTPNVSTMLSVLSACAQSG-SSL 277

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG- 271
            L   + + ++  GL S++ + + L+  + + G+   A  +FE++  KNVVS N ++ G 
Sbjct: 278 QLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGY 337

Query: 272 -------------RRK---------------------------GKEVHGYLIRS--GLFD 289
                        RR                            GK VH Y+ ++   + +
Sbjct: 338 THMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKN 397

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
            VA+   L++MYAKCG +  ++ +F  M  K   +WN MISG   +G  + A+  F  M 
Sbjct: 398 TVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMT 457

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
            +G +  + + +  L++C   G + LG++     ++     D  VS  L           
Sbjct: 458 SEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQ-----DYKVSPKLPHYGCMIDLFG 512

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
           R                    G F ++E LV       ++M+     P+G  + ++L A 
Sbjct: 513 RA-------------------GLFDEAETLVKN-----MEMK-----PDGAIWCSLLGAC 543

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLS-CYGKCGEMDDCEKIFARMSERR 524
                 +L   V   + +    N +     LLS  Y   G  +D  KI  R+++ R
Sbjct: 544 RIHRRIELAESVAKHLFELEPENPSAY--VLLSNIYAGAGRWEDVAKIRTRLNDNR 597



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 130/523 (24%), Positives = 228/523 (43%), Gaps = 83/523 (15%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASAS-------------------- 40
           + + K  H  +LK G  ++ F+  +LIN+Y + G+L +A                     
Sbjct: 144 AHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITG 203

Query: 41  -----------KLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYAL 89
                      +LFDE+P R+ VSW  ++SGY   G   EA   F+EM RA    N   +
Sbjct: 204 YASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTM 263

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
            SVL AC + G S  + G  V   +       +  + N LI MY  C +  + A  +FE+
Sbjct: 264 LSVLSACAQSG-SSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEE-ASNLFEK 321

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
           I+ ++++SWN +I  Y+          LF RM +     ++ PN+ TF S++ A  +  L
Sbjct: 322 IQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQS----NIDPNDVTFLSILPACAN--L 375

Query: 210 SGSYLLQQILAMVKK--AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
               L + + A V K    + + + + ++L+  +A+ G+   A++IF+ M  K++ + N 
Sbjct: 376 GALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNA 435

Query: 268 LMEGRRKGKEVHGYLIRS-GLFD-MVAVG--------NGLVNMYAKCGTIDDSRSVFRFM 317
           ++ G      +HG+   + GLF  M + G         G++      G +   R  F  M
Sbjct: 436 MISGF----AMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSM 491

Query: 318 IGKDSVS-----WNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCASL 370
           I    VS     +  MI    + G ++EA  ++    M+ DG +       S L +C   
Sbjct: 492 IQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAI-----WCSLLGACRIH 546

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM--------PEHD 422
             I L + +     +L  + + S    L ++YA AG      K+   +        P   
Sbjct: 547 RRIELAESVAKHLFELEPE-NPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCS 605

Query: 423 QVSWNSVIGAFADSEALVSEAVKYY-----LDMR--RAGWSPN 458
            +  +SV+  F   + +  ++ + Y     +DMR  +AG+ P+
Sbjct: 606 SIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPD 648


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 285/801 (35%), Positives = 441/801 (55%), Gaps = 55/801 (6%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A ++F+++  ++ IS N +IS + + G      +LF  M                    T
Sbjct: 62  AHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVER-----------------T 104

Query: 203 AAYSSVLSGSYLLQ-------QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
           A   ++L G YL         ++ A +++ G+  D      L+SGF  L           
Sbjct: 105 AVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELET--------- 155

Query: 256 QMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
               KNV+             ++H ++I+ G    + V N LV+ Y K   +  +  +F+
Sbjct: 156 ----KNVIV------------QIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK 199

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M+ KD+V++N++++G    G  EEAI  F  +   G+  S+F+  + LS+   L     
Sbjct: 200 HMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKF 259

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           GQQ+HG  LK     +V V NALL  Y+    +    K+F+ MPE D +S+N VI ++A 
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYA- 318

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
                 E+   +  ++   +      F  +L+ A+S    ++G Q+H Q I      E+ 
Sbjct: 319 WNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR 378

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           +ENAL+  Y KC    + +KIF  ++  +  V W +MIS Y+      + +N+   M + 
Sbjct: 379 VENALVDMYAKCNGDKEAQKIFDNIA-CKSTVPWTAMISAYVQKGKHEEGINVFSDMRRT 437

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G   D  TFA++L ACA++A++  G ++H+  +R+    +V  GSAL+D Y+KCG +  A
Sbjct: 438 GVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDA 497

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
            + F  MP RN  SWN++IS YA++G+ D  L  F QM   G  PD V+F+ VLSACSH 
Sbjct: 498 IKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHC 557

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           G V+E   HF SM+Q+Y + P+ E ++ MVD+L R G  D+ E+ + +MP  P+ ++W +
Sbjct: 558 GFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSS 617

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEP-QNAVNYVLLANMYASGGKWEDVAKARKAMKE 794
           VL + CR + +  EL +KAA+ LF ME  ++A  Y+ ++N+YA  G+W++VAK +KAM++
Sbjct: 618 VLNS-CRIH-KNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRD 675

Query: 795 AEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFD 854
             V+K    SWV +K   HVF A D+SHPE   I  K+  L+++M   GY P T  AL D
Sbjct: 676 RGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHD 735

Query: 855 LEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIV 913
           ++   K + + YHSE+ A+AF L       PI +MKNLR C DCH+A K IS+IV REI+
Sbjct: 736 VDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREII 795

Query: 914 LRDSNRFHHFNDGKCSCGDYW 934
           +RDS+RFHHF DG CSCGDYW
Sbjct: 796 VRDSSRFHHFKDGVCSCGDYW 816



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 164/592 (27%), Positives = 284/592 (47%), Gaps = 63/592 (10%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           Q+     A +    N +I+ +++ G L+ A +LFD M +R +VSW  ++ GY     S E
Sbjct: 64  QVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKE 123

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
           A +++ +M R G   +   L ++L    E         +Q+H  V+K    ++ +V N L
Sbjct: 124 AFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVI--VQIHTHVIKLGYEYNLMVCNSL 181

Query: 130 IAMYGSCLESTDC---ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           +  Y  C   T C   A ++F+ +  +D +++NS+++ YS  G      +LF  +   G 
Sbjct: 182 VDAY--C--KTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSG- 236

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              +KP+++TF +L++AA    L  +   QQ+   V K   + +++VG+AL+  +++   
Sbjct: 237 ---IKPSDFTFAALLSAAVG--LDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQ 291

Query: 247 FYYARKIFEQM-----IQKNVVSMNGLMEGR----------------------------- 272
                K+F +M     I  NVV  +    G+                             
Sbjct: 292 VDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSI 351

Query: 273 -------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                  R G+++H   I  G      V N LV+MYAKC    +++ +F  +  K +V W
Sbjct: 352 ATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPW 411

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
             MIS   Q G +EE I  F  MRR G+ +   +  S L +CA+L  I LG+Q+H   ++
Sbjct: 412 TAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIR 471

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G  S+V   +ALL  YA  G ++  +K F  MPE + VSWN++I A+A +   V   + 
Sbjct: 472 SGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQN-GNVDGTLN 530

Query: 446 YYLDMRRAGWSPNGVTFINILAAAS--SFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
            +  M ++G+ P+ V+F+++L+A S   F    L H  ++    Y V  +     +++  
Sbjct: 531 SFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWH-FNSMTQIYEVTPKREHYTSMVDV 589

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMI-SGYIH--NELLPKAMNLVWFM 552
             + G  D+ EK+   M     E+ W+S++ S  IH  +EL  KA + ++ M
Sbjct: 590 LCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNM 641



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 202/407 (49%), Gaps = 50/407 (12%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K G+ Y++ +CN+L++ Y +   L  AS+LF  M ++++V++  +++GY+++G++
Sbjct: 163 HTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLN 222

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA ++F E+  +G   + +   ++L A    G    KFG QVH  VLK+N  ++  V N
Sbjct: 223 EEAIELFLELHNSGIKPSDFTFAALLSAA--VGLDDTKFGQQVHGFVLKTNFVWNVFVGN 280

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+  Y S  +  D   ++F E+   D IS+N +I+ Y+  G     F LF ++Q   F 
Sbjct: 281 ALLDYY-SKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRF- 338

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
                 ++ F +L++ A SS+     + +QI       G   +  V +ALV  +A+    
Sbjct: 339 ---DRRQFPFATLLSIATSSL--NLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGD 393

Query: 248 YYARKIFEQMIQKNVVSMNGLM----------EG-------RRK---------------- 274
             A+KIF+ +  K+ V    ++          EG       RR                 
Sbjct: 394 KEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRAC 453

Query: 275 --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                   G+++H  LIRSG    V  G+ L++ YAKCG + D+   F  M  ++SVSWN
Sbjct: 454 ANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWN 513

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
            +IS   QNG  +  + +F  M + G    + S +S LS+C+  G++
Sbjct: 514 ALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFV 560



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 172/354 (48%), Gaps = 42/354 (11%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +K  +  H  +LK  F ++VF+ N L++ Y +   +    KLF EMP+ + +S+  +++ 
Sbjct: 257 TKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITS 316

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y   G   E+  +F+++    F   ++   ++L           + G Q+HC  +     
Sbjct: 317 YAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIA--TSSLNLRMGRQIHCQAITVGAN 374

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
           F+  V N L+ MY  C    + A++IF+ I  +  + W ++IS Y Q+G       +FS 
Sbjct: 375 FESRVENALVDMYAKCNGDKE-AQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSD 433

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M+R G    +  ++ TF S++ A  +  L+   L +Q+ +++ ++G +S++Y GSAL+  
Sbjct: 434 MRRTG----VPADQATFASILRACAN--LASISLGRQLHSLLIRSGFMSNVYSGSALLDT 487

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
           +A+ G    A K F +M ++N VS                              N L++ 
Sbjct: 488 YAKCGCMTDAIKSFGEMPERNSVSW-----------------------------NALISA 518

Query: 301 YAKCGTIDDSRSVFRFMI----GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           YA+ G +D + + F+ MI      DSVS+ +++S     G  EEA+ +F +M +
Sbjct: 519 YAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQ 572



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 14/149 (9%)

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           V+ + + G + +A + FD MP +N  S N MISG+ + G   KA  LF  M     +   
Sbjct: 50  VNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWT 109

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD------K 716
           +   G L     +    E F+ +  M +  G+ P    +  +V LL   GEL+      +
Sbjct: 110 ILIGGYL----QSNQSKEAFRLYADMRRG-GIEP---DYVTLVTLLSGFGELETKNVIVQ 161

Query: 717 IEEFINKMPITPNSLIWRTVLGACCRANC 745
           I   + K+    N ++  +++ A C+ +C
Sbjct: 162 IHTHVIKLGYEYNLMVCNSLVDAYCKTHC 190


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 272/718 (37%), Positives = 421/718 (58%), Gaps = 22/718 (3%)

Query: 235 SALVSGFARLGNFYYARKIF----------EQMIQKNVVSMNGLMEGRRKGKEVHGYLIR 284
           ++L+SG+ ++G ++    +F          ++    N +S+ G     R G+ +H  +  
Sbjct: 10  NSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITV 69

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
           SGL   V + N L++MY KCG ID +R VF      DSVSWN++I+G  + G  +E +  
Sbjct: 70  SGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRL 129

Query: 345 FCAMRRDGLMSSNFSLISTLSSCAS--LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
              M R GL  ++++L S L +C S     I  G+ +HG  +KLGLD DV V  ALL  Y
Sbjct: 130 LVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTY 189

Query: 403 ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV----SEAVKYYLDMRRAGWSPN 458
           A  G L    K+F LMP+ + V +N++I  F   E +     +EA+  + +M+  G  P+
Sbjct: 190 AKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPS 249

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
             TF +IL A S+    + G Q+HAQ+ KYN+ ++  I NAL+  Y   G ++D  K F 
Sbjct: 250 EFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCF- 308

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
             + + D VSW S+I G++ N      + L   ++  G++ D FT + +LSACA++A ++
Sbjct: 309 HSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVK 368

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
            G ++HA  ++  +    +I ++ + MY+KCG ID A+  F      ++ SW+ MIS  A
Sbjct: 369 SGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNA 428

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
           +HG   +A+ LF  MK  G  P+H+TF+GVL ACSH GLV+EG ++F+ M + +G+ P +
Sbjct: 429 QHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNV 488

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
           +  +C+VDLLGRAG L + E FI       + ++WR++L A CR + + T+ G++ A  +
Sbjct: 489 KHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSA-CRVH-KATDTGKRVAERV 546

Query: 759 FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
            E+EP+ A +YVLL N+Y   G      + R  MK+  VKKE G SW+ + + VH FVAG
Sbjct: 547 IELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAG 606

Query: 819 DESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKED-LVSYHSEKIAVAF-V 876
           D SHP   +IY +L+E+ ++++   Y+ + K      EP+ K++ +VSYHSEK+AV F +
Sbjct: 607 DRSHPNSQVIYVQLEEMLEEIKKLDYIDE-KLVSDASEPKHKDNSMVSYHSEKLAVTFGI 665

Query: 877 LTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           ++     P+R+MKNLR C  CH   K  S++  REI+LRD  RFH F DG CSCGDYW
Sbjct: 666 ISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDYW 723



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 145/538 (26%), Positives = 240/538 (44%), Gaps = 57/538 (10%)

Query: 46  MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFK 105
           MP RN VSW  ++SGYT  G  +E   +FKE   +   L+++   + L  C        +
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT--LDLR 58

Query: 106 FGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY 165
            G  +H L+  S      L++N LI MY  C    D AR +FE  +  D +SWNS+I+ Y
Sbjct: 59  LGRLIHALITVSGLGGPVLLTNSLIDMYCKC-GRIDWARLVFESADELDSVSWNSLIAGY 117

Query: 166 SQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKA 225
            + G    + +L  +M R G    L  N Y  GS + A  S+  S     + +     K 
Sbjct: 118 VRIGSNDEMLRLLVKMLRHG----LNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKL 173

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------- 274
           GL  D+ VG+AL+  +A++G+   A KIF+ M   NVV  N ++ G  +           
Sbjct: 174 GLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANE 233

Query: 275 -----------------------------------GKEVHGYLIRSGLFDMVAVGNGLVN 299
                                              GK++H  + +  L     +GN LV 
Sbjct: 234 AMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVE 293

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
           +Y+  G+I+D    F      D VSW ++I G  QNG +E  +  F  +   G     F+
Sbjct: 294 LYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFT 353

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           +   LS+CA+L  +  G+QIH   +K G+ +   + N+ + +YA  G +      F    
Sbjct: 354 ISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETK 413

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             D VSW+ +I + A       EAV  +  M+ +G +PN +TF+ +L A S   + + G 
Sbjct: 414 NPDIVSWSVMISSNA-QHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGL 472

Query: 480 QVHAQVIKYNVANETTIENA--LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           + + +++K +      ++++  ++   G+ G + + E          D V W S++S 
Sbjct: 473 R-YFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSA 529



 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 214/442 (48%), Gaps = 19/442 (4%)

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M  ++ VSWN++ISG  Q G Y E +  F   R   L    F+  + LS C     + LG
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           + IH      GL   V ++N+L+ +Y   G +     VF    E D VSWNS+I  +   
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINIL-AAASSFSMG-KLGHQVHAQVIKYNVANET 494
            +   E ++  + M R G + N     + L A  S+FS   + G  +H   +K  +  + 
Sbjct: 121 GS-NDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDV 179

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH-----NELLPKAMNLV 549
            +  ALL  Y K G+++D  KIF  M +  + V +N+MI+G++      +E   +AM L 
Sbjct: 180 VVGTALLDTYAKIGDLEDATKIFKLMPD-PNVVMYNAMIAGFLQMETMADEFANEAMYLF 238

Query: 550 WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
           + M  RG +   FTF+++L AC+++   E G ++HA   +  L+ D  IG+ALV++YS  
Sbjct: 239 FEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLS 298

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
           G I+   + F   P  +V SW S+I G+ ++G  +  LTLF ++   G  PD  T   +L
Sbjct: 299 GSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIML 358

Query: 670 SACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD----LLGRAGELDKIEEFINKMP 725
           SAC++   V  G          Y +   +  F+ + +    +  + G++D       K  
Sbjct: 359 SACANLAAVKSG-----EQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDS-ANMTFKET 412

Query: 726 ITPNSLIWRTVLGACCRANCRK 747
             P+ + W  ++ +  +  C K
Sbjct: 413 KNPDIVSWSVMISSNAQHGCAK 434



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 224/480 (46%), Gaps = 61/480 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +L H  I   G    V L N+LI++Y + G +  A  +F+   + +SVSW  +++GY  
Sbjct: 60  GRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVR 119

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G ++E  ++  +M+R G  LN YALGS L+AC     S  + G  +H   +K     D 
Sbjct: 120 IGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDV 179

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK-----LF 178
           +V   L+  Y    +  D A +IF+ +   +++ +N++I+ + Q       F      LF
Sbjct: 180 VVGTALLDTYAKIGDLED-ATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLF 238

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
             MQ  G    +KP+E+TF S++ A   S +      +QI A + K  L SD ++G+ALV
Sbjct: 239 FEMQSRG----MKPSEFTFSSILKAC--STIEAFECGKQIHAQIFKYNLQSDEFIGNALV 292

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVS---------MNGLMEGR----------------- 272
             ++  G+     K F    + +VVS          NG  EG                  
Sbjct: 293 ELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEF 352

Query: 273 ---------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                          + G+++H Y I++G+ +   + N  + MYAKCG ID +   F+  
Sbjct: 353 TISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKET 412

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
              D VSW+ MIS   Q+GC +EA+  F  M+  G+  ++ + +  L +C+  G +  G 
Sbjct: 413 KNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGL 472

Query: 378 QIHGEGLKL--GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP---EHDQVSWNSVIGA 432
           + + E +K   G+  +V  S  ++ L   AG L+      F+M    E D V W S++ A
Sbjct: 473 R-YFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAES--FIMDSGFEGDPVMWRSLLSA 529



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 114/243 (46%), Gaps = 2/243 (0%)

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
           +R+ VSWNS+ISGY       + MNL         RLD FTF+  LS C     L  G  
Sbjct: 3   KRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRL 62

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
           +HA    + L   V++ ++L+DMY KCGRID+A   F+     +  SWNS+I+GY R G 
Sbjct: 63  IHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGS 122

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSAC-SHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
            D+ L L  +M   G   +       L AC S+     E  K     +   GL   +   
Sbjct: 123 NDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVG 182

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM 761
           + ++D   + G+L+   +    MP  PN +++  ++    +      E   +A  + FEM
Sbjct: 183 TALLDTYAKIGDLEDATKIFKLMP-DPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEM 241

Query: 762 EPQ 764
           + +
Sbjct: 242 QSR 244



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 46/99 (46%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H   +K G      + N+ I +Y + GD+ SA+  F E  + + VSW+ ++S  
Sbjct: 368 KSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSN 427

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G + EA  +F+ M  +G   N      VL AC   G
Sbjct: 428 AQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGG 466


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 281/793 (35%), Positives = 447/793 (56%), Gaps = 45/793 (5%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           AR +F+++  +++ S N I+S YS  GD  +   LF          S      T  +++ 
Sbjct: 62  ARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF---------LSSPHRNATTWTIMM 112

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
            A+++    S  L    AM+ + G++ D                         ++    V
Sbjct: 113 RAHAAAGRTSDALSLFRAMLGE-GVIPD-------------------------RVTVTTV 146

Query: 263 VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
           +++ G          +H + I+ GL   V V N L++ Y K G +  +R VF  M  KD+
Sbjct: 147 LNLPGCTV-----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDA 201

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           V++N M+ G  + G + +A+  F AMRR G+ +++F+  S L+  A +  ++LG Q+H  
Sbjct: 202 VTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHAL 261

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            L+     +V V+N+LL  Y+    L    ++F  MPE D VS+N +I A+A ++   + 
Sbjct: 262 VLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQC-AAT 320

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
            ++ + +M++ G+    + +  +L+ A S     +G Q+HAQ++   +A+E  + NAL+ 
Sbjct: 321 VLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALID 380

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            Y KCG +D  +  F+  SE+   +SW ++I+GY+ N    +A+ L   M + G R D  
Sbjct: 381 MYSKCGMLDAAKSNFSNRSEK-SAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRA 439

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           TF++++ A +S+A +  G ++H+  +R+  +  V  GS LVDMY+KCG +D A R FD M
Sbjct: 440 TFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEM 499

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
           P RN  SWN++IS YA +G    A+ +F  M   G  PD VTF+ VL+ACSH GL DE  
Sbjct: 500 PERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECM 559

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
           K+F  M   Y + P  E ++C++D LGR G   ++++ + +MP   + +IW ++L + CR
Sbjct: 560 KYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHS-CR 618

Query: 743 ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
            +  + EL R AA+ LF MEP +A  YV+L+N+YA  G+WED A  +K M++  V+KE+G
Sbjct: 619 IHGNQ-ELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESG 677

Query: 803 CSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKED 862
            SWV +K  ++ F + D + P  D I ++L  L ++M   GY P    AL  ++ E K +
Sbjct: 678 YSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLE 737

Query: 863 LVSYHSEKIAVAFVLTRN-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFH 921
            + YHSE++A+AF L    +  PIRIMKNL  C DCH+  K ISKIV R+I++RDS RFH
Sbjct: 738 SLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFH 797

Query: 922 HFNDGKCSCGDYW 934
           HF DG CSCGDYW
Sbjct: 798 HFKDGVCSCGDYW 810



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 148/562 (26%), Positives = 269/562 (47%), Gaps = 67/562 (11%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           ++F  N +++ Y   GDL +A  LF   P RN+ +W  ++  +   G +++A  +F+ M+
Sbjct: 73  NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132

Query: 79  RAGFLLNRYALGSVLR----ACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
             G + +R  + +VL           P   KFG+  H  V   N   D    + L+A   
Sbjct: 133 GEGVIPDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTHVFV--CNTLLDAYCKHGLLA--- 187

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
                   ARR+F E+  +D +++N+++   S+ G      +LF+ M+R G    +    
Sbjct: 188 -------AARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAG----IPATH 236

Query: 195 YTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
           +TF S++T A  + ++   L  Q+ A+V ++  + +++V ++L+  +++       R++F
Sbjct: 237 FTFSSILTVA--AGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLF 294

Query: 255 EQMIQKNVVSMN-----------------------------------------GLMEGRR 273
           ++M +++ VS N                                         G +    
Sbjct: 295 DEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVH 354

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
            GK++H  L+  GL     +GN L++MY+KCG +D ++S F     K ++SW  +I+G  
Sbjct: 355 IGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYV 414

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           QNG +EEA+  F  MRR GL     +  S + + +SL  I LG+Q+H   ++ G  S V 
Sbjct: 415 QNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVF 474

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD-SEALVSEAVKYYLDMRR 452
             + L+ +YA  G L   L+ F  MPE + +SWN+VI A+A   EA    A+K +  M  
Sbjct: 475 SGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEA--KNAIKMFEGMLH 532

Query: 453 AGWSPNGVTFINILAAASSFSMG-KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
            G++P+ VTF+++LAA S   +  +     H    +Y+++        ++   G+ G   
Sbjct: 533 CGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFS 592

Query: 512 DCEKIFARMSERRDEVSWNSMI 533
             +K+   M  + D + W S++
Sbjct: 593 QVQKMLVEMPFKADPIIWTSIL 614



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 164/648 (25%), Positives = 281/648 (43%), Gaps = 85/648 (13%)

Query: 76  EMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS------NVL 129
            MV+ GF +  Y L   LR+    G         +H    ++   FD +        N++
Sbjct: 33  RMVKTGFDVLTYRLNLGLRSLLSSG--------HLH----RARAMFDQMPHKNIFSLNLI 80

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           ++ Y S  +    A+ +F     R+  +W  ++  ++  G T     LF  M  EG    
Sbjct: 81  LSAYSSSGD-LPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEG---- 135

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
           + P+  T  +++     +V S       +     K GL + ++V + L+  + + G    
Sbjct: 136 VIPDRVTVTTVLNLPGCTVPS-------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAA 188

Query: 250 ARKIFEQMIQKNVVSMNGLMEG-----------------RRKG----------------- 275
           AR++F +M  K+ V+ N +M G                 RR G                 
Sbjct: 189 ARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAG 248

Query: 276 -------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
                   +VH  ++RS     V V N L++ Y+KC  +DD R +F  M  +D+VS+N +
Sbjct: 249 MAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVI 308

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           I+    N C    +  F  M++ G         + LS   SL  + +G+QIH + + LGL
Sbjct: 309 IAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGL 368

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
            S+  + NAL+ +Y+  G L      F    E   +SW ++I  +  +     EA++ + 
Sbjct: 369 ASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQN-GQHEEALQLFS 427

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
           DMRRAG  P+  TF +I+ A+SS +M  LG Q+H+ +I+    +     + L+  Y KCG
Sbjct: 428 DMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCG 487

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
            +D+  + F  M E R+ +SWN++IS Y H      A+ +   M+  G   D  TF +VL
Sbjct: 488 CLDEALRTFDEMPE-RNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVL 546

Query: 569 SACASVATLERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +AC+     +  M+      H   +    E    +    +D   + G      +    MP
Sbjct: 547 AACSHNGLADECMKYFHLMKHQYSISPWKEHYACV----IDTLGRVGCFSQVQKMLVEMP 602

Query: 624 VR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
            + +   W S++  ++   HG++ L   +  KL G  P   T   +LS
Sbjct: 603 FKADPIIWTSIL--HSCRIHGNQELARVAADKLFGMEPTDATPYVILS 648



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 201/406 (49%), Gaps = 50/406 (12%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K G    VF+CNTL++ Y + G LA+A ++F EM D+++V++  ++ G + +G+
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 216

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             +A ++F  M RAG     +   S+L      G +    G QVH LVL+S    +  V+
Sbjct: 217 HTQALQLFAAMRRAGIPATHFTFSSILTVA--AGMAHLLLGHQVHALVLRSTSVLNVFVN 274

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+  Y  C +  D  RR+F+E+  RD +S+N II+ Y+      +V +LF  MQ+ GF
Sbjct: 275 NSLLDFYSKC-DCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGF 333

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              + P    + ++++ A S  L   ++ +QI A +   GL S+  +G+AL+  +++ G 
Sbjct: 334 DRQVLP----YATMLSVAGS--LPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGM 387

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG-----------------RRK--------------- 274
              A+  F    +K+ +S   L+ G                 RR                
Sbjct: 388 LDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKA 447

Query: 275 ---------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    G+++H YLIRSG    V  G+ LV+MYAKCG +D++   F  M  ++S+SW
Sbjct: 448 SSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISW 507

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           N +IS     G  + AI  F  M   G    + + +S L++C+  G
Sbjct: 508 NAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNG 553



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 150/320 (46%), Gaps = 16/320 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q++  G A +  L N LI++Y + G L +A   F    +++++SW  +++GY   
Sbjct: 357 KQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQN 416

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   EA ++F +M RAG   +R    S+++A       G   G Q+H  +++S       
Sbjct: 417 GQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG--LGRQLHSYLIRSGYKSSVF 474

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
             +VL+ MY  C    D A R F+E+  R+ ISWN++IS Y+  G+  +  K+F  M   
Sbjct: 475 SGSVLVDMYAKC-GCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHC 533

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA-LVSGFAR 243
           GF     P+  TF S++ A   + L+   +  +   ++K    +S      A ++    R
Sbjct: 534 GF----NPDSVTFLSVLAACSHNGLADECM--KYFHLMKHQYSISPWKEHYACVIDTLGR 587

Query: 244 LGNFYYARKIFEQMIQK--NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG----L 297
           +G F   +K+  +M  K   ++  + L   R  G +    +    LF M          L
Sbjct: 588 VGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVIL 647

Query: 298 VNMYAKCGTIDDSRSVFRFM 317
            N+YA+ G  +D+  V + M
Sbjct: 648 SNIYARAGQWEDAACVKKIM 667


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 260/645 (40%), Positives = 380/645 (58%), Gaps = 9/645 (1%)

Query: 295 NGLVNMYAKCG----TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           N L+NM  +C       + +R +F  +   +   WNTMI GL  N C+++AI  +  MR 
Sbjct: 46  NYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRS 105

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
           +G + +NF+    L +CA L  + LG +IH   +K G D DV V  +L+ LYA  GYL  
Sbjct: 106 EGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLED 165

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
             KVF  +P+ + VSW ++I  +        EA+  +  +     +P+  T + +L+A +
Sbjct: 166 AHKVFDDIPDKNVVSWTAIISGYIGVGKF-REAIDMFRRLLEMNLAPDSFTIVRVLSACT 224

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
                  G  +H  +++  +     +  +L+  Y KCG M+    +F  M E+ D VSW 
Sbjct: 225 QLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEK-DIVSWG 283

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           +MI GY  N L  +A++L   M +   + D +T   VLSACA +  LE G  V     R 
Sbjct: 284 AMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRN 343

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
              ++ V+G+AL+D+Y+KCG +  A   F  M  ++   WN++ISG A +G+   +  LF
Sbjct: 344 EFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLF 403

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
            Q++  G  PD  TF+G+L  C+HAGLVDEG ++F SM + + L P +E + CMVDLLGR
Sbjct: 404 GQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGR 463

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
           AG LD+  + I  MP+  N+++W  +LGA CR + R T+L   A   L E+EP N+ NYV
Sbjct: 464 AGLLDEAHQLIRNMPMEANAIVWGALLGA-CRIH-RDTQLAELALKQLIELEPWNSGNYV 521

Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
           LL+N+Y++  KW++ AK R +M E  ++K  GCSW+ +   VH F+ GD+ HP  + IY 
Sbjct: 522 LLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYA 581

Query: 831 KLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMK 889
           KL EL +KM+ AGYVP T F LFD+E E KE  +  HSEK+A+AF +++      IR++K
Sbjct: 582 KLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVK 641

Query: 890 NLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           NLRVCGDCH A K IS I GREI +RD+NRFH F +G CSC DYW
Sbjct: 642 NLRVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 686



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 176/368 (47%), Gaps = 4/368 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G ++H  +++ G    V V   LV +YAKCG ++D+  VF  +  K+ VSW  +ISG   
Sbjct: 131 GVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIG 190

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G + EAI  F  +    L   +F+++  LS+C  LG +  G+ IH   +++G+  +V V
Sbjct: 191 VGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFV 250

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             +L+ +YA  G + +   VF  MPE D VSW ++I  +A    L  EA+  +L M+R  
Sbjct: 251 GTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYA-LNGLPKEAIDLFLQMQREN 309

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             P+  T + +L+A +     +LG  V   V +        +  AL+  Y KCG M    
Sbjct: 310 VKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAW 369

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           ++F  M E +D V WN++ISG   N  +  +  L   + + G + D  TF  +L  C   
Sbjct: 370 EVFKGMKE-KDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHA 428

Query: 575 ATLERGMEVHACGVR-ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNS 632
             ++ G        R   L   +     +VD+  + G +D A +    MP+  N   W +
Sbjct: 429 GLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGA 488

Query: 633 MISGYARH 640
           ++     H
Sbjct: 489 LLGACRIH 496



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 206/465 (44%), Gaps = 56/465 (12%)

Query: 13  KHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACK 72
           + G  +D +L N ++       D      LF ++   N   W  ++ G       ++A +
Sbjct: 39  RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIE 98

Query: 73  MFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAM 132
            +  M   GFL N +    VL+AC        + G+++H LV+K     D  V   L+ +
Sbjct: 99  FYGLMRSEGFLPNNFTFPFVLKACARL--LDLQLGVKIHTLVVKGGFDCDVFVKTSLVCL 156

Query: 133 YGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKP 192
           Y  C    D A ++F++I  ++++SW +IIS Y   G       +F R+       +L P
Sbjct: 157 YAKCGYLED-AHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRL----LEMNLAP 211

Query: 193 NEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
           + +T   +++A      + SG ++ + I+ M    G++ +++VG++LV  +A+ GN   A
Sbjct: 212 DSFTIVRVLSACTQLGDLNSGEWIHKCIMEM----GMVRNVFVGTSLVDMYAKCGNMEKA 267

Query: 251 RKIFEQMIQKNVVSMNGLMEG-----------------RRK------------------- 274
           R +F+ M +K++VS   +++G                 +R+                   
Sbjct: 268 RSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARL 327

Query: 275 -----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
                G+ V G + R+       +G  L+++YAKCG++  +  VF+ M  KD V WN +I
Sbjct: 328 GALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAII 387

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGL 388
           SGL  NG  + +   F  + + G+     + I  L  C   G +  G++      +   L
Sbjct: 388 SGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSL 447

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
              +     ++ L   AG L    ++   MP E + + W +++GA
Sbjct: 448 TPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGA 492



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 176/349 (50%), Gaps = 28/349 (8%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K GF  DVF+  +L+ +Y + G L  A K+FD++PD+N VSW  I+SGY   G  
Sbjct: 135 HTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKF 194

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA  MF+ ++      + + +  VL AC + G      G  +H  +++     +  V  
Sbjct: 195 REAIDMFRRLLEMNLAPDSFTIVRVLSACTQLG--DLNSGEWIHKCIMEMGMVRNVFVGT 252

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY  C  + + AR +F+ +  +D++SW ++I  Y+  G       LF +MQRE   
Sbjct: 253 SLVDMYAKC-GNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRE--- 308

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
            ++KP+ YT   +++A   + L    L + +  +V +   L +  +G+AL+  +A+ G+ 
Sbjct: 309 -NVKPDCYTVVGVLSAC--ARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSM 365

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYL-IRSGLFDMV------AVGNGLVNM 300
             A ++F+ M +K+ V  N ++ G      ++GY+ I  GLF  V        GN  + +
Sbjct: 366 SRAWEVFKGMKEKDRVVWNAIISGL----AMNGYVKISFGLFGQVEKLGIKPDGNTFIGL 421

Query: 301 YAKC---GTIDDSR----SVFRFMIGKDSVS-WNTMISGLDQNGCYEEA 341
              C   G +D+ R    S++RF     S+  +  M+  L + G  +EA
Sbjct: 422 LCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEA 470


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 273/757 (36%), Positives = 426/757 (56%), Gaps = 47/757 (6%)

Query: 221 MVKKAGLLS-DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-------- 271
           +V++ G+   D +  + L++ +A+LG    AR++F+ M ++N+VS   L++G        
Sbjct: 73  VVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFE 132

Query: 272 ---------RRKGKEVHGYLIRSGLFDMVA------------------------VGNGLV 298
                    +R+G EV+ +++ + L  +VA                        VG+ L+
Sbjct: 133 EAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLI 192

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
           + Y+ CG +  +R VF  +I KD+V+W  M+S   +N   E+A+  F  MR  G   + F
Sbjct: 193 DAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPF 252

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
            L S L +   L   +LG+ IHG  +K   D++  V  ALL +YA  GY+     VF ++
Sbjct: 253 VLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEII 312

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
           P  D + W+ +I  +A S     +A + +L M R+   PN  +   +L A ++ +   LG
Sbjct: 313 PHDDVILWSFLISRYAQSYQ-NEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLG 371

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
            Q+H  VIK    +E  + NAL+  Y KC  M++  +IF  + +  +EVSWN++I GY  
Sbjct: 372 QQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDA-NEVSWNTIIVGYCQ 430

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
           +     A+++   M          TF++VL ACA+ A+++  +++H+   ++    D ++
Sbjct: 431 SGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIV 490

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            ++L+D Y+KCG I  A + F+ +   +V SWN++ISGYA HG    AL LF++M     
Sbjct: 491 CNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDT 550

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
            P+ VTFV +LS C   GLV++G   F SM+  + + P ++ ++C+V LLGRAG L+   
Sbjct: 551 KPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDAL 610

Query: 719 EFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYAS 778
           +FI  +P TP+ ++WR +L +C     +   LG+ +A  + E+EPQ+   YVLL+NMYA+
Sbjct: 611 KFIGDIPSTPSPMVWRALLSSCVVH--KNVALGKFSAEKVLEIEPQDETTYVLLSNMYAA 668

Query: 779 GGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQK 838
            G  + VA  RK+M+   VKKE G SWV +K  VH F  G   HP+  +I   L+ LN K
Sbjct: 669 AGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLK 728

Query: 839 MRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDC 897
               GYVP     L D++ E K  ++  HSE++A+A+ L+      PIRIMKNLR C DC
Sbjct: 729 ASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDC 788

Query: 898 HSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           H+ FK ISKIV REIV+RD NRFHHF++G CSCGDYW
Sbjct: 789 HTVFKVISKIVQREIVVRDINRFHHFDEGICSCGDYW 825



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 177/654 (27%), Positives = 317/654 (48%), Gaps = 59/654 (9%)

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN--QTFDGLVSNVLIAMYGSCLESTD 141
           L+ YA   +L+ C   G +  + G  VH  V++       D   +NVL+ +Y   L    
Sbjct: 45  LDSYACARLLQRCIARGDA--RAGRAVHARVVQRGGVAQLDTFCANVLLNLYAK-LGPLA 101

Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
            ARR+F+ +  R+++S+ +++  Y+ RG       LF R+QREG       N +   +++
Sbjct: 102 AARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEV----NHFVLTTIL 157

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
               +    G  L   I A   K G   + +VGS+L+  ++  G   +AR +F+ +I K+
Sbjct: 158 KVLVAMDAPG--LTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKD 215

Query: 262 VVSMNGL---------------------MEGRRK--------------------GKEVHG 280
            V+   +                     M G +                     GK +HG
Sbjct: 216 AVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHG 275

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
             +++       VG  L++MYAKCG I+D+R+VF  +   D + W+ +IS   Q+   E+
Sbjct: 276 CAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQ 335

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A   F  M R  ++ + FSL   L +CA++ ++ LGQQIH   +KLG +S++ V NAL+ 
Sbjct: 336 AFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMD 395

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +YA    +   L++F  + + ++VSWN++I  +  S     +A+  + +MR A      V
Sbjct: 396 VYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQS-GFAEDALSVFQEMRAAHVLSTQV 454

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           TF ++L A ++ +  K   Q+H+ + K    N+T + N+L+  Y KCG + D  K+F  +
Sbjct: 455 TFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESI 514

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
            +  D VSWN++ISGY  +     A+ L   M +   + +  TF  +LS C S   + +G
Sbjct: 515 IQ-CDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQG 573

Query: 581 MEV-HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF-DLMPVRNVYSWNSMISGYA 638
           + + ++  +   ++  +   + +V +  + GR++ A +F  D+    +   W +++S   
Sbjct: 574 LSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCV 633

Query: 639 RHGHGDKALTLFSQMKLDGPLP-DHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
              H + AL  FS  K+    P D  T+V + +  + AG++D+     KSM  +
Sbjct: 634 V--HKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNI 685



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 153/581 (26%), Positives = 277/581 (47%), Gaps = 54/581 (9%)

Query: 1   SKDAKLFHLQILKHG--FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIV 58
           ++  +  H ++++ G     D F  N L+N+Y ++G LA+A +LFD MP+RN VS+  +V
Sbjct: 63  ARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLV 122

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
            GY  +G   EA  +F+ + R G  +N + L ++L+        G      +H    K  
Sbjct: 123 QGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCC--IHACACKLG 180

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              +  V + LI  Y  C  +   AR +F+ I  +D ++W +++S YS+          F
Sbjct: 181 HDRNAFVGSSLIDAYSLC-GAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTF 239

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           S+M+  G     KPN +   S++ AA    LS + L + I     K    ++ +VG AL+
Sbjct: 240 SKMRMAG----AKPNPFVLTSVLKAAV--CLSSAVLGKGIHGCAVKTLCDTEPHVGGALL 293

Query: 239 SGFARLGNFYYARKIFE-------------------------------QMIQKNVV---- 263
             +A+ G    AR +FE                               +M++ +VV    
Sbjct: 294 DMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEF 353

Query: 264 SMNGLMEGRRK------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
           S++G+++          G+++H  +I+ G    + VGN L+++YAKC  +++S  +FR +
Sbjct: 354 SLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSL 413

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
              + VSWNT+I G  Q+G  E+A+  F  MR   ++S+  +  S L +CA+   I    
Sbjct: 414 RDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTV 473

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           QIH    K   ++D  V N+L+  YA  G +   LKVF  + + D VSWN++I  +A   
Sbjct: 474 QIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYA-LH 532

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV-HAQVIKYNVANETTI 496
              ++A++ +  M ++   PN VTF+ +L+   S  +   G  + ++  + + +      
Sbjct: 533 GRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDH 592

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI 537
              ++   G+ G ++D  K    +      + W +++S  +
Sbjct: 593 YTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCV 633



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 108/264 (40%), Gaps = 40/264 (15%)

Query: 558 RLDHFTFATVLSACASVATLERGMEVHACGVR--ACLEFDVVIGSALVDMYSKCGRIDYA 615
           +LD +  A +L  C +      G  VHA  V+     + D    + L+++Y+K G +  A
Sbjct: 44  KLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAA 103

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV------- 668
            R FD MP RN+ S+ +++ GYA  G  ++A  LF +++ +G   +H     +       
Sbjct: 104 RRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAM 163

Query: 669 ----LSACSHAGLVDEGFKHF----KSMSQVYGLIPQLEQFSCMVD------------LL 708
               L+ C HA     G         S+   Y L   +    C+ D            ++
Sbjct: 164 DAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMV 223

Query: 709 GRAGELDKIEEFIN---KMPIT---PNSLIWRTVLGA--CCRANCRKTELGRKAANMLFE 760
               E D  E+ +N   KM +    PN  +  +VL A  C  +      +   A   L +
Sbjct: 224 SCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCD 283

Query: 761 MEPQNAVNYVLLANMYASGGKWED 784
            EP   V   LL +MYA  G  ED
Sbjct: 284 TEPH--VGGALL-DMYAKCGYIED 304


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 283/873 (32%), Positives = 479/873 (54%), Gaps = 59/873 (6%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G Q+H  +LKS+      ++  L+ MY  C    D A ++F+E+  R + +WN+++  + 
Sbjct: 65  GQQLHARLLKSH--LSAFLATKLLHMYEKCGSLKD-AVKVFDEMTERTIFTWNAMMGAFV 121

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
             G  +   +L+  M+  G    +  +  TF S++ A     L  S L  +I  +  K G
Sbjct: 122 SSGKYLEAIELYKEMRVLG----VAIDACTFPSVLKAC--GALGESRLGAEIHGVAVKCG 175

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFE--QMIQKNVVSMNGLM-----EGR------- 272
               ++V +AL++ + + G+   AR +F+   M +++ VS N ++     EG+       
Sbjct: 176 FGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSL 235

Query: 273 -RKGKEV----------------------------HGYLIRSGLFDMVAVGNGLVNMYAK 303
            R+ +EV                            HG  ++S  F  V V N L+ MYAK
Sbjct: 236 FRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAK 295

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           CG ++D+  VF  M+ +D VSWNT++SGL QN  Y +A+  F  M+         S+++ 
Sbjct: 296 CGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNL 355

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           +++    G ++ G+++H   ++ GLDS++ + N L+ +YA    +      F  M E D 
Sbjct: 356 IAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDL 415

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           +SW ++I  +A +E  + EA+  +  ++  G   + +   ++L A S         ++H 
Sbjct: 416 ISWTTIIAGYAQNECHL-EAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHG 474

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
            V K ++A +  ++NA+++ YG+ G  D   + F  +   +D VSW SMI+  +HN L  
Sbjct: 475 YVFKRDLA-DIMLQNAIVNVYGEVGHRDYARRAFESI-RSKDIVSWTSMITCCVHNGLPV 532

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +A+ L + + Q   + D     + LSA A++++L++G E+H   +R     +  I S+LV
Sbjct: 533 EALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLV 592

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           DMY+ CG ++ + + F  +  R++  W SMI+    HG G++A+ LF +M  +  +PDH+
Sbjct: 593 DMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHI 652

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TF+ +L ACSH+GL+ EG + F+ M   Y L P  E ++CMVDLL R+  L++  +F+  
Sbjct: 653 TFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRS 712

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           MPI P+S +W  +LGAC   + +  ELG  AA  L + + +N+  Y L++N++A+ G+W 
Sbjct: 713 MPIKPSSEVWCALLGACHIHSNK--ELGELAAKELLQSDTKNSGKYALISNIFAADGRWN 770

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM-RDA 842
           DV + R  MK   +KK  GCSW+ + + +H F+A D+SHP+ D IY KL +  + + +  
Sbjct: 771 DVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLGKKG 830

Query: 843 GYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAF 901
           GY+ QTKF   ++  E K  ++  HSE++A+ + L    K   IRI KNLR+C DCH+ F
Sbjct: 831 GYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGLLVTPKGTSIRITKNLRICDDCHTFF 890

Query: 902 KFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           K  S++  R +V+RD+NRFHHF  G CSCGD+W
Sbjct: 891 KIASEVSQRALVVRDANRFHHFERGLCSCGDFW 923



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 199/690 (28%), Positives = 327/690 (47%), Gaps = 69/690 (10%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H ++LK   +   FL   L+++Y + G L  A K+FDEM +R   +W  ++  +   G 
Sbjct: 68  LHARLLKSHLS--AFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGK 125

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA +++KEM   G  ++     SVL+AC   G S  + G ++H + +K        V 
Sbjct: 126 YLEAIELYKEMRVLGVAIDACTFPSVLKACGALGES--RLGAEIHGVAVKCGFGEFVFVC 183

Query: 127 NVLIAMYGSCLESTDCARRIFEEI--ETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           N LIAMYG C +    AR +F+ I  E  D +SWNSIIS +   G  +    LF RMQ  
Sbjct: 184 NALIAMYGKCGD-LGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEV 242

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSY--LLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           G    +  N YTF     AA   V   S+  L   I     K+   +D+YV +AL++ +A
Sbjct: 243 G----VASNTYTF----VAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYA 294

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---------------------------- 274
           + G    A ++F  M+ ++ VS N L+ G  +                            
Sbjct: 295 KCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLN 354

Query: 275 -------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                        GKEVH Y IR+GL   + +GN L++MYAKC  +      F  M  KD
Sbjct: 355 LIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKD 414

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            +SW T+I+G  QN C+ EAI  F  ++  G+      + S L +C+ L      ++IHG
Sbjct: 415 LISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHG 474

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
              K  L +D+ + NA++++Y + G+     + F  +   D VSW S+I     +  L  
Sbjct: 475 YVFKRDL-ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHN-GLPV 532

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           EA++ +  +++    P+ +  I+ L+A ++ S  K G ++H  +I+     E  I ++L+
Sbjct: 533 EALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLV 592

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
             Y  CG +++  K+F  + ++RD + W SMI+    +    +A+ L   M       DH
Sbjct: 593 DMYACCGTVENSRKMFHSV-KQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDH 651

Query: 562 FTFATVLSACASVATLERG---MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
            TF  +L AC+    +  G    E+   G +  LE      + +VD+ S+   ++ A +F
Sbjct: 652 ITFLALLYACSHSGLMVEGKRFFEIMKYGYQ--LEPWPEHYACMVDLLSRSNSLEEAYQF 709

Query: 619 FDLMPVR-NVYSWNSMISGYARHGHGDKAL 647
              MP++ +   W +++   A H H +K L
Sbjct: 710 VRSMPIKPSSEVWCALLG--ACHIHSNKEL 737



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 134/263 (50%), Gaps = 14/263 (5%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H   +++G   ++ + NTLI++Y +   +      F+ M +++ +SW  I++GY 
Sbjct: 367 NGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYA 426

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                 EA  +F+++   G  ++   +GSVLRAC   G     F  ++H  V K +   D
Sbjct: 427 QNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACS--GLKSRNFIREIHGYVFKRDLA-D 483

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            ++ N ++ +YG  +   D ARR FE I ++D++SW S+I+     G  +   +LF  ++
Sbjct: 484 IMLQNAIVNVYGE-VGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLK 542

Query: 183 REGFRYSLKPNEYTFGSLI--TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           +     +++P+     S +  TA  SS+  G    ++I   + + G   +  + S+LV  
Sbjct: 543 QT----NIQPDSIAIISALSATANLSSLKKG----KEIHGFLIRKGFFLEGPIASSLVDM 594

Query: 241 FARLGNFYYARKIFEQMIQKNVV 263
           +A  G    +RK+F  + Q++++
Sbjct: 595 YACCGTVENSRKMFHSVKQRDLI 617



 Score = 47.0 bits (110), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 23/99 (23%), Positives = 49/99 (49%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  +++ GF  +  + ++L+++Y   G + ++ K+F  +  R+ + W  +++  
Sbjct: 567 KKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINAN 626

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G  NEA  +FK+M     + +     ++L AC   G
Sbjct: 627 GMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSG 665


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 277/752 (36%), Positives = 417/752 (55%), Gaps = 43/752 (5%)

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------- 271
           + K G   DL+  + L++ + + G    A  +F++M ++N VS   L +G          
Sbjct: 75  ILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYACQDPVGLY 134

Query: 272 ---RRKGKEV------------------------HGYLIRSGLFDMVAVGNGLVNMYAKC 304
               R+G E+                        H  +++ G      VG  L+N Y+ C
Sbjct: 135 SRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVC 194

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G++D +RSVF  ++ KD V W  ++S   +NGC+E+++     M  DG M +N++  + L
Sbjct: 195 GSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTAL 254

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +   LG     + +HG+ LK   + D  V   LL LY   G +S   KVF  MP++D V
Sbjct: 255 KASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVV 314

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
            W+ +I  F  +    ++AV  ++ MR     PN  T  +IL   +      LG Q+H  
Sbjct: 315 PWSFMIARFCQN-GFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL 373

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
           V+K     +  + NAL+  Y KC +MD   K+FA +S + + VSWN++I GY +     K
Sbjct: 374 VVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSK-NVVSWNTVIVGYENLGEGGK 432

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
           A+N+    ++    +   TF++ L ACAS+A++E G++VH   ++      V + ++L+D
Sbjct: 433 ALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLID 492

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
           MY+KCG I  A   F+ M   +V SWN++ISGY+ HG G +AL +F  MK     P+ +T
Sbjct: 493 MYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLT 552

Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           F+GVLS CS+AGL+D+G   F+SM   +G+ P LE ++CMV L GR+G+LDK    I  +
Sbjct: 553 FLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGI 612

Query: 725 PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
           P  P+ +IWR +L A    N    E  R++A  + ++ P++   YVLL+NMYA   +W +
Sbjct: 613 PYEPSVMIWRAMLSA--SMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQWAN 670

Query: 785 VAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGY 844
           VA  RK+MKE  VKKE G SW+  +  VH F  G   HP+  LI   L+ LN K   AGY
Sbjct: 671 VASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLNMKATRAGY 730

Query: 845 VPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR--NSKLPIRIMKNLRVCGDCHSAFK 902
           VP     L D++ E K+  +  HSE++A+A+ L R  +S+  I IMKNLR+C DCHSA K
Sbjct: 731 VPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMK 790

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            IS IV R++V+RD NRFHHF+ G CSC D+W
Sbjct: 791 VISSIVQRDLVIRDMNRFHHFHAGVCSCDDHW 822



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 160/579 (27%), Positives = 268/579 (46%), Gaps = 60/579 (10%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S  AK  H  ILK G   D+F  N L+N YV+ G    A  LFDEMP+RN+VS+  +  G
Sbjct: 65  SVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQG 124

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y       +   ++  + R G  LN +   S L+       +  +    +H  ++K    
Sbjct: 125 YA----CQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKA--EICWWLHSPIVKLGYD 178

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            +  V   LI  Y  C  S D AR +FE I  +D++ W  I+S Y + G      +L SR
Sbjct: 179 SNAFVGAALINAYSVC-GSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSR 237

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M  +GF     PN YTF + + A+    L   +  + +   + K     D  VG  L+  
Sbjct: 238 MGMDGFM----PNNYTFDTALKASIG--LGAFHFAKSVHGQILKTCYELDPRVGVGLLQL 291

Query: 241 FARLGNFYYARKIFEQMIQKNVVS------------------------------------ 264
           + +LG+   A K+F +M + +VV                                     
Sbjct: 292 YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTL 351

Query: 265 ---MNGLMEGRRKG--KEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
              +NG   G+  G  +++HG +++ G FD+ V V N L+++YAKC  +D +  +F  + 
Sbjct: 352 SSILNGCAIGKCSGLGEQLHGLVVKVG-FDLDVYVSNALIDVYAKCEKMDTAVKLFAELS 410

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            K+ VSWNT+I G +  G   +A+  F    R+ +  +  +  S L +CASL  + LG Q
Sbjct: 411 SKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQ 470

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           +HG  +K      V+VSN+L+ +YA  G +     VF  M   D  SWN++I  ++ +  
Sbjct: 471 VHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYS-THG 529

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
           L  +A++ +  M+ +   PNG+TF+ +L+  S+  +   G      +I  +   E  +E+
Sbjct: 530 LGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMI-CDHGIEPCLEH 588

Query: 499 --ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
              ++  +G+ G++D    +   +      + W +M+S 
Sbjct: 589 YTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSA 627



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 114/246 (46%), Gaps = 8/246 (3%)

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +H  ++K     +    N LL+ Y K G   D   +F  M ER + VS+ ++  GY   +
Sbjct: 71  IHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPER-NNVSYVTLTQGYACQD 129

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
                + L   + + G  L+   F + L    S+   E    +H+  V+   + +  +G+
Sbjct: 130 ----PVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGA 185

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           AL++ YS CG +D A   F+ +  +++  W  ++S Y  +G  + +L L S+M +DG +P
Sbjct: 186 ALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMP 245

Query: 661 DHVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           ++ TF   L A    G        H + +   Y L P++     ++ L  + G++    +
Sbjct: 246 NNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVG--VGLLQLYTQLGDMSDAFK 303

Query: 720 FINKMP 725
             N+MP
Sbjct: 304 VFNEMP 309


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 267/674 (39%), Positives = 407/674 (60%), Gaps = 16/674 (2%)

Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVGNG-LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
           +G     ++H   +R GL    A  +G LV+ Y + G + D+   F  M  +D  +WN M
Sbjct: 82  QGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAM 141

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           +SGL +N    EA+  F  M  +G+     ++ S L  C  LG   L   +H   +K GL
Sbjct: 142 LSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGL 201

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           D ++ V NA++ +Y   G L    KVF  M   D V+WNS+I    +    V+ AV+ + 
Sbjct: 202 DDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGH-EQGGQVASAVEMFC 260

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTIENALLSCYGK 506
            MR +G SP+ +T +++ +A +       G  VH  +++  ++V  +    NA++  Y K
Sbjct: 261 GMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVG-DIIAGNAIVDMYAK 319

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF--TF 564
             +++  +++F  M  R D VSWN++I+GY+ N L  +A++ V+  MQ+ + L     TF
Sbjct: 320 LSKIEAAQRMFDSMPVR-DAVSWNTLITGYMQNGLASEAIH-VYDHMQKHEGLKPIQGTF 377

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
            +VL A + +  L++G  +HA  ++  L  DV +G+ ++D+Y+KCG++D A   F+  P 
Sbjct: 378 VSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPR 437

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           R+   WN++ISG   HGHG KAL+LFSQM+ +G  PDHVTFV +L+ACSHAGLVD+G   
Sbjct: 438 RSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNF 497

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRA 743
           F  M   YG+ P  + ++CMVD+ GRAG+LD   +FI  MPI P+S IW  +LGAC    
Sbjct: 498 FNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHG 557

Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
           N    E+G+ A+  LFE++P+N   YVL++NMYA  GKW+ V + R  ++   ++K  G 
Sbjct: 558 N---VEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGW 614

Query: 804 SWVTMKDGVHVFVAGDES--HPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKE 861
           S + +K  V+VF +G++   HP+ + I  +L +L  K+R  GYVP   F L D+E + KE
Sbjct: 615 SSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVLQDVEEDEKE 674

Query: 862 DLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRF 920
            +++ HSE++A+AF ++    + P+ I KNLRVCGDCH+A K+ISKI  REI++RDSNRF
Sbjct: 675 QILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYISKITEREIIVRDSNRF 734

Query: 921 HHFNDGKCSCGDYW 934
           HHF DG CSCGD+W
Sbjct: 735 HHFKDGYCSCGDFW 748



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 147/549 (26%), Positives = 256/549 (46%), Gaps = 62/549 (11%)

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           RR+   +    L++ N++IS +S+         L   +        L+P+ +TF  L+ A
Sbjct: 22  RRLDPHVHAPLLLA-NTLISAFSRASLPRLALPLLRHLLLSSPLLPLRPDAFTFPPLLRA 80

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLL-SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
           A      G     Q+ A   + GLL  D +   ALV  + R G    A + F++M  ++V
Sbjct: 81  A-----QGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDV 135

Query: 263 VSMNGLMEG-----------------------------------------RRKGKEVHGY 281
            + N ++ G                                         R     +H Y
Sbjct: 136 PAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLY 195

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
            ++ GL D + V N ++++Y K G +++ R VF  M  +D V+WN++ISG +Q G    A
Sbjct: 196 AVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASA 255

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD-SDVSVSNALLS 400
           +  FC MR  G+     +L+S  S+ A  G I  G+ +H   ++ G D  D+   NA++ 
Sbjct: 256 VEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVD 315

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR-AGWSPNG 459
           +YA    +    ++F  MP  D VSWN++I  +  +  L SEA+  Y  M++  G  P  
Sbjct: 316 MYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQN-GLASEAIHVYDHMQKHEGLKPIQ 374

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
            TF+++L A S     + G ++HA  IK  +  +  +   ++  Y KCG++D+   +F +
Sbjct: 375 GTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQ 434

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
            + RR    WN++ISG   +    KA++L   M Q G   DH TF ++L+AC+    +++
Sbjct: 435 -TPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQ 493

Query: 580 G-----MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSM 633
           G     M   A G++   +      + +VDM+ + G++D A  F   MP++ +   W ++
Sbjct: 494 GRNFFNMMQTAYGIKPIAKHY----ACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGAL 549

Query: 634 ISGYARHGH 642
           +     HG+
Sbjct: 550 LGACRIHGN 558



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 205/459 (44%), Gaps = 54/459 (11%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D F    L++ Y+R G +  A + FDEM  R+  +W  ++SG      + EA  +F  MV
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMV 162

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             G   +   + SVL  C   G       M  H   +K     +  V N +I +YG  L 
Sbjct: 163 MEGVAGDAVTVSSVLPMCVLLGDRALALAM--HLYAVKHGLDDELFVCNAMIDVYGK-LG 219

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             +  R++F+ + +RDL++WNSIIS + Q G   S  ++F  M+  G    + P+  T  
Sbjct: 220 MLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSG----VSPDVLTLL 275

Query: 199 SLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
           SL +A A    + G   +     MV++   + D+  G+A+V  +A+L     A+++F+ M
Sbjct: 276 SLASAIAQCGDICGGRSVH--CYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSM 333

Query: 258 IQKNVVSMNGLMEGR------------------------------------------RKG 275
             ++ VS N L+ G                                           ++G
Sbjct: 334 PVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQG 393

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
             +H   I++GL   V VG  ++++YAKCG +D++  +F     + +  WN +ISG+  +
Sbjct: 394 TRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVH 453

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG-EGLKLGLDSDVSV 394
           G   +A+  F  M+++G+   + + +S L++C+  G +  G+          G+      
Sbjct: 454 GHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKH 513

Query: 395 SNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
              ++ ++  AG L         MP + D   W +++GA
Sbjct: 514 YACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGA 552



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 178/384 (46%), Gaps = 60/384 (15%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A   HL  +KHG   ++F+CN +I+VY ++G L    K+FD M  R+ V+W  I+SG+  
Sbjct: 189 ALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQ 248

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHC-LVLKSNQTFD 122
            G    A +MF  M  +G   +   L S+  A  +CG      G  VHC +V +     D
Sbjct: 249 GGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCG--DICGGRSVHCYMVRRGWDVGD 306

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            +  N ++ MY   L   + A+R+F+ +  RD +SWN++I+ Y Q G       ++  MQ
Sbjct: 307 IIAGNAIVDMYAK-LSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQ 365

Query: 183 R-EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVGSALV 238
           + EG    LKP + TF S++  AYS + +    LQQ   + A+  K GL  D+YVG+ ++
Sbjct: 366 KHEG----LKPIQGTFVSVLP-AYSHLGA----LQQGTRMHALSIKTGLNLDVYVGTCVI 416

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRKGKEV--- 278
             +A+ G    A  +FEQ  +++    N ++ G                 +++G      
Sbjct: 417 DLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHV 476

Query: 279 ----------HGYLIRSG--LFDMVAVGNG----------LVNMYAKCGTIDDSRSVFRF 316
                     H  L+  G   F+M+    G          +V+M+ + G +DD+    R 
Sbjct: 477 TFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRN 536

Query: 317 M-IGKDSVSWNTMISGLDQNGCYE 339
           M I  DS  W  ++     +G  E
Sbjct: 537 MPIKPDSAIWGALLGACRIHGNVE 560


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 281/793 (35%), Positives = 447/793 (56%), Gaps = 45/793 (5%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           AR +F+++  +++ S N I+S YS  GD  +   LF          S      T  +++ 
Sbjct: 62  ARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF---------LSSPHRNATTWTIMM 112

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
            A+++    S  L    AM+ + G++ D                         ++    V
Sbjct: 113 RAHAAAGRTSDALSLFRAMLGE-GVIPD-------------------------RVTVTTV 146

Query: 263 VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
           +++ G          +H + I+ GL   V V N L++ Y K G +  +R VF  M  KD+
Sbjct: 147 LNLPGCTV-----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDA 201

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           V++N M+ G  + G + +A+  F AMRR G+ +++F+  S L+  A +  ++LG Q+H  
Sbjct: 202 VTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHAL 261

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            L+     +V V+N+LL  Y+    L    ++F  MPE D VS+N +I A+A ++   + 
Sbjct: 262 VLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQC-AAT 320

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
            ++ + +M++ G+    + +  +L+ A S     +G Q+HAQ++   +A+E  + NAL+ 
Sbjct: 321 VLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALID 380

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            Y KCG +D  +  F+  SE+   +SW ++I+GY+ N    +A+ L   M + G R D  
Sbjct: 381 MYSKCGMLDAAKSNFSNRSEK-SAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRA 439

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           TF++++ A +S+A +  G ++H+  +R+  +  V  GS LVDMY+KCG +D A R FD M
Sbjct: 440 TFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEM 499

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
           P RN  SWN++IS YA +G    A+ +F  M   G  PD VTF+ VL+ACSH GL DE  
Sbjct: 500 PERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECM 559

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
           K+F  M   Y + P  E ++C++D LGR G   ++++ + +MP   + +IW ++L + CR
Sbjct: 560 KYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHS-CR 618

Query: 743 ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
            +  + EL R AA+ LF MEP +A  YV+L+N+YA  G+WED A  +K M++  V+KE+G
Sbjct: 619 IHGNQ-ELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESG 677

Query: 803 CSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKED 862
            SWV +K  ++ F + D + P  D I ++L  L ++M   GY P    AL  ++ E K +
Sbjct: 678 YSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLE 737

Query: 863 LVSYHSEKIAVAFVLTRN-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFH 921
            + YHSE++A+AF L    +  PIRIMKNL  C DCH+  K ISKIV R+I++RDS RFH
Sbjct: 738 SLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFH 797

Query: 922 HFNDGKCSCGDYW 934
           HF DG CSCGDYW
Sbjct: 798 HFKDGVCSCGDYW 810



 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 148/562 (26%), Positives = 269/562 (47%), Gaps = 67/562 (11%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           ++F  N +++ Y   GDL +A  LF   P RN+ +W  ++  +   G +++A  +F+ M+
Sbjct: 73  NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132

Query: 79  RAGFLLNRYALGSVLR----ACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
             G + +R  + +VL           P   KFG+  H  V   N   D    + L+A   
Sbjct: 133 GEGVIPDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTHVFV--CNTLLDAYCKHGLLA--- 187

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
                   ARR+F E+  +D +++N+++   S+ G      +LF+ M+R G    +    
Sbjct: 188 -------AARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAG----IPATH 236

Query: 195 YTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
           +TF S++T A  + ++   L  Q+ A+V ++  + +++V ++L+  +++       R++F
Sbjct: 237 FTFSSILTVA--AGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLF 294

Query: 255 EQMIQKNVVSMN-----------------------------------------GLMEGRR 273
           ++M +++ VS N                                         G +    
Sbjct: 295 DEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVH 354

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
            GK++H  L+  GL     +GN L++MY+KCG +D ++S F     K ++SW  +I+G  
Sbjct: 355 IGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYV 414

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           QNG +EEA+  F  MRR GL     +  S + + +SL  I LG+Q+H   ++ G  S V 
Sbjct: 415 QNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVF 474

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD-SEALVSEAVKYYLDMRR 452
             + L+ +YA  G L   L+ F  MPE + +SWN+VI A+A   EA    A+K +  M  
Sbjct: 475 SGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEA--KNAIKMFEGMLH 532

Query: 453 AGWSPNGVTFINILAAASSFSMG-KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
            G++P+ VTF+++LAA S   +  +     H    +Y+++        ++   G+ G   
Sbjct: 533 CGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFS 592

Query: 512 DCEKIFARMSERRDEVSWNSMI 533
             +K+   M  + D + W S++
Sbjct: 593 QVQKMLVEMPFKADPIIWTSIL 614



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 164/647 (25%), Positives = 281/647 (43%), Gaps = 85/647 (13%)

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS------NVLI 130
           MV+ GF +  Y L   LR+    G         +H    ++   FD +        N+++
Sbjct: 34  MVKTGFDVLTYRLNLGLRSLLSSG--------HLH----RARAMFDQMPHKNIFSLNLIL 81

Query: 131 AMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSL 190
           + Y S  +    A+ +F     R+  +W  ++  ++  G T     LF  M  EG    +
Sbjct: 82  SAYSSSGD-LPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEG----V 136

Query: 191 KPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
            P+  T  +++     +V S       +     K GL + ++V + L+  + + G    A
Sbjct: 137 IPDRVTVTTVLNLPGCTVPS-------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAA 189

Query: 251 RKIFEQMIQKNVVSMNGLMEG-----------------RRKG------------------ 275
           R++F +M  K+ V+ N +M G                 RR G                  
Sbjct: 190 RRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGM 249

Query: 276 ------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
                  +VH  ++RS     V V N L++ Y+KC  +DD R +F  M  +D+VS+N +I
Sbjct: 250 AHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVII 309

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
           +    N C    +  F  M++ G         + LS   SL  + +G+QIH + + LGL 
Sbjct: 310 AAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLA 369

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           S+  + NAL+ +Y+  G L      F    E   +SW ++I  +  +     EA++ + D
Sbjct: 370 SEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQN-GQHEEALQLFSD 428

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           MRRAG  P+  TF +I+ A+SS +M  LG Q+H+ +I+    +     + L+  Y KCG 
Sbjct: 429 MRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGC 488

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           +D+  + F  M E R+ +SWN++IS Y H      A+ +   M+  G   D  TF +VL+
Sbjct: 489 LDEALRTFDEMPE-RNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLA 547

Query: 570 ACASVATLERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
           AC+     +  M+      H   +    E    +    +D   + G      +    MP 
Sbjct: 548 ACSHNGLADECMKYFHLMKHQYSISPWKEHYACV----IDTLGRVGCFSQVQKMLVEMPF 603

Query: 625 R-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
           + +   W S++  ++   HG++ L   +  KL G  P   T   +LS
Sbjct: 604 KADPIIWTSIL--HSCRIHGNQELARVAADKLFGMEPTDATPYVILS 648



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 201/406 (49%), Gaps = 50/406 (12%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K G    VF+CNTL++ Y + G LA+A ++F EM D+++V++  ++ G + +G+
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 216

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             +A ++F  M RAG     +   S+L      G +    G QVH LVL+S    +  V+
Sbjct: 217 HTQALQLFAAMRRAGIPATHFTFSSILTVA--AGMAHLLLGHQVHALVLRSTSVLNVFVN 274

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+  Y  C +  D  RR+F+E+  RD +S+N II+ Y+      +V +LF  MQ+ GF
Sbjct: 275 NSLLDFYSKC-DCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGF 333

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              + P    + ++++ A S  L   ++ +QI A +   GL S+  +G+AL+  +++ G 
Sbjct: 334 DRQVLP----YATMLSVAGS--LPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGM 387

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG-----------------RRK--------------- 274
              A+  F    +K+ +S   L+ G                 RR                
Sbjct: 388 LDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKA 447

Query: 275 ---------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    G+++H YLIRSG    V  G+ LV+MYAKCG +D++   F  M  ++S+SW
Sbjct: 448 SSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISW 507

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           N +IS     G  + AI  F  M   G    + + +S L++C+  G
Sbjct: 508 NAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNG 553



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 150/320 (46%), Gaps = 16/320 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q++  G A +  L N LI++Y + G L +A   F    +++++SW  +++GY   
Sbjct: 357 KQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQN 416

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   EA ++F +M RAG   +R    S+++A       G   G Q+H  +++S       
Sbjct: 417 GQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG--LGRQLHSYLIRSGYKSSVF 474

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
             +VL+ MY  C    D A R F+E+  R+ ISWN++IS Y+  G+  +  K+F  M   
Sbjct: 475 SGSVLVDMYAKC-GCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHC 533

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA-LVSGFAR 243
           GF     P+  TF S++ A   + L+   +  +   ++K    +S      A ++    R
Sbjct: 534 GF----NPDSVTFLSVLAACSHNGLADECM--KYFHLMKHQYSISPWKEHYACVIDTLGR 587

Query: 244 LGNFYYARKIFEQMIQK--NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG----L 297
           +G F   +K+  +M  K   ++  + L   R  G +    +    LF M          L
Sbjct: 588 VGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVIL 647

Query: 298 VNMYAKCGTIDDSRSVFRFM 317
            N+YA+ G  +D+  V + M
Sbjct: 648 SNIYARAGQWEDAACVKKIM 667


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 282/874 (32%), Positives = 480/874 (54%), Gaps = 58/874 (6%)

Query: 107 GMQVHCLVLKSNQTFDGL-VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY 165
           G Q+H   LK+    D + +    + MYG C    D A ++F+++  R + +WN++I   
Sbjct: 65  GQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYD-AVKVFDKMSERTIFTWNAMIGAC 123

Query: 166 SQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKA 225
              G  +   +L+  M+  G    +  + +TF  ++ A          L  +I  +  K 
Sbjct: 124 VSAGRYVEAIELYKEMRVLG----VSLDAFTFPCVLKAC--GAFKERRLGCEIHGVAVKC 177

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQ--MIQKNVVSMNGLM-----EGR------ 272
           G    ++V +AL++ +A+ G+   AR +F+   M + + VS N ++     EG       
Sbjct: 178 GYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALS 237

Query: 273 ------------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
                                         + G+ +H  +++S  F  V V N L+ MYA
Sbjct: 238 LFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYA 297

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIS 362
            CG ++D+  VF+ M+ KD VSWNT++SG+ QN  Y +AI +F  M+  G      S+++
Sbjct: 298 NCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLN 357

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
            +++      ++ G ++H   +K G+DS++ + N+L+ +Y     +      F  MPE D
Sbjct: 358 MIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKD 417

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
            +SW ++I  +A +E  + +A+     ++      + +   +IL A S     KL  ++H
Sbjct: 418 LISWTTIIAGYAQNECHL-DALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIH 476

Query: 483 AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
             V+K  +A +  I+NA+++ YG+   +D    +F  ++ + D VSW SMI+  +HN L 
Sbjct: 477 GYVLKGGLA-DILIQNAIVNVYGELALVDYARHVFESINSK-DIVSWTSMITCCVHNGLA 534

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
            +A+ L   +++     D  T  +VL A A++++L++G E+H   +R     + +I ++L
Sbjct: 535 IEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSL 594

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           VDMY++CG ++ A   F+ +  R++  W SMI+    HG G  A+ LFS+M  +  LPDH
Sbjct: 595 VDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDH 654

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFIN 722
           +TF+ +L ACSH+GLV EG +HF+ M   Y L P  E ++C+VDLL R+  L++   F+ 
Sbjct: 655 ITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVR 714

Query: 723 KMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKW 782
            MPI P++ +W  +LGA CR +    +LG  AA  L ++  +N+ NYVL++N +A+ G+W
Sbjct: 715 NMPIEPSAEVWCALLGA-CRIH-SNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRW 772

Query: 783 EDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD- 841
            DV + R  MK  ++KK+ GCSW+ +++ +H F+A D+SHP+ + IY KL +  + +++ 
Sbjct: 773 NDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEK 832

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSA 900
            GY  QTK    D+  E K  ++  HSE++A+ + L   SK   +RI KNLR+C DCH+ 
Sbjct: 833 GGYRAQTKLVFHDVCEEEKTQMLYGHSERLALGYGLLVTSKGTCLRITKNLRICDDCHAF 892

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           FK  S+I  R +V+RD++RFHHF  G CSCGD+W
Sbjct: 893 FKIASEISQRTLVVRDASRFHHFERGLCSCGDFW 926



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 188/687 (27%), Positives = 318/687 (46%), Gaps = 64/687 (9%)

Query: 7   FHLQILK-HGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
            H   LK   +   VFL    +++Y + G    A K+FD+M +R   +W  ++      G
Sbjct: 68  LHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAG 127

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFK---FGMQVHCLVLKSNQTFD 122
              EA +++KEM   G  L+ +    VL+AC       FK    G ++H + +K      
Sbjct: 128 RYVEAIELYKEMRVLGVSLDAFTFPCVLKAC-----GAFKERRLGCEIHGVAVKCGYGGF 182

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEE--IETRDLISWNSIISVYSQRGDTISVFKLFSR 180
             V N LIAMY  C +    AR +F+   +E  D +SWNSIIS +   G+++    LF R
Sbjct: 183 VFVCNALIAMYAKCGD-LGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRR 241

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           MQ  G    ++ N YTF S + A          + + I A++ K+   +D+YV +AL++ 
Sbjct: 242 MQEVG----VESNTYTFVSALQACEGPTFIK--IGRGIHAVILKSNHFTDVYVSNALIAM 295

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------- 274
           +A  G    A ++F+ M+ K+ VS N L+ G  +                          
Sbjct: 296 YANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSV 355

Query: 275 ---------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                          G EVH Y I+ G+   + +GN L++MY KC  +    S F +M  
Sbjct: 356 LNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPE 415

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           KD +SW T+I+G  QN C+ +A+     ++ + +      + S L +C+ L    L ++I
Sbjct: 416 KDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEI 475

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           HG  LK GL +D+ + NA++++Y +   +     VF  +   D VSW S+I     +  L
Sbjct: 476 HGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHN-GL 533

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
             EA++ +  +      P+ +T +++L AA++ S  K G ++H  +I+     E  I N+
Sbjct: 534 AIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANS 593

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  Y +CG M++   IF  + ++RD + W SMI+    +     A++L   M       
Sbjct: 594 LVDMYARCGTMENARNIFNYV-KQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLP 652

Query: 560 DHFTFATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
           DH TF  +L AC+    +  G +          LE      + LVD+ ++   ++ A  F
Sbjct: 653 DHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHF 712

Query: 619 FDLMPVR-NVYSWNSMISGYARHGHGD 644
              MP+  +   W +++     H + D
Sbjct: 713 VRNMPIEPSAEVWCALLGACRIHSNND 739



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 210/429 (48%), Gaps = 13/429 (3%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLG--LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           L  CAS   +  GQQ+H   LK    LDS V +    + +Y   G     +KVF  M E 
Sbjct: 53  LELCASHKALPQGQQLHAHFLKTQNYLDS-VFLDTKFVHMYGKCGSFYDAVKVFDKMSER 111

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
              +WN++IGA   +   V EA++ Y +MR  G S +  TF  +L A  +F   +LG ++
Sbjct: 112 TIFTWNAMIGACVSAGRYV-EAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEI 170

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF-ARMSERRDEVSWNSMISGYIHNE 540
           H   +K        + NAL++ Y KCG++     +F + + E+ D VSWNS+IS ++   
Sbjct: 171 HGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEG 230

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
              +A++L   M + G   + +TF + L AC     ++ G  +HA  +++    DV + +
Sbjct: 231 ESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSN 290

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           AL+ MY+ CG+++ A R F  M  ++  SWN+++SG  ++     A+  F  M+  G  P
Sbjct: 291 ALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKP 350

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           D V+ + +++A   +  +  G +   + +  +G+   +   + ++D+ G+   +  +   
Sbjct: 351 DQVSVLNMIAASGRSANLLAGME-VHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSA 409

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELG--RKAANMLFEMEPQNAVNYVLLANMYAS 778
              MP   + + W T++    +  C    L   RK      +++P   +  +LLA    S
Sbjct: 410 FEYMP-EKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPM-MIGSILLA---CS 464

Query: 779 GGKWEDVAK 787
           G K E + K
Sbjct: 465 GLKSEKLIK 473



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 8/205 (3%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  +LK G A D+ + N ++NVY  +  +  A  +F+ +  ++ VSW  +++   H 
Sbjct: 473 KEIHGYVLKGGLA-DILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHN 531

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G++ EA ++F  ++      +   L SVL A      S  K G ++H  +++     +GL
Sbjct: 532 GLAIEALELFNSLIETNIEPDLITLVSVLYAA--AALSSLKKGKEIHGFLIRKGFFLEGL 589

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           ++N L+ MY  C  + + AR IF  ++ RDLI W S+I+     G       LFS+M  E
Sbjct: 590 IANSLVDMYARC-GTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDE 648

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVL 209
               ++ P+  TF +L+ A   S L
Sbjct: 649 ----NVLPDHITFLALLYACSHSGL 669



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 1/110 (0%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFD-VVIGSALVDMYSKCGRIDYASRFFDLM 622
           ++  L  CAS   L +G ++HA  ++     D V + +  V MY KCG    A + FD M
Sbjct: 49  YSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKM 108

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
             R +++WN+MI      G   +A+ L+ +M++ G   D  TF  VL AC
Sbjct: 109 SERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKAC 158



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/99 (23%), Positives = 48/99 (48%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  +++ GF  +  + N+L+++Y R G + +A  +F+ +  R+ + W  +++  
Sbjct: 570 KKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINAN 629

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   +A  +F +M     L +     ++L AC   G
Sbjct: 630 GMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSG 668


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 285/801 (35%), Positives = 440/801 (54%), Gaps = 55/801 (6%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A ++F+++  ++ IS N +IS + + G      +LF  M                    T
Sbjct: 62  AHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVER-----------------T 104

Query: 203 AAYSSVLSGSYLLQ-------QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
           A   ++L G YL         ++ A +++ G+  D      L+SGF  L           
Sbjct: 105 AVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELET--------- 155

Query: 256 QMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
               KNV+             ++H ++I+ G    + V N LV+ Y K   +  +  +F+
Sbjct: 156 ----KNVIV------------QIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK 199

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M+ KD+V++N++++G    G  EEAI  F  +   G+  S+F+  + LS+   L     
Sbjct: 200 HMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKF 259

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           GQQ+HG  LK     +V V NALL  Y+    +    K+F  MPE D +S+N VI ++A 
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYA- 318

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
                 E+   +  ++   +      F  +L+ A+S    ++G Q+H Q I      E+ 
Sbjct: 319 WNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR 378

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           +ENAL+  Y KC    + +KIF  ++  +  V W +MIS Y+      + +N+   M + 
Sbjct: 379 VENALVDMYAKCNGDKEAQKIFDNIA-CKSTVPWTAMISAYVQKGKHEEGINVFSDMRRT 437

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G   D  TFA++L ACA++A++  G ++H+  +R+    +V  GSAL+D Y+KCG +  A
Sbjct: 438 GVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDA 497

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
            + F  MP RN  SWN++IS YA++G+ D  L  F QM   G  PD V+F+ VLSACSH 
Sbjct: 498 IKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHC 557

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           G V+E   HF SM+Q+Y + P+ E ++ MVD+L R G  D+ E+ + +MP  P+ ++W +
Sbjct: 558 GFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSS 617

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEP-QNAVNYVLLANMYASGGKWEDVAKARKAMKE 794
           VL + CR + +  EL +KAA+ LF ME  ++A  Y+ ++N+YA  G+W++VAK +KAM++
Sbjct: 618 VLNS-CRIH-KNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRD 675

Query: 795 AEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFD 854
             V+K    SWV +K   HVF A D+SHPE   I  K+  L+++M   GY P T  AL D
Sbjct: 676 RGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHD 735

Query: 855 LEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIV 913
           ++   K + + YHSE+ A+AF L       PI +MKNLR C DCH+A K IS+IV REI+
Sbjct: 736 VDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREII 795

Query: 914 LRDSNRFHHFNDGKCSCGDYW 934
           +RDS+RFHHF DG CSCGDYW
Sbjct: 796 VRDSSRFHHFKDGVCSCGDYW 816



 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 164/592 (27%), Positives = 284/592 (47%), Gaps = 63/592 (10%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           Q+     A +    N +I+ +++ G L+ A +LFD M +R +VSW  ++ GY     S E
Sbjct: 64  QVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKE 123

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
           A +++ +M R G   +   L ++L    E         +Q+H  V+K    ++ +V N L
Sbjct: 124 AFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVI--VQIHTHVIKLGYEYNLMVCNSL 181

Query: 130 IAMYGSCLESTDC---ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           +  Y  C   T C   A ++F+ +  +D +++NS+++ YS  G      +LF  +   G 
Sbjct: 182 VDAY--C--KTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSG- 236

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              +KP+++TF +L++AA    L  +   QQ+   V K   + +++VG+AL+  +++   
Sbjct: 237 ---IKPSDFTFAALLSAAVG--LDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQ 291

Query: 247 FYYARKIFEQM-----IQKNVVSMNGLMEGR----------------------------- 272
                K+F +M     I  NVV  +    G+                             
Sbjct: 292 VDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSI 351

Query: 273 -------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                  R G+++H   I  G      V N LV+MYAKC    +++ +F  +  K +V W
Sbjct: 352 ATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPW 411

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
             MIS   Q G +EE I  F  MRR G+ +   +  S L +CA+L  I LG+Q+H   ++
Sbjct: 412 TAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIR 471

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G  S+V   +ALL  YA  G ++  +K F  MPE + VSWN++I A+A +   V   + 
Sbjct: 472 SGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQN-GNVDGTLN 530

Query: 446 YYLDMRRAGWSPNGVTFINILAAAS--SFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
            +  M ++G+ P+ V+F+++L+A S   F    L H  ++    Y V  +     +++  
Sbjct: 531 SFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWH-FNSMTQIYEVTPKREHYTSMVDV 589

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMI-SGYIH--NELLPKAMNLVWFM 552
             + G  D+ EK+   M     E+ W+S++ S  IH  +EL  KA + ++ M
Sbjct: 590 LCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNM 641



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 202/407 (49%), Gaps = 50/407 (12%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K G+ Y++ +CN+L++ Y +   L  AS+LF  M ++++V++  +++GY+++G++
Sbjct: 163 HTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLN 222

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA ++F E+  +G   + +   ++L A    G    KFG QVH  VLK+N  ++  V N
Sbjct: 223 EEAIELFLELHNSGIKPSDFTFAALLSAA--VGLDDTKFGQQVHGFVLKTNFVWNVFVGN 280

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+  Y S  +  D   ++F E+   D IS+N +I+ Y+  G     F LF ++Q   F 
Sbjct: 281 ALLDYY-SKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRF- 338

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
                 ++ F +L++ A SS+     + +QI       G   +  V +ALV  +A+    
Sbjct: 339 ---DRRQFPFATLLSIATSSL--NLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGD 393

Query: 248 YYARKIFEQMIQKNVVSMNGLM----------EG-------RRK---------------- 274
             A+KIF+ +  K+ V    ++          EG       RR                 
Sbjct: 394 KEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRAC 453

Query: 275 --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                   G+++H  LIRSG    V  G+ L++ YAKCG + D+   F  M  ++SVSWN
Sbjct: 454 ANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWN 513

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
            +IS   QNG  +  + +F  M + G    + S +S LS+C+  G++
Sbjct: 514 ALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFV 560



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 172/354 (48%), Gaps = 42/354 (11%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +K  +  H  +LK  F ++VF+ N L++ Y +   +    KLF EMP+ + +S+  +++ 
Sbjct: 257 TKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITS 316

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y   G   E+  +F+++    F   ++   ++L           + G Q+HC  +     
Sbjct: 317 YAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIA--TSSLNLRMGRQIHCQAITVGAN 374

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
           F+  V N L+ MY  C    + A++IF+ I  +  + W ++IS Y Q+G       +FS 
Sbjct: 375 FESRVENALVDMYAKCNGDKE-AQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSD 433

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M+R G    +  ++ TF S++ A  +  L+   L +Q+ +++ ++G +S++Y GSAL+  
Sbjct: 434 MRRTG----VPADQATFASILRACAN--LASISLGRQLHSLLIRSGFMSNVYSGSALLDT 487

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
           +A+ G    A K F +M ++N VS                              N L++ 
Sbjct: 488 YAKCGCMTDAIKSFGEMPERNSVSW-----------------------------NALISA 518

Query: 301 YAKCGTIDDSRSVFRFMI----GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           YA+ G +D + + F+ MI      DSVS+ +++S     G  EEA+ +F +M +
Sbjct: 519 YAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQ 572



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 139/308 (45%), Gaps = 33/308 (10%)

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ--------------- 423
           I    +K G + +   SN  ++ + + G L    +VF  MP  +                
Sbjct: 30  IDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGK 89

Query: 424 ----------------VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
                           VSW  +IG +  S     EA + Y DMRR G  P+ VT + +L+
Sbjct: 90  LSKARELFDGMVERTAVSWTILIGGYLQSNQ-SKEAFRLYADMRRGGIEPDYVTLVTLLS 148

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
                    +  Q+H  VIK        + N+L+  Y K   +    ++F  M   +D V
Sbjct: 149 GFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLN-KDTV 207

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           ++NS+++GY +  L  +A+ L   +   G +   FTFA +LSA   +   + G +VH   
Sbjct: 208 TFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFV 267

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
           ++    ++V +G+AL+D YSK  ++D   + F  MP  +  S+N +I+ YA +G   ++ 
Sbjct: 268 LKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESF 327

Query: 648 TLFSQMKL 655
            LF +++ 
Sbjct: 328 DLFRKLQF 335



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 14/149 (9%)

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           V+ + + G + +A + FD MP +N  S N MISG+ + G   KA  LF  M     +   
Sbjct: 50  VNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWT 109

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD------K 716
           +   G L     +    E F+ +  M +  G+ P    +  +V LL   GEL+      +
Sbjct: 110 ILIGGYL----QSNQSKEAFRLYADMRRG-GIEP---DYVTLVTLLSGFGELETKNVIVQ 161

Query: 717 IEEFINKMPITPNSLIWRTVLGACCRANC 745
           I   + K+    N ++  +++ A C+ +C
Sbjct: 162 IHTHVIKLGYEYNLMVCNSLVDAYCKTHC 190


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 276/752 (36%), Positives = 421/752 (55%), Gaps = 43/752 (5%)

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------- 271
           + K G   DL+  + L++ + + G    A  +F++M ++N VS   L +G          
Sbjct: 75  ILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLY 134

Query: 272 ---RRKGKEV------------------------HGYLIRSGLFDMVAVGNGLVNMYAKC 304
               R+G E+                        H  +++ G      VG  L+N Y+ C
Sbjct: 135 SRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVC 194

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G++D +R+VF  ++ KD V W  ++S   +NG +E+++     MR  G M +N++  + L
Sbjct: 195 GSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTAL 254

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +   LG     + +HG+ LK     D  V   LL LY   G +S   KVF  MP++D V
Sbjct: 255 KASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVV 314

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
            W+ +I  F  +    +EAV  ++ MR A   PN  T  +IL   +      LG Q+H  
Sbjct: 315 PWSFMIARFCQN-GFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL 373

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
           V+K     +  + NAL+  Y KC +MD   K+FA +S + +EVSWN++I GY +     K
Sbjct: 374 VVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK-NEVSWNTVIVGYENLGEGGK 432

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
           A ++    ++    +   TF++ L ACAS+A+++ G++VH   ++      V + ++L+D
Sbjct: 433 AFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLID 492

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
           MY+KCG I +A   F+ M   +V SWN++ISGY+ HG G +AL +   MK     P+ +T
Sbjct: 493 MYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLT 552

Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           F+GVLS CS+AGL+D+G + F+SM + +G+ P LE ++CMV LLGR+G+LDK  + I  +
Sbjct: 553 FLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGI 612

Query: 725 PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
           P  P+ +IWR +L A    N    E  R++A  + ++ P++   YVL++NMYA   +W +
Sbjct: 613 PYEPSVMIWRAMLSASMNQN--NEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWAN 670

Query: 785 VAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGY 844
           VA  RK+MKE  VKKE G SW+  +  VH F  G   HP+  LI   L+ LN K   AGY
Sbjct: 671 VASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGY 730

Query: 845 VPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR--NSKLPIRIMKNLRVCGDCHSAFK 902
           VP     L D++ E K+  +  HSE++A+A+ L R  +S+  I IMKNLR+C DCHSA K
Sbjct: 731 VPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMK 790

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            IS IV R++V+RD NRFHHF+ G CSCGD+W
Sbjct: 791 VISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822



 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 173/602 (28%), Positives = 293/602 (48%), Gaps = 70/602 (11%)

Query: 84  LNRYALGSVLRAC-QECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC 142
           L+ +A G++LR C Q+  P   K    +HC +LK     D   +N+L+  Y       D 
Sbjct: 47  LDSHAYGAMLRRCIQKNDPISAK---AIHCDILKKGSCLDLFATNILLNAYVKAGFDKD- 102

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT-FGSLI 201
           A  +F+E+  R+ +S+ ++   Y+ + D I    L+SR+ REG  + L P+ +T F  L 
Sbjct: 103 ALNLFDEMPERNNVSFVTLAQGYACQ-DPIG---LYSRLHREG--HELNPHVFTSFLKLF 156

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
            +     L  + +   + + + K G  S+ +VG+AL++ ++  G+   AR +FE ++ K+
Sbjct: 157 VS-----LDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKD 211

Query: 262 VVSM---------NGLMEGRRK--------------------------------GKEVHG 280
           +V           NG  E   K                                 K VHG
Sbjct: 212 IVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHG 271

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
            ++++       VG GL+ +Y + G + D+  VF  M   D V W+ MI+   QNG   E
Sbjct: 272 QILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNE 331

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A+  F  MR   ++ + F+L S L+ CA      LG+Q+HG  +K+G D D+ VSNAL+ 
Sbjct: 332 AVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALID 391

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +YA    +   +K+F  +   ++VSWN+VI  + ++     +A   + +  R   S   V
Sbjct: 392 VYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGY-ENLGEGGKAFSMFREALRNQVSVTEV 450

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           TF + L A +S +   LG QVH   IK N A +  + N+L+  Y KCG++   + +F  M
Sbjct: 451 TFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM 510

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
            E  D  SWN++ISGY  + L  +A+ ++  M  R  + +  TF  VLS C++   +++G
Sbjct: 511 -ETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQG 569

Query: 581 ME-----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMI 634
            E     +   G+  CLE      + +V +  + G++D A +  + +P   +V  W +M+
Sbjct: 570 QECFESMIRDHGIEPCLEH----YTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAML 625

Query: 635 SG 636
           S 
Sbjct: 626 SA 627



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 161/577 (27%), Positives = 268/577 (46%), Gaps = 62/577 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  ILK G   D+F  N L+N YV+ G    A  LFDEMP+RN+VS+  +  GY  
Sbjct: 68  AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA- 126

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                +   ++  + R G  LN +   S L+       +  +    +H  ++K     + 
Sbjct: 127 ---CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA--EICPWLHSPIVKLGYDSNA 181

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V   LI  Y  C  S D AR +FE I  +D++ W  I+S Y + G      KL S M+ 
Sbjct: 182 FVGAALINAYSVC-GSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRM 240

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSY-LLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            GF     PN YTF    TA  +S+  G++   + +   + K   + D  VG  L+  + 
Sbjct: 241 AGFM----PNNYTFD---TALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYT 293

Query: 243 RLGNFYYARKIFEQMIQKNVVS-------------------------------------- 264
           +LG+   A K+F +M + +VV                                       
Sbjct: 294 QLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSS 353

Query: 265 -MNGLMEGRRK--GKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
            +NG   G+    G+++HG +++ G FD+ + V N L+++YAKC  +D +  +F  +  K
Sbjct: 354 ILNGCAIGKCSGLGEQLHGLVVKVG-FDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK 412

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           + VSWNT+I G +  G   +A   F    R+ +  +  +  S L +CASL  + LG Q+H
Sbjct: 413 NEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVH 472

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
           G  +K      V+VSN+L+ +YA  G +     VF  M   D  SWN++I  ++ +  L 
Sbjct: 473 GLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYS-THGLG 531

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN-- 498
            +A++    M+     PNG+TF+ +L+  S+  +   G +    +I+ +   E  +E+  
Sbjct: 532 RQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR-DHGIEPCLEHYT 590

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
            ++   G+ G++D   K+   +      + W +M+S 
Sbjct: 591 CMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 232/498 (46%), Gaps = 27/498 (5%)

Query: 275 GKEVHGYLIRSG-LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
            K +H  +++ G   D+ A  N L+N Y K G   D+ ++F  M  +++VS+ T+  G  
Sbjct: 68  AKAIHCDILKKGSCLDLFAT-NILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGY- 125

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
              C ++ I  +  + R+G   +     S L    SL    +   +H   +KLG DS+  
Sbjct: 126 --AC-QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAF 182

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V  AL++ Y+  G +     VF  +   D V W  ++  + ++     +++K    MR A
Sbjct: 183 VGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVEN-GYFEDSLKLLSCMRMA 241

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G+ PN  TF   L A+           VH Q++K     +  +   LL  Y + G+M D 
Sbjct: 242 GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDA 301

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            K+F  M  + D V W+ MI+ +  N    +A++L   M +     + FT +++L+ CA 
Sbjct: 302 FKVFNEMP-KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAI 360

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
                 G ++H   V+   + D+ + +AL+D+Y+KC ++D A + F  +  +N  SWN++
Sbjct: 361 GKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTV 420

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I GY   G G KA ++F +   +      VTF   L AC+    +D G        QV+G
Sbjct: 421 IVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGV-------QVHG 473

Query: 694 L------IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           L        ++   + ++D+  + G++   +   N+M  T +   W  ++     +    
Sbjct: 474 LAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNALI-----SGYST 527

Query: 748 TELGRKAANMLFEMEPQN 765
             LGR+A  +L  M+ ++
Sbjct: 528 HGLGRQALRILDIMKDRD 545


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 297/855 (34%), Positives = 455/855 (53%), Gaps = 84/855 (9%)

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
           +R   SW   +   ++  D       +  M   G R    P+ + F +++ A   S L  
Sbjct: 54  SRSTASWVDALRSRTRSNDFREAISTYIEMTVSGAR----PDNFAFPAVLKAV--SGLQD 107

Query: 212 SYLLQQILAMVKKAGL-LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN---- 266
               +QI A   K G   S + V + LV+ + + G      K+F+++  ++ VS N    
Sbjct: 108 LKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIA 167

Query: 267 ----------------------------------------GLMEGRRKGKEVHGYLIRSG 286
                                                   G+M G R GK++HGY +R G
Sbjct: 168 ALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG 227

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
                   N L+ MYAK G +DDS+++F   + +D VSWNTMIS   Q+  + EA+  F 
Sbjct: 228 -DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFR 286

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG-LDSDVSVSNALLSLYADA 405
            M  +G+     ++ S L +C+ L  + +G++IH   L+   L  +  V +AL+ +Y + 
Sbjct: 287 LMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNC 346

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM-RRAGWSPNGVTFIN 464
             +    +VF  +       WN++I  +A +  L  +A+  +++M + AG  PN  T  +
Sbjct: 347 RQVESGRRVFDHILGRRIELWNAMISGYARN-GLDEKALILFIEMIKVAGLLPNTTTMAS 405

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           ++ A            +H   +K     +  ++NAL+  Y + G+MD  E IF  M E R
Sbjct: 406 VMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSM-EVR 464

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ------------------RLDHFTFAT 566
           D VSWN+MI+GY+ +     A+ L+   MQR +                  + +  T  T
Sbjct: 465 DRVSWNTMITGYVLSGRYSNALVLL-HEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMT 523

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           VL  CA++A + +G E+HA  +R  L  D+ +GSALVDMY+KCG ++ + R F+ MP +N
Sbjct: 524 VLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKN 583

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDG-----PLPDHVTFVGVLSACSHAGLVDEG 681
           V +WN +I     HG G++AL LF  M  +        P+ VTF+ V +ACSH+GL+ EG
Sbjct: 584 VITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEG 643

Query: 682 FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL-IWRTVLGAC 740
              F  M   +G+ P  + ++C+VDLLGRAG+L++  E +N MP   + +  W ++LGAC
Sbjct: 644 LNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGAC 703

Query: 741 CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKE 800
            R + +  ELG  AA  L  +EP  A +YVLL+N+Y+S G W    + RK M++  VKKE
Sbjct: 704 -RIH-QNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKE 761

Query: 801 AGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESK 860
            GCSW+  +D VH F+AGD SHP+ + ++  L+ L++KMR  GYVP T   L +++ + K
Sbjct: 762 PGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEK 821

Query: 861 EDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNR 919
           E+L+  HSEK+A+AF +L       IR+ KNLRVC DCH+A KFISKI+ REI++RD  R
Sbjct: 822 ENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRR 881

Query: 920 FHHFNDGKCSCGDYW 934
           FHHF +G CSCGDYW
Sbjct: 882 FHHFKEGTCSCGDYW 896



 Score =  203 bits (516), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 178/731 (24%), Positives = 321/731 (43%), Gaps = 91/731 (12%)

Query: 36  LASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRA 95
           L S +      P R++ SW   +   T      EA   + EM  +G   + +A  +VL+A
Sbjct: 42  LTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKA 101

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGL-VSNVLIAMYGSCLESTDCARRIFEEIETRD 154
               G    K G Q+H   +K       + V+N L+ MYG C    D   ++F+ I  RD
Sbjct: 102 VS--GLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVC-KVFDRITDRD 158

Query: 155 LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS-SVLSGSY 213
            +SWNS I+   +        + F  MQ E    S     +T  S+  A  +  V+ G  
Sbjct: 159 QVSWNSFIAALCRFEKWEQALEAFRAMQMENMELS----SFTLVSVALACSNLGVMHGLR 214

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL----- 268
           L +Q+     + G     +  +AL++ +A+LG    ++ +FE  + +++VS N +     
Sbjct: 215 LGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFS 273

Query: 269 ------------------------------------MEGRRKGKEVHGYLIRSG-LFDMV 291
                                               +E    GKE+H Y++R+  L +  
Sbjct: 274 QSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENS 333

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM-RR 350
            VG+ LV+MY  C  ++  R VF  ++G+    WN MISG  +NG  E+A++ F  M + 
Sbjct: 334 FVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKV 393

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
            GL+ +  ++ S + +C         + IHG  +KLG   D  V NAL+ +Y+  G +  
Sbjct: 394 AGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDI 453

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR-----------------A 453
              +F  M   D+VSWN++I  +  S    S A+    +M+R                  
Sbjct: 454 SETIFDSMEVRDRVSWNTMITGYVLS-GRYSNALVLLHEMQRMENTKDVKKDDNDDEKGG 512

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
            + PN +T + +L   ++ +    G ++HA  I+  +A++ T+ +AL+  Y KCG ++  
Sbjct: 513 PYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLS 572

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR-----LDHFTFATVL 568
            ++F  M   ++ ++WN +I     +    +A+ L   M+    R      +  TF TV 
Sbjct: 573 RRVFNEMPN-KNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVF 631

Query: 569 SACASVATLERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +AC+    +  G+ +     H  GV    +    +    VD+  + G+++ A    + MP
Sbjct: 632 AACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACV----VDLLGRAGQLEEAYELVNTMP 687

Query: 624 VR--NVYSWNSMISGYARHGHGD-KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
                V +W+S++     H + +   +   + + L+  +  H  +V + +  S AGL ++
Sbjct: 688 AEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASH--YVLLSNIYSSAGLWNK 745

Query: 681 GFKHFKSMSQV 691
             +  K+M Q+
Sbjct: 746 AMEVRKNMRQM 756



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 170/609 (27%), Positives = 285/609 (46%), Gaps = 94/609 (15%)

Query: 2   KDAKLFHLQILKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           K  +  H   +K G+ +  V + NTL+N+Y + G +    K+FD + DR+ VSW   ++ 
Sbjct: 109 KTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAA 168

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGP-SGFKFGMQVHCLVLK--S 117
                   +A + F+ M      L+ + L SV  AC   G   G + G Q+H   L+   
Sbjct: 169 LCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGD 228

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR--------- 168
            +TF    +N L+AMY   L   D ++ +FE    RD++SWN++IS +SQ          
Sbjct: 229 QKTF---TNNALMAMYAK-LGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAF 284

Query: 169 ------------GDTI-SVFKLFSRMQR-----EGFRYSLKPNEYTFGSLITAAY----- 205
                       G TI SV    S ++R     E   Y L+ N+    S + +A      
Sbjct: 285 FRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYC 344

Query: 206 --SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ---- 259
               V SG  +   IL      G   +L+  +A++SG+AR G    A  +F +MI+    
Sbjct: 345 NCRQVESGRRVFDHIL------GRRIELW--NAMISGYARNGLDEKALILFIEMIKVAGL 396

Query: 260 -KNVVSMNGLM------EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
             N  +M  +M      E     + +HGY ++ G  +   V N L++MY++ G +D S +
Sbjct: 397 LPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISET 456

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR----------------DGLMSS 356
           +F  M  +D VSWNTMI+G   +G Y  A++    M+R                 G    
Sbjct: 457 IFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKP 516

Query: 357 N-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
           N  +L++ L  CA+L  I  G++IH   ++  L SD++V +AL+ +YA  G L+   +VF
Sbjct: 517 NAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVF 576

Query: 416 FLMPEHDQVSWNSVI---GAFADSEALVSEAVKYYLDM-----RRAGWSPNGVTFINILA 467
             MP  + ++WN +I   G     E    EA++ + +M     R     PN VTFI + A
Sbjct: 577 NEMPNKNVITWNVLIMACGMHGKGE----EALELFKNMVAEAGRGGEAKPNEVTFITVFA 632

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRD 525
           A S   +   G  +  + +K++   E T ++   ++   G+ G++++  ++   M    D
Sbjct: 633 ACSHSGLISEGLNLFYR-MKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFD 691

Query: 526 EV-SWNSMI 533
           +V +W+S++
Sbjct: 692 KVGAWSSLL 700



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 8/219 (3%)

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
           S  R   SW   +     +    +A++    M   G R D+F F  VL A + +  L+ G
Sbjct: 52  SPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTG 111

Query: 581 MEVHACGVR-ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
            ++HA  V+       V + + LV+MY KCG I    + FD +  R+  SWNS I+   R
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCR 171

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
               ++AL  F  M+++       T V V  ACS+ G++  G +  K +      +   +
Sbjct: 172 FEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVM-HGLRLGKQLHGYSLRVGDQK 230

Query: 700 QFS--CMVDLLGRAGELDK----IEEFINKMPITPNSLI 732
            F+   ++ +  + G +D      E F+++  ++ N++I
Sbjct: 231 TFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMI 269


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 257/619 (41%), Positives = 378/619 (61%), Gaps = 4/619 (0%)

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M  ++ VSW  MISGL QN  + EAI  FC MR  G + + F+  S + +CASLG I +G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +Q+H   LK G+ S++ V + L  +Y+  G +    KVF  MP  D+VSW ++I  ++  
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
                EA+  +  M     + +     + L A  +    K G  VH+ V+K    ++  +
Sbjct: 121 GEF-EEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFV 179

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
            NAL   Y K G+M+    +F   SE R+ VS+  +I GY+  E + K +++   + ++G
Sbjct: 180 GNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG 239

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
              + FTF++++ ACA+ A LE+G ++HA  ++   + D  + S LVDMY KCG ++ A 
Sbjct: 240 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAI 299

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
           + FD +      +WNS++S + +HG G  A+ +F +M   G  P+ +TF+ +L+ CSHAG
Sbjct: 300 QAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAG 359

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
           LV+EG  +F SM + YG++P  E +SC++DLLGRAG L + +EFIN+MP  PN+  W + 
Sbjct: 360 LVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSF 419

Query: 737 LGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAE 796
           LGA CR +  K E+G+ AA  L ++EP+N+   VLL+N+YA+  +WEDV   R  M++  
Sbjct: 420 LGA-CRIHGDK-EMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGN 477

Query: 797 VKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLE 856
           VKK  G SWV +    HVF A D SHP K  IYEKL  L  +++ AGYVP+T     D++
Sbjct: 478 VKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMD 537

Query: 857 PESKEDLVSYHSEKIAVAFVL-TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLR 915
              KE L+  HSE+IAVAF L +     PI + KNLRVC DCHSA KFISK+ GR+I++R
Sbjct: 538 DSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVR 597

Query: 916 DSNRFHHFNDGKCSCGDYW 934
           D++RFHHF DG CSCGDYW
Sbjct: 598 DNSRFHHFTDGSCSCGDYW 616



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 206/387 (53%), Gaps = 13/387 (3%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK++H   ++ G+   + VG+ L +MY+KCG + D+  VF  M  KD VSW  MI G  +
Sbjct: 60  GKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSK 119

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G +EEA++ F  M  + +      L STL +C +L     G+ +H   +KLG +SD+ V
Sbjct: 120 IGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFV 179

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPE-HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
            NAL  +Y+ AG +     VF +  E  + VS+  +I  + ++E  + + +  ++++RR 
Sbjct: 180 GNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQ-IEKGLSVFVELRRQ 238

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G  PN  TF +++ A ++ +  + G Q+HAQV+K N   +  + + L+  YGKCG ++  
Sbjct: 239 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQA 298

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            + F  + +   E++WNS++S +  + L   A+ +   M+ RG + +  TF ++L+ C+ 
Sbjct: 299 IQAFDEIGDPT-EIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSH 357

Query: 574 VATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVR-NVY 628
              +E G++      +    + VV G    S ++D+  + GR+  A  F + MP   N +
Sbjct: 358 AGLVEEGLDYFYSMDKT---YGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAF 414

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKL 655
            W S +   A   HGDK +   +  KL
Sbjct: 415 GWCSFLG--ACRIHGDKEMGKLAAEKL 439



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 187/431 (43%), Gaps = 53/431 (12%)

Query: 46  MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFK 105
           MP RN VSW  ++SG +     +EA + F  M   G +  ++A  S +RAC   G    +
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG--SIE 58

Query: 106 FGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY 165
            G Q+HCL LK     +  V + L  MY  C    D A ++FEE+  +D +SW ++I  Y
Sbjct: 59  MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFD-ACKVFEEMPCKDEVSWTAMIDGY 117

Query: 166 SQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKA 225
           S+ G+       F +M  E     +  +++   S + A     L      + + + V K 
Sbjct: 118 SKIGEFEEALLAFKKMIDE----EVTIDQHVLCSTLGAC--GALKACKFGRSVHSSVVKL 171

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ-KNVVSMNGLMEG------------- 271
           G  SD++VG+AL   +++ G+   A  +F    + +NVVS   L++G             
Sbjct: 172 GFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSV 231

Query: 272 ----RRKGKE------------------------VHGYLIRSGLFDMVAVGNGLVNMYAK 303
               RR+G E                        +H  +++    +   V + LV+MY K
Sbjct: 232 FVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGK 291

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           CG ++ +   F  +     ++WN+++S   Q+G  ++AI  F  M   G+  +  + IS 
Sbjct: 292 CGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISL 351

Query: 364 LSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EH 421
           L+ C+  G +  G    +      G+       + ++ L   AG L    +    MP E 
Sbjct: 352 LTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEP 411

Query: 422 DQVSWNSVIGA 432
           +   W S +GA
Sbjct: 412 NAFGWCSFLGA 422



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 148/315 (46%), Gaps = 19/315 (6%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD-EMPDRNSVSWACIVSGYTHKGM 66
           H  ++K GF  D+F+ N L ++Y + GD+ SAS +F  +   RN VS+ C++ GY     
Sbjct: 165 HSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQ 224

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             +   +F E+ R G   N +   S+++AC     +  + G Q+H  V+K N   D  VS
Sbjct: 225 IEKGLSVFVELRRQGIEPNEFTFSSLIKAC--ANQAALEQGTQLHAQVMKINFDEDPFVS 282

Query: 127 NVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           ++L+ MYG C  LE    A + F+EI     I+WNS++SV+ Q G      K+F RM   
Sbjct: 283 SILVDMYGKCGLLEQ---AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDR 339

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G    +KPN  TF SL+T    + L     L    +M K  G++      S ++    R 
Sbjct: 340 G----VKPNAITFISLLTGCSHAGLVEEG-LDYFYSMDKTYGVVPGEEHYSCVIDLLGRA 394

Query: 245 GNFYYARKIFEQM-IQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG----LV 298
           G    A++   +M  + N       +   R  G +  G L    L  +    +G    L 
Sbjct: 395 GRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLS 454

Query: 299 NMYAKCGTIDDSRSV 313
           N+YA     +D RSV
Sbjct: 455 NIYANERQWEDVRSV 469



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 157/352 (44%), Gaps = 43/352 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H   LK G   ++F+ + L ++Y + G +  A K+F+EMP ++ VSW  ++ GY+ 
Sbjct: 60  GKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSK 119

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   EA   FK+M+     ++++ L S L AC        KFG  VH  V+K     D 
Sbjct: 120 IGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACG--ALKACKFGRSVHSSVVKLGFESDI 177

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V N L  MY    +    +     + E R+++S+  +I  Y +         +F  ++R
Sbjct: 178 FVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR 237

Query: 184 EGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           +G    ++PNE+TF SLI A A  + L       Q+ A V K     D +V S LV  + 
Sbjct: 238 QG----IEPNEFTFSSLIKACANQAALEQG---TQLHAQVMKINFDEDPFVSSILVDMYG 290

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
           + G    A + F+++     ++                              N LV+++ 
Sbjct: 291 KCGLLEQAIQAFDEIGDPTEIAW-----------------------------NSLVSVFG 321

Query: 303 KCGTIDDSRSVFRFMIGK----DSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           + G   D+  +F  M+ +    +++++ ++++G    G  EE +  F +M +
Sbjct: 322 QHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDK 373


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 293/805 (36%), Positives = 439/805 (54%), Gaps = 67/805 (8%)

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD-LYVGSALVSGFARLGNFY 248
           +KP+ Y F +L+ A     L    L +QI A V K G   D + V + LV+ + + G+F 
Sbjct: 93  IKPDNYAFPALLKAVAD--LQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFG 150

Query: 249 YARKIFEQMIQKNVVSMNGLM--------------------------------------- 269
              K+F+++ ++N VS N L+                                       
Sbjct: 151 AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS 210

Query: 270 -----EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                EG   GK+VH Y +R G  +   + N LV MY K G +  S+ +     G+D V+
Sbjct: 211 NLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVT 269

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           WNT++S L QN    EA+     M  +G+    F++ S L +C+ L  +  G+++H   L
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329

Query: 385 KLG-LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           K G LD +  V +AL+ +Y +   +    +VF  M +     WN++I  ++ +E    EA
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH-DKEA 388

Query: 444 VKYYLDMRR-AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           +  ++ M   AG   N  T   ++ A            +H  V+K  +  +  ++N L+ 
Sbjct: 389 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 448

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE-------LLPKAMNLVWFMMQR 555
            Y + G++D   +IF +M E RD V+WN+MI+GY+ +E       LL K  NL   + + 
Sbjct: 449 MYSRLGKIDIAMRIFGKM-EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 507

Query: 556 GQRL----DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR 611
             R+    +  T  T+L +CA+++ L +G E+HA  ++  L  DV +GSALVDMY+KCG 
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 567

Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
           +  + + FD +P +NV +WN +I  Y  HG+G +A+ L   M + G  P+ VTF+ V +A
Sbjct: 568 LQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAA 627

Query: 672 CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
           CSH+G+VDEG + F  M   YG+ P  + ++C+VDLLGRAG + +  + +N MP   N  
Sbjct: 628 CSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKA 687

Query: 732 -IWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARK 790
             W ++LGA    N    E+G  AA  L ++EP  A +YVLLAN+Y+S G W+   + R+
Sbjct: 688 GAWSSLLGASRIHN--NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRR 745

Query: 791 AMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKF 850
            MKE  V+KE GCSW+   D VH FVAGD SHP+ + +   L+ L ++MR  GYVP T  
Sbjct: 746 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSC 805

Query: 851 ALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVG 909
            L ++E + KE L+  HSEK+A+AF +L  +    IR+ KNLRVC DCH A KFISKIV 
Sbjct: 806 VLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVD 865

Query: 910 REIVLRDSNRFHHFNDGKCSCGDYW 934
           REI+LRD  RFH F +G CSCGDYW
Sbjct: 866 REIILRDVRRFHRFKNGTCSCGDYW 890



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 157/596 (26%), Positives = 274/596 (45%), Gaps = 68/596 (11%)

Query: 5   KLFHLQILKHGFAYD-VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           K  H  + K G+  D V + NTL+N+Y + GD  +  K+FD + +RN VSW  ++S    
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 176

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG-PSGFKFGMQVHCLVLKSNQTFD 122
                 A + F+ M+      + + L SV+ AC     P G   G QVH   L+  +  +
Sbjct: 177 FEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE-LN 235

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             + N L+AMYG  L     ++ +      RDL++WN+++S   Q    +   +    M 
Sbjct: 236 SFIINTLVAMYGK-LGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD-LYVGSALVSGF 241
            EG    ++P+E+T  S++ A   S L      +++ A   K G L +  +VGSALV  +
Sbjct: 295 LEG----VEPDEFTISSVLPAC--SHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 348

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE------------------------ 277
                    R++F+ M  + +   N ++ G  + +                         
Sbjct: 349 CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 408

Query: 278 ------------------VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                             +HG++++ GL     V N L++MY++ G ID +  +F  M  
Sbjct: 409 AGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED 468

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMR-----------RDGLMSSNFSLISTLSSCA 368
           +D V+WNTMI+G   +  +E+A++    M+           R  L  ++ +L++ L SCA
Sbjct: 469 RDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA 528

Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
           +L  +  G++IH   +K  L +DV+V +AL+ +YA  G L    KVF  +P+ + ++WN 
Sbjct: 529 ALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNV 588

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV-HAQVIK 487
           +I A+        EA+     M   G  PN VTFI++ AA S   M   G ++ +     
Sbjct: 589 IIMAYG-MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPD 647

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV-SWNSMI-SGYIHNEL 541
           Y V   +     ++   G+ G + +  ++   M    ++  +W+S++ +  IHN L
Sbjct: 648 YGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNL 703



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 215/426 (50%), Gaps = 30/426 (7%)

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W  ++    ++    EA++ +  M   G+   N++  + L + A L  + LG+QIH    
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 385 KLGLDSD-VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA--LVS 441
           K G   D V+V+N L++LY   G      KVF  + E +QVSWNS+I +    E   +  
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK---LGHQVHAQVIKYNVANETTIEN 498
           EA +  LD       P+  T ++++ A S+  M +   +G QVHA  ++    N   I N
Sbjct: 185 EAFRCMLD---ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-N 240

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
            L++ YGK G++   + +       RD V+WN+++S    NE L +A+  +  M+  G  
Sbjct: 241 TLVAMYGKLGKLASSKVLLGSFGG-RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVR-ACLEFDVVIGSALVDMYSKCGRIDYASR 617
            D FT ++VL AC+ +  L  G E+HA  ++   L+ +  +GSALVDMY  C ++    R
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD-GPLPDHVTFVGVLSACSHAG 676
            FD M  R +  WN+MI+GY+++ H  +AL LF  M+   G L +  T  GV+ AC  +G
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419

Query: 677 LVDEGFKHFKSMSQVYGLIPQ----LEQF--SCMVDLLGRAGELDKIEEFINKMP----I 726
                   F     ++G + +     ++F  + ++D+  R G++D       KM     +
Sbjct: 420 A-------FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 472

Query: 727 TPNSLI 732
           T N++I
Sbjct: 473 TWNTMI 478



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 227/496 (45%), Gaps = 51/496 (10%)

Query: 2   KDAKLFHLQILKHG-FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +  K  H   LK+G    + F+ + L+++Y     + S  ++FD M DR    W  +++G
Sbjct: 319 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG 378

Query: 61  YTHKGMSNEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           Y+      EA  +F  M   AG L N   +  V+ AC   G   F     +H  V+K   
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG--AFSRKEAIHGFVVKRGL 436

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY---SQRGDTISVFK 176
             D  V N L+ MY S L   D A RIF ++E RDL++WN++I+ Y       D + +  
Sbjct: 437 DRDRFVQNTLMDMY-SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLH 495

Query: 177 LFSRMQRE----GFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSD 230
               ++R+      R SLKPN  T  +++   AA S++  G    ++I A   K  L +D
Sbjct: 496 KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG----KEIHAYAIKNNLATD 551

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGL 287
           + VGSALV  +A+ G    +RK+F+Q+ QKNV++ N ++        G+E    L+R  +
Sbjct: 552 VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID-LLRMMM 610

Query: 288 FDMVAVGN-GLVNMYAKC---GTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCY 338
              V       ++++A C   G +D+   +F  M     +   S  +  ++  L + G  
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRI 670

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           +EA      M RD   +  +S  S L +      + +G +I  + L + L+ +V+    L
Sbjct: 671 KEAYQLMNMMPRDFNKAGAWS--SLLGASRIHNNLEIG-EIAAQNL-IQLEPNVASHYVL 726

Query: 399 LS-LYADAGYLSRCLKVFFLMPEH-----DQVSW---NSVIGAF--ADSEALVSEAVKYY 447
           L+ +Y+ AG   +  +V   M E         SW      +  F   DS    SE +  Y
Sbjct: 727 LANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGY 786

Query: 448 LD-----MRRAGWSPN 458
           L+     MR+ G+ P+
Sbjct: 787 LETLWERMRKEGYVPD 802


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 287/805 (35%), Positives = 444/805 (55%), Gaps = 67/805 (8%)

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD-LYVGSALVSGFARLGNFY 248
           +KP+ + F +L+ A     L    L +QI A V K G   D + V + LV+ + + G+F 
Sbjct: 89  IKPDNFAFPALLKAVAD--LQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFG 146

Query: 249 YARKIFEQMIQKNVVSMNGLM--------------------------------------- 269
              K+F+++ ++N VS N L+                                       
Sbjct: 147 AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACS 206

Query: 270 -----EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                EG   GK+VH Y +R G  +   + N LV MY K G +  S+ +     G+D V+
Sbjct: 207 NFPMPEGLLMGKQVHAYGLRKGELNSFII-NTLVAMYGKMGKLASSKVLLGSFEGRDLVT 265

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           WNT++S L QN  + EA+     M  +G+    F++ S L +C+ L  +  G+++H   L
Sbjct: 266 WNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYAL 325

Query: 385 KLG-LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           K G LD +  V +AL+ +Y +   +    +VF  M +     WN++I  +A +E    EA
Sbjct: 326 KNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNE-YDEEA 384

Query: 444 VKYYLDMRR-AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           +  +++M   AG   N  T   ++ A            +H  V+K  +  +  ++NAL+ 
Sbjct: 385 LLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMD 444

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM-------QR 555
            Y + G++D  ++IF +M E RD V+WN++I+GY+ +E    A+ ++  M        +R
Sbjct: 445 MYSRLGKIDIAKRIFGKM-EDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASER 503

Query: 556 GQRL----DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR 611
             R+    +  T  T+L +CA+++ L +G E+HA  ++  L  DV +GSALVDMY+KCG 
Sbjct: 504 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 563

Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
           +  + + FD +P+RNV +WN ++  Y  HG+   A+ +   M + G  P+ VTF+ V +A
Sbjct: 564 LQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAA 623

Query: 672 CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
           CSH+G+V+EG K F +M + YG+ P  + ++C+VDLLGRAG + +  + IN +P   +  
Sbjct: 624 CSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKA 683

Query: 732 -IWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARK 790
             W ++LGAC   N    E+G  AA  L ++EP  A +YVLLAN+Y+S G W    + R+
Sbjct: 684 GAWSSLLGACRIHN--NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRR 741

Query: 791 AMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKF 850
            MK   V+KE GCSW+   D VH FVAGD SHP+ + +   L+ L ++MR  GY+P T  
Sbjct: 742 NMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYIPDTSC 801

Query: 851 ALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVG 909
            L ++E + KE L+  HSEK+A+AF +L  +    IR+ KNLRVC DCH A KFISK+V 
Sbjct: 802 VLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKVVD 861

Query: 910 REIVLRDSNRFHHFNDGKCSCGDYW 934
           REI+LRD  RFHHF +G CSCGDYW
Sbjct: 862 REIILRDVRRFHHFKNGTCSCGDYW 886



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 154/596 (25%), Positives = 272/596 (45%), Gaps = 68/596 (11%)

Query: 5   KLFHLQILKHGFAYD-VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           K  H  + K G+  D V + NTL+N+Y + GD  +  K+FD + +RN VSW  ++S    
Sbjct: 113 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 172

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG-PSGFKFGMQVHCLVLKSNQTFD 122
                 A + F+ M+      + + L SV  AC     P G   G QVH   L+  +  +
Sbjct: 173 FEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGE-LN 231

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             + N L+AMYG  +     ++ +    E RDL++WN+++S   Q    +   +    M 
Sbjct: 232 SFIINTLVAMYGK-MGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMV 290

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD-LYVGSALVSGF 241
            EG    ++P+ +T  S++ A   S L      +++ A   K G L +  +VGSALV  +
Sbjct: 291 LEG----VEPDGFTISSVLPAC--SHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 344

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------------------------- 272
                     ++F+ M  + +   N ++ G                              
Sbjct: 345 CNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTM 404

Query: 273 -------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                         K + +HG++++ GL     V N L++MY++ G ID ++ +F  M  
Sbjct: 405 AGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMED 464

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMR-----------RDGLMSSNFSLISTLSSCA 368
           +D V+WNT+I+G   +  +E+A++    M+           R  L  ++ +L++ L SCA
Sbjct: 465 RDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCA 524

Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
           +L  +  G++IH   +K  L +DV+V +AL+ +YA  G L    KVF  +P  + ++WN 
Sbjct: 525 ALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNV 584

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK- 487
           ++ A+        +A+     M   G  PN VTFI++ AA S   M   G ++   + K 
Sbjct: 585 IVMAYG-MHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKD 643

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV-SWNSMISG-YIHNEL 541
           Y V   +     ++   G+ G + +  ++   +    D+  +W+S++    IHN L
Sbjct: 644 YGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNL 699



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/427 (30%), Positives = 218/427 (51%), Gaps = 27/427 (6%)

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W  ++    ++    EA++ +  M   G+   NF+  + L + A L  + LG+QIH    
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 385 KLGLDSD-VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA--LVS 441
           K G   D V+V+N L++LY   G      KVF  + E +QVSWNS+I +    E   +  
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK---LGHQVHAQVIKYNVANETTIEN 498
           EA +  LD       P+  T +++  A S+F M +   +G QVHA  ++    N   I N
Sbjct: 181 EAFRCMLD---EDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFII-N 236

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
            L++ YGK G++    K+     E RD V+WN+++S    NE   +A+  +  M+  G  
Sbjct: 237 TLVAMYGKMGKLAS-SKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVE 295

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVR-ACLEFDVVIGSALVDMYSKCGRIDYASR 617
            D FT ++VL AC+ +  L  G E+HA  ++   L+ +  +GSALVDMY  C ++    R
Sbjct: 296 PDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCR 355

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD-GPLPDHVTFVGVLSACSHAG 676
            FD M  R +  WN+MI+GYA++ + ++AL LF +M+   G L +  T  GV+ AC  +G
Sbjct: 356 VFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSG 415

Query: 677 LVDEGFKHFKSMSQVYGLIPQ----LEQF--SCMVDLLGRAGELDKIEEFINKMPITPNS 730
                   F     ++G + +     ++F  + ++D+  R G++D  +    KM    + 
Sbjct: 416 A-------FSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKME-DRDL 467

Query: 731 LIWRTVL 737
           + W T++
Sbjct: 468 VTWNTII 474



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 143/276 (51%), Gaps = 18/276 (6%)

Query: 2   KDAKLFHLQILKHG-FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +  K  H   LK+G    + F+ + L+++Y     + S  ++FD M DR    W  +++G
Sbjct: 315 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITG 374

Query: 61  YTHKGMSNEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           Y       EA  +F EM   AG L N   +  V+ AC   G   F     +H  V+K   
Sbjct: 375 YAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSG--AFSKKEAIHGFVVKRGL 432

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS--VYSQRG-DTISVFK 176
             D  V N L+ MY S L   D A+RIF ++E RDL++WN+II+  V+S+R  D + +  
Sbjct: 433 DRDRFVQNALMDMY-SRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLH 491

Query: 177 LFSRMQREGF----RYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSD 230
               ++R+      R SLKPN  T  +++   AA S++  G    ++I A   K  L +D
Sbjct: 492 KMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKG----KEIHAYAIKNNLATD 547

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN 266
           + VGSALV  +A+ G    +RK+F+Q+  +NV++ N
Sbjct: 548 VAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWN 583



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 131/270 (48%), Gaps = 7/270 (2%)

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
           F+   H    W  ++ +   S  L+ EAV  Y+DM   G  P+   F  +L A +     
Sbjct: 51  FISQSHSPEWWIDLLRSKVRSN-LLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDM 109

Query: 476 KLGHQVHAQVIKYNVA-NETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            LG Q+HA V K+    +  T+ N L++ Y KCG+     K+F R+SE R++VSWNS+IS
Sbjct: 110 DLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE-RNQVSWNSLIS 168

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE---RGMEVHACGVRAC 591
                E    A+     M+        FT  +V  AC++    E    G +VHA G+R  
Sbjct: 169 SLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG 228

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
            E +  I + LV MY K G++  +         R++ +WN+++S   ++    +AL    
Sbjct: 229 -ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLR 287

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           +M L+G  PD  T   VL ACSH  ++  G
Sbjct: 288 EMVLEGVEPDGFTISSVLPACSHLEMLRTG 317


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 289/802 (36%), Positives = 450/802 (56%), Gaps = 39/802 (4%)

Query: 147 FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG-SLITAAY 205
           F+ I +R    +N +I   S+RG      +L  +M          PN  +F   +I + Y
Sbjct: 39  FDPITSR----FNFMIKDLSERGQLCQARQLLDQM----------PNRNSFSIDIIISGY 84

Query: 206 SSVLSGSYLL-QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM----IQK 260
             V SG+  + ++I     +  +++     + ++  +++   F  A K+F +M     Q 
Sbjct: 85  --VKSGNLTVARRIFDDTDERTVVA----WTTMIGAYSKSNRFGDAFKLFAEMHRSGSQP 138

Query: 261 NVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
           + V+   L+ G       ++  + H  +++ G      V N L++ Y K G +D +R +F
Sbjct: 139 DYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLF 198

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             M G DSVS+N MI+G   NG  EEAI  F  M+  G   S+F+  + +S+   L    
Sbjct: 199 LEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTA 258

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
            GQQIHG  +K     +V V NA L  Y+    ++   K+F  MPE D VS+N +I A+A
Sbjct: 259 FGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYA 318

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANET 494
                V E++  + +++   +      F  +L+ A+S    ++G Q+HAQV+      + 
Sbjct: 319 -WVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDF 377

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
            + N+L+  Y KCG+ ++ ++IF R+S R   V W +MIS  +   L    + L + M +
Sbjct: 378 RVSNSLVDMYAKCGKFEEADRIFLRLSSR-STVPWTAMISANVQRGLHENGLKLFYEMRR 436

Query: 555 RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
                D  TFA VL A A++A++  G ++H+C +R+    +V  G AL+DMY+ C  I  
Sbjct: 437 ANVSADQATFACVLKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKD 495

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
           A + F+ M  RNV +WN+++S YA++G G   L  F +M + G  PD V+F+ +L+ACSH
Sbjct: 496 AIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSH 555

Query: 675 AGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWR 734
             LV+EG K+F  MS VY L P+ E ++ MVD L R+G  D+ E+ + +MP  P+ ++W 
Sbjct: 556 CRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWT 615

Query: 735 TVLGACCRANCRKTELGRKAANMLFEMEP-QNAVNYVLLANMYASGGKWEDVAKARKAMK 793
           +VL + CR + +   L RKAA  LF M+  ++A  YV ++N++A  G+W+ V K +KAM+
Sbjct: 616 SVLNS-CRIH-KNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMR 673

Query: 794 EAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALF 853
           +  V+K    SWV +K  VHVF A D+ HP++  I  K++ L ++M   GY P    A  
Sbjct: 674 DRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQ 733

Query: 854 DLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREI 912
           +++ ESK D + YHSE++A+AF L    +  PI +MKNLR C DCH+A K ISKIVGREI
Sbjct: 734 NVDKESKIDSLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKVISKIVGREI 793

Query: 913 VLRDSNRFHHFNDGKCSCGDYW 934
            +RDSNRFHHF DG CSCGDYW
Sbjct: 794 TVRDSNRFHHFRDGSCSCGDYW 815



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 148/567 (26%), Positives = 268/567 (47%), Gaps = 53/567 (9%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           Q+L      + F  + +I+ YV+ G+L  A ++FD+  +R  V+W  ++  Y+      +
Sbjct: 64  QLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGD 123

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
           A K+F EM R+G   +     ++L  C +   +  K   Q H  ++K     +  V N L
Sbjct: 124 AFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVA--KELYQAHAQIVKLGHHLNHRVCNTL 181

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           +  Y       D ARR+F E+   D +S+N +I+ Y+  G      +LF  MQ  GF   
Sbjct: 182 LDSYFKT-GGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGF--- 237

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
            KP+++TF ++I+A+    L  +   QQI   V K   + +++VG+A +  +++      
Sbjct: 238 -KPSDFTFAAVISASVG--LDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNE 294

Query: 250 ARKIFEQMIQKNVVSMNGLME-----GRRK------------------------------ 274
            RK+F +M + + VS N ++      G+ K                              
Sbjct: 295 VRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAAS 354

Query: 275 ------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
                 G+++H  ++ S       V N LV+MYAKCG  +++  +F  +  + +V W  M
Sbjct: 355 SLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAM 414

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           IS   Q G +E  +  F  MRR  + +   +    L + A+L  I+LG+Q+H   ++ G 
Sbjct: 415 ISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGF 474

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
             +V    ALL +YA+   +   +K F  M E + V+WN+++ A+A +       +K + 
Sbjct: 475 -MNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQN-GDGKGTLKSFE 532

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKC 507
           +M  +G+ P+ V+F+ IL A S   + + G +    +   YN+A +     A++    + 
Sbjct: 533 EMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRS 592

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMIS 534
           G  D+ EK+  +M    DE+ W S+++
Sbjct: 593 GRFDEAEKLMGQMPFEPDEIVWTSVLN 619



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 229/510 (44%), Gaps = 61/510 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H QI+K G   +  +CNTL++ Y + G L SA +LF EM   +SVS+  +++GY + G++
Sbjct: 163 HAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLN 222

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA ++F EM   GF  + +   +V+ A    G     FG Q+H  V+K++   +  V N
Sbjct: 223 EEAIELFVEMQNLGFKPSDFTFAAVISA--SVGLDDTAFGQQIHGFVVKTSFIRNVFVGN 280

Query: 128 VLIAMYGSCLESTDC---ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
             +  Y       DC    R++F E+   D +S+N II+ Y+  G       LF  +Q  
Sbjct: 281 AFLDFYS----KHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFT 336

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
            F        + F ++++ A SS+     + +Q+ A V  +    D  V ++LV  +A+ 
Sbjct: 337 TF----DRKNFPFPTMLSIAASSL--DLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKC 390

Query: 245 GNFYYARKIF-----------EQMIQKNV---VSMNGL---MEGRRK------------- 274
           G F  A +IF             MI  NV   +  NGL    E RR              
Sbjct: 391 GKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVL 450

Query: 275 -----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      GK++H  +IRSG  ++ + G  L++MYA C +I D+   F  M  ++ V
Sbjct: 451 KASANLASILLGKQLHSCVIRSGFMNVYS-GCALLDMYANCASIKDAIKTFEEMSERNVV 509

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           +WN ++S   QNG  +  + +F  M   G    + S +  L++C+    +  G +   + 
Sbjct: 510 TWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDM 569

Query: 384 LKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA--FADSEAL 439
             +  L        A++     +G      K+   MP E D++ W SV+ +     + AL
Sbjct: 570 SGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYAL 629

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
             +A     +M+    +   VT  NI A A
Sbjct: 630 ARKAAGQLFNMKVLRDAAPYVTMSNIFAEA 659


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 293/805 (36%), Positives = 439/805 (54%), Gaps = 67/805 (8%)

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD-LYVGSALVSGFARLGNFY 248
           +KP+ Y F +L+ A     L    L +QI A V K G   D + V + LV+ + + G+F 
Sbjct: 6   IKPDNYAFPALLKAVAD--LQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFG 63

Query: 249 YARKIFEQMIQKNVVSMNGLM--------------------------------------- 269
              K+F+++ ++N VS N L+                                       
Sbjct: 64  AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS 123

Query: 270 -----EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                EG   GK+VH Y +R G  +   + N LV MY K G +  S+ +     G+D V+
Sbjct: 124 NLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVT 182

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           WNT++S L QN    EA+     M  +G+    F++ S L +C+ L  +  G+++H   L
Sbjct: 183 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 242

Query: 385 KLG-LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           K G LD +  V +AL+ +Y +   +    +VF  M +     WN++I  ++ +E    EA
Sbjct: 243 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH-DKEA 301

Query: 444 VKYYLDMRR-AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           +  ++ M   AG   N  T   ++ A            +H  V+K  +  +  ++N L+ 
Sbjct: 302 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 361

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE-------LLPKAMNLVWFMMQR 555
            Y + G++D   +IF +M E RD V+WN+MI+GY+ +E       LL K  NL   + + 
Sbjct: 362 MYSRLGKIDIAMRIFGKM-EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 420

Query: 556 GQRL----DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR 611
             R+    +  T  T+L +CA+++ L +G E+HA  ++  L  DV +GSALVDMY+KCG 
Sbjct: 421 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 480

Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
           +  + + FD +P +NV +WN +I  Y  HG+G +A+ L   M + G  P+ VTF+ V +A
Sbjct: 481 LQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAA 540

Query: 672 CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
           CSH+G+VDEG + F  M   YG+ P  + ++C+VDLLGRAG + +  + +N MP   N  
Sbjct: 541 CSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKA 600

Query: 732 -IWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARK 790
             W ++LGA    N    E+G  AA  L ++EP  A +YVLLAN+Y+S G W+   + R+
Sbjct: 601 GAWSSLLGASRIHN--NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRR 658

Query: 791 AMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKF 850
            MKE  V+KE GCSW+   D VH FVAGD SHP+ + +   L+ L ++MR  GYVP T  
Sbjct: 659 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSC 718

Query: 851 ALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVG 909
            L ++E + KE L+  HSEK+A+AF +L  +    IR+ KNLRVC DCH A KFISKIV 
Sbjct: 719 VLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVD 778

Query: 910 REIVLRDSNRFHHFNDGKCSCGDYW 934
           REI+LRD  RFH F +G CSCGDYW
Sbjct: 779 REIILRDVRRFHRFKNGTCSCGDYW 803



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 156/598 (26%), Positives = 272/598 (45%), Gaps = 70/598 (11%)

Query: 4   AKLFHLQILKHGFAYD-VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
            K  H  + K G+  D V + NTL+N+Y + GD  +  K+FD + +RN VSW  ++S   
Sbjct: 29  GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 88

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG-PSGFKFGMQVHCLVLKSNQTF 121
                  A + F+ M+      + + L SV+ AC     P G   G QVH   L+  +  
Sbjct: 89  SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE-L 147

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  + N L+AMYG  L     ++ +      RDL++WN+++S   Q    +   +    M
Sbjct: 148 NSFIINTLVAMYGK-LGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM 206

Query: 182 QREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
             EG    ++P+E+T  S++ A      + +G  L    L   K   L  + +VGSALV 
Sbjct: 207 VLEG----VEPDEFTISSVLPACSHLEMLRTGKELHAYAL---KNGSLDENSFVGSALVD 259

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE---------------------- 277
            +         R++F+ M  + +   N ++ G  + +                       
Sbjct: 260 MYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANST 319

Query: 278 --------------------VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                               +HG++++ GL     V N L++MY++ G ID +  +F  M
Sbjct: 320 TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 379

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR-----------RDGLMSSNFSLISTLSS 366
             +D V+WNTMI+G   +  +E+A++    M+           R  L  ++ +L++ L S
Sbjct: 380 EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPS 439

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSW 426
           CA+L  +  G++IH   +K  L +DV+V +AL+ +YA  G L    KVF  +P+ + ++W
Sbjct: 440 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITW 499

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV-HAQV 485
           N +I A+        EA+     M   G  PN VTFI++ AA S   M   G ++ +   
Sbjct: 500 NVIIMAYG-MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 558

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV-SWNSMI-SGYIHNEL 541
             Y V   +     ++   G+ G + +  ++   M    ++  +W+S++ +  IHN L
Sbjct: 559 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNL 616



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 204/399 (51%), Gaps = 30/399 (7%)

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD-VSVSNALLSLYADAGYLSR 410
           G+   N++  + L + A L  + LG+QIH    K G   D V+V+N L++LY   G    
Sbjct: 5   GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEA--LVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
             KVF  + E +QVSWNS+I +    E   +  EA +  LD       P+  T ++++ A
Sbjct: 65  VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD---ENVEPSSFTLVSVVTA 121

Query: 469 ASSFSMGK---LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
            S+  M +   +G QVHA  ++    N   I N L++ YGK G++   + +       RD
Sbjct: 122 CSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGG-RD 179

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
            V+WN+++S    NE L +A+  +  M+  G   D FT ++VL AC+ +  L  G E+HA
Sbjct: 180 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 239

Query: 586 CGVR-ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGD 644
             ++   L+ +  +GSALVDMY  C ++    R FD M  R +  WN+MI+GY+++ H  
Sbjct: 240 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 299

Query: 645 KALTLFSQMKLD-GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ----LE 699
           +AL LF  M+   G L +  T  GV+ AC  +G        F     ++G + +     +
Sbjct: 300 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGA-------FSRKEAIHGFVVKRGLDRD 352

Query: 700 QF--SCMVDLLGRAGELDKIEEFINKMP----ITPNSLI 732
           +F  + ++D+  R G++D       KM     +T N++I
Sbjct: 353 RFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMI 391



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 227/496 (45%), Gaps = 51/496 (10%)

Query: 2   KDAKLFHLQILKHG-FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +  K  H   LK+G    + F+ + L+++Y     + S  ++FD M DR    W  +++G
Sbjct: 232 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG 291

Query: 61  YTHKGMSNEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           Y+      EA  +F  M   AG L N   +  V+ AC   G   F     +H  V+K   
Sbjct: 292 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG--AFSRKEAIHGFVVKRGL 349

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY---SQRGDTISVFK 176
             D  V N L+ MY S L   D A RIF ++E RDL++WN++I+ Y       D + +  
Sbjct: 350 DRDRFVQNTLMDMY-SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLH 408

Query: 177 LFSRMQRE----GFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSD 230
               ++R+      R SLKPN  T  +++   AA S++  G    ++I A   K  L +D
Sbjct: 409 KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG----KEIHAYAIKNNLATD 464

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGL 287
           + VGSALV  +A+ G    +RK+F+Q+ QKNV++ N ++        G+E    L+R  +
Sbjct: 465 VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID-LLRMMM 523

Query: 288 FDMVAVGN-GLVNMYAKC---GTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCY 338
              V       ++++A C   G +D+   +F  M     +   S  +  ++  L + G  
Sbjct: 524 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRI 583

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           +EA      M RD   +  +S  S L +      + +G +I  + L + L+ +V+    L
Sbjct: 584 KEAYQLMNMMPRDFNKAGAWS--SLLGASRIHNNLEIG-EIAAQNL-IQLEPNVASHYVL 639

Query: 399 LS-LYADAGYLSRCLKVFFLMPEH-----DQVSW---NSVIGAF--ADSEALVSEAVKYY 447
           L+ +Y+ AG   +  +V   M E         SW      +  F   DS    SE +  Y
Sbjct: 640 LANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGY 699

Query: 448 LD-----MRRAGWSPN 458
           L+     MR+ G+ P+
Sbjct: 700 LETLWERMRKEGYVPD 715


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 276/718 (38%), Positives = 420/718 (58%), Gaps = 22/718 (3%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQM-----IQKNVVSMNGLMEGRRK---GKEVHGY 281
           D+Y  + ++SG+ R G      + F        +Q +  +   +++  R    G ++H  
Sbjct: 116 DVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTDGNKIHCL 175

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
            ++ G    V V   L+++Y + G + ++R +F  M  +D  SWN MISG  Q+G  +EA
Sbjct: 176 ALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEA 235

Query: 342 IMNFCAMRRDGLMS-SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           +        DGL +  + +++S LS+C   G    G  IH   +K GL+S++ VSN L+ 
Sbjct: 236 LT-----LSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLID 290

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           LYA+ G L  C KVF  M   D +SWNS+I A+  +E  +  A+  + +MR +   P+ +
Sbjct: 291 LYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPL-RAILLFQEMRLSRIQPDCL 349

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYN-VANETTIENALLSCYGKCGEMDDCEKIFAR 519
           T I++ +  S     +    V    ++      + TI NA++  Y K G +D    +F  
Sbjct: 350 TLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL--DHFTFATVLSACASVATL 577
           +  + D +SWN++ISGY  N    +A+ +   M + G  +  +  T+ +VL AC+    L
Sbjct: 410 LPNK-DVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGAL 468

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
            +GM++H   ++  L  DV +G++L DMY KCGR+D A   F  +P  N   WN++I+ +
Sbjct: 469 RQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACH 528

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
             HGHG+KA+ LF +M  +G  PDH+TFV +LSACSH+GLVDEG   F+ M   YG+ P 
Sbjct: 529 GFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPS 588

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
           L+ + CMVDL GRAG+L+    FI  MP+ P++ IW  +L A CR +    +LG+ A+  
Sbjct: 589 LKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSA-CRVH-GNVDLGKIASEH 646

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           LFE+EP++   +VLL+NMYAS GKWE V + R       ++K  G S + + + V VF  
Sbjct: 647 LFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYT 706

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL 877
           G+++HP  + +Y +L  L++K++  GYVP  +F L D+E + KE ++  HSE++A+AF L
Sbjct: 707 GNQTHPMYEEMYRELTALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFAL 766

Query: 878 -TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            T  +K  IRI KNLRVCGDCHS  KFISKI  REI++RDSNRFHHF +G CSCGDYW
Sbjct: 767 ITTPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 158/589 (26%), Positives = 274/589 (46%), Gaps = 81/589 (13%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           + AK  H +++      +V +   L+N+Y  +G++A A   FD + +R+  +W  ++SGY
Sbjct: 68  QSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGY 127

Query: 62  THKGMSNEACKMFKE-MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
              G S+E  + F   M+ +G   +     SVL+AC+         G ++HCL LK    
Sbjct: 128 GRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD-----GNKIHCLALKFGFM 182

Query: 121 FDGLVSNVLIAM---YGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
           +D  V+  LI +   YG+ +     AR +F+E+ TRD+ SWN++IS Y Q G+      L
Sbjct: 183 WDVYVAASLIHLYCRYGAVVN----ARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTL 238

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSS------VLSGSYLLQQILAMVKKAGLLSDL 231
                 +G R     +  T  SL++A   +      V   SY +        K GL S+L
Sbjct: 239 -----SDGLR---AMDSVTVVSLLSACTEAGDFNRGVTIHSYSI--------KHGLESEL 282

Query: 232 YVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------- 272
           +V + L+  +A  G+    +K+F++M  ++++S N +++                     
Sbjct: 283 FVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLS 342

Query: 273 ----------------------RKGKEVHGYLIRSGLF-DMVAVGNGLVNMYAKCGTIDD 309
                                 R  + V G+ +R G F + + +GN +V MYAK G +D 
Sbjct: 343 RIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 402

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG--LMSSNFSLISTLSSC 367
           +R+VF ++  KD +SWNT+ISG  QNG   EAI  +  M  +G  + ++  + +S L +C
Sbjct: 403 ARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPAC 462

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
           +  G +  G ++HG  LK GL  DV V  +L  +Y   G L   L +F+ +P  + V WN
Sbjct: 463 SQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWN 522

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-I 486
           ++I           +AV  + +M   G  P+ +TF+ +L+A S   +   G      +  
Sbjct: 523 TLIACHG-FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQT 581

Query: 487 KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
            Y +         ++  YG+ G+++        M  + D   W +++S 
Sbjct: 582 DYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSA 630



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 157/525 (29%), Positives = 254/525 (48%), Gaps = 33/525 (6%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           +  K +H  L+ S     V +   LVN+Y   G +  +R  F  +  +D  +WN MISG 
Sbjct: 68  QSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGY 127

Query: 333 DQNGCYEEAIMNFCA-MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
            + G   E I  F   M   GL     +  S L +C +   +  G +IH   LK G   D
Sbjct: 128 GRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN---VTDGNKIHCLALKFGFMWD 184

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           V V+ +L+ LY   G +     +F  MP  D  SWN++I  +  S     EA+     +R
Sbjct: 185 VYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQS-GNAKEALTLSDGLR 243

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
               + + VT +++L+A +       G  +H+  IK+ + +E  + N L+  Y + G + 
Sbjct: 244 ----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLK 299

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
           DC+K+F RM   RD +SWNS+I  Y  NE   +A+ L   M     + D  T  ++ S  
Sbjct: 300 DCQKVFDRMY-VRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASIL 358

Query: 572 ASVATLERGMEVHACGVRA--CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           + +  +     V    +R    LE D+ IG+A+V MY+K G +D A   F+ +P ++V S
Sbjct: 359 SQLGEIRACRSVQGFTLRKGWFLE-DITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVIS 417

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGP--LPDHVTFVGVLSACSHAGLVDEGFK-HFK 686
           WN++ISGYA++G   +A+ +++ M+ +G     +  T+V VL ACS AG + +G K H +
Sbjct: 418 WNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGR 477

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
            +    GL   +   + + D+ G+ G LD       ++P   NS+ W T++ AC   +  
Sbjct: 478 LLKN--GLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRV-NSVPWNTLI-ACHGFHGH 533

Query: 747 KTELGRKAANMLFEM-----EPQNAVNYVLLANMYASG----GKW 782
               G KA  +  EM     +P +     LL+    SG    G+W
Sbjct: 534 ----GEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEW 574



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 149/329 (45%), Gaps = 23/329 (6%)

Query: 13  KHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACK 72
           K  F  D+ + N ++ +Y ++G + SA  +F+ +P+++ +SW  I+SGY   G ++EA +
Sbjct: 377 KGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIE 436

Query: 73  MFKEMVRAG--FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLI 130
           M+  M   G     N+    SVL AC + G    + GM++H  +LK+    D  V   L 
Sbjct: 437 MYNIMEEEGGEISANQGTWVSVLPACSQAG--ALRQGMKLHGRLLKNGLYLDVFVGTSLA 494

Query: 131 AMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSL 190
            MYG C    D A  +F +I   + + WN++I+ +   G       LF  M  EG    +
Sbjct: 495 DMYGKCGRLDD-ALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG----V 549

Query: 191 KPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
           KP+  TF +L++A   S L   G +  +    M    G+   L     +V  + R G   
Sbjct: 550 KPDHITFVTLLSACSHSGLVDEGEWCFEM---MQTDYGITPSLKHYGCMVDLYGRAGQLE 606

Query: 249 YARKIFEQMIQKNVVSMNG--LMEGRRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYA 302
            A    + M  +   S+ G  L   R  G    G +    LF++     G    L NMYA
Sbjct: 607 IALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYA 666

Query: 303 KCGT---IDDSRSVFRFMIGKDSVSWNTM 328
             G    +D+ RS+      + +  W++M
Sbjct: 667 SAGKWEGVDEIRSITSGKGLRKTPGWSSM 695


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 293/805 (36%), Positives = 439/805 (54%), Gaps = 67/805 (8%)

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD-LYVGSALVSGFARLGNFY 248
           +KP+ Y F +L+ A     L    L +QI A V K G   D + V + LV+ + + G+F 
Sbjct: 93  IKPDNYAFPALLKAVAD--LQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFG 150

Query: 249 YARKIFEQMIQKNVVSMNGLM--------------------------------------- 269
              K+F+++ ++N VS N L+                                       
Sbjct: 151 AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS 210

Query: 270 -----EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                EG   GK+VH Y +R G  +   + N LV MY K G +  S+ +     G+D V+
Sbjct: 211 NLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVT 269

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           WNT++S L QN    EA+     M  +G+    F++ S L +C+ L  +  G+++H   L
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329

Query: 385 KLG-LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           K G LD +  V +AL+ +Y +   +    +VF  M +     WN++I  ++ +E    EA
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH-DKEA 388

Query: 444 VKYYLDMRR-AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           +  ++ M   AG   N  T   ++ A            +H  V+K  +  +  ++N L+ 
Sbjct: 389 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 448

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE-------LLPKAMNLVWFMMQR 555
            Y + G++D   +IF +M E RD V+WN+MI+GY+ +E       LL K  NL   + + 
Sbjct: 449 MYSRLGKIDIAMRIFGKM-EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 507

Query: 556 GQRL----DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR 611
             R+    +  T  T+L +CA+++ L +G E+HA  ++  L  DV +GSALVDMY+KCG 
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 567

Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
           +  + + FD +P +NV +WN +I  Y  HG+G +A+ L   M + G  P+ VTF+ V +A
Sbjct: 568 LQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAA 627

Query: 672 CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
           CSH+G+VDEG + F  M   YG+ P  + ++C+VDLLGRAG + +  + +N MP   N  
Sbjct: 628 CSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKA 687

Query: 732 -IWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARK 790
             W ++LGA    N    E+G  AA  L ++EP  A +YVLLAN+Y+S G W+   + R+
Sbjct: 688 GAWSSLLGASRIHN--NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRR 745

Query: 791 AMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKF 850
            MKE  V+KE GCSW+   D VH FVAGD SHP+ + +   L+ L ++MR  GYVP T  
Sbjct: 746 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSC 805

Query: 851 ALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVG 909
            L ++E + KE L+  HSEK+A+AF +L  +    IR+ KNLRVC DCH A KFISKIV 
Sbjct: 806 VLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVD 865

Query: 910 REIVLRDSNRFHHFNDGKCSCGDYW 934
           REI+LRD  RFH F +G CSCGDYW
Sbjct: 866 REIILRDVRRFHRFKNGTCSCGDYW 890



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 157/596 (26%), Positives = 274/596 (45%), Gaps = 68/596 (11%)

Query: 5   KLFHLQILKHGFAYD-VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           K  H  + K G+  D V + NTL+N+Y + GD  +  K+FD + +RN VSW  ++S    
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 176

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG-PSGFKFGMQVHCLVLKSNQTFD 122
                 A + F+ M+      + + L SV+ AC     P G   G QVH   L+  +  +
Sbjct: 177 FEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE-LN 235

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             + N L+AMYG  L     ++ +      RDL++WN+++S   Q    +   +    M 
Sbjct: 236 SFIINTLVAMYGK-LGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD-LYVGSALVSGF 241
            EG    ++P+E+T  S++ A   S L      +++ A   K G L +  +VGSALV  +
Sbjct: 295 LEG----VEPDEFTISSVLPAC--SHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 348

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE------------------------ 277
                    R++F+ M  + +   N ++ G  + +                         
Sbjct: 349 CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 408

Query: 278 ------------------VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                             +HG++++ GL     V N L++MY++ G ID +  +F  M  
Sbjct: 409 AGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED 468

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMR-----------RDGLMSSNFSLISTLSSCA 368
           +D V+WNTMI+G   +  +E+A++    M+           R  L  ++ +L++ L SCA
Sbjct: 469 RDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA 528

Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
           +L  +  G++IH   +K  L +DV+V +AL+ +YA  G L    KVF  +P+ + ++WN 
Sbjct: 529 ALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNV 588

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV-HAQVIK 487
           +I A+        EA+     M   G  PN VTFI++ AA S   M   G ++ +     
Sbjct: 589 IIMAYG-MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPD 647

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV-SWNSMI-SGYIHNEL 541
           Y V   +     ++   G+ G + +  ++   M    ++  +W+S++ +  IHN L
Sbjct: 648 YGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNL 703



 Score =  179 bits (453), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 215/426 (50%), Gaps = 30/426 (7%)

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W  ++    ++    EA++ +  M   G+   N++  + L + A L  + LG+QIH    
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 385 KLGLDSD-VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA--LVS 441
           K G   D V+V+N L++LY   G      KVF  + E +QVSWNS+I +    E   +  
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK---LGHQVHAQVIKYNVANETTIEN 498
           EA +  LD       P+  T ++++ A S+  M +   +G QVHA  ++    N   I N
Sbjct: 185 EAFRCMLD---ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-N 240

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
            L++ YGK G++   + +       RD V+WN+++S    NE L +A+  +  M+  G  
Sbjct: 241 TLVAMYGKLGKLASSKVLLGSFGG-RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVR-ACLEFDVVIGSALVDMYSKCGRIDYASR 617
            D FT ++VL AC+ +  L  G E+HA  ++   L+ +  +GSALVDMY  C ++    R
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD-GPLPDHVTFVGVLSACSHAG 676
            FD M  R +  WN+MI+GY+++ H  +AL LF  M+   G L +  T  GV+ AC  +G
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419

Query: 677 LVDEGFKHFKSMSQVYGLIPQ----LEQF--SCMVDLLGRAGELDKIEEFINKMP----I 726
                   F     ++G + +     ++F  + ++D+  R G++D       KM     +
Sbjct: 420 A-------FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 472

Query: 727 TPNSLI 732
           T N++I
Sbjct: 473 TWNTMI 478



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 227/496 (45%), Gaps = 51/496 (10%)

Query: 2   KDAKLFHLQILKHG-FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +  K  H   LK+G    + F+ + L+++Y     + S  ++FD M DR    W  +++G
Sbjct: 319 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG 378

Query: 61  YTHKGMSNEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           Y+      EA  +F  M   AG L N   +  V+ AC   G   F     +H  V+K   
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG--AFSRKEAIHGFVVKRGL 436

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY---SQRGDTISVFK 176
             D  V N L+ MY S L   D A RIF ++E RDL++WN++I+ Y       D + +  
Sbjct: 437 DRDRFVQNTLMDMY-SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLH 495

Query: 177 LFSRMQRE----GFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSD 230
               ++R+      R SLKPN  T  +++   AA S++  G    ++I A   K  L +D
Sbjct: 496 KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG----KEIHAYAIKNNLATD 551

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGL 287
           + VGSALV  +A+ G    +RK+F+Q+ QKNV++ N ++        G+E    L+R  +
Sbjct: 552 VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID-LLRMMM 610

Query: 288 FDMVAVGN-GLVNMYAKC---GTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCY 338
              V       ++++A C   G +D+   +F  M     +   S  +  ++  L + G  
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRI 670

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           +EA      M RD   +  +S  S L +      + +G +I  + L + L+ +V+    L
Sbjct: 671 KEAYQLMNMMPRDFNKAGAWS--SLLGASRIHNNLEIG-EIAAQNL-IQLEPNVASHYVL 726

Query: 399 LS-LYADAGYLSRCLKVFFLMPEH-----DQVSW---NSVIGAF--ADSEALVSEAVKYY 447
           L+ +Y+ AG   +  +V   M E         SW      +  F   DS    SE +  Y
Sbjct: 727 LANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGY 786

Query: 448 LD-----MRRAGWSPN 458
           L+     MR+ G+ P+
Sbjct: 787 LETLWERMRKEGYVPD 802


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 300/889 (33%), Positives = 484/889 (54%), Gaps = 51/889 (5%)

Query: 82  FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-TFDGLVSNVLIAMYGSCLEST 140
           FLL R ALG +L+A  +      + G ++H LV  S +   D ++   +I MY  C  S 
Sbjct: 80  FLLVREALGLLLQASGK--RKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMC-GSP 136

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
           D +R  F+ + +++L  WN++IS YS+      V ++F +M     +  L P+ +TF  +
Sbjct: 137 DDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMIS---KTHLLPDNFTFPCV 193

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
           I A     +S   +   +  +V K GL+ DL+VG+ALVS +   G    A K+F+ M ++
Sbjct: 194 IKACAG--ISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPER 251

Query: 261 NVVSMNGLME-------------------------GRRK----GKEVHGYLIRSGLFDMV 291
           N+VS N ++                           R +    GK VHG+ ++  L   +
Sbjct: 252 NLVSWNSMIRVFSDNGDDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKEL 311

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR- 350
            V N L++MY+K G I DS+ +F+    K+ VSWNTM+ G    G   +    F  +R+ 
Sbjct: 312 VVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEG---DIHGTFDLLRQM 368

Query: 351 ----DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
               + + +   ++++ +  C     +   +++H   LK     D  ++NA ++ YA  G
Sbjct: 369 LAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCG 428

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
            LS   +VF  +      SWN++IG +A S      ++  +L M+ +G  P+  T  ++L
Sbjct: 429 SLSYAQRVFHGIRSKTLNSWNALIGGYAQSSD-PRLSLDAHLQMKNSGLLPDNFTVCSLL 487

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           +A S     +LG +VH  +I+  +  +  +  ++LS Y  CGE+   + +F  M E    
Sbjct: 488 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAM-EDNSL 546

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           VSWN++I+G++ N    +A+ L   M+  G +    +  TV  AC+ + +L  G E HA 
Sbjct: 547 VSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAY 606

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            ++  LE +  I  +++DMY+K G I  +S+ F+ +  ++  SWN+MI GY  HG   +A
Sbjct: 607 ALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEA 666

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           + LF +M+  G  PD +TF+GVL+AC+H+GL+ EG ++   M   +GL P L+ ++C++D
Sbjct: 667 IKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVID 726

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           +LGRAG+LD       +M   P+  IW ++L + CR + +  E+G K A  LF +EP+  
Sbjct: 727 MLGRAGQLDNALRVAAEMSEEPDVGIWNSLL-SWCRIH-QNLEMGEKVAAKLFVLEPEKP 784

Query: 767 VNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKD 826
            NYVLL+N+YA  GKW+DV + R+ MKE  ++K+AGCSW+ +   V  FV G+      +
Sbjct: 785 ENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFE 844

Query: 827 LIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPI 885
            I      L  K+   GY P T     DL  E K + +  HSEK+A+ + L + S+   +
Sbjct: 845 EIKSLWSILEMKIWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTL 904

Query: 886 RIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           R+ KNLR+C DCH+A K ISK++ REIV+RD+ RFHHFN G CSCGDYW
Sbjct: 905 RVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFNKGFCSCGDYW 953



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 178/681 (26%), Positives = 304/681 (44%), Gaps = 77/681 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K+ HL         D  LC  +I +Y   G    +   FD +  +N   W  ++S Y+  
Sbjct: 105 KIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRN 164

Query: 65  GMSNEACKMFKEMVRAGFLL-NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            + +E  +MF +M+    LL + +    V++AC   G S    G+ VH LV+K+    D 
Sbjct: 165 ELYHEVLEMFIKMISKTHLLPDNFTFPCVIKAC--AGISDVGIGLAVHGLVVKTGLVEDL 222

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V N L++ YG+    +D A ++F+ +  R+L+SWNS+I V+S  GD             
Sbjct: 223 FVGNALVSFYGTHGFVSD-ALKLFDIMPERNLVSWNSMIRVFSDNGD------------- 268

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           +G   +  P+  T  +++         G  + + +     K  L  +L V +AL+  +++
Sbjct: 269 DG---AFMPDVATVVTVLPVCAREREIG--VGKGVHGWAVKLSLDKELVVNNALMDMYSK 323

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLM-----EGRRKG----------------------- 275
            G    ++ IF+    KNVVS N ++     EG   G                       
Sbjct: 324 WGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTIL 383

Query: 276 ---------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                          KE+H Y ++        + N  V  YAKCG++  ++ VF  +  K
Sbjct: 384 NAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSK 443

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
              SWN +I G  Q+     ++     M+  GL+  NF++ S LS+C+ L  + LG+++H
Sbjct: 444 TLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVH 503

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
           G  ++  L+ D+ V  ++LSLY   G L     +F  M ++  VSWN+VI     +    
Sbjct: 504 GFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQN-GFP 562

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
             A+  +  M   G  P G++ + +  A S     +LG + HA  +K+ + +   I  ++
Sbjct: 563 ERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSI 622

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD 560
           +  Y K G +    K+F  + E +   SWN+MI GY  +    +A+ L   M + G+  D
Sbjct: 623 IDMYAKNGAITQSSKVFNGLKE-KSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPD 681

Query: 561 HFTFATVLSACASVATLERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
             TF  VL+AC     L  G+        + G++  L+    +    +DM  + G++D A
Sbjct: 682 DLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACV----IDMLGRAGQLDNA 737

Query: 616 SRFFDLMPVR-NVYSWNSMIS 635
            R    M    +V  WNS++S
Sbjct: 738 LRVAAEMSEEPDVGIWNSLLS 758



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 148/325 (45%), Gaps = 24/325 (7%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  I+++    D+F+  +++++Y+  G+L +   LFD M D + VSW  +++G+  
Sbjct: 499 GKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQ 558

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G    A  +F++MV  G      ++ +V  AC    PS  + G + H   LK     + 
Sbjct: 559 NGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLL-PS-LRLGREAHAYALKHLLEDNA 616

Query: 124 LVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            ++  +I MY   G+  +S+    ++F  ++ +   SWN++I  Y   G      KLF  
Sbjct: 617 FIACSIIDMYAKNGAITQSS----KVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEE 672

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           MQR G      P++ TF  ++TA   S L   G   L Q   M    GL  +L   + ++
Sbjct: 673 MQRTG----RNPDDLTFLGVLTACNHSGLLHEGLRYLDQ---MKSSFGLKPNLKHYACVI 725

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSM-NGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG 296
               R G    A ++  +M ++  V + N L+   R  + +  G  + + LF +      
Sbjct: 726 DMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPE 785

Query: 297 ----LVNMYAKCGTIDDSRSVFRFM 317
               L N+YA  G  DD R V + M
Sbjct: 786 NYVLLSNLYAGLGKWDDVRQVRQRM 810


>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 312/974 (32%), Positives = 506/974 (51%), Gaps = 60/974 (6%)

Query: 3    DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
            + K  H  +    F  D++L N LI++Y + G +  A+ +F  M D++ VSW  ++SGY 
Sbjct: 118  EGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYA 177

Query: 63   HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
              G   EA  +F +M R G   N+    S+L ACQ   P   +FG Q+H  + K+    D
Sbjct: 178  LHGRDQEAADLFYQMQREGLKPNQNTFISILSACQ--SPIALEFGEQIHSRIAKAGYESD 235

Query: 123  GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
              VS  LI MY  C  S + AR++F E+  R+++SW ++IS Y Q GD+     LF ++ 
Sbjct: 236  VNVSTALINMYCKC-GSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLI 294

Query: 183  REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            R G    ++PN+ +F S++ A  +    G  L  ++ A +K+AGL  ++ VG+AL+S ++
Sbjct: 295  RSG----IQPNKVSFASILGACTNPNDLGEGL--KLHAYIKQAGLEQEVLVGNALISMYS 348

Query: 243  RLGNFYYARKIFEQMIQKNVVSMN--------GLMEGR---------------------- 272
            R G+   AR++F+ +   N  + N        GLME                        
Sbjct: 349  RCGSLANARQVFDNLRSLNRTTWNAMIAGYGEGLMEEAFRLFRAMEQKGFQPDKFTYASL 408

Query: 273  ----------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                       +GKE+H  +  +G    + V   L++MYAKCG+ +++R VF  M  ++ 
Sbjct: 409  LAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNV 468

Query: 323  VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
            +SWN  IS   ++   +EA   F  MRRD +   + + I+ L+SC S   +  G+ IHG+
Sbjct: 469  ISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGK 528

Query: 383  GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
              + G+ S+  V+NAL+S+Y   G L+   +VF+ +   D  SWN++I A     A  S 
Sbjct: 529  INQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGS- 587

Query: 443  AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
            A   +   R  G   +  TFIN+L A ++      G  +H  V K     +  +   L+ 
Sbjct: 588  AFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIK 647

Query: 503  CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
             Y KCG + D E +F+ + E+ D V WN+M++ Y H++    A+ L   M   G   D  
Sbjct: 648  MYSKCGSLRDAENVFSTVQEK-DVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSS 706

Query: 563  TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
            T++T L+ACA +  +E G ++HA    A +E D  + ++L++MYS+CG +  A + F+ M
Sbjct: 707  TYSTALNACARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKM 766

Query: 623  PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
              R++ SWN++I+GY ++G G+ AL  +  M     +P+  TF  +LS+ +  G  ++ F
Sbjct: 767  LSRDINSWNALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSILSSYAQLGEEEQAF 826

Query: 683  KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
               +S+ + + + P  + ++ MV  LGRAG L + EEFI ++     +L+W ++L A CR
Sbjct: 827  DFLESIKKEWNMEPSEQHYAYMVAALGRAGLLKEAEEFIEEISAESAALMWESLLVA-CR 885

Query: 743  ANCRKTELGRKAANMLFEMEPQNAVNYV-LLANMYASGGKWEDVAKARKAMKEAEVKKEA 801
             +    EL   A   L + + Q +      L ++YA+ G+WEDV+  +  M+EA +    
Sbjct: 886  IHL-NVELAETAVEHLLDAKAQASPAVCEQLMSIYAAAGRWEDVSVLKTTMQEAGLVALK 944

Query: 802  GCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKE 861
             C+ + +    H F+A   S P+   +  K++EL +KM D G+    ++A  D     KE
Sbjct: 945  SCT-IEVNSEFHNFIANHLS-PQIG-VQCKIEELVRKMTDRGFSLDPQYASND--SREKE 999

Query: 862  DLVSYHSEKIAVAFVLTRN-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRF 920
             L     E +AVA+ L    S + IR + + RV    H   KFIS+   R I++RD N F
Sbjct: 1000 CLFFQCPELLAVAYGLEHTASGVSIRCVTDSRVTDPSHEMLKFISRAYDRGILVRDPNCF 1059

Query: 921  HHFNDGKCSCGDYW 934
            H F DG CSCGDYW
Sbjct: 1060 HIFEDGICSCGDYW 1073



 Score =  282 bits (721), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 159/477 (33%), Positives = 268/477 (56%), Gaps = 14/477 (2%)

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
           +YAR++ + ++ K++           +GK+VH ++  +     + + N L++MY+KCG+I
Sbjct: 102 FYARRLQQCVLAKSLA----------EGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSI 151

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
           +D+ +VF+ M  KD VSWN MISG   +G  +EA   F  M+R+GL  +  + IS LS+C
Sbjct: 152 EDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSAC 211

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
            S   +  G+QIH    K G +SDV+VS AL+++Y   G L    KVF  M E + VSW 
Sbjct: 212 QSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWT 271

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           ++I  +        EA+  +  + R+G  PN V+F +IL A ++ +    G ++HA + +
Sbjct: 272 AMISGYV-QHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQ 330

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
             +  E  + NAL+S Y +CG + +  ++F  +    +  +WN+MI+GY    L+ +A  
Sbjct: 331 AGLEQEVLVGNALISMYSRCGSLANARQVFDNL-RSLNRTTWNAMIAGYGEG-LMEEAFR 388

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
           L   M Q+G + D FT+A++L+ CA  A L+RG E+H+       + D+ + +AL+ MY+
Sbjct: 389 LFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYA 448

Query: 608 KCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVG 667
           KCG  + A + F+ MP RNV SWN+ IS   RH  G +A   F QM+ D   PDH+TF+ 
Sbjct: 449 KCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFIT 508

Query: 668 VLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           +L++C+    ++ G ++       +G++      + ++ + GR G L    E   ++
Sbjct: 509 LLNSCTSPEDLERG-RYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRI 564



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 35/230 (15%)

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
           V  + +RG + +   +A  L  C    +L  G +VH     A  + D+ + + L+ MYSK
Sbjct: 88  VQLLGKRGVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSK 147

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
           CG I+ A+  F  M  ++V SWN+MISGYA HG   +A  LF QM+ +G  P+  TF+ +
Sbjct: 148 CGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISI 207

Query: 669 LSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP--- 725
           LSAC     ++ G +    +++  G    +   + ++++  + G L+   +  N+M    
Sbjct: 208 LSACQSPIALEFGEQIHSRIAKA-GYESDVNVSTALINMYCKCGSLELARKVFNEMRERN 266

Query: 726 -------------------------------ITPNSLIWRTVLGACCRAN 744
                                          I PN + + ++LGAC   N
Sbjct: 267 VVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPN 316


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 292/838 (34%), Positives = 450/838 (53%), Gaps = 55/838 (6%)

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
           L ST C    F         + N+ I+ + + GD  +  +L ++ +     Y L  N Y 
Sbjct: 43  LHSTVCVSPSFTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKS----YELGLNSYC 98

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
               + A   S+  G    +++ +++   G+  D  +G+ LV  +   G+    RKIF++
Sbjct: 99  SVLQLCAEKKSLEDG----KRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDK 154

Query: 257 MIQKNVVSMNGLME----------------------------------------GR-RKG 275
           ++   V   N LM                                         G+ ++ 
Sbjct: 155 IMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKEC 214

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           K VHGY+++ G     AV N L+  Y K G ++ + ++F  +   D VSWN+MI+G   N
Sbjct: 215 KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVN 274

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G     +  F  M   G+     +L+S L +CA++G + LG+ +HG G+K     +V  S
Sbjct: 275 GFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFS 334

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           N LL +Y+  G L+   +VF  M +   VSW S+I A+   E L S+A+  + +M+  G 
Sbjct: 335 NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYV-REGLYSDAIGLFDEMQSKGV 393

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            P+  T  +I+ A +  S    G  VH+ VIK  + +   + NAL++ Y KCG +++   
Sbjct: 394 RPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARL 453

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F+++   +D VSWN+MI GY  N LLP     ++  MQ+  + D  T A VL ACA +A
Sbjct: 454 VFSKIP-VKDIVSWNTMIGGYSQN-LLPNEALELFLDMQKQFKPDDITMACVLPACAGLA 511

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            L++G E+H   +R     D+ +  ALVDMY+KCG +  A   FD++P +++ SW  MI+
Sbjct: 512 ALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIA 571

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
           GY  HG G++A++ F++M++ G  PD  +F  +L+ACSH+GL++EG+K F SM    G+ 
Sbjct: 572 GYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVE 631

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           P+LE ++C+VDLL R G L K  +FI  MPI P++ IW  +L   CR +    +L  K A
Sbjct: 632 PKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSG-CRIH-HDVKLAEKVA 689

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
             +FE+EP N   YV+LAN+YA   KWE+V K RK M++   K+  GCSW+ +    ++F
Sbjct: 690 EHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIF 749

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
           VAG+  HP+   I   L +L  +M++  Y    ++ L + +   KE +   HSEK A+AF
Sbjct: 750 VAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAF 809

Query: 876 -VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
            +L       +R+ KN RVCGDCH   KF+SK    EIVLRDSNRFHHF DG CSC D
Sbjct: 810 GILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 159/589 (26%), Positives = 268/589 (45%), Gaps = 66/589 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +D K  H  I+ +G + D  L   L+ +YV  GDL    K+FD++ +     W  ++S Y
Sbjct: 111 EDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEY 170

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   E+  +FK+M + G + N Y    VL+     G    K   +VH  VLK     
Sbjct: 171 AKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGK--VKECKRVHGYVLKLGFGS 228

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V N LIA Y       + A  +F+E+   D++SWNS+I+     G + +  ++F +M
Sbjct: 229 NTAVVNSLIAAYFK-FGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQM 287

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQIL-AMVKKAGLLSDLYVGSALVSG 240
              G        E    +L++   +    G+  L + L     KA    ++   + L+  
Sbjct: 288 LILGV-------EVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDM 340

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLM---------------------EGRR------ 273
           +++ GN   A ++F +M    +VS   ++                     +G R      
Sbjct: 341 YSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTV 400

Query: 274 --------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                         KG++VH Y+I++G+   + V N L+NMYAKCG+++++R VF  +  
Sbjct: 401 TSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV 460

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           KD VSWNTMI G  QN    EA+  F  M++      + ++   L +CA L  +  G++I
Sbjct: 461 KDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREI 519

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           HG  L+ G  SD+ V+ AL+ +YA  G L     +F ++P+ D +SW  +I  +      
Sbjct: 520 HGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYG-MHGF 578

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
            +EA+  + +MR AG  P+  +F  IL A S   +   G +        ++ NE  +E  
Sbjct: 579 GNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFN-----SMRNECGVEPK 633

Query: 500 L------LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
           L      +    + G +    K    M  + D   W  ++SG  IH+++
Sbjct: 634 LEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDV 682


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 266/665 (40%), Positives = 412/665 (61%), Gaps = 6/665 (0%)

Query: 273 RKGKEVHGYLIRSGLFDMVA-VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
           R+G+ +H  L+ SG       + N L+ MY+ C  +  +  +F  M  +++VSW T++SG
Sbjct: 37  RRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSG 96

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
           L QN  + +A+  F AMRR G+  + F+L S   + A+LG  + G Q+H  G++LG D++
Sbjct: 97  LSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTE 156

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           + V++ L  +Y+  G LS   +VF  MP+ D V+W ++I  +A + +L   AV  + DM+
Sbjct: 157 LFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSL-EAAVLSFRDMK 215

Query: 452 RAGW-SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
           R G    +   F ++L+A+     G L   +H  V K     E  + NAL+  Y K  ++
Sbjct: 216 REGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDV 275

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
           +   ++        + VS  SMI GYI  + + +A+ +   + ++G   + FTF++++  
Sbjct: 276 ESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKG 335

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
           CA  A LE+G ++HA  ++  L  D  +GS LVDMY KCG I  + + F+ +  R   +W
Sbjct: 336 CAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAW 395

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           N++I+ +A+HGHG +A+  F +M   G  P+H+ FV +L+ACSHAGLVDEG K+F SM +
Sbjct: 396 NAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKE 455

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
            +G+ P+ E +SC++D  GRAG LD+  +FI++MPI PN+  W ++LGA CR    K EL
Sbjct: 456 AHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGA-CRMRGSK-EL 513

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
           G  AA  L ++EP N   +V L+ +YAS G+WEDV   RK M+++ +KK  G SWV    
Sbjct: 514 GEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNK 573

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
             HVF + D SHP++  IYEKL+EL  ++++ GY+P T F   +LE  +KE ++ YHSE+
Sbjct: 574 KTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSER 633

Query: 871 IAVAFVL-TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           IAVAF L +  +  PI + KNLR+C DCH+AFKFI K+  R+I++RD++RFHHF +G+CS
Sbjct: 634 IAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCS 693

Query: 930 CGDYW 934
           CGDYW
Sbjct: 694 CGDYW 698



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 222/484 (45%), Gaps = 69/484 (14%)

Query: 2   KDAKLFHLQILKHGFAY-DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +  +L H +++  G A    FL N LI +Y    DLASA +LF  MP RN+VSW  +VSG
Sbjct: 37  RRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSG 96

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
            +   M  +A   F  M RAG    R+AL S  RA           G Q+HC+ ++    
Sbjct: 97  LSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAA--LGAPLPGAQLHCVGVRLGFD 154

Query: 121 FDGLVSNVLIAMYGSC-LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
            +  V++ L  MY  C L S  C  R+F+++  +D ++W ++I  Y++ G   +    F 
Sbjct: 155 TELFVASNLADMYSKCGLLSEAC--RVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFR 212

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            M+REG    +  +++ F S+++A  S  L   +L + I   V KAG   ++ V +AL+ 
Sbjct: 213 DMKREGL---VGADQHVFCSVLSA--SGGLKDGWLSKSIHCCVTKAGFELEVAVRNALID 267

Query: 240 GFARLGNFYYARKIFE------------------------------------QMIQKNVV 263
            +A+  +   A ++ +                                    Q ++ N  
Sbjct: 268 MYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEF 327

Query: 264 SMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
           + + +++G        +G ++H  +I++ L     VG+ LV+MY KCG I  S  +F  +
Sbjct: 328 TFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEI 387

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             +  ++WN +I+   Q+G   EAI  F  M   G+  ++ + +S L++C+  G +    
Sbjct: 388 EYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLV---- 443

Query: 378 QIHGEGLKL--------GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNS 428
               EGLK         G++      + ++  Y  AG L    K    MP + +   W S
Sbjct: 444 ---DEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCS 500

Query: 429 VIGA 432
           ++GA
Sbjct: 501 LLGA 504



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 215/483 (44%), Gaps = 54/483 (11%)

Query: 97  QECGPSG-FKFGMQVHC-LVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRD 154
           Q CG +G  + G  +H  LVL         ++N LI MY  C +    A R+F  +  R+
Sbjct: 28  QSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLAS-ALRLFAAMPRRN 86

Query: 155 LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL 214
            +SW +++S  SQ          F+ M+R G    + P    F     A  ++ L     
Sbjct: 87  AVSWTTLVSGLSQNLMHADALAAFAAMRRAG----VAPTR--FALSSAARAAAALGAPLP 140

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--- 271
             Q+  +  + G  ++L+V S L   +++ G    A ++F+QM QK+ V+   +++G   
Sbjct: 141 GAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAK 200

Query: 272 --------------RRKG-------------------------KEVHGYLIRSGLFDMVA 292
                         +R+G                         K +H  + ++G    VA
Sbjct: 201 NGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVA 260

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGK-DSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           V N L++MYAK   ++ +  V +   G  + VS  +MI G  +  C EEA++ +  +RR 
Sbjct: 261 VRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQ 320

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G+  + F+  S +  CA    +  G Q+H + +K  L  D  V + L+ +Y   G +S  
Sbjct: 321 GVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLS 380

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
           +++F  +     ++WN+VI  FA       EA++ +  M  +G  PN + F+++L A S 
Sbjct: 381 MQLFNEIEYRTDIAWNAVINVFA-QHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSH 439

Query: 472 FSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
             +   G +  ++    + +  +    + ++  YG+ G +D+  K  + M  + +   W 
Sbjct: 440 AGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWC 499

Query: 531 SMI 533
           S++
Sbjct: 500 SLL 502



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 147/321 (45%), Gaps = 15/321 (4%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR-NSVSWACIVSGYT 62
           +K  H  + K GF  +V + N LI++Y +  D+ SAS++    P   N VS   ++ GY 
Sbjct: 243 SKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYI 302

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                 EA  ++ E+ R G   N +   S+++ C     +  + G Q+H  V+K++   D
Sbjct: 303 ETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAM--QALLEQGAQLHAQVIKTDLIRD 360

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V + L+ MYG C      + ++F EIE R  I+WN++I+V++Q G      + F RM 
Sbjct: 361 SFVGSTLVDMYGKC-GLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMI 419

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             G R    PN   F SL+TA   + L     L+   +M +  G+       S ++  + 
Sbjct: 420 YSGIR----PNHIAFVSLLTACSHAGLVDEG-LKYFYSMKEAHGIEPKEEHYSCIIDTYG 474

Query: 243 RLGNFYYARKIFEQM-IQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG---- 296
           R G    A K   +M I+ N      L+   R +G +  G +    L  +     G    
Sbjct: 475 RAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVS 534

Query: 297 LVNMYAKCGTIDDSRSVFRFM 317
           L  +YA  G  +D ++V + M
Sbjct: 535 LSGIYASLGQWEDVKAVRKLM 555



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 7/81 (8%)

Query: 564 FATVLSACASVATLERGMEVHA----CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
            A++L +C     L RG  +HA     G  A   F   + + L+ MYS C  +  A R F
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTF---LANHLITMYSHCADLASALRLF 79

Query: 620 DLMPVRNVYSWNSMISGYARH 640
             MP RN  SW +++SG +++
Sbjct: 80  AAMPRRNAVSWTTLVSGLSQN 100


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 278/711 (39%), Positives = 427/711 (60%), Gaps = 39/711 (5%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDM---- 290
           +A++SG+ R   F  AR +F++M  K++ S N ++ G  + + +    +   LFD     
Sbjct: 68  NAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARM---LFDSMPEK 124

Query: 291 -VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
            V   N +++ Y + G +D++R VF  M  K+S+SWN +++   ++G  EEA       R
Sbjct: 125 DVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEA-------R 177

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS----DVSVSNALLSLYADA 405
           R     S++ LIS   +C   G++   + + G+  +L  D     D+   N ++S YA  
Sbjct: 178 RLFESKSDWELISC--NCLMGGYV--KRNMLGDARQL-FDQIPVRDLISWNTMISGYAQD 232

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
           G LS+  ++F   P  D  +W +++ A+   + ++ EA + + +M +       +++  +
Sbjct: 233 GDLSQARRLFEESPVRDVFTWTAMVYAYV-QDGMLDEARRVFDEMPQK----REMSYNVM 287

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           +A  + +    +G ++  ++   N+ +     N ++S Y + G++     +F  M +R D
Sbjct: 288 IAGYAQYKRMDMGRELFEEMPFPNIGSW----NIMISGYCQNGDLAQARNLFDMMPQR-D 342

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
            VSW ++I+GY  N L  +AMN++  M + G+ L+  TF   LSACA +A LE G +VH 
Sbjct: 343 SVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHG 402

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
             VR   E   ++G+ALV MY KCG ID A   F  +  +++ SWN+M++GYARHG G +
Sbjct: 403 QVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQ 462

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
           ALT+F  M   G  PD +T VGVLSACSH GL D G ++F SM++ YG+ P  + ++CM+
Sbjct: 463 ALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMI 522

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQ 764
           DLLGRAG L++ +  I  MP  P++  W  +LGA     N    ELG +AA M+F+MEP 
Sbjct: 523 DLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGN---MELGEQAAEMVFKMEPH 579

Query: 765 NAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPE 824
           N+  YVLL+N+YA+ G+W DV+K R  M++  V+K  G SWV +++ +H F  GD  HPE
Sbjct: 580 NSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPE 639

Query: 825 KDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKL 883
           K  IY  L+EL+ KM+  GYV  TK  L D+E E K+ ++ YHSEK+AVAF +LT  S  
Sbjct: 640 KGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGK 699

Query: 884 PIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           PIR+MKNLRVC DCH+A K ISKIVGR I++RDS+R+HHF++G CSC DYW
Sbjct: 700 PIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 139/559 (24%), Positives = 259/559 (46%), Gaps = 47/559 (8%)

Query: 23  CNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF-----KEM 77
           C   I+ ++R G    A  +FD MP RNSVS+  ++SGY      + A  +F     K++
Sbjct: 36  CTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDL 95

Query: 78  VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
                +L  YA    LR  +               ++  S    D +  N +++ Y    
Sbjct: 96  FSWNLMLTGYARNRRLRDAR---------------MLFDSMPEKDVVSWNAMLSGYVRS- 139

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF-SRMQRE---------GF- 186
              D AR +F+ +  ++ ISWN +++ Y + G      +LF S+   E         G+ 
Sbjct: 140 GHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYV 199

Query: 187 -RYSLKPNEYTFGSLITA---AYSSVLSGSYLLQQILAMVKK---AGLLSDLYVGSALVS 239
            R  L      F  +      ++++++SG Y     L+  ++      + D++  +A+V 
Sbjct: 200 KRNMLGDARQLFDQIPVRDLISWNTMISG-YAQDGDLSQARRLFEESPVRDVFTWTAMVY 258

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNGL 297
            + + G    AR++F++M QK  +S N ++ G  + K  ++   L     F  +   N +
Sbjct: 259 AYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIM 318

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           ++ Y + G +  +R++F  M  +DSVSW  +I+G  QNG YEEA+     M+RDG   + 
Sbjct: 319 ISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNR 378

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
            +    LS+CA +  + LG+Q+HG+ ++ G +    V NAL+ +Y   G +     VF  
Sbjct: 379 STFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQG 438

Query: 418 MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
           +   D VSWN+++  +A       +A+  +  M  AG  P+ +T + +L+A S   +   
Sbjct: 439 VQHKDIVSWNTMLAGYA-RHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDR 497

Query: 478 GHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI-SG 535
           G +  H+    Y +   +     ++   G+ G +++ + +   M    D  +W +++ + 
Sbjct: 498 GTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGAS 557

Query: 536 YIHN--ELLPKAMNLVWFM 552
            IH   EL  +A  +V+ M
Sbjct: 558 RIHGNMELGEQAAEMVFKM 576



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 215/481 (44%), Gaps = 85/481 (17%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+F  N ++  Y R   L  A  LFD MP+++ VSW  ++SGY   G  +EA  +F  M 
Sbjct: 94  DLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMP 153

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
               +     L + +R+ +          ++    + +S   ++ +  N L+  Y     
Sbjct: 154 HKNSISWNGLLAAYVRSGR----------LEEARRLFESKSDWELISCNCLMGGYVKRNM 203

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ-REGFRYSLKPNEYTF 197
             D AR++F++I  RDLISWN++IS Y+Q GD     +LF     R+ F ++     Y  
Sbjct: 204 LGD-ARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQ 262

Query: 198 GSLITAA--------------YSSVLSGSYLLQQILAMVKKAGLLSDLY-------VGS- 235
             ++  A              Y+ +++G        A  K+  +  +L+       +GS 
Sbjct: 263 DGMLDEARRVFDEMPQKREMSYNVMIAG-------YAQYKRMDMGRELFEEMPFPNIGSW 315

Query: 236 -ALVSGFARLGNFYYARKIFEQMIQKNVVS-----------------MNGLMEGRRK--- 274
             ++SG+ + G+   AR +F+ M Q++ VS                 MN L+E +R    
Sbjct: 316 NIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGES 375

Query: 275 ---------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
                                GK+VHG ++R+G      VGN LV MY KCG ID++  V
Sbjct: 376 LNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDV 435

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           F+ +  KD VSWNTM++G  ++G   +A+  F +M   G+     +++  LS+C+  G  
Sbjct: 436 FQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLT 495

Query: 374 MLGQQ-IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIG 431
             G +  H      G+  +      ++ L   AG L     +   MP E D  +W +++G
Sbjct: 496 DRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLG 555

Query: 432 A 432
           A
Sbjct: 556 A 556



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 136/288 (47%), Gaps = 14/288 (4%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N +I+ Y + GDLA A  LFD MP R+SVSWA I++GY   G+  EA  M  EM R G  
Sbjct: 316 NIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGES 375

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           LNR      L AC +   +  + G QVH  V+++      LV N L+ MY  C    D A
Sbjct: 376 LNRSTFCCALSACADI--AALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKC-GCIDEA 432

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
             +F+ ++ +D++SWN++++ Y++ G       +F  M   G    +KP+E T   +++A
Sbjct: 433 YDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAG----VKPDEITMVGVLSA 488

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNV 262
              + L+     +   +M K  G+  +    + ++    R G    A+ +   M  + + 
Sbjct: 489 CSHTGLTDRG-TEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDA 547

Query: 263 VSMNGLMEGRR-KGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCG 305
            +   L+   R  G    G      +F M    +G    L N+YA  G
Sbjct: 548 ATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASG 595



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 151/367 (41%), Gaps = 61/367 (16%)

Query: 18  YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKE- 76
           +++  CN L+  YV+   L  A +LFD++P R+ +SW  ++SGY   G  ++A ++F+E 
Sbjct: 186 WELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEES 245

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS------NVLI 130
            VR  F         V                    ++ ++ + FD +        NV+I
Sbjct: 246 PVRDVFTWTAMVYAYVQDG-----------------MLDEARRVFDEMPQKREMSYNVMI 288

Query: 131 AMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-QREGFRYS 189
           A Y    +  D  R +FEE+   ++ SWN +IS Y Q GD      LF  M QR+   ++
Sbjct: 289 AGYAQ-YKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWA 347

Query: 190 LKPNEYTFGSLITAAYSSV------------------------LSGSYLLQQILAMVKKA 225
                Y    L   A + +                        ++   L +Q+   V + 
Sbjct: 348 AIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRT 407

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------RKGKEVH 279
           G      VG+ALV  + + G    A  +F+ +  K++VS N ++ G       R+   V 
Sbjct: 408 GYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVF 467

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQ 334
             +I +G+        G+++  +  G  D     F  M     I  +S  +  MI  L +
Sbjct: 468 ESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGR 527

Query: 335 NGCYEEA 341
            GC EEA
Sbjct: 528 AGCLEEA 534



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 123/273 (45%), Gaps = 52/273 (19%)

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           +  + + G  D A   FD MP+RN  S+N+MISGY R+     A  LF +M    P  D 
Sbjct: 40  ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKM----PHKDL 95

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFIN 722
            ++  +L+  +    + +    F SM +       +  ++ M+    R+G +D+  +  +
Sbjct: 96  FSWNLMLTGYARNRRLRDARMLFDSMPE-----KDVVSWNAMLSGYVRSGHVDEARDVFD 150

Query: 723 KMPITPNSLIWRTVLGACCRA---------------------NC------RKTELGRKAA 755
           +MP   NS+ W  +L A  R+                     NC      ++  LG   A
Sbjct: 151 RMP-HKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLG--DA 207

Query: 756 NMLFEMEP-QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
             LF+  P ++ +++  + + YA  G   D+++AR+  +E+ V+     +W  M   V+ 
Sbjct: 208 RQLFDQIPVRDLISWNTMISGYAQDG---DLSQARRLFEESPVRDVF--TWTAM---VYA 259

Query: 815 FVAG---DESHPEKDLIYEKLKELNQKMRDAGY 844
           +V     DE+    D + +K +E++  +  AGY
Sbjct: 260 YVQDGMLDEARRVFDEMPQK-REMSYNVMIAGY 291



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 48/97 (49%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H Q+++ G+     + N L+ +Y + G +  A  +F  +  ++ VSW  +++GY  
Sbjct: 397 GKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYAR 456

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G   +A  +F+ M+ AG   +   +  VL AC   G
Sbjct: 457 HGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTG 493


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 281/790 (35%), Positives = 431/790 (54%), Gaps = 102/790 (12%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGN----FYYARKIFEQMIQKNVVSMNGLMEG 271
           + I A   KAGLL   Y+ + L+S +AR G     F+ AR++F+ +              
Sbjct: 45  RAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDI-------------- 90

Query: 272 RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
                    Y  R+         N L++MYAK G + D+R VF  M  +D+VSW  M+ G
Sbjct: 91  --------PYARRNAF-----TWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVG 137

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
           L++ G + +A+  F  M  +GL  S F L + LSSCA+     +G+++H   +KLGL S 
Sbjct: 138 LNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSC 197

Query: 392 VSVSN-------------------------------ALLSLYADAGYLSRCLKVFFLMPE 420
           V V+N                               A++SLY   G +   L +F  M E
Sbjct: 198 VPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEE 257

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG-WSPNGVTFINILAAASSFSMGKLGH 479
              VSWN++I  + +   L   A+K++  M  A    P+  T  ++L+A ++  M K+G 
Sbjct: 258 RSIVSWNAIIAGY-NQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGK 316

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR-------------------- 519
           Q+H+ +++  +   + I NAL+S Y K G ++   +I  +                    
Sbjct: 317 QMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVK 376

Query: 520 ------------MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
                       +   RD ++W +MI GY  N    +AM L   M++ G   +  T A V
Sbjct: 377 LGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAV 436

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN- 626
           LSACAS+A L  G ++H   +R+  E  V + +A++ +Y++ G +  A R FD +  R  
Sbjct: 437 LSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKE 496

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
             +W SMI   A+HG G++A+ LF +M   G  PD VT++GV SAC+HAG +D+G ++++
Sbjct: 497 TVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYE 556

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANC 745
            M   +G++P++  ++CMVDLL RAG L +  EFI +MP+ P++++W ++L AC  R N 
Sbjct: 557 QMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNA 616

Query: 746 RKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSW 805
              EL   AA  L  ++P N+  Y  LAN+Y++ G+W D A+  K  K+  VKKE G SW
Sbjct: 617 DLAEL---AAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSW 673

Query: 806 VTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVS 865
             ++  VHVF A D  HP++D I +K  E+ ++++ AG+VP     L D++ E KE+L+S
Sbjct: 674 THVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLS 733

Query: 866 YHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFN 924
            HSEK+A+AF +++   K  +RIMKNLRVC DCH+A KFISK+V REI++RD+ RFHHF 
Sbjct: 734 RHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFR 793

Query: 925 DGKCSCGDYW 934
           DG CSC DYW
Sbjct: 794 DGYCSCKDYW 803



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 189/746 (25%), Positives = 332/746 (44%), Gaps = 144/746 (19%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           + F  N+L+++Y + G LA A  +F +MP+R++VSW  +V G    G   +A K F +MV
Sbjct: 96  NAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMV 155

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             G   +++ L +VL +C      G   G +VH  V+K   +    V+N ++ MYG C +
Sbjct: 156 GEGLAPSQFMLTNVLSSCAATEARG--IGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGD 213

Query: 139 ST------------------------------DCARRIFEEIETRDLISWNSIISVYSQR 168
           +                               D A  +FE +E R ++SWN+II+ Y+Q 
Sbjct: 214 AETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQN 273

Query: 169 GDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL 228
           G      K FSRM       S++P+E+T  S+++A  +  L    + +Q+ + + + G+ 
Sbjct: 274 GLDDMALKFFSRMLTAS---SMEPDEFTVTSVLSACAN--LRMLKMGKQMHSYILRTGMP 328

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMI--QKNVVSMNGLMEGRRKGKEVHGYLIRSG 286
               + +AL+S +A+ G+   AR+I ++ +    NV+S   L+EG               
Sbjct: 329 YSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEG--------------- 373

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
                         Y K G    +R VF  M  +D ++W  MI G +QNG  +EA+  F 
Sbjct: 374 --------------YVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFR 419

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
           +M R G   ++ +L + LS+CASL ++  G+QIH   ++   +  VSVSNA++++YA +G
Sbjct: 420 SMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSG 479

Query: 407 YLSRCLKVF-FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
            +    +VF  +    + V+W S+I A A    L  +A+  + +M R G  P+ VT+I +
Sbjct: 480 SVPLARRVFDQICWRKETVTWTSMIVALAQ-HGLGEQAIVLFEEMLRVGVKPDRVTYIGV 538

Query: 466 LAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
            +A +       G + + Q++ ++ +  E +    ++    + G + +  +   RM    
Sbjct: 539 FSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAP 598

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
           D V W S+                                   L+AC     + +  ++ 
Sbjct: 599 DTVVWGSL-----------------------------------LAAC----RVRKNADLA 619

Query: 585 ACGVRACLEFDVVIG---SALVDMYSKCGRIDYASRFFDLMPVRNV-----YSWNSMISG 636
                  L  D       SAL ++YS CGR + A+R + L   + V     +SW  + S 
Sbjct: 620 ELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSK 679

Query: 637 YARHGHGD-----------KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK-- 683
               G  D           KA  ++ ++K  G +PD       L++  H   VD+  K  
Sbjct: 680 VHVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPD-------LNSVLHD--VDDELKEE 730

Query: 684 ----HFKSMSQVYGLIPQLEQFSCMV 705
               H + ++  +GLI   E+ +  +
Sbjct: 731 LLSRHSEKLAIAFGLISTPEKTTLRI 756



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 200/489 (40%), Gaps = 112/489 (22%)

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK---------------------- 413
           G+ IH   +K GL     + N LLS YA AG    C                        
Sbjct: 44  GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103

Query: 414 ---------------VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
                          VF  MPE D VSW  ++    +      +AVK +LDM   G +P+
Sbjct: 104 LSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGL-NRAGRFWDAVKTFLDMVGEGLAPS 162

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
                N+L++ ++     +G +VH+ VIK  +++   + N++L  YGKCG+ +    +F 
Sbjct: 163 QFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFE 222

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR----------------------- 555
           RM + R E SWN+M+S Y H   +  A+++   M +R                       
Sbjct: 223 RM-KVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALK 281

Query: 556 ---------GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMY 606
                        D FT  +VLSACA++  L+ G ++H+  +R  + +   I +AL+  Y
Sbjct: 282 FFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTY 341

Query: 607 SKCGRIDYASRF---------------------------------FDLMPVRNVYSWNSM 633
           +K G ++ A R                                  FD+M  R+V +W +M
Sbjct: 342 AKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAM 401

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I GY ++G  D+A+ LF  M   GP P+  T   VLSAC  A L   G+        +  
Sbjct: 402 IVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSAC--ASLAYLGYGKQIHCRAIRS 459

Query: 694 LIPQLEQFS-CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
           L  Q    S  ++ +  R+G +       +++     ++ W +++ A  +       LG 
Sbjct: 460 LQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHG-----LGE 514

Query: 753 KAANMLFEM 761
           +A  +  EM
Sbjct: 515 QAIVLFEEM 523



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 132/314 (42%), Gaps = 72/314 (22%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K G +  V + N+++ +Y + GD  +A  +F+ M  R+  SW  +VS YTH+G  
Sbjct: 186 HSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRM 245

Query: 68  NEACKMFKEM----------VRAGFLLN----------------------RYALGSVLRA 95
           + A  MF+ M          + AG+  N                       + + SVL A
Sbjct: 246 DLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSA 305

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC------------------- 136
           C        K G Q+H  +L++   +   + N LI+ Y                      
Sbjct: 306 CANL--RMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLN 363

Query: 137 -------------LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
                        L  T  AR +F+ +  RD+I+W ++I  Y Q G      +LF  M R
Sbjct: 364 VISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIR 423

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G     +PN +T  ++++A  S    G    +QI     ++     + V +A+++ +AR
Sbjct: 424 SG----PEPNSHTLAAVLSACASLAYLG--YGKQIHCRAIRSLQEQSVSVSNAIITVYAR 477

Query: 244 LGNFYYARKIFEQM 257
            G+   AR++F+Q+
Sbjct: 478 SGSVPLARRVFDQI 491



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/388 (23%), Positives = 146/388 (37%), Gaps = 80/388 (20%)

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC------------------ 503
           F  +L  + +      G  +HA  +K  +     + N LLS                   
Sbjct: 28  FARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLF 87

Query: 504 -------------------YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
                              Y K G + D   +FA+M E RD VSW  M+ G         
Sbjct: 88  DDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPE-RDAVSWTVMVVGLNRAGRFWD 146

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
           A+     M+  G     F    VLS+CA+      G +VH+  ++  L   V + ++++ 
Sbjct: 147 AVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLY 206

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
           MY KCG  + A   F+ M VR+  SWN+M+S Y   G  D AL++F  M+        V+
Sbjct: 207 MYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSI----VS 262

Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           +  +++  +  GL D   K F  M                                +   
Sbjct: 263 WNAIIAGYNQNGLDDMALKFFSRM--------------------------------LTAS 290

Query: 725 PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM-EPQNAVNYVLLANMYASGGKWE 783
            + P+     +VL AC  AN R  ++G++  + +     P ++     L + YA  G   
Sbjct: 291 SMEPDEFTVTSVLSAC--ANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSG--- 345

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDG 811
            V  AR+ M +A V      S+  + +G
Sbjct: 346 SVETARRIMDKAVVADLNVISFTALLEG 373



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 1/97 (1%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRN-SVSWACIVSGYTH 63
           K  H + ++      V + N +I VY R G +  A ++FD++  R  +V+W  ++     
Sbjct: 450 KQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQ 509

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G+  +A  +F+EM+R G   +R     V  AC   G
Sbjct: 510 HGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAG 546


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 269/750 (35%), Positives = 423/750 (56%), Gaps = 70/750 (9%)

Query: 218 ILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE 277
           IL  +K+     + ++ + L++ + +LGN  YA  +F+ + Q N+ S N ++        
Sbjct: 31  ILKTIKQP----ETFLSNNLITAYYKLGNLAYAHHVFDHIPQPNLFSWNTIL-------- 78

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
                                ++Y+K G +   + +F  M  +D VSWN  ISG    G 
Sbjct: 79  ---------------------SVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGS 117

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLIST-LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
             +A+  +  M +D  M+ N    ST L  C+    + LG+QI+G+ LK G  SDV V +
Sbjct: 118 CSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGS 177

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEH-------------------------------DQVS 425
            L+ +Y   G +    + F  MPE                                D +S
Sbjct: 178 PLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSIS 237

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           W  +I     +  L  EA+  + +MR AG++ +  TF ++L A  S      G Q+HA V
Sbjct: 238 WTIMITGLMQN-GLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYV 296

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
           I+ +  +   + +AL+  Y KC  +   E +F RM ++ + +SW +M+ GY  N    +A
Sbjct: 297 IRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQK-NVISWTAMLVGYGQNGFSEEA 355

Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
           + + + M + G   D FT  +V+S+CA++A+LE G + H   + + L   + + +AL+ +
Sbjct: 356 VKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITL 415

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
           Y KCG  + + R F  M +R+  SW ++++GYA+ G  ++ + LF +M   G  PD VTF
Sbjct: 416 YGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTF 475

Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
           +GVLSACS AGLV++G ++F+SM + +G++P ++  +C++DLLGRAG L++   FIN MP
Sbjct: 476 IGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMP 535

Query: 726 ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDV 785
             P+ + W T+L + CR +    E+G+ AA+ L  +EPQN  +YVLL+++YAS GKW+ V
Sbjct: 536 CHPDVVGWATLLSS-CRVH-GDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKV 593

Query: 786 AKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
           A+ R+ M++  V+KE G SW+  K  VHVF A D+S P    IY +L++LN KM + GYV
Sbjct: 594 AQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYV 653

Query: 846 PQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFI 904
           P     L D+E   K  ++++HSEK+A+AF ++     LPIR++KNLRVCGDCH+A KFI
Sbjct: 654 PDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFI 713

Query: 905 SKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           SKI  REI++RD+ RFH F DG CSCGD+W
Sbjct: 714 SKITQREILVRDAVRFHLFKDGTCSCGDFW 743



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 165/585 (28%), Positives = 291/585 (49%), Gaps = 64/585 (10%)

Query: 85  NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCAR 144
           N YA  S+L+ C  C         ++HCL+LK+ +  +  +SN LI  Y   L +   A 
Sbjct: 6   NYYA--SLLKLC--CESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYK-LGNLAYAH 60

Query: 145 RIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ-REGFRYSLKPNEY-TFGSL-- 200
            +F+ I   +L SWN+I+SVYS+ G    + ++F+ M  R+G  ++L  + Y  +GS   
Sbjct: 61  HVFDHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSD 120

Query: 201 ------------------ITAAYSSVLSGSY----LLQQILAMVKKAGLLSDLYVGSALV 238
                             IT +   +L   +    L +QI   + K G  SD++VGS LV
Sbjct: 121 AVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLV 180

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLV 298
             + +LG  Y A++ F++M ++NVV  N ++ G                           
Sbjct: 181 DMYTKLGLIYDAKRYFDEMPERNVVMCNTMITG--------------------------- 213

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
               +CG I++S+ +F  +  +DS+SW  MI+GL QNG   EA+  F  MR  G     F
Sbjct: 214 --LMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQF 271

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           +  S L++C SL  +  G+QIH   ++     +V V +AL+ +Y+    +     VF  M
Sbjct: 272 TFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRM 331

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
           P+ + +SW +++  +  +     EAVK + +M+R G  P+  T  +++++ ++ +  + G
Sbjct: 332 PQKNVISWTAMLVGYGQN-GFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEG 390

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
            Q H + +   + +  T+ NAL++ YGKCG  ++  ++F  M+  RDEVSW ++++GY  
Sbjct: 391 AQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMN-IRDEVSWTALLAGYAQ 449

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
                + + L   M+  G + D  TF  VLSAC+    +E+G++     ++      +V 
Sbjct: 450 FGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVD 509

Query: 599 G-SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHG 641
             + ++D+  + GR++ A  F + MP   +V  W +++S    HG
Sbjct: 510 HCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHG 554



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 219/509 (43%), Gaps = 92/509 (18%)

Query: 5   KLFHLQILKHGFAY----DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           KL +L    H F +    ++F  NT+++VY ++G L+   ++F+ MP R+ VSW   +SG
Sbjct: 52  KLGNLAYAHHVFDHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISG 111

Query: 61  YTHKGMSNEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFK---FGMQVHCLVLK 116
           Y + G  ++A +++K M++ A   LNR    ++L  C     S F+    G Q++  +LK
Sbjct: 112 YANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILC-----SKFRCVDLGRQINGQILK 166

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCAR------------------------------RI 146
                D  V + L+ MY       D  R                              R+
Sbjct: 167 FGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRL 226

Query: 147 FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS 206
           F  ++ RD ISW  +I+   Q G       +F  M+  GF      +++TFGS++TA  S
Sbjct: 227 FCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAM----DQFTFGSVLTACGS 282

Query: 207 SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN 266
            +  G    +QI A V +     +++VGSALV  +++  +   A  +F++M QKNV+S  
Sbjct: 283 LLALGEG--KQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWT 340

Query: 267 GLMEGR-----------------------------------------RKGKEVHGYLIRS 285
            ++ G                                           +G + H   + S
Sbjct: 341 AMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVS 400

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
           GL   + V N L+ +Y KCG+ ++S  +F  M  +D VSW  +++G  Q G   E I  F
Sbjct: 401 GLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLF 460

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSLYAD 404
             M   GL     + I  LS+C+  G +  G Q     +K  G+   V     ++ L   
Sbjct: 461 ERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGR 520

Query: 405 AGYLSRCLKVFFLMPEH-DQVSWNSVIGA 432
           AG L         MP H D V W +++ +
Sbjct: 521 AGRLEEARNFINNMPCHPDVVGWATLLSS 549



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 137/279 (49%), Gaps = 13/279 (4%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H  +++     +VF+ + L+++Y +   + SA  +F  MP +N +SW  ++ GY 
Sbjct: 288 EGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYG 347

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G S EA K+F EM R G   + + LGSV+ +C     +  + G Q HC  L S     
Sbjct: 348 QNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANL--ASLEEGAQFHCRALVSGLISF 405

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             VSN LI +YG C  ST+ + R+F E+  RD +SW ++++ Y+Q G       LF RM 
Sbjct: 406 ITVSNALITLYGKC-GSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERML 464

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             G    LKP+  TF  +++A   + L     LQ   +M+K+ G++  +   + ++    
Sbjct: 465 AHG----LKPDGVTFIGVLSACSRAGLVEKG-LQYFESMIKEHGIMPIVDHCTCIIDLLG 519

Query: 243 RLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVHG 280
           R G    AR     M    +VV    L+   R    VHG
Sbjct: 520 RAGRLEEARNFINNMPCHPDVVGWATLLSSCR----VHG 554



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 70/147 (47%), Gaps = 4/147 (2%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +A++L  C       +  ++H   ++   + +  + + L+  Y K G + YA   FD +P
Sbjct: 8   YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
             N++SWN+++S Y++ G   +   +F+ M    P  D V++   +S  ++ G   +  +
Sbjct: 68  QPNLFSWNTILSVYSKLGLLSQMQQIFNLM----PFRDGVSWNLAISGYANYGSCSDAVR 123

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGR 710
            +K M +   +      FS M+ L  +
Sbjct: 124 VYKLMLKDAAMNLNRITFSTMLILCSK 150


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 277/750 (36%), Positives = 421/750 (56%), Gaps = 54/750 (7%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK--------------- 274
           D+ VG++LV  +    +    RK+FE M+++NVV+   L+ G  +               
Sbjct: 90  DIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMR 149

Query: 275 --------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
                                     G+ VH   I+ G    V V N L+NMYAKCG ++
Sbjct: 150 AEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVE 209

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
           ++R VF  M  +D VSWNT+++GL  NG   EA+  F   R    M +  +  + ++ CA
Sbjct: 210 EARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCA 269

Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWN 427
           +L  + L +Q+H   LK G  S  +V  AL+  Y  AG L + L VF LM    + VSW 
Sbjct: 270 NLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWT 329

Query: 428 SVI-GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
           ++I G   + +  ++ A+  +  MR  G +PN +T+  IL    + S      Q+HAQVI
Sbjct: 330 AMIDGCIQNGDIPLAAAL--FSRMREDGVAPNDLTYSTIL----TVSEASFPPQIHAQVI 383

Query: 487 KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAM 546
           K N     T+  AL+  Y K    ++   IF +M +++D VSW++M++ Y        A 
Sbjct: 384 KTNYECTPTVGTALMVSYSKLCSTEEALSIF-KMIDQKDVVSWSAMLTCYAQAGDCNGAT 442

Query: 547 NLVWFMMQRGQRLDHFTFATVLSACASVAT-LERGMEVHACGVRACLEFDVVIGSALVDM 605
           N    M   G + + FT ++ + ACAS A  ++ G + HA  ++      + + SALV M
Sbjct: 443 NAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSM 502

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
           Y++ G I+ A   F+    R++ SWNSM+SGYA+HG+  KAL +F QM+++G   D +TF
Sbjct: 503 YARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTF 562

Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
           + V+  C+HAGLV+EG ++F  M + YG+ P ++ ++CMVDL  RAG+LD+    I  MP
Sbjct: 563 LSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMP 622

Query: 726 ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDV 785
                 IWR +LGA CR + +  ELG+ AA  L  +EP ++  YVLL+N+Y++ GKW++ 
Sbjct: 623 FPAGPTIWRALLGA-CRVH-KNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEK 680

Query: 786 AKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
            + RK M   +V+KEAGCSW+ +K+ VH F+A D+SHP  + IY KL+ +  K++  GY 
Sbjct: 681 DEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYC 740

Query: 846 PQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFI 904
           P T F   D+  + KE +++ HSE++A+AF ++      P+ I KNLRV GD H+  K +
Sbjct: 741 PDTSFVPHDVAEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKNLRVSGDGHTVMKMV 800

Query: 905 SKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           S+I  REIV+RD  RFHHF  G CSCGD+W
Sbjct: 801 SEIEDREIVMRDCCRFHHFKSGVCSCGDFW 830



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 231/460 (50%), Gaps = 10/460 (2%)

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
           ++ + G +  R  GK++H   +R G     + VG  LV+MY    ++ D R VF  M+ +
Sbjct: 61  IIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKR 120

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           + V+W ++++G  Q G   + +  F  MR +G+  + F+  S LS  AS G + LGQ +H
Sbjct: 121 NVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVH 180

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI-GAFADSEAL 439
            + +K G  S V V N+L+++YA  G +     VF  M   D VSWN+++ G   +   L
Sbjct: 181 AQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDL 240

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
             EA++ + D R +       T+  ++   ++     L  Q+H+ V+K+   +   +  A
Sbjct: 241 --EALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTA 298

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  Y K G++D    +F  MS  ++ VSW +MI G I N  +P A  L   M + G   
Sbjct: 299 LMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAP 358

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           +  T++T+L    +V+      ++HA  ++   E    +G+AL+  YSK    + A   F
Sbjct: 359 NDLTYSTIL----TVSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIF 414

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC-SHAGLV 678
            ++  ++V SW++M++ YA+ G  + A   F +M + G  P+  T    + AC S A  V
Sbjct: 415 KMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGV 474

Query: 679 DEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
           D G + F ++S  +     L   S +V +  R G ++  +
Sbjct: 475 DLG-RQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQ 513



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 234/491 (47%), Gaps = 36/491 (7%)

Query: 327 TMISGLDQNGCYEEAIMNFC-AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           TM       G   +A+ +F  A RR G      +L+  +  C S+   +LG+Q+H   ++
Sbjct: 24  TMPFSTTWQGFVHQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVR 83

Query: 386 LGLD-SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
            G D  D+ V  +L+ +Y +   +    KVF  M + + V+W S++  +  +  L+ + +
Sbjct: 84  CGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLL-DVM 142

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
             +  MR  G  PN  TF ++L+  +S  M  LG  VHAQ IK+   +   + N+L++ Y
Sbjct: 143 SLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMY 202

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            KCG +++   +F RM E RD VSWN++++G + N    +A+ L          L   T+
Sbjct: 203 AKCGLVEEARVVFCRM-ETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTY 261

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP- 623
           +TV++ CA++  L    ++H+  ++        + +AL+D Y+K G++D A   F LM  
Sbjct: 262 STVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSG 321

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-------HAG 676
            +NV SW +MI G  ++G    A  LFS+M+ DG  P+ +T+  +L+          HA 
Sbjct: 322 SQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASFPPQIHAQ 381

Query: 677 LVDEGFKHFKSMS-----------------QVYGLIPQLE--QFSCMVDLLGRAGELDKI 717
           ++   ++   ++                   ++ +I Q +   +S M+    +AG+ +  
Sbjct: 382 VIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGA 441

Query: 718 EEFINKMP---ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY-VLLA 773
                KM    + PN     + + AC  +     +LGR+   +  +    +A+     L 
Sbjct: 442 TNAFIKMTMHGLKPNEFTISSAIDACA-SPAAGVDLGRQFHAISIKHRCHDALCVSSALV 500

Query: 774 NMYASGGKWED 784
           +MYA  G  E+
Sbjct: 501 SMYARKGSIEN 511



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 132/556 (23%), Positives = 241/556 (43%), Gaps = 52/556 (9%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+ +  +L+++Y+    +    K+F+ M  RN V+W  +++GY   G+  +   +F  M 
Sbjct: 90  DIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMR 149

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             G   N +   SVL      G      G  VH   +K        V N L+ MY  C  
Sbjct: 150 AEGVWPNPFTFSSVLSMVASQGM--VDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKC-G 206

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKP-NEYTF 197
             + AR +F  +ETRD++SWN++++     G  +   +LF        R S+    E T+
Sbjct: 207 LVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLF-----HDSRSSITMLTESTY 261

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            ++I    +  L    L +Q+ + V K G  S   V +AL+  + + G    A  +F  M
Sbjct: 262 STVINLCAN--LKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLM 319

Query: 258 I-QKNVVSMNGLMEG-----------------RRKG--------------------KEVH 279
              +NVVS   +++G                 R  G                     ++H
Sbjct: 320 SGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASFPPQIH 379

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
             +I++       VG  L+  Y+K  + +++ S+F+ +  KD VSW+ M++   Q G   
Sbjct: 380 AQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCN 439

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCAS-LGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
            A   F  M   GL  + F++ S + +CAS    + LG+Q H   +K      + VS+AL
Sbjct: 440 GATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSAL 499

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           +S+YA  G +     VF    + D +SWNS++  +A       +A+  +  M   G   +
Sbjct: 500 VSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYA-QHGYSQKALDVFRQMEVEGIDMD 558

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIF 517
           G+TF++++   +   + + G Q    +++ Y +         ++  Y + G++D+   + 
Sbjct: 559 GLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLI 618

Query: 518 ARMSERRDEVSWNSMI 533
             M        W +++
Sbjct: 619 EGMPFPAGPTIWRALL 634



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 213/470 (45%), Gaps = 58/470 (12%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q +K G    VF+CN+L+N+Y + G +  A  +F  M  R+ VSW  +++G    G  
Sbjct: 180 HAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRD 239

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA ++F +   +  +L      +V+  C      G     Q+H  VLK      G V  
Sbjct: 240 LEALQLFHDSRSSITMLTESTYSTVINLCANLKHLG--LARQLHSSVLKHGFHSYGNVMT 297

Query: 128 VLIAMYGSCLESTDCARRIFEEIE-TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
            L+  Y    +  D A  +F  +  +++++SW ++I    Q GD      LFSRM+ +G 
Sbjct: 298 ALMDAYNKAGQ-LDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDG- 355

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              + PN+ T+ +++T + +S         QI A V K        VG+AL+  +++L +
Sbjct: 356 ---VAPNDLTYSTILTVSEAS------FPPQIHAQVIKTNYECTPTVGTALMVSYSKLCS 406

Query: 247 FYYARKIFEQMIQKNVVS-------------------------MNGLME----------- 270
              A  IF+ + QK+VVS                         M+GL             
Sbjct: 407 TEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDA 466

Query: 271 ------GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                 G   G++ H   I+    D + V + LV+MYA+ G+I++++ VF     +D +S
Sbjct: 467 CASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLS 526

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           WN+M+SG  Q+G  ++A+  F  M  +G+     + +S +  CA  G +  GQQ     +
Sbjct: 527 WNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMV 586

Query: 385 K-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           +  G+   +     ++ LY+ AG L   + +   MP       W +++GA
Sbjct: 587 RDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGA 636



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 155/353 (43%), Gaps = 46/353 (13%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP-DRNSVSWACIVSGYT 62
           A+  H  +LKHGF     +   L++ Y + G L  A  +F  M   +N VSW  ++ G  
Sbjct: 277 ARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCI 336

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G    A  +F  M   G   N     ++L   +   P       Q+H  V+K+N    
Sbjct: 337 QNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASFPP------QIHAQVIKTNYECT 390

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V   L+  Y S L ST+ A  IF+ I+ +D++SW+++++ Y+Q GD       F +M 
Sbjct: 391 PTVGTALMVSY-SKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMT 449

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             G    LKPNE+T  S I A  S   +G  L +Q  A+  K      L V SALVS +A
Sbjct: 450 MHG----LKPNEFTISSAIDACASPA-AGVDLGRQFHAISIKHRCHDALCVSSALVSMYA 504

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
           R G+   A+ +FE+   ++++S N ++ G                             YA
Sbjct: 505 RKGSIENAQCVFERQTDRDLLSWNSMLSG-----------------------------YA 535

Query: 303 KCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           + G    +  VFR M    I  D +++ ++I G    G  EE    F  M RD
Sbjct: 536 QHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRD 588


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 291/904 (32%), Positives = 480/904 (53%), Gaps = 75/904 (8%)

Query: 86  RYALGSVLRACQECGP-SGFKFGMQVHCLVLKSNQ-TFDGLVSNVLIAMYGSC---LEST 140
           + A+G +L   Q+CG     + G ++  ++  S+Q + D +++  LI MY  C   LES 
Sbjct: 107 KEAMGMLL---QKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLES- 162

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQR---GDTISVF-KLFSRMQREGFRYSLKPNEYT 196
              R +F+ +  ++L  WN+++S Y +     + I  F +L S  +        +P+ +T
Sbjct: 163 ---RLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTE-------FQPDNFT 212

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           F  LI A         +L + +  M  K GL+ DL+VG+A+++ + + G    A ++F++
Sbjct: 213 FPCLIKACTGKC--DIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDK 270

Query: 257 MIQKNVVSMNGLMEGRRK------------------------------------------ 274
           M ++N++S N L+ G  +                                          
Sbjct: 271 MPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVD 330

Query: 275 -GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
            G  +HG  ++ GL   + V N L++MY+KCG + ++  +FR +  K  VSWN+MI    
Sbjct: 331 VGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYS 390

Query: 334 QNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
           + G   E   ++    M  + +  +  ++++ L +C     ++  + +HG  L+      
Sbjct: 391 REGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYK 450

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
             ++NA ++ YA  G L     VFF M      SWN+VIG  A +   + +A+ +Y +M 
Sbjct: 451 ELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPI-KALDFYFEMT 509

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
           R G  P+  + +++L A     + + G ++H  V++  +   + +  +LLS Y  C +  
Sbjct: 510 RLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPF 569

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
                F RM ++ + V WN+M+SGY  NEL  +A++L   M+  G   D    A++L AC
Sbjct: 570 YGRTYFERMGDK-NSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGAC 628

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           + ++ L  G EVH   ++  L  D  +  +L+DMY+K G + ++ R F+ +  + V SWN
Sbjct: 629 SQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWN 688

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
            MI+G+  HG G+KA+ LF  MK     PD  TF+GVL AC HAGLV EG  +   M  +
Sbjct: 689 VMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTL 748

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
           Y L P+LE ++C++D+LGRAG L++   FIN+MP  P++ IW ++L +         E+G
Sbjct: 749 YKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSS--SITYVDLEMG 806

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
            K A  L  +E   A +Y+LL+N+YA+ GKW+ V   R+ MK+  ++K+ GCSW+ ++  
Sbjct: 807 EKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGK 866

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
           V+ F+AG+ S+P  D I +    L +++ + GY P     L +LE   K  ++  HSEK+
Sbjct: 867 VYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKV 926

Query: 872 AVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           A+ F  L       +RI KNLR+C DCH+A K+ISK   REIV+RD+ RFHHF  G CSC
Sbjct: 927 AICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSC 986

Query: 931 GDYW 934
           GDYW
Sbjct: 987 GDYW 990



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 179/665 (26%), Positives = 309/665 (46%), Gaps = 56/665 (8%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           KL  +  +   F+ D  L   LI +Y   G    +  +FD + ++N   W  +VSGY   
Sbjct: 128 KLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRN 187

Query: 65  GMSNEACKMFKEMVRAG-FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            + +EA   F E++    F  + +    +++AC   G      G  VH + +K     D 
Sbjct: 188 ELYDEAIHTFLELISVTEFQPDNFTFPCLIKACT--GKCDIHLGKSVHGMAVKMGLIMDL 245

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V N +IA+YG C    D A  +F+++  ++LISWNS+I  +S+ G  +  ++ F  +  
Sbjct: 246 FVGNAMIALYGKC-GFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLE 304

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQIL-AMVKKAGLLSDLYVGSALVSGFA 242
            G    L P+  T  +L+         G+  +  ++  M  K GL+ +L V +AL+  ++
Sbjct: 305 SG--DGLIPDVATMVTLLPVCSG---EGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYS 359

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG-RRKG-------------------------- 275
           + G    A  +F ++  K+VVS N ++    R+G                          
Sbjct: 360 KCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTI 419

Query: 276 ----------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                           + +HGY +R        + N  +  YAKCG++  +  VF  M  
Sbjct: 420 LNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNT 479

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           K   SWN +I G  QNG   +A+  +  M R G++  +FS++S L +C  LG +  G++I
Sbjct: 480 KSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEI 539

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           HG  L+ GL+ +  V+ +LLSLY            F  M + + V WN+++  ++ +E L
Sbjct: 540 HGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNE-L 598

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
            +EA+  +  M   G  P+ +   +IL A S  S   LG +VH   +K ++  +  +  +
Sbjct: 599 PNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACS 658

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  Y K G +   ++IF R++  ++  SWN MI+G+  +    KA+ L   M +  ++ 
Sbjct: 659 LMDMYAKSGFLGHSQRIFNRLN-GKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQP 717

Query: 560 DHFTFATVLSACASVATLERGMEVHA-CGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
           D FTF  VL AC     +  G+   A       LE ++   + ++DM  + GR++ A  F
Sbjct: 718 DRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNF 777

Query: 619 FDLMP 623
            + MP
Sbjct: 778 INEMP 782



 Score =  206 bits (523), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 262/572 (45%), Gaps = 56/572 (9%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H   +K G   D+F+ N +I +Y + G L  A +LFD+MP++N +SW  ++ G++ 
Sbjct: 229 GKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSE 288

Query: 64  KGMSNEACKMFKEMVRA--GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
            G   EA + F+ ++ +  G + +   + ++L  C   G      GM +H + +K     
Sbjct: 289 NGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCS--GEGNVDVGMVIHGMAVKLGLVH 346

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           + +V N LI MY  C   ++ A  +F +IE + ++SWNS+I  YS+ G     F L  +M
Sbjct: 347 ELMVCNALIDMYSKCGCLSEAA-ILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKM 405

Query: 182 QREGFRYSLKPNEYTFGSLITAAY--SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
             E     ++ NE T  +L+ A    S +LS    L+ +     +        + +A ++
Sbjct: 406 WME--EELMEVNEVTILNLLPACLEESELLS----LRALHGYSLRHSFQYKELINNAFIA 459

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------- 274
            +A+ G+  +A  +F  M  K+V S N ++ G  +                         
Sbjct: 460 AYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFS 519

Query: 275 ----------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                           GKE+HG+++R+GL     V   L+++Y  C      R+ F  M 
Sbjct: 520 IVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMG 579

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            K+SV WN M+SG  QN    EA+  F  M  DGL     ++ S L +C+ L  + LG++
Sbjct: 580 DKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKE 639

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           +H   LK  L  D  V+ +L+ +YA +G+L    ++F  +   +  SWN +I  F     
Sbjct: 640 VHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFG-VHG 698

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-IKYNVANETTIE 497
             ++AV+ + DM+R+   P+  TF+ +L A     +   G    AQ+   Y +  E    
Sbjct: 699 QGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHY 758

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
             ++   G+ G +++       M E  D   W
Sbjct: 759 ACVIDMLGRAGRLNEALNFINEMPEEPDAKIW 790


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  491 bits (1263), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 278/700 (39%), Positives = 403/700 (57%), Gaps = 54/700 (7%)

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGL 297
           + G  R  N   AR +F+QM +++VVS N ++ G                          
Sbjct: 37  LRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSG-------------------------- 70

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
              YA+ G + +++ +F  M  K+S+SWN M++   QNG  E+A       RR     ++
Sbjct: 71  ---YAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDA-------RRLFESKAD 120

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS-NALLSLYADAGYLSRCLKVFF 416
           + LIS   +C   G++   + +   G+   +     VS N ++S YA  G L    ++F 
Sbjct: 121 WELISW--NCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFE 178

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
             P  D  +W +++  +  +  ++ EA + +  M       N V++  I+A         
Sbjct: 179 ESPVRDVFTWTAMVSGYVQN-GMLDEARRVFDGMP----EKNSVSWNAIIAGYVQCKRMD 233

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY 536
              ++   +   NV++     N +++ Y + G++      F RM +R D +SW ++I+GY
Sbjct: 234 QARELFEAMPCQNVSSW----NTMITGYAQNGDIAQARNFFDRMPQR-DSISWAAIIAGY 288

Query: 537 IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
             +    +A++L   M + G+RL+  TF + LS CA +A LE G +VH   V+A LE   
Sbjct: 289 AQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGC 348

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
            +G+AL+ MY KCG ID A   F+ +  + V SWN+MI+GYARHG G +AL LF  MK  
Sbjct: 349 YVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKT 408

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
           G LPD VT VGVLSACSH GLVD+G ++F SM+Q YG+    + ++CM+DLLGRAG LD 
Sbjct: 409 GILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDD 468

Query: 717 IEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANM 775
            +  +  MP  P++  W  +LGA     N   TELG KAA M+FEMEP N+  YVLL+N+
Sbjct: 469 AQNLMKNMPFEPDAATWGALLGASRIHGN---TELGEKAAKMIFEMEPDNSGMYVLLSNL 525

Query: 776 YASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKEL 835
           YA+ G+W DV + R  M++  VKK  G SWV +++ +H F  GD  HPE+D IY  L+EL
Sbjct: 526 YAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEEL 585

Query: 836 NQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVC 894
           + KM+  GYV  TK  L D+E E K  ++ YHSEK+AVAF +L   +  PIR++KNLRVC
Sbjct: 586 DLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVC 645

Query: 895 GDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            DCH+A K ISKIVGR I+LRDS+RFHHFN G+CSCGDYW
Sbjct: 646 EDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 250/530 (47%), Gaps = 67/530 (12%)

Query: 31  VRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
           VR  +L +A  LFD+MP+R+ VSW  ++SGY   G   EA ++F EM             
Sbjct: 41  VRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM------------- 87

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
                C+                        + +  N ++A Y       D ARR+FE  
Sbjct: 88  ----PCK------------------------NSISWNGMLAAYVQNGRIED-ARRLFESK 118

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSSV 208
              +LISWN ++  Y +R   +    +F RM           +E ++ ++I+  A    +
Sbjct: 119 ADWELISWNCMMGGYVKRNRLVDARGIFDRMPER--------DEVSWNTMISGYAQNGEL 170

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
           L    L ++          + D++  +A+VSG+ + G    AR++F+ M +KN VS N +
Sbjct: 171 LEAQRLFEE--------SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAI 222

Query: 269 MEGRRKGKEVHGY--LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
           + G  + K +     L  +     V+  N ++  YA+ G I  +R+ F  M  +DS+SW 
Sbjct: 223 IAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWA 282

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            +I+G  Q+G  EEA+  F  M+RDG   +  +  STLS+CA +  + LG+Q+HG  +K 
Sbjct: 283 AIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKA 342

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
           GL+S   V NALL +Y   G +     VF  + E + VSWN++I  +A       EA+  
Sbjct: 343 GLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYA-RHGFGKEALML 401

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYG 505
           +  M++ G  P+ VT + +L+A S   +   G +  ++    Y +   +     ++   G
Sbjct: 402 FESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLG 461

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMI-SGYIH--NELLPKAMNLVWFM 552
           + G +DD + +   M    D  +W +++ +  IH   EL  KA  +++ M
Sbjct: 462 RAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEM 511



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 139/292 (47%), Gaps = 14/292 (4%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           NT+I  Y + GD+A A   FD MP R+S+SWA I++GY   G   EA  +F EM R G  
Sbjct: 251 NTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGER 310

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           LNR    S L  C E   +  + G QVH  V+K+       V N L+ MY  C  + D A
Sbjct: 311 LNRSTFTSTLSTCAEI--AALELGKQVHGRVVKAGLESGCYVGNALLVMYCKC-GNIDDA 367

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
             +FE IE ++++SWN++I+ Y++ G       LF  M++ G    + P++ T   +++A
Sbjct: 368 YIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTG----ILPDDVTMVGVLSA 423

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNV 262
              + L      +   +M +  G+ ++    + ++    R G    A+ + + M  + + 
Sbjct: 424 CSHTGLVDKG-TEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDA 482

Query: 263 VSMNGLMEGRR-KGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDD 309
            +   L+   R  G    G      +F+M    +G    L N+YA  G   D
Sbjct: 483 ATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGD 534



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 154/332 (46%), Gaps = 34/332 (10%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           NT+I+ Y + G+L  A +LF+E P R+  +W  +VSGY   GM +EA ++F  M      
Sbjct: 158 NTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK--- 214

Query: 84  LNRYALGSVLRACQECG--PSGFKFGMQVHCLVLKS-NQTFDGLVSNVLIAMYGSCLEST 140
            N  +  +++    +C       +    + C  + S N    G   N  IA         
Sbjct: 215 -NSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQ-------- 265

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
             AR  F+ +  RD ISW +II+ Y+Q G       LF  M+R+G R     N  TF S 
Sbjct: 266 --ARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERL----NRSTFTST 319

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
           ++    + ++   L +Q+   V KAGL S  YVG+AL+  + + GN   A  +FE + +K
Sbjct: 320 LSTC--AEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEK 377

Query: 261 NVVSMNGLMEGRRK---GKE---VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
            VVS N ++ G  +   GKE   +   + ++G+        G+++  +  G +D     F
Sbjct: 378 EVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYF 437

Query: 315 RFM-----IGKDSVSWNTMISGLDQNGCYEEA 341
             M     I  +S  +  MI  L + G  ++A
Sbjct: 438 YSMTQDYGITANSKHYTCMIDLLGRAGRLDDA 469



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 50/97 (51%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H +++K G     ++ N L+ +Y + G++  A  +F+ + ++  VSW  +++GY  
Sbjct: 332 GKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYAR 391

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G   EA  +F+ M + G L +   +  VL AC   G
Sbjct: 392 HGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTG 428


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 261/665 (39%), Positives = 399/665 (60%), Gaps = 12/665 (1%)

Query: 277 EVHGYLIRSGLFDMVAVGNG-LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           ++H   +R GL       +G LV+ Y + G I ++  VF  M  +D  +WN M+SGL +N
Sbjct: 88  QLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRN 147

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
               EA+  F  M  +G+     ++ S L  C  LG  +L   +H   +K GLD ++ V 
Sbjct: 148 ARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVC 207

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           NAL+ +Y   G L     VF  M   D V+WNS+I    +     + A+K +  MR +G 
Sbjct: 208 NALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISG-CEQRGQTAAALKMFQGMRGSGV 266

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE-NALLSCYGKCGEMDDCE 514
           SP+ +T +++ +A +    G+    +H  V++     +  I  NA++  Y K   ++  +
Sbjct: 267 SPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQ 326

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR-GQRLDHFTFATVLSACAS 573
           ++F  M  + D VSWN++I+GY+ N L  +A+     M +  G +    TF +VL A + 
Sbjct: 327 RMFDSMPVQ-DSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSH 385

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           +  L++GM +HA  ++  L  DV +G+ L+D+Y+KCG++  A   F+ MP R+   WN++
Sbjct: 386 LGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAI 445

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           ISG   HGHG +ALTLFS+M+ +G  PDHVTFV +L+ACSHAGLVD+G   F  M   Y 
Sbjct: 446 ISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYD 505

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGR 752
           ++P  + ++CM D+LGRAG+LD+   FI  MPI P+S +W  +LGAC    N    E+G+
Sbjct: 506 IVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGN---VEMGK 562

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
            A+  LFE++P+N   YVL++NMYA  GKW+ V + R  ++   ++K  G S + +K  V
Sbjct: 563 VASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSV 622

Query: 813 HVFVAGD--ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
           +VF +G+  E HP+ + I  +L+ L  K+R  GYV    F L D+E + KE +++ HSE+
Sbjct: 623 NVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSER 682

Query: 871 IAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +A+AF ++   S+ P+ I KNLRVCGDCH+A K+IS+I  REI++RDSNRFHHF DG CS
Sbjct: 683 LAIAFGIINTPSRTPLHIYKNLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKDGHCS 742

Query: 930 CGDYW 934
           CGD+W
Sbjct: 743 CGDFW 747



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 250/533 (46%), Gaps = 61/533 (11%)

Query: 159 NSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQI 218
           N++I+ +S+       F L   +      Y  +P+ +TF SLI AA S+  +      Q+
Sbjct: 37  NTLIAAFSRAALPRLAFPLLRHIL--SCAYPFRPDGFTFPSLIRAAPSNASAA-----QL 89

Query: 219 LAMVKKAGLL-SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME------- 270
            A   + GL+   ++   +LV  + R G    A K+F++M +++V + N ++        
Sbjct: 90  HACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNAR 149

Query: 271 --------GRRKGKEV--------------------------HGYLIRSGLFDMVAVGNG 296
                   GR  G+ V                          H Y ++ GL   + V N 
Sbjct: 150 AAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNA 209

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           L+++Y K G +++++ VF  M  +D V+WN++ISG +Q G    A+  F  MR  G+   
Sbjct: 210 LIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPD 269

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD-SDVSVSNALLSLYADAGYLSRCLKVF 415
             +L+S  S+ A  G     + +H   ++ G D  D+   NA++ +YA    +    ++F
Sbjct: 270 VLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMF 329

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR-AGWSPNGVTFINILAAASSFSM 474
             MP  D VSWN++I  +  +  L +EAV+ Y  M++  G      TF+++L A S    
Sbjct: 330 DSMPVQDSVSWNTLITGYMQN-GLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGA 388

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            + G ++HA  IK  +  +  +   L+  Y KCG++ +   +F +M  RR    WN++IS
Sbjct: 389 LQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMP-RRSTGPWNAIIS 447

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           G   +    +A+ L   M Q G + DH TF ++L+AC+    +++G           + +
Sbjct: 448 GLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDV---MQVTY 504

Query: 595 DVVI----GSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGH 642
           D+V      + + DM  + G++D A  F   MP++ +   W +++     HG+
Sbjct: 505 DIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGN 557



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 208/461 (45%), Gaps = 60/461 (13%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           VF   +L++ Y+R G ++ A K+FDEM +R+  +W  ++SG      + EA  +F  MV 
Sbjct: 103 VFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVG 162

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC--L 137
            G   +   + SVL  C   G       M  H   +K     +  V N LI +YG    L
Sbjct: 163 EGVAGDTVTVSSVLPMCVLLGDQVLALVM--HVYAVKHGLDKELFVCNALIDVYGKLGML 220

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
           E   C   +F  +E RDL++WNSIIS   QRG T +  K+F  M+  G    + P+  T 
Sbjct: 221 EEAQC---VFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSG----VSPDVLTL 273

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            SL +A        S        M ++   + D+  G+A+V  +A+L N   A+++F+ M
Sbjct: 274 VSLASAIAQGGDGRSAKSLHCYVM-RRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSM 332

Query: 258 IQKNVVSMNGLMEGR------------------------------------------RKG 275
             ++ VS N L+ G                                           ++G
Sbjct: 333 PVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQG 392

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
             +H   I+ GL   V VG  L+++YAKCG + ++  +F  M  + +  WN +ISGL  +
Sbjct: 393 MRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVH 452

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G   EA+  F  M+++G+   + + +S L++C+  G +  G+    + +++  D  V ++
Sbjct: 453 GHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFF-DVMQVTYDI-VPIA 510

Query: 396 N---ALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                +  +   AG L         MP + D   W +++GA
Sbjct: 511 KHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGA 551



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 163/325 (50%), Gaps = 23/325 (7%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A + H+  +KHG   ++F+CN LI+VY ++G L  A  +F  M  R+ V+W  I+SG   
Sbjct: 188 ALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQ 247

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           +G +  A KMF+ M  +G   +   L S+  A  + G    +    +HC V++     D 
Sbjct: 248 RGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDG--RSAKSLHCYVMRRGWDVDD 305

Query: 124 LVS-NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
           +++ N ++ MY   L + + A+R+F+ +  +D +SWN++I+ Y Q G      + +  MQ
Sbjct: 306 IIAGNAIVDMYAK-LSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQ 364

Query: 183 R-EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVGSALV 238
           + EG    LK  + TF S++  AYS + +    LQQ   + A+  K GL  D+YVG+ L+
Sbjct: 365 KHEG----LKAIQGTFVSVLP-AYSHLGA----LQQGMRMHALSIKIGLNVDVYVGTCLI 415

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGLFDMVAVGN 295
             +A+ G    A  +FE+M +++    N ++ G      G E      R     +     
Sbjct: 416 DLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHV 475

Query: 296 GLVNMYAKC---GTIDDSRSVFRFM 317
             V++ A C   G +D  RS F  M
Sbjct: 476 TFVSLLAACSHAGLVDQGRSFFDVM 500


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 292/838 (34%), Positives = 451/838 (53%), Gaps = 55/838 (6%)

Query: 137  LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
            L ST C    F         + N+ I+ + + GD  +  +L ++ +     Y L  N Y 
Sbjct: 318  LHSTVCVSPSFTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKS----YELGLNSYC 373

Query: 197  FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
                + A   S+  G    +++ +++   G+  D  +G+ LV  +   G+    RKIF++
Sbjct: 374  SVLQLCAEKKSLEDG----KRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDK 429

Query: 257  MIQKNVVSMNGLME----------------------------------------GR-RKG 275
            ++   V   N LM                                         G+ ++ 
Sbjct: 430  IMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKEC 489

Query: 276  KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
            K VHGY+++ G     AV N L+  Y K G ++ + ++F  +   D VSWN+MI+G   N
Sbjct: 490  KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVN 549

Query: 336  GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
            G     +  F  M   G+     +L+S L + A++G + LG+ +HG G+K     +V  S
Sbjct: 550  GFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFS 609

Query: 396  NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
            N LL +Y+  G L+   +VF  M +   VSW S I A+   E L S+A+  + +M+  G 
Sbjct: 610  NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYV-REGLYSDAIGLFDEMQSKGV 668

Query: 456  SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
             P+  T  +I+ A +  S    G  VH+ VIK  + +   + NAL++ Y KCG +++   
Sbjct: 669  RPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARL 728

Query: 516  IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
            +F+++   +D VSWN+MI GY  N L  +A+ L +  MQ+  + D  T A VL ACA +A
Sbjct: 729  VFSKIP-VKDIVSWNTMIGGYSQNSLPNEALEL-FLDMQKQFKPDDITMACVLPACAGLA 786

Query: 576  TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
             L++G E+H   +R     D+ +  ALVDMY+KCG +  A   FD++P +++ SW  MI+
Sbjct: 787  ALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIA 846

Query: 636  GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
            GY  HG G++A++ F++M++ G  PD  +F  +L+ACSH+GL++EG+K F SM    G+ 
Sbjct: 847  GYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVE 906

Query: 696  PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
            P+LE ++C+VDLL R G L K  +FI  MPI P++ IW  +L   CR +    +L  K A
Sbjct: 907  PKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSG-CRIH-HDVKLAEKVA 964

Query: 756  NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
              +FE+EP N   YV+LAN+YA   KWE+V K RK M++   K+  GCSW+ +    ++F
Sbjct: 965  EHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIF 1024

Query: 816  VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
            VAG+  HP+   I   L++L  +M++  Y    ++ L + +   KE +   HSEK A+AF
Sbjct: 1025 VAGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAF 1084

Query: 876  -VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
             +L       +R+ KN RVCGDCH   KF+SK   REIVLRDSNRFHHF DG CSC D
Sbjct: 1085 GILNLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142



 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 161/585 (27%), Positives = 267/585 (45%), Gaps = 58/585 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +D K  H  I+ +G + D  L   L+ +YV  GDL    K+FD++ +     W  ++S Y
Sbjct: 386 EDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEY 445

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   E+  +FK+M + G + N Y    VL+     G    K   +VH  VLK     
Sbjct: 446 AKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGK--VKECKRVHGYVLKLGFGS 503

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V N LIA Y       + A  +F+E+   D++SWNS+I+     G + +  ++F +M
Sbjct: 504 NTAVVNSLIAAYFK-FGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQM 562

Query: 182 QREGFRYSLKP----------------NEYTFGSLITAAYSSVLSGSYLLQQILAMVKKA 225
              G    L                       G  + A +S  +  S     +L M  K 
Sbjct: 563 LILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFS---NTLLDMYSKC 619

Query: 226 GLL---SDLYVG---------SALVSGFARLGNFYYARKIFEQMIQKNV----------V 263
           G L   ++++V          ++ ++ + R G +  A  +F++M  K V          V
Sbjct: 620 GNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIV 679

Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                     KG++VH Y+I++G+   + V N L+NMYAKCG+++++R VF  +  KD V
Sbjct: 680 HACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIV 739

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SWNTMI G  QN    EA+  F  M++      + ++   L +CA L  +  G++IHG  
Sbjct: 740 SWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHI 798

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           L+ G  SD+ V+ AL+ +YA  G L     +F ++P+ D +SW  +I  +       +EA
Sbjct: 799 LRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYG-MHGFGNEA 857

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL--- 500
           +  + +MR AG  P+  +F  IL A S   +   G +        ++ NE  +E  L   
Sbjct: 858 ISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFN-----SMRNECGVEPKLEHY 912

Query: 501 ---LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
              +    + G +    K    M  + D   W  ++SG  IH+++
Sbjct: 913 ACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDV 957


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 269/724 (37%), Positives = 405/724 (55%), Gaps = 44/724 (6%)

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
           GN   A    E  +  N+V    LM+     + V   + +  LF      N L+  Y+K 
Sbjct: 30  GNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSW----NNLLLAYSKA 85

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS---LI 361
           G I +  S F  +  +D V+WN +I G   +G    A+  +  M RD   S+N +   L+
Sbjct: 86  GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD--FSANLTRVTLM 143

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-- 419
           + L   +S G + LG+QIHG+ +KLG +S + V + LL +YA+ G +S   KVF+ +   
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203

Query: 420 ----------------------------EHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
                                       E D VSW ++I   A +  L  EA++ + +M+
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQN-GLAKEAIECFREMK 262

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             G   +   F ++L A         G Q+HA +I+ N  +   + +AL+  Y KC  + 
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLH 322

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
             + +F RM ++++ VSW +M+ GY       +A+ +   M + G   DH+T    +SAC
Sbjct: 323 YAKTVFDRM-KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           A+V++LE G + H   + + L   V + ++LV +Y KCG ID ++R F+ M VR+  SW 
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWT 441

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           +M+S YA+ G   + + LF +M   G  PD VT  GV+SACS AGLV++G ++FK M+  
Sbjct: 442 AMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSE 501

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
           YG++P +  +SCM+DL  R+G L++   FIN MP  P+++ W T+L AC   N    E+G
Sbjct: 502 YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC--RNKGNLEIG 559

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
           + AA  L E++P +   Y LL+++YAS GKW+ VA+ R+ M+E  VKKE G SW+  K  
Sbjct: 560 KWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGK 619

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
           +H F A DES P  D IY KL+ELN K+ D GY P T F   D+E   K  +++YHSE++
Sbjct: 620 LHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERL 679

Query: 872 AVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           A+AF ++   S  PIR+ KNLRVC DCH+A K IS + GREI++RD+ RFH F DG CSC
Sbjct: 680 AIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSC 739

Query: 931 GDYW 934
           GD+W
Sbjct: 740 GDFW 743



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 162/564 (28%), Positives = 270/564 (47%), Gaps = 67/564 (11%)

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
           +H  ++++    +  + N ++  Y + ++S+  ARR+F+ I   +L SWN+++  YS+ G
Sbjct: 28  IHGNIIRALPYPETFLYNNIVHAY-ALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAG 86

Query: 170 DTISVFKLFSRM-QREGFRYSLKPNEYTFGSLITAA----------YSSVLSGSYLL--- 215
               +   F ++  R+G  +++    Y+   L+ AA          +S+ L+   L+   
Sbjct: 87  LISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTML 146

Query: 216 ------------QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
                       +QI   V K G  S L VGS L+  +A +G    A+K+F  +  +N V
Sbjct: 147 KLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTV 206

Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
             N LM G                                CG I+D+  +FR M  KDSV
Sbjct: 207 MYNSLMGG-----------------------------LLACGMIEDALQLFRGM-EKDSV 236

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SW  MI GL QNG  +EAI  F  M+  GL    +   S L +C  LG I  G+QIH   
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           ++      + V +AL+ +Y     L     VF  M + + VSW +++  +  +     EA
Sbjct: 297 IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQT-GRAEEA 355

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           VK +LDM+R+G  P+  T    ++A ++ S  + G Q H + I   + +  T+ N+L++ 
Sbjct: 356 VKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTL 415

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           YGKCG++DD  ++F  M+  RD VSW +M+S Y       + + L   M+Q G + D  T
Sbjct: 416 YGKCGDIDDSTRLFNEMNV-RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVT 474

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVV--IG--SALVDMYSKCGRIDYASRFF 619
              V+SAC+    +E+G            E+ +V  IG  S ++D++S+ GR++ A RF 
Sbjct: 475 LTGVISACSRAGLVEKGQRYFKLMTS---EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFI 531

Query: 620 DLMPV-RNVYSWNSMISGYARHGH 642
           + MP   +   W +++S     G+
Sbjct: 532 NGMPFPPDAIGWTTLLSACRNKGN 555



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 127/494 (25%), Positives = 213/494 (43%), Gaps = 95/494 (19%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           ++F  N L+  Y + G ++     F+++PDR+ V+W  ++ GY+  G+   A K +  M+
Sbjct: 71  NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130

Query: 79  RA-GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
           R     L R  L ++L+     G      G Q+H  V+K       LV + L+ MY +  
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGH--VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188

Query: 138 ESTDCARRIFEEIETR------------------------------DLISWNSIISVYSQ 167
             +D A+++F  ++ R                              D +SW ++I   +Q
Sbjct: 189 CISD-AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQ 247

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKA 225
            G      + F  M+ +G    LK ++Y FGS++ A     ++  G    +QI A + + 
Sbjct: 248 NGLAKEAIECFREMKVQG----LKMDQYPFGSVLPACGGLGAINEG----KQIHACIIRT 299

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------- 272
                +YVGSAL+  + +    +YA+ +F++M QKNVVS   ++ G              
Sbjct: 300 NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF 359

Query: 273 ----------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
                                        +G + HG  I SGL   V V N LV +Y KC
Sbjct: 360 LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC 419

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G IDDS  +F  M  +D+VSW  M+S   Q G   E I  F  M + GL     +L   +
Sbjct: 420 GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVI 479

Query: 365 SSCASLGWIMLGQQIHGEGLKL-----GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           S+C+  G +  GQ+      KL     G+   +   + ++ L++ +G L   ++    MP
Sbjct: 480 SACSRAGLVEKGQRY----FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP 535

Query: 420 -EHDQVSWNSVIGA 432
              D + W +++ A
Sbjct: 536 FPPDAIGWTTLLSA 549



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 201/447 (44%), Gaps = 60/447 (13%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRN------------- 50
            K  H Q++K GF   + + + L+ +Y  VG ++ A K+F  + DRN             
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217

Query: 51  -----------------SVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVL 93
                            SVSWA ++ G    G++ EA + F+EM   G  +++Y  GSVL
Sbjct: 218 CGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277

Query: 94  RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
            AC   G      G Q+H  ++++N      V + LI MY  C +    A+ +F+ ++ +
Sbjct: 278 PACGGLG--AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC-KCLHYAKTVFDRMKQK 334

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA--YSSVLSG 211
           +++SW +++  Y Q G      K+F  MQR G    + P+ YT G  I+A    SS+  G
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG----IDPDHYTLGQAISACANVSSLEEG 390

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           S    Q       +GL+  + V ++LV+ + + G+   + ++F +M  ++ VS   ++  
Sbjct: 391 S----QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSA 446

Query: 272 RRK-GKEVHGY-----LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV-- 323
             + G+ V        +++ GL        G+++  ++ G ++  +  F+ M  +  +  
Sbjct: 447 YAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVP 506

Query: 324 ---SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
               ++ MI    ++G  EEA+     M             + LS+C + G + +G+   
Sbjct: 507 SIGHYSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKGNLEIGKWA- 562

Query: 381 GEGLKLGLDSDVSVSNALL-SLYADAG 406
            E L + LD        LL S+YA  G
Sbjct: 563 AESL-IELDPHHPAGYTLLSSIYASKG 588



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 125/257 (48%), Gaps = 12/257 (4%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H  I++  F   +++ + LI++Y +   L  A  +FD M  +N VSW  +V GY 
Sbjct: 288 EGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYG 347

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G + EA K+F +M R+G   + Y LG  + AC     S  + G Q H   + S     
Sbjct: 348 QTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV--SSLEEGSQFHGKAITSGLIHY 405

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             VSN L+ +YG C +  D + R+F E+  RD +SW +++S Y+Q G  +   +LF +M 
Sbjct: 406 VTVSNSLVTLYGKCGDIDD-STRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMV 464

Query: 183 REGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           + G    LKP+  T   +I+A   +  V  G    +    M  + G++  +   S ++  
Sbjct: 465 QHG----LKPDGVTLTGVISACSRAGLVEKGQRYFK---LMTSEYGIVPSIGHYSCMIDL 517

Query: 241 FARLGNFYYARKIFEQM 257
           F+R G    A +    M
Sbjct: 518 FSRSGRLEEAMRFINGM 534



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 23/180 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++   FH + +  G  + V + N+L+ +Y + GD+  +++LF+EM  R++VSW  +VS Y
Sbjct: 388 EEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAY 447

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G + E  ++F +MV+ G   +   L  V+ AC   G            LV K  + F
Sbjct: 448 AQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG------------LVEKGQRYF 495

Query: 122 D------GLVSNV-----LIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD 170
                  G+V ++     +I ++       +  R I       D I W +++S    +G+
Sbjct: 496 KLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 18/233 (7%)

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
           +H   +RA    +  + + +V  Y+      YA R FD +P  N++SWN+++  Y++ G 
Sbjct: 28  IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGL 87

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
             +  + F ++    P  D VT+  ++   S +GLV    K + +M + +          
Sbjct: 88  ISEMESTFEKL----PDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLM 143

Query: 703 CMVDLLGRAGELD---KIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            M+ L    G +    +I   + K+      L+   +L       C        A  + +
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCIS-----DAKKVFY 198

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
            ++ +N V Y  L     + G  ED  +  + M++  V      SW  M  G+
Sbjct: 199 GLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV------SWAAMIKGL 245


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 256/731 (35%), Positives = 426/731 (58%), Gaps = 20/731 (2%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN--------- 266
           QQ+  ++++     D++  + ++  + + G++  A  +F QM +++V+            
Sbjct: 59  QQVFEILER----KDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNA 114

Query: 267 -GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
               E  + G E+HG +++ G    V VG  L+NMY KCG++  +   F+ +  +D VSW
Sbjct: 115 CASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSW 174

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
             MI+   Q+  +  A   +  M+ DG++ +  +L +  ++     ++  G+ ++G    
Sbjct: 175 TAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSS 234

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
             ++SDV V N+ ++++ +AG L    ++F  M + D V+WN VI  +  +E    EAV+
Sbjct: 235 GVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENF-GEAVR 293

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            +  +++ G   N +TF+ +L   +S +    G  +H  V +     +  +  AL+S YG
Sbjct: 294 LFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYG 353

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           +C       KIF  M  + D ++W  M   Y  N    +A+ L   M   G+R    T  
Sbjct: 354 RCEAPGQAWKIFVDMGSK-DVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLV 412

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
            VL  CA +A L++G ++H+  +      ++V+ +AL++MY KCG++  A   F+ M  R
Sbjct: 413 AVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKR 472

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
           ++  WNSM+  YA+HG+ D+ L LF+QM+LDG   D V+FV VLSA SH+G V +G+++F
Sbjct: 473 DILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYF 532

Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP-ITPNSLIWRTVLGACCRAN 744
            +M Q + + P  E + C+VDLLGRAG + +  + + K+    P+ ++W T+LGAC   N
Sbjct: 533 VAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHN 592

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
             KT+  + AA  + E +P ++  YV+L+N+YA+ G W+ V + RK M+   VKKE G S
Sbjct: 593 --KTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRS 650

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLV 864
            + + + VH F+ GD SHP +  IY +L  LN +MR AGY+P TK  L D+E E KED++
Sbjct: 651 SIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDML 710

Query: 865 SYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
            YHSE++A+AF +++     P+R++KNLRVC DCH+A K+ISK+ GREI++RD++RFH+F
Sbjct: 711 FYHSERLAIAFGLISTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNF 770

Query: 924 NDGKCSCGDYW 934
            DG+CSC DYW
Sbjct: 771 KDGRCSCKDYW 781



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 234/466 (50%), Gaps = 6/466 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+ VH ++   G      V   L+ MYA+CG++ +++ VF  +  KD  +W  MI    Q
Sbjct: 23  GRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQ 82

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G Y+ A+  F  M+ + +M +  + ++ L++CAS   +  G +IHG+ L+ G + DV V
Sbjct: 83  QGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFV 142

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             AL+++Y   G +      F  +   D VSW ++I A    +   + A   Y  M+  G
Sbjct: 143 GTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQF-ALARWLYRRMQLDG 201

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             PN +T   +  A    +    G  V+  V    + ++  + N+ ++ +G  G + D  
Sbjct: 202 VVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDAR 261

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           ++F  M + RD V+WN +I+ Y+ NE   +A+ L   + Q G + +  TF  +L+   S+
Sbjct: 262 RLFEDMVD-RDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSL 320

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
            +L +G  +H     A  + D V+ +AL+ +Y +C     A + F  M  ++V +W  M 
Sbjct: 321 TSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMC 380

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYG 693
             YA++G   +AL LF +M+L+G  P   T V VL  C+H   + +G + H   +   + 
Sbjct: 381 VAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFR 440

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           +   +E  + ++++ G+ G++ +      KM    + L+W ++LGA
Sbjct: 441 MEMVVE--TALINMYGKCGKMAEAMSVFEKMA-KRDILVWNSMLGA 483



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 131/558 (23%), Positives = 250/558 (44%), Gaps = 56/558 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +   GF  +  +C  LI +Y + G +  A ++F+ +  ++  +W  ++  Y  +G  
Sbjct: 27  HWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDY 86

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           + A  MF +M     +  +    ++L AC        K GM++H  +L+     D  V  
Sbjct: 87  DRALGMFYQMQEEDVMPTKVTYVAILNAC--ASTESLKDGMEIHGQILQQGFEGDVFVGT 144

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI MY  C  S   A   F+ +E RD++SW ++I+   Q         L+ RMQ +G  
Sbjct: 145 ALINMYNKC-GSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDG-- 201

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQ--ILAMVKKAGLLSDLYVGSALVSGFARLG 245
             + PN+ T  ++  A        +YL +   +  +V    + SD+ V ++ V+ F   G
Sbjct: 202 --VVPNKITLYTVFNAYGDP----NYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAG 255

Query: 246 NFYYARKIFEQMIQKNVVSMNGLME---------------GR------------------ 272
               AR++FE M+ ++VV+ N ++                GR                  
Sbjct: 256 LLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLN 315

Query: 273 --------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                    KGK +H  +  +G      V   L+++Y +C     +  +F  M  KD ++
Sbjct: 316 VYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVIT 375

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W  M     QNG  +EA+  F  M+ +G   ++ +L++ L +CA L  +  G+QIH   +
Sbjct: 376 WTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHII 435

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           +     ++ V  AL+++Y   G ++  + VF  M + D + WNS++GA+A       E +
Sbjct: 436 ENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYA-QHGYYDETL 494

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSC 503
           + +  M+  G   + V+F+++L+A S       G+Q    +++ +++     +   ++  
Sbjct: 495 QLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDL 554

Query: 504 YGKCGEMDDCEKIFARMS 521
            G+ G + +   I  ++S
Sbjct: 555 LGRAGRIQEAVDIVLKLS 572



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 224/477 (46%), Gaps = 57/477 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           KD    H QIL+ GF  DVF+   LIN+Y + G +  A   F  +  R+ VSW  +++  
Sbjct: 122 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 181

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                   A  +++ M   G + N+  L +V  A  +  P+    G  V+ LV       
Sbjct: 182 VQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGD--PNYLSEGKFVYGLVSSGVMES 239

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V N  + M+G+     D ARR+FE++  RD+++WN +I++Y Q  +     +LF R+
Sbjct: 240 DVRVMNSAVNMFGNAGLLGD-ARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRL 298

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           Q++G    +K N+ TF  L+   Y+S+ S +   + I  +VK+AG   D  V +AL+S +
Sbjct: 299 QQDG----VKANDITF-VLMLNVYTSLTSLAK-GKVIHELVKEAGYDRDAVVATALMSLY 352

Query: 242 ARLGNFYYARKIFEQMIQKNVVS---------MNGL------------MEGRR------- 273
            R      A KIF  M  K+V++          NG             +EGRR       
Sbjct: 353 GRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLV 412

Query: 274 -------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                        KG+++H ++I +     + V   L+NMY KCG + ++ SVF  M  +
Sbjct: 413 AVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKR 472

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D + WN+M+    Q+G Y+E +  F  M+ DG+ +   S +S LS+ +  G +  G Q  
Sbjct: 473 DILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYF 532

Query: 381 GEGLK-LGLDSDVSVSNALLSLYADAGYLSRC----LKVFFLMPEHDQVSWNSVIGA 432
              L+   +     +   ++ L   AG +       LK+   +P  D + W +++GA
Sbjct: 533 VAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLP--DGILWMTLLGA 587



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 163/359 (45%), Gaps = 32/359 (8%)

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P+   F+ +L   SS      G +VH  V          +   L+  Y +CG + + +++
Sbjct: 2   PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F  + ER+D  +W  MI  Y       +A+ + + M +        T+  +L+ACAS  +
Sbjct: 62  F-EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           L+ GME+H   ++   E DV +G+AL++MY+KCG +  A   F  +  R+V SW +MI+ 
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI- 695
             +H     A  L+ +M+LDG +P+ +T   V +A      + EG         VYGL+ 
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEG-------KFVYGLVS 233

Query: 696 -----PQLEQFSCMVDLLGRAGELDK----IEEFINKMPITPNSLIWRTV----LGACCR 742
                  +   +  V++ G AG L       E+ +++  +T N +I   V     G   R
Sbjct: 234 SGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVR 293

Query: 743 ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA 801
              R  + G KA          N + +VL+ N+Y S           + +KEA   ++A
Sbjct: 294 LFGRLQQDGVKA----------NDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDA 342



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 150/311 (48%), Gaps = 2/311 (0%)

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
            ++ L  C+S   +  G+++H      G + +  V   L+ +YA  G +    +VF ++ 
Sbjct: 7   FVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE 66

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             D  +W  +IG +   +     A+  +  M+     P  VT++ IL A +S    K G 
Sbjct: 67  RKDVFAWTRMIGIYC-QQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGM 125

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           ++H Q+++     +  +  AL++ Y KCG +      F R+ E RD VSW +MI+  + +
Sbjct: 126 EIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL-EHRDVVSWTAMIAACVQH 184

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
           +    A  L   M   G   +  T  TV +A      L  G  V+       +E DV + 
Sbjct: 185 DQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVM 244

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           ++ V+M+   G +  A R F+ M  R+V +WN +I+ Y ++ +  +A+ LF +++ DG  
Sbjct: 245 NSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVK 304

Query: 660 PDHVTFVGVLS 670
            + +TFV +L+
Sbjct: 305 ANDITFVLMLN 315


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 280/823 (34%), Positives = 444/823 (53%), Gaps = 87/823 (10%)

Query: 191 KPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
           +P+  TF +++ +  S   V  G  L ++I    + +    D  VG+AL+S + +  +  
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVAEGRALHERI----RCSRFERDTMVGNALISMYGKCDSLV 59

Query: 249 YARKIFEQM--IQKNVVSMNGLMEGRRK-------------------------------- 274
            AR +FE M   Q+NVVS N ++    +                                
Sbjct: 60  DARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGA 119

Query: 275 ------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
                 G+E+H  +  SGL    ++ N LV MYA+ G++ D++ +F+ +  +D  SWN +
Sbjct: 120 CSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAV 179

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           I    Q+G +  A+  F  M+ D +  ++ + I+ +S  ++   +  G++IH E +  G 
Sbjct: 180 ILAHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           DSD+ V+ AL+++Y   G      +VF  M + D VSWN +IG +  +     EA++ Y 
Sbjct: 239 DSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDF-HEALELYQ 297

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            +   G+     TF++IL A SS      G  VH+ +++  + +E  +  AL++ Y KCG
Sbjct: 298 KLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCG 357

Query: 509 EMDDCEKIFARMSER---------------------------------RDEVSWNSMISG 535
            +++  K+F  M  R                                 RD + WN+MI+ 
Sbjct: 358 SLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITT 417

Query: 536 YIHNELLPKAMNLVWFMM-QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           Y+ N     AM +   M    G + D  TF  VL ACAS+  L     +HA    + LE 
Sbjct: 418 YVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELES 477

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           +VV+ + L++MY++CG ++ A R F     + V SW +M++ ++++G   +AL LF +M 
Sbjct: 478 NVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMD 537

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
           L+G  PD VT+  +L  C+H G +++G+++F  M++++GL P  + F+ MVDLLGR+G L
Sbjct: 538 LEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRL 597

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
              +E +  MP  P+ + W T L A CR +  K ELG  AA  ++E++P +   Y+ ++N
Sbjct: 598 FDAKELLESMPFEPDPVAWMTFLTA-CRIH-GKLELGEAAAERVYELDPSSTAPYIAMSN 655

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           +YA+ G WE VA  RK M+E  +KK  G S++ +   +H F +G + HP  D I E+L  
Sbjct: 656 IYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTR 715

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF--VLTRNSKLPIRIMKNLR 892
           L+  MR AGYVP TK  L D+    KE ++ YHSEK+A+AF  V +R S  PIR++KNLR
Sbjct: 716 LHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLR 775

Query: 893 VCGDCHSAFKFISKIVGREIVLRDSNRFHHF-NDGKCSCGDYW 934
           VC DCH+A KFI++I GR+I+LRD NRFH F +DGKCSCGDYW
Sbjct: 776 VCSDCHTATKFIARIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818



 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 174/637 (27%), Positives = 305/637 (47%), Gaps = 107/637 (16%)

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           +VL +C  CG      G  +H  +  S    D +V N LI+MYG C    D AR +FE +
Sbjct: 12  TVLCSCSSCGD--VAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVD-ARSVFESM 68

Query: 151 E--TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
           +   R+++SWN++I+ Y+Q G +     L+ RM  +G    L  +  TF S++ A  SS+
Sbjct: 69  DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQG----LGTDHVTFVSVLGAC-SSL 123

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
             G    ++I   V  +GL S   + +ALV+ +AR G+   A+++F+ +  ++  S N +
Sbjct: 124 AQG----REIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAV 179

Query: 269 M----------------------------------------EGRRKGKEVHGYLIRSGLF 288
           +                                        E   +G+++H  ++ +G  
Sbjct: 180 ILAHSQSGDWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
             + V   L+NMY KCG+  ++R VF  M  +D VSWN MI    QNG + EA+  +  +
Sbjct: 240 SDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKL 299

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
             +G   +  + +S L +C+S+  +  G+ +H   L+ GLDS+V+V+ AL+++YA  G L
Sbjct: 300 DMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSL 359

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADS------------------------EALVSE-- 442
               KVF  M   D V+W+++IGA+A +                         A+++   
Sbjct: 360 EEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYV 419

Query: 443 -------AVKYYLDMR-RAGWSPNGVTFINILAAASSFSMGKLGH--QVHAQVIKYNVAN 492
                  A+K + +M   AG  P+ VTFI +L A +  S+G+L     +HAQ+ +  + +
Sbjct: 420 QNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACA--SLGRLSEVKALHAQISESELES 477

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
              + N L++ Y +CG +++ E++FA   E +  VSW +M++ +       +A++L   M
Sbjct: 478 NVVVTNTLINMYARCGSLEEAERLFAAAKE-KTVVSWTAMVAAFSQYGRYAEALDLFQEM 536

Query: 553 MQRGQRLDHFTFATVLSACASVATLERG-------MEVHACGVRACLEFDVVIGSALVDM 605
              G + D  T+ ++L  C    +LE+G        E+H     A   F     +A+VD+
Sbjct: 537 DLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTA-DHF-----AAMVDL 590

Query: 606 YSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHG 641
             + GR+  A    + MP   +  +W + ++    HG
Sbjct: 591 LGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHG 627



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 167/621 (26%), Positives = 285/621 (45%), Gaps = 98/621 (15%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVSG 60
           + +  H +I    F  D  + N LI++Y +   L  A  +F+ M    RN VSW  +++ 
Sbjct: 25  EGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAA 84

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN-Q 119
           Y   G S EA  ++  M   G   +     SVL AC     S    G ++H  V  S   
Sbjct: 85  YAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC-----SSLAQGREIHNRVFYSGLD 139

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           +F  L +N L+ MY     S   A+R+F+ ++TRD  SWN++I  +SQ GD     ++F 
Sbjct: 140 SFQSL-ANALVTMYAR-FGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFK 197

Query: 180 RMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
            M     +  +KPN  T+ ++I+  +   VL      ++I A +   G  SDL V +AL+
Sbjct: 198 EM-----KCDMKPNSTTYINVISGFSTPEVLPEG---RKIHAEIVANGFDSDLVVATALI 249

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGL---------------------MEGRRK--- 274
           + + + G+ + AR++F++M ++++VS N +                     MEG ++   
Sbjct: 250 NMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKA 309

Query: 275 -----------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                            G+ VH +++  GL   VAV   LVNMYAKCG+++++R VF  M
Sbjct: 310 TFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAM 369

Query: 318 IGKDSVS----------------------------------WNTMISGLDQNGCYEEAIM 343
             +D+V+                                  WN MI+   QNGC   A+ 
Sbjct: 370 KNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMK 429

Query: 344 NFCAMR-RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
            F  M    GL     + I+ L +CASLG +   + +H +  +  L+S+V V+N L+++Y
Sbjct: 430 IFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMY 489

Query: 403 ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
           A  G L    ++F    E   VSW +++ AF+      +EA+  + +M   G  P+ VT+
Sbjct: 490 ARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQY-GRYAEALDLFQEMDLEGVKPDDVTY 548

Query: 463 INILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
            +IL   +     + G +    + + + +A       A++   G+ G + D +++   M 
Sbjct: 549 TSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMP 608

Query: 522 ERRDEVSWNSMISG-YIHNEL 541
              D V+W + ++   IH +L
Sbjct: 609 FEPDPVAWMTFLTACRIHGKL 629


>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 293/824 (35%), Positives = 441/824 (53%), Gaps = 96/824 (11%)

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           SN +++    C    D AR++F+ +  RD  SWN++I  Y+  G      KLF       
Sbjct: 44  SNWVLSNLSKCGRVDD-ARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFY------ 96

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
                   E    S IT                                S+L+SG+ R G
Sbjct: 97  --------ETPIRSCIT-------------------------------WSSLISGYCRYG 117

Query: 246 NFYYARKIFEQMIQK-------------NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA 292
               A ++F +M  +              V SM  L+E   KGK++H + I++       
Sbjct: 118 CDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLE---KGKQIHAHAIKTQFDSNAF 174

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGK-DSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           V  GLV+MYAKC  I ++  +F     K + V W  M++G  QNG   +AI  F  MR +
Sbjct: 175 VVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGE 234

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G+  + F+  S L++C S+     G Q+HG  ++ G  ++V V +AL+ +Y+  G LS  
Sbjct: 235 GIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNA 294

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
            ++   M   D VSWNS+I      + L  EA+  +  M       +  T+ ++L   S 
Sbjct: 295 RRMLETMEVDDPVSWNSMIVGCV-RQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSF 353

Query: 472 FSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
               +    VH+ ++K        + NAL+  Y K G  D    +F +M+++ D +SW S
Sbjct: 354 VMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDK-DVISWTS 412

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC 591
           +++G +HN    +A+ L   M   G   D    A VLSACA +  LE G +VHA  +++ 
Sbjct: 413 LVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSG 472

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
           L   + + ++LV MY+KCG I+ A++ FD M +++V +W ++I GYA++G G        
Sbjct: 473 LGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGR------- 525

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRA 711
                                 HAGLV+ G  +F+SM +VYG+ P  E ++CM+DLLGR+
Sbjct: 526 ---------------------DHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRS 564

Query: 712 GELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVL 771
           G+L + +E +N+M + P++ +W+ +L A CR +    ELG +AAN LFE+EP+NAV YVL
Sbjct: 565 GKLMEAKELLNQMAVQPDATVWKALLAA-CRVH-GNVELGERAANNLFELEPKNAVPYVL 622

Query: 772 LANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEK 831
           L+N+Y++ GKWE+ AK R+ MK   V KE GCSW+ M   VH F++ D SHP    IY K
Sbjct: 623 LSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSK 682

Query: 832 LKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKN 890
           + E+   +++AGYVP   FAL D++ E KE  ++YHSEK+AVAF +LT     PIRI KN
Sbjct: 683 VDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKN 742

Query: 891 LRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           LR+CGDCH+A K++S +  R ++LRDSN FHHF +G CSC DYW
Sbjct: 743 LRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 786



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 148/478 (30%), Positives = 229/478 (47%), Gaps = 63/478 (13%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           NT+I  Y   G L  A KLF E P R+ ++W+ ++SGY   G   EA ++F EM   G  
Sbjct: 76  NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC---LEST 140
            N++  GSVLR C        + G Q+H   +K+    +  V   L+ MY  C   LE  
Sbjct: 136 PNQFTWGSVLRVCSM--YVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILE-- 191

Query: 141 DCARRIFE-EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
             A  +FE   + R+ + W ++++ YSQ GD     + F  M+ EG    ++ N++TF S
Sbjct: 192 --AEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEG----IECNQFTFPS 245

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           ++TA  S  +S      Q+   + ++G  ++++VGSALV  +++ G+   AR++ E M  
Sbjct: 246 ILTACGS--ISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEV 303

Query: 260 KNVVSMNGLMEG-----------------------------------------RRKGKEV 278
            + VS N ++ G                                          R    V
Sbjct: 304 DDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSV 363

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H  ++++G      V N LV+MYAK G  D +  VF  M  KD +SW ++++G   NG Y
Sbjct: 364 HSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSY 423

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           EEA+  FC MR  G+      + + LS+CA L  +  G+Q+H   LK GL S +SV N+L
Sbjct: 424 EEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSL 483

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA------DSEALVSEAVKYYLDM 450
           +S+YA  G +    KVF  M   D ++W ++I  +A      D   LV     Y+  M
Sbjct: 484 VSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDHAGLVEHGRSYFQSM 541



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 144/526 (27%), Positives = 247/526 (46%), Gaps = 48/526 (9%)

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
           LG + ++RK+  Q+            E       +  ++   G     +  N +++  +K
Sbjct: 6   LGIYTFSRKVCHQL------------EHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSK 53

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTM-------------------------------ISGL 332
           CG +DD+R +F  M  +D  SWNTM                               ISG 
Sbjct: 54  CGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGY 113

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            + GC  EA+  F  M+ +G   + F+  S L  C+    +  G+QIH   +K   DS+ 
Sbjct: 114 CRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNA 173

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPE-HDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
            V   L+ +YA    +     +F L P+  + V W +++  ++ +     +A++ + DMR
Sbjct: 174 FVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQN-GDGHKAIECFRDMR 232

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             G   N  TF +IL A  S S    G QVH  +++        + +AL+  Y KCG++ 
Sbjct: 233 GEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLS 292

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
           +  ++   M E  D VSWNSMI G +   L  +A++L   M  R  ++D FT+ +VL+  
Sbjct: 293 NARRMLETM-EVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCF 351

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           + V  +   M VH+  V+   E   ++ +ALVDMY+K G  DYA   F+ M  ++V SW 
Sbjct: 352 SFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWT 411

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           S+++G   +G  ++AL LF +M++ G  PD +    VLSAC+   +++ G K   +    
Sbjct: 412 SLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFG-KQVHANFLK 470

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
            GL   L   + +V +  + G ++   +  + M I  + + W  ++
Sbjct: 471 SGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQ-DVITWTALI 515



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 182/377 (48%), Gaps = 51/377 (13%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD-RNSVSWACIVSG 60
           +  K  H   +K  F  + F+   L+++Y +   +  A  LF+  PD RN V W  +V+G
Sbjct: 155 EKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTG 214

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y+  G  ++A + F++M   G   N++   S+L AC      G  FG QVH  +++S   
Sbjct: 215 YSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACG--FGAQVHGCIVRSGFG 272

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            +  V + L+ MY  C + ++ ARR+ E +E  D +SWNS+I    ++G       LF  
Sbjct: 273 ANVFVGSALVDMYSKCGDLSN-ARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRI 331

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M     R+ +K +E+T+ S++   +S V+     +  + +++ K G  +   V +ALV  
Sbjct: 332 MH---LRH-MKIDEFTYPSVLN-CFSFVMDMRNAM-SVHSLIVKTGFEAYKLVNNALVDM 385

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG----------------------------- 271
           +A+ G F YA  +FE+M  K+V+S   L+ G                             
Sbjct: 386 YAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVI 445

Query: 272 ------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                          GK+VH   ++SGL   ++V N LV+MYAKCG I+D+  VF  M  
Sbjct: 446 AAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEI 505

Query: 320 KDSVSWNTMISGLDQNG 336
           +D ++W  +I G  QNG
Sbjct: 506 QDVITWTALIVGYAQNG 522



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 47/305 (15%)

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           +L H +   V      + ++  N +LS   KCG +DD  K+F  M + RDE SWN+MI  
Sbjct: 23  ELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPD-RDECSWNTMIGA 81

Query: 536 YIHNELLP-------------------------------KAMNLVWFMMQRGQRLDHFTF 564
           Y ++  L                                +A+ L W M   G+R + FT+
Sbjct: 82  YANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTW 141

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP- 623
            +VL  C+    LE+G ++HA  ++   + +  + + LVDMY+KC  I  A   F+L P 
Sbjct: 142 GSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPD 201

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            RN   W +M++GY+++G G KA+  F  M+ +G   +  TF  +L+AC        G  
Sbjct: 202 KRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFG-- 259

Query: 684 HFKSMSQVYGLI------PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
                +QV+G I        +   S +VD+  + G+L      +  M +  + + W +++
Sbjct: 260 -----AQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVD-DPVSWNSMI 313

Query: 738 GACCR 742
             C R
Sbjct: 314 VGCVR 318



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 195/425 (45%), Gaps = 58/425 (13%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  I++ GF  +VF+ + L+++Y + GDL++A ++ + M   + VSW  ++ G   +G+ 
Sbjct: 263 HGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLG 322

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKF------GMQVHCLVLKSNQTF 121
            EA  +F+ M      ++ +   SVL          F F       M VH L++K+    
Sbjct: 323 EEALSLFRIMHLRHMKIDEFTYPSVLNC--------FSFVMDMRNAMSVHSLIVKTGFEA 374

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
             LV+N L+ MY       D A  +FE++  +D+ISW S+++     G      +LF  M
Sbjct: 375 YKLVNNALVDMYAK-RGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEM 433

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           +  G    + P++    ++++A   + L+     +Q+ A   K+GL S L V ++LVS +
Sbjct: 434 RIMG----IHPDQIVIAAVLSAC--AELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMY 487

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
           A+ G    A K+F+ M  ++V++   L+ G  +                    NG    +
Sbjct: 488 AKCGCIEDANKVFDSMEIQDVITWTALIVGYAQ--------------------NGRGRDH 527

Query: 302 AKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA--IMNFCAMRRDGLM 354
           A  G ++  RS F+ M     I      +  MI  L ++G   EA  ++N  A++ D  +
Sbjct: 528 A--GLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATV 585

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLK 413
                  + L++C   G + LG++      +  L+   +V   LLS LY+ AG      K
Sbjct: 586 WK-----ALLAACRVHGNVELGERAANNLFE--LEPKNAVPYVLLSNLYSAAGKWEEAAK 638

Query: 414 VFFLM 418
              LM
Sbjct: 639 TRRLM 643



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 119/249 (47%), Gaps = 12/249 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++A   H  I+K GF     + N L+++Y + G    A  +F++M D++ +SW  +V+G 
Sbjct: 358 RNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGC 417

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
            H G   EA ++F EM   G   ++  + +VL AC E   +  +FG QVH   LKS    
Sbjct: 418 VHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAEL--TVLEFGKQVHANFLKSGLGS 475

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF--- 178
              V N L++MY  C    D A ++F+ +E +D+I+W ++I  Y+Q G       L    
Sbjct: 476 SLSVDNSLVSMYAKCGCIED-ANKVFDSMEIQDVITWTALIVGYAQNGRGRDHAGLVEHG 534

Query: 179 -SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
            S  Q     Y +KP    +  +I      +L  S  L +   ++ +  +  D  V  AL
Sbjct: 535 RSYFQSMEEVYGIKPGPEHYACMI-----DLLGRSGKLMEAKELLNQMAVQPDATVWKAL 589

Query: 238 VSGFARLGN 246
           ++     GN
Sbjct: 590 LAACRVHGN 598


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 264/755 (34%), Positives = 426/755 (56%), Gaps = 60/755 (7%)

Query: 212 SYLLQQILAMVKKAGLLSDLYVG---------------SALVSGFARLGNFYYARKIFEQ 256
           +YL+ +IL +  ++G L DL                  + ++  +AR+ ++  A  IF++
Sbjct: 106 AYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDR 165

Query: 257 MIQKNVVSMN----------GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
           M++  V   N          G +  R  GK+VH  LI  G      VGN L++MYAKC  
Sbjct: 166 MLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDD 225

Query: 307 IDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR--DGLMSSNFSLISTL 364
            +    VF  M  ++ V+WN++IS   Q G + +A++ F  M+   DG+    F+  + L
Sbjct: 226 EESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLL 285

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
           + CA+      G+QIH   ++  +  ++ V   L+ +Y++ G L+   ++F  M E +  
Sbjct: 286 TLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAY 345

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           SWNS+I  +  +     EA++ +  M+  G  P+  +  ++L++  S S  + G ++H  
Sbjct: 346 SWNSMIEGYQQN-GETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNF 404

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR-MSERRDEVSWNSMISGYIHNELLP 543
           +++  +  E  ++  L+  Y KCG MD   K++ + + + R+   WNS+++GY +  L  
Sbjct: 405 IVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKK 464

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           ++ N    M++     D  T  T+++                          +V+ +ALV
Sbjct: 465 ESFNHFLEMLESDIEYDVLTMVTIVNL-------------------------LVLETALV 499

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           DMYSKCG I  A   FD M  +N+ SWN+MISGY++HG   +AL L+ +M   G  P+ V
Sbjct: 500 DMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEV 559

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TF+ +LSACSH GLV+EG + F SM + Y +  + E ++CMVDLLGRAG L+  +EF+ K
Sbjct: 560 TFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEK 619

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           MPI P    W  +LGA CR + +  ++GR AA  LFE++PQN   YV+++N+YA+ G+W+
Sbjct: 620 MPIEPEVSTWGALLGA-CRVH-KDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWK 677

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
           +V   R+ MK   VKK+ G SW+ +   + +F AG ++HP+ + IY  L+ L  + +  G
Sbjct: 678 EVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLG 737

Query: 844 YVPQTKFALFDLEPESKEDLVSY---HSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHS 899
           Y+P T F L +++   +E+   Y   HSE++A++  +++   K  IR+ KNLR+CGDCH+
Sbjct: 738 YIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHT 797

Query: 900 AFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           A KFISKI GR I+ RD+NRFHHF +GKCSCGDYW
Sbjct: 798 ATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832



 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 158/551 (28%), Positives = 268/551 (48%), Gaps = 38/551 (6%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD---SRSVFRFMIGKDSVSWNTMI 329
           ++GK +H  +I +G      +   ++ +YA+ G +DD   +R +F  M  ++  +WNTMI
Sbjct: 88  QRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMI 147

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
               +   Y EA   F  M + G+   NF+  S L  C +L     G+Q+H + +  G  
Sbjct: 148 LAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFK 207

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
            D  V NAL+ +YA       CLKVF  M E +QV+WNS+I A A      ++A+  +L 
Sbjct: 208 GDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQF-GHFNDALVLFLR 266

Query: 450 MRRA--GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
           M+ +  G  P+  TF  +L   ++      G Q+HA +I+ N+     +E  L+  Y +C
Sbjct: 267 MQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSEC 326

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
           G ++  ++IF RM+E R+  SWNSMI GY  N    +A+ L   M   G + D F+ +++
Sbjct: 327 GRLNYAKEIFNRMAE-RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSM 385

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD--LMPVR 625
           LS+C S++  ++G E+H   VR  +E + ++   LVDMY+KCG +DYA + +D  +   R
Sbjct: 386 LSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDR 445

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC----------SHA 675
           N   WNS+++GYA  G   ++   F +M       D +T V +++            S  
Sbjct: 446 NTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLLVLETALVDMYSKC 505

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG---ELDKIEEFINKMPITPNSLI 732
           G + +    F +M+        +  ++ M+    + G   E   + E + K  + PN + 
Sbjct: 506 GAITKARTVFDNMNG-----KNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVT 560

Query: 733 WRTVLGACCRANCRKTELGRKAANMLFEMEPQ-----NAVNYVLLANMYASGGKWEDVAK 787
           +  +L AC       T L  +   +   M+        A +Y  + ++    G+ ED  +
Sbjct: 561 FLAILSACSH-----TGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKE 615

Query: 788 ARKAMK-EAEV 797
             + M  E EV
Sbjct: 616 FVEKMPIEPEV 626



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 142/577 (24%), Positives = 264/577 (45%), Gaps = 80/577 (13%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVG---DLASASKLFDEMPDRNSVSWACIVSG 60
            K  H Q++ +G+  D +L   ++ +Y R G   DL  A KLF+EMP+RN  +W  ++  
Sbjct: 90  GKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILA 149

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y       EA  +F  M++ G   + +   S LR C          G QVH  ++     
Sbjct: 150 YARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGAL--RSRDGGKQVHSKLIACGFK 207

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D  V N LI MY  C +   C  ++F+E+  R+ ++WNSIIS  +Q G       LF R
Sbjct: 208 GDTFVGNALIDMYAKCDDEESCL-KVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLR 266

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           MQ       ++P+++TF +L+T   +         +QI A + +A +  ++ V + LV  
Sbjct: 267 MQES--EDGIQPDQFTFTTLLTLCANQ--RNDNQGRQIHAHLIRANITKNIIVETELVHM 322

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG----------------------------- 271
           ++  G   YA++IF +M ++N  S N ++EG                             
Sbjct: 323 YSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSL 382

Query: 272 ------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                        +KG+E+H +++R+ + +   +   LV+MYAKCG++D +  V+   I 
Sbjct: 383 SSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIK 442

Query: 320 KD--SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
           KD  +  WN++++G    G  +E+  +F  M    +     ++++ ++            
Sbjct: 443 KDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNL----------- 491

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
                         + +  AL+ +Y+  G +++   VF  M   + VSWN++I  ++   
Sbjct: 492 --------------LVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYS-KH 536

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTI 496
               EA+  Y +M + G  PN VTF+ IL+A S   + + G ++   + + YN+  +   
Sbjct: 537 GCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEH 596

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
              ++   G+ G ++D ++   +M    +  +W +++
Sbjct: 597 YTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALL 633



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 202/397 (50%), Gaps = 19/397 (4%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR---CLKVFFLM 418
           S +  C        G+ IH + +  G + D  +   +L LYA +G L       K+F  M
Sbjct: 76  SLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEM 135

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
           PE +  +WN++I A+A  +  + EA   +  M + G  P+  TF + L    +      G
Sbjct: 136 PERNLTAWNTMILAYARVDDYM-EAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGG 194

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
            QVH+++I      +T + NAL+  Y KC + + C K+F  M E R++V+WNS+IS    
Sbjct: 195 KQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGE-RNQVTWNSIISAEAQ 253

Query: 539 NELLPKAMNLVWFMMQR--GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
                 A+ L   M +   G + D FTF T+L+ CA+     +G ++HA  +RA +  ++
Sbjct: 254 FGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNI 313

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
           ++ + LV MYS+CGR++YA   F+ M  RN YSWNSMI GY ++G   +AL LF QM+L+
Sbjct: 314 IVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLN 373

Query: 657 GPLPDHVTFVGVLSAC-----SHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRA 711
           G  PD  +   +LS+C     S  G     F    +M +  G++  +     +VD+  + 
Sbjct: 374 GIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEE-EGILQVV-----LVDMYAKC 427

Query: 712 GELDKIEEFINK-MPITPNSLIWRTVLGACCRANCRK 747
           G +D   +  ++ +    N+ +W ++L        +K
Sbjct: 428 GSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKK 464



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 230/455 (50%), Gaps = 32/455 (7%)

Query: 1   SKDA-KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           S+D  K  H +++  GF  D F+ N LI++Y +  D  S  K+FDEM +RN V+W  I+S
Sbjct: 190 SRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIIS 249

Query: 60  GYTHKGMSNEACKMFKEMVRA--GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
                G  N+A  +F  M  +  G   +++   ++L  C          G Q+H  ++++
Sbjct: 250 AEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLC--ANQRNDNQGRQIHAHLIRA 307

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
           N T + +V   L+ MY  C    + A+ IF  +  R+  SWNS+I  Y Q G+T    +L
Sbjct: 308 NITKNIIVETELVHMYSEC-GRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRL 366

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F +MQ  G    +KP+ ++  S++++  S  LS S   +++   + +  +  +  +   L
Sbjct: 367 FKQMQLNG----IKPDCFSLSSMLSSCVS--LSDSQKGRELHNFIVRNTMEEEGILQVVL 420

Query: 238 VSGFARLGNFYYARKIFEQMIQK--NVVSMNGLMEG-RRKG--KEVHGYL-------IRS 285
           V  +A+ G+  YA K+++Q I+K  N    N ++ G   KG  KE   +        I  
Sbjct: 421 VDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEY 480

Query: 286 GLFDMVAVGN------GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
            +  MV + N       LV+MY+KCG I  +R+VF  M GK+ VSWN MISG  ++GC +
Sbjct: 481 DVLTMVTIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSK 540

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVSNAL 398
           EA++ +  M + G+  +  + ++ LS+C+  G +  G +I     +   +++       +
Sbjct: 541 EALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCM 600

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
           + L   AG L    +    MP   +VS W +++GA
Sbjct: 601 VDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGA 635



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 119/292 (40%), Gaps = 46/292 (15%)

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID---YA 615
           ++   +++++  C    + +RG  +H   +      D  + + ++ +Y++ G +D   YA
Sbjct: 69  VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYA 128

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-- 673
            + F+ MP RN+ +WN+MI  YAR     +A  +F +M   G  PD+ TF   L  C   
Sbjct: 129 RKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGAL 188

Query: 674 ---------HAGLVDEGFKH----FKSMSQVYGLIPQLEQFSCMVDLLGRAGEL------ 714
                    H+ L+  GFK       ++  +Y      E    + D +G   ++      
Sbjct: 189 RSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSII 248

Query: 715 ----------DKIEEFINKMP----ITPNSLIWRTVLGACCRANCRKTELGRKA-ANMLF 759
                     D +  F+        I P+   + T+L  C  AN R    GR+  A+++ 
Sbjct: 249 SAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLC--ANQRNDNQGRQIHAHLIR 306

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
               +N +    L +MY+  G+     +    M E         SW +M +G
Sbjct: 307 ANITKNIIVETELVHMYSECGRLNYAKEIFNRMAE-----RNAYSWNSMIEG 353


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 272/779 (34%), Positives = 417/779 (53%), Gaps = 98/779 (12%)

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY 281
           + K GL   +Y+ + L++ +A+ G+  +A  +F++M  K+  S N L+ G          
Sbjct: 36  IIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISG---------- 85

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
                              YAK G  + SR +   M   D VSW  +I G +Q G ++ A
Sbjct: 86  -------------------YAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNA 126

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS----------- 390
           I  F  M  + +  S F++ + LSSCA+   + +G++IH   +KLGL S           
Sbjct: 127 IWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNM 186

Query: 391 --------------------DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
                               ++S  NAL+SLY  +G        F  MP+ D VSWNS+I
Sbjct: 187 YAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMI 246

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
             ++     +   V +   +      P+  T  +IL+A ++     +G Q+HA +++   
Sbjct: 247 SGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAET 306

Query: 491 ANETTIENALLSCYGKCGEMD---------------------------------DCEKIF 517
                + NAL+S Y K G ++                                    +IF
Sbjct: 307 ETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIF 366

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
            ++ +R D V+W +MI GY+ N L   A+ L   M+  G   + +T A +LS  +S+  L
Sbjct: 367 NKLRDR-DVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTIL 425

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP-VRNVYSWNSMISG 636
           E G ++HA  ++A       + +AL+ MY+K G I+ A R FDL    + + SW SMI  
Sbjct: 426 EHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMA 485

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
            A+HG G +A+ LF +M   G  PDH+T+VGVLSAC+H GLV++G K++  M++V+ + P
Sbjct: 486 LAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEP 545

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAAN 756
            L  ++CM+DL GRAG L +   FI  MPI P+++ W ++L +C     +  +L + AA 
Sbjct: 546 TLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASC--KIHKNADLAKVAAE 603

Query: 757 MLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV 816
            L  ++P N+  Y+ LAN+Y++ GKWE+ A+ RK MK+  V+KE G SW+ +K+ VH F 
Sbjct: 604 RLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFG 663

Query: 817 AGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF- 875
             D  HP+KD IY+ + E+ ++++  G++P T+  L DLE E KE ++ YHSEK+A+AF 
Sbjct: 664 VEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFG 723

Query: 876 VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +L       +RIMKNLRVC DCHSA KFISK+VGREI++RD+ RFHHF DG CSC DYW
Sbjct: 724 LLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 158/588 (26%), Positives = 270/588 (45%), Gaps = 73/588 (12%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
            F  NTLI+ Y + G+   + +L  EMPD + VSW  I+ GY   G+ + A  MF +M+ 
Sbjct: 76  TFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMIS 135

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
                +++ + +VL +C          G ++H  V+K        V+  L+ MY  C + 
Sbjct: 136 ERVPPSQFTVSNVLSSC--AANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDP 193

Query: 140 T------------------------------DCARRIFEEIETRDLISWNSIISVYSQRG 169
                                          + A   FE++  RD++SWNS+IS YSQ+G
Sbjct: 194 VIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQG 253

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLS 229
             +    +FS+M  E    SLKP+ +T  S+++A  +  L    + +QI A + +A   +
Sbjct: 254 YNLEALVIFSKMLNEP---SLKPDNFTLASILSACAN--LEKLNIGKQIHAYILRAETET 308

Query: 230 DLYVGSALVSGFARLGNFYYARKIFE--QMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGL 287
              VG+AL+S +A+ G    AR I E  +    N+++   L++G                
Sbjct: 309 SGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDG---------------- 352

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
                        Y K G +  +R +F  +  +D V+W  MI G  QNG + +A+  F  
Sbjct: 353 -------------YTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRL 399

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M  +G   ++++L + LS  +SL  +  G+QIH   +K G  S  SV+NAL+++YA  G 
Sbjct: 400 MVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGN 459

Query: 408 LSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
           ++   +VF L   + + VSW S+I A A    L  EA+  +  M   G  P+ +T++ +L
Sbjct: 460 INVAKRVFDLPNGKKEIVSWTSMIMALAQ-HGLGKEAINLFERMLSVGMKPDHITYVGVL 518

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENA-LLSCYGKCGEMDDCEKIFARMSERRD 525
           +A +   + + G + +  + + +    T    A ++  YG+ G + +       M    D
Sbjct: 519 SACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPD 578

Query: 526 EVSWNSMISG-YIH-NELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
            ++W S+++   IH N  L K       ++  G    +   A V SAC
Sbjct: 579 NIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSAC 626



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 181/442 (40%), Gaps = 97/442 (21%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD---------------------- 44
            H  ++K G    V +  +L+N+Y + GD   A  +FD                      
Sbjct: 164 IHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQ 223

Query: 45  ---------EMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL-LNRYALGSVLR 94
                    +MPDR+ VSW  ++SGY+ +G + EA  +F +M+    L  + + L S+L 
Sbjct: 224 FELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILS 283

Query: 95  ACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC------------------ 136
           AC          G Q+H  +L++     G V N LI+MY                     
Sbjct: 284 ACANL--EKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNL 341

Query: 137 --------------LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
                         L +   AR IF ++  RD+++W ++I  Y Q G      +LF  M 
Sbjct: 342 NIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMV 401

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            EG     +PN YT  ++++   SS L+     +QI A   KAG  S   V +AL++ +A
Sbjct: 402 NEG----PEPNSYTLAAMLSV--SSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYA 455

Query: 243 RLGNFYYARKIFE-QMIQKNVVSMNGLMEGRRK---GKEVHGYLIRSGLFDMVAVGN--- 295
           + GN   A+++F+    +K +VS   ++    +   GKE      R     M++VG    
Sbjct: 456 KTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFER-----MLSVGMKPD 510

Query: 296 -----GLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNF 345
                G+++     G ++  R  +  M     +      +  MI    + G  +EA +  
Sbjct: 511 HITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFI 570

Query: 346 CAMRRDGLMSSNFSLISTLSSC 367
            +M    +   N +  S L+SC
Sbjct: 571 ESM---PIEPDNIAWGSLLASC 589



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 124/284 (43%), Gaps = 63/284 (22%)

Query: 454 GWSPNGVTFI-NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           G SP    F  +IL  +        G  VH Q+IK  +     + N L++ Y K G +  
Sbjct: 4   GNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRF 63

Query: 513 CEKIFARMS----------------------ERR--------DEVSWNSMISGYIHNELL 542
              +F  M                        RR        D VSW ++I GY    L 
Sbjct: 64  AHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLF 123

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
             A+ +   M+        FT + VLS+CA+  TL+ G ++H+  V+  L   V + ++L
Sbjct: 124 DNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSL 183

Query: 603 VDMYSKC-------------------------------GRIDYASRFFDLMPVRNVYSWN 631
           ++MY+KC                               G+ + A+  F+ MP R++ SWN
Sbjct: 184 LNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWN 243

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSH 674
           SMISGY++ G+  +AL +FS+M  +  L PD+ T   +LSAC++
Sbjct: 244 SMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACAN 287



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 143/307 (46%), Gaps = 17/307 (5%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           ++    +L++ Y ++G++  A ++F+++ DR+ V+W  ++ GY   G+ N+A ++F+ MV
Sbjct: 342 NIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMV 401

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             G   N Y L ++L        +  + G Q+H   +K+ ++    V+N LIAMY     
Sbjct: 402 NEGPEPNSYTLAAMLSVSSSL--TILEHGKQIHASAIKAGESSTPSVTNALIAMYAKT-G 458

Query: 139 STDCARRIFEEIE-TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
           + + A+R+F+     ++++SW S+I   +Q G       LF RM   G    +KP+  T+
Sbjct: 459 NINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVG----MKPDHITY 514

Query: 198 -GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
            G L    +  ++        ++  V +       Y  + ++  + R G    A    E 
Sbjct: 515 VGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHY--ACMIDLYGRAGLLQEAYLFIES 572

Query: 257 M-IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN-----GLVNMYAKCGTIDDS 310
           M I+ + ++   L+   +  K      + +    ++  GN      L N+Y+ CG  +++
Sbjct: 573 MPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENA 632

Query: 311 RSVFRFM 317
               + M
Sbjct: 633 AQTRKLM 639



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 111/261 (42%), Gaps = 38/261 (14%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           FA +L     +     G  VH   ++  L   V + + L+  Y+K G + +A   FD MP
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
           +++ +SWN++ISGYA+ G+ + +  L  +M    P  D V++  ++   +  GL D    
Sbjct: 73  LKSTFSWNTLISGYAKQGNFEVSRRLLYEM----PDCDPVSWTAIIVGYNQFGLFDNAIW 128

Query: 684 HFKSMSQVYGLIPQLEQF-------SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
            F  M  +   +P   QF       SC  +     G   KI  F+ K+            
Sbjct: 129 MFAKM--ISERVPP-SQFTVSNVLSSCAANQTLDIGR--KIHSFVVKLG----------- 172

Query: 737 LGACCRANCRKTELGRKA-----ANMLFE-MEPQNAVNYVLLANMYASGGKWEDVAKARK 790
           LG+C         +  K      A ++F+ M  +N   +  L ++Y   G++E  A   +
Sbjct: 173 LGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFE 232

Query: 791 AMKEAEVKKEAGCSWVTMKDG 811
            M + ++      SW +M  G
Sbjct: 233 KMPDRDI-----VSWNSMISG 248


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 289/853 (33%), Positives = 448/853 (52%), Gaps = 75/853 (8%)

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           ++   L SVL+ C +      K G +V   +  +    D  + + L  MY +C +  + A
Sbjct: 92  IDPRTLCSVLQLCAD--SKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKE-A 148

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
            R+F++++    + WN +++  ++ GD      LF +M                      
Sbjct: 149 SRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM--------------------- 187

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
                                +G+  D Y  S +   F+ L                   
Sbjct: 188 --------------------SSGVEMDSYTFSCVSKSFSSLR------------------ 209

Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
           S+NG       G+++HGY+++SG  +  +VGN LV  Y K   +D +R VF  M  +D +
Sbjct: 210 SVNG-------GEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVI 262

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SWN++I+G   NG  E+ +  F  M   G+     +++S  + CA    I LG+ +H  G
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFG 322

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           +K     +    N LL +Y+  G L     VF  M     VS+ S+I  +A  E L  EA
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYA-REGLAGEA 381

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           VK + +M   G SP+  T   +L   +   +   G +VH  + + ++  +  + NAL+  
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDM 441

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV-WFMMQRGQRLDHF 562
           Y KCG M + E +F+ M   +D +SWN++I GY  N    +A++L    ++++    D  
Sbjct: 442 YAKCGSMREAELVFSEM-RVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDER 500

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           T A VL ACAS++  ++G E+H   +R     D  + ++LVDMY+KCG +  A   FD +
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDI 560

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
             +++ SW  MI+GY  HG G +A+ LF+QM+  G  PD ++FV +L ACSH+GLVDEG+
Sbjct: 561 TSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGW 620

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
           + F  M     + P +E ++C+VD+L R G L K   FI  MPI P++ IW  +L   CR
Sbjct: 621 RFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCG-CR 679

Query: 743 ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
            +    +L  + A  +FE+EP+N   YVL+AN+YA   KWE+V + RK + +  ++K  G
Sbjct: 680 IH-HDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPG 738

Query: 803 CSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKED 862
           CSW+ +K  V++FVAGD S+PE + I   L+ +  +M + GY P TK+AL D E   KE+
Sbjct: 739 CSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEE 798

Query: 863 LVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFH 921
            +  HSEK+A+A  +++      IR+ KNLRVCGDCH   KF+SK+  REIVLRDSNRFH
Sbjct: 799 ALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFH 858

Query: 922 HFNDGKCSCGDYW 934
            F DG CSC  +W
Sbjct: 859 QFKDGHCSCRGFW 871



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 154/582 (26%), Positives = 266/582 (45%), Gaps = 50/582 (8%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           KD K     I  +GF  D  L + L  +Y   GDL  AS++FD++    ++ W  +++  
Sbjct: 111 KDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNEL 170

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G  + +  +FK+M+ +G  ++ Y    V ++           G Q+H  +LKS    
Sbjct: 171 AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL--RSVNGGEQLHGYILKSGFGE 228

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V N L+A Y       D AR++F+E+  RD+ISWNSII+ Y   G       +F +M
Sbjct: 229 RNSVGNSLVAFYLKN-HRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 287

Query: 182 QREGFRYSLKPNEYTFG--------SLITAAYSSVLSGSY-----LLQQILAMVKKAGLL 228
              G    L      F         SL  A +   +   +         +L M  K G L
Sbjct: 288 LFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDL 347

Query: 229 SDLYVG------------SALVSGFARLGNFYYARKIFEQMIQK-------------NVV 263
               V             +++++G+AR G    A K+FE+M ++             N  
Sbjct: 348 DSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 407

Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
           + N L++   +GK VH ++  + +   + V N L++MYAKCG++ ++  VF  M  KD +
Sbjct: 408 ARNRLLD---EGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDII 464

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIS-TLSSCASLGWIMLGQQIHGE 382
           SWNT+I G  +N    EA+  F  +  +   S +   ++  L +CASL     G++IHG 
Sbjct: 465 SWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGY 524

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            ++ G  SD  V+N+L+ +YA  G L     +F  +   D VSW  +I  +        E
Sbjct: 525 IMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYG-MHGFGKE 583

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--AL 500
           A+  +  MR+AG  P+ ++F+++L A S   +   G +    ++++    E T+E+   +
Sbjct: 584 AIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFF-NIMRHECKIEPTVEHYACI 642

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
           +    + G +    +    M    D   W +++ G  IH+++
Sbjct: 643 VDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDV 684



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 164/342 (47%), Gaps = 18/342 (5%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H  I ++   +D+F+ N L+++Y + G +  A  +F EM  ++ +SW  ++ GY+
Sbjct: 415 EGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYS 474

Query: 63  HKGMSNEACKMFK-EMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
               +NEA  +F   +V   F  +   +  VL AC     S F  G ++H  ++++    
Sbjct: 475 KNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASL--SAFDKGREIHGYIMRNGYFS 532

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V+N L+ MY  C  +   AR +F++I ++DL+SW  +I+ Y   G       LF++M
Sbjct: 533 DRHVANSLVDMYAKC-GALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQM 591

Query: 182 QREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           ++ G    ++P+E +F SL+ A ++S ++   +    I+    K     + Y  + +V  
Sbjct: 592 RQAG----IEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY--ACIVDM 645

Query: 241 FARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG-- 296
            AR GN   A +  E M I  +      L+ G R   +V     +   +F++     G  
Sbjct: 646 LARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYY 705

Query: 297 --LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
             + N+YA+    ++ + + R  IG+  +  N   S ++  G
Sbjct: 706 VLMANIYAEAEKWEEVKRL-RKRIGQRGLRKNPGCSWIEIKG 746



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 130/271 (47%), Gaps = 4/271 (1%)

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
           W  +  T  ++L   +     K G +V   +       ++ + + L   Y  CG++ +  
Sbjct: 90  WDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEAS 149

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           ++F ++   +  + WN +++    +     ++ L   MM  G  +D +TF+ V  + +S+
Sbjct: 150 RVFDQVKIEK-ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL 208

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
            ++  G ++H   +++       +G++LV  Y K  R+D A + FD M  R+V SWNS+I
Sbjct: 209 RSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSII 268

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
           +GY  +G  +K L++F QM   G   D  T V V + C+ + L+  G         V   
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLG--RAVHCFGVKAC 326

Query: 695 IPQLEQF-SCMVDLLGRAGELDKIEEFINKM 724
             + ++F + ++D+  + G+LD  +    +M
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKVVFREM 357


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 256/731 (35%), Positives = 425/731 (58%), Gaps = 20/731 (2%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN--------- 266
           QQ+  ++++     D++  + ++  + + G++  A  +F QM +++V+            
Sbjct: 60  QQVFEILER----KDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNA 115

Query: 267 -GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
               E  + G E+HG +++ G    V VG  L+NMY KCG++  +   F+ +  +D VSW
Sbjct: 116 CASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSW 175

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
             MI+   Q+  +  A   +  M+ DG++ +  +L +  ++     ++  G+ I+     
Sbjct: 176 TAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSS 235

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
             ++SDV V N+ ++++ +AG L    ++F  M + D V+WN VI  +  +E    EAV+
Sbjct: 236 RVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENF-GEAVR 294

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            +  +++ G   N +TF+ +L   +S +    G  +H  V +     +  +  AL+S YG
Sbjct: 295 LFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYG 354

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           +C       KIF  M  + D ++W  M   Y  N    +A+ L   M   G+R    T  
Sbjct: 355 RCEAPGQAWKIFVDMGSK-DVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLV 413

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
            VL  CA +A L++G ++H+  +      ++V+ +AL++MY KCG++  A   F+ M  R
Sbjct: 414 AVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKR 473

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
           ++  WNSM+  YA+HG+ D+ L LF+QM+LDG   D V+FV VLSA SH+G V +G+++F
Sbjct: 474 DILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYF 533

Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP-ITPNSLIWRTVLGACCRAN 744
            +M Q + + P  E + C+VDLLGRAG + +  + + K+    P+ ++W T+LGAC   N
Sbjct: 534 VAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHN 593

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
             KT+  + AA  + E +P ++  YV+L+N+YA+ G W+ V + RK M+   VKKE G S
Sbjct: 594 --KTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRS 651

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLV 864
            + + + VH F+ GD SHP +  IY +L  LN +MR AGY+P TK  L D+E E KED++
Sbjct: 652 SIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDML 711

Query: 865 SYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
            YHSE++A+AF +++     P+R++KNLRVC DCH+A K+ISK+ GREI++RD++RFH+F
Sbjct: 712 FYHSERLAIAFGLMSTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNF 771

Query: 924 NDGKCSCGDYW 934
            DG+CSC DYW
Sbjct: 772 KDGRCSCKDYW 782



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 250/510 (49%), Gaps = 5/510 (0%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+ VH ++   G      V   L+ MYA+CG++ +++ VF  +  KD  +W  MI    Q
Sbjct: 24  GRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQ 83

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G Y+ A+  F  M+ + +M +  + ++ L++CAS   +  G +IHG+ L+ G + DV V
Sbjct: 84  QGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFV 143

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             AL+++Y   G +      F  +   D VSW ++I A    +   + A   Y  M+  G
Sbjct: 144 GTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQF-ALARWLYRRMQLDG 202

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             PN +T   +  A         G  +++ V    + ++  + N+ ++ +G  G + D  
Sbjct: 203 VVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDAR 262

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           ++F  M + RD V+WN +I+ Y+ NE   +A+ L   + Q G + +  TF  +L+   S+
Sbjct: 263 RLFEDMVD-RDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSL 321

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
            +L +G  +H     A  + DVV+ +AL+ +Y +C     A + F  M  ++V +W  M 
Sbjct: 322 TSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMC 381

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
             YA++G   +AL LF +M+L+G  P   T V VL  C+H   + +G +   S     G 
Sbjct: 382 VAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKG-RQIHSHIIENGF 440

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
             ++   + ++++ G+ G++ +      KM    + L+W ++LGA  +       L +  
Sbjct: 441 RMEMVVETALINMYGKCGKMAEARSVFEKMA-KRDILVWNSMLGAYAQHGYYDETL-QLF 498

Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWED 784
             M  + E  +AV++V + +  +  G   D
Sbjct: 499 NQMQLDGEKADAVSFVSVLSALSHSGSVTD 528



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/559 (23%), Positives = 251/559 (44%), Gaps = 58/559 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +   GF  +  +C  LI +Y + G +  A ++F+ +  ++  +W  ++  Y  +G  
Sbjct: 28  HWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDY 87

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           + A  MF +M     +  +    ++L AC        K GM++H  +L+     D  V  
Sbjct: 88  DRALGMFYQMQEEDVMPTKVTYVAILNAC--ASTESLKDGMEIHGQILQQGFEGDVFVGT 145

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI MY  C  S   A   F+ +E RD++SW ++I+   Q         L+ RMQ +G  
Sbjct: 146 ALINMYNKC-GSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDG-- 202

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVGSALVSGFARL 244
             + PN+ T  ++  A         + L +   I ++V    + SD+ V ++ ++ F   
Sbjct: 203 --VVPNKITLYTVFNA-----YGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNA 255

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLME---------------GR----------------- 272
           G    AR++FE M+ ++VV+ N ++                GR                 
Sbjct: 256 GLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLML 315

Query: 273 ---------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                     KGK +H  +  +G    V V   L+++Y +C     +  +F  M  KD +
Sbjct: 316 NVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVI 375

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           +W  M     QNG  +EA+  F  M+ +G   ++ +L++ L +CA L  +  G+QIH   
Sbjct: 376 TWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHI 435

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           ++ G   ++ V  AL+++Y   G ++    VF  M + D + WNS++GA+A       E 
Sbjct: 436 IENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYA-QHGYYDET 494

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLS 502
           ++ +  M+  G   + V+F+++L+A S       G+Q    +++ +++     +   ++ 
Sbjct: 495 LQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVD 554

Query: 503 CYGKCGEMDDCEKIFARMS 521
             G+ G + +   I  ++S
Sbjct: 555 LLGRAGRIQEAVDIVLKLS 573



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 136/477 (28%), Positives = 224/477 (46%), Gaps = 57/477 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           KD    H QIL+ GF  DVF+   LIN+Y + G +  A   F  +  R+ VSW  +++  
Sbjct: 123 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 182

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                   A  +++ M   G + N+  L +V  A  +  P     G  ++ LV       
Sbjct: 183 VQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGD--PHYLSEGKFIYSLVSSRVMES 240

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V N  + M+G+     D ARR+FE++  RD+++WN +I+ Y Q  +     +LF R+
Sbjct: 241 DVRVMNSAMNMFGNAGLLGD-ARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRL 299

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           Q++G    +K N+ TF  L+   Y+S+ S +   + I  +VK+AG   D+ V +AL+S +
Sbjct: 300 QQDG----IKANDITF-VLMLNVYTSLTSLAK-GKVIHELVKEAGYDRDVVVATALMSLY 353

Query: 242 ARLGNFYYARKIFEQMIQKNVVS---------MNGL------------MEGRR------- 273
            R      A KIF  M  K+V++          NG             +EGRR       
Sbjct: 354 GRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLV 413

Query: 274 -------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                        KG+++H ++I +G    + V   L+NMY KCG + ++RSVF  M  +
Sbjct: 414 AVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKR 473

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D + WN+M+    Q+G Y+E +  F  M+ DG  +   S +S LS+ +  G +  G Q  
Sbjct: 474 DILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYF 533

Query: 381 GEGLK-LGLDSDVSVSNALLSLYADAGYLSRC----LKVFFLMPEHDQVSWNSVIGA 432
              L+   +     +   ++ L   AG +       LK+   +P  D + W +++GA
Sbjct: 534 VAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLP--DGILWMTLLGA 588



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 155/332 (46%), Gaps = 20/332 (6%)

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
           + P+   F+ +L   SS      G +VH  V          +   L+  Y +CG + + +
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           ++F  + ER+D  +W  MI  Y       +A+ + + M +        T+  +L+ACAS 
Sbjct: 61  QVF-EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACAST 119

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
            +L+ GME+H   ++   E DV +G+AL++MY+KCG +  A   F  +  R+V SW +MI
Sbjct: 120 ESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMI 179

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
           +   +H     A  L+ +M+LDG +P+ +T   V +A      + EG K   S+     +
Sbjct: 180 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEG-KFIYSLVSSRVM 238

Query: 695 IPQLEQFSCMVDLLGRAGELDK----IEEFINKMPITPNSLIWRTV----LGACCRANCR 746
              +   +  +++ G AG L       E+ +++  +T N +I   V     G   R   R
Sbjct: 239 ESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGR 298

Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYAS 778
             + G KA          N + +VL+ N+Y S
Sbjct: 299 LQQDGIKA----------NDITFVLMLNVYTS 320



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 151/311 (48%), Gaps = 2/311 (0%)

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
            ++ L  C+S   +  G+++H      G + +  V   L+ +YA  G +    +VF ++ 
Sbjct: 8   FVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE 67

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             D  +W  +IG +   +     A+  +  M+     P  VT++ IL A +S    K G 
Sbjct: 68  RKDVFAWTRMIGIYC-QQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGM 126

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           ++H Q+++     +  +  AL++ Y KCG +      F R+ E RD VSW +MI+  + +
Sbjct: 127 EIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL-EHRDVVSWTAMIAACVQH 185

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
           +    A  L   M   G   +  T  TV +A      L  G  +++      +E DV + 
Sbjct: 186 DQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVM 245

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           ++ ++M+   G +  A R F+ M  R+V +WN +I+ Y ++ +  +A+ LF +++ DG  
Sbjct: 246 NSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIK 305

Query: 660 PDHVTFVGVLS 670
            + +TFV +L+
Sbjct: 306 ANDITFVLMLN 316


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 290/904 (32%), Positives = 479/904 (52%), Gaps = 75/904 (8%)

Query: 86  RYALGSVLRACQECGP-SGFKFGMQVHCLVLKSNQ-TFDGLVSNVLIAMYGSC---LEST 140
           + A+G +L   Q+CG     + G ++  ++  S+Q + D +++  LI MY  C   LES 
Sbjct: 107 KEAMGMLL---QKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLES- 162

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQR---GDTISVF-KLFSRMQREGFRYSLKPNEYT 196
              R +F+ +  ++L  WN+++S Y +     + I  F +L S  +        +P+ +T
Sbjct: 163 ---RLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTE-------FQPDNFT 212

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           F  LI A         +L + +  M  K GL+ DL+VG+A+++ + + G    A ++F++
Sbjct: 213 FPCLIKACTGKC--DIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDK 270

Query: 257 MIQKNVVSMNGLMEGRRK------------------------------------------ 274
           M ++N++S N L+ G  +                                          
Sbjct: 271 MPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVD 330

Query: 275 -GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
            G  +HG  ++ GL   + V N L++MY+KCG + ++  +FR +  K  VSWN+MI    
Sbjct: 331 VGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYS 390

Query: 334 QNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
           + G   E   ++    M  + +  +  ++++ L +C     ++  + +HG  L+      
Sbjct: 391 REGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYK 450

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
             ++NA ++ YA  G L     VFF M      SWN+VIG  A +   + +A+ +Y +M 
Sbjct: 451 ELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPI-KALDFYFEMT 509

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
           R G  P+  + +++L A     + + G ++H  V++  +   + +  +LLS Y  C +  
Sbjct: 510 RLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPF 569

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
                F  M ++ + V WN+M+SGY  NEL  +A++L   M+  G   D    A++L AC
Sbjct: 570 YGRTYFETMGDK-NSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGAC 628

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           + ++ L  G EVH   ++  L  D  +  +L+DMY+K G + ++ R F+ +  + V SWN
Sbjct: 629 SQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWN 688

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
            MI+G+  HG G+KA+ LF  MK     PD  TF+GVL AC HAGLV EG  +   M  +
Sbjct: 689 VMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTL 748

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
           Y L P+LE ++C++D+LGRAG L++   FIN+MP  P++ IW ++L +         E+G
Sbjct: 749 YKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSS--SITYVDLEMG 806

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
            K A  L  +E   A +Y+LL+N+YA+ GKW+ V   R+ MK+  ++K+ GCSW+ ++  
Sbjct: 807 EKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGK 866

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
           V+ F+AG+ S+P  D I +    L +++ + GY P     L +LE   K  ++  HSEK+
Sbjct: 867 VYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKV 926

Query: 872 AVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           A+ F  L       +RI KNLR+C DCH+A K+ISK   REIV+RD+ RFHHF  G CSC
Sbjct: 927 AICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSC 986

Query: 931 GDYW 934
           GDYW
Sbjct: 987 GDYW 990



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 179/665 (26%), Positives = 309/665 (46%), Gaps = 56/665 (8%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           KL  +  +   F+ D  L   LI +Y   G    +  +FD + ++N   W  +VSGY   
Sbjct: 128 KLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRN 187

Query: 65  GMSNEACKMFKEMVRAG-FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            + +EA   F E++    F  + +    +++AC   G      G  VH + +K     D 
Sbjct: 188 ELYDEAIHTFLELISVTEFQPDNFTFPCLIKACT--GKCDIHLGKSVHGMAVKMGLIMDL 245

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V N +IA+YG C    D A  +F+++  ++LISWNS+I  +S+ G  +  ++ F  +  
Sbjct: 246 FVGNAMIALYGKC-GFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLE 304

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQIL-AMVKKAGLLSDLYVGSALVSGFA 242
            G    L P+  T  +L+         G+  +  ++  M  K GL+ +L V +AL+  ++
Sbjct: 305 SG--DGLIPDVATMVTLLPVCSG---EGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYS 359

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG-RRKG-------------------------- 275
           + G    A  +F ++  K+VVS N ++    R+G                          
Sbjct: 360 KCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTI 419

Query: 276 ----------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                           + +HGY +R        + N  +  YAKCG++  +  VF  M  
Sbjct: 420 LNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNT 479

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           K   SWN +I G  QNG   +A+  +  M R G++  +FS++S L +C  LG +  G++I
Sbjct: 480 KSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEI 539

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           HG  L+ GL+ +  V+ +LLSLY            F  M + + V WN+++  ++ +E L
Sbjct: 540 HGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNE-L 598

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
            +EA+  +  M   G  P+ +   +IL A S  S   LG +VH   +K ++  +  +  +
Sbjct: 599 PNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACS 658

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  Y K G +   ++IF R++  ++  SWN MI+G+  +    KA+ L   M +  ++ 
Sbjct: 659 LMDMYAKSGFLGHSQRIFNRLN-GKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQP 717

Query: 560 DHFTFATVLSACASVATLERGMEVHA-CGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
           D FTF  VL AC     +  G+   A       LE ++   + ++DM  + GR++ A  F
Sbjct: 718 DRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNF 777

Query: 619 FDLMP 623
            + MP
Sbjct: 778 INEMP 782



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 262/572 (45%), Gaps = 56/572 (9%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H   +K G   D+F+ N +I +Y + G L  A +LFD+MP++N +SW  ++ G++ 
Sbjct: 229 GKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSE 288

Query: 64  KGMSNEACKMFKEMVRA--GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
            G   EA + F+ ++ +  G + +   + ++L  C   G      GM +H + +K     
Sbjct: 289 NGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCS--GEGNVDVGMVIHGMAVKLGLVH 346

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           + +V N LI MY  C   ++ A  +F +IE + ++SWNS+I  YS+ G     F L  +M
Sbjct: 347 ELMVCNALIDMYSKCGCLSEAA-ILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKM 405

Query: 182 QREGFRYSLKPNEYTFGSLITAAY--SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
             E     ++ NE T  +L+ A    S +LS    L+ +     +        + +A ++
Sbjct: 406 WME--EELMEVNEVTILNLLPACLEESELLS----LRALHGYSLRHSFQYKELINNAFIA 459

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------- 274
            +A+ G+  +A  +F  M  K+V S N ++ G  +                         
Sbjct: 460 AYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFS 519

Query: 275 ----------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                           GKE+HG+++R+GL     V   L+++Y  C      R+ F  M 
Sbjct: 520 IVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMG 579

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            K+SV WN M+SG  QN    EA+  F  M  DGL     ++ S L +C+ L  + LG++
Sbjct: 580 DKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKE 639

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           +H   LK  L  D  V+ +L+ +YA +G+L    ++F  +   +  SWN +I  F     
Sbjct: 640 VHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFG-VHG 698

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-IKYNVANETTIE 497
             ++AV+ + DM+R+   P+  TF+ +L A     +   G    AQ+   Y +  E    
Sbjct: 699 QGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHY 758

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
             ++   G+ G +++       M E  D   W
Sbjct: 759 ACVIDMLGRAGRLNEALNFINEMPEEPDAKIW 790


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 281/894 (31%), Positives = 478/894 (53%), Gaps = 62/894 (6%)

Query: 46  MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFK 105
           M  R + S    ++G+       +   +F +  R    L        LRAC+  G   ++
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRR-WQ 59

Query: 106 FGMQVHCLVLKSNQTFDGLVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSII 162
              ++H   +        +V N+LI +Y   G  L     ARR+FEE+  RD +SW +++
Sbjct: 60  VVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLP----ARRVFEELSARDNVSWVAML 115

Query: 163 SVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMV 222
           S Y+Q G       L+ +M R G    + P  Y   S++++   + L     L  I A  
Sbjct: 116 SGYAQNGLGEEALGLYRQMHRAG----VVPTPYVLSSVLSSCTKAELFAQGRL--IHAQG 169

Query: 223 KKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------- 272
            K G  S+++VG+A+++ + R G+F  A ++F  M  ++ V+ N L+ G           
Sbjct: 170 YKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHAL 229

Query: 273 -------------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
                                          +KG ++H YL ++G+     +   L+++Y
Sbjct: 230 EIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLY 289

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
            KCG ++ +  +F      + V WN M+    Q     ++   FC M+  G+  + F+  
Sbjct: 290 VKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYP 349

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
             L +C     I LG+QIH   +K G +SD+ VS  L+ +Y+  G+L +  +V  ++ E 
Sbjct: 350 CILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK 409

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D VSW S+I  +   E    +A+  + +M++ G  P+ +   + ++  +  +  + G Q+
Sbjct: 410 DVVSWTSMIAGYVQHEC-CKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQI 468

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           HA++     + + +I NAL++ Y +CG + +    F  + E +DE++WN ++SG+  + L
Sbjct: 469 HARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEI-EHKDEITWNGLVSGFAQSGL 527

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +A+ +   M Q G + + FTF + LSA A++A +++G ++HA  ++    F+  +G+A
Sbjct: 528 HEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA 587

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+ +Y KCG  + A   F  M  RN  SWN++I+  ++HG G +AL LF QMK +G  P+
Sbjct: 588 LISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPN 647

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            VTF+GVL+ACSH GLV+EG  +FKSMS  YG+ P+ + ++C++D+ GRAG+LD+ ++FI
Sbjct: 648 DVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFI 707

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
            +MPI  ++++WRT+L AC     +  E+G  AA  L E+EP ++ +YVLL+N YA   K
Sbjct: 708 EEMPIAADAMVWRTLLSAC--KVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEK 765

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           W +  + RK M++  V+KE G SW+ +K+ VH F  GD  HP  + IY  L  +N ++  
Sbjct: 766 WANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAK 825

Query: 842 AGYVPQTKFALF-DLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRV 893
            GY  Q K+ LF D E E ++     HSEK+AV F +++    +P+R++KNLRV
Sbjct: 826 VGY-KQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878



 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 199/681 (29%), Positives = 340/681 (49%), Gaps = 62/681 (9%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H + +  G      + N LI++Y + G +  A ++F+E+  R++VSW  ++SGY   G+
Sbjct: 64  IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA  ++++M RAG +   Y L SVL +C +     F  G  +H    K     +  V 
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKA--ELFAQGRLIHAQGYKHGFCSEIFVG 181

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N +I +Y  C  S   A R+F ++  RD +++N++IS ++Q G      ++F  MQ  G 
Sbjct: 182 NAVITLYLRC-GSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG- 239

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              L P+  T  SL+ A  S  L       Q+ + + KAG+ SD  +  +L+  + + G+
Sbjct: 240 ---LSPDCVTISSLLAACAS--LGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGD 294

Query: 247 FYYARKIFEQMIQKNVVSMNGLM---------------------EGRRK----------- 274
              A  IF    + NVV  N ++                      G R            
Sbjct: 295 VETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRT 354

Query: 275 ---------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    G+++H   +++G    + V   L++MY+K G ++ +R V   +  KD VSW
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
            +MI+G  Q+ C ++A+  F  M++ G+   N  L S +S CA +  +  G QIH     
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G   DVS+ NAL++LYA  G +      F  +   D+++WN ++  FA S  L  EA+K
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQS-GLHEEALK 533

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            ++ M ++G   N  TF++ L+A+++ +  K G Q+HA+VIK   + ET + NAL+S YG
Sbjct: 534 VFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYG 593

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           KCG  +D +  F+ MSE R+EVSWN++I+    +    +A++L   M + G + +  TF 
Sbjct: 594 KCGSFEDAKMEFSEMSE-RNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFI 652

Query: 566 TVLSACASVATLERGMEVHAC-----GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
            VL+AC+ V  +E G+          G+R   +    +    +D++ + G++D A +F +
Sbjct: 653 GVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACV----IDIFGRAGQLDRAKKFIE 708

Query: 621 LMPV-RNVYSWNSMISGYARH 640
            MP+  +   W +++S    H
Sbjct: 709 EMPIAADAMVWRTLLSACKVH 729



 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 160/574 (27%), Positives = 282/574 (49%), Gaps = 52/574 (9%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +L H Q  KHGF  ++F+ N +I +Y+R G    A ++F +MP R++V++  ++SG+  
Sbjct: 162 GRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQ 221

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G    A ++F+EM  +G   +   + S+L AC   G    + G Q+H  + K+  + D 
Sbjct: 222 CGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLG--DLQKGTQLHSYLFKAGISSDY 279

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           ++   L+ +Y  C +  + A  IF   +  +++ WN ++  + Q  D    F+LF +MQ 
Sbjct: 280 IMEGSLLDLYVKCGD-VETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQA 338

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G R    PN++T+  ++     +      L +QI ++  K G  SD+YV   L+  +++
Sbjct: 339 AGIR----PNQFTYPCILRTC--TCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSK 392

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG-------------------------------- 271
            G    AR++ E + +K+VVS   ++ G                                
Sbjct: 393 YGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASA 452

Query: 272 ---------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                     R+G ++H  +  SG    V++ N LVN+YA+CG I ++ S F  +  KD 
Sbjct: 453 ISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDE 512

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           ++WN ++SG  Q+G +EEA+  F  M + G+  + F+ +S LS+ A+L  I  G+QIH  
Sbjct: 513 ITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHAR 572

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            +K G   +  V NAL+SLY   G        F  M E ++VSWN++I + +     + E
Sbjct: 573 VIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGL-E 631

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALL 501
           A+  +  M++ G  PN VTFI +LAA S   + + G     +   +Y +         ++
Sbjct: 632 ALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVI 691

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             +G+ G++D  +K    M    D + W +++S 
Sbjct: 692 DIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSA 725



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 49/99 (49%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H +++K G +++  + N LI++Y + G    A   F EM +RN VSW  I++  
Sbjct: 564 KQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSC 623

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           +  G   EA  +F +M + G   N      VL AC   G
Sbjct: 624 SQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVG 662


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 274/780 (35%), Positives = 419/780 (53%), Gaps = 100/780 (12%)

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY 281
           + K GL   +Y+ + L++ +A+ G+  +A  +F++M  K+  S N L+ G          
Sbjct: 36  IIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISG---------- 85

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
                              YAK G  + SR +   M   D VSW  +I G +Q G ++ A
Sbjct: 86  -------------------YAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNA 126

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS----------- 390
           I  F  M  + +  S F++ + LSSCA+   + +G++IH   +KLGL S           
Sbjct: 127 IWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNM 186

Query: 391 --------------------DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
                               ++S  NAL+SLY  +G        F  MP+ D VSWNS+I
Sbjct: 187 YAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMI 246

Query: 431 GAFADSEALVSEAVKYYLDM-RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
             ++  +    EA+  +  M       P+  T  +IL+A ++     +G Q+HA +++  
Sbjct: 247 SGYSQ-QGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAE 305

Query: 490 VANETTIENALLSCYGKCGEMD---------------------------------DCEKI 516
                 + NAL+S Y K G ++                                    +I
Sbjct: 306 TETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREI 365

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F ++ +R D V+W +MI GY+ N L   A+ L   M+  G   + +T A +LS  +S+  
Sbjct: 366 FNKLRDR-DVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTI 424

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP-VRNVYSWNSMIS 635
           LE G ++HA  ++A       + +AL+ MY+K G I+ A R FDL    + + SW SMI 
Sbjct: 425 LEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIM 484

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
             A+HG G +A+ LF +M   G  PDH+T+VGVLSAC+H GLV++G K++  M++V+ + 
Sbjct: 485 ALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIE 544

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           P L  ++CM+DL GRAG L +   FI  MPI P+++ W ++L +C     +  +L + AA
Sbjct: 545 PTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASC--KIHKNADLAKVAA 602

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
             L  ++P N+  Y+ LAN+Y++ GKWE+ A+ RK MK+  V+KE G SW+ +K+ VH F
Sbjct: 603 ERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAF 662

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
              D  HP+KD IY+ + E+ ++++  G++P T+  L DLE E KE ++ YHSEK+A+AF
Sbjct: 663 GVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAF 722

Query: 876 -VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            +L       +RIMKNLRVC DCHSA KFISK+VGREI++RD+ RFHHF DG CSC DYW
Sbjct: 723 GLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 158/588 (26%), Positives = 270/588 (45%), Gaps = 73/588 (12%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
            F  NTLI+ Y + G+   + +L  EMPD + VSW  I+ GY   G+ + A  MF +M+ 
Sbjct: 76  TFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMIS 135

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
                +++ + +VL +C          G ++H  V+K        V+  L+ MY  C + 
Sbjct: 136 ERVPPSQFTVSNVLSSC--AANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDP 193

Query: 140 T------------------------------DCARRIFEEIETRDLISWNSIISVYSQRG 169
                                          + A   FE++  RD++SWNS+IS YSQ+G
Sbjct: 194 VIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQG 253

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLS 229
             +    +FS+M  E    SLKP+ +T  S+++A  +  L    + +QI A + +A   +
Sbjct: 254 YNLEALAIFSKMLNEP---SLKPDNFTLASILSACAN--LEKLNIGKQIHAYILRAETET 308

Query: 230 DLYVGSALVSGFARLGNFYYARKIFE--QMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGL 287
              VG+AL+S +A+ G    AR I E  +    N+++   L++G                
Sbjct: 309 SGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDG---------------- 352

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
                        Y K G +  +R +F  +  +D V+W  MI G  QNG + +A+  F  
Sbjct: 353 -------------YTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRL 399

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M  +G   ++++L + LS  +SL  +  G+QIH   +K G  S  SV+NAL+++YA  G 
Sbjct: 400 MVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGN 459

Query: 408 LSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
           ++   +VF L   + + VSW S+I A A    L  EA+  +  M   G  P+ +T++ +L
Sbjct: 460 INVAKRVFDLPNGKKEIVSWTSMIMALAQ-HGLGKEAINLFERMLSVGMKPDHITYVGVL 518

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENA-LLSCYGKCGEMDDCEKIFARMSERRD 525
           +A +   + + G + +  + + +    T    A ++  YG+ G + +       M    D
Sbjct: 519 SACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPD 578

Query: 526 EVSWNSMISG-YIH-NELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
            ++W S+++   IH N  L K       ++  G    +   A V SAC
Sbjct: 579 NIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSAC 626



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 181/442 (40%), Gaps = 97/442 (21%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD---------------------- 44
            H  ++K G    V +  +L+N+Y + GD   A  +FD                      
Sbjct: 164 IHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQ 223

Query: 45  ---------EMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL-LNRYALGSVLR 94
                    +MPDR+ VSW  ++SGY+ +G + EA  +F +M+    L  + + L S+L 
Sbjct: 224 FELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILS 283

Query: 95  ACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC------------------ 136
           AC          G Q+H  +L++     G V N LI+MY                     
Sbjct: 284 ACANL--EKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNL 341

Query: 137 --------------LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
                         L +   AR IF ++  RD+++W ++I  Y Q G      +LF  M 
Sbjct: 342 NIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMV 401

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            EG     +PN YT  ++++   SS L+     +QI A   KAG  S   V +AL++ +A
Sbjct: 402 NEG----PEPNSYTLAAMLSV--SSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYA 455

Query: 243 RLGNFYYARKIFE-QMIQKNVVSMNGLMEGRRK---GKEVHGYLIRSGLFDMVAVGN--- 295
           + GN   A+++F+    +K +VS   ++    +   GKE      R     M++VG    
Sbjct: 456 KTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFER-----MLSVGMKPD 510

Query: 296 -----GLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNF 345
                G+++     G ++  R  +  M     +      +  MI    + G  +EA +  
Sbjct: 511 HITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFI 570

Query: 346 CAMRRDGLMSSNFSLISTLSSC 367
            +M    +   N +  S L+SC
Sbjct: 571 ESM---PIEPDNIAWGSLLASC 589



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 124/284 (43%), Gaps = 63/284 (22%)

Query: 454 GWSPNGVTFI-NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           G SP    F  +IL  +        G  VH Q+IK  +     + N L++ Y K G +  
Sbjct: 4   GNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRF 63

Query: 513 CEKIFARMS----------------------ERR--------DEVSWNSMISGYIHNELL 542
              +F  M                        RR        D VSW ++I GY    L 
Sbjct: 64  AHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLF 123

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
             A+ +   M+        FT + VLS+CA+  TL+ G ++H+  V+  L   V + ++L
Sbjct: 124 DNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSL 183

Query: 603 VDMYSKC-------------------------------GRIDYASRFFDLMPVRNVYSWN 631
           ++MY+KC                               G+ + A+  F+ MP R++ SWN
Sbjct: 184 LNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWN 243

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSH 674
           SMISGY++ G+  +AL +FS+M  +  L PD+ T   +LSAC++
Sbjct: 244 SMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACAN 287



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 143/307 (46%), Gaps = 17/307 (5%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           ++    +L++ Y ++G++  A ++F+++ DR+ V+W  ++ GY   G+ N+A ++F+ MV
Sbjct: 342 NIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMV 401

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             G   N Y L ++L        +  + G Q+H   +K+ ++    V+N LIAMY     
Sbjct: 402 NEGPEPNSYTLAAMLSVSSSL--TILEHGKQIHASAIKAGESSTPSVTNALIAMYAKT-G 458

Query: 139 STDCARRIFEEIE-TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
           + + A+R+F+     ++++SW S+I   +Q G       LF RM   G    +KP+  T+
Sbjct: 459 NINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVG----MKPDHITY 514

Query: 198 -GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
            G L    +  ++        ++  V +       Y  + ++  + R G    A    E 
Sbjct: 515 VGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHY--ACMIDLYGRAGLLQEAYLFIES 572

Query: 257 M-IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN-----GLVNMYAKCGTIDDS 310
           M I+ + ++   L+   +  K      + +    ++  GN      L N+Y+ CG  +++
Sbjct: 573 MPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENA 632

Query: 311 RSVFRFM 317
               + M
Sbjct: 633 AQTRKLM 639



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 111/261 (42%), Gaps = 38/261 (14%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           FA +L     +     G  VH   ++  L   V + + L+  Y+K G + +A   FD MP
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
           +++ +SWN++ISGYA+ G+ + +  L  +M    P  D V++  ++   +  GL D    
Sbjct: 73  LKSTFSWNTLISGYAKQGNFEVSRRLLYEM----PDCDPVSWTAIIVGYNQFGLFDNAIW 128

Query: 684 HFKSMSQVYGLIPQLEQF-------SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
            F  M  +   +P   QF       SC  +     G   KI  F+ K+            
Sbjct: 129 MFAKM--ISERVPP-SQFTVSNVLSSCAANQTLDIGR--KIHSFVVKLG----------- 172

Query: 737 LGACCRANCRKTELGRKA-----ANMLFE-MEPQNAVNYVLLANMYASGGKWEDVAKARK 790
           LG+C         +  K      A ++F+ M  +N   +  L ++Y   G++E  A   +
Sbjct: 173 LGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFE 232

Query: 791 AMKEAEVKKEAGCSWVTMKDG 811
            M + ++      SW +M  G
Sbjct: 233 KMPDRDI-----VSWNSMISG 248


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 289/875 (33%), Positives = 467/875 (53%), Gaps = 54/875 (6%)

Query: 46  MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG-PSGF 104
           M DR   +W   VSG    G    A +M + M   G  L+ +AL S++ AC+  G   G 
Sbjct: 1   MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 105 KFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISV 164
             G  +H L  ++    +  +   L+ +YGS    +D A+R+F E+  R+++SW +++  
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSD-AQRLFWEMPERNVVSWTALMVA 119

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
            S  G      + + +M+R+G    +  N   F ++++   S  L       Q+ + V  
Sbjct: 120 LSSNGYLEEALRAYRQMRRDG----VPCNANAFATVVSLCGS--LENEVPGLQVASQVIV 173

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM--------------- 269
           +GL + + V ++L++ F  LG  + A K+F++M + + +S N ++               
Sbjct: 174 SGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLV 233

Query: 270 ------EGRRK--------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
                  G R                     G  +H   +RS L   V V N LVNMY+ 
Sbjct: 234 FSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSA 293

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
            G + D+  +F  M  +D +SWNTMIS   QN    +A+     +       ++ +  S 
Sbjct: 294 AGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSA 353

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L +C+S G ++ G+ +H   L+L L  ++ V N+L+++Y     +    KVF  MP HD 
Sbjct: 354 LGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDI 413

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA-ASSFSMGKLGHQVH 482
           VS+N +IG +A  E   ++A++ +  MR AG  PN +T INI  + ASS  +   G  +H
Sbjct: 414 VSYNVLIGGYAVLED-GTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLH 472

Query: 483 AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
           A +I+    ++  + N+L++ Y KCG ++    IF  ++ + + VSWN++I+  +     
Sbjct: 473 AYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNK-NIVSWNAIIAANVQLGHG 531

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
            +A+ L   M   G +LD    A  LS+CAS+A+LE GM++H  G+++ L+ D  + +A 
Sbjct: 532 EEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAA 591

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           +DMY KCG++D   +      +R    WN++ISGYA++G+  +A   F QM   G  PD+
Sbjct: 592 MDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDY 651

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFIN 722
           VTFV +LSACSHAGLVD+G  ++ SM+  +G+ P ++   C+VDLLGR G   + E+FI 
Sbjct: 652 VTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIE 711

Query: 723 KMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKW 782
           +MP+ PN LIWR++L +  R + +  E+GRK A  L E++P +   YVLL+N+YA+  +W
Sbjct: 712 EMPVLPNDLIWRSLLSS-SRTH-KNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARW 769

Query: 783 EDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDA 842
            DV K R  MK   + K   CSW+ +K+ V  F  GD  H   + IY KL E+  K+R+ 
Sbjct: 770 ADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREV 829

Query: 843 GYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL 877
           GY+  T  AL D + E KE  +  HSEK+A+A+ L
Sbjct: 830 GYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGL 864



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 187/688 (27%), Positives = 327/688 (47%), Gaps = 75/688 (10%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H    + G   +V++   L+++Y   G ++ A +LF EMP+RN VSW  ++   +  G 
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGY 125

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA + +++M R G   N  A  +V+  C          G+QV   V+ S       V+
Sbjct: 126 LEEALRAYRQMRRDGVPCNANAFATVVSLCGSL--ENEVPGLQVASQVIVSGLQNQVSVA 183

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI M+G+     D A ++F+ +E  D ISWN++IS+YS +G     F +FS M+  G 
Sbjct: 184 NSLITMFGNLGRVHD-AEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGL 242

Query: 187 RYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           R    P+  T  SL++   SS     GS     I ++  ++ L S + V +ALV+ ++  
Sbjct: 243 R----PDATTLCSLMSVCASSDHFSHGS----GIHSLCLRSSLDSSVTVINALVNMYSAA 294

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------ 274
           G    A  +F  M +++++S N ++    +                              
Sbjct: 295 GKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSAL 354

Query: 275 -----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      GK VH  +++  L   + VGN L+ MY KC +++D+  VF+ M   D V
Sbjct: 355 GACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIV 414

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM-LGQQIHGE 382
           S+N +I G        +A+  F  MR  G+  +  ++I+   S AS   +   G+ +H  
Sbjct: 415 SYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAY 474

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            ++ G  SD  V+N+L+++YA  G L     +F  +   + VSWN++I A         E
Sbjct: 475 IIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQL-GHGEE 533

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           A+K ++DM+ AG   + V     L++ +S +  + G Q+H   +K  + +++ + NA + 
Sbjct: 534 ALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMD 593

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            YGKCG+MD+  ++    + R  +  WN++ISGY       +A      M+  G++ D+ 
Sbjct: 594 MYGKCGKMDEMLQVVPDQAIRPQQC-WNTLISGYAKYGYFKEAEETFKQMVATGRKPDYV 652

Query: 563 TFATVLSACASVATLERGMEVH---------ACGVRACLEFDVVIGSALVDMYSKCGRID 613
           TF  +LSAC+    +++G++ +         + G++ C+         +VD+  + GR  
Sbjct: 653 TFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCV--------CIVDLLGRLGRFA 704

Query: 614 YASRFFDLMPV-RNVYSWNSMISGYARH 640
            A +F + MPV  N   W S++S    H
Sbjct: 705 EAEKFIEEMPVLPNDLIWRSLLSSSRTH 732



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 134/569 (23%), Positives = 239/569 (42%), Gaps = 90/569 (15%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   L+      V + N L+N+Y   G L+ A  LF  M  R+ +SW  ++S Y     
Sbjct: 268 IHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCN 327

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           S +A K   ++       N     S L AC    P     G  VH +VL+ +   + LV 
Sbjct: 328 STDALKTLGQLFHTNESPNHLTFSSALGACSS--PGALIDGKMVHAIVLQLSLQRNLLVG 385

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI MYG C  S + A ++F+ + T D++S+N +I  Y+   D     ++FS M+  G 
Sbjct: 386 NSLITMYGKC-NSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAG- 443

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              +KPN  T  + I  +++S        + + A + + G LSD YV ++L++ +A+ GN
Sbjct: 444 ---IKPNYITMIN-IHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGN 499

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGR---------------------------------- 272
              +  IF  +  KN+VS N ++                                     
Sbjct: 500 LESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSS 559

Query: 273 -------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                   +G ++HG  ++SGL     V N  ++MY KCG +D+   V      +    W
Sbjct: 560 CASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCW 619

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           NT+ISG  + G ++EA   F  M   G      + ++ LS+C+  G +            
Sbjct: 620 NTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLV------------ 667

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
              D  +   N++ S +  +  +  C+ +  L+           +G FA++E  + E   
Sbjct: 668 ---DKGIDYYNSMASSFGVSPGIKHCVCIVDLLGR---------LGRFAEAEKFIEEMPV 715

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS-CY 504
                      PN + + ++L+++ +    ++G +   ++++ +  +++     LLS  Y
Sbjct: 716 L----------PNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAY--VLLSNLY 763

Query: 505 GKCGEMDDCEKIFARMS----ERRDEVSW 529
                  D +K+ + M      +R   SW
Sbjct: 764 ATNARWADVDKLRSHMKTININKRPACSW 792



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 31/283 (10%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D K+ H  +L+     ++ + N+LI +Y +   +  A K+F  MP  + VS+  ++ GY 
Sbjct: 365 DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYA 424

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                 +A ++F  M  AG   N   + ++             +G  +H  ++++    D
Sbjct: 425 VLEDGTKAMQVFSWMRSAGIKPNYITMINI-HGSFASSNDLHNYGRPLHAYIIRTGFLSD 483

Query: 123 GLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
             V+N LI MY  C  LES+     IF  I  ++++SWN+II+   Q G      KLF  
Sbjct: 484 EYVANSLITMYAKCGNLESS---TNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFID 540

Query: 181 MQREGF---RYSLKPNEYTFGSLIT----------AAYSSVLSGSYLLQQILAMVKKAGL 227
           MQ  G    R  L     +  SL +             S + S SY++   + M  K G 
Sbjct: 541 MQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGK 600

Query: 228 LSDLY------------VGSALVSGFARLGNFYYARKIFEQMI 258
           + ++               + L+SG+A+ G F  A + F+QM+
Sbjct: 601 MDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMV 643


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 281/894 (31%), Positives = 478/894 (53%), Gaps = 62/894 (6%)

Query: 46  MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFK 105
           M  R + S    ++G+       +   +F +  R    L        LRAC+  G   ++
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRR-WQ 59

Query: 106 FGMQVHCLVLKSNQTFDGLVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSII 162
              ++H   +        +V N+LI +Y   G  L     ARR+FEE+  RD +SW +++
Sbjct: 60  VVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLP----ARRVFEELSARDNVSWVAML 115

Query: 163 SVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMV 222
           S Y+Q G       L+ +M R G    + P  Y   S++++   + L     L  I A  
Sbjct: 116 SGYAQNGLGEEALGLYRQMHRAG----VVPTPYVLSSVLSSCTKAELFAQGRL--IHAQG 169

Query: 223 KKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------- 272
            K G  S+++VG+A+++ + R G+F  A ++F  M  ++ V+ N L+ G           
Sbjct: 170 YKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHAL 229

Query: 273 -------------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
                                          +KG ++H YL ++G+     +   L+++Y
Sbjct: 230 EIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLY 289

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
            KCG ++ +  +F      + V WN M+    Q     ++   FC M+  G+  + F+  
Sbjct: 290 VKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYP 349

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
             L +C     I LG+QIH   +K G +SD+ VS  L+ +Y+  G+L +  +V  ++ E 
Sbjct: 350 CILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK 409

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D VSW S+I  +   E    +A+  + +M++ G  P+ +   + ++  +  +  + G Q+
Sbjct: 410 DVVSWTSMIAGYVQHEC-CKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQI 468

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           HA++     + + +I NAL++ Y +CG + +    F  + E +DE++WN ++SG+  + L
Sbjct: 469 HARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEI-EHKDEITWNGLVSGFAQSGL 527

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +A+ +   M Q G + + FTF + LSA A++A +++G ++HA  ++    F+  +G+A
Sbjct: 528 HEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA 587

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+ +Y KCG  + A   F  M  RN  SWN++I+  ++HG G +AL LF QMK +G  P+
Sbjct: 588 LISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPN 647

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            VTF+GVL+ACSH GLV+EG  +FKSMS  YG+ P+ + ++C++D+ GRAG+LD+ ++FI
Sbjct: 648 DVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFI 707

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
            +MPI  ++++WRT+L AC     +  E+G  AA  L E+EP ++ +YVLL+N YA   K
Sbjct: 708 EEMPIAADAMVWRTLLSAC--KVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEK 765

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           W +  + RK M++  V+KE G SW+ +K+ VH F  GD  HP  + IY  L  +N ++  
Sbjct: 766 WANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAK 825

Query: 842 AGYVPQTKFALF-DLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRV 893
            GY  Q K+ LF D E E ++     HSEK+AV F +++    +P+R++KNLRV
Sbjct: 826 VGY-KQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878



 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 199/681 (29%), Positives = 340/681 (49%), Gaps = 62/681 (9%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H + +  G      + N LI++Y + G +  A ++F+E+  R++VSW  ++SGY   G+
Sbjct: 64  IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA  ++++M RAG +   Y L SVL +C +     F  G  +H    K     +  V 
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKA--ELFAQGRLIHAQGYKHGFCSEIFVG 181

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N +I +Y  C  S   A R+F ++  RD +++N++IS ++Q G      ++F  MQ  G 
Sbjct: 182 NAVITLYLRC-GSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG- 239

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              L P+  T  SL+ A  S  L       Q+ + + KAG+ SD  +  +L+  + + G+
Sbjct: 240 ---LSPDCVTISSLLAACAS--LGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGD 294

Query: 247 FYYARKIFEQMIQKNVVSMNGLM---------------------EGRRK----------- 274
              A  IF    + NVV  N ++                      G R            
Sbjct: 295 VETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRT 354

Query: 275 ---------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    G+++H   +++G    + V   L++MY+K G ++ +R V   +  KD VSW
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
            +MI+G  Q+ C ++A+  F  M++ G+   N  L S +S CA +  +  G QIH     
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G   DVS+ NAL++LYA  G +      F  +   D+++WN ++  FA S  L  EA+K
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQS-GLHEEALK 533

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            ++ M ++G   N  TF++ L+A+++ +  K G Q+HA+VIK   + ET + NAL+S YG
Sbjct: 534 VFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYG 593

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           KCG  +D +  F+ MSE R+EVSWN++I+    +    +A++L   M + G + +  TF 
Sbjct: 594 KCGSFEDAKMEFSEMSE-RNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFI 652

Query: 566 TVLSACASVATLERGMEVHAC-----GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
            VL+AC+ V  +E G+          G+R   +    +    +D++ + G++D A +F +
Sbjct: 653 GVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACV----IDIFGRAGQLDRAKKFIE 708

Query: 621 LMPV-RNVYSWNSMISGYARH 640
            MP+  +   W +++S    H
Sbjct: 709 EMPIAADAMVWRTLLSACKVH 729



 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 160/574 (27%), Positives = 282/574 (49%), Gaps = 52/574 (9%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +L H Q  KHGF  ++F+ N +I +Y+R G    A ++F +MP R++V++  ++SG+  
Sbjct: 162 GRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQ 221

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G    A ++F+EM  +G   +   + S+L AC   G    + G Q+H  + K+  + D 
Sbjct: 222 CGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLG--DLQKGTQLHSYLFKAGISSDY 279

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           ++   L+ +Y  C +  + A  IF   +  +++ WN ++  + Q  D    F+LF +MQ 
Sbjct: 280 IMEGSLLDLYVKCGD-VETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQA 338

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G R    PN++T+  ++     +      L +QI ++  K G  SD+YV   L+  +++
Sbjct: 339 AGIR----PNQFTYPCILRTC--TCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSK 392

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG-------------------------------- 271
            G    AR++ E + +K+VVS   ++ G                                
Sbjct: 393 YGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASA 452

Query: 272 ---------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                     R+G ++H  +  SG    V++ N LVN+YA+CG I ++ S F  +  KD 
Sbjct: 453 ISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDE 512

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           ++WN ++SG  Q+G +EEA+  F  M + G+  + F+ +S LS+ A+L  I  G+QIH  
Sbjct: 513 ITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHAR 572

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            +K G   +  V NAL+SLY   G        F  M E ++VSWN++I + +     + E
Sbjct: 573 VIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGL-E 631

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALL 501
           A+  +  M++ G  PN VTFI +LAA S   + + G     +   +Y +         ++
Sbjct: 632 ALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVI 691

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             +G+ G++D  +K    M    D + W +++S 
Sbjct: 692 DIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSA 725



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 49/99 (49%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H +++K G +++  + N LI++Y + G    A   F EM +RN VSW  I++  
Sbjct: 564 KQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSC 623

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           +  G   EA  +F +M + G   N      VL AC   G
Sbjct: 624 SQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVG 662


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 256/662 (38%), Positives = 389/662 (58%), Gaps = 6/662 (0%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+++HG++++SG  +  +VGN LV  Y K   +D +R VF  M  +D +SWN++I+G   
Sbjct: 63  GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 122

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG  E+ +  F  M   G+     +++S  + CA    I LG+ +H  G+K     +   
Sbjct: 123 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 182

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            N LL +Y+  G L     VF  M +   VS+ S+I  +A  E L  EAVK + +M   G
Sbjct: 183 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYA-REGLAGEAVKLFEEMEEEG 241

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
            SP+  T   +L   + + +   G +VH  + + ++  +  + NAL+  Y KCG M + E
Sbjct: 242 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 301

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACAS 573
            +F+ M   +D +SWN++I GY  N    +A++L   +++  +   D  T A VL ACAS
Sbjct: 302 LVFSEM-RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 360

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           ++  ++G E+H   +R     D  + ++LVDMY+KCG +  A   FD +  +++ SW  M
Sbjct: 361 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 420

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I+GY  HG G +A+ LF+QM+  G   D ++FV +L ACSH+GLVDEG++ F  M     
Sbjct: 421 IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK 480

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           + P +E ++C+VD+L R G+L K   FI  MPI P++ IW  +L   CR +    +L  K
Sbjct: 481 IEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG-CRIH-HDVKLAEK 538

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
            A  +FE+EP+N   YVL+AN+YA   KWE V + RK + +  ++K  GCSW+ +K  V+
Sbjct: 539 VAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVN 598

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
           +FVAGD S+PE + I   L+++  +M + GY P TK+AL D E   KE+ +  HSEK+A+
Sbjct: 599 IFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAM 658

Query: 874 AF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           A  +++      IR+ KNLRVCGDCH   KF+SK+  REIVLRDSNRFH F DG CSC  
Sbjct: 659 ALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRG 718

Query: 933 YW 934
           +W
Sbjct: 719 FW 720



 Score =  187 bits (475), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 201/397 (50%), Gaps = 16/397 (4%)

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           WN +++ L ++G +  +I  F  M   G+   +++      S +SL  +  G+Q+HG  L
Sbjct: 12  WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 71

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           K G     SV N+L++ Y     +    KVF  M E D +SWNS+I  +  S  L  + +
Sbjct: 72  KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV-SNGLAEKGL 130

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
             ++ M  +G   +  T +++ A  +   +  LG  VH+  +K   + E    N LL  Y
Sbjct: 131 SVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMY 190

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            KCG++D  + +F  MS+ R  VS+ SMI+GY    L  +A+ L   M + G   D +T 
Sbjct: 191 SKCGDLDSAKAVFREMSD-RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 249

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
             VL+ CA    L+ G  VH       L FD+ + +AL+DMY+KCG +  A   F  M V
Sbjct: 250 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 309

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDEGFK 683
           +++ SWN++I GY+++ + ++AL+LF+ +  +    PD  T   VL AC+     D+G  
Sbjct: 310 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG-- 367

Query: 684 HFKSMSQVYGLIPQLEQFS------CMVDLLGRAGEL 714
                 +++G I +   FS       +VD+  + G L
Sbjct: 368 -----REIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 399



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/542 (25%), Positives = 262/542 (48%), Gaps = 60/542 (11%)

Query: 147 FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS 206
           F+E++    + WN +++  ++ GD      LF +M   G    ++ + YTF S ++ ++S
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG----VEMDSYTF-SCVSKSFS 55

Query: 207 SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN 266
           S L   +  +Q+   + K+G      VG++LV+ + +      ARK+F++M +++V+S N
Sbjct: 56  S-LRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWN 114

Query: 267 GLMEG------RRKGKEVHGYLIRSGL----------------FDMVAVG---------- 294
            ++ G        KG  V   ++ SG+                  ++++G          
Sbjct: 115 SIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKA 174

Query: 295 ---------NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
                    N L++MY+KCG +D +++VFR M  +  VS+ +MI+G  + G   EA+  F
Sbjct: 175 CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLF 234

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             M  +G+    +++ + L+ CA    +  G+++H    +  L  D+ VSNAL+ +YA  
Sbjct: 235 EEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC 294

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY-LDMRRAGWSPNGVTFIN 464
           G +     VF  M   D +SWN++IG ++ +    +EA+  + L +    +SP+  T   
Sbjct: 295 GSMQEAELVFSEMRVKDIISWNTIIGGYSKN-CYANEALSLFNLLLEEKRFSPDERTVAC 353

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           +L A +S S    G ++H  +++    ++  + N+L+  Y KCG +     +F  ++  +
Sbjct: 354 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS-K 412

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV- 583
           D VSW  MI+GY  +    +A+ L   M Q G   D  +F ++L AC+    ++ G    
Sbjct: 413 DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF 472

Query: 584 ----HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSMISGYA 638
               H C +   +E    I    VDM ++ G +  A RF + MP+  +   W +++ G  
Sbjct: 473 NIMRHECKIEPTVEHYACI----VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCR 528

Query: 639 RH 640
            H
Sbjct: 529 IH 530



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 204/411 (49%), Gaps = 55/411 (13%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  ILK GF     + N+L+  Y++   + SA K+FDEM +R+ +SW  I++GY   G+
Sbjct: 66  LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGL 125

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           + +   +F +M+ +G  ++   + SV   C +        G  VH + +K+  + +    
Sbjct: 126 AEKGLSVFVQMLVSGIEIDLATIVSVFAGCAD--SRLISLGRAVHSIGVKACFSREDRFC 183

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+ MY  C +  D A+ +F E+  R ++S+ S+I+ Y++ G      KLF  M+ EG 
Sbjct: 184 NTLLDMYSKCGD-LDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG- 241

Query: 187 RYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
              + P+ YT  +++   A Y  +  G    +++   +K+  L  D++V +AL+  +A+ 
Sbjct: 242 ---ISPDVYTVTAVLNCCARYRLLDEG----KRVHEWIKENDLGFDIFVSNALMDMYAKC 294

Query: 245 GNFYYARKIFEQMIQKNVVSMNG--------------------LMEGRR----------- 273
           G+   A  +F +M  K+++S N                     L+E +R           
Sbjct: 295 GSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACV 354

Query: 274 -----------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                      KG+E+HGY++R+G F    V N LV+MYAKCG +  +  +F  +  KD 
Sbjct: 355 LPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDL 414

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           VSW  MI+G   +G  +EAI  F  MR+ G+ +   S +S L +C+  G +
Sbjct: 415 VSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLV 465



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 144/538 (26%), Positives = 250/538 (46%), Gaps = 44/538 (8%)

Query: 43  FDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPS 102
           FDE+    ++ W  +++     G  + +  +FK+M+ +G  ++ Y    V ++       
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL--R 58

Query: 103 GFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSII 162
               G Q+H  +LKS       V N L+A Y    +  D AR++F+E+  RD+ISWNSII
Sbjct: 59  SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN-QRVDSARKVFDEMTERDVISWNSII 117

Query: 163 SVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG--------SLITAAYSSVLSGSY- 213
           + Y   G       +F +M   G    L      F         SL  A +S  +   + 
Sbjct: 118 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 177

Query: 214 ----LLQQILAMVKKAGLL----------SDLYVGS--ALVSGFARLGNFYYARKIFEQM 257
                   +L M  K G L          SD  V S  ++++G+AR G    A K+FE+M
Sbjct: 178 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 237

Query: 258 ----IQKNVVSMNGLME--GRRK----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
               I  +V ++  ++    R +    GK VH ++  + L   + V N L++MYAKCG++
Sbjct: 238 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 297

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIS-TLSS 366
            ++  VF  M  KD +SWNT+I G  +N    EA+  F  +  +   S +   ++  L +
Sbjct: 298 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 357

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSW 426
           CASL     G++IHG  ++ G  SD  V+N+L+ +YA  G L     +F  +   D VSW
Sbjct: 358 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 417

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
             +I  +        EA+  +  MR+AG   + ++F+++L A S   +   G +    ++
Sbjct: 418 TVMIAGYG-MHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF-NIM 475

Query: 487 KYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
           ++    E T+E+   ++    + G++    +    M    D   W +++ G  IH+++
Sbjct: 476 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDV 533



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 128/257 (49%), Gaps = 11/257 (4%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H  I ++   +D+F+ N L+++Y + G +  A  +F EM  ++ +SW  I+ GY+
Sbjct: 264 EGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYS 323

Query: 63  HKGMSNEACKMFKEMVRAG-FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
               +NEA  +F  ++    F  +   +  VL AC     S F  G ++H  ++++    
Sbjct: 324 KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL--SAFDKGREIHGYIMRNGYFS 381

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V+N L+ MY  C  +   A  +F++I ++DL+SW  +I+ Y   G       LF++M
Sbjct: 382 DRHVANSLVDMYAKC-GALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM 440

Query: 182 QREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           ++ G    ++ +E +F SL+ A ++S ++   +    I+    K     + Y  + +V  
Sbjct: 441 RQAG----IEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY--ACIVDM 494

Query: 241 FARLGNFYYARKIFEQM 257
            AR G+   A +  E M
Sbjct: 495 LARTGDLIKAYRFIENM 511


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 282/790 (35%), Positives = 431/790 (54%), Gaps = 102/790 (12%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGN----FYYARKIFEQMIQKNVVSMNGLMEG 271
           + I A   KAGLL   Y+ + L++ +A +G     F  AR +F+ +              
Sbjct: 229 RAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDI-------------- 274

Query: 272 RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
                    Y  R+         N L+++YAK G + D+  VF  M  +D+VSW  MI G
Sbjct: 275 --------PYARRNAF-----TWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVG 321

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
           L+++G + +A+  F  M  +G   S F+L + LSSCA++    +G+++H   +KLGL S 
Sbjct: 322 LNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSC 381

Query: 392 VSVSNALL-------------------------------SLYADAGYLSRCLKVFFLMPE 420
           V V+N++L                               SLY   G +   + +F  M E
Sbjct: 382 VPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVE 441

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG-WSPNGVTFINILAAASSFSMGKLGH 479
              VSWN++I  + +   L   A+K++  M  A    P+  T  ++L+A ++  M K+G 
Sbjct: 442 RSIVSWNTIIAGY-NQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGK 500

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI-------------FARMSE---- 522
           Q+H+ +++  +   + I NAL+S Y K G ++   +I             F  + E    
Sbjct: 501 QMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVK 560

Query: 523 ---------------RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
                           RD ++W +MI GY  N    +AM L   M+  G   +  T A V
Sbjct: 561 LGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAV 620

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN- 626
           LSACAS+A L+ G ++H   +R+  E  V + +A++ +Y++ G +  A R FD +  R  
Sbjct: 621 LSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKE 680

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
             +W SMI   A+HG G++A+ LF +M   G  PDH+T+VGVLSAC+HAG VD+G ++++
Sbjct: 681 TITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYE 740

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANC 745
            M   +G++PQ+  ++CMVDL  RAG L +  EFI +MP+ P++++W ++L AC  R N 
Sbjct: 741 QMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNA 800

Query: 746 RKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSW 805
              EL   AA  L  ++P N+  Y  LAN+Y++ G+W D A+  K  K+  VKKE G SW
Sbjct: 801 DLAEL---AAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSW 857

Query: 806 VTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVS 865
             ++  VHVF A D  HP++D IY K  E+ ++++ AG+VP     L D++ E KE+L+S
Sbjct: 858 THVRGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLS 917

Query: 866 YHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFN 924
            HSEK+A+AF +++   K  +RIMKNLRVC DCH+A KFISK V REI++RD+ RFHHF 
Sbjct: 918 RHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFR 977

Query: 925 DGKCSCGDYW 934
           DG CSC DYW
Sbjct: 978 DGYCSCKDYW 987



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 185/747 (24%), Positives = 339/747 (45%), Gaps = 146/747 (19%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           + F  N+L+++Y + G L  A  +F EMPDR++VSW  ++ G    G   +A K F +MV
Sbjct: 280 NAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMV 339

Query: 79  RAGFLLNRYALGSVLRAC---QECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS 135
             GF  +++ L +VL +C   + CG      G +VH  V+K   +    V+N ++ MYG 
Sbjct: 340 SEGFAPSQFTLTNVLSSCAAMEACG-----VGRKVHPFVVKLGLSSCVPVANSVLYMYGK 394

Query: 136 CLESTDCARRIFEEIETRDLISWNSIISVYSQRGD---TISVF----------------- 175
           C ++ + AR +FE ++ R + SWN ++S+Y+ +G     +S+F                 
Sbjct: 395 CGDA-ETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAG 453

Query: 176 -----------KLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
                      K FSRM       S++P+ +T  S+++A  +  L    + +Q+ + + +
Sbjct: 454 YNQNGLDGMALKFFSRMLSAS---SMEPDAFTVTSVLSACAN--LRMLKMGKQMHSYILR 508

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI--QKNVVSMNGLMEGRRKGKEVHGYL 282
            G+     + +AL+S +A+ G+   AR+I +Q +    NV+S   L+EG           
Sbjct: 509 TGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEG----------- 557

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
                             Y K G    +R +F  M  +D ++W  MI G  QNG  +EA+
Sbjct: 558 ------------------YVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAM 599

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
             F +M   G   ++ +L + LS+CASL ++  G+QIH + ++   +  VSVSNA++++Y
Sbjct: 600 ELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVY 659

Query: 403 ADAGYLSRCLKVF-FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           A +G +    +VF  +    + ++W S+I A A    L  +AV  + +M R G  P+ +T
Sbjct: 660 ARSGSVPLARRVFDQICWRKETITWTSMIVAMAQ-HGLGEQAVVLFEEMVRVGVKPDHIT 718

Query: 462 FINILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           ++ +L+A +       G + + Q+  ++ +  + +    ++  + + G + +  +   RM
Sbjct: 719 YVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRM 778

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
               D V W S+++                  +++   L       +LS           
Sbjct: 779 PVAPDTVVWGSLLAA---------------CRVRKNADLAELAAGKLLS----------- 812

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV-----YSWNSMIS 635
           ++ H  G            SAL ++YS CGR + A+R + L   + V     +SW  +  
Sbjct: 813 IDPHNSGAY----------SALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRG 862

Query: 636 GYARHGHGD-----------KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK- 683
                G  D           KA  ++ ++K  G +PD       L++  H   VD+  K 
Sbjct: 863 KVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPD-------LNSVLHD--VDDELKE 913

Query: 684 -----HFKSMSQVYGLIPQLEQFSCMV 705
                H + ++  +GLI   E+ +  +
Sbjct: 914 ELLSRHSEKLAIAFGLISTPEKTTLRI 940



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 143/616 (23%), Positives = 260/616 (42%), Gaps = 136/616 (22%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC---ARRIFEEIE--TRDLISWNSI 161
           G  +H   +K+       + N L+A Y S   S  C   AR +F++I    R+  +WNS+
Sbjct: 228 GRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIPYARRNAFTWNSL 287

Query: 162 ISVYSQRGDTISVFKLFSRM-QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILA 220
           +S+Y++ G       +F+ M  R+   +++                              
Sbjct: 288 LSLYAKSGRLPDAHVVFAEMPDRDAVSWTI------------------------------ 317

Query: 221 MVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK----------NVVSMNGLME 270
                           ++ G  R G F+ A K F  M+ +          NV+S    ME
Sbjct: 318 ----------------MIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAME 361

Query: 271 GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF-------------- 316
               G++VH ++++ GL   V V N ++ MY KCG  + +R+VF                
Sbjct: 362 ACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVS 421

Query: 317 -----------------MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN-F 358
                            M+ +  VSWNT+I+G +QNG    A+  F  M     M  + F
Sbjct: 422 LYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAF 481

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS--------- 409
           ++ S LS+CA+L  + +G+Q+H   L+ G+     + NAL+S YA +G +          
Sbjct: 482 TVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQA 541

Query: 410 ------------------------RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
                                   +  ++F +M   D ++W ++I  +        EA++
Sbjct: 542 VVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGY-HQNGQNDEAME 600

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            +  M   G  PN  T   +L+A +S +    G Q+H + I+       ++ NA+++ Y 
Sbjct: 601 LFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYA 660

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           + G +    ++F ++  R++ ++W SMI     + L  +A+ L   M++ G + DH T+ 
Sbjct: 661 RSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYV 720

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDL 621
            VLSACA    +++G   +    +   E  +V      + +VD++++ G +  A  F   
Sbjct: 721 GVLSACAHAGFVDKGKRYYE---QMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQR 777

Query: 622 MPV-RNVYSWNSMISG 636
           MPV  +   W S+++ 
Sbjct: 778 MPVAPDTVVWGSLLAA 793



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 130/314 (41%), Gaps = 72/314 (22%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K G +  V + N+++ +Y + GD  +A  +F+ M  R+  SW  +VS YTH+G  
Sbjct: 370 HPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRM 429

Query: 68  NEACKMFKEMVR----------AGFLLN----------------------RYALGSVLRA 95
             A  MF+ MV           AG+  N                       + + SVL A
Sbjct: 430 ELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSA 489

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC------------------- 136
           C        K G Q+H  +L++       + N LI+ Y                      
Sbjct: 490 CANL--RMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLN 547

Query: 137 -------------LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
                        L  T  AR IF+ +  RD+I+W ++I  Y Q G      +LF  M  
Sbjct: 548 VISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMIL 607

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G     +PN +T  ++++A  S  L+     +QI     ++     + V +A+++ +AR
Sbjct: 608 IG----PEPNSHTLAAVLSACAS--LAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYAR 661

Query: 244 LGNFYYARKIFEQM 257
            G+   AR++F+Q+
Sbjct: 662 SGSVPLARRVFDQI 675



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 1/97 (1%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRN-SVSWACIVSGYTH 63
           K  H + ++      V + N +I VY R G +  A ++FD++  R  +++W  ++     
Sbjct: 634 KQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQ 693

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G+  +A  +F+EMVR G   +      VL AC   G
Sbjct: 694 HGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAG 730



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 116/268 (43%), Gaps = 40/268 (14%)

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR----IDYA 615
           DH+  A +L  C +      G  +HA  V+A L     + + L+  Y+  G        A
Sbjct: 210 DHY--ARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREA 267

Query: 616 SRFFDLMPV--RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
              FD +P   RN ++WNS++S YA+ G    A  +F++M    P  D V++  ++   +
Sbjct: 268 RCLFDDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEM----PDRDAVSWTIMIVGLN 323

Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD------KIEEFINKMPIT 727
            +G   +  K F  M    G  P   QF+ + ++L     ++      K+  F+ K+ ++
Sbjct: 324 RSGRFWDAVKTFLDMVS-EGFAPS--QFT-LTNVLSSCAAMEACGVGRKVHPFVVKLGLS 379

Query: 728 PNSLIWRTVL---GACCRANCRKTELGRKAANMLFE-MEPQNAVNYVLLANMYASGGKWE 783
               +  +VL   G C  A         + A  +FE M+ ++  ++ ++ ++Y   G+ E
Sbjct: 380 SCVPVANSVLYMYGKCGDA---------ETARAVFERMQVRSVSSWNVMVSLYTHQGRME 430

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDG 811
                 + M E  +      SW T+  G
Sbjct: 431 LAVSMFENMVERSI-----VSWNTIIAG 453


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 256/662 (38%), Positives = 389/662 (58%), Gaps = 6/662 (0%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+++HG++++SG  +  +VGN LV  Y K   +D +R VF  M  +D +SWN++I+G   
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG  E+ +  F  M   G+     +++S  + CA    I LG+ +H  G+K     +   
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            N LL +Y+  G L     VF  M +   VS+ S+I  +A  E L  EAVK + +M   G
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYA-REGLAGEAVKLFEEMEEEG 392

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
            SP+  T   +L   + + +   G +VH  + + ++  +  + NAL+  Y KCG M + E
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACAS 573
            +F+ M   +D +SWN++I GY  N    +A++L   +++  +   D  T A VL ACAS
Sbjct: 453 LVFSEM-RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 511

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           ++  ++G E+H   +R     D  + ++LVDMY+KCG +  A   FD +  +++ SW  M
Sbjct: 512 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 571

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I+GY  HG G +A+ LF+QM+  G   D ++FV +L ACSH+GLVDEG++ F  M     
Sbjct: 572 IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK 631

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           + P +E ++C+VD+L R G+L K   FI  MPI P++ IW  +L   CR +    +L  K
Sbjct: 632 IEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG-CRIH-HDVKLAEK 689

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
            A  +FE+EP+N   YVL+AN+YA   KWE V + RK + +  ++K  GCSW+ +K  V+
Sbjct: 690 VAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVN 749

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
           +FVAGD S+PE + I   L+++  +M + GY P TK+AL D E   KE+ +  HSEK+A+
Sbjct: 750 IFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAM 809

Query: 874 AF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           A  +++      IR+ KNLRVCGDCH   KF+SK+  REIVLRDSNRFH F DG CSC  
Sbjct: 810 ALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRG 869

Query: 933 YW 934
           +W
Sbjct: 870 FW 871



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 227/449 (50%), Gaps = 16/449 (3%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           + GKEV  ++  +G      +G+ L  MY  CG + ++  VF  +  + ++ WN +++ L
Sbjct: 111 KDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNEL 170

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            ++G +  +I  F  M   G+   +++      S +SL  +  G+Q+HG  LK G     
Sbjct: 171 AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERN 230

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
           SV N+L++ Y     +    KVF  M E D +SWNS+I  +  S  L  + +  ++ M  
Sbjct: 231 SVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV-SNGLAEKGLSVFVQMLV 289

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           +G   +  T +++ A  +   +  LG  VH+  +K   + E    N LL  Y KCG++D 
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDS 349

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
            + +F  MS+ R  VS+ SMI+GY    L  +A+ L   M + G   D +T   VL+ CA
Sbjct: 350 AKAVFREMSD-RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
               L+ G  VH       L FD+ + +AL+DMY+KCG +  A   F  M V+++ SWN+
Sbjct: 409 RYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNT 468

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           +I GY+++ + ++AL+LF+ +  +    PD  T   VL AC+     D+G        ++
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG-------REI 521

Query: 692 YGLIPQLEQFS------CMVDLLGRAGEL 714
           +G I +   FS       +VD+  + G L
Sbjct: 522 HGYIMRNGYFSDRHVANSLVDMYAKCGAL 550



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 159/579 (27%), Positives = 270/579 (46%), Gaps = 44/579 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           KD K     I  +GF  D  L + L  +Y   GDL  AS++FDE+    ++ W  +++  
Sbjct: 111 KDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNEL 170

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G  + +  +FK+M+ +G  ++ Y    V ++           G Q+H  +LKS    
Sbjct: 171 AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL--RSVHGGEQLHGFILKSGFGE 228

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V N L+A Y    +  D AR++F+E+  RD+ISWNSII+ Y   G       +F +M
Sbjct: 229 RNSVGNSLVAFYLKN-QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 287

Query: 182 QREGFRYSLKPNEYTFG--------SLITAAYSSVLSGSY-----LLQQILAMVKKAGLL 228
              G    L      F         SL  A +S  +   +         +L M  K G L
Sbjct: 288 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 347

Query: 229 ----------SDLYVGS--ALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLME-- 270
                     SD  V S  ++++G+AR G    A K+FE+M    I  +V ++  ++   
Sbjct: 348 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 407

Query: 271 GRRK----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
            R +    GK VH ++  + L   + V N L++MYAKCG++ ++  VF  M  KD +SWN
Sbjct: 408 ARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWN 467

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIS-TLSSCASLGWIMLGQQIHGEGLK 385
           T+I G  +N    EA+  F  +  +   S +   ++  L +CASL     G++IHG  ++
Sbjct: 468 TIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMR 527

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G  SD  V+N+L+ +YA  G L     +F  +   D VSW  +I  +        EA+ 
Sbjct: 528 NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYG-MHGFGKEAIA 586

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSC 503
            +  MR+AG   + ++F+++L A S   +   G +    ++++    E T+E+   ++  
Sbjct: 587 LFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF-NIMRHECKIEPTVEHYACIVDM 645

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
             + G++    +    M    D   W +++ G  IH+++
Sbjct: 646 LARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDV 684



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 205/424 (48%), Gaps = 7/424 (1%)

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           NT +    ++G  E A+   C   +  +     +L S L  CA    +  G+++      
Sbjct: 65  NTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRG 122

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G   D ++ + L  +Y + G L    +VF  +     + WN ++   A S    S ++ 
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDF-SGSIG 181

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            +  M  +G   +  TF  +  + SS      G Q+H  ++K       ++ N+L++ Y 
Sbjct: 182 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 241

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           K   +D   K+F  M+E RD +SWNS+I+GY+ N L  K +++   M+  G  +D  T  
Sbjct: 242 KNQRVDSARKVFDEMTE-RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIV 300

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           +V + CA    +  G  VH+ GV+AC   +    + L+DMYSKCG +D A   F  M  R
Sbjct: 301 SVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR 360

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
           +V S+ SMI+GYAR G   +A+ LF +M+ +G  PD  T   VL+ C+   L+DEG K  
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG-KRV 419

Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANC 745
               +   L   +   + ++D+  + G + + E   ++M +  + + W T++G   + NC
Sbjct: 420 HEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV-KDIISWNTIIGGYSK-NC 477

Query: 746 RKTE 749
              E
Sbjct: 478 YANE 481


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 292/872 (33%), Positives = 463/872 (53%), Gaps = 60/872 (6%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI-ETRDLISWNSIISVYSQ 167
           ++H LV+          S  LI  Y S   +   +  +F  +   +++  WNSII  +S+
Sbjct: 25  RIHALVISLGLDGSDFFSGKLIDKY-SHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFSK 83

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKA 225
            G      + + +++       + P++YTF S+I A         G  + +QIL M    
Sbjct: 84  NGWFPKALEFYGKLRES----KVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEM---- 135

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------- 272
           G  SDLYVG+ALV  ++R+G    AR++F++M  +++VS N L+ G              
Sbjct: 136 GFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195

Query: 273 ----------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
                                       ++G+ +HG+ ++SG+  +  V NGL+ MY K 
Sbjct: 196 HELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKF 255

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
               D+R VF  M+ +DSV++NTMI G  +    EE++  F     D       ++ S L
Sbjct: 256 SRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE-NLDQFKPDILTVTSVL 314

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +C  L  + L + I+   L+ G   + +V N L+ +YA  G +     VF  M   D V
Sbjct: 315 CACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTV 374

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           SWNS+I  +  S  L+ EA+K +  M       + +T++ +++ ++  +  K G  +H+ 
Sbjct: 375 SWNSIISGYIQSGDLM-EAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSN 433

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
            IK  +  + ++ NAL+  Y KCGE+ D  KIF  M    D V+WN++IS  +       
Sbjct: 434 GIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTL-DTVTWNTVISACVRFGDFAT 492

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
            + +   M +     D  TF   L  CAS+A    G E+H C +R   E ++ IG+AL++
Sbjct: 493 GLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
           MYSKCG ++ + R F+ M  R+V +W  MI  Y  +G G+KAL  F  M+  G +PD V 
Sbjct: 553 MYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVV 612

Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           F+ ++ ACSH+GLV++G   F+ M   Y + P +E ++C+VDLL R+ ++ K EEFI  M
Sbjct: 613 FIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAM 672

Query: 725 PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
           PI P++ IW +VL AC  +     E   + +  + E+ P +    +L +N YA+  KW+ 
Sbjct: 673 PIEPDASIWASVLRACRTSG--DMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDK 730

Query: 785 VAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGY 844
           V+  RK++++  +KK  G SW+ +   VHVF +GD+S P+ + I++ L+ L   M   GY
Sbjct: 731 VSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKSLEILYSLMAKEGY 790

Query: 845 VPQTKFALFDL-EPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFK 902
           +P ++    +L E E K  L+  HSE++A+AF +L      P+++MKNLRVC DCH   K
Sbjct: 791 IPDSREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCSDCHEVTK 850

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            ISKIVGREI++RD+NRFH F DG CSC D W
Sbjct: 851 LISKIVGREILVRDANRFHLFKDGICSCKDRW 882



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 150/509 (29%), Positives = 255/509 (50%), Gaps = 58/509 (11%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           L + QIL+ GF  D+++ N L+++Y R+G L+ A ++FDEMP R+ VSW  ++SGY+  G
Sbjct: 127 LVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHG 186

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
              EA +++ E+  +  + + + + SVL A         K G  +H   LKS      +V
Sbjct: 187 YYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLV--VKQGQGLHGFTLKSGVNSVSVV 244

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           +N L+AMY      TD ARR+F+E+  RD +++N++I  Y +        K+F     + 
Sbjct: 245 NNGLLAMYLKFSRPTD-ARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQ- 302

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
                KP+  T  S++ A     L    L + I   + +AG + +  V + L+  +A+ G
Sbjct: 303 ----FKPDILTVTSVLCAC--GHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCG 356

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGR--------------------------------- 272
           +   AR +F  M  K+ VS N ++ G                                  
Sbjct: 357 DMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLIS 416

Query: 273 --------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                   + GK +H   I+SG++  ++V N L++MYAKCG + DS  +F  M   D+V+
Sbjct: 417 LSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVT 476

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           WNT+IS   + G +   +     MR++ ++    + + TL  CASL    LG++IH   L
Sbjct: 477 WNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL 536

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI---GAFADSEALVS 441
           + G +S++ + NAL+ +Y+  G L    +VF  M   D V+W  +I   G + + E    
Sbjct: 537 RFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGE---- 592

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAAS 470
           +A++ ++DM ++G  P+ V FI ++ A S
Sbjct: 593 KALESFVDMEKSGIVPDSVVFIALIYACS 621



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 205/470 (43%), Gaps = 45/470 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H   LK G      + N L+ +Y++      A ++FDEM  R+SV++  ++ GY
Sbjct: 224 KQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGY 283

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
               M  E+ KMF E +   F  +   + SVL AC             ++  +L++    
Sbjct: 284 LKLEMVEESVKMFLENLDQ-FKPDILTVTSVLCACGHL--RDLSLAKYIYNYMLRAGFVL 340

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF--- 178
           +  V N+LI +Y  C +    AR +F  +E +D +SWNSIIS Y Q GD +   KLF   
Sbjct: 341 ESTVKNILIDVYAKCGDMI-TARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399

Query: 179 -------------------SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL----L 215
                              +R+    F   L  N    G  I  + S+ L   Y     +
Sbjct: 400 MIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEV 459

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV----------SM 265
              L +    G L D    + ++S   R G+F    ++  QM +  VV           M
Sbjct: 460 GDSLKIFNSMGTL-DTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPM 518

Query: 266 NGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
              +  +R GKE+H  L+R G    + +GN L+ MY+KCG ++ S  VF  M  +D V+W
Sbjct: 519 CASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTW 578

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
             MI      G  E+A+ +F  M + G++  +   I+ + +C+  G +  G     E +K
Sbjct: 579 TGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACF-EKMK 637

Query: 386 LGLDSDVSVSN--ALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                D  + +   ++ L + +  +S+  +    MP E D   W SV+ A
Sbjct: 638 THYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRA 687



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 207/415 (49%), Gaps = 14/415 (3%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF-FLMPEHD 422
           LSS ++L  +   ++IH   + LGLD     S  L+  Y+     +  L VF  + P  +
Sbjct: 14  LSSSSNLNEL---RRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKN 70

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
              WNS+I AF+ +     +A+++Y  +R +  SP+  TF +++ A +     ++G  V+
Sbjct: 71  VYIWNSIIRAFSKN-GWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129

Query: 483 AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
            Q+++    ++  + NAL+  Y + G +    ++F  M   RD VSWNS+ISGY  +   
Sbjct: 130 KQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPV-RDLVSWNSLISGYSSHGYY 188

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
            +A+ +   +       D FT ++VL A A++  +++G  +H   +++ +    V+ + L
Sbjct: 189 EEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGL 248

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           + MY K  R   A R FD M VR+  ++N+MI GY +    ++++ +F +  LD   PD 
Sbjct: 249 LAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE-NLDQFKPDI 307

Query: 663 VTFVGVLSACSHAGLVDEGF-KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
           +T   VL AC H  L D    K+  +     G + +    + ++D+  + G++    +  
Sbjct: 308 LTVTSVLCACGH--LRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVF 365

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ-NAVNYVLLANM 775
           N M    +++ W +++    ++      +  K   M+  ME Q + + Y++L ++
Sbjct: 366 NSME-CKDTVSWNSIISGYIQSGDLMEAM--KLFKMMMIMEEQADHITYLMLISL 417



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 115/215 (53%), Gaps = 1/215 (0%)

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           A +SS ++ +L  ++HA VI   +         L+  Y           +F R+S  ++ 
Sbjct: 13  ALSSSSNLNEL-RRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNV 71

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
             WNS+I  +  N   PKA+     + +     D +TF +V+ ACA +   E G  V+  
Sbjct: 72  YIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQ 131

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            +    E D+ +G+ALVDMYS+ G +  A + FD MPVR++ SWNS+ISGY+ HG+ ++A
Sbjct: 132 ILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           L ++ +++    +PD  T   VL A ++  +V +G
Sbjct: 192 LEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQG 226


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 271/767 (35%), Positives = 429/767 (55%), Gaps = 66/767 (8%)

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
           ++  Y  +L      ++I   + KA    ++++ + LVS +A+     YAR++F+QM Q+
Sbjct: 14  LSNHYCELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQR 73

Query: 261 NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
           N+ S N L+                               Y+K   + +   VF  M  +
Sbjct: 74  NLYSWNTLLSS-----------------------------YSKLACLPEMERVFHAMPTR 104

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS-LGWIMLGQQI 379
           D VSWN++IS     G   +++  +  M  +G  + N   +ST+   AS  G + LG Q+
Sbjct: 105 DMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQV 164

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGY-------------------------LSRCLKV 414
           HG  +K G  S V V + L+ +Y+  G                          L RC ++
Sbjct: 165 HGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRI 224

Query: 415 ------FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
                 F+ M E D +SW ++I  F  +  L  EA+  + +MR      +  TF ++L A
Sbjct: 225 EDSRQLFYDMQEKDSISWTAMIAGFTQN-GLDREAIDLFREMRLENLEMDQYTFGSVLTA 283

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
                  + G QVHA +I+ +  +   + +AL+  Y KC  +   E +F +M+  ++ VS
Sbjct: 284 CGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMN-CKNVVS 342

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           W +M+ GY  N    +A+ +   M   G   D FT  +V+S+CA++A+LE G + H   +
Sbjct: 343 WTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRAL 402

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
            + L   + + +ALV +Y KCG I+ + R F  M   +  SW +++SGYA+ G  ++ L 
Sbjct: 403 VSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLR 462

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           LF  M   G  PD VTF+GVLSACS AGLV +G + F+SM + + +IP  + ++CM+DL 
Sbjct: 463 LFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLF 522

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
            RAG L++  +FINKMP +P+++ W ++L + CR + R  E+G+ AA  L ++EP N  +
Sbjct: 523 SRAGRLEEARKFINKMPFSPDAIGWASLLSS-CRFH-RNMEIGKWAAESLLKLEPHNTAS 580

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
           Y+LL+++YA+ GKWE+VA  RK M++  ++KE GCSW+  K+ VH+F A D+S+P  D I
Sbjct: 581 YILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQI 640

Query: 829 YEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRI 887
           Y +L++LN KM   GYVP     L D++   K  ++++HSEK+A+AF ++     LPIR+
Sbjct: 641 YSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRV 700

Query: 888 MKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +KNLRVCGDCH+A K+ISKI  REI++RD+ RFH F DG+CSCGD+W
Sbjct: 701 VKNLRVCGDCHNATKYISKITQREILVRDAARFHLFKDGRCSCGDFW 747



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 258/521 (49%), Gaps = 49/521 (9%)

Query: 127 NVLIAMYG--SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           N L++ Y   +CL   +   R+F  + TRD++SWNS+IS Y+ RG  +   K ++ M   
Sbjct: 79  NTLLSSYSKLACLPEME---RVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYN 135

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G       N     +++  A  S     +L  Q+   V K G  S ++VGS LV  +++ 
Sbjct: 136 G---PFNLNRIALSTMLILA--SKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKT 190

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
           G  + AR+ F++M +KNVV                             + N L+    +C
Sbjct: 191 GLVFCARQAFDEMPEKNVV-----------------------------MYNTLIAGLMRC 221

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
             I+DSR +F  M  KDS+SW  MI+G  QNG   EAI  F  MR + L    ++  S L
Sbjct: 222 SRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVL 281

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
           ++C  +  +  G+Q+H   ++     ++ V +AL+ +Y     +     VF  M   + V
Sbjct: 282 TACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVV 341

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           SW +++  +  +     EAVK + DM+  G  P+  T  +++++ ++ +  + G Q H +
Sbjct: 342 SWTAMLVGYGQN-GYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCR 400

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
            +   + +  T+ NAL++ YGKCG ++D  ++F+ MS   DEVSW +++SGY       +
Sbjct: 401 ALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMS-YVDEVSWTALVSGYAQFGKANE 459

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI----GS 600
            + L   M+  G + D  TF  VLSAC+    +++G ++    ++   E  ++      +
Sbjct: 460 TLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIK---EHRIIPIEDHYT 516

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARH 640
            ++D++S+ GR++ A +F + MP   +   W S++S    H
Sbjct: 517 CMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFH 557



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 141/541 (26%), Positives = 227/541 (41%), Gaps = 123/541 (22%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRN----------- 50
           +D K  H  I+K     ++FL N L++ Y +   +  A ++FD+MP RN           
Sbjct: 26  RDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSY 85

Query: 51  --------------------SVSWACIVSGYTHKGMSNEACKMFKEMVRAG-FLLNRYAL 89
                                VSW  ++S Y  +G   ++ K +  M+  G F LNR AL
Sbjct: 86  SKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIAL 145

Query: 90  GS--VLRACQECGPSGF-------KFGMQVHC--------------LVLKSNQTFDGL-- 124
            +  +L + Q C   G        KFG Q +               LV  + Q FD +  
Sbjct: 146 STMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPE 205

Query: 125 ----VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
               + N LIA    C    D +R++F +++ +D ISW ++I+ ++Q G       LF  
Sbjct: 206 KNVVMYNTLIAGLMRCSRIED-SRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFRE 264

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ---QILAMVKKAGLLSDLYVGSAL 237
           M+ E    +L+ ++YTFGS++TA       G   LQ   Q+ A + +     +++VGSAL
Sbjct: 265 MRLE----NLEMDQYTFGSVLTAC-----GGVMALQEGKQVHAYIIRTDYQDNIFVGSAL 315

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------- 272
           V  + +  +   A  +F +M  KNVVS   ++ G                          
Sbjct: 316 VDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDD 375

Query: 273 ----------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                            +G + H   + SGL   + V N LV +Y KCG+I+DS  +F  
Sbjct: 376 FTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSE 435

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M   D VSW  ++SG  Q G   E +  F +M   G      + I  LS+C+  G +  G
Sbjct: 436 MSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKG 495

Query: 377 QQIHGEGLK----LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIG 431
            QI    +K    + ++   +    ++ L++ AG L    K    MP   D + W S++ 
Sbjct: 496 NQIFESMIKEHRIIPIEDHYT---CMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLS 552

Query: 432 A 432
           +
Sbjct: 553 S 553


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 270/694 (38%), Positives = 403/694 (58%), Gaps = 39/694 (5%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYA--KCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           K++H  +I++GL +     + L+   A    G +  +  +F  +   +   WNTMI G  
Sbjct: 49  KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNS 108

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            +     AI  +  M   G+  ++++    L SCA +G    G+QIHG  LKLGL+SD  
Sbjct: 109 LSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPF 168

Query: 394 VSNALLSLYADAGYLSR---------------------------CL----KVFFLMPEHD 422
           V  +L+++YA  G L                             CL    ++F  +P  D
Sbjct: 169 VHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRD 228

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
            VSWN++I  +A S     EA+ ++ +M+RA  +PN  T + +L+A +     +LG+ V 
Sbjct: 229 AVSWNAMIAGYAQS-GRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVR 287

Query: 483 AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
           + +  + + +   + NAL+  Y KCG++D    +F  + E+ D +SWN MI GY H    
Sbjct: 288 SWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEK-DIISWNVMIGGYSHMNSY 346

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF-DVVIGSA 601
            +A+ L   M Q     +  TF ++L ACA +  L+ G  +HA   +  L   +  + ++
Sbjct: 347 KEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTS 406

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+DMY+KCG I+ A + F  M  +++ SWN+MISG A HGH + AL LF QM+ +G  PD
Sbjct: 407 LIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPD 466

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            +TFVGVLSACSHAGLV+ G + F SM + Y + P+L+ + CM+DLLGRAG  D+ E  +
Sbjct: 467 DITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALM 526

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
             M + P+  IW ++LGA CR +    ELG  AA  LFE+EP+N   YVLL+N+YA+ G+
Sbjct: 527 KNMEMKPDGAIWGSLLGA-CRVH-GNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGR 584

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           W+DVA+ R  + +  +KK  GCS + +   VH F+ GD+ H +   IY+ L E++Q +  
Sbjct: 585 WDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEK 644

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSA 900
           AG+VP T   L+D++ E KE  +S+HSEK+A+AF +++   +  IRI+KNLRVCG+CHSA
Sbjct: 645 AGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSA 704

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            K ISKI  REI+ RD NRFHHF DG CSC DYW
Sbjct: 705 IKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 135/513 (26%), Positives = 216/513 (42%), Gaps = 96/513 (18%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLIN--VYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           ++ K  H QI+K G     F  + LI        G+L+ A  LF+ +   N   W  ++ 
Sbjct: 46  QNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIR 105

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           G +       A   +  M+  G   N Y    +L++C + G +  + G Q+H  VLK   
Sbjct: 106 GNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGAT--QEGKQIHGHVLKLGL 163

Query: 120 TFDGLVSNVLIAMYGSCLE------------------------------STDCARRIFEE 149
             D  V   LI MY    E                                D ARR+FEE
Sbjct: 164 ESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEE 223

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
           I  RD +SWN++I+ Y+Q G        F  M+R     ++ PNE T   ++T   +   
Sbjct: 224 IPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRA----NVAPNEST---MVTVLSACAQ 276

Query: 210 SGSYLLQQ-ILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
           SGS  L   + + ++  GL S+L + +AL+  +++ G+   AR +FE + +K+++S N +
Sbjct: 277 SGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVM 336

Query: 269 MEGR-------------RK----------------------------GKEVHGYLIRSGL 287
           + G              RK                            GK +H Y+ +  L
Sbjct: 337 IGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFL 396

Query: 288 -FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
                ++   L++MYAKCG I+ ++ VF  M  K   SWN MISGL  +G    A+  F 
Sbjct: 397 GLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFR 456

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS----NALLSLY 402
            MR +G    + + +  LS+C+  G + LG+Q     ++   D D+S        ++ L 
Sbjct: 457 QMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVE---DYDISPKLQHYGCMIDLL 513

Query: 403 ADAGYLSRC---LKVFFLMPEHDQVSWNSVIGA 432
             AG        +K   + P  D   W S++GA
Sbjct: 514 GRAGLFDEAEALMKNMEMKP--DGAIWGSLLGA 544



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 195/429 (45%), Gaps = 73/429 (17%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLA----------------------- 37
           +++ K  H  +LK G   D F+  +LIN+Y + G+L                        
Sbjct: 148 TQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITG 207

Query: 38  --------SASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYAL 89
                    A +LF+E+P R++VSW  +++GY   G   EA   F+EM RA    N   +
Sbjct: 208 YTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTM 267

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
            +VL AC + G    + G  V   +       +  + N LI MY  C +  D AR +FE 
Sbjct: 268 VTVLSACAQSG--SLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGD-LDKARDLFEG 324

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSV 208
           I  +D+ISWN +I  YS          LF +MQ+     +++PN+ TF S++ A AY   
Sbjct: 325 ICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQS----NVEPNDVTFVSILPACAYLGA 380

Query: 209 LSGSYLLQQILAMVKKAGL-LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
           L    L + I A + K  L L++  + ++L+  +A+ GN   A+++F  M  K++ S N 
Sbjct: 381 LD---LGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNA 437

Query: 268 LMEGRRKGKEVHGYL---------IRSGLF---DMVAVGNGLVNMYAKCGTIDDSRSVFR 315
           ++ G      +HG+          +R   F   D+  V  G+++  +  G ++  R  F 
Sbjct: 438 MISGL----AMHGHANMALELFRQMRDEGFEPDDITFV--GVLSACSHAGLVELGRQCFS 491

Query: 316 FMIGKDSVS-----WNTMISGLDQNGCYE--EAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
            M+    +S     +  MI  L + G ++  EA+M    M+ DG +       S L +C 
Sbjct: 492 SMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWG-----SLLGACR 546

Query: 369 SLGWIMLGQ 377
             G + LG+
Sbjct: 547 VHGNVELGE 555



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 143/309 (46%), Gaps = 21/309 (6%)

Query: 11  ILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEA 70
           I  HG   ++ L N LI++Y + GDL  A  LF+ + +++ +SW  ++ GY+H     EA
Sbjct: 290 IEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEA 349

Query: 71  CKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS---- 126
             +F++M ++    N     S+L AC   G      G  +H  +   ++ F GL +    
Sbjct: 350 LALFRKMQQSNVEPNDVTFVSILPACAYLG--ALDLGKWIHAYI---DKKFLGLTNTSLW 404

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
             LI MY  C  + + A+++F  ++ + L SWN++IS  +  G      +LF +M+ EGF
Sbjct: 405 TSLIDMYAKC-GNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGF 463

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
               +P++ TF  +++A   + L      Q   +MV+   +   L     ++    R G 
Sbjct: 464 ----EPDDITFVGVLSACSHAGLV-ELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGL 518

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LVNM 300
           F  A  + + M  K   ++ G + G  R  G    G      LF++     G    L N+
Sbjct: 519 FDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNI 578

Query: 301 YAKCGTIDD 309
           YA  G  DD
Sbjct: 579 YATAGRWDD 587


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 273/707 (38%), Positives = 396/707 (56%), Gaps = 53/707 (7%)

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK---DSVSWNTMISGLDQN 335
           H  + RSG    V V N +V+MY KCG +  + ++F  +  +   D VSWN+++S     
Sbjct: 282 HATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWA 341

Query: 336 GCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
                A+  F  M    LMS +  SL++ L +CASL   + G+Q+HG  ++ GL  DV V
Sbjct: 342 SDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFV 401

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS------------------ 436
            NA++ +YA  G +    KVF  M   D VSWN+++  ++ +                  
Sbjct: 402 GNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENI 461

Query: 437 -------EALVS---------EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
                   A+++         EA+  +  M   G  PN VT +++L+A  S      G +
Sbjct: 462 ELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKE 521

Query: 481 VHAQVIKYNV--------ANETTIENALLSCYGKCGEMDDCEKIFARMSER-RDEVSWNS 531
            H   IK+ +        A++  + N L+  Y KC   +   K+F  +S + RD V+W  
Sbjct: 522 THCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTV 581

Query: 532 MISGYIHNELLPKAMNLV--WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
           MI GY  +     A+ L    F M +  + + FT +  L ACA +A L  G +VHA  +R
Sbjct: 582 MIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLR 641

Query: 590 ACL-EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
                  + + + L+DMYSK G +D A   FD MP RN  SW S+++GY  HG G+ AL 
Sbjct: 642 NFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALR 701

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           +F +M+    +PD +TF+ VL ACSH+G+VD G   F  MS+ +G+ P  E ++CMVDL 
Sbjct: 702 VFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLW 761

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
           GRAG L +  + IN+MP+ P  ++W  +L AC   +    ELG  AAN L E+E  N  +
Sbjct: 762 GRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHS--NVELGEFAANRLLELESGNDGS 819

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
           Y LL+N+YA+  +W+DVA+ R  MK   +KK  GCSW+  + GV  F  GD SHP+   I
Sbjct: 820 YTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQI 879

Query: 829 YEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRI 887
           YE L +L Q+++  GYVPQT FAL D++ E K DL+  HSEK+A+A+ +LT + + PIRI
Sbjct: 880 YETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIRI 939

Query: 888 MKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            KNLR+CGDCHSA  +ISKI+  EI+LRDS+RFHHF +G CSC  YW
Sbjct: 940 TKNLRICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 174/664 (26%), Positives = 303/664 (45%), Gaps = 71/664 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVS--WACIVSGY 61
           AKL H Q +  G  +   L   LI  Y+     A A  L + +P   S    W  ++   
Sbjct: 177 AKLLHQQSIMQGLLFH--LATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRA 234

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
            H G   +   ++++M   G+  + Y    V +AC     S    G  +H  V +S    
Sbjct: 235 LHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKAC--ANLSSLSLGASLHATVSRSGFAS 292

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETR---DLISWNSIISVYSQRGDTISVFKLF 178
           +  V N +++MYG C  +   A  +F+++  R   DL+SWNS++S Y    D  +   LF
Sbjct: 293 NVFVCNAVVSMYGKC-GALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALF 351

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
            +M     R+ + P+  +  +++ A  S  L+ S   +Q+     ++GL+ D++VG+A+V
Sbjct: 352 HKMTT---RHLMSPDVISLVNILPACAS--LAASLRGRQVHGFSIRSGLVDDVFVGNAVV 406

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLV 298
             +A+ G    A K+F++M  K+VVS N ++ G                           
Sbjct: 407 DMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTG--------------------------- 439

Query: 299 NMYAKCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
             Y++ G ++ + S+F  M    I  D V+W  +I+G  Q G   EA+  F  M   G  
Sbjct: 440 --YSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSR 497

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLK--LGLD------SDVSVSNALLSLYADAG 406
            +  +L+S LS+C S+G ++ G++ H   +K  L LD       D+ V N L+ +YA   
Sbjct: 498 PNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQ 557

Query: 407 YLSRCLKVFFLMPEHDQ--VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS--PNGVTF 462
                 K+F  +   D+  V+W  +IG +A      + A++ +  M +   S  PN  T 
Sbjct: 558 STEVARKMFDSVSPKDRDVVTWTVMIGGYA-QHGDANNALQLFSGMFKMDKSIKPNDFTL 616

Query: 463 INILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
              L A +  +  + G QVHA V++ +  +    + N L+  Y K G++D  + +F  M 
Sbjct: 617 SCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMP 676

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
           + R+ VSW S+++GY  +     A+ +   M +     D  TF  VL AC+    ++ G+
Sbjct: 677 Q-RNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGI 735

Query: 582 EVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVRNV-YSWNSMISG 636
                  R   +F V  G    + +VD++ + GR+  A +  + MP+      W +++S 
Sbjct: 736 NFFN---RMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSA 792

Query: 637 YARH 640
              H
Sbjct: 793 CRLH 796


>gi|302755875|ref|XP_002961361.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
 gi|300170020|gb|EFJ36621.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
          Length = 1121

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 312/991 (31%), Positives = 491/991 (49%), Gaps = 72/991 (7%)

Query: 5    KLFHLQILKHGFAYD-------VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACI 57
            K  H QI + G   D        FL N L+ +Y + G    A + FD +  +N  SW  I
Sbjct: 142  KRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFSWTSI 201

Query: 58   VSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
            +  Y H G+  +A + F +M++AG   +R    + L  C        + G  +H  +   
Sbjct: 202  LVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGIL--KRLEDGAGIHRQIQDK 259

Query: 118  NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
                D  + N L++MYG C    D A+ +F+ +E R++ISW  ++SV+++ G     + L
Sbjct: 260  PLDSDLEIGNALVSMYGKC-GRLDLAKELFDCLERRNVISWTILVSVFAENGRRRETWGL 318

Query: 178  FSRMQREGFRYSLKPNEYTFGSLITAAYS-SVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
               M  EG    +KP++    +L+    S  VL     +      +   GL  +  V +A
Sbjct: 319  LRSMAVEG----IKPDKVLLLTLLNVCSSRGVLDEDSWMAH--DYIVGGGLDREAVVATA 372

Query: 237  LVSGFARLGNFYYARKIFE--------------------------------------QMI 258
            L+S FAR G    AR+IFE                                      Q +
Sbjct: 373  LLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGV 432

Query: 259  QKNVV---SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
            + N +   S  G     + G+ +H  +  SG    V+V N LV MY KCG++ DS  +F 
Sbjct: 433  KPNCITFISSLGACSSLQDGRALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSAKLFS 492

Query: 316  FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
             M  KD  SWN+ I+    +G  +E I     MR +G +    + ++ L+SC     +  
Sbjct: 493  EMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPASLQD 552

Query: 376  GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
            G  +H + ++ G ++D  V++A++++Y   G L R  ++F  +   D + W  ++  +  
Sbjct: 553  GVLMHEKIVQCGYEADTVVASAVINMYGRCGGLDRAREIFTRVKTFDVILWTGMLTVYCQ 612

Query: 436  SEALVSEAVKYYLDMRRAGWSPNGVTFINILA--AASSFSMGKLGHQVHAQVIKYNVANE 493
                  + ++++  M   G  P GVT +N++   A S     + G  + +   +  + +E
Sbjct: 613  L-GRTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSGLEHFRDGVWISSLAWESGLESE 671

Query: 494  TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA-MNLVWFM 552
            T + N+L+  + +   +     IF R  E+   +   +M++ Y+  E   +A + L   M
Sbjct: 672  TMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALH-TTMLAAYVKGERGKEAALTLFARM 730

Query: 553  MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRI 612
            +  G      T  T +SAC  +A       VH       LE +  + + LVDMY K G +
Sbjct: 731  LLEGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDV 790

Query: 613  DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
            D A   FD    RNV +WN+M   Y + G     L L   M+ DG  PD VTFV +LS C
Sbjct: 791  DTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVC 850

Query: 673  SHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPIT--PNS 730
             H+GL++E   +F +M + +G+ P  + +SC++DLL RAGEL + E+FI ++ ++   +S
Sbjct: 851  GHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASS 910

Query: 731  LIWRTVLGACCRANCRKTELGRKAANML--FEMEPQN----AVNYVLLANMYASGGKWED 784
             +W  +LGAC       +   R A N +   +MEP++    +  +V LAN+ A+ G W++
Sbjct: 911  PMWMALLGACRSLGNSSSRARRAARNAMDVEKMEPRSQHDPSAAHVALANICAASGNWDE 970

Query: 785  VAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGY 844
                RKAM E  ++KE G S + +K+ +H FVAGD  HP ++ IY +L+ L + M D GY
Sbjct: 971  ALSIRKAMAEKGLRKEPGRSLIAVKNRLHEFVAGDRDHPRREEIYAELRRLERAMVDRGY 1030

Query: 845  VPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKF 903
            V  T     ++    K DL+  HSEK+AVAF VL+      +RI+KNLR CGDCH+A K 
Sbjct: 1031 VVDTGMVTHNVGEADKRDLLGCHSEKLAVAFGVLSTPPGSSLRIIKNLRACGDCHTAIKL 1090

Query: 904  ISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            IS I GREIV+RDSNRFHHF +G CSCGDYW
Sbjct: 1091 ISAIEGREIVVRDSNRFHHFRNGSCSCGDYW 1121



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 210/801 (26%), Positives = 370/801 (46%), Gaps = 86/801 (10%)

Query: 5   KLFHLQILKHGFAYD-------VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACI 57
           K  H QI + G   D        FL N L+ +Y + G    A + FD +  +N  SW  I
Sbjct: 34  KRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFSWTSI 93

Query: 58  VSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
           +  Y H G+  +A + F +M++AG   +R     +L+ C   G      G ++H  + +S
Sbjct: 94  LVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRLGD--LAQGKRLHAQIRES 151

Query: 118 NQTFDG-------LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD 170
               D         + N L+ MYG C   TD A+R F+ I  +++ SW SI+  Y   G 
Sbjct: 152 GLLLDDREESGARFLGNCLVQMYGKC-GRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGL 210

Query: 171 TISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLL 228
                + F +M + G    ++P+   F + +        +  G+ + +QI    +   L 
Sbjct: 211 HAQALERFHQMIKAG----VEPDRLVFLAALNVCGILKRLEDGAGIHRQI----QDKPLD 262

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM-----EGRRKGK------- 276
           SDL +G+ALVS + + G    A+++F+ + ++NV+S   L+      GRR+         
Sbjct: 263 SDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENGRRRETWGLLRSM 322

Query: 277 ------------------------------EVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
                                           H Y++  GL     V   L++M+A+CG 
Sbjct: 323 AVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGLDREAVVATALLSMFARCGR 382

Query: 307 IDDSRSVFRFMIGKDSV---SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           +D +R +F  +    +     WN MI+     GC +EA+    +++  G+  +  + IS+
Sbjct: 383 VDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISS 442

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L +C+SL     G+ +H    + G D +VSV+NAL+++Y   G L    K+F  M E D 
Sbjct: 443 LGACSSL---QDGRALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSAKLFSEMAEKDL 499

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
            SWNS I A +       E +K    MR  G+    VTF+  L + +  +  + G  +H 
Sbjct: 500 ASWNSAIAAHS-YHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPASLQDGVLMHE 558

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
           ++++     +T + +A+++ YG+CG +D   +IF R+ +  D + W  M++ Y       
Sbjct: 559 KIVQCGYEADTVVASAVINMYGRCGGLDRAREIFTRV-KTFDVILWTGMLTVYCQLGRTK 617

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER---GMEVHACGVRACLEFDVVIGS 600
           + M     M+  G +    T   +++ C + + LE    G+ + +    + LE + ++ +
Sbjct: 618 QVMEHFRSMLHEGLKPTGVTLVNLIT-CVADSGLEHFRDGVWISSLAWESGLESETMVAN 676

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG-DKALTLFSQMKLDGPL 659
           +L++M+S+   +  A   FD  P ++V    +M++ Y +   G + ALTLF++M L+G  
Sbjct: 677 SLIEMFSEFRSLSQARAIFDRNPEKSVALHTTMLAAYVKGERGKEAALTLFARMLLEGLE 736

Query: 660 PDHVTFVGVLSACSHAGLVD-EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
           P  VT V  +SAC   GL D    K     ++  GL  +    + +VD+ G+AG++D   
Sbjct: 737 PSSVTLVTAMSAC--GGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVD-TA 793

Query: 719 EFINKMPITPNSLIWRTVLGA 739
            +I    +  N   W  + GA
Sbjct: 794 RYIFDRALRRNVTTWNAMAGA 814



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 173/701 (24%), Positives = 306/701 (43%), Gaps = 78/701 (11%)

Query: 91  SVLRACQECGPSG-FKFGMQVHCLVLKSNQTFDG-------LVSNVLIAMYGSCLESTDC 142
           S  R  +ECG  G    G ++H  + +S    D         + N L+ MYG C   TD 
Sbjct: 16  SYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKC-GRTDE 74

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A+R F+ I  +++ SW SI+  Y   G      + F +M                     
Sbjct: 75  AQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQM--------------------- 113

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
                                KAG+  D  V + L+    RLG+    +++  Q+ +  +
Sbjct: 114 --------------------IKAGVEPDRLVYARLLKECGRLGDLAQGKRLHAQIRESGL 153

Query: 263 VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
           +  +    G R                   +GN LV MY KCG  D+++  F  +  K+ 
Sbjct: 154 LLDDREESGAR------------------FLGNCLVQMYGKCGRTDEAQRAFDSIAHKNI 195

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
            SW +++      G + +A+  F  M + G+       ++ L+ C  L  +  G  IH +
Sbjct: 196 FSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQ 255

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
                LDSD+ + NAL+S+Y   G L    ++F  +   + +SW  ++  FA++     E
Sbjct: 256 IQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAEN-GRRRE 314

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFS-MGKLGHQVHAQVIKYNVANETTIENALL 501
                  M   G  P+ V  + +L   SS   + +     H  ++   +  E  +  ALL
Sbjct: 315 TWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGLDREAVVATALL 374

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEV--SWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           S + +CG +D   +IF ++++   +V   WN+MI+ Y H     +A+ L+  +  +G + 
Sbjct: 375 SMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKP 434

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           +  TF + L AC+S   L+ G  +H     +  + +V + +ALV MY KCG +  +++ F
Sbjct: 435 NCITFISSLGACSS---LQDGRALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSAKLF 491

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
             M  +++ SWNS I+ ++ HG  D+ + L  QM+ +G L + VTF+  L++C+    + 
Sbjct: 492 SEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPASLQ 551

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           +G    + + Q  G        S ++++ GR G LD+  E   ++  T + ++W  +L  
Sbjct: 552 DGVLMHEKIVQC-GYEADTVVASAVINMYGRCGGLDRAREIFTRVK-TFDVILWTGMLTV 609

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
            C+   R  ++     +ML E      V  V L    A  G
Sbjct: 610 YCQLG-RTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSG 649



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 175/749 (23%), Positives = 327/749 (43%), Gaps = 75/749 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +D    H QI       D+ + N L+++Y + G L  A +LFD +  RN +SW  +VS +
Sbjct: 247 EDGAGIHRQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVF 306

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   E   + + M   G   ++  L ++L  C   G       M  H  ++      
Sbjct: 307 AENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWM-AHDYIVGGGLDR 365

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEI---ETRDLISWNSIISVYSQRGDTISVFKLF 178
           + +V+  L++M+  C    D AR IFE++     + +  WN++I+ Y+ RG +     L 
Sbjct: 366 EAVVATALLSMFARC-GRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLL 424

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
             +Q +G    +KPN  TF S +  A SS+  G    + +  ++ ++G   ++ V +ALV
Sbjct: 425 DSLQLQG----VKPNCITFISSL-GACSSLQDG----RALHLLIHESGFDQEVSVANALV 475

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLM-----EGR--------------------- 272
           + + + G+   + K+F +M +K++ S N  +      GR                     
Sbjct: 476 TMYGKCGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKV 535

Query: 273 ---------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                          + G  +H  +++ G      V + ++NMY +CG +D +R +F  +
Sbjct: 536 TFLTALNSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYGRCGGLDRAREIFTRV 595

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML-- 375
              D + W  M++   Q G  ++ + +F +M  +GL  +  +L++ ++  A  G      
Sbjct: 596 KTFDVILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSGLEHFRD 655

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G  I     + GL+S+  V+N+L+ ++++   LS+   +F   PE       +++ A+  
Sbjct: 656 GVWISSLAWESGLESETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALHTTMLAAYVK 715

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
            E     A+  +  M   G  P+ VT +  ++A    +      +VH +  +  + +ET 
Sbjct: 716 GERGKEAALTLFARMLLEGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETC 775

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           + N L+  YGK G++D    IF R + RR+  +WN+M   Y    +    + LV  M + 
Sbjct: 776 VANGLVDMYGKAGDVDTARYIFDR-ALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRD 834

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGR 611
           G R D  TF ++LS C     LE   E     V    EF +       S ++D+ ++ G 
Sbjct: 835 GYRPDSVTFVSLLSVCGHSGLLE---EARYNFVAMRREFGIDPSPKHYSCVIDLLARAGE 891

Query: 612 IDYASRFFDLMPVRNVYS---WNSMISGYARHGHGDKALTLFSQMKLD----GPLPDH-- 662
           +  A  F   + V +  S   W +++      G+        ++  +D     P   H  
Sbjct: 892 LQQAEDFIARISVSSPASSPMWMALLGACRSLGNSSSRARRAARNAMDVEKMEPRSQHDP 951

Query: 663 -VTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
               V + + C+ +G  DE     K+M++
Sbjct: 952 SAAHVALANICAASGNWDEALSIRKAMAE 980



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 192/420 (45%), Gaps = 18/420 (4%)

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL---DSDVS----VSNALL 399
           A+ R G+  +  S    L  C  LG +  G+++H +  + GL   D + S    + N L+
Sbjct: 4   AISRSGVDDACRSYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLV 63

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
            +Y   G      + F  +   +  SW S++ A+  +  L ++A++ +  M +AG  P+ 
Sbjct: 64  QMYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHA-GLHAQALERFHQMIKAGVEPDR 122

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE-------NALLSCYGKCGEMDD 512
           + +  +L           G ++HAQ+ +  +  +   E       N L+  YGKCG  D+
Sbjct: 123 LVYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDE 182

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
            ++ F  ++  ++  SW S++  Y H  L  +A+     M++ G   D   F   L+ C 
Sbjct: 183 AQRAFDSIAH-KNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCG 241

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
            +  LE G  +H       L+ D+ IG+ALV MY KCGR+D A   FD +  RNV SW  
Sbjct: 242 ILKRLEDGAGIHRQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTI 301

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           ++S +A +G   +   L   M ++G  PD V  + +L+ CS  G++DE            
Sbjct: 302 LVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGG 361

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI--WRTVLGACCRANCRKTEL 750
           GL  +    + ++ +  R G +DK  E   K+      +I  W  ++ A     C K  L
Sbjct: 362 GLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEAL 421



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 17/261 (6%)

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFD-------VVIGSALVDMYSKCGRIDYA 615
           ++A +L  C  +  L +G  +HA    + L  D         +G+ LV MY KCGR D A
Sbjct: 16  SYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEA 75

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
            R FD +  +N++SW S++  Y   G   +AL  F QM   G  PD + +  +L  C   
Sbjct: 76  QRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRL 135

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQF------SCMVDLLGRAGELDKIEEFINKMPITPN 729
           G + +G +    + +   L+   E+       +C+V + G+ G  D+ +   + +    N
Sbjct: 136 GDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIA-HKN 194

Query: 730 SLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKAR 789
              W ++L A   A      L R    +   +EP   V ++   N+     + ED A   
Sbjct: 195 IFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLV-FLAALNVCGILKRLEDGAGIH 253

Query: 790 KAMKEAEVKK--EAGCSWVTM 808
           + +++  +    E G + V+M
Sbjct: 254 RQIQDKPLDSDLEIGNALVSM 274


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 278/823 (33%), Positives = 445/823 (54%), Gaps = 87/823 (10%)

Query: 191 KPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
           +P+  TF +++ +  S   V+ G  L ++I    + +    D  VG+AL+S + +  +  
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVVEGRALHERI----RCSRFERDTMVGNALISMYGKCDSLV 59

Query: 249 YARKIFEQM--IQKNVVSMNGLMEGRRK-------------------------------- 274
            AR +FE M   Q+NVVS N ++    +                                
Sbjct: 60  DARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGA 119

Query: 275 ------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
                 G+E+H  +  SGL    ++ N LV MYA+ G++ D++ +F+ +  +D  SWN +
Sbjct: 120 CSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAV 179

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           I    Q+G +  A+  F  M+ D +  ++ + I+ +S  ++   +  G++IH E +  G 
Sbjct: 180 ILAHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           D+D+ V+ AL+++Y   G      +VF  M + D VSWN +IG +  +     EA++ Y 
Sbjct: 239 DTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDF-HEALELYQ 297

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            +   G+     TF++IL A SS      G  VH+ +++  + +E  +  AL++ Y KCG
Sbjct: 298 KLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCG 357

Query: 509 EMDDCEKIFARMSER---------------------------------RDEVSWNSMISG 535
            +++  K+F  M  R                                 RD +SWN+MI+ 
Sbjct: 358 SLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITT 417

Query: 536 YIHNELLPKAMNLVWFMM-QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           Y+ N     AM +   M    G + D  TF  VL ACAS+  L     +HA    + LE 
Sbjct: 418 YVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELES 477

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           +VV+ + L++MY++CG ++ A R F     + V SW +M++ ++++G   +AL LF +M 
Sbjct: 478 NVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMD 537

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
           L+G  PD VT+  +L  C+H G +++G+++F  M++++ L P  + F+ MVDLLGR+G L
Sbjct: 538 LEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRL 597

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
              +E +  MP  P+ + W T L A CR +  K ELG  AA  ++E++P +   Y+ ++N
Sbjct: 598 FDAKELLESMPFEPDPVAWMTFLTA-CRIHG-KLELGEAAAERVYELDPSSTAPYIAMSN 655

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           +YA+ G WE VA  RK M+E  +KK  G S++ +   +H F +G + HP  D I E+L  
Sbjct: 656 IYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTR 715

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF--VLTRNSKLPIRIMKNLR 892
           L+  MR AGYVP TK  L D+    KE ++ YHSEK+A+AF  V +R S  PIR++KNLR
Sbjct: 716 LHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLR 775

Query: 893 VCGDCHSAFKFISKIVGREIVLRDSNRFHHF-NDGKCSCGDYW 934
           VC DCH+A KFI++I GR+I++RD NRFH F +DGKCSCGDYW
Sbjct: 776 VCSDCHTATKFIARIAGRDIIVRDCNRFHRFSSDGKCSCGDYW 818



 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 174/637 (27%), Positives = 305/637 (47%), Gaps = 107/637 (16%)

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           +VL +C  CG      G  +H  +  S    D +V N LI+MYG C    D AR +FE +
Sbjct: 12  TVLCSCSSCGD--VVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVD-ARSVFESM 68

Query: 151 E--TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
           +   R+++SWN++I+ Y+Q G +     L+ RM  +G    L  +  TF S++  A SS+
Sbjct: 69  DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQG----LGTDHVTFVSVL-GACSSL 123

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
             G    ++I   V  +GL S   + +ALV+ +AR G+   A+++F+ +  ++  S N +
Sbjct: 124 AQG----REIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAV 179

Query: 269 M----------------------------------------EGRRKGKEVHGYLIRSGLF 288
           +                                        E   +G+++H  ++ +G  
Sbjct: 180 ILAHSQSGDWSGALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
             + V   L+NMY KCG+  ++R VF  M  +D VSWN MI     NG + EA+  +  +
Sbjct: 240 TDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKL 299

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
             +G   +  + +S L +C+S+  +  G+ +H   L+ GLDS+V+V+ AL+++YA  G L
Sbjct: 300 DMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSL 359

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADS------------------------EALVSE-- 442
               KVF  M   D V+W+++IGA+A +                         A+++   
Sbjct: 360 EEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYV 419

Query: 443 -------AVKYYLDMR-RAGWSPNGVTFINILAAASSFSMGKLGH--QVHAQVIKYNVAN 492
                  A+K + +M   AG  P+ VTFI +L A +  S+G+L     +HAQ+ +  + +
Sbjct: 420 QNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACA--SLGRLSEVKALHAQISESELES 477

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
              + N L++ Y +CG +++ E++FA   E +  VSW +M++ +       +A++L   M
Sbjct: 478 NVVVTNTLINMYARCGSLEEAERLFAAAKE-KTVVSWTAMVAAFSQYGRYAEALDLFQEM 536

Query: 553 MQRGQRLDHFTFATVLSACASVATLERG-------MEVHACGVRACLEFDVVIGSALVDM 605
              G + D  T+ ++L  C    +LE+G        E+HA    A   F     +A+VD+
Sbjct: 537 DLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTA-DHF-----AAMVDL 590

Query: 606 YSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHG 641
             + GR+  A    + MP   +  +W + ++    HG
Sbjct: 591 LGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHG 627



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 168/621 (27%), Positives = 286/621 (46%), Gaps = 98/621 (15%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVSG 60
           + +  H +I    F  D  + N LI++Y +   L  A  +F+ M    RN VSW  +++ 
Sbjct: 25  EGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAA 84

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN-Q 119
           Y   G S EA  ++  M   G   +     SVL AC     S    G ++H  V  S   
Sbjct: 85  YAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC-----SSLAQGREIHNRVFYSGLD 139

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           +F  L +N L+ MY     S   A+R+F+ ++TRD  SWN++I  +SQ GD     ++F 
Sbjct: 140 SFQSL-ANALVTMYAR-FGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFK 197

Query: 180 RMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
            M     +  +KPN  T+ ++I+  +   VL      ++I A +   G  +DL V +AL+
Sbjct: 198 EM-----KCDVKPNSTTYINVISGFSTPEVLPEG---RKIHAEIVANGFDTDLVVATALI 249

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGL---------------------MEGRRK--- 274
           + + + G+ + AR++F++M ++++VS N +                     MEG ++   
Sbjct: 250 NMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKA 309

Query: 275 -----------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                            G+ VH +++  GL   VAV   LVNMYAKCG+++++R VF  M
Sbjct: 310 TFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAM 369

Query: 318 -----------IG-----------------------KDSVSWNTMISGLDQNGCYEEAIM 343
                      IG                       +D++SWN MI+   QNGC   A+ 
Sbjct: 370 KNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMK 429

Query: 344 NFCAMR-RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
            F  M    GL     + I+ L +CASLG +   + +H +  +  L+S+V V+N L+++Y
Sbjct: 430 IFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMY 489

Query: 403 ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
           A  G L    ++F    E   VSW +++ AF+      +EA+  + +M   G  P+ VT+
Sbjct: 490 ARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQY-GRYAEALDLFQEMDLEGVKPDDVTY 548

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIE-NALLSCYGKCGEMDDCEKIFARMS 521
            +IL   +     + G +    + + +    T     A++   G+ G + D +++   M 
Sbjct: 549 TSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMP 608

Query: 522 ERRDEVSWNSMISG-YIHNEL 541
              D V+W + ++   IH +L
Sbjct: 609 FEPDPVAWMTFLTACRIHGKL 629


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 261/653 (39%), Positives = 385/653 (58%), Gaps = 5/653 (0%)

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
           I +G    + VG+ +V  Y K   +  +R VF  M+ +D+V WNTM+SGL +N C++EAI
Sbjct: 133 IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAI 192

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
           + F  M + G+   + ++ + L   A L  + LG  I    +K+G  S   V   L  LY
Sbjct: 193 LIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLY 252

Query: 403 ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
           +  G +     +F  + + D VS+N++I  +  +    S +V+ + ++  +G   N  + 
Sbjct: 253 SKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETES-SVRLFKELLVSGEKVNSSSI 311

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
           + ++     F    L   +H    K  V + +++  AL + Y +  E++    +F   SE
Sbjct: 312 VGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSE 371

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
           +    SWN+MISGY  N L  KA++L   M +   R +  T  ++LSACA +  L  G  
Sbjct: 372 K-SLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKW 430

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
           VH    R   E ++ + +AL+DMY+KCG I  A R F +MP +N  +WN+MISGY  HG+
Sbjct: 431 VHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGY 490

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
           G +AL LF++M      P  VTF+ VL ACSHAGLV EG + F+SM   +G  P  E ++
Sbjct: 491 GHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYA 550

Query: 703 CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
           CMVDLLGRAG LDK  +FI KMP+ P   +W  +LGAC     +   L R A++ LFE++
Sbjct: 551 CMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIH--KDANLARLASDKLFELD 608

Query: 763 PQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESH 822
           PQN   YVLL+N+Y++G  + + A  R  +K  ++ K  GC+ + + + +H+F +GD+SH
Sbjct: 609 PQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSH 668

Query: 823 PEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNS 881
           P+   IY  L++L  KMR+AG+  +T  AL D+E E KE +V  HSEK+A+AF ++T   
Sbjct: 669 PQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEP 728

Query: 882 KLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
              IRI+KNLRVC DCH+A KFISKI  R IV+RD+NRFHHF DG CSCGDYW
Sbjct: 729 GTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 781



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 211/458 (46%), Gaps = 46/458 (10%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           GF  D+F+ + ++  Y +   +A+A K+FD M +R++V W  +VSG       +EA  +F
Sbjct: 136 GFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIF 195

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
            +MV+ G   +   + +VL    E        GM + CL +K        V   L  +Y 
Sbjct: 196 GDMVKGGIGFDSTTVAAVLPGVAEL--QDLALGMGIQCLAMKVGFHSHAYVITGLACLYS 253

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS----- 189
            C E  + AR +F +I   DL+S+N++IS Y+   +T S  +LF  +   G + +     
Sbjct: 254 KCGE-IETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIV 312

Query: 190 -LKPNEYTFGSL----------------ITAAYSSVLSGSYLLQQILAMVKKAGLLSD-- 230
            L P  + FG L                  ++ S+ L+  Y     L  ++ A LL D  
Sbjct: 313 GLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVY---SRLNEIESARLLFDES 369

Query: 231 ----LYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLMEGRRK------GK 276
               L   +A++SG+A+ G    A  +F++M    ++ N V++  ++    +      GK
Sbjct: 370 SEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGK 429

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
            VH  + R      + V   L++MYAKCG+I +++ +F  M  K++V+WN MISG   +G
Sbjct: 430 WVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHG 489

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVS 395
              EA+  F  M    +  +  + +S L +C+  G +  G +I    +   G +      
Sbjct: 490 YGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHY 549

Query: 396 NALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
             ++ L   AG L + L     MP E     W +++GA
Sbjct: 550 ACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGA 587



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 111/469 (23%), Positives = 212/469 (45%), Gaps = 22/469 (4%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           + H  +I +GL + +     L +  +    ID +  +F  +   D   +N +I     N 
Sbjct: 28  QTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNN 87

Query: 337 CYEEAIMNFCAMRRD-GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
               A+  +  +R+   L   NF+    +S  +SLG  +L        +  G  SD+ V 
Sbjct: 88  SPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHA---HSIVAGFGSDLFVG 144

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           +A+++ Y     ++   KVF  M E D V WN+++     +     EA+  + DM + G 
Sbjct: 145 SAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCF-DEAILIFGDMVKGGI 203

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
             +  T   +L   +      LG  +    +K    +   +   L   Y KCGE++    
Sbjct: 204 GFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARL 263

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F ++ +  D VS+N+MISGY  N     ++ L   ++  G++++  +   ++       
Sbjct: 264 LFGQIGQ-PDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFG 322

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            L     +H    ++ +  +  + +AL  +YS+   I+ A   FD    +++ SWN+MIS
Sbjct: 323 HLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMIS 382

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
           GYA++G  +KA++LF +M+     P+ VT   +LSAC+  G +  G         V+ LI
Sbjct: 383 GYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLG-------KWVHDLI 435

Query: 696 PQLEQF-------SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
            + E F       + ++D+  + G + + +   + MP   N++ W  ++
Sbjct: 436 NR-ESFESNIFVSTALIDMYAKCGSITEAQRLFSMMP-EKNAVTWNAMI 482



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 139/275 (50%), Gaps = 23/275 (8%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           +K GF    ++   L  +Y + G++ +A  LF ++   + VS+  ++SGYT    +  + 
Sbjct: 234 MKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSV 293

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQ-----VHCLVLKSNQTFDGLVS 126
           ++FKE++ +G  +N  ++  ++       P  F FG       +H    KS    +  VS
Sbjct: 294 RLFKELLVSGEKVNSSSIVGLI-------PVFFPFGHLHLTRCIHGFCTKSGVVSNSSVS 346

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
             L  +Y S L   + AR +F+E   + L SWN++IS Y+Q G T     LF  MQ+   
Sbjct: 347 TALTTVY-SRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQK--- 402

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              ++PN  T  S+++A   + L    L + +  ++ +    S+++V +AL+  +A+ G+
Sbjct: 403 -CEVRPNPVTVTSILSAC--AQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGS 459

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY 281
              A+++F  M +KN V+ N ++ G      +HGY
Sbjct: 460 ITEAQRLFSMMPEKNAVTWNAMISGYG----LHGY 490



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 51/96 (53%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  I +  F  ++F+   LI++Y + G +  A +LF  MP++N+V+W  ++SGY   
Sbjct: 429 KWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLH 488

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G  +EA  +F EM+ +          SVL AC   G
Sbjct: 489 GYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAG 524



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 7/197 (3%)

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
           +Q HAQ+I   + N+      L         +D    +F+ +    D   +N +I  +  
Sbjct: 27  NQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIP-NPDLFLYNVLIRAFSL 85

Query: 539 NELLPKAMNLVWFMMQRGQRL--DHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
           N     A++L +  +++   L  D+FT+A V+S  +S+             + A    D+
Sbjct: 86  NNSPSSAVSL-YTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAH---SIVAGFGSDL 141

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
            +GSA+V  Y K  R+  A + FD M  R+   WN+M+SG  ++   D+A+ +F  M   
Sbjct: 142 FVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKG 201

Query: 657 GPLPDHVTFVGVLSACS 673
           G   D  T   VL   +
Sbjct: 202 GIGFDSTTVAAVLPGVA 218



 Score = 45.8 bits (107), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 4/119 (3%)

Query: 552 MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR 611
           M+ RG       F T+++    V+TL +  + HA  +   L  D+V  + L    S    
Sbjct: 1   MLYRGIASTRNLFLTLIN---RVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKA 57

Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVL 669
           ID AS  F  +P  +++ +N +I  ++ +     A++L++ ++   PL PD+ T+  V+
Sbjct: 58  IDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVI 116


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 287/814 (35%), Positives = 449/814 (55%), Gaps = 58/814 (7%)

Query: 131 AMYGSCLESTDCARRIFEEI----ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           A++ SC+ + +  +++   +    ++++++    +I++Y   GD          + R  F
Sbjct: 27  ALFNSCV-NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDI--------SLSRSTF 77

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSY-----LLQQILAMVKKAGLLSDLYVGSALVSGF 241
            Y  K N +++ S+I+A    V  G Y      + Q+ +M     L  D Y    ++   
Sbjct: 78  DYIHKKNIFSWNSIISAY---VRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC 134

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
             L +                            GK+VH  + + G  D V V   LV++Y
Sbjct: 135 VSLVD----------------------------GKKVHCCVFKMGFEDDVFVAASLVHLY 166

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
           ++ G +D +  VF  M  KD  SWN MISG  QNG    A+     M+ +G+     ++ 
Sbjct: 167 SRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVA 226

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S L  CA    ++ G  IH   LK GLDSDV VSNAL+++Y+  G L     VF  M   
Sbjct: 227 SILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVR 286

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D VSWNS+I A+  +    S A++++  M+  G  P+ +T +++ +  S  S  ++   +
Sbjct: 287 DLVSWNSIIAAYEQNND-PSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSI 345

Query: 482 HAQVIKYN-VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
              VI+   +  +  I NAL++ Y K G M+    +F ++  R+D +SWN++++GY  N 
Sbjct: 346 LGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLP-RKDTISWNTLVTGYTQNG 404

Query: 541 LLPKAMNLVWFMMQ--RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
           L  +A++  + MM+  R    +  T+ +++ A + V  L++GM++HA  ++  L  DV +
Sbjct: 405 LASEAID-AYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFV 463

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            + L+D+Y KCGR++ A   F  +P      WN++I+    HG G++AL LF  M  +  
Sbjct: 464 ATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERV 523

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
             DH+TFV +LSACSH+GLVDEG K F  M + YG+ P L+ + CMVDLLGRAG L+K  
Sbjct: 524 KADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAY 583

Query: 719 EFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYAS 778
           E +  MPI P++ IW  +L AC        ELG  A++ L E++ +N   YVLL+N+YA+
Sbjct: 584 ELVRNMPIQPDASIWGALLSACKIYG--NAELGTLASDRLLEVDSENVGYYVLLSNIYAN 641

Query: 779 GGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQK 838
             KWE V K R   ++  ++K  G S V +     VF  G+++HP+   IY++LK L+ K
Sbjct: 642 TEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAK 701

Query: 839 MRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDC 897
           M+  GYVP   F   D+E + KE +++ HSE++A+AF +++   + PIRI KNLRVCGDC
Sbjct: 702 MKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDC 761

Query: 898 HSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
           H+A K+IS+I  REIV+RDSNRFHHF DG CSC 
Sbjct: 762 HNATKYISRISEREIVVRDSNRFHHFKDGICSCA 795



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 152/583 (26%), Positives = 271/583 (46%), Gaps = 67/583 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  +L  G + ++ L   LIN+YV  GD++ +   FD +  +N  SW  I+S Y  
Sbjct: 38  TKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVR 97

Query: 64  KGMSNEACKMFKE---MVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
            G  +EA     +   M   G L  + Y    +L+AC          G +VHC V K   
Sbjct: 98  FGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC-----VSLVDGKKVHCCVFKMGF 152

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D  V+  L+ +Y S     D A ++F ++  +D+ SWN++IS + Q G+      + +
Sbjct: 153 EDDVFVAASLVHLY-SRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLN 211

Query: 180 RMQREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           RM+ EG    +K +  T  S++   A    V++G  +   +L    K GL SD++V +AL
Sbjct: 212 RMKGEG----VKMDTITVASILPVCAQSDDVINGVLIHLHVL----KHGLDSDVFVSNAL 263

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-------------------------- 271
           ++ +++ G    A+ +F+QM  +++VS N ++                            
Sbjct: 264 INMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDL 323

Query: 272 ---------------RRKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFR 315
                          +R  + + G++IR    D  V +GN LVNMYAK G ++ + +VF 
Sbjct: 324 LTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFD 383

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR--RDGLMSSNFSLISTLSSCASLGWI 373
            +  KD++SWNT+++G  QNG   EAI  +  M   RD + +   + +S + + + +G +
Sbjct: 384 QLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQG-TWVSIIPAYSHVGAL 442

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
             G +IH + +K  L  DV V+  L+ LY   G L   + +F+ +P    V WN++I + 
Sbjct: 443 QQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASL 502

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVAN 492
                   EA++ + DM       + +TF+++L+A S   +   G +    + K Y +  
Sbjct: 503 G-IHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKP 561

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
                  ++   G+ G ++   ++   M  + D   W +++S 
Sbjct: 562 SLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSA 604



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 229/475 (48%), Gaps = 54/475 (11%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D K  H  + K GF  DVF+  +L+++Y R G L  A K+F +MP ++  SW  ++SG+ 
Sbjct: 139 DGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFC 198

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G +  A  +   M   G  ++   + S+L  C +        G+ +H  VLK     D
Sbjct: 199 QNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQS--DDVINGVLIHLHVLKHGLDSD 256

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             VSN LI MY       D A+ +F+++E RDL+SWNSII+ Y Q  D  +  + F  MQ
Sbjct: 257 VFVSNALINMYSKFGRLQD-AQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQ 315

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMV-KKAGLLSDLYVGSALVSGF 241
             G R    P+  T  SL T+ +S  LS   + + IL  V ++  L  D+ +G+ALV+ +
Sbjct: 316 LGGIR----PDLLTVVSL-TSIFSQ-LSDQRISRSILGFVIRREWLDKDVVIGNALVNMY 369

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------------------------- 272
           A+LG    A  +F+Q+ +K+ +S N L+ G                              
Sbjct: 370 AKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTW 429

Query: 273 -------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                        ++G ++H  LI++ L+  V V   L+++Y KCG ++D+ S+F  +  
Sbjct: 430 VSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPR 489

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
             SV WN +I+ L  +G  EEA+  F  M  + + + + + +S LS+C+  G +  GQ+ 
Sbjct: 490 DTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKC 549

Query: 380 HGEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                K  G+   +     ++ L   AGYL +  ++   MP + D   W +++ A
Sbjct: 550 FDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSA 604



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 18/195 (9%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           F  + ++C +V   ++   +HA  +      ++V+ + L+++Y   G I  +   FD + 
Sbjct: 25  FNALFNSCVNVNATKK---LHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81

Query: 624 VRNVYSWNSMISGYARHGHGDKALT----LFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
            +N++SWNS+IS Y R G   +A+     LFS        PD  TF  +L AC    LVD
Sbjct: 82  KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC--VSLVD 139

Query: 680 EGFKH---FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
               H   FK      G    +   + +V L  R G LD   +    MP+  +   W  +
Sbjct: 140 GKKVHCCVFK-----MGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVK-DVGSWNAM 193

Query: 737 LGACCRANCRKTELG 751
           +   C+       LG
Sbjct: 194 ISGFCQNGNAAGALG 208


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 246/560 (43%), Positives = 363/560 (64%), Gaps = 6/560 (1%)

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G+ +H E LK G   D+   N LL++Y  + +L    K+F  MPE + +S+ ++I  +A+
Sbjct: 57  GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAE 116

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           S   + EA++ ++ + R    PN  TF ++L A ++     LG+Q+H  VIK  + ++  
Sbjct: 117 SVRFL-EAIELFVRLHREVL-PNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVF 174

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           + NAL+  Y KCG M++  ++FA  S  R++V+WN++I G++      KA+ L   M++ 
Sbjct: 175 VSNALMDVYAKCGRMENSMELFAE-SPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEY 233

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
             +    T+++ L ACAS+A LE G+++H+  V+   + D+V+ +AL+DMY+KCG I  A
Sbjct: 234 RVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDA 293

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
              FDLM  ++  SWN+MISGY+ HG G +AL +F +M+     PD +TFVGVLSAC++A
Sbjct: 294 RLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANA 353

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           GL+D+G  +F SM Q +G+ P +E ++CMV LLGR G LDK  + I+++P  P+ ++WR 
Sbjct: 354 GLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRA 413

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           +LGAC   N    ELGR +A  + EMEPQ+   +VLL+NMYA+  +W++VA  RK MK  
Sbjct: 414 LLGACVIHN--DIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRK 471

Query: 796 EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
            VKKE G SW+  +  VH F  GD SHPE  +I   L+ L+ K + AGY+P     L D+
Sbjct: 472 GVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDV 531

Query: 856 EPESKEDLVSYHSEKIAVAFVLTRN-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
           E E KE L+  HSE++A++F + R  S  PIRIMKNLR+C DCH+A K ISK+V REIV+
Sbjct: 532 EDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVV 591

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RD NRFHHF +G CSCGDYW
Sbjct: 592 RDINRFHHFQEGLCSCGDYW 611



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 202/377 (53%), Gaps = 21/377 (5%)

Query: 274 KGKEVHGYLI-RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           +GK +H  ++ R G  D+ A  N L+NMY K   + D+  +F  M  ++++S+ T+I G 
Sbjct: 56  RGKGLHCEILKRGGCLDLFA-WNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGY 114

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            ++  + EAI  F  + R+ ++ + F+  S L +CA++  + LG QIH   +K+GL SDV
Sbjct: 115 AESVRFLEAIELFVRLHRE-VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDV 173

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA---FADSEALVSEAVKYYLD 449
            VSNAL+ +YA  G +   +++F   P  + V+WN+VI       D E    +A++ +L+
Sbjct: 174 FVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGE----KALRLFLN 229

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M         VT+ + L A +S +  + G Q+H+  +K     +  + NAL+  Y KCG 
Sbjct: 230 MLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGS 289

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           + D   +F  M+ ++DEVSWN+MISGY  + L  +A+ +   M +   + D  TF  VLS
Sbjct: 290 IKDARLVFDLMN-KQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLS 348

Query: 570 ACASVATLERGME-----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
           ACA+   L++G       +   G+  C+E      + +V +  + G +D A +  D +P 
Sbjct: 349 ACANAGLLDQGQAYFTSMIQDHGIEPCIEH----YTCMVWLLGRGGHLDKAVKLIDEIPF 404

Query: 625 R-NVYSWNSMISGYARH 640
           + +V  W +++     H
Sbjct: 405 QPSVMVWRALLGACVIH 421



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 173/355 (48%), Gaps = 31/355 (8%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H +ILK G   D+F  N L+N+YV+   L  ASKLFDEMP+RN++S+  ++ GY  
Sbjct: 57  GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAE 116

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                EA ++F  + R   L N++   SVL+AC      G   G Q+HC V+K     D 
Sbjct: 117 SVRFLEAIELFVRLHRE-VLPNQFTFASVLQACATM--EGLNLGNQIHCHVIKIGLHSDV 173

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            VSN L+ +Y  C    + +  +F E   R+ ++WN++I  + Q GD     +LF  M  
Sbjct: 174 FVSNALMDVYAKC-GRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNM-- 230

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
               Y ++  E T+ S + A  S  L+      QI ++  K     D+ V +AL+  +A+
Sbjct: 231 --LEYRVQATEVTYSSALRACAS--LAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAK 286

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGL--FDMVAVGN------ 295
            G+   AR +F+ M +++ VS N ++     G  +HG L R  L  FD +          
Sbjct: 287 CGSIKDARLVFDLMNKQDEVSWNAMI----SGYSMHG-LGREALRIFDKMQETEVKPDKL 341

Query: 296 ---GLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAI 342
              G+++  A  G +D  ++ F  MI    +      +  M+  L + G  ++A+
Sbjct: 342 TFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAV 396



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 217/487 (44%), Gaps = 79/487 (16%)

Query: 61  YTHKGMSNEACKMFKEMV--RAGFLLNRYALGSVLRAC-QECGPSGFKFGMQVHCLVLKS 117
           ++ +G S ++ K+ +E V   +    N +A  + L+ C Q+  PS    G  +HC +LK 
Sbjct: 11  FSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSR---GKGLHCEILKR 67

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
                           G CL                DL +WN ++++Y +        KL
Sbjct: 68  ----------------GGCL----------------DLFAWNILLNMYVKSDFLCDASKL 95

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F  M           N  +F +LI     SV      L+ I                   
Sbjct: 96  FDEMPER--------NTISFVTLIQGYAESV----RFLEAI------------------- 124

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGL 297
              F RL    +   +  Q    +V+     MEG   G ++H ++I+ GL   V V N L
Sbjct: 125 -ELFVRL----HREVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNAL 179

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           +++YAKCG +++S  +F     ++ V+WNT+I G  Q G  E+A+  F  M    + ++ 
Sbjct: 180 MDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATE 239

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
            +  S L +CASL  +  G QIH   +K   D D+ V+NAL+ +YA  G +     VF L
Sbjct: 240 VTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDL 299

Query: 418 MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
           M + D+VSWN++I  ++    L  EA++ +  M+     P+ +TF+ +L+A ++  +   
Sbjct: 300 MNKQDEVSWNAMISGYS-MHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQ 358

Query: 478 GHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           G      +I+ +   E  IE+   ++   G+ G +D   K+   +  +   + W +++  
Sbjct: 359 GQAYFTSMIQ-DHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGA 417

Query: 536 -YIHNEL 541
             IHN++
Sbjct: 418 CVIHNDI 424


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 304/936 (32%), Positives = 496/936 (52%), Gaps = 74/936 (7%)

Query: 58  VSGYTHKGMSNEACKMFKEMV------RAGFLLNRYALGSVLRACQECGPSGFKFGMQVH 111
           +S +   G  +++ +  +E V         FLL R ALG +L+A  +      + G ++H
Sbjct: 50  ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGK--RKDIEMGRKIH 107

Query: 112 CLVLKSNQTF-DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD 170
            LV  S +   D ++   +I MY  C  S D +R +F+ + +++L  WN++IS YS+   
Sbjct: 108 QLVSGSTRLRNDDVLCTRIITMYAMC-GSPDDSRFVFDALRSKNLFQWNAVISSYSRNEL 166

Query: 171 TISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD 230
              V + F  M        L P+ +T+  +I A       G  L   +  +V K GL+ D
Sbjct: 167 YDEVLETFIEMISTT---DLLPDHFTYPCVIKACAGMSDVGIGL--AVHGLVVKTGLVED 221

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME-------------------- 270
           ++VG+ALVS +   G    A ++F+ M ++N+VS N ++                     
Sbjct: 222 VFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMME 281

Query: 271 ---------------------GRRK----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
                                 R +    GK VHG+ ++  L   + + N L++MY+KCG
Sbjct: 282 ENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCG 341

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR-----DGLMSSNFSL 360
            I +++ +F+    K+ VSWNTM+ G    G   +    F  +R+     + + +   ++
Sbjct: 342 CITNAQMIFKMNNNKNVVSWNTMVGGFSAEG---DTHGTFDVLRQMLAGGEDVKADEVTI 398

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           ++ +  C    ++   +++H   LK     +  V+NA ++ YA  G LS   +VF  +  
Sbjct: 399 LNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRS 458

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
               SWN++IG  A S      ++  +L M+ +G  P+  T  ++L+A S     +LG +
Sbjct: 459 KTVNSWNALIGGHAQSND-PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 517

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           VH  +I+  +  +  +  ++LS Y  CGE+   + +F  M E +  VSWN++I+GY+ N 
Sbjct: 518 VHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM-EDKSLVSWNTVITGYLQNG 576

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
              +A+ +   M+  G +L   +   V  AC+ + +L  G E HA  ++  LE D  I  
Sbjct: 577 FPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIAC 636

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           +L+DMY+K G I  +S+ F+ +  ++  SWN+MI GY  HG   +A+ LF +M+  G  P
Sbjct: 637 SLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNP 696

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           D +TF+GVL+AC+H+GL+ EG ++   M   +GL P L+ ++C++D+LGRAG+LDK    
Sbjct: 697 DDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRV 756

Query: 721 I-NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASG 779
           +  +M    +  IW+++L + CR + +  E+G K A  LFE+EP+   NYVLL+N+YA  
Sbjct: 757 VAEEMSEEADVGIWKSLLSS-CRIH-QNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGL 814

Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
           GKWEDV K R+ M E  ++K+AGCSW+ +   V  FV G+      + I      L  K+
Sbjct: 815 GKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKI 874

Query: 840 RDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCH 898
              GY P T     DL  E K + +  HSEK+A+ + L + S+   IR+ KNLR+C DCH
Sbjct: 875 SKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCH 934

Query: 899 SAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +A K ISK++ REIV+RD+ RFHHF +G CSCGDYW
Sbjct: 935 NAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 181/694 (26%), Positives = 312/694 (44%), Gaps = 65/694 (9%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D  LC  +I +Y   G    +  +FD +  +N   W  ++S Y+   + +E  + F EM+
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178

Query: 79  RAGFLL-NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
               LL + +    V++AC   G S    G+ VH LV+K+    D  V N L++ YG+  
Sbjct: 179 STTDLLPDHFTYPCVIKAC--AGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG 236

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
             TD A ++F+ +  R+L+SWNS+I V+S  G +   F L   M  E    +  P+  T 
Sbjct: 237 FVTD-ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATL 295

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            +++         G  L + +     K  L  +L + +AL+  +++ G    A+ IF+  
Sbjct: 296 VTVLPVCAREREIG--LGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 353

Query: 258 IQKNVVSMNGLM-----EGRRKG------------------------------------- 275
             KNVVS N ++     EG   G                                     
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 413

Query: 276 -KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            KE+H Y ++        V N  V  YAKCG++  ++ VF  +  K   SWN +I G  Q
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +     ++     M+  GL+  +F++ S LS+C+ L  + LG+++HG  ++  L+ D+ V
Sbjct: 474 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 533

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             ++LSLY   G L     +F  M +   VSWN+VI  +  +      A+  +  M   G
Sbjct: 534 YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQN-GFPDRALGVFRQMVLYG 592

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
               G++ + +  A S     +LG + HA  +K+ + ++  I  +L+  Y K G +    
Sbjct: 593 IQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSS 652

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           K+F  + E +   SWN+MI GY  + L  +A+ L   M + G   D  TF  VL+AC   
Sbjct: 653 KVFNGLKE-KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHS 711

Query: 575 ATLERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF--DLMPVRNV 627
             +  G+        + G++  L+    +    +DM  + G++D A R    ++    +V
Sbjct: 712 GLIHEGLRYLDQMKSSFGLKPNLKHYACV----IDMLGRAGQLDKALRVVAEEMSEEADV 767

Query: 628 YSWNSMISGYARHGH---GDKALTLFSQMKLDGP 658
             W S++S    H +   G+K      +++ + P
Sbjct: 768 GIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKP 801



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 159/586 (27%), Positives = 278/586 (47%), Gaps = 64/586 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K G   DVF+ N L++ Y   G +  A +LFD MP+RN VSW  ++  ++  G S
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269

Query: 68  NEACKMFKEMVR----AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            E+  +  EM+       F+ +   L +VL  C      G   G  VH   +K     + 
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL--GKGVHGWAVKLRLDKEL 327

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +++N L+ MY  C   T+ A+ IF+    ++++SWN+++  +S  GDT   F +  +M  
Sbjct: 328 VLNNALMDMYSKCGCITN-AQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G    +K +E T  + +   +      S  L+++     K   + +  V +A V+ +A+
Sbjct: 387 GG--EDVKADEVTILNAVPVCFHESFLPS--LKELHCYSLKQEFVYNELVANAFVASYAK 442

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------------- 272
            G+  YA+++F  +  K V S N L+ G                                
Sbjct: 443 CGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSL 502

Query: 273 ----------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                     R GKEVHG++IR+ L   + V   ++++Y  CG +   +++F  M  K  
Sbjct: 503 LSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSL 562

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           VSWNT+I+G  QNG  + A+  F  M   G+     S++    +C+ L  + LG++ H  
Sbjct: 563 VSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAY 622

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            LK  L+ D  ++ +L+ +YA  G +++  KVF  + E    SWN++I  +     L  E
Sbjct: 623 ALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG-IHGLAKE 681

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-----IKYNVANETTIE 497
           A+K + +M+R G +P+ +TF+ +L A +   +   G +   Q+     +K N+ +   + 
Sbjct: 682 AIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVI 741

Query: 498 NALLSCYGKCGEMDDCEKIFA-RMSERRDEVSWNSMISG-YIHNEL 541
           + L    G+ G++D   ++ A  MSE  D   W S++S   IH  L
Sbjct: 742 DML----GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNL 783



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 25/326 (7%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  I+++    D+F+  +++++Y+  G+L +   LFD M D++ VSW  +++GY  
Sbjct: 515 GKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQ 574

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G  + A  +F++MV  G  L   ++  V  AC    PS  + G + H   LK     D 
Sbjct: 575 NGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLL-PS-LRLGREAHAYALKHLLEDDA 632

Query: 124 LVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            ++  LI MY   GS  +S+    ++F  ++ +   SWN++I  Y   G      KLF  
Sbjct: 633 FIACSLIDMYAKNGSITQSS----KVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEE 688

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           MQR G      P++ TF  ++TA   S L   G   L Q   M    GL  +L   + ++
Sbjct: 689 MQRTGH----NPDDLTFLGVLTACNHSGLIHEGLRYLDQ---MKSSFGLKPNLKHYACVI 741

Query: 239 SGFARLGNFYYA-RKIFEQMIQKNVVSM-NGLMEGRRKGKEVH-GYLIRSGLFDMVAVGN 295
               R G    A R + E+M ++  V +   L+   R  + +  G  + + LF++     
Sbjct: 742 DMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKP 801

Query: 296 G----LVNMYAKCGTIDDSRSVFRFM 317
                L N+YA  G  +D R V + M
Sbjct: 802 ENYVLLSNLYAGLGKWEDVRKVRQRM 827



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 15/270 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   LK  F Y+  + N  +  Y + G L+ A ++F  +  +   SW  ++ G+   
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
                +     +M  +G L + + + S+L AC +      + G +VH  ++++    D  
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL--KSLRLGKEVHGFIIRNWLERDLF 532

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V   ++++Y  C E     + +F+ +E + L+SWN++I+ Y Q G       +F +M   
Sbjct: 533 VYLSVLSLYIHCGELC-TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLY 591

Query: 185 GFRY---SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           G +    S+ P    FG+       S+L    L ++  A   K  L  D ++  +L+  +
Sbjct: 592 GIQLCGISMMP---VFGA------CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 642

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           A+ G+   + K+F  + +K+  S N ++ G
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTASWNAMIMG 672


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 288/875 (32%), Positives = 464/875 (53%), Gaps = 54/875 (6%)

Query: 46  MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG-PSGF 104
           MPDR   +W   VSG    G    A ++ + M   G  L+ +AL S++ AC+  G   G 
Sbjct: 1   MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 105 KFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISV 164
             G  +H L  ++    +  +   L+ +YGS    +D ARR+F E+  R+++SW +++  
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSD-ARRLFWEMPERNVVSWTALMVA 119

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
            S  G      + + +M+REG    +  N   F ++++   S  L       Q+ + V  
Sbjct: 120 LSSNGYLEETLRAYRQMRREG----VPCNANAFATVVSLCGS--LENEVPGLQVASHVIV 173

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM--------------- 269
           +GL + + V ++L++ F  LG    A K+F++M + + +S N ++               
Sbjct: 174 SGLQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLV 233

Query: 270 ------EGRRK--------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
                  G R                     G  +H   +RS L   V V N LVNMY+ 
Sbjct: 234 FSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSA 293

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
            G + D+  +F  M  +D +SWNTMIS   QN    +A+     +     + ++ +  S 
Sbjct: 294 AGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSA 353

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L +C+S G ++ G+ +H   L+L L  ++ V N+L+++Y     +    KVF  MP HD 
Sbjct: 354 LGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDV 413

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA-ASSFSMGKLGHQVH 482
           VS+N +IG +A  E   ++A++ +  +R AG  PN +T INI  +  SS  +   G  +H
Sbjct: 414 VSYNVLIGGYAVLED-GTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLH 472

Query: 483 AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
           A +I+    ++  + N+L++ Y KCG ++    IF  ++ + + VSWN++I+        
Sbjct: 473 AYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNK-NIVSWNAIIAANAQLGHG 531

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
            +A+ L   M   G +LD    A  LS+CAS+A+LE GM++H  G+++ L+ D  + +A 
Sbjct: 532 EEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAA 591

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           +DMY KCG+++   +      +R    WN++ISGYA++G+  +A   F QM   G  PD+
Sbjct: 592 MDMYGKCGKMNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDY 651

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFIN 722
           VTFV +LSACSHAGLVD+G  ++ SM+  +G+ P ++   C+VDLLGR G   + E FI 
Sbjct: 652 VTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIE 711

Query: 723 KMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKW 782
           +MP+ PN LIWR++L +      +  E+GRKAA  L E++P +   YVLL+N+YA+  +W
Sbjct: 712 EMPVLPNDLIWRSLLSSS--RTHKNLEIGRKAAKKLLELDPFDDSAYVLLSNLYATNARW 769

Query: 783 EDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDA 842
            DV K R  MK   + K   CSW+ +K+ V  F  GD  H   + IY KL E+  K+R+ 
Sbjct: 770 VDVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREV 829

Query: 843 GYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL 877
           GY+  T  AL D + E KE  +  HSEK+A+A+ L
Sbjct: 830 GYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGL 864



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 185/688 (26%), Positives = 322/688 (46%), Gaps = 75/688 (10%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H    + G   +V++   L+++Y   G ++ A +LF EMP+RN VSW  ++   +  G 
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGY 125

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             E  + +++M R G   N  A  +V+  C          G+QV   V+ S       V+
Sbjct: 126 LEETLRAYRQMRREGVPCNANAFATVVSLCGSL--ENEVPGLQVASHVIVSGLQNQVSVA 183

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI M+G+     D A ++F+ +E  D IS N++IS+YS +G     F +FS M+  G 
Sbjct: 184 NSLITMFGNLGRVQD-AEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGL 242

Query: 187 RYSLKPNEYTFGSLITAA-----------------YSSVLSGSYLLQQILAMVKKAGLLS 229
           R    P+  T  SL++                    SS+ S   ++  ++ M   AG LS
Sbjct: 243 R----PDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLS 298

Query: 230 ------------DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV-------------- 263
                       DL   + ++S + +  N   A K   Q+   N +              
Sbjct: 299 DAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACS 358

Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
           S   L++    GK VH  +++  L   + VGN L+ MY KC +++D+  VF+ M   D V
Sbjct: 359 SPGALID----GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVV 414

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM-LGQQIHGE 382
           S+N +I G        +A+  F  +R  G+  +  ++I+   S  S   +   G+ +H  
Sbjct: 415 SYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAY 474

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            ++ G  SD  V+N+L+++YA  G L     +F  +   + VSWN++I A A       E
Sbjct: 475 IIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQL-GHGEE 533

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           A+K ++DM+ AG   + V     L++ +S +  + G Q+H   +K  + +++ + NA + 
Sbjct: 534 ALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMD 593

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            YGKCG+M++  ++    + R  +  WN++ISGY       +A      M+  G++ D+ 
Sbjct: 594 MYGKCGKMNEMLQMVPDQAIRPQQC-WNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYV 652

Query: 563 TFATVLSACASVATLERGMEVH---------ACGVRACLEFDVVIGSALVDMYSKCGRID 613
           TF  +LSAC+    +++G++ +         + G++ C+         +VD+  + GR  
Sbjct: 653 TFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCV--------CIVDLLGRLGRFA 704

Query: 614 YASRFFDLMPV-RNVYSWNSMISGYARH 640
            A RF + MPV  N   W S++S    H
Sbjct: 705 EAERFIEEMPVLPNDLIWRSLLSSSRTH 732



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 131/569 (23%), Positives = 240/569 (42%), Gaps = 90/569 (15%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   L+      V + N L+N+Y   G L+ A  LF  M  R+ +SW  ++S Y     
Sbjct: 268 IHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCN 327

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           S +A K   ++     + N     S L AC    P     G  VH +VL+ +   + LV 
Sbjct: 328 STDALKTLGQLFHTNEIPNHLTFSSALGACSS--PGALIDGKMVHAIVLQLSLQRNLLVG 385

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI MYG C  S + A ++F+ + T D++S+N +I  Y+   D     ++FS ++  G 
Sbjct: 386 NSLITMYGKC-NSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAG- 443

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              +KPN  T  + I  +++S        + + A + + G LSD YV ++L++ +A+ GN
Sbjct: 444 ---IKPNYITMIN-IHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGN 499

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGR---------------------------------- 272
              +  IF  +  KN+VS N ++                                     
Sbjct: 500 LESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSS 559

Query: 273 -------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                   +G ++HG  ++SGL     V N  ++MY KCG +++   +      +    W
Sbjct: 560 CASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMVPDQAIRPQQCW 619

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           NT+ISG  + G ++EA   F  M   G      + ++ LS+C+  G +            
Sbjct: 620 NTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSHAGLV------------ 667

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
              D  +   N++ S +  +  +  C+ +  L+           +G FA++E  + E   
Sbjct: 668 ---DKGIDYYNSMASSFGVSPGIKHCVCIVDLLGR---------LGRFAEAERFIEEMPV 715

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS-CY 504
                      PN + + ++L+++ +    ++G +   ++++ +  +++     LLS  Y
Sbjct: 716 L----------PNDLIWRSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAY--VLLSNLY 763

Query: 505 GKCGEMDDCEKIFARMS----ERRDEVSW 529
                  D +K+ + M      +R   SW
Sbjct: 764 ATNARWVDVDKLRSHMKTININKRPACSW 792



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 126/283 (44%), Gaps = 31/283 (10%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D K+ H  +L+     ++ + N+LI +Y +   +  A K+F  MP  + VS+  ++ GY 
Sbjct: 365 DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYA 424

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                 +A ++F  +  AG   N   + ++             +G  +H  ++++    D
Sbjct: 425 VLEDGTKAMQVFSWIRSAGIKPNYITMINI-HGSFTSSNDLHNYGRPLHAYIIRTGFLSD 483

Query: 123 GLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
             V+N LI MY  C  LES+     IF  I  ++++SWN+II+  +Q G      KLF  
Sbjct: 484 EYVANSLITMYAKCGNLESST---NIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFID 540

Query: 181 MQREGF---RYSLKPNEYTFGSLIT----------AAYSSVLSGSYLLQQILAMVKKAGL 227
           MQ  G    R  L     +  SL +             S + S SY++   + M  K G 
Sbjct: 541 MQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGK 600

Query: 228 LSDLY------------VGSALVSGFARLGNFYYARKIFEQMI 258
           ++++               + L+SG+A+ G F  A + F+QM+
Sbjct: 601 MNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMV 643


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 317/960 (33%), Positives = 493/960 (51%), Gaps = 67/960 (6%)

Query: 17   AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKE 76
            ++ + L N ++++ VR G++  A ++F +MP+R+  SW  +V GY   G   EA  ++  
Sbjct: 128  SFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYR 187

Query: 77   MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
            M+ AG   + Y    VLR C   G   ++ G +VH  VL+     +  V N L+ MY  C
Sbjct: 188  MLWAGMRPDVYTFPCVLRTCG--GIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKC 245

Query: 137  LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
             +    AR++F+ +   D ISWN++I+ + +  +  +  +LF  M        ++PN  T
Sbjct: 246  GDIV-AARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTM----LENEVQPNLMT 300

Query: 197  FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
              S+  A  S +LS     +++     K G   D+   ++L+  +  LG    A KIF +
Sbjct: 301  ITSVTVA--SGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSR 358

Query: 257  MIQKNVVSMNGLMEGRRK-----------------------------------------G 275
            M  K+ +S   ++ G  K                                         G
Sbjct: 359  METKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVG 418

Query: 276  KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
             ++H      G    V V N L+ MYAK   ID +  VF+FM  KD VSW++MI+G   N
Sbjct: 419  IKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFN 478

Query: 336  GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
                +A+  F  M    +  ++ + I+ LS+CA+ G +  G++IH   L+ G+ S+  V 
Sbjct: 479  HRSFDALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVP 537

Query: 396  NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
            NALL LY   G  S     F +  E D VSWN ++  F  +  L   A+  +  M     
Sbjct: 538  NALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFV-AHGLGDIALSLFNQMMYTSL 596

Query: 456  SPNGVTFINILAAASSFSMGKL--GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
               G       A A+   +G+L  G ++H             + NALL  Y K   +D  
Sbjct: 597  GRMGAC----SALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKA 652

Query: 514  EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
             ++F  M+E+ D VSW+SMI+G+  N     A+    +M+    + +  TF   LSACA+
Sbjct: 653  IEVFKFMAEK-DVVSWSSMIAGFCFNHRSFDALYYFRYMLGH-VKPNSVTFIAALSACAA 710

Query: 574  VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
               L  G E+HA  +R  +  +  + +AL+D+Y KCG+  YA   F +   ++V SWN M
Sbjct: 711  TGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIM 770

Query: 634  ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
            +SG+  HG GD AL+LF+QM   G  PD VTFV ++ ACS AG+V +G++ F   ++ + 
Sbjct: 771  LSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFS 829

Query: 694  LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
            ++P L+ ++CMVDLL R G+L +    IN+MPI P++ +W  +L   CR + R  ELG  
Sbjct: 830  IVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNG-CRIH-RHVELGEL 887

Query: 754  AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
            AA ++ E+EP +   +VLL ++Y   GKW  VA+ RK M+E  ++++ GCSWV +K   H
Sbjct: 888  AAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTH 947

Query: 814  VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
             F+  DESHP+   I   L  + ++M+  G+ P    +L D E  S++D++  HSE++AV
Sbjct: 948  AFLTDDESHPQIKEINVVLHGIYERMKACGFAPVE--SLEDKE-VSEDDILCGHSERLAV 1004

Query: 874  AFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
            AF L   +    I + KN   C  CH  FK IS+IV REI +RD+ + H F DG CSCGD
Sbjct: 1005 AFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRREITVRDTKQLHCFKDGDCSCGD 1064



 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 185/681 (27%), Positives = 323/681 (47%), Gaps = 65/681 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +L+ GF  +V + N L+ +Y + GD+ +A K+FD M   + +SW  +++G+      
Sbjct: 220 HAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHEC 279

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
               ++F  M+      N   + SV  A       G  F  ++H   +K     D    N
Sbjct: 280 EAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVG--FAKEMHGFAVKRGFAIDVAFCN 337

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI MY S     D A +IF  +ET+D +SW ++IS Y + G      ++++ M+     
Sbjct: 338 SLIQMYTSLGRMGD-AGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALME----L 392

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQ-QILAMVKKAGLLSDLYVGSALVSGFARLGN 246
           +++ P++ T   + +A  +    G   +  ++  + +  G +  + V +AL+  +A+  +
Sbjct: 393 HNVNPDDVT---IASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKH 449

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG----------------------------------- 271
              A ++F+ M +K+VVS + ++ G                                   
Sbjct: 450 IDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGHVKPNSVTFIAALSAC 509

Query: 272 -----RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                 R GKE+H Y++R G+     V N L+++Y KCG    + + F     KD VSWN
Sbjct: 510 AATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWN 569

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            M+SG   +G  + A+  F  M    L        S L++CA LG + +G ++H      
Sbjct: 570 IMLSGFVAHGLGDIALSLFNQMMYTSL--GRMGACSALAACACLGRLDVGIKLHELAQNK 627

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
           G    V V+NALL +YA + ++ + ++VF  M E D VSW+S+I  F  +    S    Y
Sbjct: 628 GFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHR--SFDALY 685

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
           Y         PN VTFI  L+A ++    + G ++HA V++  + +E  + NALL  Y K
Sbjct: 686 YFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVK 745

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
           CG+       F+  SE +D VSWN M+SG++ + L   A++L   M++ G+  D  TF  
Sbjct: 746 CGQTSYAWAQFSVHSE-KDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTF-V 803

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLM 622
           ++ AC+    + +G E+     R   +F +V      + +VD+ S+ G++  A    + M
Sbjct: 804 LMCACSRAGMVIQGWELFH---RRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRM 860

Query: 623 PVR-NVYSWNSMISGYARHGH 642
           P++ +   W ++++G   H H
Sbjct: 861 PIKPDAAVWGALLNGCRIHRH 881



 Score =  226 bits (577), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 182/637 (28%), Positives = 302/637 (47%), Gaps = 69/637 (10%)

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
           R A+ + +RAC         FG+++   +L             ++  +G        A R
Sbjct: 109 RRAVDAGMRACARADAEHPSFGLRLGNAMLS------------MLVRFGEIWH----AWR 152

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           +F ++  RD+ SWN ++  Y + G       L+ RM   G R    P+ YTF  ++    
Sbjct: 153 VFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR----PDVYTFPCVLRTCG 208

Query: 206 SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
              +    + +++ A V + G   ++ V +ALV+ +A+ G+   ARK+F+ M   + +S 
Sbjct: 209 G--IPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISW 266

Query: 266 NGLMEGRRK-----------------------------------------GKEVHGYLIR 284
           N ++ G  +                                          KE+HG+ ++
Sbjct: 267 NAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVK 326

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
            G    VA  N L+ MY   G + D+  +F  M  KD++SW  MISG ++NG  ++A+  
Sbjct: 327 RGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEV 386

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           +  M    +   + ++ S L++CA LG + +G ++H      G    V V+NALL +YA 
Sbjct: 387 YALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAK 446

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
           + ++ + ++VF  M E D VSW+S+I  F  +    S    YY         PN VTFI 
Sbjct: 447 SKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHR--SFDALYYFRYMLGHVKPNSVTFIA 504

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
            L+A ++    + G ++HA V++  + +E  + NALL  Y KCG+       F+  SE +
Sbjct: 505 ALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSE-K 563

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
           D VSWN M+SG++ + L   A++L   MM     L      + L+ACA +  L+ G+++H
Sbjct: 564 DVVSWNIMLSGFVAHGLGDIALSLFNQMMY--TSLGRMGACSALAACACLGRLDVGIKLH 621

Query: 585 ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGD 644
                      VV+ +AL++MY+K   ID A   F  M  ++V SW+SMI+G+  +    
Sbjct: 622 ELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSF 681

Query: 645 KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
            AL  F  M L    P+ VTF+  LSAC+  G +  G
Sbjct: 682 DALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSG 717



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 156/574 (27%), Positives = 263/574 (45%), Gaps = 57/574 (9%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H   +K GFA DV  CN+LI +Y  +G +  A K+F  M  ++++SW  ++SGY  
Sbjct: 317 AKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEK 376

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G  ++A +++  M       +   + S L AC   G      G+++H L          
Sbjct: 377 NGFPDKALEVYALMELHNVNPDDVTIASALAACACLGR--LDVGIKLHELAQNKGFIRYV 434

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +V+N L+ MY    +  D A  +F+ +  +D++SW+S+I+ +     +      F  M  
Sbjct: 435 VVANALLEMYAKS-KHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLG 493

Query: 184 EGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
                 +KPN  TF + ++  AA  ++ SG    ++I A V + G+ S+ YV +AL+  +
Sbjct: 494 H-----VKPNSVTFIAALSACAATGALRSG----KEIHAYVLRCGIGSEGYVPNALLDLY 544

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG------------------------------ 271
            + G   YA   F    +K+VVS N ++ G                              
Sbjct: 545 VKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACSA 604

Query: 272 ---------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                       G ++H      G    V V N L+ MYAK   ID +  VF+FM  KD 
Sbjct: 605 LAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDV 664

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           VSW++MI+G   N    +A+  F  M    +  ++ + I+ LS+CA+ G +  G++IH  
Sbjct: 665 VSWSSMIAGFCFNHRSFDALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAY 723

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            L+ G+ S+  V NALL LY   G  S     F +  E D VSWN ++  F  +  L   
Sbjct: 724 VLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFV-AHGLGDI 782

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV-HAQVIKYNVANETTIENALL 501
           A+  +  M   G  P+ VTF+ ++ A S   M   G ++ H +  K+++         ++
Sbjct: 783 ALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMV 841

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
               + G++ +   +  RM  + D   W ++++G
Sbjct: 842 DLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNG 875



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 109/464 (23%), Positives = 201/464 (43%), Gaps = 69/464 (14%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  +L+ G   + ++ N L+++YV+ G  + A   F    +++ VSW  ++SG+
Sbjct: 516 RSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGF 575

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G+ + A  +F +M+     L R  +G+               G+++H L        
Sbjct: 576 VAHGLGDIALSLFNQMMYTS--LGR--MGACSALAACACLGRLDVGIKLHELAQNKGFIR 631

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
             +V+N L+ MY    +  D A  +F+ +  +D++SW+S+I+ +     +      F  M
Sbjct: 632 YVVVANALLEMYAKS-KHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM 690

Query: 182 QREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
                   +KPN  TF + ++  AA  ++ SG    ++I A V + G+ S+ YV +AL+ 
Sbjct: 691 LGH-----VKPNSVTFIAALSACAATGALRSG----KEIHAYVLRCGIGSEGYVPNALLD 741

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDM-VAVGNGLV 298
            + + G   YA   F    +K+VVS N ++ G           +  GL D+ +++ N +V
Sbjct: 742 LYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSG----------FVAHGLGDIALSLFNQMV 791

Query: 299 NM--------------YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
            M               ++ G +     +F     K S+     +  L    C  +    
Sbjct: 792 EMGEHPDEVTFVLMCACSRAGMVIQGWELFHRRTEKFSI-----VPNLKHYACMVD---- 842

Query: 345 FCAMRRDGLMSSNFSLISTL---SSCASLGWIMLGQQIH-----GE-GLKLGLD---SDV 392
              + R G ++  ++LI+ +      A  G ++ G +IH     GE   K+ L+   +DV
Sbjct: 843 --LLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDV 900

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEH-----DQVSWNSVIG 431
           +    L  LY DAG  ++  +V   M E      +  SW  V G
Sbjct: 901 AYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKG 944



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 88/191 (46%), Gaps = 4/191 (2%)

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
           +W +    +  D   +  +   C     ++ GM   A        F + +G+A++ M  +
Sbjct: 84  LWLLESSPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVR 143

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
            G I +A R F  MP R+V+SWN M+ GY + G  ++AL L+ +M   G  PD  TF  V
Sbjct: 144 FGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCV 203

Query: 669 LSACSHAGLVDEGF-KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPIT 727
           L  C   G+ D    +   +    +G   +++  + +V +  + G++    +  + M +T
Sbjct: 204 LRTC--GGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMT 261

Query: 728 PNSLIWRTVLG 738
            + + W  ++ 
Sbjct: 262 -DCISWNAMIA 271


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 300/872 (34%), Positives = 464/872 (53%), Gaps = 60/872 (6%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI-ETRDLISWNSIISVYSQ 167
           ++H LV+          S  LI  Y    E    +  +F  +   +++  WNSII  +S+
Sbjct: 25  RIHALVISLGLDSSDFFSGKLIDKYSHFREPAS-SLSVFRRVSPAKNVYLWNSIIRAFSK 83

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKA 225
            G      + + +++       + P++YTF S+I A         G  + +QIL M    
Sbjct: 84  NGLFPEALEFYGKLRES----KVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDM---- 135

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------- 272
           G  SDL+VG+ALV  ++R+G    AR++F++M  +++VS N L+ G              
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195

Query: 273 ----------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
                                       ++G+ +HG+ ++SG+  +V V NGLV MY K 
Sbjct: 196 HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKF 255

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
               D+R VF  M  +DSVS+NTMI G  +    EE++  F     D       ++ S L
Sbjct: 256 RRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVL 314

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +C  L  + L + I+   LK G   + +V N L+ +YA  G +     VF  M   D V
Sbjct: 315 RACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTV 374

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           SWNS+I  +  S  L+ EA+K +  M       + +T++ +++ ++  +  K G  +H+ 
Sbjct: 375 SWNSIISGYIQSGDLM-EAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSN 433

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
            IK  +  + ++ NAL+  Y KCGE+ D  KIF+ M    D V+WN++IS  +       
Sbjct: 434 GIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVISACVRFGDFAT 492

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
            + +   M +     D  TF   L  CAS+A    G E+H C +R   E ++ IG+AL++
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
           MYSKCG ++ +SR F+ M  R+V +W  MI  Y  +G G+KAL  F+ M+  G +PD V 
Sbjct: 553 MYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVV 612

Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           F+ ++ ACSH+GLVDEG   F+ M   Y + P +E ++C+VDLL R+ ++ K EEFI  M
Sbjct: 613 FIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAM 672

Query: 725 PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
           PI P++ IW +VL AC  +     E   + +  + E+ P +    +L +N YA+  KW+ 
Sbjct: 673 PIKPDASIWASVLRACRTSG--DMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDK 730

Query: 785 VAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGY 844
           V+  RK++K+  + K  G SW+ +   VHVF +GD+S P+ + IY+ L+ L   M   GY
Sbjct: 731 VSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGY 790

Query: 845 VPQTKFALFDL-EPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFK 902
           +P  +    +L E E K  L+  HSE++A+AF +L      P+++MKNLRVCGDCH   K
Sbjct: 791 IPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTK 850

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            ISKIVGREI++RD+NRFH F DG CSC D W
Sbjct: 851 LISKIVGREILVRDANRFHLFKDGTCSCKDRW 882



 Score =  212 bits (539), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 155/509 (30%), Positives = 253/509 (49%), Gaps = 58/509 (11%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           L + QIL  GF  D+F+ N L+++Y R+G L  A ++FDEMP R+ VSW  ++SGY+  G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
              EA +++ E+  +  + + + + SVL A         K G  +H   LKS      +V
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNL--LVVKQGQGLHGFALKSGVNSVVVV 244

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           +N L+AMY      TD ARR+F+E++ RD +S+N++I  Y +    + + +   RM  E 
Sbjct: 245 NNGLVAMYLKFRRPTD-ARRVFDEMDVRDSVSYNTMICGYLK----LEMVEESVRMFLEN 299

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
                KP+  T  S++ A     L    L + I   + KAG + +  V + L+  +A+ G
Sbjct: 300 LD-QFKPDLLTVSSVLRAC--GHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCG 356

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGR--------------------------------- 272
           +   AR +F  M  K+ VS N ++ G                                  
Sbjct: 357 DMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLIS 416

Query: 273 --------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                   + GK +H   I+SG+   ++V N L++MYAKCG + DS  +F  M   D+V+
Sbjct: 417 VSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVT 476

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           WNT+IS   + G +   +     MR+  ++    + + TL  CASL    LG++IH   L
Sbjct: 477 WNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL 536

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI---GAFADSEALVS 441
           + G +S++ + NAL+ +Y+  G L    +VF  M   D V+W  +I   G + + E    
Sbjct: 537 RFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGE---- 592

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAAS 470
           +A++ + DM ++G  P+ V FI I+ A S
Sbjct: 593 KALETFADMEKSGIVPDSVVFIAIIYACS 621



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 203/445 (45%), Gaps = 43/445 (9%)

Query: 26  LINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLN 85
           L+ +Y++      A ++FDEM  R+SVS+  ++ GY    M  E+ +MF E +   F  +
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPD 306

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
              + SVLRAC             ++  +LK+    +  V N+LI +Y  C +    AR 
Sbjct: 307 LLTVSSVLRACGHL--RDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMI-TARD 363

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-----QREGFRY------SLKPNE 194
           +F  +E +D +SWNSIIS Y Q GD +   KLF  M     Q +   Y      S +  +
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423

Query: 195 YTFG-----SLITAAYSSVLSGSYLLQQILAMVKKAG----LLSDLYVG-----SALVSG 240
             FG     + I +     LS S  L  + A   + G    + S +  G     + ++S 
Sbjct: 424 LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISA 483

Query: 241 FARLGNFYYARKIFEQMIQKNVV----------SMNGLMEGRRKGKEVHGYLIRSGLFDM 290
             R G+F    ++  QM +  VV           M   +  +R GKE+H  L+R G    
Sbjct: 484 CVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESE 543

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           + +GN L+ MY+KCG +++S  VF  M  +D V+W  MI      G  E+A+  F  M +
Sbjct: 544 LQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEK 603

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN--ALLSLYADAGYL 408
            G++  +   I+ + +C+  G +  G     E +K     D  + +   ++ L + +  +
Sbjct: 604 SGIVPDSVVFIAIIYACSHSGLVDEGLACF-EKMKTHYKIDPMIEHYACVVDLLSRSQKI 662

Query: 409 SRCLKVFFLMP-EHDQVSWNSVIGA 432
           S+  +    MP + D   W SV+ A
Sbjct: 663 SKAEEFIQAMPIKPDASIWASVLRA 687



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 208/415 (50%), Gaps = 14/415 (3%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF-FLMPEHD 422
           LSS ++L  +   ++IH   + LGLDS    S  L+  Y+     +  L VF  + P  +
Sbjct: 14  LSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKN 70

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
              WNS+I AF+ +  L  EA+++Y  +R +  SP+  TF +++ A +     ++G  V+
Sbjct: 71  VYLWNSIIRAFSKN-GLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129

Query: 483 AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
            Q++     ++  + NAL+  Y + G +    ++F  M   RD VSWNS+ISGY  +   
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPV-RDLVSWNSLISGYSSHGYY 188

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
            +A+ +   +       D FT ++VL A  ++  +++G  +H   +++ +   VV+ + L
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGL 248

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           V MY K  R   A R FD M VR+  S+N+MI GY +    ++++ +F +  LD   PD 
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDL 307

Query: 663 VTFVGVLSACSHAGLVDEGF-KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
           +T   VL AC H  L D    K+  +     G + +    + ++D+  + G++    +  
Sbjct: 308 LTVSSVLRACGH--LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ-NAVNYVLLANM 775
           N M    +++ W +++    ++      +  K   M+  ME Q + + Y++L ++
Sbjct: 366 NSME-CKDTVSWNSIISGYIQSGDLMEAM--KLFKMMMIMEEQADHITYLMLISV 417



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 117/215 (54%), Gaps = 1/215 (0%)

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           A +SS ++ +L  ++HA VI   + +       L+  Y    E      +F R+S  ++ 
Sbjct: 13  ALSSSSNLNEL-RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
             WNS+I  +  N L P+A+     + +     D +TF +V+ ACA +   E G  V+  
Sbjct: 72  YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            +    E D+ +G+ALVDMYS+ G +  A + FD MPVR++ SWNS+ISGY+ HG+ ++A
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           L ++ ++K    +PD  T   VL A  +  +V +G
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 165/323 (51%), Gaps = 21/323 (6%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  +  +LK GF  +  + N LI+VY + GD+ +A  +F+ M  +++VSW  I+SGY  
Sbjct: 326 AKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQ 385

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYA--LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
            G   EA K+FK M+    ++   A  +  ++        +  KFG  +H   +KS    
Sbjct: 386 SGDLMEAMKLFKMMM----IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICI 441

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  VSN LI MY  C E  D + +IF  + T D ++WN++IS   + GD  +  ++ ++M
Sbjct: 442 DLSVSNALIDMYAKCGEVGD-SLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQM 500

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           ++      + P+  TF  L+T    + L+   L ++I   + + G  S+L +G+AL+  +
Sbjct: 501 RKS----EVVPDMATF--LVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMY 554

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLM-------EGRRKGKEVHGYLIRSGLFDMVAVG 294
           ++ G    + ++FE+M +++VV+  G++       EG  K  E    + +SG+     V 
Sbjct: 555 SKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEG-EKALETFADMEKSGIVPDSVVF 613

Query: 295 NGLVNMYAKCGTIDDSRSVFRFM 317
             ++   +  G +D+  + F  M
Sbjct: 614 IAIIYACSHSGLVDEGLACFEKM 636



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 11/210 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H   +K G   D+ + N LI++Y + G++  + K+F  M   ++V+W  ++S  
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISAC 484

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G      ++  +M ++  + +       L  C        + G ++HC +L+     
Sbjct: 485 VRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK--RLGKEIHCCLLRFGYES 542

Query: 122 DGLVSNVLIAMYGS--CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           +  + N LI MY    CLE++    R+FE +  RD+++W  +I  Y   G+     + F+
Sbjct: 543 ELQIGNALIEMYSKCGCLENSS---RVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFA 599

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
            M++ G    + P+   F ++I A   S L
Sbjct: 600 DMEKSG----IVPDSVVFIAIIYACSHSGL 625


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 289/878 (32%), Positives = 462/878 (52%), Gaps = 65/878 (7%)

Query: 99  CGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISW 158
           C     + G+ +H  ++K     D  +SN L+++YG C    + AR++F+E+  RD+ SW
Sbjct: 26  CNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAE-ARQLFDEMPCRDVASW 84

Query: 159 NSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQI 218
             ++S Y + G+     +LF  M   G  Y   PNE+T  + + +   S L       + 
Sbjct: 85  TMLMSAYGKIGNHEEALELFDSMLISG-EY---PNEFTLSTALRSC--SALREFNHGTRF 138

Query: 219 LAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME-------- 270
            A+V K+G  S+  +GSAL+  +++ G    A ++FE M   ++VS   ++         
Sbjct: 139 QALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSW 198

Query: 271 --------------------------------GRRKGKEVHGYLIRSGLFDMVAVGNGLV 298
                                           G   GK VH +L+   +   + +   LV
Sbjct: 199 SQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGLNYGKLVHAHLMMWRIELNLVLKTALV 258

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
           +MY KC +I+D+  V +  +  D   W  +ISG  Q+  + EAI  F  M   G++ +NF
Sbjct: 259 DMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNF 318

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD-AGYLSRCLKVFFL 417
           +    L++C+S+  + LG+QIH   +  GL++DVSV N+L+ +Y   +  +   ++ F  
Sbjct: 319 TYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRG 378

Query: 418 MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
           +   + +SW S+I  F++   L  E++K +  M+  G  PN  T   IL A  +      
Sbjct: 379 IASPNVISWTSLIAGFSE-HGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQ 437

Query: 478 GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI 537
             ++H  +IK N  N+  + NAL+  Y   G +DD   + + M + RD +++ S+ +   
Sbjct: 438 TRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMM-KHRDVITYTSLATRIN 496

Query: 538 HNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
                  A+N++  M +   R+D F+ A+ LSA A +  +E G ++H   V++ L   + 
Sbjct: 497 QTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWIS 556

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           + + LVD+Y KCG I  A R F  +   +  SWN +I G A +GH   AL+ F  M+L G
Sbjct: 557 VSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAG 616

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
             PD +T + VL ACSH GLVD G  +F+SM + +G+ PQL+ + C+VDLLGRAG L++ 
Sbjct: 617 VEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEA 676

Query: 718 EEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYA 777
              I  MP  P++LI++T+LGAC         LG   A    E++P +   YVLLAN+Y 
Sbjct: 677 MNVIETMPFKPDALIYKTLLGACKLHG--NIPLGEHMARQGLELDPSDPAFYVLLANLYD 734

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
             G+ E   K R+ M+E  V+K  G SW+  ++ VH+F AGD SHP+   I+EK++ L  
Sbjct: 735 DSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVHLFTAGDTSHPQIGKIHEKIESLIA 794

Query: 838 KMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGD 896
           + R+ G   Q   AL            ++HSEK+AVAF +++   K PIRI+KN+R+C D
Sbjct: 795 QFRNQGIWYQENRAL------------AHHSEKLAVAFGLISTPPKAPIRIIKNIRICRD 842

Query: 897 CHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CH     ++++V REI++RD NRFH F  G+CSC  YW
Sbjct: 843 CHDFIMNVTRLVDREIIVRDGNRFHSFKKGECSCRGYW 880



 Score =  270 bits (689), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 192/689 (27%), Positives = 331/689 (48%), Gaps = 64/689 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +D    H  I+K GF  D+FL N L+++Y +   +A A +LFDEMP R+  SW  ++S Y
Sbjct: 32  RDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAY 91

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   EA ++F  M+ +G   N + L + LR+C       F  G +   LV KS    
Sbjct: 92  GKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSAL--REFNHGTRFQALVTKSGFDS 149

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           + ++ + LI  Y  C   T  A R+FE +   D++SW  ++S + + G      +L+ RM
Sbjct: 150 NPVLGSALIDFYSKC-GCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRM 208

Query: 182 QREGFRYSLKPNEYTFGSLITAA------YSSVLSGSYLLQQI-LAMVKKAGLLS----- 229
            + G    + PNE+TF  L+ A+      Y  ++    ++ +I L +V K  L+      
Sbjct: 209 IQTG----VAPNEFTFVKLLAASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKC 264

Query: 230 ----------------DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR 273
                           D+++ +A++SGF +   F  A   F +M    VV  N    G  
Sbjct: 265 QSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGIL 324

Query: 274 K----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT-IDDSRSVFRFMIGKDS 322
                      GK++H  ++ +GL + V+VGN LV+MY KC   I+D+   FR +   + 
Sbjct: 325 NACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNV 384

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           +SW ++I+G  ++G  EE+I  F AM+  G+  ++F+L + L +C ++  +   +++HG 
Sbjct: 385 ISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGY 444

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV---IGAFADSEAL 439
            +K   D+DV V NAL+  YA  G +     V  +M   D +++ S+   I    + E  
Sbjct: 445 IIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEM- 503

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
              A+     M +     +G +  + L+AA+   + + G Q+H   +K  + +  ++ N 
Sbjct: 504 ---ALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNG 560

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  YGKCG + D  + F  ++E  D VSWN +I G   N  +  A++    M   G   
Sbjct: 561 LVDLYGKCGCIHDAHRSFLEITE-PDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEP 619

Query: 560 DHFTFATVLSACASVATLERGMEVHAC-----GVRACLEFDVVIGSALVDMYSKCGRIDY 614
           D  T   VL AC+    ++ G++         G+R  L+  V     LVD+  + GR++ 
Sbjct: 620 DQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYV----CLVDLLGRAGRLEE 675

Query: 615 ASRFFDLMPVR-NVYSWNSMISGYARHGH 642
           A    + MP + +   + +++     HG+
Sbjct: 676 AMNVIETMPFKPDALIYKTLLGACKLHGN 704



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 221/508 (43%), Gaps = 48/508 (9%)

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
           +SL+  + S  +   +  G  IH   +K+G   D+ +SN LLSLY     ++   ++F  
Sbjct: 16  YSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDE 75

Query: 418 MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
           MP  D  SW  ++ A+        EA++ +  M  +G  PN  T    L + S+      
Sbjct: 76  MPCRDVASWTMLMSAYGKI-GNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNH 134

Query: 478 GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI 537
           G +  A V K    +   + +AL+  Y KCG   +  ++F  M+   D VSW  M+S ++
Sbjct: 135 GTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNN-GDIVSWTMMVSSFV 193

Query: 538 HNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
                 +A+ L   M+Q G   + FTF  +L+A +S   L  G  VHA  +   +E ++V
Sbjct: 194 EAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAA-SSFLGLNYGKLVHAHLMMWRIELNLV 252

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           + +ALVDMY KC  I+ A +   L    +V+ W ++ISG+ +     +A+T F +M+  G
Sbjct: 253 LKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSG 312

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL--D 715
            +P++ T+ G+L+ACS    +D G K   S   + GL   +   + +VD+  +   +  D
Sbjct: 313 VVPNNFTYSGILNACSSILALDLG-KQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIED 371

Query: 716 KIEEF---------------------------------INKMPITPNSLIWRTVLGACCR 742
            +  F                                 +  + + PNS    T+LGAC  
Sbjct: 372 AVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGAC-- 429

Query: 743 ANCRKTELGRKAANMLFEMEPQNAVNYVLLAN----MYASGGKWEDVAKARKAMKEAEVK 798
              +     RK    + +    NA N V++ N     YA  G  +D       MK  +V 
Sbjct: 430 GTIKSLTQTRKLHGYIIK---NNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVI 486

Query: 799 KEAGCSWVTMKDGVHVFVAGDESHPEKD 826
                +    + G H       +H  KD
Sbjct: 487 TYTSLATRINQTGNHEMALNIITHMNKD 514


>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 280/793 (35%), Positives = 433/793 (54%), Gaps = 107/793 (13%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGN-----FYYARKIFEQM--IQKNVVSMNGL 268
           + I A   KAGLL+  Y+ + L+S +A         F  AR++F+++   Q+NV + N L
Sbjct: 43  RAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDEIPAAQRNVFTWNSL 102

Query: 269 MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
           +                             ++YAK G + D+R+VF  M  +D VSW  M
Sbjct: 103 L-----------------------------SLYAKSGRLADARAVFAEMPERDPVSWTVM 133

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           + GL++ G + EAI  F  M  DGL  + F+L + LSSCA+     +G+++H   +KLGL
Sbjct: 134 VVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGL 193

Query: 389 DSDVSVSNALLSLY-------------------------------ADAGYLSRCLKVFFL 417
            S V V+N++L++Y                               A  G +   L +F  
Sbjct: 194 SSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFEN 253

Query: 418 MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM-RRAGWSPNGVTFINILAAASSFSMGK 476
           MP+   VSWN+VI  + +   L ++A+ ++  M   +  +P+  T  ++L+A ++  M  
Sbjct: 254 MPDRTIVSWNAVIAGY-NQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVS 312

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCG---------------------------- 508
           +G QVHA +++  +     + NAL+S Y K G                            
Sbjct: 313 IGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEG 372

Query: 509 -----EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
                +M    ++F  MS R D V+W +MI GY  N    +AM L   M++ G   + +T
Sbjct: 373 YVKLGDMKHAREMFDVMSNR-DVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYT 431

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
            A VLS CAS+A LE G ++H   +R+  E    + +++V MY++ G + +A R FD + 
Sbjct: 432 VAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVH 491

Query: 624 VRN-VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
            R    +W SMI   A+HG G+ A+ LF +M   G  PD +TFVGVLSAC+H G VDEG 
Sbjct: 492 WRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGK 551

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
           ++F+ +   +G++P++  ++CMVDLL RAG   + +EFI +MP+ P+++ W ++L A CR
Sbjct: 552 RYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSA-CR 610

Query: 743 ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
            + +  +L   AA  L  ++P N+  Y  L+N+Y++ G+W D AK  K  K+  VKKE G
Sbjct: 611 VH-KNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETG 669

Query: 803 CSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKED 862
            SW  + + VHVF A D  HP++D +Y    ++   ++ AG+VP  +  L D++ E KE+
Sbjct: 670 FSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEE 729

Query: 863 LVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFH 921
           ++S HSEK+A+AF +++   K  +RIMKNLRVC DCH+A KFISK+  REI+LRD+ RFH
Sbjct: 730 MLSRHSEKLAIAFGLVSTPEKTTLRIMKNLRVCNDCHTAIKFISKVADREIILRDATRFH 789

Query: 922 HFNDGKCSCGDYW 934
           HF DG CSC DYW
Sbjct: 790 HFKDGFCSCKDYW 802



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 155/552 (28%), Positives = 263/552 (47%), Gaps = 73/552 (13%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +VF  N+L+++Y + G LA A  +F EMP+R+ VSW  +V G    G   EA KMF +MV
Sbjct: 95  NVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMV 154

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC-- 136
             G    ++ L +VL +C      G   G +VH  V+K   +    V+N ++ MYG C  
Sbjct: 155 TDGLSPTQFTLTNVLSSCAATEARG--VGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGD 212

Query: 137 ----------------------------LESTDCARRIFEEIETRDLISWNSIISVYSQR 168
                                       L   D A  +FE +  R ++SWN++I+ Y+Q 
Sbjct: 213 AETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQN 272

Query: 169 GDTISVFKLFSRMQREGFRYS-LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
           G        FSRM      YS + P+E+T  S+++A  +  L    + +Q+ A + ++ +
Sbjct: 273 GLNAKALWFFSRM----LSYSTMAPDEFTITSVLSACAN--LGMVSIGKQVHAYILRSRM 326

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQ--MIQKNVVSMNGLMEGRRKGKEVHGYLIRS 285
                V +AL+S +A+ G+   AR + +Q  M   NV+S   L+EG              
Sbjct: 327 PYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEG-------------- 372

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
                          Y K G +  +R +F  M  +D V+W  MI G +QNG  +EA+  F
Sbjct: 373 ---------------YVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELF 417

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             M R G   +++++ + LS CASL  +  G+QIH + ++   +   SVSN+++++YA +
Sbjct: 418 RLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARS 477

Query: 406 GYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
           G L    +VF  +    + V+W S+I A A    L  +AV  + +M R G  P+ +TF+ 
Sbjct: 478 GSLPWARRVFDRVHWRKETVTWTSMIVALA-QHGLGEDAVGLFEEMLRVGVKPDRITFVG 536

Query: 465 ILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           +L+A +       G +   Q+  K+ +  E +    ++    + G   + ++   +M   
Sbjct: 537 VLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVE 596

Query: 524 RDEVSWNSMISG 535
            D ++W S++S 
Sbjct: 597 PDAIAWGSLLSA 608



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 145/624 (23%), Positives = 282/624 (45%), Gaps = 103/624 (16%)

Query: 92  VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC----ARRIF 147
           +L+ CQ     G   G  +H   +K+       + N L++ Y             ARR+F
Sbjct: 29  LLQRCQTAANPGA--GRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLF 86

Query: 148 EEIET--RDLISWNSIISVYSQRGDTISVFKLFSRM-QREGFRYS--------------- 189
           +EI    R++ +WNS++S+Y++ G       +F+ M +R+   ++               
Sbjct: 87  DEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEA 146

Query: 190 -----------LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
                      L P ++T  +++++  ++   G  + +++ + V K GL S + V ++++
Sbjct: 147 IKMFLDMVTDGLSPTQFTLTNVLSSCAATEARG--VGRKVHSFVVKLGLSSCVPVANSVL 204

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLV 298
           + + + G+   AR +FE+M +++V S                              N +V
Sbjct: 205 NMYGKCGDAETARAVFERMPERSVSSW-----------------------------NAMV 235

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN- 357
           ++ A  G +D + S+F  M  +  VSWN +I+G +QNG   +A+  F  M     M+ + 
Sbjct: 236 SLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDE 295

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY---------- 407
           F++ S LS+CA+LG + +G+Q+H   L+  +     V+NAL+S+YA +G           
Sbjct: 296 FTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQ 355

Query: 408 -----------------------LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
                                  +    ++F +M   D V+W ++I  + +      EA+
Sbjct: 356 AVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGY-EQNGHNDEAM 414

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
           + +  M R+G  PN  T   +L+  +S +  + G Q+H + I+      +++ N++++ Y
Sbjct: 415 ELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMY 474

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            + G +    ++F R+  R++ V+W SMI     + L   A+ L   M++ G + D  TF
Sbjct: 475 ARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITF 534

Query: 565 ATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
             VLSAC  V  ++ G         +  +  ++   + +VD+ ++ G    A  F   MP
Sbjct: 535 VGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMP 594

Query: 624 VR-NVYSWNSMISGYARHGHGDKA 646
           V  +  +W S++S    H + D A
Sbjct: 595 VEPDAIAWGSLLSACRVHKNADLA 618



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 213/505 (42%), Gaps = 119/505 (23%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGL----------------------------------- 388
           L  C +      G+ IH   +K GL                                   
Sbjct: 30  LQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDEI 89

Query: 389 ---DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
                +V   N+LLSLYA +G L+    VF  MPE D VSW  ++    +      EA+K
Sbjct: 90  PAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGL-NRVGRFGEAIK 148

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            +LDM   G SP   T  N+L++ ++     +G +VH+ V+K  +++   + N++L+ YG
Sbjct: 149 MFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYG 208

Query: 506 KCGEMDDCEKIFARMSER------------------------------RDEVSWNSMISG 535
           KCG+ +    +F RM ER                              R  VSWN++I+G
Sbjct: 209 KCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAG 268

Query: 536 YIHNELLPKAMNLVWFMMQ----RGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC 591
           Y  N L  KA+   WF  +         D FT  +VLSACA++  +  G +VHA  +R+ 
Sbjct: 269 YNQNGLNAKAL---WFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSR 325

Query: 592 LEFDVVIGSALVDMYSKCGRID---------------------------------YASRF 618
           + +   + +AL+ MY+K G ++                                 +A   
Sbjct: 326 MPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREM 385

Query: 619 FDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLV 678
           FD+M  R+V +W +MI GY ++GH D+A+ LF  M   GP P+  T   VLS C+    +
Sbjct: 386 FDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACL 445

Query: 679 DEGFK-HFKSMSQVYGLIPQLEQFS-CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
           + G + H K+   +  L  Q    S  +V +  R+G L       +++     ++ W ++
Sbjct: 446 EYGKQIHCKA---IRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSM 502

Query: 737 LGACCRANCRKTELGRKAANMLFEM 761
           + A  +       LG  A  +  EM
Sbjct: 503 IVALAQHG-----LGEDAVGLFEEM 522



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 152/306 (49%), Gaps = 19/306 (6%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +V     L+  YV++GD+  A ++FD M +R+ V+W  ++ GY   G ++EA ++F+ M+
Sbjct: 362 NVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMI 421

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           R+G   N Y + +VL  C     +  ++G Q+HC  ++S Q     VSN ++ MY     
Sbjct: 422 RSGPEPNSYTVAAVLSVCASL--ACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARS-G 478

Query: 139 STDCARRIFEEIETR-DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
           S   ARR+F+ +  R + ++W S+I   +Q G       LF  M R G    +KP+  TF
Sbjct: 479 SLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVG----VKPDRITF 534

Query: 198 GSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
             +++A      V  G    QQ+     K G++ ++   + +V   AR G F  A++  +
Sbjct: 535 VGVLSACTHVGFVDEGKRYFQQLQ---DKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQ 591

Query: 256 QM-IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN-----GLVNMYAKCGTIDD 309
           QM ++ + ++   L+   R  K      + +     +  GN      L N+Y+ CG  +D
Sbjct: 592 QMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWND 651

Query: 310 SRSVFR 315
           +  +++
Sbjct: 652 AAKIWK 657



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 110/495 (22%), Positives = 196/495 (39%), Gaps = 141/495 (28%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNS---------------- 51
           H  ++K G +  V + N+++N+Y + GD  +A  +F+ MP+R+                 
Sbjct: 185 HSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRM 244

Query: 52  ---------------VSWACIVSGYTHKGMSNEACKMFKEMVRAGFLL-NRYALGSVLRA 95
                          VSW  +++GY   G++ +A   F  M+    +  + + + SVL A
Sbjct: 245 DLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSA 304

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC------------------- 136
           C   G      G QVH  +L+S   + G V+N LI+MY                      
Sbjct: 305 CANLGM--VSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLN 362

Query: 137 -------------LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
                        L     AR +F+ +  RD+++W ++I  Y Q G      +LF  M R
Sbjct: 363 VISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIR 422

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G     +PN YT  ++++   S  L+     +QI     ++       V +++V+ +AR
Sbjct: 423 SG----PEPNSYTVAAVLSVCAS--LACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYAR 476

Query: 244 LGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
            G+  +AR++F+++  +K  V+   ++            L + GL               
Sbjct: 477 SGSLPWARRVFDRVHWRKETVTWTSMIVA----------LAQHGL--------------- 511

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIS 362
                           G+D+V            G +EE       M R G+     + + 
Sbjct: 512 ----------------GEDAV------------GLFEE-------MLRVGVKPDRITFVG 536

Query: 363 TLSSCASLGWIMLG----QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
            LS+C  +G++  G    QQ+     K G+  ++S    ++ L A AG  S   +    M
Sbjct: 537 VLSACTHVGFVDEGKRYFQQLQD---KHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQM 593

Query: 419 P-EHDQVSWNSVIGA 432
           P E D ++W S++ A
Sbjct: 594 PVEPDAIAWGSLLSA 608



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 27/217 (12%)

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY-----ASRFF 619
           A +L  C + A    G  +HA  V+A L     + + L+  Y+            A R F
Sbjct: 27  ARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLF 86

Query: 620 DLMPV--RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGL 677
           D +P   RNV++WNS++S YA+ G    A  +F++M    P  D V++  ++   +  G 
Sbjct: 87  DEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEM----PERDPVSWTVMVVGLNRVGR 142

Query: 678 VDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD------KIEEFINKMPITPNSL 731
             E  K F  M    GL P   QF+ + ++L      +      K+  F+ K+ ++    
Sbjct: 143 FGEAIKMFLDMV-TDGLSPT--QFT-LTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVP 198

Query: 732 IWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
           +  +VL       C   E  R     +FE  P+ +V+
Sbjct: 199 VANSVLN--MYGKCGDAETARA----VFERMPERSVS 229


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 259/710 (36%), Positives = 413/710 (58%), Gaps = 36/710 (5%)

Query: 256 QMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
           Q + K ++     ++ + + K++H  ++R+ L    ++ + ++++Y+    + DS  +F 
Sbjct: 5   QNLCKTLLQNPSSVKSKSQAKQLHAQILRTSL-PSPSLLSTILSIYSNLNLLHDSLLIFN 63

Query: 316 FMIGKDS-VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
            +    + ++W ++I     +G +  ++  F  M   G    +    S L SC  +  + 
Sbjct: 64  SLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLR 123

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYA---------------DAG------------- 406
            G+ +HG  ++LG+  D+   NAL+++Y+               D G             
Sbjct: 124 FGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKES 183

Query: 407 -YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
            YL    KVF +MP+ D VSWN+VI   A +  +  +A+    +M  A   P+  T  ++
Sbjct: 184 YYLGSLRKVFEMMPKRDIVSWNTVISGNAQN-GMHEDALMMVREMGNADLRPDSFTLSSV 242

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           L   + +     G ++H   I+     +  I ++L+  Y KC  +DD  ++F  M  + D
Sbjct: 243 LPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVF-YMLPQHD 301

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
            +SWNS+I+G + N +  + +     M+    + +H +F++++ ACA + TL  G ++H 
Sbjct: 302 GISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHG 361

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
             +R+  + +V I SALVDMY+KCG I  A   FD M + ++ SW +MI GYA HGH   
Sbjct: 362 YIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYD 421

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
           A++LF +M+++G  P++V F+ VL+ACSHAGLVDE +K+F SM+Q Y +IP LE ++ + 
Sbjct: 422 AISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVA 481

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN 765
           DLLGR G L++  EFI+ M I P   +W T+L A CR + +  EL  K +  LF ++PQN
Sbjct: 482 DLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAA-CRVH-KNIELAEKVSKKLFTVDPQN 539

Query: 766 AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
              YVLL+N+Y++ G+W+D  K R AM++  +KK+  CSW+ +K+ VH FVAGD+SHP  
Sbjct: 540 IGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYY 599

Query: 826 DLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLP 884
           D I E LK L ++M   GYV  T   L D+E E K  L+  HSE++A+ F +++  +   
Sbjct: 600 DRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTT 659

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           IR+ KNLRVC DCH+A KFISKIVGREIV+RD++RFHHF DGKCSCGD+W
Sbjct: 660 IRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 224/476 (47%), Gaps = 59/476 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR-NSVSWACIVSGYT 62
           AK  H QIL+        L +T++++Y  +  L  +  +F+ +P    +++W  I+  YT
Sbjct: 24  AKQLHAQILRTSLPSPSLL-STILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYT 82

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G+   +   F +M+ +G   +     SVL++C        +FG  VH  +++    FD
Sbjct: 83  SHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLM--KDLRFGESVHGCIIRLGMGFD 140

Query: 123 GLVSNVLIAMYGS--CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
               N L+ MY     LE  +  +++F+E +T D+ S     S Y       S+ K+F  
Sbjct: 141 LYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLG-----SLRKVFEM 195

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY---LLQQILAMVKKAG---LLSDLYVG 234
           M +                    ++++V+SG+    + +  L MV++ G   L  D +  
Sbjct: 196 MPKRDI----------------VSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTL 239

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVG 294
           S+++  FA   N                           KGKE+HGY IR+G    V +G
Sbjct: 240 SSVLPIFAEYVNLL-------------------------KGKEIHGYAIRNGYDADVFIG 274

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           + L++MYAKC  +DDS  VF  +   D +SWN++I+G  QNG ++E +  F  M    + 
Sbjct: 275 SSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIK 334

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
            ++ S  S + +CA L  + LG+Q+HG  ++   D +V +++AL+ +YA  G +     +
Sbjct: 335 PNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWI 394

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
           F  M  +D VSW ++I  +A       +A+  +  M   G  PN V F+ +L A S
Sbjct: 395 FDKMELYDMVSWTAMIMGYA-LHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACS 449


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 269/757 (35%), Positives = 418/757 (55%), Gaps = 47/757 (6%)

Query: 221 MVKKAGLLS-DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-------- 271
           +V++ G+   D +  + L++ +A+LG    AR++F+ M ++N VS   LM+G        
Sbjct: 71  VVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFE 130

Query: 272 ---------RRKGKEVHGYLIRSGLFDMVA------------------------VGNGLV 298
                    +R+G EV+ +++ + L  +V                         VG  L+
Sbjct: 131 EALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALI 190

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
           + Y+ CG +  +R VF  ++GKD+V+W  M+S   +N   E A+  F  MR  G   + F
Sbjct: 191 DAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPF 250

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
            L S L +   L   +LG+ IHG  +K   D++  V  ALL +YA  G +     +F ++
Sbjct: 251 VLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMI 310

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
           P  D + W+ +I  +A S     +A + +L M R+   PN  +   +L A ++ +  +LG
Sbjct: 311 PHDDVILWSFLISRYAQS-CQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELG 369

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
            Q+H   IK    +E  + NAL+  Y KC  M++  +IF+ + +  +EVSWN++I GY  
Sbjct: 370 EQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDA-NEVSWNTIIVGYCQ 428

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
           +     A+++   M          TF++VL ACA+ ++++  +++H+   ++    D ++
Sbjct: 429 SGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIV 488

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            ++L+D Y+KCG I  A + F+ +   +V SWNS+IS YA HG    AL LF +M     
Sbjct: 489 CNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDI 548

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
             + VTFV +LS C   GLV++G   F SM   + + P +E ++C+V LLGRAG L    
Sbjct: 549 KANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDAL 608

Query: 719 EFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYAS 778
           +FI  +P TP+ ++WR +L +C     +   LGR AA  + ++EP +   YVLL+NMYA+
Sbjct: 609 KFIGDIPSTPSPMVWRALLSSCVVH--KNVALGRYAAEKVLDIEPHDETTYVLLSNMYAA 666

Query: 779 GGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQK 838
            G  ++VA  RK+M+   VKKEAG SWV +K  VH F  G   HP+  +I   L+ LN K
Sbjct: 667 AGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLK 726

Query: 839 MRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDC 897
               GYVP     L D++ E K  ++  HSE++A+A+ L+      PIRIMKNLR C DC
Sbjct: 727 ASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDC 786

Query: 898 HSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           H+ FK ISKIV REI++RD NRFHHF +G CSCGDYW
Sbjct: 787 HTMFKVISKIVQREIIVRDINRFHHFEEGICSCGDYW 823



 Score =  222 bits (566), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 180/659 (27%), Positives = 314/659 (47%), Gaps = 69/659 (10%)

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN--QTFDGLVSNVLIAMYGSCLESTD 141
           L+ YA    L+ C   G +  + G  VH  V++       D   +NVL+  Y   L    
Sbjct: 43  LDSYACARFLQRCIARGDA--RAGRAVHARVVQRGGVAQLDTFCANVLLNFYAK-LGPLA 99

Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
            ARR+F+ +  R+ +S+ +++  Y+ RG+     +LF R+QREG       N +   +++
Sbjct: 100 TARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEV----NHFVLTTIL 155

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
               +    G  L   I A   K G   + +VG+AL+  ++  G   +AR +F+ ++ K+
Sbjct: 156 KVLVTMDAPG--LACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKD 213

Query: 262 VVSMNGL---------------------MEGRRK--------------------GKEVHG 280
            V+   +                     M G +                     GK +HG
Sbjct: 214 AVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHG 273

Query: 281 YLIRSGLFDMVA-VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
             +++ L+D    VG  L++MYAKCG I+D+ ++F  +   D + W+ +IS   Q+   E
Sbjct: 274 CSVKT-LYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNE 332

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           +A   F  M R  ++ + FSL   L +CA++ ++ LG+QIH   +KLG +S++ V NAL+
Sbjct: 333 QAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALM 392

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
            +YA    +   L++F  + + ++VSWN++I  +  S     +A+  + +MR A      
Sbjct: 393 DMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQS-GFAEDALSVFHEMRAAHMLSTQ 451

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           VTF ++L A ++ S  K   Q+H+ + K    N+T + N+L+  Y KCG + D  K+F  
Sbjct: 452 VTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFES 511

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           + E  D VSWNS+IS Y  +     A+ L   M +   + +  TF ++LS C S   + +
Sbjct: 512 IVE-CDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQ 570

Query: 580 GMEVHAC-----GVRACLEFDVVIGSALVDMYSKCGRIDYASRFF-DLMPVRNVYSWNSM 633
           G+ +         ++  +E    I    V +  + GR+  A +F  D+    +   W ++
Sbjct: 571 GLWLFNSMMMDHRIKPSMEHYTCI----VRLLGRAGRLTDALKFIGDIPSTPSPMVWRAL 626

Query: 634 ISGYARHGHGDKALTLFSQMK-LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           +S      H + AL  ++  K LD    D  T+V + +  + AG++DE     KSM  V
Sbjct: 627 LSSCVV--HKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNV 683



 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 155/582 (26%), Positives = 273/582 (46%), Gaps = 56/582 (9%)

Query: 1   SKDAKLFHLQILKHG--FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIV 58
           ++  +  H ++++ G     D F  N L+N Y ++G LA+A +LFD MP+RN VS+  ++
Sbjct: 61  ARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLM 120

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
            GY  +G   EA ++F+ + R G  +N + L ++L+        G   G  +H    K  
Sbjct: 121 QGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACG--IHACACKLG 178

Query: 119 QTFDGLVSNVLIAMYGSCLESTDC-ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
              +  V   LI  Y  C     C AR +F+ I  +D ++W +++S YS+          
Sbjct: 179 HDRNAFVGTALIDAYSLC--GAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNT 236

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           FS+M+  GF    KPN +   S + AA    LS + L + I     K    ++ +VG AL
Sbjct: 237 FSKMRMTGF----KPNPFVLTSALKAAV--CLSSALLGKGIHGCSVKTLYDTEPHVGGAL 290

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVV---------------------------------- 263
           +  +A+ G+   A  IFE +   +V+                                  
Sbjct: 291 LDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNE 350

Query: 264 -SMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
            S++G+++          G+++H   I+ G    + VGN L++MYAKC  +++S  +F  
Sbjct: 351 FSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSS 410

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           +   + VSWNT+I G  Q+G  E+A+  F  MR   ++S+  +  S L +CA+   I   
Sbjct: 411 LQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHA 470

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
            QIH    K   ++D  V N+L+  YA  G++   LKVF  + E D VSWNS+I A+A  
Sbjct: 471 VQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYA-L 529

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV-HAQVIKYNVANETT 495
               + A++ +  M ++    N VTF+++L+   S  +   G  + ++ ++ + +     
Sbjct: 530 HGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSME 589

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI 537
               ++   G+ G + D  K    +      + W +++S  +
Sbjct: 590 HYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCV 631


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 274/778 (35%), Positives = 421/778 (54%), Gaps = 100/778 (12%)

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLI 283
           K GL   +Y+ + L++ +A+ G    A  +F +M  K   S N ++ G            
Sbjct: 3   KLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSG------------ 50

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
                            YAK G ++ +  VF  +  +DSVSW T+I G +Q G +E+AI 
Sbjct: 51  -----------------YAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIK 93

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            F  M +D ++ + F+L + L+SCA+ G   +G+++H   +KLGL + V V+N+LL++YA
Sbjct: 94  IFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYA 153

Query: 404 DAGYLS-------------------------RCLKV------FFLMPEHDQVSWNSVIGA 432
             G L                           C +V      F L+ E D VSWNS+I A
Sbjct: 154 KTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMI-A 212

Query: 433 FADSEALVSEAVKYYLD-MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA 491
             +     +EA++++   ++     P+  +  + L+A ++      G Q+H  +++    
Sbjct: 213 GCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFD 272

Query: 492 NETTIENALLSCYGKCG---------------------------------EMDDCEKIFA 518
               + NAL+S Y K G                                 ++    +IF 
Sbjct: 273 ASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFN 332

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
            + +  D V+W +MI GY+ N L   A+ +   M+  G R + FT A +LSA +SV +L 
Sbjct: 333 SLKDP-DVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLN 391

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM-PVRNVYSWNSMISGY 637
            G ++HA  +R+       +G+AL  MY+K G I+ A + F+L+   R+  SW SMI   
Sbjct: 392 HGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMAL 451

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
           A+HG G++A+ LF QM   G  PDH+T+VGVLSAC+H GLV++G  +F  M  V+ + P 
Sbjct: 452 AQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPT 511

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
           L  ++CMVDL GRAG L +  +F+  MP+ P+ + W ++L +C     +  +L + AA  
Sbjct: 512 LSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSC--KVYKNVDLAKVAAER 569

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           L  +EP N+  Y  LAN+Y+S GKW+D AK RK MK   VKKE G SWV +++  HVF  
Sbjct: 570 LLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGV 629

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-V 876
            D  HP+KD IY+ + ++ ++++  G+ P T+  L DLE E K+ ++ YHSEK+A+AF +
Sbjct: 630 EDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGI 689

Query: 877 LTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           ++      +RIMKNLRVC DCH+A KFISK+V REI++RD+ RFHHF DG CSC DYW
Sbjct: 690 ISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDREIIVRDATRFHHFKDGSCSCKDYW 747



 Score =  205 bits (522), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 176/644 (27%), Positives = 286/644 (44%), Gaps = 111/644 (17%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
            F  NT+++ Y + G L  A ++FD +P R+SVSW  I+ GY   G   +A K+F +MV+
Sbjct: 41  TFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVK 100

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC--- 136
              L  ++ L +VL +C   G  G   G +VH  V+K        V+N L+ MY      
Sbjct: 101 DKVLPTQFTLTNVLASCAATGSRGI--GKKVHSFVVKLGLHACVPVANSLLNMYAKTGDL 158

Query: 137 -----------LEST----------------DCARRIFEEIETRDLISWNSIISVYSQRG 169
                      L +T                D A   FE +  RD++SWNS+I+  +Q G
Sbjct: 159 KMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHG 218

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLS 229
                 + FS + ++    SLKP+ ++  S ++A  +  L      +QI   + +    +
Sbjct: 219 FDNEALQFFSSILKD---TSLKPDRFSLASALSACAN--LEKLSFGKQIHGYIVRTMFDA 273

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFD 289
              VG+AL+S +A+ G    AR+I EQ                            SG+ D
Sbjct: 274 SGAVGNALISMYAKSGGVEIARRIIEQ----------------------------SGISD 305

Query: 290 MVAVG-NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
           +  +    L+N Y K G I  +R +F  +   D V+W  MI G  QNG   +AI  F  M
Sbjct: 306 LDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTM 365

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
             +G   ++F+L + LS+ +S+  +  G+QIH   ++ G     SV NAL ++YA AG +
Sbjct: 366 VSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSI 425

Query: 409 SRCLKVFFLMPEH-DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +   KVF L+ ++ D VSW S+I A A    L  EA++ +  M   G  P+ +T++ +L+
Sbjct: 426 NGARKVFNLLRQNRDTVSWTSMIMALA-QHGLGEEAIELFEQMLTLGIKPDHITYVGVLS 484

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENA-LLSCYGKCGEMDDCEKIFARMSERRDE 526
           A +   + + G      +   +  + T    A ++  +G+ G + +  K    M    D 
Sbjct: 485 ACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDV 544

Query: 527 VSWNSMISG---YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
           ++W S++S    Y + +L                              A VA  ER + +
Sbjct: 545 IAWGSLLSSCKVYKNVDL------------------------------AKVAA-ERLLLI 573

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
                 A         SAL ++YS CG+ D A++   LM  R V
Sbjct: 574 EPNNSGAY--------SALANVYSSCGKWDDAAKIRKLMKARGV 609



 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 153/600 (25%), Positives = 267/600 (44%), Gaps = 126/600 (21%)

Query: 114 VLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTIS 173
           ++K   TF   + N L+ +Y       D A  +F E+  +   SWN+I+S Y+++G    
Sbjct: 1   MVKLGLTFSVYLMNNLMNLYAKTGFHLD-AHDLFNEMPVKTTFSWNTILSGYAKQG---- 55

Query: 174 VFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYV 233
                 ++++    + L P                                   + D   
Sbjct: 56  ------KLEKAHQVFDLIP-----------------------------------VRDSVS 74

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQ----------KNVVSMNGLMEGRRKGKEVHGYLI 283
            + ++ G+ ++G F  A KIF  M++           NV++       R  GK+VH +++
Sbjct: 75  WTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVV 134

Query: 284 RSGLFDMVAVGNGLVNMYAK-------------------------------CGTIDDSRS 312
           + GL   V V N L+NMYAK                               CG +D + +
Sbjct: 135 KLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALA 194

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD-GLMSSNFSLISTLSSCASLG 371
            F  +  +D VSWN+MI+G +Q+G   EA+  F ++ +D  L    FSL S LS+CA+L 
Sbjct: 195 QFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLE 254

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA-------------------------- 405
            +  G+QIHG  ++   D+  +V NAL+S+YA +                          
Sbjct: 255 KLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTAL 314

Query: 406 -------GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
                  G ++   ++F  + + D V+W ++I  +  +  L ++A++ +  M   G  PN
Sbjct: 315 LNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQN-GLNNDAIEVFKTMVSEGPRPN 373

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
             T   +L+A+SS +    G Q+HA  I+   A   ++ NAL + Y K G ++   K+F 
Sbjct: 374 SFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFN 433

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
            + + RD VSW SMI     + L  +A+ L   M+  G + DH T+  VLSAC     +E
Sbjct: 434 LLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVE 493

Query: 579 RGMEVHACGVRACLEFDVVIG--SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMIS 635
           +G       ++   + D  +   + +VD++ + G +  A +F + MP+  +V +W S++S
Sbjct: 494 QGRSYFDL-MKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLS 552



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 142/307 (46%), Gaps = 17/307 (5%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV     L+N YV++GD+  A ++F+ + D + V+W  ++ GY   G++N+A ++FK MV
Sbjct: 307 DVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMV 366

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             G   N + L ++L A      +    G Q+H   ++S +     V N L  MY     
Sbjct: 367 SEGPRPNSFTLAAMLSASSSV--TSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKA-G 423

Query: 139 STDCARRIFEEI-ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
           S + AR++F  + + RD +SW S+I   +Q G      +LF +M   G    +KP+  T+
Sbjct: 424 SINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLG----IKPDHITY 479

Query: 198 -GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
            G L    +  ++        ++  V K       Y  + +V  F R G    A K  E 
Sbjct: 480 VGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHY--ACMVDLFGRAGLLQEAYKFVEN 537

Query: 257 M-IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN-----GLVNMYAKCGTIDDS 310
           M ++ +V++   L+   +  K V    + +    ++   N      L N+Y+ CG  DD+
Sbjct: 538 MPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDA 597

Query: 311 RSVFRFM 317
             + + M
Sbjct: 598 AKIRKLM 604



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 143/330 (43%), Gaps = 73/330 (22%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNS------------- 51
           K  H  ++K G    V + N+L+N+Y + GDL  A  +FD M  RN+             
Sbjct: 127 KKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNC 186

Query: 52  ------------------VSWACIVSGYTHKGMSNEACKMFKEMVRAGFL-LNRYALGSV 92
                             VSW  +++G    G  NEA + F  +++   L  +R++L S 
Sbjct: 187 GRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASA 246

Query: 93  LRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC---------------- 136
           L AC         FG Q+H  ++++     G V N LI+MY                   
Sbjct: 247 LSACANL--EKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGIS 304

Query: 137 ----------------LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
                           L     AR+IF  ++  D+++W ++I  Y Q G      ++F  
Sbjct: 305 DLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKT 364

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M  EG R    PN +T  ++++A+ SSV S ++  +QI A   ++G      VG+AL + 
Sbjct: 365 MVSEGPR----PNSFTLAAMLSAS-SSVTSLNH-GKQIHASAIRSGEALSPSVGNALTTM 418

Query: 241 FARLGNFYYARKIFEQMIQ-KNVVSMNGLM 269
           +A+ G+   ARK+F  + Q ++ VS   ++
Sbjct: 419 YAKAGSINGARKVFNLLRQNRDTVSWTSMI 448



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 6/139 (4%)

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
           V+  L F V + + L+++Y+K G    A   F+ MPV+  +SWN+++SGYA+ G  +KA 
Sbjct: 2   VKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAH 61

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD- 706
            +F  +    P+ D V++  ++   +  G  ++  K F  M +   L  Q    + +   
Sbjct: 62  QVFDLI----PVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASC 117

Query: 707 -LLGRAGELDKIEEFINKM 724
              G  G   K+  F+ K+
Sbjct: 118 AATGSRGIGKKVHSFVVKL 136


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 268/718 (37%), Positives = 412/718 (57%), Gaps = 16/718 (2%)

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLME------GRRKGKE 277
           +SD+ V +AL+SG+A+ G+      +F +M    ++ +  +++ +++          G+ 
Sbjct: 158 VSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEV 217

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VHG L + G     AVGN L+  YAK     D+  VF  M  +D +SWN+MISG   NG 
Sbjct: 218 VHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGL 277

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
           Y++AI  F  M  +G    + +L+S L +CA L  + LG+ +HG  +K G  S  S++N 
Sbjct: 278 YDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANV 337

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           LL +Y++        K+F  M + + VSW ++I ++  +  L  +    + +M   G  P
Sbjct: 338 LLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRA-GLYDKVAGLFQEMGLEGTRP 396

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           +     + L A +   + K G  VH   I+  +     + NAL+  Y KCG M++ + IF
Sbjct: 397 DIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIF 456

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
             +  + D +SWN++I GY  N L  +A +L   M+ +  R +  T   +L A AS+++L
Sbjct: 457 DGVVSK-DMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSL 514

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
           ERG E+HA  +R     D  + +AL+DMY KCG +  A R FD +  +N+ SW  M++GY
Sbjct: 515 ERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGY 574

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
             HG G  A+ LF QM++ G  PD  +F  +L ACSH+GL DEG++ F +M + + + P+
Sbjct: 575 GMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPR 634

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
           L+ ++CMVDLL   G L +  EFI+ MPI P+S IW ++L   CR + R  +L  + A  
Sbjct: 635 LKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRG-CRIH-RNVKLAEEVAER 692

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           +FE+EP+N   YVLLAN+YA   +WE V K +  +    +++  GCSW+  K  VHVF+A
Sbjct: 693 VFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIA 752

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-V 876
            + +HP+   I E L E+ ++M++ G+ P+ K+AL   +     + +  HS K+AVAF V
Sbjct: 753 DNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKKYALMGADNAVHGEALCGHSSKLAVAFGV 812

Query: 877 LTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           L  +    IR+ KN RVC  CH A KFISK+  REI+LRDSNRFHHF  G+CSC  YW
Sbjct: 813 LNLSEGRLIRVTKNSRVCSHCHEAAKFISKMCSREIILRDSNRFHHFEQGRCSCRGYW 870



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 130/413 (31%), Positives = 207/413 (50%), Gaps = 11/413 (2%)

Query: 275 GKEVHGYLIRSGLF-----DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS-WNTM 328
           GK  H +L+R+        D V +G  LV MY KCG ++++R VF  M     V  W  +
Sbjct: 110 GKRAH-FLVRASSLGRDGMDNV-LGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTAL 167

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           +SG  + G   E ++ F  M   G+    +++   L   A LG I  G+ +HG   KLG 
Sbjct: 168 MSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGF 227

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
            S  +V NAL++ YA +      + VF  MP  D +SWNS+I     S  L  +A++ ++
Sbjct: 228 GSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISG-CTSNGLYDKAIELFV 286

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            M   G   +  T +++L A +   +  LG  VH   +K    ++T++ N LL  Y  C 
Sbjct: 287 RMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCS 346

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
           +     KIF  M + ++ VSW +MI+ Y    L  K   L   M   G R D F   + L
Sbjct: 347 DWRSTNKIFRNMVQ-KNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSAL 405

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
            A A    L+ G  VH   +R  +E  + + +AL++MY KCG ++ A   FD +  +++ 
Sbjct: 406 HAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMI 465

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           SWN++I GY+R+   ++A +LF++M L    P+ VT   +L A +    ++ G
Sbjct: 466 SWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERG 517



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 156/600 (26%), Positives = 277/600 (46%), Gaps = 63/600 (10%)

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL---VSNVLIAMYGSCLESTDCARRI 146
           G+VL+ C E      + G + H LV  S+   DG+   +   L+ MY  C +  + ARR+
Sbjct: 95  GAVLQLCSEV--RSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLEN-ARRV 151

Query: 147 FEEI-ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--A 203
           F+E+ +  D+  W +++S Y++ GD      LF +M   G R    P+ YT   ++   A
Sbjct: 152 FDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVR----PDAYTISCVLKCIA 207

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
              S+  G    + +  +++K G  S   VG+AL++ +A+      A  +F+ M  ++V+
Sbjct: 208 GLGSIEDG----EVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVI 263

Query: 264 SMNGLMEGRRK-----------------------------------------GKEVHGYL 282
           S N ++ G                                            G+ VHGY 
Sbjct: 264 SWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYS 323

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
           +++G     ++ N L++MY+ C     +  +FR M+ K+ VSW  MI+   + G Y++  
Sbjct: 324 VKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVA 383

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
             F  M  +G     F++ S L + A    +  G+ +HG  ++ G++  ++V+NAL+ +Y
Sbjct: 384 GLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMY 443

Query: 403 ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
              G +     +F  +   D +SWN++IG ++ +  L +EA   + +M      PN VT 
Sbjct: 444 VKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNN-LANEAFSLFTEMLLQ-LRPNAVTM 501

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
             IL AA+S S  + G ++HA  ++     +  + NAL+  Y KCG +    ++F R+S 
Sbjct: 502 TCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSN 561

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
            ++ +SW  M++GY  +     A+ L   M   G   D  +F+ +L AC+     + G  
Sbjct: 562 -KNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWR 620

Query: 583 -VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYARH 640
              A      +E  +   + +VD+    G +  A  F D MP+    S W S++ G   H
Sbjct: 621 FFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIH 680



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 228/494 (46%), Gaps = 53/494 (10%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVS-WACIVSGYTHKGMSNEACKMFKEM 77
           D  L   L+ +Y++ GDL +A ++FDEMP  + V  W  ++SGY   G   E   +F++M
Sbjct: 128 DNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKM 187

Query: 78  VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
              G   + Y +  VL+     G    + G  VH L+ K        V N L+A Y    
Sbjct: 188 HCCGVRPDAYTISCVLKCI--AGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSN 245

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
            + D A  +F+ +  RD+ISWNS+IS  +  G      +LF RM  EG       +  T 
Sbjct: 246 RTKD-AILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEEL----DSATL 300

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            S++ A   + L   +L + +     K G +S   + + L+  ++   ++    KIF  M
Sbjct: 301 LSVLPAC--AELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNM 358

Query: 258 IQKNVVSMNGL---------------------MEGRRK--------------------GK 276
           +QKNVVS   +                     +EG R                     GK
Sbjct: 359 VQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGK 418

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
            VHGY IR+G+  ++AV N L+ MY KCG +++++ +F  ++ KD +SWNT+I G  +N 
Sbjct: 419 SVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNN 478

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
              EA   F  M    L  +  ++   L + ASL  +  G+++H   L+ G   D  V+N
Sbjct: 479 LANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVAN 537

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           AL+ +Y   G L    ++F  +   + +SW  ++  +        +A+  +  MR +G +
Sbjct: 538 ALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYG-MHGRGRDAIALFEQMRVSGIA 596

Query: 457 PNGVTFINILAAAS 470
           P+  +F  IL A S
Sbjct: 597 PDAASFSAILYACS 610



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 190/415 (45%), Gaps = 59/415 (14%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +D ++ H  + K GF     + N L+  Y +      A  +FD MP R+ +SW  ++SG 
Sbjct: 213 EDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGC 272

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           T  G+ ++A ++F  M   G  L+   L SVL AC E        G  VH   +K+    
Sbjct: 273 TSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHL--LFLGRVVHGYSVKTGFIS 330

Query: 122 DGLVSNVLIAMYGSCLE--STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
              ++NVL+ MY +C +  ST+   +IF  +  ++++SW ++I+ Y++ G    V  LF 
Sbjct: 331 QTSLANVLLDMYSNCSDWRSTN---KIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQ 387

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVGSA 236
            M  EG R    P+ +   S + A      +G+ LL+    +     + G+   L V +A
Sbjct: 388 EMGLEGTR----PDIFAITSALHA-----FAGNELLKHGKSVHGYAIRNGMEKVLAVTNA 438

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------ 272
           L+  + + GN   A+ IF+ ++ K+++S N L+ G                         
Sbjct: 439 LMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQLRPNA 498

Query: 273 ----------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                            +G+E+H Y +R G  +   V N L++MY KCG +  +R +F  
Sbjct: 499 VTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDR 558

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           +  K+ +SW  M++G   +G   +AI  F  MR  G+     S  + L +C+  G
Sbjct: 559 LSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSG 613



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 163/352 (46%), Gaps = 43/352 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            ++ H   +K GF     L N L+++Y    D  S +K+F  M  +N VSW  +++ YT 
Sbjct: 316 GRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTR 375

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+ ++   +F+EM   G   + +A+ S L A    G    K G  VH   +++      
Sbjct: 376 AGLYDKVAGLFQEMGLEGTRPDIFAITSALHAF--AGNELLKHGKSVHGYAIRNGMEKVL 433

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V+N L+ MY  C  + + A+ IF+ + ++D+ISWN++I  YS+       F LF+ M  
Sbjct: 434 AVTNALMEMYVKC-GNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLL 492

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           +     L+PN  T   ++ AA S  LS     +++ A   + G L D +V +AL+  + +
Sbjct: 493 Q-----LRPNAVTMTCILPAAAS--LSSLERGREMHAYALRRGYLEDDFVANALIDMYVK 545

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
            G    AR++F+++  KN++S   ++ G                             Y  
Sbjct: 546 CGALLLARRLFDRLSNKNLISWTIMVAG-----------------------------YGM 576

Query: 304 CGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
            G   D+ ++F  M    I  D+ S++ ++     +G  +E    F AMR++
Sbjct: 577 HGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKE 628



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 125/269 (46%), Gaps = 7/269 (2%)

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
           +  +   L+  Y KCG++++  ++F  M +  D   W +++SGY     L + + L   M
Sbjct: 128 DNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKM 187

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRI 612
              G R D +T + VL   A + ++E G  VH    +        +G+AL+  Y+K  R 
Sbjct: 188 HCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRT 247

Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
             A   FD MP R+V SWNSMISG   +G  DKA+ LF +M L+G   D  T + VL AC
Sbjct: 248 KDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPAC 307

Query: 673 SHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI 732
           +   L+  G +     S   G I Q    + ++D+     +     +    M +  N + 
Sbjct: 308 AELHLLFLG-RVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNM-VQKNVVS 365

Query: 733 WRTVLGACCRANCRKTELGRKAANMLFEM 761
           W  ++ +  RA      L  K A +  EM
Sbjct: 366 WTAMITSYTRAG-----LYDKVAGLFQEM 389



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 152/341 (44%), Gaps = 16/341 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H   +++G    + + N L+ +YV+ G++  A  +FD +  ++ +SW  ++ GY
Sbjct: 415 KHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGY 474

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +   ++NEA  +F EM+      N   +  +L A      S  + G ++H   L+     
Sbjct: 475 SRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASL--SSLERGREMHAYALRRGYLE 531

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V+N LI MY  C  +   ARR+F+ +  ++LISW  +++ Y   G       LF +M
Sbjct: 532 DDFVANALIDMYVKC-GALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQM 590

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           +  G    + P+  +F +++ A   S L      +   AM K+  +   L   + +V   
Sbjct: 591 RVSG----IAPDAASFSAILYACSHSGLRDEG-WRFFDAMRKEHKIEPRLKHYTCMVDLL 645

Query: 242 ARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG--- 296
              GN   A +  + M I+ +      L+ G R  + V     +   +F++     G   
Sbjct: 646 INTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYV 705

Query: 297 -LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
            L N+YA+    +  R + +  IG   +  NT  S ++  G
Sbjct: 706 LLANIYAEAERWEAVRKL-KNKIGGRGLRENTGCSWIEAKG 745


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 271/718 (37%), Positives = 411/718 (57%), Gaps = 18/718 (2%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKN-----------VVSMNGLMEGRRKGKEV 278
           DL++ + L+ GF+  G    +  ++  + +K             +S    +E  R G  +
Sbjct: 76  DLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLL 135

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H + I  G+   + VG+ +V++Y K    + +R VF  M  +D+V WNTMISG  +N  +
Sbjct: 136 HAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYF 195

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           E++I  F  M   GL   + +L + L++ A L    LG  I     K GL SDV V   L
Sbjct: 196 EDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGL 255

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           +SLY+  G   +   +F  + + D +S+N++I  +  +    S AV  + ++  +G   N
Sbjct: 256 ISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETES-AVTLFRELLASGQRVN 314

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
             T + ++     F+  +L   +    +K  +  + ++  AL + Y +  E+    ++F 
Sbjct: 315 SSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFD 374

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
             S  +   SWN+MISGY  N L  +A++L   MM +    +  T  ++LSACA +  L 
Sbjct: 375 E-SPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSP-NPVTVTSILSACAQLGALS 432

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
            G  VH       LE +V + +ALVDMY+KCG I  A + FDLM  +NV +WN+MI+GY 
Sbjct: 433 IGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYG 492

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
            HGHG +AL LF +M   G  P  VTF+ +L ACSH+GLV EG + F SM+  YG  P  
Sbjct: 493 LHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMS 552

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
           E ++CMVD+LGRAG+L    EFI +MP+ P   +W  +LGAC     + TE+   A+  L
Sbjct: 553 EHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIH--KNTEMANVASKRL 610

Query: 759 FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
           F+++P+N   YVLL+N+Y++   +   A  R+ +K+ ++ K  GC+ + + D  +VF +G
Sbjct: 611 FQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSG 670

Query: 819 DESHPEKDLIYEKLKELNQKMRDAGYVPQT-KFALFDLEPESKEDLVSYHSEKIAVAF-V 876
           D SHP+   I+E L++L  KMR+AGY  +T   AL D+E E KE +V+ HSEK+A+AF +
Sbjct: 671 DRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGL 730

Query: 877 LTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           ++      IRI+KNLRVC DCH+A KFISKI  R IV+RD+NRFHHF +G CSCGDYW
Sbjct: 731 ISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 219/471 (46%), Gaps = 55/471 (11%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           L H   +  G A ++F+ + ++++Y +      A K+FD MP+R++V W  ++SG++   
Sbjct: 134 LLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNS 193

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
              ++ ++F +M+  G   +   L +VL A  E     ++ GM + CL  K     D  V
Sbjct: 194 YFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAEL--QEYRLGMGIQCLASKKGLHSDVYV 251

Query: 126 SNVLIAMYGSCLESTDCARRI-FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
              LI++Y  C +S  C  RI F++I+  DLIS+N++IS Y+   +T S   LF  +   
Sbjct: 252 LTGLISLYSKCGKS--CKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLAS 309

Query: 185 GFRYSLKPNEYTFGSLITAAYS-SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           G R     N  T   LI      + L  S L+Q    +  K G++    V +AL + + R
Sbjct: 310 GQRV----NSSTLVGLIPVYLPFNHLQLSRLIQN---LSLKIGIILQPSVSTALTTVYCR 362

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------------------------- 274
           L    +AR++F++  +K++ S N ++ G  +                             
Sbjct: 363 LNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSIL 422

Query: 275 -----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      GK VHG +    L   V V   LV+MYAKCG+I ++R +F  M+ K+ V
Sbjct: 423 SACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVV 482

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI-HGE 382
           +WN MI+G   +G  +EA+  F  M + G+  +  + +S L +C+  G +  G +I H  
Sbjct: 483 TWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSM 542

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
               G          ++ +   AG L+  L+    MP E     W +++GA
Sbjct: 543 ANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGA 593



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 133/583 (22%), Positives = 251/583 (43%), Gaps = 86/583 (14%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           Q++ HG  YD+     L + +  +G +A   +LF+++   +   +  ++ G++  G+   
Sbjct: 36  QLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKS 95

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHC----------LVLKSNQ 119
           +  ++                  LR      P  F +   +            ++L ++ 
Sbjct: 96  SIFLYTH----------------LRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHS 139

Query: 120 TFDGLVSNVLIAMYGSCL-------ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTI 172
             DG+ SN+ +   GS +          + AR++F+ +  RD + WN++IS +S+     
Sbjct: 140 IVDGVASNLFV---GSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFE 196

Query: 173 SVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLY 232
              ++F  M   G  +    +  T  +++TA   + L    L   I  +  K GL SD+Y
Sbjct: 197 DSIRVFVDMLDVGLSF----DSTTLATVLTAV--AELQEYRLGMGIQCLASKKGLHSDVY 250

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHG------------ 280
           V + L+S +++ G     R +F+Q+ Q +++S N ++ G     E               
Sbjct: 251 VLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASG 310

Query: 281 --------------YL---------------IRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
                         YL               ++ G+    +V   L  +Y +   +  +R
Sbjct: 311 QRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFAR 370

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
            +F     K   SWN MISG  QNG  + AI  F  M    L  +  ++ S LS+CA LG
Sbjct: 371 QLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLG 429

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
            + +G+ +HG      L+S+V VS AL+ +YA  G +    ++F LM + + V+WN++I 
Sbjct: 430 ALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMIT 489

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV-HAQVIKYNV 490
            +        EA+K + +M ++G  P GVTF++IL A S   +   G+++ H+    Y  
Sbjct: 490 GYG-LHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGF 548

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
              +     ++   G+ G++ +  +   RM        W +++
Sbjct: 549 QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALL 591



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/439 (25%), Positives = 200/439 (45%), Gaps = 35/439 (7%)

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
            ++ L++  +L  ++   QI  + +  G+  D+S    L   + D G ++   ++F  + 
Sbjct: 17  FLTLLNNATTLSQLL---QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVS 73

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR-AGWSPNGVTFINILAAASSFSMGKLG 478
           + D   +N +I  F+D+  L   ++  Y  +R+     P+  T+   ++AAS     ++G
Sbjct: 74  KPDLFLFNVLIRGFSDN-GLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVG 132

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
             +HA  I   VA+   + +A++  Y K    +   K+F  M E RD V WN+MISG+  
Sbjct: 133 VLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPE-RDTVLWNTMISGFSR 191

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
           N     ++ +   M+  G   D  T ATVL+A A +     GM +     +  L  DV +
Sbjct: 192 NSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYV 251

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            + L+ +YSKCG+       FD +   ++ S+N+MISGY  +   + A+TLF ++   G 
Sbjct: 252 LTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQ 311

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHF------KSMSQVYGLIPQLEQFSCMVDLLGRAG 712
             +  T VG++        V   F H       +++S   G+I Q    + +  +  R  
Sbjct: 312 RVNSSTLVGLIP-------VYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLN 364

Query: 713 ELDKIEEFINKMPITPNSLI-WRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVL 771
           E+    +  ++ P    SL  W  ++    +       L  +A ++  EM PQ + N V 
Sbjct: 365 EVQFARQLFDESP--EKSLASWNAMISGYTQNG-----LTDRAISLFQEMMPQLSPNPVT 417

Query: 772 LANMYA--------SGGKW 782
           + ++ +        S GKW
Sbjct: 418 VTSILSACAQLGALSIGKW 436


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 318/959 (33%), Positives = 490/959 (51%), Gaps = 146/959 (15%)

Query: 32  RVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGS 91
           R+G L  A ++FD MP R+ ++W  ++  Y + GM +           AG  L     G 
Sbjct: 45  RLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPD-----------AGRSLADAISGG 93

Query: 92  VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE 151
            LR                                 +L++ Y       D ARR+F+ + 
Sbjct: 94  NLR------------------------------TGTILLSGYARAGRVRD-ARRVFDGMG 122

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
            R+ ++WN++++ Y Q GD     KLF  M                 S   ++++++L+G
Sbjct: 123 VRNTVAWNAMVTCYVQNGDITLARKLFDAMP----------------SRDVSSWNTMLTG 166

Query: 212 ---SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI-------QKN 261
              S L+++   + ++    + +   + ++SG+  +     A  +F  M+       Q N
Sbjct: 167 YCHSQLMEEARNLFERMPERNGVS-WTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPN 225

Query: 262 VVSMNGLMEGRRKGKE-----VHGYLIRSGLFDMVAVGNGLVNMYAK-CGTIDDSRSVFR 315
           +VS+  L   R  GK      +H  + ++G    V VG  ++N Y K    +D +   F 
Sbjct: 226 LVSV--LSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFE 283

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI-- 373
            M  ++  +W+T+I+ L Q G  ++A   F   +RD L S   S  S L+  A  G I  
Sbjct: 284 GMAARNEYTWSTIIAALSQAGRIDDA---FAVYQRDPLKSVP-SRTSMLTGLARYGRIDD 339

Query: 374 --MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
             +L  QIH        + +V   NA+++ Y     +     +F  MP  + +SW  +I 
Sbjct: 340 AKILFDQIH--------EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIA 391

Query: 432 AFA----DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
            +A      +ALVS        + R G  P+  +  +   A S+    + G QVH+  +K
Sbjct: 392 GYARNGRSEQALVSLQA-----LHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVK 446

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
                 + + NAL++ YGK   +    +IF RM+ + D VS+NS +S  + N L  +A +
Sbjct: 447 AGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVK-DTVSYNSFMSALVQNNLFDEARD 505

Query: 548 LVWFMMQRGQRLDHFTFATVLSACA----------------------------------- 572
           +   M       D  ++ T++SACA                                   
Sbjct: 506 VFNNM----PSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSG 561

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
           ++   + G ++H   ++  ++  +V+ +ALV MY KC   D + + FD M  R++++WN+
Sbjct: 562 NLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSAD-SLKVFDSMEERDIFTWNT 620

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           +I+GYA+HG G +A+ ++  M   G LP+ VTFVG+L ACSH+GLVDEG + FKSMS  Y
Sbjct: 621 IITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDY 680

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
           GL P LE ++CMVDLLGRAG++   E FI  MPI P+S+IW  +LGAC     +  E+GR
Sbjct: 681 GLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGAC--KIHKNVEIGR 738

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
           +AA  LF +EP NA NYV+L+N+Y+S G W++VAK RK MKE  V K+ GCSW+ +K+ +
Sbjct: 739 RAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKM 798

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
           H FV GDE H +   IY  L EL   ++  GYVP T F L D++ E KE  + YHSEK+A
Sbjct: 799 HSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEEQKESSLLYHSEKLA 858

Query: 873 VAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           VA+ L    K +PI+IMKNLR+CGDCH+  KF+S +  REI +RD NRFHHF +G CSC
Sbjct: 859 VAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSSVTKREIDVRDGNRFHHFRNGSCSC 917



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 155/588 (26%), Positives = 245/588 (41%), Gaps = 91/588 (15%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV   NT++  Y     +  A  LF+ MP+RN VSW  ++SGY        A  MF+ M+
Sbjct: 156 DVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTML 215

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             G    +  L SVL A +  G  G      +H LV K+    D +V   ++  Y   + 
Sbjct: 216 CEGMTPEQPNLVSVLSAVRHLGKPGIL--ESIHVLVHKTGFERDVVVGTAILNGYTKDVN 273

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             D A + FE +  R+  +W++II+  SQ G     F ++   QR+  +          G
Sbjct: 274 MLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVY---QRDPLKSVPSRTSMLTG 330

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
               A Y  +     L  QI           ++   +A+++G+ +      A  +F +M 
Sbjct: 331 ---LARYGRIDDAKILFDQIHE--------PNVVSWNAMITGYMQNEMVDEAEDLFNRMP 379

Query: 259 QKNVVSMNGLMEG-----------------RRK------------------------GKE 277
            +N +S  G++ G                  RK                        GK+
Sbjct: 380 FRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQ 439

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VH   +++G      V N L+ +Y K  +I   R +F  M  KD+VS+N+ +S L QN  
Sbjct: 440 VHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNL 499

Query: 338 YEEA-----------------IMNFCA--------------MRRDGLMSSNFSLISTLSS 366
           ++EA                 I++ CA              M  +  + +   L   L  
Sbjct: 500 FDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGL 559

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSW 426
             +LG   LGQQIH   +KLG+DS + V+NAL+S+Y      +  LKVF  M E D  +W
Sbjct: 560 SGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSS-ADSLKVFDSMEERDIFTW 618

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
           N++I  +A    L  EA++ Y  M  AG  PN VTF+ +L A S   +   GHQ    + 
Sbjct: 619 NTIITGYA-QHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMS 677

Query: 487 K-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
             Y +         ++   G+ G++   E     M    D V W++++
Sbjct: 678 SDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALL 725



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 138/553 (24%), Positives = 245/553 (44%), Gaps = 99/553 (17%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM----------EGRRKGKEVHGYLIR 284
           SA +    RLG  + AR++F+ M  +++++ N ++           GR     + G  +R
Sbjct: 37  SARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLR 96

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG-------- 336
           +G          L++ YA+ G + D+R VF  M  +++V+WN M++   QNG        
Sbjct: 97  TGTI--------LLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKL 148

Query: 337 -------------------CY----EEAIMNFCAM-RRDG----LMSSNFSLI------- 361
                              C+    EEA   F  M  R+G    +M S + LI       
Sbjct: 149 FDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAW 208

Query: 362 -------------------STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
                              S LS+   LG   + + IH    K G + DV V  A+L+ Y
Sbjct: 209 DMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGY 268

Query: 403 A-DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
             D   L   +K F  M   ++ +W+++I A + +  +      Y  D  ++   P+  +
Sbjct: 269 TKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKS--VPSRTS 326

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
            +  LA        K+   +  Q+ + NV +     NA+++ Y +   +D+ E +F RM 
Sbjct: 327 MLTGLARYGRIDDAKI---LFDQIHEPNVVS----WNAMITGYMQNEMVDEAEDLFNRMP 379

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
             R+ +SW  MI+GY  N    +A+  +  + ++G      +  +   AC+++  LE G 
Sbjct: 380 -FRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGK 438

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           +VH+  V+A  +F+  + +AL+ +Y K   I    + FD M V++  S+NS +S   ++ 
Sbjct: 439 QVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNN 498

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
             D+A  +F+ M    P PD V++  ++SAC+ A   +E  + F+SM        +L   
Sbjct: 499 LFDEARDVFNNM----PSPDVVSWTTIISACAQADQGNEAVEIFRSMLHER----ELPNP 550

Query: 702 SCMVDLLGRAGEL 714
             +  LLG +G L
Sbjct: 551 PILTILLGLSGNL 563



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 167/383 (43%), Gaps = 52/383 (13%)

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
            S  +A +      G L    +VF  MP  D ++WNS+I A+ ++   + +A +   D  
Sbjct: 33  TSAQSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNG--MPDAGRSLADAI 90

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             G    G   ++  A A      +       +V        T   NA+++CY + G++ 
Sbjct: 91  SGGNLRTGTILLSGYARAGRVRDAR-------RVFDGMGVRNTVAWNAMVTCYVQNGDIT 143

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV----------WFMM-------- 553
              K+F  M   RD  SWN+M++GY H++L+ +A NL           W +M        
Sbjct: 144 LARKLFDAMPS-RDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIE 202

Query: 554 QRGQRLDHF-------------TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
           Q G+  D F                +VLSA   +        +H    +   E DVV+G+
Sbjct: 203 QHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGT 262

Query: 601 ALVDMYSK-CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           A+++ Y+K    +D A +FF+ M  RN Y+W+++I+  ++ G  D A  ++ +     PL
Sbjct: 263 AILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQR----DPL 318

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
               +   +L+  +  G +D+    F  + +     P +  ++ M+    +   +D+ E+
Sbjct: 319 KSVPSRTSMLTGLARYGRIDDAKILFDQIHE-----PNVVSWNAMITGYMQNEMVDEAED 373

Query: 720 FINKMPITPNSLIWRTVLGACCR 742
             N+MP   N++ W  ++    R
Sbjct: 374 LFNRMPFR-NTISWAGMIAGYAR 395



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 155/346 (44%), Gaps = 39/346 (11%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           DAK+   QI +     +V   N +I  Y++   +  A  LF+ MP RN++SWA +++GY 
Sbjct: 339 DAKILFDQIHEP----NVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYA 394

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G S +A    + + R G L +  +L S   AC        + G QVH L +K+   F+
Sbjct: 395 RNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNI--EALETGKQVHSLAVKAGCQFN 452

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG------------- 169
             V N LI +YG    S    R+IF+ +  +D +S+NS +S   Q               
Sbjct: 453 SYVCNALITLYGK-YRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMP 511

Query: 170 --DTISVFKLFSRMQR--------EGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQ 217
             D +S   + S   +        E FR  L   E     ++T     S  L    L QQ
Sbjct: 512 SPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQ 571

Query: 218 ILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----- 272
           I  +  K G+ S L V +ALVS + +  +   + K+F+ M ++++ + N ++ G      
Sbjct: 572 IHTIAIKLGMDSGLVVANALVSMYFKCSS-ADSLKVFDSMEERDIFTWNTIITGYAQHGL 630

Query: 273 -RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
            R+   ++  ++ +G+        GL++  +  G +D+    F+ M
Sbjct: 631 GREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSM 676



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 154/364 (42%), Gaps = 53/364 (14%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEM------------------ 46
           K  H   +K G  ++ ++CN LI +Y +   + S  ++FD M                  
Sbjct: 438 KQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQN 497

Query: 47  -------------PDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVL 93
                        P  + VSW  I+S        NEA ++F+ M+    L N   L  +L
Sbjct: 498 NLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILL 557

Query: 94  RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
                 G    + G Q+H + +K       +V+N L++MY  C  S+  + ++F+ +E R
Sbjct: 558 GLSGNLGAP--QLGQQIHTIAIKLGMDSGLVVANALVSMYFKC--SSADSLKVFDSMEER 613

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGS 212
           D+ +WN+II+ Y+Q G      +++  M   G    + PNE TF  L+ A ++S ++   
Sbjct: 614 DIFTWNTIITGYAQHGLGREAIRMYQLMVSAG----VLPNEVTFVGLLHACSHSGLVDEG 669

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK-IFEQMIQKNVVSMNGLMEG 271
           +  Q   +M    GL   L   + +V    R G+   A   I++  I+ + V  + L+  
Sbjct: 670 H--QFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGA 727

Query: 272 RRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFRFM----IGKDS 322
            +  K V  G      LF +     G    L N+Y+  G  D+   V + M    + KD 
Sbjct: 728 CKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDP 787

Query: 323 -VSW 325
             SW
Sbjct: 788 GCSW 791


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 266/673 (39%), Positives = 393/673 (58%), Gaps = 14/673 (2%)

Query: 271 GRRK----GKEVHGYLIRSGLF-DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
           G+RK    G+ +H  +  S  F +   +   ++ MY+ CG+  DSR VF  +  K+   W
Sbjct: 116 GQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQW 175

Query: 326 NTMISGLDQNGCYEEAIMNFCAM-RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           N ++S   +N  +E+A+  F  +         NF+L   + +CA L  + LGQ IHG   
Sbjct: 176 NAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMAT 235

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLK-VFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           K+ L SDV V NAL+++Y   G +   +K VF LM      SWN+++  +A +     +A
Sbjct: 236 KMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSD-PRKA 294

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           +  YL M  +G  P+  T  ++L A S       G ++H   ++  +A +  I  +LLS 
Sbjct: 295 LDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSL 354

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           Y  CG+    + +F  M E R  VSWN MI+GY  N L  +A+NL   M+  G +     
Sbjct: 355 YICCGKPFAAQVLFDGM-EHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIA 413

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
              V  AC+ ++ L  G E+H   ++A L  D+ + S+++DMY+K G I  + R FD + 
Sbjct: 414 IMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR 473

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            ++V SWN +I+GY  HG G +AL LF +M   G  PD  TF G+L ACSHAGLV++G +
Sbjct: 474 EKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLE 533

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CR 742
           +F  M  ++ + P+LE ++C+VD+LGRAG +D     I +MP  P+S IW ++L +C   
Sbjct: 534 YFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIH 593

Query: 743 ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
            N     LG K AN L E+EP+   NYVL++N++A  GKW+DV + R  MK+  ++K+AG
Sbjct: 594 GN---LGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAG 650

Query: 803 CSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKED 862
           CSW+ +   VH F+ GDE  PE + + E  + L  K+   GY P T   L DLE E K  
Sbjct: 651 CSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIG 710

Query: 863 LVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFH 921
           ++  HSEK+A++F L   +K LP+R+ KNLR+CGDCH+A KFISK+V R+IV+RD+ RFH
Sbjct: 711 ILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFH 770

Query: 922 HFNDGKCSCGDYW 934
           HF DG CSCGDYW
Sbjct: 771 HFRDGICSCGDYW 783



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 240/503 (47%), Gaps = 62/503 (12%)

Query: 88  ALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV-LIAMYGSCLESTDCARRI 146
           A+G +L+AC +      + G ++H +V  S Q  +  V N  +I MY  C   +D +R +
Sbjct: 107 AMGVLLQACGQ--RKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSD-SRMV 163

Query: 147 FEEIETRDLISWNSIISVYSQRG---DTISVF-KLFSRMQREGFRYSLKPNEYTFGSLIT 202
           F+++  ++L  WN+I+S Y++     D +S+F +L S  +        KP+ +T   +I 
Sbjct: 164 FDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEH-------KPDNFTLPCVIK 216

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA-RKIFEQMIQKN 261
           A    +  G  L Q I  M  K  L+SD++VG+AL++ + + G    A +++F+ M  K 
Sbjct: 217 ACAGLLDLG--LGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKT 274

Query: 262 VVSMNGLMEG------RRK-----------------------------------GKEVHG 280
           V S N L+ G       RK                                   G+E+HG
Sbjct: 275 VSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHG 334

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
           + +R+GL     +G  L+++Y  CG    ++ +F  M  +  VSWN MI+G  QNG  +E
Sbjct: 335 FALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDE 394

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           AI  F  M  DG+     +++    +C+ L  + LG+++H   LK  L  D+ VS++++ 
Sbjct: 395 AINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIID 454

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +YA  G +    ++F  + E D  SWN +I  +        EA++ +  M R G  P+  
Sbjct: 455 MYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYG-IHGRGKEALELFEKMLRLGLKPDDF 513

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           TF  IL A S   + + G +   Q++  +N+  +      ++   G+ G +DD  ++   
Sbjct: 514 TFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEE 573

Query: 520 MSERRDEVSWNSMISG-YIHNEL 541
           M    D   W+S++S   IH  L
Sbjct: 574 MPGDPDSRIWSSLLSSCRIHGNL 596



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 212/461 (45%), Gaps = 52/461 (11%)

Query: 16  FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFK 75
           F  D  L   +I +Y   G  + +  +FD++  +N   W  IVS YT   +  +A  +F 
Sbjct: 137 FCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFS 196

Query: 76  EMVRAG-FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
           E++       + + L  V++AC   G      G  +H +  K +   D  V N LIAMYG
Sbjct: 197 ELISVTEHKPDNFTLPCVIKAC--AGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYG 254

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
            C    +  +R+F+ ++T+ + SWN+++  Y+Q  D      L+ +M   G    L P+ 
Sbjct: 255 KCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSG----LDPDW 310

Query: 195 YTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
           +T GSL+ A   S +   +  ++I     + GL  D ++G +L+S +   G  + A+ +F
Sbjct: 311 FTIGSLLLAC--SRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLF 368

Query: 255 EQMIQKNVVSMNGLMEGR-----------------------------------------R 273
           + M  +++VS N ++ G                                          R
Sbjct: 369 DGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALR 428

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
            GKE+H + +++ L + + V + +++MYAK G I  S+ +F  +  KD  SWN +I+G  
Sbjct: 429 LGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYG 488

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GLDSDV 392
            +G  +EA+  F  M R GL   +F+    L +C+  G +  G +   + L L  ++  +
Sbjct: 489 IHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKL 548

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                ++ +   AG +   L++   MP + D   W+S++ +
Sbjct: 549 EHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSS 589



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 132/249 (53%), Gaps = 14/249 (5%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           L++G A D F+  +L+++Y+  G   +A  LFD M  R+ VSW  +++GY+  G+ +EA 
Sbjct: 337 LRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAI 396

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
            +F++M+  G      A+  V  AC +   S  + G ++HC  LK++ T D  VS+ +I 
Sbjct: 397 NLFRQMLSDGIQPYEIAIMCVCGACSQL--SALRLGKELHCFALKAHLTEDIFVSSSIID 454

Query: 132 MY--GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           MY  G C+     ++RIF+ +  +D+ SWN II+ Y   G      +LF +M R G    
Sbjct: 455 MYAKGGCI---GLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLG---- 507

Query: 190 LKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
           LKP+++TF G L+  +++ ++     L+    M+    +   L   + +V    R G   
Sbjct: 508 LKPDDFTFTGILMACSHAGLVEDG--LEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRID 565

Query: 249 YARKIFEQM 257
            A ++ E+M
Sbjct: 566 DALRLIEEM 574



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 53/97 (54%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H   LK     D+F+ +++I++Y + G +  + ++FD + +++  SW  I++GY  
Sbjct: 430 GKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGI 489

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G   EA ++F++M+R G   + +    +L AC   G
Sbjct: 490 HGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAG 526


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 270/694 (38%), Positives = 399/694 (57%), Gaps = 17/694 (2%)

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
           R  NF YA  I          S    +E  R G  +H + I  G+   + VG+ +V++Y 
Sbjct: 110 RPDNFTYAFAI----------SAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYF 159

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIS 362
           K    + +R VF  M  +D+V WNTMISG  +N  +E++I  F  M   GL   + +L +
Sbjct: 160 KFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLAT 219

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
            L++ A L    LG  I     K GL SDV V   L+SLY+  G   +   +F  + + D
Sbjct: 220 VLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPD 279

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
            +S+N++I  +  +    S AV  + ++  +G   N  T + ++     F+  +L   + 
Sbjct: 280 LISYNAMISGYTFNHETES-AVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQ 338

Query: 483 AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
              +K  +  + ++  AL + Y +  E+    ++F   S  +   SWN+MISGY  N L 
Sbjct: 339 NLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDE-SPEKSLASWNAMISGYTQNGLT 397

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
            +A++L   MM +    +  T  ++LSACA +  L  G  VH       LE +V + +AL
Sbjct: 398 DRAISLFQEMMPQLSP-NPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTAL 456

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           VDMY+KCG I  A + FDLM  +NV +WN+MI+GY  HGHG +AL LF +M   G  P  
Sbjct: 457 VDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTG 516

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFIN 722
           VTF+ +L ACSH+GLV EG + F SM+  YG  P  E ++CMVD+LGRAG+L    EFI 
Sbjct: 517 VTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIE 576

Query: 723 KMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKW 782
           +MP+ P   +W  +LGAC     + TE+   A+  LF+++P+N   YVLL+N+Y++   +
Sbjct: 577 RMPLEPGPAVWGALLGACMIH--KNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNF 634

Query: 783 EDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDA 842
              A  R+ +K+ ++ K  GC+ + + D  +VF +GD SHP+   I+E L++L  KMR+A
Sbjct: 635 PKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREA 694

Query: 843 GYVPQT-KFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSA 900
           GY  +T   AL D+E E KE +V+ HSEK+A+AF +++      IRI+KNLRVC DCH+A
Sbjct: 695 GYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTA 754

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            KFISKI  R IV+RD+NRFHHF +G CSCGDYW
Sbjct: 755 TKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 219/471 (46%), Gaps = 55/471 (11%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           L H   +  G A ++F+ + ++++Y +      A K+FD MP+R++V W  ++SG++   
Sbjct: 134 LLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNS 193

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
              ++ ++F +M+  G   +   L +VL A  E     ++ GM + CL  K     D  V
Sbjct: 194 YFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAEL--QEYRLGMGIQCLASKKGLHSDVYV 251

Query: 126 SNVLIAMYGSCLESTDCARRI-FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
              LI++Y  C +S  C  RI F++I+  DLIS+N++IS Y+   +T S   LF  +   
Sbjct: 252 LTGLISLYSKCGKS--CKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLAS 309

Query: 185 GFRYSLKPNEYTFGSLITAAYS-SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           G R     N  T   LI      + L  S L+Q    +  K G++    V +AL + + R
Sbjct: 310 GQRV----NSSTLVGLIPVYLPFNHLQLSRLIQN---LSLKIGIILQPSVSTALTTVYCR 362

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------------------------- 274
           L    +AR++F++  +K++ S N ++ G  +                             
Sbjct: 363 LNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSIL 422

Query: 275 -----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      GK VHG +    L   V V   LV+MYAKCG+I ++R +F  M+ K+ V
Sbjct: 423 SACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVV 482

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI-HGE 382
           +WN MI+G   +G  +EA+  F  M + G+  +  + +S L +C+  G +  G +I H  
Sbjct: 483 TWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSM 542

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
               G          ++ +   AG L+  L+    MP E     W +++GA
Sbjct: 543 ANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGA 593



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 133/583 (22%), Positives = 251/583 (43%), Gaps = 86/583 (14%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           Q++ HG  YD+     L + +  +G +A   +LF+++   +   +  ++ G++  G+   
Sbjct: 36  QLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKS 95

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHC----------LVLKSNQ 119
           +  ++                  LR      P  F +   +            ++L ++ 
Sbjct: 96  SIFLYTH----------------LRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHS 139

Query: 120 TFDGLVSNVLIAMYGSCL-------ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTI 172
             DG+ SN+ +   GS +          + AR++F+ +  RD + WN++IS +S+     
Sbjct: 140 IVDGVASNLFV---GSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFE 196

Query: 173 SVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLY 232
              ++F  M   G  +    +  T  +++TA   + L    L   I  +  K GL SD+Y
Sbjct: 197 DSIRVFVDMLDVGLSF----DSTTLATVLTAV--AELQEYRLGMGIQCLASKKGLHSDVY 250

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHG------------ 280
           V + L+S +++ G     R +F+Q+ Q +++S N ++ G     E               
Sbjct: 251 VLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASG 310

Query: 281 --------------YL---------------IRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
                         YL               ++ G+    +V   L  +Y +   +  +R
Sbjct: 311 QRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFAR 370

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
            +F     K   SWN MISG  QNG  + AI  F  M    L  +  ++ S LS+CA LG
Sbjct: 371 QLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLG 429

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
            + +G+ +HG      L+S+V VS AL+ +YA  G +    ++F LM + + V+WN++I 
Sbjct: 430 ALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMIT 489

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV-HAQVIKYNV 490
            +        EA+K + +M ++G  P GVTF++IL A S   +   G+++ H+    Y  
Sbjct: 490 GYG-LHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGF 548

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
              +     ++   G+ G++ +  +   RM        W +++
Sbjct: 549 QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALL 591



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/439 (25%), Positives = 200/439 (45%), Gaps = 35/439 (7%)

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
            ++ L++  +L  ++   QI  + +  G+  D+S    L   + D G ++   ++F  + 
Sbjct: 17  FLTLLNNATTLSQLL---QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVS 73

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR-AGWSPNGVTFINILAAASSFSMGKLG 478
           + D   +N +I  F+D+  L   ++  Y  +R+     P+  T+   ++AAS     ++G
Sbjct: 74  KPDLFLFNVLIRGFSDN-GLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVG 132

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
             +HA  I   VA+   + +A++  Y K    +   K+F  M E RD V WN+MISG+  
Sbjct: 133 VLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPE-RDTVLWNTMISGFSR 191

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
           N     ++ +   M+  G   D  T ATVL+A A +     GM +     +  L  DV +
Sbjct: 192 NSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYV 251

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            + L+ +YSKCG+       FD +   ++ S+N+MISGY  +   + A+TLF ++   G 
Sbjct: 252 LTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQ 311

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHF------KSMSQVYGLIPQLEQFSCMVDLLGRAG 712
             +  T VG++        V   F H       +++S   G+I Q    + +  +  R  
Sbjct: 312 RVNSSTLVGLIP-------VYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLN 364

Query: 713 ELDKIEEFINKMPITPNSLI-WRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVL 771
           E+    +  ++ P    SL  W  ++    +       L  +A ++  EM PQ + N V 
Sbjct: 365 EVQFARQLFDESP--EKSLASWNAMISGYTQNG-----LTDRAISLFQEMMPQLSPNPVT 417

Query: 772 LANMYA--------SGGKW 782
           + ++ +        S GKW
Sbjct: 418 VTSILSACAQLGALSIGKW 436


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 269/674 (39%), Positives = 402/674 (59%), Gaps = 16/674 (2%)

Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVGNG-LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
            G     ++H   +R GL       +G LV+ Y + G + ++  VF  M  +D  +WN M
Sbjct: 80  PGPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAM 139

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           +SGL +N    +A+     M  +G+     +L S L  C  LG   L   +H   +K GL
Sbjct: 140 LSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGL 199

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
             ++ V NAL+ +Y   G L+    VF  M   D V+WNS+I A  +    V+ AV+ + 
Sbjct: 200 SGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISA-NEQGGKVAAAVELFH 258

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIK--YNVANETTIENALLSCYG 505
            M  +G  P+ +T ++ LA+A +    +LG + VH  V +  ++V  +    NA++  Y 
Sbjct: 259 GMMESGVCPDVLTLVS-LASAVAQCGDELGAKSVHCYVRRRGWDVG-DIIAGNAMVDMYA 316

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM-QRGQRLDHFTF 564
           K  ++D  +K+F  + +R D VSWN++I+GY+ N L  +A+ +   M    G +    TF
Sbjct: 317 KMSKIDAAQKVFDNLPDR-DVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTF 375

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
            +VL A + +  L++GM +HA  ++  L  DV + + L+D+Y+KCG++  A   F+ MP 
Sbjct: 376 VSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPR 435

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           R+   WN++I+G   HGHG KAL+LFSQM+ +   PDHVTFV +L+ACSHAGLVD+G   
Sbjct: 436 RSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSF 495

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRA 743
           F  M  VYG++P  + ++CMVD+LGRAG+LD+  EFI  MPI P+S +W  +LGAC    
Sbjct: 496 FDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHG 555

Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
           N    E+G+ A+  LFE++P+N   YVL++NMYA  GKW+ V   R  ++   ++K  G 
Sbjct: 556 N---VEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGW 612

Query: 804 SWVTMKDGVHVFVAG--DESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKE 861
           S + +K  V VF +G   E HP+ + I   L +L  KM+ AGYVP   F L D+E + KE
Sbjct: 613 SSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKE 672

Query: 862 DLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRF 920
            +++ HSE++A+AF ++      P+ I KNLRVCGDCHSA K+ISKI  REI++RD+NRF
Sbjct: 673 QILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYISKITEREIIVRDANRF 732

Query: 921 HHFNDGKCSCGDYW 934
           HHF DG CSCGD+W
Sbjct: 733 HHFKDGHCSCGDFW 746



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 213/476 (44%), Gaps = 57/476 (11%)

Query: 4   AKLFHLQILKHGFAY-DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           A   H   L+ G  + +VF   +L++ Y+R G +A A ++FDEMP+R+  +W  ++SG  
Sbjct: 85  AAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLC 144

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
               + +A  +   MV  G   +   L SVL  C   G       M V+ +  K   + +
Sbjct: 145 RNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAV--KHGLSGE 202

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V N LI +YG     T+ A  +F  +  RDL++WNSIIS   Q G   +  +LF  M 
Sbjct: 203 LFVCNALIDVYGKLGMLTE-AHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMM 261

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYL-LQQILAMVKKAGL-LSDLYVGSALVSG 240
             G    + P+  T  SL +A       G  L  + +   V++ G  + D+  G+A+V  
Sbjct: 262 ESG----VCPDVLTLVSLASAVAQC---GDELGAKSVHCYVRRRGWDVGDIIAGNAMVDM 314

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------------------------- 272
           +A++     A+K+F+ +  ++VVS N L+ G                             
Sbjct: 315 YAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGT 374

Query: 273 --------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                         ++G  +H   I++GL   V V   L+++YAKCG + ++  +F  M 
Sbjct: 375 FVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMP 434

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            + +  WN +I+GL  +G   +A+  F  M+++ +   + + +S L++C+  G +  G+ 
Sbjct: 435 RRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRS 494

Query: 379 IHGEGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                  + G+         ++ +   AG L    +    MP + D   W +++GA
Sbjct: 495 FFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGA 550


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 280/768 (36%), Positives = 407/768 (52%), Gaps = 59/768 (7%)

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--- 271
           L Q  A +   G  +D+ + + L    + LG  YYAR IF  + + +V   N LM G   
Sbjct: 36  LAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSV 95

Query: 272 ---------------------------------------RRKGKEVHGYLIRSGLFDMVA 292
                                                   R G  +HG  I  G    + 
Sbjct: 96  NESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELL 155

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           +G+ +V MY K   ++D+R VF  M  KD++ WNTMISG  +N  Y E+I  F    RD 
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF----RDL 211

Query: 353 LMSS-----NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           +  S       +L+  L + A L  + LG QIH    K G  S   V    +SLY+  G 
Sbjct: 212 INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +     +F      D V++N++I  +  S      ++  + ++  +G      T ++++ 
Sbjct: 272 IKMASTLFREFRRPDIVAYNAMIHGYT-SNGETELSLSLFKELMLSGAKLKSSTLVSLVP 330

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
            +       L + +H   +K N  + T++  AL + Y K  E++   K+F   S  +   
Sbjct: 331 VSGHL---MLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDE-SPEKSLP 386

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           SWN+MISGY  N L   A++L   M       +  T   +LSACA +  L  G  VH   
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLV 446

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
                E  + + +AL+ MY+KCG I  A R FD MP +N  +WN+MISGY  HGHG +AL
Sbjct: 447 RSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEAL 506

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDL 707
           T+FS+M   G  P  VTF+ VL ACSHAGLV EG + F SM   YG  P ++ ++C+VD+
Sbjct: 507 TIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDI 566

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAV 767
           LGRAG L +  +FI  MPI P   +W T+LGA CR + + T L R  +  LFE++P N  
Sbjct: 567 LGRAGHLQRALQFIEAMPIQPGPSVWETLLGA-CRIH-KDTNLARTVSEKLFELDPDNVG 624

Query: 768 NYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDL 827
            +VLL+N++++   +   A  R+  K+ ++ K  G + + + +  HVF +GD+SHP+   
Sbjct: 625 YHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKA 684

Query: 828 IYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIR 886
           I+EKL++L  KMR+AGY P+T+ AL D+E E +E +V  HSE++A+AF ++       IR
Sbjct: 685 IHEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIR 744

Query: 887 IMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           I+KNLRVC DCH+A K ISKI  R IV+RD+NRFHHF DG CSCGDYW
Sbjct: 745 IIKNLRVCLDCHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 214/473 (45%), Gaps = 60/473 (12%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           + H Q +  G   ++ L + ++ +Y +   +  A K+FD MP+++++ W  ++SGY    
Sbjct: 140 VIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNE 199

Query: 66  MSNEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           M  E+ ++F++++      L+   L  +L A  E      + GMQ+H L  K+       
Sbjct: 200 MYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL--QELRLGMQIHSLATKTGCYSHDY 257

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V    I++Y  C      A  +F E    D++++N++I  Y+  G+T     LF  +   
Sbjct: 258 VLTGFISLYSKC-GKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLL-QQILAMVKKAGLLSDLYVGSALVSGFAR 243
           G     K    T  SL+       +SG  +L   I     K+  LS   V +AL + +++
Sbjct: 317 G----AKLKSSTLVSLVP------VSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSK 366

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------------------------- 274
           L     ARK+F++  +K++ S N ++ G  +                             
Sbjct: 367 LNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCI 426

Query: 275 ------------GKEVHGYLIRSGLFD-MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                       GK VH  L+RS  F+  + V   L+ MYAKCG+I ++R +F FM  K+
Sbjct: 427 LSACAQLGALSLGKWVHD-LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKN 485

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            V+WNTMISG   +G  +EA+  F  M   G+  +  + +  L +C+  G +  G +I  
Sbjct: 486 EVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFN 545

Query: 382 EGL-KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
             + + G +  V     ++ +   AG+L R L+    MP     S W +++GA
Sbjct: 546 SMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGA 598



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 127/568 (22%), Positives = 239/568 (42%), Gaps = 53/568 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H QI+ HGF  D+ L   L      +G +  A  +F  +   +   +  ++ G++     
Sbjct: 40  HAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGF---KFGMQVHCLVLKSNQTFDGL 124
           + +  +F  + ++  L       S   A      SGF   + G  +H   +      + L
Sbjct: 100 HSSLAVFAHLRKSTDL----KPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELL 155

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           + + ++ MY       D AR++F+ +  +D I WN++IS Y +    +   ++F  +  E
Sbjct: 156 LGSNIVKMYFKFWRVED-ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINE 214

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                 + +  T   ++ A   + L    L  QI ++  K G  S  YV +  +S +++ 
Sbjct: 215 S---CTRLDTTTLLDILPAV--AELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKC 269

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE--------------------------- 277
           G    A  +F +  + ++V+ N ++ G     E                           
Sbjct: 270 GKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLV 329

Query: 278 -----------VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                      +HGY ++S      +V   L  +Y+K   I+ +R +F     K   SWN
Sbjct: 330 PVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN 389

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            MISG  QNG  E+AI  F  M+      +  ++   LS+CA LG + LG+ +H      
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST 449

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
             +S + VS AL+ +YA  G ++   ++F  MP+ ++V+WN++I  +        EA+  
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYG-LHGHGQEALTI 508

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYG 505
           + +M  +G +P  VTF+ +L A S   + K G ++   +I +Y           ++   G
Sbjct: 509 FSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILG 568

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMI 533
           + G +    +    M  +     W +++
Sbjct: 569 RAGHLQRALQFIEAMPIQPGPSVWETLL 596



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 47/96 (48%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  +    F   +++   LI +Y + G +A A +LFD MP +N V+W  ++SGY   
Sbjct: 440 KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLH 499

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G   EA  +F EM+ +G          VL AC   G
Sbjct: 500 GHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAG 535


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 263/696 (37%), Positives = 400/696 (57%), Gaps = 38/696 (5%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYA--KCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
           R  K++H ++I++GL + +   + L+   A  + G I  + S+F  +   +   WN+MI 
Sbjct: 43  RTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIR 102

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           GL  +     A++ F  M   G+  ++++    L SCA L     G+QIH   LKLG  S
Sbjct: 103 GLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVS 162

Query: 391 DVSVSNALLSLYADAG-------------------------------YLSRCLKVFFLMP 419
           DV +  +L+++YA +G                               Y+ R  ++F  MP
Sbjct: 163 DVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMP 222

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             D VSWN++I  +A       EA+  + DMR+A   PN  T +++L+A +  +   LG+
Sbjct: 223 VKDVVSWNAMIAGYAQM-GRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGN 281

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
            + + +    + +   + NAL+  Y KCG++    ++F  M ER D +SWN MI GY H 
Sbjct: 282 SMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLER-DVISWNVMIGGYTHM 340

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
               +A+ L   M+  G      TF ++L +CA +  ++ G  +HA   +        + 
Sbjct: 341 CSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLS 400

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           ++L+D+Y+KCG I  A + FD M ++++ SWN+MI G A HG  DKA  LFS+M  DG  
Sbjct: 401 TSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIE 460

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           P+ +TFVG+LSAC HAGLVD G + F SM Q Y + P+ + + CM+DLLGRAG  ++ E 
Sbjct: 461 PNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAES 520

Query: 720 FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASG 779
            +  M + P+  IW ++LGA CR + R  ELG   A  LFE+EP N   YVLL+N+YA  
Sbjct: 521 LLQNMEVKPDGAIWGSLLGA-CRDHGR-VELGELVAERLFELEPDNPGAYVLLSNIYAGA 578

Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
           GKW+DVA+ R  + +  +KK  GC+ + + + VH F+ GD+ HP+ + IY  L+E+++++
Sbjct: 579 GKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQL 638

Query: 840 RDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCH 898
           +  G+V  T   L+D++ E KE  +S+HSEK+A+AF +++     PIRI+KNLRVC +CH
Sbjct: 639 KVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCH 698

Query: 899 SAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           SA K ISKI  REI+ RD NRFHHF DG CSC DYW
Sbjct: 699 SATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 142/594 (23%), Positives = 246/594 (41%), Gaps = 120/594 (20%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLI--NVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           K  H  I+K G    +F  + LI  +   R GD++ A  LF+ + + N   W  ++ G +
Sbjct: 46  KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLS 105

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                  A   F  M+ +G   N Y    +L++C +   +    G Q+H  VLK     D
Sbjct: 106 MSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASA--HEGKQIHAHVLKLGFVSD 163

Query: 123 GLVSNVLIAMYGSCLEST------------------------------DCARRIFEEIET 152
             +   LI MY    E                                D AR++F+E+  
Sbjct: 164 VFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPV 223

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSG 211
           +D++SWN++I+ Y+Q G +     LF  M++     ++ PNE T  S+++A A S+ L  
Sbjct: 224 KDVVSWNAMIAGYAQMGRSKEALLLFEDMRKA----NVPPNESTIVSVLSACAQSNALD- 278

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             L   + + ++  GL S+L + +AL+  +++ G+   AR++F+ M++++V+S N ++ G
Sbjct: 279 --LGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGG 336

Query: 272 RRK-----------------------------------------GKEVHGYLIRSGLFDM 290
                                                       GK +H Y+ ++     
Sbjct: 337 YTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVS 396

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
            ++   L+++YAKCG I  +R VF  M  K   SWN MI GL  +G  ++A   F  M  
Sbjct: 397 TSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSS 456

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
           DG+  +  + +  LS+C   G + LGQQ     ++   D  +S  +       D   L R
Sbjct: 457 DGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQ---DYKISPKSQHYGCMID--LLGR 511

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
                               G F ++E+L          ++     P+G  + ++L A  
Sbjct: 512 A-------------------GLFEEAESL----------LQNMEVKPDGAIWGSLLGACR 542

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLS-CYGKCGEMDDCEKIFARMSER 523
                +LG  V  ++ +    N       LLS  Y   G+ DD  +I  R+++R
Sbjct: 543 DHGRVELGELVAERLFELEPDNPGAY--VLLSNIYAGAGKWDDVARIRTRLNDR 594



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 199/451 (44%), Gaps = 61/451 (13%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASAS-------------------- 40
           + + K  H  +LK GF  DVF+  +LIN+Y + G++ +A                     
Sbjct: 145 AHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAG 204

Query: 41  -----------KLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYAL 89
                      +LFDEMP ++ VSW  +++GY   G S EA  +F++M +A    N   +
Sbjct: 205 YALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTI 264

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
            SVL AC +   +    G  +   +       +  + N LI MY  C +    AR +F++
Sbjct: 265 VSVLSACAQS--NALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGD-LQTARELFDD 321

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
           +  RD+ISWN +I  Y+          LF  M   G    ++P E TF S++ +   + L
Sbjct: 322 MLERDVISWNVMIGGYTHMCSYKEALALFREMLASG----VEPTEITFLSILPSC--AHL 375

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL- 268
               L + I A + K        + ++L+  +A+ GN   AR++F+ M  K++ S N + 
Sbjct: 376 GAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMI 435

Query: 269 ----MEGR-RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM-----I 318
               M G+  K  E+   +   G+        G+++     G +D  +  F  M     I
Sbjct: 436 CGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKI 495

Query: 319 GKDSVSWNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
              S  +  MI  L + G +EEA  ++    ++ DG +       S L +C   G + LG
Sbjct: 496 SPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWG-----SLLGACRDHGRVELG 550

Query: 377 QQIHGEGLKLGLDSDVSVSNALLS-LYADAG 406
           + +  E L   L+ D   +  LLS +YA AG
Sbjct: 551 ELV-AERL-FELEPDNPGAYVLLSNIYAGAG 579


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 265/719 (36%), Positives = 422/719 (58%), Gaps = 21/719 (2%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKN-----------VVSMNGLMEGRRKGKEV 278
           D+Y  ++++S +AR+G+F+ A   F + +  +           V+   G ++    G++V
Sbjct: 105 DVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLD---DGRKV 161

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H  +++ G    V +    ++ Y++ G +  + ++F  M+ +D  +WN MISG   NG  
Sbjct: 162 HCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKV 221

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
            EA+  F  MR   +   + ++ S L  C  L  I+ G  IH   +KLGL+ D+ V NAL
Sbjct: 222 AEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNAL 281

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           +++YA  G L     +F  M   D VSWNS++ AF  ++  V  A+  Y  M   G  P+
Sbjct: 282 INMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVI-ALGVYNKMHSIGVVPD 340

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYN-VANETTIENALLSCYGKCGEMDDCEKIF 517
            +T +++ + A+          +H  V +     ++  + NA++  Y K G +D   K+F
Sbjct: 341 LLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVF 400

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM-MQRGQRLDHFTFATVLSACASVAT 576
             +  + D +SWNS+I+GY  N L  +A+++   M    G   +  T+ ++L+A + +  
Sbjct: 401 EGLPVK-DVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGA 459

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           L++GM+ H   ++  L FD+ + + LVDMY KCG++  A   F  +P ++  SWN++IS 
Sbjct: 460 LKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISC 519

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           +  HG+G KA+ LF +M+ +G  PDH+TFV +LSACSH+GLVDEG   F+ M + YG+ P
Sbjct: 520 HGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRP 579

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAAN 756
            L+ + CMVDL GRAG L+K   F+  MP+ P+  +W  +LGA CR +    EL R  ++
Sbjct: 580 SLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGA-CRIH-ENVELVRTVSD 637

Query: 757 MLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV 816
            L ++E +N   YVLL+N+YA  G WE V + R   ++  +KK  G S + +   + VF 
Sbjct: 638 HLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFY 697

Query: 817 AGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF- 875
            G+++HP+ + IY +L+ L  KM+  GYVP   F L D+E + KE++++ HSE++A+AF 
Sbjct: 698 TGNQTHPKCEEIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFG 757

Query: 876 VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +++   K  ++I KNLRVCGDCH+A KFISKI  REI++RDSNRFHHF DG CSCGDYW
Sbjct: 758 IISTPPKTTLQIFKNLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 158/579 (27%), Positives = 268/579 (46%), Gaps = 66/579 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  ++  G    +FL   LIN Y  +GD+  A   FD++  ++  +W  ++S Y  
Sbjct: 59  AKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYAR 118

Query: 64  KGMSNEACKMFKEMVRAGFLL-NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            G  + A   F E +   FL  + Y    V+RAC          G +VHCLVLK     D
Sbjct: 119 IGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC-----GNLDDGRKVHCLVLKLGFECD 173

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             ++   I  Y S       A  +F+ +  RD+ +WN++IS +   G      ++F  M+
Sbjct: 174 VYIAASFIHFY-SRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMR 232

Query: 183 REGFRYSLKPNEYTFGSL--ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
            +    S+  +  T  SL  I      ++SG  +L  + A+  K GL  DL+V +AL++ 
Sbjct: 233 FK----SVSMDSVTISSLLPICVQLDDIISG--VLIHVYAI--KLGLEFDLFVCNALINM 284

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE----------------------- 277
           +A+ G    A  IF QM  +++VS N L+    + K+                       
Sbjct: 285 YAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTL 344

Query: 278 ------------------VHGYLIRSGLF-DMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                             +HG++ R   F   +A+GN +++MYAK G ID +R VF  + 
Sbjct: 345 VSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLP 404

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMR-RDGLMSSNFSLISTLSSCASLGWIMLGQ 377
            KD +SWN++I+G  QNG   EAI  + +MR   G + +  + +S L++ + LG +  G 
Sbjct: 405 VKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGM 464

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           + HG+ +K  L  D+ VS  L+ +Y   G L+  L +F+ +P    VSWN++I       
Sbjct: 465 KAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHG-LH 523

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM---GKLGHQVHAQVIKYNVANET 494
               +AVK + +M+  G  P+ +TF+++L+A S   +   G+   Q+  +   Y +    
Sbjct: 524 GYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQET--YGIRPSL 581

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
                ++  +G+ G ++        M  R D   W +++
Sbjct: 582 KHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALL 620



 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 139/494 (28%), Positives = 250/494 (50%), Gaps = 17/494 (3%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            K++H  L+ SG    + +   L+N YA  G I  +R  F  +  KD  +WN+MIS   +
Sbjct: 59  AKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYAR 118

Query: 335 NGCYEEAIMNFCA-MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            G +  A+  F   +    L S +++    + +C +L     G+++H   LKLG + DV 
Sbjct: 119 IGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLD---DGRKVHCLVLKLGFECDVY 175

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           ++ + +  Y+  G++S    +F  M   D  +WN++I  F      V+EA++ + +MR  
Sbjct: 176 IAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFY-LNGKVAEALEVFDEMRFK 234

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
             S + VT  ++L           G  +H   IK  +  +  + NAL++ Y K GE+   
Sbjct: 235 SVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSA 294

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
           E IF +M + RD VSWNS+++ +  N+    A+ +   M   G   D  T  ++ S  A 
Sbjct: 295 ETIFNQM-KVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAE 353

Query: 574 VATLERGMEVHACGVRAC-LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
           +        +H    R C    D+ +G+A++DMY+K G ID A + F+ +PV++V SWNS
Sbjct: 354 LGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNS 413

Query: 633 MISGYARHGHGDKALTLFSQMK-LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           +I+GY+++G  ++A+ ++S M+   G +P+  T+V +L+A S  G + +G K    + + 
Sbjct: 414 LITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKN 473

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE-L 750
           + L   +   +C+VD+ G+ G+L        ++P   +S+ W  ++      +C      
Sbjct: 474 F-LYFDIFVSTCLVDMYGKCGKLADALSLFYEVP-HQSSVSWNAII------SCHGLHGY 525

Query: 751 GRKAANMLFEMEPQ 764
           G KA  +  EM+ +
Sbjct: 526 GLKAVKLFKEMQSE 539



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 225/478 (47%), Gaps = 60/478 (12%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D +  H  +LK GF  DV++  + I+ Y R G ++ A  LFD M  R+  +W  ++SG+ 
Sbjct: 157 DGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFY 216

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G   EA ++F EM      ++   + S+L  C +        G+ +H   +K    FD
Sbjct: 217 LNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQL--DDIISGVLIHVYAIKLGLEFD 274

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V N LI MY    E    A  IF +++ RD++SWNS+++ + Q    +    ++++M 
Sbjct: 275 LFVCNALINMYAKFGE-LRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMH 333

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILA--MVKKAGLLSDLYVGSALVSG 240
             G    + P+  T  SL + A      G++L  + +   + ++   L D+ +G+A++  
Sbjct: 334 SIG----VVPDLLTLVSLASVAAE---LGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDM 386

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------------------------- 272
           +A+LG    ARK+FE +  K+V+S N L+ G                             
Sbjct: 387 YAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGT 446

Query: 273 --------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                         ++G + HG LI++ L+  + V   LV+MY KCG + D+ S+F  + 
Sbjct: 447 WVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVP 506

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ- 377
            + SVSWN +IS    +G   +A+  F  M+ +G+   + + +S LS+C+  G +  GQ 
Sbjct: 507 HQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQW 566

Query: 378 --QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
             Q+  E    G+   +     ++ L+  AG+L +       MP    VS W +++GA
Sbjct: 567 CFQLMQE--TYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGA 622



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 175/371 (47%), Gaps = 22/371 (5%)

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
           + L +Q+H   +  G    + +S  L++ YA  G +      F  +   D  +WNS+I A
Sbjct: 56  VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN 492
           +A      +    +   +  +    +  TF  ++ A  +   G+   +VH  V+K     
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDDGR---KVHCLVLKLGFEC 172

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
           +  I  + +  Y + G +     +F  M   RD  +WN+MISG+  N  + +A+ +   M
Sbjct: 173 DVYIAASFIHFYSRFGFVSLACNLFDNMM-IRDIGTWNAMISGFYLNGKVAEALEVFDEM 231

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRI 612
             +   +D  T +++L  C  +  +  G+ +H   ++  LEFD+ + +AL++MY+K G +
Sbjct: 232 RFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGEL 291

Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
             A   F+ M VR++ SWNS+++ + ++     AL ++++M   G +PD +T V + S  
Sbjct: 292 RSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVA 351

Query: 673 SHAGLVDEGFKHFKSMSQVYGLIPQLEQF-------SCMVDLLGRAGELDKIEEFINKMP 725
           +  G       +F S   ++G + +   F       + ++D+  + G +D   +    +P
Sbjct: 352 AELG-------NFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLP 404

Query: 726 ----ITPNSLI 732
               I+ NSLI
Sbjct: 405 VKDVISWNSLI 415


>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 298/946 (31%), Positives = 490/946 (51%), Gaps = 52/946 (5%)

Query: 5    KLFHLQILK-HGFAYDVFLCNTLINVYVR-VGDLASASKLFDEMPDRNSVSWACIVSGYT 62
            +  H +++K +   +   + N L+ +Y +    L  A KL DE+P+R   ++A ++  Y 
Sbjct: 100  RQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAALIRSYC 159

Query: 63   HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                 +E    F+ MV  G L ++Y + ++L+AC        + G  VH  V++ +   D
Sbjct: 160  RSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAM--LLXRIGKMVHGFVIRKSVESD 217

Query: 123  GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
              V N LI  Y +C +    +R +F  ++ RD++SW ++IS Y + G       +F  MQ
Sbjct: 218  VFVGNALIHFYSNCGD-LGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQ 276

Query: 183  REGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             +G    +KP+  ++ +L++  A +  +    L  + L  + + GL   +   + ++SG 
Sbjct: 277  LDG----VKPDLISWSALLSGFARNGEID---LALETLEEMPERGLQPTVNSWNGIISGC 329

Query: 242  ARLGNFYYARKIFEQMI----QKNVVSMNGLM------EGRRKGKEVHGYLIRSGLFDMV 291
             + G    A  +F +M+      N++++  ++      +  R GK +H    + G+   V
Sbjct: 330  VQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNV 389

Query: 292  AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
             V   +++MY+KCG+ D +  VF     K++  WN MI+     G  E+A+    +M++D
Sbjct: 390  YVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKD 449

Query: 352  GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
            G      +  + LS  A  G      ++  E +++GL  +V   N L+S +  +G     
Sbjct: 450  GWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEA 509

Query: 412  LKVFFLM-PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
            LKVF +M    D  + N V+                 L MR     PN +T    L A +
Sbjct: 510  LKVFRIMQSPSDGCNPNEVLN----------------LSMR-----PNPITITGALPACA 548

Query: 471  SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
              ++   G ++H   ++        + +AL+  Y KC +MD   K+F R+ + R+ VSWN
Sbjct: 549  DLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRI-DGRNTVSWN 607

Query: 531  SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
            ++++GYI+N+   +A+ L   M+  G +    TF  +  AC  +A +  G  +H    + 
Sbjct: 608  ALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKC 667

Query: 591  CL-EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
             L E    I SAL+DMY+KCG I  A   FD    ++V  WN+MIS ++ HG    A  +
Sbjct: 668  QLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAV 727

Query: 650  FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
            F QM+L G  PDH+TFV +LSAC+  GLV+EG+K+F SM   YG+   LE ++CMV +LG
Sbjct: 728  FXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILG 787

Query: 710  RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
             AG LD+  +FI +MP  P++ +W T+L A CR +    E+G +AA  LFE+EP NA NY
Sbjct: 788  GAGLLDEALDFIRQMPYPPDACMWATLLQA-CRVH-SNPEIGERAAKALFELEPDNATNY 845

Query: 770  VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIY 829
            +LL+N+Y S G W+     R  M+  ++     CS++T+      F  G+ SHPE + I 
Sbjct: 846  MLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGSHXCTFKGGESSHPELEEIL 905

Query: 830  EKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIM 888
            E    L +KM  +GY P     +FD E +  +     H+EK+A+ F +++ N   P+ + 
Sbjct: 906  ETWDXLARKMELSGYFPLD--PVFDDEEKELDPFSCLHTEKLAICFGIISSNXYRPVHVS 963

Query: 889  KNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            KN+R+C DCH++ K ISKI GREI ++D   +HH  DG C C D W
Sbjct: 964  KNIRMCIDCHTSAKLISKIDGREIFVKDVCFYHHMKDGICXCQDRW 1009


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 266/741 (35%), Positives = 405/741 (54%), Gaps = 47/741 (6%)

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE------------------- 277
           +VSG+ +  N + AR++FE M  +N VS   ++ G  +  +                   
Sbjct: 83  MVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPD 142

Query: 278 ----------------------VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                                 +H ++IR G    + V N LV+ Y K   +D +  +F 
Sbjct: 143 HITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFS 202

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M  KDSVS+N MI+G  + G  EEA+  F  MR      S F+  + L        ++ 
Sbjct: 203 EMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIF 262

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           GQQIHG  +K     D+ V+NALL  Y+   Y+     +F  MPE D VS+N +I  +A 
Sbjct: 263 GQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYA- 321

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
                 ++   +  ++   +      F  +L+ A+      +G Q HAQ +     +E  
Sbjct: 322 WNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQ 381

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           + NAL+  Y KC + +D  +IFA ++  R+ V W ++IS Y+      +A+ +   M + 
Sbjct: 382 VGNALVDMYAKCEKFEDANRIFANLA-YRNSVPWTAIISIYVQKGFHEEALKMFKEMNRE 440

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
               D  TFA+ L A A++A++  G ++H+  +R  L   V  GS LVDMY+ CG +  A
Sbjct: 441 NVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDA 500

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
              F  MP RN+  WN++IS Y+++G  +   + F+ M   G  PD V+F+ VL+ACSH 
Sbjct: 501 IEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHR 560

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           GLV++   +F SM+QVY L P+ + ++ M+D+L R+G  ++ E  I++MP  P+ ++W +
Sbjct: 561 GLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSS 620

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEP-QNAVNYVLLANMYASGGKWEDVAKARKAMKE 794
           VL + CR + +  +L +KAA+ LF+M+  ++A  YV ++N+YA  GKWE+ AK +KAM+E
Sbjct: 621 VLNS-CRIH-KNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRE 678

Query: 795 AEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFD 854
             VKK    SWV +   VHVF A D +HP+ + I  K+  L + M   GY P T   L +
Sbjct: 679 RGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQN 738

Query: 855 LEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIV 913
           ++ E K + + YHSE++A+AF L    +  PI IMKNLR C DCH+A K ISKIVGREI 
Sbjct: 739 VDEEMKIESLKYHSERLAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVISKIVGREIT 798

Query: 914 LRDSNRFHHFNDGKCSCGDYW 934
           +RDS+RFHHF DG CSCGDYW
Sbjct: 799 VRDSSRFHHFRDGSCSCGDYW 819



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 155/581 (26%), Positives = 281/581 (48%), Gaps = 69/581 (11%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N +++ YV+  +L  A +LF+ M  RN VSW  ++ GY+      EA  ++ EM R+G  
Sbjct: 81  NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVK 140

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY--GSCLESTD 141
            +     ++L    +   +  K  +Q+H  +++   +   +V N L+  Y    CL   D
Sbjct: 141 PDHITFATLLSGFDDT--TTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCL---D 195

Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
            A ++F E+ T+D +S+N +I+ Y++ G      KLF +M+   F    +P+ +TF +++
Sbjct: 196 IASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDF----QPSGFTFAAML 251

Query: 202 TAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
             +  S  V+ G    QQI  +  K   + D++V +AL+  +++      A+ +F++M +
Sbjct: 252 GMSVGSEDVIFG----QQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPE 307

Query: 260 KNVVSMNGLMEG----------------------RRK-------------------GKEV 278
            + VS N ++ G                       RK                   G++ 
Sbjct: 308 LDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQT 367

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H   + +     V VGN LV+MYAKC   +D+  +F  +  ++SV W  +IS   Q G +
Sbjct: 368 HAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFH 427

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           EEA+  F  M R+ +     +  STL + A+L  + LG+Q+H   ++LGL S V   + L
Sbjct: 428 EEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVL 487

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA---DSEALVSEAVKYYLDMRRAGW 455
           + +YA+ G +   ++VF  MP+ + V WN++I A++   D+EA  S     + DM  +G 
Sbjct: 488 VDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSS----FADMIESGL 543

Query: 456 SPNGVTFINILAAASSFSM-GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
            P+ V+F+++L A S   +  K     ++    Y +         ++    + G  ++ E
Sbjct: 544 YPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAE 603

Query: 515 KIFARMSERRDEVSWNSMI-SGYIH--NELLPKAMNLVWFM 552
            + + M    DEV W+S++ S  IH   +L  KA + ++ M
Sbjct: 604 NLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKM 644



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/474 (27%), Positives = 220/474 (46%), Gaps = 52/474 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K+    H  I++ GF+  + + N+L++ Y +   L  AS+LF EMP ++SVS+  +++GY
Sbjct: 160 KEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGY 219

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           T  G   EA K+F +M    F  + +   ++L      G     FG Q+H L +K++  +
Sbjct: 220 TKYGFREEALKLFMQMRNMDFQPSGFTFAAML--GMSVGSEDVIFGQQIHGLAIKTSYVW 277

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V+N L+  Y S  +  D A+ +F+E+   D +S+N II+ Y+  G     F LF R+
Sbjct: 278 DIFVANALLDFY-SKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRL 336

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           Q   F        + F ++++ A  ++     + +Q  A       +S++ VG+ALV  +
Sbjct: 337 QGTSF----DRKNFPFATMLSVA--AIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMY 390

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLM-----------------EGRRK---------- 274
           A+   F  A +IF  +  +N V    ++                 E  R+          
Sbjct: 391 AKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFA 450

Query: 275 --------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                         GK++H  +IR GL   V  G+ LV+MYA CG++ D+  VF+ M  +
Sbjct: 451 STLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDR 510

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           + V WN +IS   QNG  E    +F  M   GL   + S +S L++C+  G +       
Sbjct: 511 NIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYF 570

Query: 381 GEGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
               ++  LD        ++ +   +G  +    +   MP E D+V W+SV+ +
Sbjct: 571 NSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNS 624



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/375 (24%), Positives = 174/375 (46%), Gaps = 9/375 (2%)

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           + S  N ++S Y  +  L R  ++F  M   ++VSW  +IG ++ +     EA   Y +M
Sbjct: 76  NTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQ-PKEAFNLYTEM 134

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
            R+G  P+ +TF  +L+     +  K   Q+H+ +I++  +    + N+L+  Y K   +
Sbjct: 135 CRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCL 194

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
           D   ++F+ M   +D VS+N MI+GY       +A+ L   M     +   FTFA +L  
Sbjct: 195 DIASQLFSEMPT-KDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGM 253

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
                 +  G ++H   ++    +D+ + +AL+D YSK   ID A   FD MP  +  S+
Sbjct: 254 SVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSY 313

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           N +I+GYA +G  +K+  LF +++       +  F  +LS  +    +  G +   + + 
Sbjct: 314 NIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMG-RQTHAQAV 372

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
           V   + +++  + +VD+  +  + +        +    NS+ W  ++    +        
Sbjct: 373 VTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYR-NSVPWTAIISIYVQKG-----F 426

Query: 751 GRKAANMLFEMEPQN 765
             +A  M  EM  +N
Sbjct: 427 HEEALKMFKEMNREN 441



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 33/174 (18%)

Query: 608 KCGRIDYASRFFDLMPVRNV-------------------------------YSWNSMISG 636
           +  +I  A + FD MP RN                                 SW  MI G
Sbjct: 58  RANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGG 117

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           Y+++    +A  L+++M   G  PDH+TF  +LS       + E  +    + + +G   
Sbjct: 118 YSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIR-FGFSA 176

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
            L  F+ +VD   +   LD   +  ++MP T +S+ +  ++    +   R+  L
Sbjct: 177 SLIVFNSLVDSYCKTCCLDIASQLFSEMP-TKDSVSFNVMITGYTKYGFREEAL 229


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 282/785 (35%), Positives = 436/785 (55%), Gaps = 98/785 (12%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG 275
           + I A + KAGL   +++ + L++ +A+ G  Y A ++F++M  K+V S N ++ G    
Sbjct: 33  KSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSG---- 88

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
                                    YAK G ++++  VF  M   DSVSW  MI G +Q 
Sbjct: 89  -------------------------YAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQM 123

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G +E AI  F  M  D +  + F+L + L+SCA++  + +G+++H   +K GL S +SV+
Sbjct: 124 GQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVA 183

Query: 396 NALLSLYADAGYLSRCLKVFFLMP-------------------------------EHDQV 424
           N+LL++YA +G       VF  M                                E D V
Sbjct: 184 NSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVV 243

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWS-PNGVTFINILAAASSFSMGKLGHQVHA 483
           SWN++I  + +      EA+  +  M     S P+  T  + L+A ++    KLG Q+HA
Sbjct: 244 SWNAMISGY-NQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHA 302

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKI--------------------FARMSE- 522
            +I+        + NAL+S Y K G ++  +KI                    + ++ + 
Sbjct: 303 HIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDI 362

Query: 523 -----------RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
                       RD V+W +MI GY+ N     AM L   M++ G + +++T AT+LS  
Sbjct: 363 NPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVS 422

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP-VRNVYSW 630
           +S+A+L+ G ++HA   R+     V + +AL+ MY+K G I+ A   F+L+   R+  +W
Sbjct: 423 SSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITW 482

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
            SMI   A+HG G++ALTLF +M  +G  PDH+T+VGVLSAC+H GLV++G  ++  M  
Sbjct: 483 TSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQN 542

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
            + +IP    ++CM+DL GRAG L +   FI  MPI P+ + W ++L A C+ + +  EL
Sbjct: 543 AHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLL-ASCKVH-KNVEL 600

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
              AA  L  +EP+N+  Y  LAN+Y++ G+WE+ A  RK+MK+  VKK+ G SWV +K+
Sbjct: 601 AEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKN 660

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
            VH+F   D  HP++D IYE + ++ ++++  G+VP T+  L DLE E KE ++S+HSEK
Sbjct: 661 KVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEK 720

Query: 871 IAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +A+AF ++       +RIMKNLRVC DCHSA KFISK+VGREI++RD+ RFHHF +G CS
Sbjct: 721 LAIAFGLICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCS 780

Query: 930 CGDYW 934
           C DYW
Sbjct: 781 CRDYW 785



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 159/570 (27%), Positives = 269/570 (47%), Gaps = 87/570 (15%)

Query: 13  KHGFAYD------------VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           K GF YD            VF  N +++ Y + G L  A ++F+EMP+ +SVSW  ++ G
Sbjct: 60  KTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVG 119

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQ--ECGPSGFKFGMQVHCLVLKSN 118
           Y   G    A  MF+EMV       ++ L +VL +C   EC       G +VH  V+K  
Sbjct: 120 YNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVEC----LGIGRKVHSFVVKHG 175

Query: 119 QTFDGLVSNVLIAMYGSC--------------LEST----------------DCARRIFE 148
            +    V+N L+ MY                 L+ST                D A+  FE
Sbjct: 176 LSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFE 235

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
           ++  RD++SWN++IS Y+Q G       +FS+M  +    S KP+++T  S ++A  +  
Sbjct: 236 QMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDS---SSKPDKFTLASALSACAN-- 290

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN--VVSMN 266
           L    L +QI A + +    +   VG+AL+S +++ G    A+KI EQ +  N  V++  
Sbjct: 291 LENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFT 350

Query: 267 GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
            L++G                             Y K G I+ +R +F  +  +D V+W 
Sbjct: 351 ALLDG-----------------------------YVKLGDINPARRIFDSLRVRDVVAWT 381

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            MI G  QNG  ++A+  F +M ++G   +N++L + LS  +SL  +  G+QIH    + 
Sbjct: 382 AMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRS 441

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVSEAVK 445
           G  S VSVSNAL+++YA +G ++    VF L+  + D ++W S+I A A    L  EA+ 
Sbjct: 442 GNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALA-QHGLGEEALT 500

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA-LLSCY 504
            +  M   G  P+ +T++ +L+A +   + + G   +  +   +    T    A ++  +
Sbjct: 501 LFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLF 560

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           G+ G + +       M    D ++W S+++
Sbjct: 561 GRAGLLQEAHAFIENMPIEPDVIAWGSLLA 590



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 134/311 (43%), Gaps = 72/311 (23%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD----------------------- 44
           H  ++KHG +  + + N+L+N+Y + GD  +A  +FD                       
Sbjct: 168 HSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLV 227

Query: 45  --------EMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV-RAGFLLNRYALGSVLRA 95
                   +M +R+ VSW  ++SGY   G   EA  +F +M+  +    +++ L S L A
Sbjct: 228 DLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSA 287

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC------------------- 136
           C        K G Q+H  ++++     G V N LI+MY                      
Sbjct: 288 CANL--ENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLD 345

Query: 137 -------------LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
                        L   + ARRIF+ +  RD+++W ++I  Y Q G      +LF  M +
Sbjct: 346 VIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIK 405

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           EG     KPN YT  ++++ + S         +QI A   ++G  S + V +AL++ +A+
Sbjct: 406 EG----PKPNNYTLATMLSVSSSLASLDHG--RQIHASATRSGNASSVSVSNALITMYAK 459

Query: 244 LGNFYYARKIF 254
            G+   AR +F
Sbjct: 460 SGSINDARWVF 470



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 114/260 (43%), Gaps = 64/260 (24%)

Query: 478 GHQVHAQVIK--------------------------YNVANETTIE-----NALLSCYGK 506
           G  +HA++IK                          + V +E  ++     N +LS Y K
Sbjct: 32  GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
            G +++  ++F  M E  D VSW +MI GY        A+ +   M+        FT   
Sbjct: 92  GGRLEEAHRVFEEMPE-PDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTN 150

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR--------------- 611
           VL++CA+V  L  G +VH+  V+  L   + + ++L++MY+K G                
Sbjct: 151 VLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKS 210

Query: 612 ----------------IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
                           +D A   F+ M  R+V SWN+MISGY +HG   +AL +FS+M +
Sbjct: 211 TSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLM 270

Query: 656 D-GPLPDHVTFVGVLSACSH 674
           D    PD  T    LSAC++
Sbjct: 271 DSSSKPDKFTLASALSACAN 290



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 45/230 (19%)

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G  +HA  ++A L   V + + L++ Y+K G I  A R FD MPV++V+SWN ++SGYA+
Sbjct: 32  GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
            G  ++A  +F +M    P PD V++  ++   +  G  +     F+ M  V   +P   
Sbjct: 92  GGRLEEAHRVFEEM----PEPDSVSWTAMIVGYNQMGQFENAIGMFREM--VSDDVP--- 142

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
                                       P       VL +C    C    +GRK  + + 
Sbjct: 143 ----------------------------PTQFTLTNVLASCAAVEC--LGIGRKVHSFVV 172

Query: 760 EMEPQNAVNYV-LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
           +    + ++    L NMYA  G   D   A+      ++K  +  SW TM
Sbjct: 173 KHGLSSYISVANSLLNMYAKSG---DPVTAKIVFDRMKLKSTS--SWNTM 217


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 259/663 (39%), Positives = 383/663 (57%), Gaps = 12/663 (1%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYA--KCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           K++H  ++R+ LF      + +V   A    G++  +R VF  +    + + N++I G  
Sbjct: 57  KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYT 116

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
                 +AI+ +  M   GL    F+  S   SC   G +  G+Q+H    KLG  SD  
Sbjct: 117 NKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAY 173

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           + N L+++Y++ G L    KVF  M     VSW ++IGA+A  + L  EA+K +  M  A
Sbjct: 174 IQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWD-LPHEAIKLFRRMEIA 232

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
              PN +T +N+L A +     +   QVH  + +  +   T + +AL+  Y KCG     
Sbjct: 233 SVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLA 292

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
             +F +M E+ +   WN MI+G++ +    +A++L   M   G + D  T A++L AC  
Sbjct: 293 RDLFNKMPEK-NLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTH 351

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           +  LE G  +H    +  +E DV +G+ALVDMY+KCG I+ A R F  MP ++V +W ++
Sbjct: 352 LGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTAL 411

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I G A  G G KAL LF +M++    PD +TFVGVL+ACSHAGLV+EG  +F SM   YG
Sbjct: 412 IVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYG 471

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGR 752
           + P +E + CMVD+LGRAG + + E+ I  MP+ P+  +   +L AC    N    E   
Sbjct: 472 IQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAE--- 528

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
           +AA  L E++P+N   YVLL+N+Y+S   WE   K R+ M E  +KK  GCS + +   V
Sbjct: 529 RAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVV 588

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
           H FV GD SHP+   IYE L ++ ++++ AGYVP     LFD++ + KE+ +S HSEK+A
Sbjct: 589 HEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLA 648

Query: 873 VAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
           +AF +L+     PIR++KNLRVC DCHSA KFIS++  REI++RD NRFHHF  G CSC 
Sbjct: 649 IAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCR 708

Query: 932 DYW 934
           D+W
Sbjct: 709 DFW 711



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 119/481 (24%), Positives = 215/481 (44%), Gaps = 60/481 (12%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIA---MYGSCLESTDCARRIFEEIETRDLISWNSIISVY 165
           Q+H  +L++    D   ++ ++A   ++ S   S   AR +F +I      + NSII  Y
Sbjct: 58  QIHAQMLRTCLFVDPFSASKIVAFCALHDS--GSLPYARLVFNQIPNPTTFTCNSIIRGY 115

Query: 166 SQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKA 225
           + +         +  M  +G    L P+ +TF SL  +    VL      +Q+     K 
Sbjct: 116 TNKNLPRQAILFYQLMMLQG----LDPDRFTFPSLFKSC--GVLCEG---KQLHCHSTKL 166

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS--------------------- 264
           G  SD Y+ + L++ ++  G    ARK+F++M+ K+VVS                     
Sbjct: 167 GFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLF 226

Query: 265 ---------------MNGLMEGRRK-----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
                          +N L    R       K+VH Y+  +G+     + + L+++Y KC
Sbjct: 227 RRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKC 286

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G    +R +F  M  K+   WN MI+G  ++  YEEA+  F  M+  G+     ++ S L
Sbjct: 287 GCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLL 346

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +C  LG + LG+ +H    K  ++ DV++  AL+ +YA  G +   ++VF  MPE D +
Sbjct: 347 IACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVM 406

Query: 425 SWNSVIGAFAD-SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVH 482
           +W ++I   A   + L  +A++ + +M+ +   P+ +TF+ +LAA S   +   G    +
Sbjct: 407 TWTALIVGLAMCGQGL--KALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFN 464

Query: 483 AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
           +   KY +         ++   G+ G + + E +   M    D      ++S   IH  L
Sbjct: 465 SMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNL 524

Query: 542 L 542
           +
Sbjct: 525 V 525



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 204/460 (44%), Gaps = 58/460 (12%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYV--RVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           K  H Q+L+     D F  + ++        G L  A  +F+++P+  + +   I+ GYT
Sbjct: 57  KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYT 116

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
           +K +  +A   ++ M+  G   +R+   S+ ++C          G Q+HC   K     D
Sbjct: 117 NKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC-----GVLCEGKQLHCHSTKLGFASD 171

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             + N L+ MY +C      AR++F+++  + ++SW ++I  Y+Q        KLF RM+
Sbjct: 172 AYIQNTLMNMYSNC-GCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRME 230

Query: 183 REGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
                 S+KPNE T  +++TA A S  L  +   +Q+   + + G+     + SAL+  +
Sbjct: 231 IA----SVKPNEITLVNVLTACARSRDLETA---KQVHKYIDETGIGFHTVLTSALMDVY 283

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------- 274
            + G +  AR +F +M +KN+   N ++ G  +                           
Sbjct: 284 CKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMA 343

Query: 275 --------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                         GK +H Y+ +  +   VA+G  LV+MYAKCG+I+ +  VF+ M  K
Sbjct: 344 SLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEK 403

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQI 379
           D ++W  +I GL   G   +A+  F  M+   +     + +  L++C+  G +  G    
Sbjct: 404 DVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYF 463

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           +    K G+   +     ++ +   AG ++    +   MP
Sbjct: 464 NSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMP 503



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 141/269 (52%), Gaps = 9/269 (3%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H    K GFA D ++ NTL+N+Y   G L SA K+FD+M +++ VSWA ++  Y 
Sbjct: 155 EGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYA 214

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
              + +EA K+F+ M  A    N   L +VL AC        +   QVH  + ++   F 
Sbjct: 215 QWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARS--RDLETAKQVHKYIDETGIGFH 272

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            ++++ L+ +Y  C      AR +F ++  ++L  WN +I+ + +  D      LF+ MQ
Sbjct: 273 TVLTSALMDVYCKC-GCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQ 331

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             G    +K ++ T  SL+ A   + L    L + +   ++K  +  D+ +G+ALV  +A
Sbjct: 332 LSG----VKGDKVTMASLLIAC--THLGALELGKWLHVYIEKEKIEVDVALGTALVDMYA 385

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           + G+   A ++F++M +K+V++   L+ G
Sbjct: 386 KCGSIESAMRVFQEMPEKDVMTWTALIVG 414


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 267/732 (36%), Positives = 415/732 (56%), Gaps = 67/732 (9%)

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
           L+S +A+LG+  YA K+F+QM   N+ S N ++                           
Sbjct: 50  LISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSA------------------------- 84

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM-RRDGLMS 355
               Y+K G + +   +F  M  +D VSWN++ISG    G   +++  +  M + DG  +
Sbjct: 85  ----YSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFN 140

Query: 356 SNFSLISTLSSCAS-LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS----- 409
            N    STL   AS  G + LG+QIHG  +K G  S V V + L+ +Y+  G +S     
Sbjct: 141 LNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKV 200

Query: 410 --------------------RCLKV------FFLMPEHDQVSWNSVIGAFADSEALVSEA 443
                               RC +V      FF M E D +SW S+I  F  +  L  +A
Sbjct: 201 FDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN-GLDRDA 259

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           +  + +M+      +  TF ++L A       + G QVHA +I+ +  +   + +AL+  
Sbjct: 260 IDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDM 319

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           Y KC  +   E +F +M+  ++ VSW +M+ GY  N    +A+     M + G   D FT
Sbjct: 320 YCKCKNIKSAEAVFKKMT-CKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFT 378

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
             +V+S+CA++A+LE G + HA  + + L   + + +ALV +Y KCG I+ + R F+ + 
Sbjct: 379 LGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS 438

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            ++  +W +++SGYA+ G  ++ + LF  M   G  PD VTF+GVLSACS AGLV++G +
Sbjct: 439 FKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQ 498

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
            F+SM   +G++P  + ++CM+DL  RAG +++   FINKMP +P+++ W T+L +C   
Sbjct: 499 IFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFY 558

Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
                ++G+ AA  L E++P N  +YVLL+++YA+ GKWE+VA+ RK M++  ++KE GC
Sbjct: 559 G--NMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGC 616

Query: 804 SWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDL 863
           SW+  K+ VHVF A D+S+P  D IY +L++LN KM   GYVP     L D+    K  +
Sbjct: 617 SWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKM 676

Query: 864 VSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHH 922
           +++HSEK+A+AF +L     LPIR++KNLRVC DCH+A K+ISKI  REI++RD+ RFH 
Sbjct: 677 LNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTARFHL 736

Query: 923 FNDGKCSCGDYW 934
           F DG CSCGD+W
Sbjct: 737 FKDGTCSCGDFW 748



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 160/588 (27%), Positives = 286/588 (48%), Gaps = 73/588 (12%)

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           ++L+ C  C    F     +H  ++K+    +  + N LI+ Y   L S   A ++F+++
Sbjct: 14  ALLKLC--CETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAK-LGSIPYACKVFDQM 70

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE---------------GFRY------- 188
              +L SWN+I+S YS+ G    +  LF  M R                G  Y       
Sbjct: 71  PHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYN 130

Query: 189 -------SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
                  S   N  TF +L+  A  S      L +QI   V K G +S ++VGS LV  +
Sbjct: 131 LMLKNDGSFNLNRITFSTLLILA--SKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMY 188

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
           +++G    ARK+F+++ +KNVV  N L+ G          L+R                 
Sbjct: 189 SKMGMISCARKVFDELPEKNVVMYNTLIMG----------LMR----------------- 221

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
             CG ++DS+ +F  M  +DS+SW +MI+G  QNG   +AI  F  M+ + L    ++  
Sbjct: 222 --CGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFG 279

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S L++C  +  +  G+Q+H   ++     ++ V++AL+ +Y     +     VF  M   
Sbjct: 280 SVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCK 339

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           + VSW +++  +  +     EAVK + DM++ G  P+  T  +++++ ++ +  + G Q 
Sbjct: 340 NVVSWTAMLVGYGQN-GYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQF 398

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           HA+ +   + +  T+ NAL++ YGKCG ++D  ++F  +S  +DEV+W +++SGY     
Sbjct: 399 HARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS-FKDEVTWTALVSGYAQFGK 457

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI--- 598
             + + L   M+  G + D  TF  VLSAC+    +E+G ++    +    E  +V    
Sbjct: 458 ANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMIN---EHGIVPIQD 514

Query: 599 -GSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGD 644
             + ++D++S+ GRI+ A  F + MP   +  SW +++S    +G+ D
Sbjct: 515 HYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMD 562



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 215/493 (43%), Gaps = 91/493 (18%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +++  NT+++ Y ++G ++    LFD MP R+ VSW  ++SGY   G+  ++ K +  M+
Sbjct: 74  NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133

Query: 79  R--AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
           +    F LNR    ++L    + G    K G Q+H  V+K        V + L+ MY S 
Sbjct: 134 KNDGSFNLNRITFSTLLILASKRG--CVKLGRQIHGHVVKFGFMSYVFVGSPLVDMY-SK 190

Query: 137 LESTDCARRIFEEI-------------------------------ETRDLISWNSIISVY 165
           +    CAR++F+E+                                 RD ISW S+I+ +
Sbjct: 191 MGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGF 250

Query: 166 SQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ---QILAMV 222
           +Q G       +F  M+ E    +L+ ++YTFGS++TA       G   LQ   Q+ A +
Sbjct: 251 TQNGLDRDAIDIFREMKLE----NLQMDQYTFGSVLTAC-----GGVMALQEGKQVHAYI 301

Query: 223 KKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------- 272
            +     +++V SALV  + +  N   A  +F++M  KNVVS   ++ G           
Sbjct: 302 IRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAV 361

Query: 273 -------------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
                                           +G + H   + SGL   + V N LV +Y
Sbjct: 362 KTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLY 421

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
            KCG+I+DS  +F  +  KD V+W  ++SG  Q G   E I  F +M   GL     + I
Sbjct: 422 GKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFI 481

Query: 362 STLSSCASLGWIMLGQQIHGEGL-KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP- 419
             LS+C+  G +  G QI    + + G+         ++ L++ AG +         MP 
Sbjct: 482 GVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPF 541

Query: 420 EHDQVSWNSVIGA 432
             D +SW +++ +
Sbjct: 542 SPDAISWATLLSS 554



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 216/450 (48%), Gaps = 61/450 (13%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRN----------- 50
           K  +  H  ++K GF   VF+ + L+++Y ++G ++ A K+FDE+P++N           
Sbjct: 160 KLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGL 219

Query: 51  --------------------SVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
                               S+SW  +++G+T  G+  +A  +F+EM      +++Y  G
Sbjct: 220 MRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFG 279

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           SVL AC   G    + G QVH  +++++   +  V++ L+ MY  C ++   A  +F+++
Sbjct: 280 SVLTACG--GVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKC-KNIKSAEAVFKKM 336

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSSV 208
             ++++SW +++  Y Q G +    K FS MQ    +Y ++P+++T GS+I+  A  +S+
Sbjct: 337 TCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQ----KYGIEPDDFTLGSVISSCANLASL 392

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
             G+    Q  A    +GL+S + V +ALV+ + + G+   + ++F ++  K+ V+   L
Sbjct: 393 EEGA----QFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTAL 448

Query: 269 MEGRR---KGKEVHGY---LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
           + G     K  E  G    ++  GL        G+++  ++ G ++    +F  MI +  
Sbjct: 449 VSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHG 508

Query: 323 V-----SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
           +      +  MI    + G  EEA  NF  + +        S  + LSSC   G + +G+
Sbjct: 509 IVPIQDHYTCMIDLFSRAGRIEEA-RNF--INKMPFSPDAISWATLLSSCRFYGNMDIGK 565

Query: 378 QIHGEGLKLGLDSDVSVSNALL-SLYADAG 406
                   + LD   + S  LL S+YA  G
Sbjct: 566 W--AAEFLMELDPHNTASYVLLSSVYAAKG 593



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/297 (19%), Positives = 121/297 (40%), Gaps = 48/297 (16%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +  +L  C       +   +H+  ++     +  + + L+  Y+K G I YA + FD MP
Sbjct: 12  YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
             N+YSWN+++S Y++ G   +   LF  M    P  D V++  ++S  +  GL+ +  K
Sbjct: 72  HPNLYSWNTILSAYSKLGRVSEMEYLFDAM----PRRDGVSWNSLISGYAGCGLIYQSVK 127

Query: 684 HFKSM------------------------------SQVYGLIPQLEQF------SCMVDL 707
            +  M                               Q++G + +          S +VD+
Sbjct: 128 AYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDM 187

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAV 767
             + G +    +  +++P   N +++ T++    R  C + E  ++   + FEM  ++++
Sbjct: 188 YSKMGMISCARKVFDELP-EKNVVMYNTLIMGLMR--CGRVEDSKR---LFFEMRERDSI 241

Query: 768 NYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC--SWVTMKDGVHVFVAGDESH 822
           ++  +   +   G   D     + MK   ++ +     S +T   GV     G + H
Sbjct: 242 SWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVH 298


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 289/893 (32%), Positives = 472/893 (52%), Gaps = 91/893 (10%)

Query: 5    KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
            K  H  ++K GF ++ F   +LI++Y + G L  A K+FD + D ++VSW  +++GY   
Sbjct: 202  KQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQV 261

Query: 65   GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            G+  EA K+F++M + G + ++ A  +V+ AC   G                        
Sbjct: 262  GLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLG------------------------ 297

Query: 125  VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
                            D A  +F ++   ++++WN +IS + +RG  I     F  M + 
Sbjct: 298  --------------RLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKT 343

Query: 185  GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
            G    +K    T GS+++A  S       LL  + A   K GL S++YVGS+L++ +A+ 
Sbjct: 344  G----VKSTRSTLGSVLSAIASLEALNYGLL--VHAQAIKQGLNSNVYVGSSLINMYAKC 397

Query: 245  GNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------ 274
                 A+K+F+ + ++N+V  N ++ G  +                              
Sbjct: 398  EKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSIL 457

Query: 275  -----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                       G+++H ++I+      + V N LV+MYAKCG ++++R  F F+  +D+V
Sbjct: 458  SACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNV 517

Query: 324  SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
            SWN +I G  Q    +EA   F  M  DG+     SL S LS CA+L  +  G+Q+H   
Sbjct: 518  SWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFL 577

Query: 384  LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
            +K GL + +   ++L+ +Y   G +     VF  MP    VS N++I  +A ++ +  EA
Sbjct: 578  VKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLV--EA 635

Query: 444  VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT-IENALLS 502
            +  + +M+  G +P+ +TF ++L A +      LG Q+H  + K  +  +   +  +LL 
Sbjct: 636  IDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLV 695

Query: 503  CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
             Y       D + +F+     +  + W ++ISG+  N    +A+ L   M +   R D  
Sbjct: 696  MYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQA 755

Query: 563  TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
            TFA+VL AC+ +A+L  G  +H+      L+ D + GSA+VDMY+KCG +  + + F+ M
Sbjct: 756  TFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEM 815

Query: 623  PVRN-VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
              +N V SWNSMI G+A++G+ + AL +F +MK     PD VTF+GVL+ACSHAG V EG
Sbjct: 816  GSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEG 875

Query: 682  FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACC 741
             + F  M   Y ++P+L+  +CM+DLLGR G L + EEFI+K+   PN++IW T+LGA C
Sbjct: 876  REIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGA-C 934

Query: 742  RANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA 801
            R +      GR+AA  L E+EP+N+  YVLL+N+YA+ G W++V   R+AM+E  ++K  
Sbjct: 935  RIHGDDIR-GRRAAEKLIELEPENSSPYVLLSNIYAASGNWDEVNSVRRAMREKGLRKLP 993

Query: 802  GCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFD 854
            GCSW+ +    ++FVAGD+ HP    I+  LK+L   M++ GY+ +T   L D
Sbjct: 994  GCSWIVVGQKTNLFVAGDKFHPSAGEIHALLKDLIALMKEDGYIAETDSLLED 1046



 Score =  287 bits (735), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 207/751 (27%), Positives = 355/751 (47%), Gaps = 33/751 (4%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S+ +K  H Q LK GF     L + ++++Y + G++  A+K F+++  R+ ++W  ++S 
Sbjct: 97  SRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSM 156

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y+ +G   +    F  +   G   N++    VL +C          G QVHC V+K    
Sbjct: 157 YSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARL--VDIDLGKQVHCGVIKMGFE 214

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
           F+      LI MY  C    D AR+IF+ +   D +SW ++I+ Y Q G      K+F  
Sbjct: 215 FNSFCEGSLIDMYSKCGSLVD-ARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFED 273

Query: 181 MQREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           MQ+ G    L P++  F ++ITA      +     L  Q+          +++   + ++
Sbjct: 274 MQKLG----LVPDQVAFVTVITACVGLGRLDDACDLFVQMPN--------TNVVAWNVMI 321

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGL----------MEGRRKGKEVHGYLIRSGLF 288
           SG  + G    A   F+ M +  V S              +E    G  VH   I+ GL 
Sbjct: 322 SGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLN 381

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
             V VG+ L+NMYAKC  ++ ++ VF  +  ++ V WN M+ G  QNG   + +  F  M
Sbjct: 382 SNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEM 441

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           R  G     F+  S LS+CA L  + +G+Q+H   +K   + ++ V N L+ +YA  G L
Sbjct: 442 RGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGAL 501

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
               + F  +   D VSWN++I  +   E    EA   +  M   G +P+ V+  +IL+ 
Sbjct: 502 EEARQQFEFIRNRDNVSWNAIIVGYVQEED-EDEAFNMFRRMILDGIAPDEVSLASILSG 560

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
            ++    + G QVH  ++K  +       ++L+  Y KCG ++    +F+ M   R  VS
Sbjct: 561 CANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPS-RSVVS 619

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
            N++I+GY  N+L+ +A++L   M   G      TFA++L AC     L  G ++H    
Sbjct: 620 MNAIIAGYAQNDLV-EAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQ 678

Query: 589 RACLEFD-VVIGSALVDMYSKCGR-IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
           +  L +D   +G +L+ MY    R  D    F +    ++   W ++ISG+ ++G  ++A
Sbjct: 679 KRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEA 738

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           L L+ +M  +   PD  TF  VL ACS    + +G +   S+    GL       S +VD
Sbjct: 739 LQLYQEMHRNNARPDQATFASVLRACSILASLGDG-RMIHSLIFHVGLDSDELTGSAVVD 797

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
           +  + G++    +   +M    + + W +++
Sbjct: 798 MYAKCGDMKSSVQVFEEMGSKNDVISWNSMI 828



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 246/486 (50%), Gaps = 49/486 (10%)

Query: 251 RKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDS 310
           R  F++  Q+       L +  R  K +H   ++ G      +G+ +V++YAKCG ++ +
Sbjct: 83  RHPFDETPQR-------LAQASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFA 135

Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
              F  +  +D ++WN+++S   + G  E+ I  F +++  G+  + F+    LSSCA L
Sbjct: 136 AKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARL 195

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
             I LG+Q+H   +K+G + +     +L+ +Y+  G L    K+F  + + D VSW ++I
Sbjct: 196 VDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMI 255

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
             +     L  EA+K + DM++ G  P+ V F+ ++ A                      
Sbjct: 256 AGYVQV-GLPEEALKVFEDMQKLGLVPDQVAFVTVITA---------------------- 292

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
                       C G  G +DD   +F +M    + V+WN MISG++      +A++   
Sbjct: 293 ------------CVG-LGRLDDACDLFVQMP-NTNVVAWNVMISGHVKRGCDIEAIDFFK 338

Query: 551 FMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCG 610
            M + G +    T  +VLSA AS+  L  G+ VHA  ++  L  +V +GS+L++MY+KC 
Sbjct: 339 NMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCE 398

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
           +++ A + FD +  RN+  WN+M+ GYA++G+  K + LFS+M+  G  PD  T+  +LS
Sbjct: 399 KMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILS 458

Query: 671 ACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE---EFI-NKMPI 726
           AC+    ++ G +   S    +     L   + +VD+  + G L++     EFI N+  +
Sbjct: 459 ACACLECLEMG-RQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNV 517

Query: 727 TPNSLI 732
           + N++I
Sbjct: 518 SWNAII 523


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 263/747 (35%), Positives = 410/747 (54%), Gaps = 46/747 (6%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------R 272
           DL+  + L++ + +LG    AR++F++M ++N+VS   L++                  R
Sbjct: 95  DLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLR 154

Query: 273 RKGKEVHGYLIRSGLFDMVA------------------------VGNGLVNMYAKCGTID 308
            +G EV+ +++ + L   +A                        VG+GL++ Y+ C  + 
Sbjct: 155 WEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVS 214

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
           D+  VF  ++ KD+V W  M+S   +N C E A   F  MR  G   + F+L S L +  
Sbjct: 215 DAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAV 274

Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
            L  ++LG+ IHG  +K   D++  V  ALL +YA  G +      F ++P  D +  + 
Sbjct: 275 CLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSF 334

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
           +I  +A S     +A + +L + R+   PN  +  ++L A ++      G Q+H   IK 
Sbjct: 335 MISRYAQSNQ-NEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKI 393

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNL 548
              ++  + NAL+  Y KC +MD   KIF+ + +  +EVSWN+++ G+  + L  +A+++
Sbjct: 394 GHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDA-NEVSWNTIVVGFSQSGLGEEALSV 452

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
              M          T+++VL ACAS A++    ++H    ++    D VIG++L+D Y+K
Sbjct: 453 FCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAK 512

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
           CG I  A + F  +  R++ SWN++ISGYA HG    AL LF +M       + +TFV +
Sbjct: 513 CGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVAL 572

Query: 669 LSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITP 728
           LS CS  GLV+ G   F SM   +G+ P +E ++C+V LLGRAG L+   +FI  +P  P
Sbjct: 573 LSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAP 632

Query: 729 NSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKA 788
           ++++WR +L +C     +   LGR +A  + E+EPQ+   YVLL+NMYA+ G  + VA  
Sbjct: 633 SAMVWRALLSSCIIH--KNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALL 690

Query: 789 RKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQT 848
           RK+M+   V+K  G SWV +K  +H F  G   HP+  +I   L+ LN K    GY+P  
Sbjct: 691 RKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDI 750

Query: 849 KFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKI 907
              L D++ E K  ++  HSE++A+A+ L       PIRI+KNLR C DCH+AF  ISKI
Sbjct: 751 NVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKI 810

Query: 908 VGREIVLRDSNRFHHFNDGKCSCGDYW 934
           V REI++RD NRFHHF DGKCSCGDYW
Sbjct: 811 VKREIIVRDINRFHHFEDGKCSCGDYW 837



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 150/581 (25%), Positives = 269/581 (46%), Gaps = 54/581 (9%)

Query: 1   SKDAKLFHLQILKHGFA--YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIV 58
           ++  +  H  +++ G     D+F  N L+N+Y ++G LASA +LFD MP+RN VS+  +V
Sbjct: 75  ARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLV 134

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
             +  +G    A  +F+ +   G  +N++ L ++L+       +G   G  VH    K  
Sbjct: 135 QAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGG--VHSCAWKLG 192

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              +  V + LI  Y  C   +D A  +F  I  +D + W +++S YS+     + F++F
Sbjct: 193 HDHNAFVGSGLIDAYSLCSLVSD-AEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVF 251

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           S+M+  G     KPN +   S++ AA    L    L + I     K    ++ +VG AL+
Sbjct: 252 SKMRVSG----CKPNPFALTSVLKAAV--CLPSVVLGKGIHGCAIKTLNDTEPHVGGALL 305

Query: 239 SGFARLGNFYYARKIFEQMIQKNVV----------------------------------- 263
             +A+ G+   AR  FE +   +V+                                   
Sbjct: 306 DMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEY 365

Query: 264 SMNGLMEGRRK------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
           S++ +++          GK++H + I+ G    + VGN L++ YAKC  +D S  +F  +
Sbjct: 366 SLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 425

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
              + VSWNT++ G  Q+G  EEA+  FC M+   +  +  +  S L +CAS   I    
Sbjct: 426 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG 485

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           QIH    K   ++D  + N+L+  YA  GY+   LKVF  + E D +SWN++I  +A   
Sbjct: 486 QIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYA-LH 544

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-IKYNVANETTI 496
              ++A++ +  M ++    N +TF+ +L+  SS  +   G  +   + I + +      
Sbjct: 545 GQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEH 604

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI 537
              ++   G+ G ++D  +    +      + W +++S  I
Sbjct: 605 YTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCI 645


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 273/785 (34%), Positives = 430/785 (54%), Gaps = 92/785 (11%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG 275
           + I A   KAGLL+  Y+ + L+S        YY          +      GL + RR  
Sbjct: 46  RAIHARAVKAGLLASAYLCNNLLS--------YYG---------ETAGGAGGLRDARRLF 88

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
            E+   L R  +F      N L++M+AK G + D+R VF  M  +D+VSW  M+ GL++ 
Sbjct: 89  DEIP--LARRNVF----TWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRA 142

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G + EAI     M  DG   + F+L + LSSCA      +G+++H   +KLGL S V V+
Sbjct: 143 GRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVA 202

Query: 396 NALLSLYADAG----------------------------YLSR---CLKVFFLMPEHDQV 424
           N++L++Y   G                            +L R      +F  MP+   V
Sbjct: 203 NSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIV 262

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDM-RRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           SWN++I  + +   L ++A+K +  M   +  +P+  T  ++L+A ++    ++G QVHA
Sbjct: 263 SWNAMIAGY-NQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHA 321

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE--------------------- 522
            +++  +A  + + NAL+S Y K G +++  +I  +  E                     
Sbjct: 322 YILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDM 381

Query: 523 -----------RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
                       RD V+W +MI GY  N    +A++L   M+  G   + +T A VLS C
Sbjct: 382 ESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVC 441

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN-VYSW 630
           AS+A L+ G ++H   +R+ LE    + +A++ MY++ G   +A R FD +  R    +W
Sbjct: 442 ASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITW 501

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
            SMI   A+HG G++A+ LF +M   G  PD +T+VGVLSACSHAG V+EG +++  +  
Sbjct: 502 TSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKN 561

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
            + + P++  ++CMVDLL RAG   + +EFI +MP+ P+++ W ++L A CR + +  EL
Sbjct: 562 EHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSA-CRVH-KNAEL 619

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
              AA  L  ++P N+  Y  +AN+Y++ G+W D A+  KA KE  V+KE G SW  ++ 
Sbjct: 620 AELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRS 679

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
            +HVF A D  HP++D +Y     + ++++ AG+VP  +  L D++ E KE+L+S HSEK
Sbjct: 680 KIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEK 739

Query: 871 IAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +A+AF +++   K  +R+MKNLRVC DCH+A K ISK+  REI++RD+ RFHHF DG CS
Sbjct: 740 LAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCS 799

Query: 930 CGDYW 934
           C DYW
Sbjct: 800 CKDYW 804



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 155/551 (28%), Positives = 267/551 (48%), Gaps = 71/551 (12%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +VF  N+L++++ + G LA A  +F EMP+R++VSW  +V G    G   EA K   +M 
Sbjct: 97  NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             GF   ++ L +VL +C          G +VH  V+K        V+N ++ MYG C +
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGA--VGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGD 214

Query: 139 ST------------------------------DCARRIFEEIETRDLISWNSIISVYSQR 168
           S                               D A  +FE +  R ++SWN++I+ Y+Q 
Sbjct: 215 SETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQN 274

Query: 169 GDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL 228
           G      KLFSRM  E    S+ P+E+T  S+++A  +  L    + +Q+ A + +  + 
Sbjct: 275 GLDAKALKLFSRMLHES---SMAPDEFTITSVLSACAN--LGNVRIGKQVHAYILRTEMA 329

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQK--NVVSMNGLMEGRRKGKEVHGYLIRSG 286
            +  V +AL+S +A+ G+   AR+I +Q ++   NV+S   L+EG               
Sbjct: 330 YNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEG--------------- 374

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
                         Y K G ++ +R +F  M  +D V+W  MI G +QNG  +EAI  F 
Sbjct: 375 --------------YVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFR 420

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
           +M   G   ++++L + LS CASL  +  G+QIH   ++  L+   SVSNA++++YA +G
Sbjct: 421 SMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSG 480

Query: 407 YLSRCLKVF-FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
                 ++F  +    + ++W S+I A A       EAV  + +M RAG  P+ +T++ +
Sbjct: 481 SFPWARRMFDQVCWRKETITWTSMIVALAQ-HGQGEEAVGLFEEMLRAGVEPDRITYVGV 539

Query: 466 LAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           L+A S       G + + Q+  ++ +A E +    ++    + G   + ++   RM    
Sbjct: 540 LSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEP 599

Query: 525 DEVSWNSMISG 535
           D ++W S++S 
Sbjct: 600 DAIAWGSLLSA 610



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 137/623 (21%), Positives = 274/623 (43%), Gaps = 102/623 (16%)

Query: 92  VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC---ARRIFE 148
           +L+ CQ     G   G  +H   +K+       + N L++ YG           ARR+F+
Sbjct: 32  LLQLCQTAANPGA--GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFD 89

Query: 149 EIE--TRDLISWNSIISVYSQRGDTISVFKLFSRM-QREGFRYSL--------------- 190
           EI    R++ +WNS++S++++ G       +F+ M +R+   +++               
Sbjct: 90  EIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAI 149

Query: 191 -----------KPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
                       P ++T  +++++   +V     + +++ + V K GL S + V +++++
Sbjct: 150 KTLLDMTADGFTPTQFTLTNVLSSC--AVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLN 207

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVN 299
            + + G+   A  +FE+M  ++V S                              N +V+
Sbjct: 208 MYGKCGDSETATTVFERMPVRSVSSW-----------------------------NAMVS 238

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN-F 358
           +    G +D + S+F  M  +  VSWN MI+G +QNG   +A+  F  M  +  M+ + F
Sbjct: 239 LNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEF 298

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV---- 414
           ++ S LS+CA+LG + +G+Q+H   L+  +  +  V+NAL+S YA +G +    ++    
Sbjct: 299 TITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQS 358

Query: 415 -----------------------------FFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
                                        F +M   D V+W ++I  + +      EA+ 
Sbjct: 359 METDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY-EQNGRNDEAID 417

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            +  M   G  PN  T   +L+  +S +    G Q+H + I+  +   +++ NA+++ Y 
Sbjct: 418 LFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYA 477

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           + G      ++F ++  R++ ++W SMI     +    +A+ L   M++ G   D  T+ 
Sbjct: 478 RSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYV 537

Query: 566 TVLSACASVATLERGMEVH-ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
            VLSAC+    +  G   +        +  ++   + +VD+ ++ G    A  F   MPV
Sbjct: 538 GVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPV 597

Query: 625 R-NVYSWNSMISGYARHGHGDKA 646
             +  +W S++S    H + + A
Sbjct: 598 EPDAIAWGSLLSACRVHKNAELA 620



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 198/467 (42%), Gaps = 107/467 (22%)

Query: 376 GQQIHGEGLKLGL-------------------------------------DSDVSVSNAL 398
           G+ IH   +K GL                                       +V   N+L
Sbjct: 45  GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSL 104

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           LS++A +G L+    VF  MPE D VSW  ++    +      EA+K  LDM   G++P 
Sbjct: 105 LSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGL-NRAGRFGEAIKTLLDMTADGFTPT 163

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
             T  N+L++ +    G +G +VH+ V+K  + +   + N++L+ YGKCG+ +    +F 
Sbjct: 164 QFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFE 223

Query: 519 RMSER------------------------------RDEVSWNSMISGYIHNELLPKAMNL 548
           RM  R                              R  VSWN+MI+GY  N L  KA+ L
Sbjct: 224 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKL 283

Query: 549 VWFMMQRGQRL-DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
              M+       D FT  +VLSACA++  +  G +VHA  +R  + ++  + +AL+  Y+
Sbjct: 284 FSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYA 343

Query: 608 KCGRIDYASRFFD---------------------------------LMPVRNVYSWNSMI 634
           K G ++ A R  D                                 +M  R+V +W +MI
Sbjct: 344 KSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMI 403

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYG 693
            GY ++G  D+A+ LF  M   GP P+  T   VLS C+    +D G + H ++   +  
Sbjct: 404 VGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRA---IRS 460

Query: 694 LIPQLEQFS-CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           L+ Q    S  ++ +  R+G         +++     ++ W +++ A
Sbjct: 461 LLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVA 507



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 97/437 (22%), Positives = 185/437 (42%), Gaps = 89/437 (20%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVS-------- 59
           H  ++K G    V + N+++N+Y + GD  +A+ +F+ MP R+  SW  +VS        
Sbjct: 187 HSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRM 246

Query: 60  -----------------------GYTHKGMSNEACKMFKEMV-RAGFLLNRYALGSVLRA 95
                                  GY   G+  +A K+F  M+  +    + + + SVL A
Sbjct: 247 DLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSA 306

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE------ 149
           C   G    + G QVH  +L++   ++  V+N LI+ Y     S + ARRI ++      
Sbjct: 307 CANLG--NVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS-GSVENARRIMDQSMETDL 363

Query: 150 ---------------------------IETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
                                      +  RD+++W ++I  Y Q G       LF  M 
Sbjct: 364 NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI 423

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             G     +PN YT  ++++   S  L+     +QI     ++ L     V +A+++ +A
Sbjct: 424 TCG----PEPNSYTLAAVLSVCAS--LACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYA 477

Query: 243 RLGNFYYARKIFEQMI-QKNVVSMNGL---MEGRRKGKEVHGY---LIRSGLFDMVAVGN 295
           R G+F +AR++F+Q+  +K  ++   +   +    +G+E  G    ++R+G+        
Sbjct: 478 RSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYV 537

Query: 296 GLVNMYAKCGTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           G+++  +  G +++ +  +        I  +   +  M+  L + G + EA   F  +RR
Sbjct: 538 GVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEA-QEF--IRR 594

Query: 351 DGLMSSNFSLISTLSSC 367
             +     +  S LS+C
Sbjct: 595 MPVEPDAIAWGSLLSAC 611



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 16/167 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRN-SVSWACIVSGYTH 63
           K  H + ++        + N +I +Y R G    A ++FD++  R  +++W  ++     
Sbjct: 451 KQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQ 510

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKFGMQVHCLVLKSNQTF 121
            G   EA  +F+EM+RAG   +R     VL AC   G    G ++  Q+     K+    
Sbjct: 511 HGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQI-----KNEHQI 565

Query: 122 DGLVSNV-----LIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS 163
              +S+      L+A  G   E+ +  RR+  E    D I+W S++S
Sbjct: 566 APEMSHYACMVDLLARAGLFSEAQEFIRRMPVE---PDAIAWGSLLS 609


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 289/824 (35%), Positives = 436/824 (52%), Gaps = 91/824 (11%)

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           ++L P   +  +L +      + G+ L + +L     A       V +AL++ +AR G+ 
Sbjct: 60  FALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPA-------VANALLTAYARCGDL 112

Query: 248 YYARKIFEQMIQKNVVSMNGLM-------------------------------------- 269
             A  +F  M  ++ V+ N L+                                      
Sbjct: 113 TAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLAC 172

Query: 270 ----EGRRKGKEVHGYLIRSGLFDMVA--VGNGLVNMYAKCGTIDDSRSVFRFMIGKDS- 322
               E  R G+E H + +++G  D       N L++MYA+ G +DD++ +F  +   DS 
Sbjct: 173 SHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSP 232

Query: 323 ----VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
               V+WNTM+S L Q+G   EAI     M   G+     +  S L +C+ L  + LG++
Sbjct: 233 GGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGRE 292

Query: 379 IHGEGLKLGLDSDVS----VSNALLSLYADAGYLSRCLKVFFLMPE-HDQVS-WNSVIGA 432
           +H   LK   DSD++    V++AL+ +YA    +    +VF ++P  H Q+  WN+++  
Sbjct: 293 MHAYVLK---DSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCG 349

Query: 433 FADSEALVSEAVKYYLDMR-RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA 491
           +A +  +  EA++ +  M   AG  P+  T   +L A +          VH  V+K  +A
Sbjct: 350 YAQA-GMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMA 408

Query: 492 NETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWF 551
           +   ++NAL+  Y + G+M+    IFA + E RD VSWN++I+G +    +  A  LV  
Sbjct: 409 DNPFVQNALMDLYARLGDMEAARWIFAAI-EPRDVVSWNTLITGCVVQGHIHDAFQLVRE 467

Query: 552 MMQRGQRLD------------------HFTFATVLSACASVATLERGMEVHACGVRACLE 593
           M Q+G+  D                  + T  T+L  CA +A   +G E+H   +R  L+
Sbjct: 468 MQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALD 527

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
            D+ +GSALVDMY+KCG +  +   FD +P RNV +WN +I  Y  HG GD+A+ LF +M
Sbjct: 528 SDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRM 587

Query: 654 KLDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG 712
            +     P+ VTF+  L+ACSH+G+VD G + F SM + +G+ P  +  +C VD+LGRAG
Sbjct: 588 VMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAG 647

Query: 713 ELDKIEEFINKM-PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVL 771
            LD+    I  M P       W + LGAC R + R   LG  AA  LF++EP  A +YVL
Sbjct: 648 RLDEAYSIITSMEPGEQQVSAWSSFLGAC-RLH-RNVPLGEIAAERLFQLEPDEASHYVL 705

Query: 772 LANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEK 831
           L N+Y++ G WE  ++ R  M++  V KE GCSW+ +   +H F+AG+ +HPE  L++  
Sbjct: 706 LCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAH 765

Query: 832 LKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKN 890
           +  L ++MR+ GY P T   L D+E   K  ++ YHSEK+A+AF L R      IR+ KN
Sbjct: 766 MDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGLLRTPPGATIRVAKN 825

Query: 891 LRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           LRVC DCH A KFIS++VGREIVLRD  RFHHF DG CSCGDYW
Sbjct: 826 LRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSCGDYW 869



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 161/596 (27%), Positives = 269/596 (45%), Gaps = 86/596 (14%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           L HGF   V   N L+  Y R GDL +A  LF+ MP R++V++  +++          A 
Sbjct: 90  LLHGFTPAV--ANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPAL 147

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG---LVSNV 128
              ++M+  G  L+ + L SVL AC        + G + H   LK N   DG      N 
Sbjct: 148 DALRDMLLEGHPLSSFTLVSVLLACSHLA-EDLRLGREAHAFALK-NGFLDGDERFAFNA 205

Query: 129 LIAMYGSCLESTDCARRIFEEIETRD-----LISWNSIISVYSQRGDTISVFKLFSRMQR 183
           L++MY   L   D A+ +F  ++T D     +++WN+++S+  Q G      ++   M  
Sbjct: 206 LLSMYAR-LGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVA 264

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMV-KKAGLLSDLYVGSALVSGFA 242
            G R    P+  TF S + A   S L    L +++ A V K + L ++ +V SALV  +A
Sbjct: 265 RGVR----PDGITFASALPAC--SQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYA 318

Query: 243 RLGNFYYARKIFEQM---------------------IQKNVVSMNGLMEGRR-------- 273
                  AR++F+ +                     + +  + +   ME           
Sbjct: 319 SHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETT 378

Query: 274 --------------KGKE-VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                          GKE VHGY+++ G+ D   V N L+++YA+ G ++ +R +F  + 
Sbjct: 379 IAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIE 438

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG------------------LMSSNFSL 360
            +D VSWNT+I+G    G   +A      M++ G                  ++ +N +L
Sbjct: 439 PRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTL 498

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           ++ L  CA L     G++IHG  ++  LDSD++V +AL+ +YA  G L+    VF  +P+
Sbjct: 499 MTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPK 558

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS-PNGVTFINILAAASSFSMGKLGH 479
            + ++WN +I A+     L  EA+  +  M  +  + PN VTFI  LAA S   M   G 
Sbjct: 559 RNVITWNVLIMAYG-MHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGM 617

Query: 480 QV-HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS-WNSMI 533
           ++ H+    + V     +    +   G+ G +D+   I   M     +VS W+S +
Sbjct: 618 ELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFL 673



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 206/406 (50%), Gaps = 34/406 (8%)

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGL--DSDVSVSNALLSLYADAGYLSRCLKV 414
           +F+L     S A+L  ++  + IHG  L+  L      +V+NALL+ YA  G L+  L +
Sbjct: 59  HFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALAL 118

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  MP  D V++NS+I A       +  A+    DM   G   +  T +++L A S  + 
Sbjct: 119 FNAMPSRDAVTFNSLIAALCLFRRWLP-ALDALRDMLLEGHPLSSFTLVSVLLACSHLAE 177

Query: 475 G-KLGHQVHAQVIKYNV--ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE----V 527
             +LG + HA  +K      +E    NALLS Y + G +DD + +F  +          V
Sbjct: 178 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVV 237

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           +WN+M+S  + +    +A+ +++ M+ RG R D  TFA+ L AC+ +  L  G E+HA  
Sbjct: 238 TWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYV 297

Query: 588 VR-ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP--VRNVYSWNSMISGYARHGHGD 644
           ++ + L  +  + SALVDMY+   R+  A R FD++P   R +  WN+M+ GYA+ G  +
Sbjct: 298 LKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDE 357

Query: 645 KALTLFSQMKLD-GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI-------- 695
           +AL LF++M+ + G +P   T  GVL AC+ +       + F     V+G +        
Sbjct: 358 EALELFARMEAEAGVVPSETTIAGVLPACARS-------ETFAGKEAVHGYVLKRGMADN 410

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI-WRTVLGAC 740
           P ++  + ++DL  R G+++          I P  ++ W T++  C
Sbjct: 411 PFVQ--NALMDLYARLGDMEAARWIFAA--IEPRDVVSWNTLITGC 452



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 24/214 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +LK G A + F+ N L+++Y R+GD+ +A  +F  +  R+ VSW  +++G   +G  
Sbjct: 399 HGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHI 458

Query: 68  NEACKMFKEMVRAG------------------FLLNRYALGSVLRACQECGPSGFKFGMQ 109
           ++A ++ +EM + G                   + N   L ++L  C          G +
Sbjct: 459 HDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPA--KGKE 516

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
           +H   ++     D  V + L+ MY  C      +R +F+ +  R++I+WN +I  Y   G
Sbjct: 517 IHGYAMRHALDSDIAVGSALVDMYAKC-GCLALSRAVFDRLPKRNVITWNVLIMAYGMHG 575

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
                  LF RM         KPNE TF + + A
Sbjct: 576 LGDEAIALFDRMV---MSNEAKPNEVTFIAALAA 606



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 108/277 (38%), Gaps = 50/277 (18%)

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACL--EFDVVIGSALVDMYSKCGRIDYAS 616
           LDHF       + A++ +L     +H   +R  L   F   + +AL+  Y++CG +  A 
Sbjct: 57  LDHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAAL 116

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH-- 674
             F+ MP R+  ++NS+I+          AL     M L+G      T V VL ACSH  
Sbjct: 117 ALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLA 176

Query: 675 ------------------------------------AGLVDEGFKHFKSMSQVYGLIPQL 698
                                                GLVD+    F S+         +
Sbjct: 177 EDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGV 236

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKM---PITPNSLIWRTVLGACCRANCRKTELGRKAA 755
             ++ MV LL ++G   +  E I  M    + P+ + + + L AC  +      LGR+  
Sbjct: 237 VTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPAC--SQLEMLSLGREMH 294

Query: 756 NMLFEMEPQNAVNYV--LLANMYASGGKWEDVAKARK 790
             + +     A ++V   L +MYAS    E V  AR+
Sbjct: 295 AYVLKDSDLAANSFVASALVDMYAS---HERVGVARR 328



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   ++H    D+ + + L+++Y + G LA +  +FD +P RN ++W  ++  Y   
Sbjct: 515 KEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMH 574

Query: 65  GMSNEACKMFKEMVRAGFL-LNRYALGSVLRACQECG 100
           G+ +EA  +F  MV +     N     + L AC   G
Sbjct: 575 GLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSG 611


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 276/701 (39%), Positives = 401/701 (57%), Gaps = 44/701 (6%)

Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVG---NGLVNMYAKCGTIDDSRSVFRFMI------GK 320
           +GRR G+E H + ++ G  D        N L++MYA+ G +DD++S+FR         G 
Sbjct: 186 DGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGG 245

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D V+WNTMIS L Q G   EA+     M   G+     +  S L +C+ L  + LG+++H
Sbjct: 246 DVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMH 305

Query: 381 GEGLKLGLDSDVS----VSNALLSLYADAGYLSRCLKVFFLMPEHDQV--SWNSVIGAFA 434
              LK   D+D++    V++AL+ +YA    ++   +VF ++PE  +    WN++I  +A
Sbjct: 306 AVVLK---DADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYA 362

Query: 435 DSEALVSEAVKYYLDMR-RAGWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVAN 492
            +  +  EA++ +  M   AG +P+  T   +L A +  S G  G + +H  V+K  +A 
Sbjct: 363 QA-GMDEEALELFSRMEAEAGCAPSETTMSGVLPACAR-SEGFAGKEAMHGYVVKRGMAG 420

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
              ++NAL+  Y + GEMD   +IFA M + RD VSWN++I+G +      +A  LV  M
Sbjct: 421 NRFVQNALMDMYARLGEMDVARRIFA-MIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEM 479

Query: 553 M------------QRGQR----LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
                        + G+      ++ T  T+L  CA++A   RG E+H   VR  LE D+
Sbjct: 480 QLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDI 539

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
            +GSALVDMY+KCG +  +   FD +P RNV +WN +I  Y  HG GD+A+ LF +M   
Sbjct: 540 AVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAG 599

Query: 657 G-PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD 715
           G   P+ VTF+  L+ACSH+GLVD G + F  M + +G+ P  +  +C+VD+LGRAG LD
Sbjct: 600 GEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLD 659

Query: 716 KIEEFINKM-PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
           +    I  M P       W ++LGAC R + R  ELG  AA  LFE+EP  A +YVLL N
Sbjct: 660 EAYSIITSMEPGEQQVSAWSSLLGAC-RLH-RNVELGEVAAERLFELEPGEASHYVLLCN 717

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           +Y++ G W+     R  M+   V KE GCSW+ +   +H F+AG+ SHP    ++  +  
Sbjct: 718 IYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDA 777

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRV 893
           L ++MR  GY P T   L D++ + K  ++ YHSEK+A+AF L R      IR+ KNLRV
Sbjct: 778 LWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIRVAKNLRV 837

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           C DCH A KF+SK+VGR+IVLRD  RFHHF DG CSCGDYW
Sbjct: 838 CNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSCSCGDYW 878



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 158/587 (26%), Positives = 263/587 (44%), Gaps = 85/587 (14%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVSGYTHKGMSNEACKMFKEMVRAG 81
           N L+  Y R GDL +A  LF       R++VS+  ++S          A    ++M+  G
Sbjct: 104 NALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEG 163

Query: 82  -FLLNRYALGSVLRACQEC-GPSGFKFGMQVHCLVLKSNQTFDG---LVSNVLIAMYGSC 136
              ++ + L SVL AC    G  G + G + H   LK     +G      N L++MY   
Sbjct: 164 RHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYAR- 222

Query: 137 LESTDCARRIFEEIETR------DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSL 190
           L   D A+ +F            D+++WN++IS+  Q G      ++   M   G R   
Sbjct: 223 LGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVR--- 279

Query: 191 KPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK----------AGLLSDLYVG------ 234
            P+  TF S + A   S L    L +++ A+V K          A  L D+Y G      
Sbjct: 280 -PDGVTFASALPA--CSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVAS 336

Query: 235 ------------------SALVSGFARLGNFYYARKIFEQM-----IQKNVVSMNGLM-- 269
                             +A++ G+A+ G    A ++F +M        +  +M+G++  
Sbjct: 337 ARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPA 396

Query: 270 ----EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
               EG    + +HGY+++ G+     V N L++MYA+ G +D +R +F  +  +D VSW
Sbjct: 397 CARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSW 456

Query: 326 NTMISGLDQNGCYEEAIMNFCAMR------------RDG----LMSSNFSLISTLSSCAS 369
           NT+I+G    G   EA      M+             +G     M +N +L++ L  CA+
Sbjct: 457 NTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAA 516

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           L     G++IHG  ++  L+SD++V +AL+ +YA  G L+    VF  +P  + ++WN +
Sbjct: 517 LAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVL 576

Query: 430 IGAFADSEALVSEAVKYYLDMRRAG-WSPNGVTFINILAAASSFSMGKLGHQV-HAQVIK 487
           I A+     L  EAV  + +M   G  +PN VTFI  LAA S   +   G ++ H     
Sbjct: 577 IMAYG-MHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERD 635

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS-WNSMI 533
           + V     +   ++   G+ G +D+   I   M     +VS W+S++
Sbjct: 636 HGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLL 682



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 236/498 (47%), Gaps = 39/498 (7%)

Query: 278 VHGYLIRSGLF--DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG--KDSVSWNTMISGLD 333
           +H   +R  L      AVGN L+  YA+CG +D + ++F       +D+VS+N++IS L 
Sbjct: 85  LHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALC 144

Query: 334 QNGCYEEAIMNFCAMRRDGLMS-SNFSLISTLSSCASLG---WIMLGQQIHGEGLKLG-L 388
               +E A+     M  +G    S+F+L+S L +C+ L       LG++ H   LK G L
Sbjct: 145 LFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFL 204

Query: 389 DS--DVSVSNALLSLYA------DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
           D   +    NALLS+YA      DA  L R     F     D V+WN++I          
Sbjct: 205 DEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQG-GRC 263

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENA 499
           +EAV+   DM   G  P+GVTF + L A S   M  LG ++HA V+K  ++A  + + +A
Sbjct: 264 AEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASA 323

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVS-WNSMISGYIHNELLPKAMNLVWFM-MQRGQ 557
           L+  Y    ++    ++F  + E   ++  WN+MI GY    +  +A+ L   M  + G 
Sbjct: 324 LVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGC 383

Query: 558 RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
                T + VL ACA          +H   V+  +  +  + +AL+DMY++ G +D A R
Sbjct: 384 APSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARR 443

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL------------DGP----LPD 661
            F ++  R+V SWN++I+G    GH  +A  L ++M+L            +G     +P+
Sbjct: 444 IFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPN 503

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
           ++T + +L  C+       G K     +  + L   +   S +VD+  + G L       
Sbjct: 504 NITLMTLLPGCAALAAPARG-KEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVF 562

Query: 722 NKMPITPNSLIWRTVLGA 739
           +++P   N + W  ++ A
Sbjct: 563 DRLP-RRNVITWNVLIMA 579



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 131/277 (47%), Gaps = 22/277 (7%)

Query: 8   HLQILKHGF---AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNS------VSWACIV 58
           H   LK GF     + F  N L+++Y R+G +  A  LF       S      V+W  ++
Sbjct: 195 HAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMI 254

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLK-S 117
           S     G   EA ++  +MV  G   +     S L AC          G ++H +VLK +
Sbjct: 255 SLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRL--EMLALGREMHAVVLKDA 312

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE--TRDLISWNSIISVYSQRGDTISVF 175
           +   +  V++ L+ MY    E    ARR+F+ +   +R L  WN++I  Y+Q G      
Sbjct: 313 DLAANSFVASALVDMYAGN-EKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEAL 371

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVG 234
           +LFSRM+ E       P+E T   ++ A A S   +G    + +   V K G+  + +V 
Sbjct: 372 ELFSRMEAEA---GCAPSETTMSGVLPACARSEGFAGK---EAMHGYVVKRGMAGNRFVQ 425

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           +AL+  +ARLG    AR+IF  +  ++VVS N L+ G
Sbjct: 426 NALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITG 462



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 151/365 (41%), Gaps = 37/365 (10%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  ++K G A + F+ N L+++Y R+G++  A ++F  +  R+ VSW  +++G   +G 
Sbjct: 409 MHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGH 468

Query: 67  SNEACKMFKEMVRAGF----------------LLNRYALGSVLRACQECGPSGFKFGMQV 110
           + EA ++  EM                     + N   L ++L  C          G ++
Sbjct: 469 AAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPA--RGKEI 526

Query: 111 HCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD 170
           H   ++     D  V + L+ MY  C      +R +F+ +  R++I+WN +I  Y   G 
Sbjct: 527 HGYAVRHALESDIAVGSALVDMYAKC-GCLAASRAVFDRLPRRNVITWNVLIMAYGMHGL 585

Query: 171 TISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD 230
                 LF  M   G      PNE TF + + A   S L     L+    M +  G+   
Sbjct: 586 GDEAVALFDEMAAGG---EATPNEVTFIAALAACSHSGLVDRG-LELFHGMERDHGVKPT 641

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMI--QKNVVSMNGLMEGRRKGKEVH-GYLIRSGL 287
             + + +V    R G    A  I   M   ++ V + + L+   R  + V  G +    L
Sbjct: 642 PDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERL 701

Query: 288 FDMVAVGNG-----LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
           F++   G       L N+Y+  G  D S +V R  + +  V+     S ++ +G    AI
Sbjct: 702 FEL-EPGEASHYVLLCNIYSAAGMWDKSVAV-RVRMRRQGVAKEPGCSWIELDG----AI 755

Query: 343 MNFCA 347
             F A
Sbjct: 756 HRFMA 760



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 1/97 (1%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   ++H    D+ + + L+++Y + G LA++  +FD +P RN ++W  ++  Y   
Sbjct: 524 KEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMH 583

Query: 65  GMSNEACKMFKEMVRAG-FLLNRYALGSVLRACQECG 100
           G+ +EA  +F EM   G    N     + L AC   G
Sbjct: 584 GLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSG 620



 Score = 47.0 bits (110), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 111/285 (38%), Gaps = 57/285 (20%)

Query: 558 RLDHFTFATVLSACASVATLERGMEVHACGVRACL--EFDVVIGSALVDMYSKCG--RID 613
           +LDHF     + + A++        +HA  +R  L       +G+AL+  Y++CG     
Sbjct: 60  QLDHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAA 119

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP-DHVTFVGVLSAC 672
            A        +R+  S+NS+IS        ++AL     M  +G       T V VL AC
Sbjct: 120 LALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLAC 179

Query: 673 SH-------------------AGLVDEGFKHFK-----SMSQVYGLIPQLEQ-------- 700
           SH                    G +DEG + F      SM    GL+   +         
Sbjct: 180 SHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAA 239

Query: 701 ----------FSCMVDLL---GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
                     ++ M+ LL   GR  E  ++   +  + + P+ + + + L AC R     
Sbjct: 240 FSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSR--LEM 297

Query: 748 TELGRKAANMLFEMEPQNAVNYV--LLANMYASGGKWEDVAKARK 790
             LGR+   ++ +     A ++V   L +MYA     E VA AR+
Sbjct: 298 LALGREMHAVVLKDADLAANSFVASALVDMYAGN---EKVASARR 339


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 255/662 (38%), Positives = 382/662 (57%), Gaps = 7/662 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+ VH  L   GL         L NMYAKC    D+R VF  M  +D V+WN +++G  +
Sbjct: 244 GRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYAR 303

Query: 335 NGCYEEAIMNFCAMRR-DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           NG  E A+     M+  DG      +L+S L +CA    +   +++H   ++ G D  V+
Sbjct: 304 NGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVN 363

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           VS A+L +Y   G +    KVF  M + + VSWN++I  +A++    +EA+  +  M   
Sbjct: 364 VSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAEN-GDATEALALFKRMVGE 422

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G     V+ +  L A         G +VH  +++  + +   + NAL++ Y KC   D  
Sbjct: 423 GVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLA 482

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            ++F  +   +  VSWN+MI G   N     A+ L   M     + D FT  +++ A A 
Sbjct: 483 AQVFDELG-YKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALAD 541

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           ++   +   +H   +R  L+ DV + +AL+DMY+KCGR+  A   F+    R+V +WN+M
Sbjct: 542 ISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAM 601

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I GY  HG G  A+ LF +MK  G +P+  TF+ VLSACSHAGLVDEG ++F SM + YG
Sbjct: 602 IHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYG 661

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           L P +E +  MVDLLGRAG+L +   FI KMP+ P   ++  +LGAC     +  EL  +
Sbjct: 662 LEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGAC--KLHKNVELAEE 719

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
           +A  +FE+EP+  V +VLLAN+YA+   W+DVA+ R AM++  ++K  G S V +K+ +H
Sbjct: 720 SAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIH 779

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
            F +G  +H +   IY +L +L ++++  GYVP T  ++ D+E + K  L++ HSEK+A+
Sbjct: 780 TFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPDTD-SIHDVEDDVKAQLLNTHSEKLAI 838

Query: 874 AFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           A+ L R +    I+I KNLRVC DCH+A K IS + GREI++RD  RFHHF DGKCSCGD
Sbjct: 839 AYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGD 898

Query: 933 YW 934
           YW
Sbjct: 899 YW 900



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 160/314 (50%), Gaps = 3/314 (0%)

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           +  S L  CA+   +  G+ +H +    GL  +   + AL ++YA         +VF  M
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA-GWSPNGVTFINILAAASSFSMGKL 477
           P  D+V+WN+++  +A +  L   AV   + M+   G  P+ VT +++L A +       
Sbjct: 287 PARDRVAWNALVAGYARN-GLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGA 345

Query: 478 GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI 537
             +VHA  ++     +  +  A+L  Y KCG +D   K+F  M + R+ VSWN+MI GY 
Sbjct: 346 CREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQD-RNSVSWNAMIKGYA 404

Query: 538 HNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
            N    +A+ L   M+  G  +   +    L AC  +  L+ G  VH   VR  LE +V 
Sbjct: 405 ENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVN 464

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           + +AL+ MY KC R D A++ FD +  +   SWN+MI G  ++G  + A+ LFS+M+L+ 
Sbjct: 465 VMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLEN 524

Query: 658 PLPDHVTFVGVLSA 671
             PD  T V ++ A
Sbjct: 525 VKPDSFTLVSIIPA 538



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 219/474 (46%), Gaps = 53/474 (11%)

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           S+L+ C     +    G  VH  +     + + L +  L  MY  C    D ARR+F+ +
Sbjct: 230 SLLKLC--AARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGD-ARRVFDRM 286

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLS 210
             RD ++WN++++ Y++ G   +   +  RMQ E      +P+  T  S++ A   +   
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGE---RPDAVTLVSVLPACADAQAL 343

Query: 211 GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
           G+   +++ A   + G    + V +A++  + + G    ARK+F+ M  +N VS N +++
Sbjct: 344 GA--CREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIK 401

Query: 271 G--------------RR---------------------------KGKEVHGYLIRSGLFD 289
           G              +R                           +G+ VH  L+R GL  
Sbjct: 402 GYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLES 461

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
            V V N L+ MY KC   D +  VF  +  K  VSWN MI G  QNG  E+A+  F  M+
Sbjct: 462 NVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQ 521

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
            + +   +F+L+S + + A +   +  + IHG  ++L LD DV V  AL+ +YA  G +S
Sbjct: 522 LENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVS 581

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
               +F    +   ++WN++I  +  S      AV+ + +M+ +G  PN  TF+++L+A 
Sbjct: 582 IARSLFNSARDRHVITWNAMIHGYG-SHGSGKVAVELFEEMKSSGKVPNETTFLSVLSAC 640

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMS 521
           S   +   G +  +  +K +   E  +E+   ++   G+ G++ +      +M 
Sbjct: 641 SHAGLVDEGQEYFSS-MKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMP 693



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 124/232 (53%), Gaps = 2/232 (0%)

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           +G  P   TF ++L   ++ +    G  VHAQ+    ++ E     AL + Y KC    D
Sbjct: 219 SGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGD 278

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR-GQRLDHFTFATVLSAC 571
             ++F RM   RD V+WN++++GY  N L   A+ +V  M +  G+R D  T  +VL AC
Sbjct: 279 ARRVFDRMPA-RDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPAC 337

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           A    L    EVHA  VR   +  V + +A++D+Y KCG +D A + FD M  RN  SWN
Sbjct: 338 ADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWN 397

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
           +MI GYA +G   +AL LF +M  +G     V+ +  L AC   G +DEG +
Sbjct: 398 AMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRR 449



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 115/472 (24%), Positives = 203/472 (43%), Gaps = 53/472 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H Q+   G + +      L N+Y +      A ++FD MP R+ V+W  +V+GY   
Sbjct: 245 RAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARN 304

Query: 65  GMSNEACKMFKEMVRA-GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           G++  A  M   M    G   +   L SVL AC +    G     +VH   ++       
Sbjct: 305 GLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALG--ACREVHAFAVRGGFDEQV 362

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            VS  ++ +Y  C  + D AR++F+ ++ R+ +SWN++I  Y++ GD      LF RM  
Sbjct: 363 NVSTAILDVYCKC-GAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVG 421

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           EG   +   +     +L        L     + ++L  +   GL S++ V +AL++ + +
Sbjct: 422 EGVDVT---DVSVLAALHACGELGFLDEGRRVHELLVRI---GLESNVNVMNALITMYCK 475

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG-------------------------------- 271
                 A ++F+++  K  VS N ++ G                                
Sbjct: 476 CKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSI 535

Query: 272 ---------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                      + + +HGY IR  L   V V   L++MYAKCG +  +RS+F     +  
Sbjct: 536 IPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHV 595

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           ++WN MI G   +G  + A+  F  M+  G + +  + +S LS+C+  G +  GQ+    
Sbjct: 596 ITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSS 655

Query: 383 GLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
             +  GL+  +     ++ L   AG L         MP    +S + +++GA
Sbjct: 656 MKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGA 707



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 3/176 (1%)

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           TF ++L  CA+ A L  G  VHA      L  + +  +AL +MY+KC R   A R FD M
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMK-LDGPLPDHVTFVGVLSACSHAGLVDEG 681
           P R+  +WN++++GYAR+G  + A+ +  +M+  DG  PD VT V VL AC+ A  +   
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALG-A 345

Query: 682 FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
            +   + +   G   Q+   + ++D+  + G +D   +  + M    NS+ W  ++
Sbjct: 346 CREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQ-DRNSVSWNAMI 400



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 10/270 (3%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H  +++ G   +V + N LI +Y +      A+++FDE+  +  VSW  ++ G T
Sbjct: 446 EGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCT 505

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG-PSGFKFGMQVHCLVLKSNQTF 121
             G S +A ++F  M       + + L S++ A  +   P   ++   +H   ++ +   
Sbjct: 506 QNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARW---IHGYSIRLHLDQ 562

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V   LI MY  C      AR +F     R +I+WN++I  Y   G      +LF  M
Sbjct: 563 DVYVLTALIDMYAKC-GRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEM 621

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           +  G      PNE TF S+++A   + L      +   +M +  GL   +     +V   
Sbjct: 622 KSSG----KVPNETTFLSVLSACSHAGLVDEG-QEYFSSMKEDYGLEPGMEHYGTMVDLL 676

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
            R G  + A    ++M  +  +S+ G M G
Sbjct: 677 GRAGKLHEAWSFIQKMPMEPGISVYGAMLG 706


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 255/664 (38%), Positives = 379/664 (57%), Gaps = 13/664 (1%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKC----GTIDDSRSVFRFMIGKDSVSWNTMISG 331
           K +H  L+R  L       N L+N+   C    G+ + S+ VF  +   +   WNTMI G
Sbjct: 33  KHIHARLLRLHL----DQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRG 88

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
           L    C+++AI  + +MR  G + +NF++   L +CA    + LG +IH   +K G D D
Sbjct: 89  LVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHD 148

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           V V  +LLSLY         LKVF  +P+ + VSW ++I  +  S     EA+  +  + 
Sbjct: 149 VFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYI-SSGHFREAIGAFKKLL 207

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             G  P+  + + +LAA +       G  +   +    +     +  +LL  Y KCG ++
Sbjct: 208 EMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLE 267

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
               IF+ M E+ D VSW++MI GY  N L  +A++L + M     + D +T   VLSAC
Sbjct: 268 RANLIFSAMPEK-DIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSAC 326

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           A++  L+ G+   +   R     + V+G+AL+DMYSKCG +  A   F  M  ++   WN
Sbjct: 327 ATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWN 386

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           +M+ G + +GH     +LFS ++  G  PD  TF+G+L  C+H G V+EG + F +M +V
Sbjct: 387 AMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRV 446

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
           + L P +E + CMVDLLGRAG L++  + IN MP+ PN+++W  +LG C     + T L 
Sbjct: 447 FSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLH--KDTHLA 504

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
            +    L E+EP N+ NYV L+N+Y+   +WE+  K R  MKE +++K   CSW+ +   
Sbjct: 505 EQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGI 564

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
           VH F+ GD+SH   + IY KL EL ++++  G+VP T+F LFD+E E KE  + YHSEK+
Sbjct: 565 VHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKL 624

Query: 872 AVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           AVAF ++       IR++KNLRVCGDCH A K ISKI  REI++RD+NRFH F DG CSC
Sbjct: 625 AVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSC 684

Query: 931 GDYW 934
            DYW
Sbjct: 685 RDYW 688



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 176/370 (47%), Gaps = 4/370 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R G ++H  L+++G    V V   L+++Y KC   DD+  VF  +  K+ VSW  +I+G 
Sbjct: 131 RLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGY 190

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
             +G + EAI  F  +   GL   +FSL+  L++CA LG    G+ I       G+  +V
Sbjct: 191 ISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNV 250

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V+ +LL +Y   G L R   +F  MPE D VSW+++I  +A    L  +A+  +  M+ 
Sbjct: 251 FVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYA-FNGLPQQALDLFFQMQS 309

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
               P+  T + +L+A ++     LG    + + +    +   +  AL+  Y KCG +  
Sbjct: 310 ENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQ 369

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
             +IF  M +R+D V WN+M+ G   N       +L   + + G R D  TF  +L  C 
Sbjct: 370 AWEIFTAM-KRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCT 428

Query: 573 SVATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSW 630
               +  G +      R   L   +     +VD+  + G ++ A +  + MP++ N   W
Sbjct: 429 HGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVW 488

Query: 631 NSMISGYARH 640
            +++ G   H
Sbjct: 489 GALLGGCKLH 498



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/473 (21%), Positives = 207/473 (43%), Gaps = 56/473 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H ++L+     D +L N ++   +  G    +  +F ++ + N   W  ++ G   K
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
              ++A  ++  M   GFL N + +  VL+AC        + G+++H L++K+    D  
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACAR--KLDVRLGLKIHSLLVKAGYDHDVF 150

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V   L+++Y  C ++ D A ++F++I  ++++SW +II+ Y   G        F ++   
Sbjct: 151 VKTSLLSLYVKC-DNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEM 209

Query: 185 GFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           G    LKP+ ++   ++ A        SG ++ + I      +G+  +++V ++L+  + 
Sbjct: 210 G----LKPDSFSLVKVLAACARLGDCTSGEWIDRYI----SDSGMGRNVFVATSLLDMYV 261

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGK----------EVHGYLIRSGLFDMVA 292
           + GN   A  IF  M +K++VS + +++G               ++    ++   + MV 
Sbjct: 262 KCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVG 321

Query: 293 V-------------------------------GNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
           V                               G  L++MY+KCG++  +  +F  M  KD
Sbjct: 322 VLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKD 381

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            V WN M+ GL  NG  +     F  + + G+     + I  L  C   G++  G+Q   
Sbjct: 382 RVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN 441

Query: 382 EGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
              ++  L   +     ++ L   AG L+   ++   MP + + V W +++G 
Sbjct: 442 NMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGG 494



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 13/268 (4%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G   +VF+  +L+++YV+ G+L  A+ +F  MP+++ VSW+ ++ GY   G+  +A  +F
Sbjct: 245 GMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLF 304

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
            +M       + Y +  VL AC   G      G+    L+ ++    + ++   LI MY 
Sbjct: 305 FQMQSENLKPDCYTMVGVLSACATLG--ALDLGIWASSLMDRNEFLSNPVLGTALIDMYS 362

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
            C   T  A  IF  ++ +D + WN+++   S  G   +VF LFS +++ G R    P+E
Sbjct: 363 KCGSVTQ-AWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIR----PDE 417

Query: 195 YTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK 252
            TF  L+        V  G         M +   L   +     +V    R G    A +
Sbjct: 418 NTFIGLLCGCTHGGFVNEGRQFFNN---MKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQ 474

Query: 253 IFEQM-IQKNVVSMNGLMEGRRKGKEVH 279
           +   M ++ N V    L+ G +  K+ H
Sbjct: 475 LINNMPMKPNAVVWGALLGGCKLHKDTH 502


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 255/664 (38%), Positives = 379/664 (57%), Gaps = 13/664 (1%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKC----GTIDDSRSVFRFMIGKDSVSWNTMISG 331
           K +H  L+R  L       N L+N+   C    G+ + S+ VF  +   +   WNTMI G
Sbjct: 33  KHIHARLLRLHL----DQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRG 88

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
           L    C+++AI  + +MR  G + +NF++   L +CA    + LG +IH   +K G D D
Sbjct: 89  LVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHD 148

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           V V  +LLSLY         LKVF  +P+ + VSW ++I  +  S     EA+  +  + 
Sbjct: 149 VFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYI-SSGHFREAIGAFKKLL 207

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             G  P+  + + +LAA +       G  +   +    +     +  +LL  Y KCG ++
Sbjct: 208 EMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLE 267

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
               IF+ M E+ D VSW++MI GY  N L  +A++L + M     + D +T   VLSAC
Sbjct: 268 RANLIFSAMPEK-DIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSAC 326

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           A++  L+ G+   +   R     + V+G+AL+DMYSKCG +  A   F  M  ++   WN
Sbjct: 327 ATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWN 386

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           +M+ G + +GH     +LFS ++  G  PD  TF+G+L  C+H G V+EG + F +M +V
Sbjct: 387 AMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRV 446

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
           + L P +E + CMVDLLGRAG L++  + IN MP+ PN+++W  +LG C     + T L 
Sbjct: 447 FSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLH--KDTHLA 504

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
            +    L E+EP N+ NYV L+N+Y+   +WE+  K R  MKE +++K   CSW+ +   
Sbjct: 505 EQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGI 564

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
           VH F+ GD+SH   + IY KL EL ++++  G+VP T+F LFD+E E KE  + YHSEK+
Sbjct: 565 VHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKL 624

Query: 872 AVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           AVAF ++       IR++KNLRVCGDCH A K ISKI  REI++RD+NRFH F DG CSC
Sbjct: 625 AVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSC 684

Query: 931 GDYW 934
            DYW
Sbjct: 685 RDYW 688



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 176/370 (47%), Gaps = 4/370 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R G ++H  L+++G    V V   L+++Y KC   DD+  VF  +  K+ VSW  +I+G 
Sbjct: 131 RLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGY 190

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
             +G + EAI  F  +   GL   +FSL+  L++CA LG    G+ I       G+  +V
Sbjct: 191 ISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNV 250

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V+ +LL +Y   G L R   +F  MPE D VSW+++I  +A    L  +A+  +  M+ 
Sbjct: 251 FVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYA-FNGLPQQALDLFFQMQS 309

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
               P+  T + +L+A ++     LG    + + +    +   +  AL+  Y KCG +  
Sbjct: 310 ENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQ 369

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
             +IF  M +++D V WN+M+ G   N       +L   + + G R D  TF  +L  C 
Sbjct: 370 AWEIFTAM-KKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCT 428

Query: 573 SVATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSW 630
               +  G +      R   L   +     +VD+  + G ++ A +  + MP++ N   W
Sbjct: 429 HGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVW 488

Query: 631 NSMISGYARH 640
            +++ G   H
Sbjct: 489 GALLGGCKLH 498



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 103/473 (21%), Positives = 207/473 (43%), Gaps = 56/473 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H ++L+     D +L N ++   +  G    +  +F ++ + N   W  ++ G   K
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
              ++A  ++  M   GFL N + +  VL+AC        + G+++H L++K+    D  
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACAR--KLDVRLGLKIHSLLVKAGYDHDVF 150

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V   L+++Y  C ++ D A ++F++I  ++++SW +II+ Y   G        F ++   
Sbjct: 151 VKTSLLSLYVKC-DNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEM 209

Query: 185 GFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           G    LKP+ ++   ++ A        SG ++ + I      +G+  +++V ++L+  + 
Sbjct: 210 G----LKPDSFSLVKVLAACARLGDCTSGEWIDRYI----SDSGMGRNVFVATSLLDMYV 261

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGK----------EVHGYLIRSGLFDMVA 292
           + GN   A  IF  M +K++VS + +++G               ++    ++   + MV 
Sbjct: 262 KCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVG 321

Query: 293 V-------------------------------GNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
           V                               G  L++MY+KCG++  +  +F  M  KD
Sbjct: 322 VLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKD 381

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            V WN M+ GL  NG  +     F  + + G+     + I  L  C   G++  G+Q   
Sbjct: 382 RVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN 441

Query: 382 EGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
              ++  L   +     ++ L   AG L+   ++   MP + + V W +++G 
Sbjct: 442 NMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGG 494



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 13/268 (4%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G   +VF+  +L+++YV+ G+L  A+ +F  MP+++ VSW+ ++ GY   G+  +A  +F
Sbjct: 245 GMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLF 304

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
            +M       + Y +  VL AC   G      G+    L+ ++    + ++   LI MY 
Sbjct: 305 FQMQSENLKPDCYTMVGVLSACATLG--ALDLGIWASSLMDRNEFLSNPVLGTALIDMYS 362

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
            C   T  A  IF  ++ +D + WN+++   S  G   +VF LFS +++ G R    P+E
Sbjct: 363 KCGSVTQ-AWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIR----PDE 417

Query: 195 YTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK 252
            TF  L+        V  G         M +   L   +     +V    R G    A +
Sbjct: 418 NTFIGLLCGCTHGGFVNEGRQFFNN---MKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQ 474

Query: 253 IFEQM-IQKNVVSMNGLMEGRRKGKEVH 279
           +   M ++ N V    L+ G +  K+ H
Sbjct: 475 LINNMPMKPNAVVWGALLGGCKLHKDTH 502


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 273/785 (34%), Positives = 429/785 (54%), Gaps = 92/785 (11%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG 275
           + I A   KAGLL+  Y+ + L+S        YY          +      GL + RR  
Sbjct: 46  RAIHARAVKAGLLASAYLCNNLLS--------YYG---------ETAGGAGGLRDARRLF 88

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
            E+   L R  +F      N L++M+AK G + D+R VF  M  +D+VSW  M+ GL++ 
Sbjct: 89  DEIP--LARRNVF----TWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRA 142

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G + EAI     M  DG   + F+L + LSSCA      +G+++H   +KLGL S V V+
Sbjct: 143 GRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVA 202

Query: 396 NALLSLYADAG----------------------------YLSR---CLKVFFLMPEHDQV 424
           N++L++Y   G                            +L R      +F  MP    V
Sbjct: 203 NSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIV 262

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDM-RRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           SWN++I  + +   L ++A+K +  M   +  +P+  T  ++L+A ++    ++G QVHA
Sbjct: 263 SWNAMIAGY-NQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHA 321

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE--------------------- 522
            +++  +A  + + NAL+S Y K G +++  +I  +  E                     
Sbjct: 322 YILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDM 381

Query: 523 -----------RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
                       RD V+W +MI GY  N    +A++L   M+  G   + +T A VLS C
Sbjct: 382 ESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVC 441

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN-VYSW 630
           AS+A L+ G ++H   +R+ LE    + +A++ MY++ G   +A R FD +  R    +W
Sbjct: 442 ASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITW 501

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
            SMI   A+HG G++A+ LF +M   G  PD +T+VGVLSACSHAG V+EG +++  +  
Sbjct: 502 TSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKN 561

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
            + + P++  ++CMVDLL RAG   + +EFI +MP+ P+++ W ++L A CR + +  EL
Sbjct: 562 EHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSA-CRVH-KNAEL 619

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
              AA  L  ++P N+  Y  +AN+Y++ G+W D A+  KA KE  V+KE G SW  ++ 
Sbjct: 620 AELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRS 679

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
            +HVF A D  HP++D +Y     + ++++ AG+VP  +  L D++ E KE+L+S HSEK
Sbjct: 680 KIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEK 739

Query: 871 IAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +A+AF +++   K  +R+MKNLRVC DCH+A K ISK+  REI++RD+ RFHHF DG CS
Sbjct: 740 LAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCS 799

Query: 930 CGDYW 934
           C DYW
Sbjct: 800 CKDYW 804



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 155/551 (28%), Positives = 266/551 (48%), Gaps = 71/551 (12%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +VF  N+L++++ + G LA A  +F EMP+R++VSW  +V G    G   EA K   +M 
Sbjct: 97  NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC-- 136
             GF   ++ L +VL +C          G +VH  V+K        V+N ++ MYG C  
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGA--VGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGD 214

Query: 137 ----------------------------LESTDCARRIFEEIETRDLISWNSIISVYSQR 168
                                       L   D A  +FE +  R ++SWN++I+ Y+Q 
Sbjct: 215 AETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQN 274

Query: 169 GDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL 228
           G      KLFSRM  E    S+ P+E+T  S+++A  +  L    + +Q+ A + +  + 
Sbjct: 275 GLDAKALKLFSRMLHES---SMAPDEFTITSVLSACAN--LGNVRIGKQVHAYILRTEMA 329

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQK--NVVSMNGLMEGRRKGKEVHGYLIRSG 286
            +  V +AL+S +A+ G+   AR+I +Q ++   NV+S   L+EG               
Sbjct: 330 YNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEG--------------- 374

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
                         Y K G ++ +R +F  M  +D V+W  MI G +QNG  +EAI  F 
Sbjct: 375 --------------YVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFR 420

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
           +M   G   ++++L + LS CASL  +  G+QIH   ++  L+   SVSNA++++YA +G
Sbjct: 421 SMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSG 480

Query: 407 YLSRCLKVF-FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
                 ++F  +    + ++W S+I A A       EAV  + +M RAG  P+ +T++ +
Sbjct: 481 SFPWARRMFDQVCWRKETITWTSMIVALAQ-HGQGEEAVGLFEEMLRAGVEPDRITYVGV 539

Query: 466 LAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           L+A S       G + + Q+  ++ +A E +    ++    + G   + ++   RM    
Sbjct: 540 LSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEP 599

Query: 525 DEVSWNSMISG 535
           D ++W S++S 
Sbjct: 600 DAIAWGSLLSA 610



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 138/623 (22%), Positives = 275/623 (44%), Gaps = 102/623 (16%)

Query: 92  VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC---ARRIFE 148
           +L+ CQ     G   G  +H   +K+       + N L++ YG           ARR+F+
Sbjct: 32  LLQLCQTAANPGA--GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFD 89

Query: 149 EIE--TRDLISWNSIISVYSQRGDTISVFKLFSRM-QREGFRYSL--------------- 190
           EI    R++ +WNS++S++++ G       +F+ M +R+   +++               
Sbjct: 90  EIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAI 149

Query: 191 -----------KPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
                       P ++T  +++++   +V     + +++ + V K GL S + V +++++
Sbjct: 150 KTLLDMTADGFTPTQFTLTNVLSSC--AVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLN 207

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVN 299
            + + G+   A  +FE+M  ++V S                              N +V+
Sbjct: 208 MYGKCGDAETASTVFERMPVRSVSSW-----------------------------NAMVS 238

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN-F 358
           +    G +D + S+F  M G+  VSWN MI+G +QNG   +A+  F  M  +  M+ + F
Sbjct: 239 LNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEF 298

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV---- 414
           ++ S LS+CA+LG + +G+Q+H   L+  +  +  V+NAL+S YA +G +    ++    
Sbjct: 299 TITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQS 358

Query: 415 -----------------------------FFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
                                        F +M   D V+W ++I  + +      EA+ 
Sbjct: 359 METDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY-EQNGRNDEAID 417

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            +  M   G  PN  T   +L+  +S +    G Q+H + I+  +   +++ NA+++ Y 
Sbjct: 418 LFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYA 477

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           + G      ++F ++  R++ ++W SMI     +    +A+ L   M++ G   D  T+ 
Sbjct: 478 RSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYV 537

Query: 566 TVLSACASVATLERGMEVH-ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
            VLSAC+    +  G   +        +  ++   + +VD+ ++ G    A  F   MPV
Sbjct: 538 GVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPV 597

Query: 625 R-NVYSWNSMISGYARHGHGDKA 646
             +  +W S++S    H + + A
Sbjct: 598 EPDAIAWGSLLSACRVHKNAELA 620



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 198/467 (42%), Gaps = 107/467 (22%)

Query: 376 GQQIHGEGLKLGL-------------------------------------DSDVSVSNAL 398
           G+ IH   +K GL                                       +V   N+L
Sbjct: 45  GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSL 104

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           LS++A +G L+    VF  MPE D VSW  ++    +      EA+K  LDM   G++P 
Sbjct: 105 LSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGL-NRAGRFGEAIKTLLDMTADGFTPT 163

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
             T  N+L++ +    G +G +VH+ V+K  + +   + N++L+ YGKCG+ +    +F 
Sbjct: 164 QFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFE 223

Query: 519 RMSER------------------------------RDEVSWNSMISGYIHNELLPKAMNL 548
           RM  R                              R  VSWN+MI+GY  N L  KA+ L
Sbjct: 224 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKL 283

Query: 549 VWFMMQRGQRL-DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
              M+       D FT  +VLSACA++  +  G +VHA  +R  + ++  + +AL+  Y+
Sbjct: 284 FSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYA 343

Query: 608 KCGRIDYASRFFD---------------------------------LMPVRNVYSWNSMI 634
           K G ++ A R  D                                 +M  R+V +W +MI
Sbjct: 344 KSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMI 403

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYG 693
            GY ++G  D+A+ LF  M   GP P+  T   VLS C+    +D G + H ++   +  
Sbjct: 404 VGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRA---IRS 460

Query: 694 LIPQLEQFS-CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           L+ +    S  ++ +  R+G         +++     ++ W +++ A
Sbjct: 461 LLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVA 507



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 97/437 (22%), Positives = 186/437 (42%), Gaps = 89/437 (20%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDE---------------------- 45
           H  ++K G    V + N+++N+Y + GD  +AS +F+                       
Sbjct: 187 HSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRM 246

Query: 46  ---------MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV-RAGFLLNRYALGSVLRA 95
                    MP R+ VSW  +++GY   G+  +A K+F  M+  +    + + + SVL A
Sbjct: 247 DLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSA 306

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE------ 149
           C   G    + G QVH  +L++   ++  V+N LI+ Y     S + ARRI ++      
Sbjct: 307 CANLG--NVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS-GSVENARRIMDQSMETDL 363

Query: 150 ---------------------------IETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
                                      +  RD+++W ++I  Y Q G       LF  M 
Sbjct: 364 NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI 423

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             G     +PN YT  ++++   S  L+     +QI     ++ L     V +A+++ +A
Sbjct: 424 TCG----PEPNSYTLAAVLSVCAS--LACLDYGKQIHCRAIRSLLERSSSVSNAIITMYA 477

Query: 243 RLGNFYYARKIFEQMI-QKNVVSMNGL---MEGRRKGKEVHGY---LIRSGLFDMVAVGN 295
           R G+F +AR++F+Q+  +K  ++   +   +    +G+E  G    ++R+G+        
Sbjct: 478 RSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYV 537

Query: 296 GLVNMYAKCGTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           G+++  +  G +++ +  +        I  +   +  M+  L + G + EA   F  +RR
Sbjct: 538 GVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEA-QEF--IRR 594

Query: 351 DGLMSSNFSLISTLSSC 367
             +     +  S LS+C
Sbjct: 595 MPVEPDAIAWGSLLSAC 611



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 16/167 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRN-SVSWACIVSGYTH 63
           K  H + ++        + N +I +Y R G    A ++FD++  R  +++W  ++     
Sbjct: 451 KQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQ 510

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKFGMQVHCLVLKSNQTF 121
            G   EA  +F+EM+RAG   +R     VL AC   G    G ++  Q+     K+    
Sbjct: 511 HGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQI-----KNEHQI 565

Query: 122 DGLVSNV-----LIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS 163
              +S+      L+A  G   E+ +  RR+  E    D I+W S++S
Sbjct: 566 APEMSHYACMVDLLARAGLFSEAQEFIRRMPVE---PDAIAWGSLLS 609


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 294/899 (32%), Positives = 474/899 (52%), Gaps = 72/899 (8%)

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-TFDGLVSNVLIAMYGSCLESTDCARRIF 147
           +G +L+ C E      + G ++H  +  S     D ++   L+ MY  C    D    +F
Sbjct: 96  IGLLLQLCGE--YKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCL-VF 152

Query: 148 EEIETRDLISWNSIISVYSQRG---DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA 204
                ++L  WN+++S Y +     D + VF     +          P+ +T   +I A 
Sbjct: 153 NASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTE------FVPDNFTLPCVIKAC 206

Query: 205 YSSVLSGSY---LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
                 G Y   L + +     K  +LSD++VG+AL++ + + G    A K+F++M Q+N
Sbjct: 207 V-----GVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRN 261

Query: 262 VVSMN----------------GLMEGRRKGKE---------------------------V 278
           +VS N                GL +G   G E                            
Sbjct: 262 LVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVF 321

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           HG  ++ GL   + V + L++MY+KCG + ++R +F     K+ +SWN+MI G  ++  +
Sbjct: 322 HGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDF 380

Query: 339 EEAIMNFCAMR-RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG-LDSDVSVSN 396
             A      M+  D +  +  +L++ L  C      +  ++IHG  L+ G + SD  V+N
Sbjct: 381 RGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVAN 440

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           A ++ YA  G L     VF  M      SWN++IG    +     +A+  YL MR +G  
Sbjct: 441 AFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQN-GFPRKALDLYLLMRGSGLE 499

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P+  T  ++L+A +       G ++H  +++     +  I  +L+S Y +CG++   +  
Sbjct: 500 PDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLF 559

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F  M E ++ V WN+MI+G+  NE    A+++   M+      D  +    L AC+ V+ 
Sbjct: 560 FDNM-EEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSA 618

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           L  G E+H   V++ L     +  +L+DMY+KCG ++ +   FD + ++   +WN +I+G
Sbjct: 619 LRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITG 678

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           Y  HGHG KA+ LF  M+  G  PD VTF+ +L+AC+HAGLV EG ++   M  ++G+ P
Sbjct: 679 YGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKP 738

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAAN 756
           +LE ++C+VD+LGRAG L++  E +N++P  P+S IW ++L +C   N R  ++G K AN
Sbjct: 739 KLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSC--RNYRDLDIGEKVAN 796

Query: 757 MLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV 816
            L E+ P  A NYVL++N YA  GKW++V K R+ MKE  ++K+AGCSW+ +   V  F+
Sbjct: 797 KLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFL 856

Query: 817 AGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFV 876
            GDES  +   I +   EL +K+   GY P T   L +LE + K  ++  HSEK+A++F 
Sbjct: 857 VGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFG 916

Query: 877 LTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           L   +K   +R+ KNLR+C DCH+A K +SKI  REI++RD+ RFHHF +G CSCGDYW
Sbjct: 917 LLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 187/673 (27%), Positives = 306/673 (45%), Gaps = 70/673 (10%)

Query: 16  FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFK 75
           F  DV L   L+ +Y        +  +F+    +N   W  ++SGY    +  +A  +F 
Sbjct: 125 FQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFV 184

Query: 76  EMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
           EM+    F+ + + L  V++AC   G    + G  VH   LK+    D  V N LIAMYG
Sbjct: 185 EMISLTEFVPDNFTLPCVIKAC--VGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYG 242

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR--EGFRYSLKP 192
                 + A ++F+++  R+L+SWNS++    + G     + LF  +    EG    L P
Sbjct: 243 K-FGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEG----LMP 297

Query: 193 NEYTFGSLITAAYSSVLSGSYLLQQIL-AMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           +     +++T        G   L  +   +  K GL  +L V S+L+  +++ G    AR
Sbjct: 298 D---VATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEAR 354

Query: 252 KIFEQMIQKNVVSMNGLMEGRRKG------------------------------------ 275
            +F+   +KNV+S N ++ G  K                                     
Sbjct: 355 VLFDTN-EKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEE 413

Query: 276 ------KEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
                 KE+HGY +R G       V N  V  YAKCG++  +  VF  M  K   SWN +
Sbjct: 414 IQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNAL 473

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           I G  QNG   +A+  +  MR  GL    F++ S LS+CA L  +  G++IHG  L+ G 
Sbjct: 474 IGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGF 533

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           + D  +  +L+SLY   G +      F  M E + V WN++I  F+ +E    +A+  + 
Sbjct: 534 ELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNE-FPFDALDMFH 592

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            M  +   P+ ++ I  L A S  S  +LG ++H   +K ++   + +  +L+  Y KCG
Sbjct: 593 QMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCG 652

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
            M+  + IF R+   + EV+WN +I+GY  +    KA+ L   M   G R D  TF  +L
Sbjct: 653 CMEQSQNIFDRV-HLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALL 711

Query: 569 SACASVATLERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +AC     +  G+E         G++  LE    +    VDM  + GR++ A    + +P
Sbjct: 712 TACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACV----VDMLGRAGRLNEALELVNELP 767

Query: 624 VR-NVYSWNSMIS 635
            + +   W+S++S
Sbjct: 768 DKPDSRIWSSLLS 780



 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 156/577 (27%), Positives = 270/577 (46%), Gaps = 71/577 (12%)

Query: 14  HGFAY------DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           HGFA       DVF+ N LI +Y + G + SA K+FD+MP RN VSW  ++      G+ 
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278

Query: 68  NEACKMFKEMVRA--GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
            E+  +FK ++    G + +   + +V+  C   G    + GM  H L LK     +  V
Sbjct: 279 EESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGE--VRLGMVFHGLALKLGLCGELKV 336

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           ++ L+ MY  C     C  R+  +   +++ISWNS+I  YS+  D    F+L  +MQ E 
Sbjct: 337 NSSLLDMYSKC--GYLCEARVLFDTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMED 394

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYL-LQQILAMVKKAGLL-SDLYVGSALVSGFAR 243
               +K NE T  +++      +    +L L++I     + G + SD  V +A V+G+A+
Sbjct: 395 ---KVKVNEVTLLNVLPVCEEEI---QFLKLKEIHGYALRHGFIQSDELVANAFVAGYAK 448

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGR------RK----------------------- 274
            G+ +YA  +F  M  K V S N L+ G       RK                       
Sbjct: 449 CGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASL 508

Query: 275 ------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                       GKE+HG ++R+G      +   LV++Y +CG I  ++  F  M  K+ 
Sbjct: 509 LSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNL 568

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           V WNTMI+G  QN    +A+  F  M    +     S+I  L +C+ +  + LG+++H  
Sbjct: 569 VCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCF 628

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            +K  L     V+ +L+ +YA  G + +   +F  +    +V+WN +I  +        +
Sbjct: 629 AVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYG-IHGHGRK 687

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-----IKYNVANETTIE 497
           A++ +  M+ AG+ P+ VTFI +L A +   +   G +   Q+     IK  + +   + 
Sbjct: 688 AIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVV 747

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           + L    G+ G +++  ++   + ++ D   W+S++S
Sbjct: 748 DML----GRAGRLNEALELVNELPDKPDSRIWSSLLS 780



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 117/473 (24%), Positives = 220/473 (46%), Gaps = 57/473 (12%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           +FH   LK G   ++ + ++L+++Y + G L  A  LFD   ++N +SW  ++ GY+   
Sbjct: 320 VFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDR 378

Query: 66  MSNEACKMFKEM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN--QTFD 122
               A ++ ++M +     +N   L +VL  C+E     F    ++H   L+    Q+ D
Sbjct: 379 DFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEE--EIQFLKLKEIHGYALRHGFIQS-D 435

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            LV+N  +A Y  C  S   A  +F  +E++ + SWN++I  + Q G       L+  M+
Sbjct: 436 ELVANAFVAGYAKC-GSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMR 494

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             G    L+P+ +T  SL++A   + L      ++I   + + G   D ++  +LVS + 
Sbjct: 495 GSG----LEPDLFTIASLLSAC--ARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYV 548

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG------------------------------- 271
           + G    A+  F+ M +KN+V  N ++ G                               
Sbjct: 549 QCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIG 608

Query: 272 ----------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                      R GKE+H + ++S L +   V   L++MYAKCG ++ S+++F  +  K 
Sbjct: 609 ALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKG 668

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            V+WN +I+G   +G   +AI  F +M+  G    + + I+ L++C   G +  G +  G
Sbjct: 669 EVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLG 728

Query: 382 EGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH-DQVSWNSVIGA 432
           +   L G+   +     ++ +   AG L+  L++   +P+  D   W+S++ +
Sbjct: 729 QMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSS 781



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 127/259 (49%), Gaps = 12/259 (4%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  +L++GF  D F+C +L+++YV+ G +  A   FD M ++N V W  +++G++ 
Sbjct: 521 GKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQ 580

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                +A  MF +M+ +    +  ++   L AC +   S  + G ++HC  +KS+ T   
Sbjct: 581 NEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQV--SALRLGKELHCFAVKSHLTEHS 638

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V+  LI MY  C    + ++ IF+ +  +  ++WN +I+ Y   G      +LF  MQ 
Sbjct: 639 FVTCSLIDMYAKC-GCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQN 697

Query: 184 EGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            GFR    P+  TF +L+TA   +  V  G   L Q+ ++    G+   L   + +V   
Sbjct: 698 AGFR----PDSVTFIALLTACNHAGLVAEGLEYLGQMQSLF---GIKPKLEHYACVVDML 750

Query: 242 ARLGNFYYARKIFEQMIQK 260
            R G    A ++  ++  K
Sbjct: 751 GRAGRLNEALELVNELPDK 769


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 280/894 (31%), Positives = 476/894 (53%), Gaps = 62/894 (6%)

Query: 46  MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFK 105
           M  R + S    ++G+       +   +F +  R    L        LRAC+  G   ++
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRR-WQ 59

Query: 106 FGMQVHCLVLKSNQTFDGLVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSII 162
              ++H   +        +V N+LI +Y   G  L     ARR+FEE+  RD +SW +++
Sbjct: 60  VVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLP----ARRVFEELSARDNVSWVAML 115

Query: 163 SVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMV 222
           S Y+Q G       L+ +M R G    + P  Y   S++++   + L     L  I A  
Sbjct: 116 SGYAQNGLGEEALGLYRQMHRAG----VVPTPYVLSSVLSSCTKAELFAQGRL--IHAQG 169

Query: 223 KKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------- 272
            K G  S+++VG+A+++ + R G+F  A ++F  M  ++ V+ N L+ G           
Sbjct: 170 YKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHAL 229

Query: 273 -------------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
                                          +KG ++H YL ++G+     +   L+++Y
Sbjct: 230 EIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLY 289

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
            KCG ++ +  +F      + V WN M+    Q     ++   FC M+  G+  + F+  
Sbjct: 290 VKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYP 349

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
             L +C     I LG+QIH   +K G +SD+ VS  L+ +Y+  G+L +  +V  ++ E 
Sbjct: 350 CILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK 409

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D VSW S+I  +   E    +A+  + +M++ G  P+ +   + ++  +  +  + G Q+
Sbjct: 410 DVVSWTSMIAGYVQHEC-CKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQI 468

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           HA++     + + +I NAL++ Y +CG + +    F  M E +D ++ N ++SG+  + L
Sbjct: 469 HARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEM-ELKDGITGNGLVSGFAQSGL 527

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +A+ +   M Q G + + FTF + LSA A++A +++G ++HA  ++    F+  +G+A
Sbjct: 528 HEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA 587

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+ +Y KCG  + A   F  M  RN  SWN++I+  ++HG G +AL LF QMK +G  P+
Sbjct: 588 LISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPN 647

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            VTF+GVL+ACSH GLV+EG  +FKSMS  YG+ P+ + ++C++D+ GRAG+LD+ ++FI
Sbjct: 648 DVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFI 707

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
            +MPI  ++++WRT+L AC     +  E+G  AA  L E+EP ++ +YVLL+N YA   K
Sbjct: 708 EEMPIAADAMVWRTLLSAC--KVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEK 765

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           W +  + RK M++  V+KE G SW+ +K+ VH F  GD  HP  + IY  L  +N ++  
Sbjct: 766 WANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAK 825

Query: 842 AGYVPQTKFALF-DLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRV 893
            GY  Q K+ LF D E E ++     HSEK+AV F +++    +P+R++KNLRV
Sbjct: 826 VGY-KQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878



 Score =  287 bits (735), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 199/681 (29%), Positives = 338/681 (49%), Gaps = 62/681 (9%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H + +  G      + N LI++Y + G +  A ++F+E+  R++VSW  ++SGY   G+
Sbjct: 64  IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA  ++++M RAG +   Y L SVL +C +     F  G  +H    K     +  V 
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKA--ELFAQGRLIHAQGYKHGFCSEIFVG 181

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N +I +Y  C  S   A R+F ++  RD +++N++IS ++Q G      ++F  MQ  G 
Sbjct: 182 NAVITLYLRC-GSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG- 239

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              L P+  T  SL+ A  S  L       Q+ + + KAG+ SD  +  +L+  + + G+
Sbjct: 240 ---LSPDCVTISSLLAACAS--LGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGD 294

Query: 247 FYYARKIFEQMIQKNVVSMNGLM---------------------EGRRK----------- 274
              A  IF    + NVV  N ++                      G R            
Sbjct: 295 VETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRT 354

Query: 275 ---------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    G+++H   +++G    + V   L++MY+K G ++ +R V   +  KD VSW
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
            +MI+G  Q+ C ++A+  F  M++ G+   N  L S +S CA +  +  G QIH     
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G   DVS+ NAL++LYA  G +      F  M   D ++ N ++  FA S  L  EA+K
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQS-GLHEEALK 533

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            ++ M ++G   N  TF++ L+A+++ +  K G Q+HA+VIK   + ET + NAL+S YG
Sbjct: 534 VFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYG 593

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           KCG  +D +  F+ MSE R+EVSWN++I+    +    +A++L   M + G + +  TF 
Sbjct: 594 KCGSFEDAKMEFSEMSE-RNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFI 652

Query: 566 TVLSACASVATLERGMEVHAC-----GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
            VL+AC+ V  +E G+          G+R   +    +    +D++ + G++D A +F +
Sbjct: 653 GVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACV----IDIFGRAGQLDRAKKFIE 708

Query: 621 LMPV-RNVYSWNSMISGYARH 640
            MP+  +   W +++S    H
Sbjct: 709 EMPIAADAMVWRTLLSACKVH 729



 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 160/574 (27%), Positives = 281/574 (48%), Gaps = 52/574 (9%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +L H Q  KHGF  ++F+ N +I +Y+R G    A ++F +MP R++V++  ++SG+  
Sbjct: 162 GRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQ 221

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G    A ++F+EM  +G   +   + S+L AC   G    + G Q+H  + K+  + D 
Sbjct: 222 CGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLG--DLQKGTQLHSYLFKAGISSDY 279

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           ++   L+ +Y  C +  + A  IF   +  +++ WN ++  + Q  D    F+LF +MQ 
Sbjct: 280 IMEGSLLDLYVKCGD-VETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQA 338

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G R    PN++T+  ++     +      L +QI ++  K G  SD+YV   L+  +++
Sbjct: 339 AGIR----PNQFTYPCILRTC--TCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSK 392

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG-------------------------------- 271
            G    AR++ E + +K+VVS   ++ G                                
Sbjct: 393 YGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASA 452

Query: 272 ---------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                     R+G ++H  +  SG    V++ N LVN+YA+CG I ++ S F  M  KD 
Sbjct: 453 ISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDG 512

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           ++ N ++SG  Q+G +EEA+  F  M + G+  + F+ +S LS+ A+L  I  G+QIH  
Sbjct: 513 ITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHAR 572

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            +K G   +  V NAL+SLY   G        F  M E ++VSWN++I + +     + E
Sbjct: 573 VIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGL-E 631

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALL 501
           A+  +  M++ G  PN VTFI +LAA S   + + G     +   +Y +         ++
Sbjct: 632 ALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVI 691

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             +G+ G++D  +K    M    D + W +++S 
Sbjct: 692 DIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSA 725



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 49/99 (49%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H +++K G +++  + N LI++Y + G    A   F EM +RN VSW  I++  
Sbjct: 564 KQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSC 623

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           +  G   EA  +F +M + G   N      VL AC   G
Sbjct: 624 SQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVG 662


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 276/719 (38%), Positives = 408/719 (56%), Gaps = 43/719 (5%)

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLI 283
           K+ +    Y  +  +  +++ G   +ARK F+ +   NV S N ++    K       LI
Sbjct: 36  KSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRP---LI 92

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
              LFD +                             D VS+NT+IS     G    A+ 
Sbjct: 93  AHQLFDQIPE--------------------------PDLVSYNTLISAYADCGETAPALG 126

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            F  MR  GL    F+L + +++C     + L  Q+H   +  G DS VSV+NALL+ Y 
Sbjct: 127 LFSGMREMGLDMDGFTLSAVITACCDD--VGLIGQLHSVAVSSGFDSYVSVNNALLTYYG 184

Query: 404 DAGYLSRCLKVFFLMPE-HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
             G L    +VF+ M    D+VSWNS+I A+   +   S+A+  + +M R G + +  T 
Sbjct: 185 KNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQE-GSKALGLFQEMVRRGLNVDMFTL 243

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE-MDDCEKIFARMS 521
            ++L A +       G Q H Q+IK      + + + L+  Y KCG  M DC K+F  ++
Sbjct: 244 ASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEIT 303

Query: 522 ERRDEVSWNSMISGYIHNE-LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
           E  D V WN+M+SGY  NE  L  A+     M   G R +  +F  V+SAC+++++  +G
Sbjct: 304 EP-DLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQG 362

Query: 581 MEVHACGVRACLEFD-VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
            ++H+  +++ +  + + + +AL+ MYSKCG +  A R FD M   N  S NSMI+GYA+
Sbjct: 363 KQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQ 422

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
           HG   ++L LF  M      P  +TF+ VLSAC+H G V+EG+ +F  M + + + P+ E
Sbjct: 423 HGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAE 482

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            +SCM+DLLGRAG+L + E  I +MP  P S+ W ++LGAC        EL  KAAN + 
Sbjct: 483 HYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHG--NIELAVKAANQVL 540

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           ++EP NA  YV+L+NMYAS G+WE+VA  RK M++  VKK+ GCSW+ +K  +HVFVA D
Sbjct: 541 QLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAED 600

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPE---SKEDLVSYHSEKIAVAF- 875
            SHP    IYE L+E++ KM+ AGYVP  ++AL   +      KE  + +HSEK+AVAF 
Sbjct: 601 SSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFG 660

Query: 876 VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +++     P+ ++KNLR+CGDCH+A KFIS I GREI +RD++RFH F +G+CSCGDYW
Sbjct: 661 LISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 206/463 (44%), Gaps = 62/463 (13%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +VF  N +I  Y +      A +LFD++P+ + VS+  ++S Y   G +  A  +F  M 
Sbjct: 73  NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMR 132

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS--NVLIAMYGSC 136
             G  ++ + L +V+ AC  C   G   G Q+H + + S   FD  VS  N L+  YG  
Sbjct: 133 EMGLDMDGFTLSAVITAC--CDDVGL-IG-QLHSVAVSSG--FDSYVSVNNALLTYYGKN 186

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
            +  D  R  +     RD +SWNS+I  Y Q  +      LF  M R G    +    +T
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDM----FT 242

Query: 197 FGSLITAAYS-SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN-FYYARKIF 254
             S++TA      LSG     Q    + K G   + +VGS L+  +++ G      RK+F
Sbjct: 243 LASVLTAFTCLEDLSGGL---QFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVF 299

Query: 255 EQMIQKNVVSMNGLMEG------------------------------------------R 272
           E++ + ++V  N ++ G                                           
Sbjct: 300 EEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSP 359

Query: 273 RKGKEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
            +GK++H   ++S +  + ++V N L+ MY+KCG + D+R +F  M   ++VS N+MI+G
Sbjct: 360 SQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAG 419

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDS 390
             Q+G   E++  F  M    +  ++ + IS LS+CA  G +  G    +    K  ++ 
Sbjct: 420 YAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEP 479

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           +    + ++ L   AG LS    +   MP     + W S++GA
Sbjct: 480 EAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGA 522



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 229/483 (47%), Gaps = 45/483 (9%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD-RNSVSWACIVSGYTHKG 65
            H   +  GF   V + N L+  Y + GDL  A ++F  M   R+ VSW  ++  Y    
Sbjct: 160 LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQ 219

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRA--CQECGPSGFKFGMQVHCLVLKSNQTFDG 123
             ++A  +F+EMVR G  ++ + L SVL A  C E        G+Q H  ++K+    + 
Sbjct: 220 EGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLE----DLSGGLQFHGQLIKTGFHQNS 275

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTIS-VFKLFSRMQ 182
            V + LI +Y  C       R++FEEI   DL+ WN+++S YSQ  + +    + F +MQ
Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQ 335

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD-LYVGSALVSGF 241
             G+R    PN+ +F  +I+A   S LS     +QI ++  K+ + S+ + V +AL++ +
Sbjct: 336 GIGYR----PNDCSFVCVISAC--SNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMY 389

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG-RRKGKEVHG-YLIRSGLFDMVAVGN---- 295
           ++ GN   AR++F++M + N VS+N ++ G  + G E+   +L +  L   +A  +    
Sbjct: 390 SKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFI 449

Query: 296 GLVNMYAKCGTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
            +++  A  G +++  + F     +F I  ++  ++ MI  L + G   EA  N  A  R
Sbjct: 450 SVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEA-ENLIA--R 506

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
                 +    S L +C + G I L  +   + L+L   S+ +    L ++YA AG    
Sbjct: 507 MPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLE-PSNAAPYVVLSNMYASAGRWEE 565

Query: 411 CLKVFFLMPEH-----DQVSWNSV---IGAFA---DSEALVSEAVKYYLD----MRRAGW 455
              V   M +         SW  V   I  F     S  ++ E  ++  +    M+RAG+
Sbjct: 566 VATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGY 625

Query: 456 SPN 458
            P+
Sbjct: 626 VPD 628



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 12/146 (8%)

Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
           MN + + +QR        F  +L  C +   L  G  +H+  +++ +       +  + +
Sbjct: 1   MNQISWTLQR--------FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILL 52

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
           YSKCGR+ +A + F  +   NV+S+N++I+ YA+      A  LF Q+    P PD V++
Sbjct: 53  YSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQI----PEPDLVSY 108

Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQV 691
             ++SA +  G        F  M ++
Sbjct: 109 NTLISAYADCGETAPALGLFSGMREM 134


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 276/719 (38%), Positives = 408/719 (56%), Gaps = 43/719 (5%)

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLI 283
           K+ +    Y  +  +  +++ G   +ARK F+ +   NV S N ++    K       LI
Sbjct: 36  KSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRP---LI 92

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
              LFD +                             D VS+NT+IS     G    A+ 
Sbjct: 93  AHQLFDQIP--------------------------EPDLVSYNTLISAYADCGETAPALG 126

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            F  MR  GL    F+L + +++C     + L  Q+H   +  G DS VSV+NALL+ Y 
Sbjct: 127 LFSGMREMGLDMDXFTLSAVITACCDD--VGLIGQLHSVAVSSGFDSYVSVNNALLTYYG 184

Query: 404 DAGYLSRCLKVFFLMPE-HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
             G L    +VF+ M    D+VSWNS+I A+   +   S+A+  + +M R G + +  T 
Sbjct: 185 KNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQE-GSKALGLFQEMVRRGLNVDMFTL 243

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE-MDDCEKIFARMS 521
            ++L A +       G Q H Q+IK      + + + L+  Y KCG  M DC K+F  ++
Sbjct: 244 ASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEIT 303

Query: 522 ERRDEVSWNSMISGYIHNE-LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
           E  D V WN+M+SGY  NE  L  A+     M   G R +  +F  V+SAC+++++  +G
Sbjct: 304 EP-DLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQG 362

Query: 581 MEVHACGVRACLEFD-VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
            ++H+  +++ +  + + + +AL+ MYSKCG +  A R FD M   N  S NSMI+GYA+
Sbjct: 363 KQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQ 422

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
           HG   ++L LF  M      P  +TF+ VLSAC+H G V+EG+ +F  M + + + P+ E
Sbjct: 423 HGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAE 482

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            +SCM+DLLGRAG+L + E  I +MP  P S+ W ++LGAC        EL  KAAN + 
Sbjct: 483 HYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHG--NIELAVKAANQVL 540

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           ++EP NA  YV+L+NMYAS G+WE+VA  RK M++  VKK+ GCSW+ +K  +HVFVA D
Sbjct: 541 QLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAED 600

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPE---SKEDLVSYHSEKIAVAF- 875
            SHP    IYE L+E++ KM+ AGYVP  ++AL   +      KE  + +HSEK+AVAF 
Sbjct: 601 SSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFG 660

Query: 876 VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +++     P+ ++KNLR+CGDCH+A KFIS I GREI +RD++RFH F +G+CSCGDYW
Sbjct: 661 LISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 206/463 (44%), Gaps = 62/463 (13%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +VF  N +I  Y +      A +LFD++P+ + VS+  ++S Y   G +  A  +F  M 
Sbjct: 73  NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMR 132

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS--NVLIAMYGSC 136
             G  ++ + L +V+ AC  C   G   G Q+H + + S   FD  VS  N L+  YG  
Sbjct: 133 EMGLDMDXFTLSAVITAC--CDDVGL-IG-QLHSVAVSSG--FDSYVSVNNALLTYYGKN 186

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
            +  D  R  +     RD +SWNS+I  Y Q  +      LF  M R G    +    +T
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDM----FT 242

Query: 197 FGSLITAAYS-SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN-FYYARKIF 254
             S++TA      LSG     Q    + K G   + +VGS L+  +++ G      RK+F
Sbjct: 243 LASVLTAFTCLEDLSGGL---QFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVF 299

Query: 255 EQMIQKNVVSMNGLMEG------------------------------------------R 272
           E++ + ++V  N ++ G                                           
Sbjct: 300 EEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSP 359

Query: 273 RKGKEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
            +GK++H   ++S +  + ++V N L+ MY+KCG + D+R +F  M   ++VS N+MI+G
Sbjct: 360 SQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAG 419

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDS 390
             Q+G   E++  F  M    +  ++ + IS LS+CA  G +  G    +    K  ++ 
Sbjct: 420 YAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEP 479

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           +    + ++ L   AG LS    +   MP     + W S++GA
Sbjct: 480 EAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGA 522



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 229/483 (47%), Gaps = 45/483 (9%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD-RNSVSWACIVSGYTHKG 65
            H   +  GF   V + N L+  Y + GDL  A ++F  M   R+ VSW  ++  Y    
Sbjct: 160 LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQ 219

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRA--CQECGPSGFKFGMQVHCLVLKSNQTFDG 123
             ++A  +F+EMVR G  ++ + L SVL A  C E        G+Q H  ++K+    + 
Sbjct: 220 EGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLE----DLSGGLQFHGQLIKTGFHQNS 275

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTIS-VFKLFSRMQ 182
            V + LI +Y  C       R++FEEI   DL+ WN+++S YSQ  + +    + F +MQ
Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQ 335

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD-LYVGSALVSGF 241
             G+R    PN+ +F  +I+A   S LS     +QI ++  K+ + S+ + V +AL++ +
Sbjct: 336 GIGYR----PNDCSFVCVISAC--SNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMY 389

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG-RRKGKEVHG-YLIRSGLFDMVAVGN---- 295
           ++ GN   AR++F++M + N VS+N ++ G  + G E+   +L +  L   +A  +    
Sbjct: 390 SKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFI 449

Query: 296 GLVNMYAKCGTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
            +++  A  G +++  + F     +F I  ++  ++ MI  L + G   EA  N  A  R
Sbjct: 450 SVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEA-ENLIA--R 506

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
                 +    S L +C + G I L  +   + L+L   S+ +    L ++YA AG    
Sbjct: 507 MPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLE-PSNAAPYVVLSNMYASAGRWEE 565

Query: 411 CLKVFFLMPEH-----DQVSWNSV---IGAFA---DSEALVSEAVKYYLD----MRRAGW 455
              V   M +         SW  V   I  F     S  ++ E  ++  +    M+RAG+
Sbjct: 566 VATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGY 625

Query: 456 SPN 458
            P+
Sbjct: 626 VPD 628



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 12/146 (8%)

Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
           MN + + +QR        F  +L  C +   L  G  +H+  +++ +       +  + +
Sbjct: 1   MNQISWTLQR--------FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILL 52

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
           YSKCGR+ +A + F  +   NV+S+N++I+ YA+      A  LF Q+    P PD V++
Sbjct: 53  YSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQI----PEPDLVSY 108

Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQV 691
             ++SA +  G        F  M ++
Sbjct: 109 NTLISAYADCGETAPALGLFSGMREM 134


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 279/748 (37%), Positives = 408/748 (54%), Gaps = 58/748 (7%)

Query: 233  VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA 292
            VG  L  GF+    FY     F         SMN         + +H  LI++G   +  
Sbjct: 273  VGGLLFLGFSLSSYFYPPLXYFSSTFSD---SMN-----YPNSEVLHAKLIKNGCVGIR- 323

Query: 293  VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
             GN L+N+YAK   ++ +  +F  +   D  SW  +ISG  + G   + +  F  M+  G
Sbjct: 324  -GNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQG 382

Query: 353  LMSSNFSLISTLSSCAS-LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
            +  + F+L   L SC+S +    +G+ IHG  L+ GLD D  ++N++L  Y         
Sbjct: 383  VCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYA 442

Query: 412  LKVFFLMPEHDQVSWNSV------IGAFADSEALVSE----------------------- 442
             K+F LM E D VSWN +      IG    S  L  +                       
Sbjct: 443  EKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCER 502

Query: 443  -AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
             A++    M  AG + N +TF   L  ASS S+  LG Q+H QV+K  V ++  + N+L+
Sbjct: 503  VALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLI 562

Query: 502  SCYGKCGEMDDCEKIFARMSERR--------------DEVSWNSMISGYIHNELLPKAMN 547
              Y KCGEM+    IF  + +                + VSW+SM+SGY+ N     A+ 
Sbjct: 563  DMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALK 622

Query: 548  LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
               FM+     +D FT  +V+SACAS   LE G +VH    +     DV +GS+++DMY 
Sbjct: 623  TFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYV 682

Query: 608  KCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVG 667
            KCG ++ A   F+    RNV  W SMISG A HG G +A+ LF  M  +G  P+ V+FVG
Sbjct: 683  KCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVG 742

Query: 668  VLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPIT 727
            VL+ACSHAGL++EG K+F+ M +VYG+ P  E F+CMVDL GRAG L++I+EFI+   I+
Sbjct: 743  VLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAIS 802

Query: 728  PNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
              S +WR+ L + CR + +  E+G      L E+EP +A  Y+L +++ A+  +WE+ AK
Sbjct: 803  KLSSVWRSFLSS-CRVH-KNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAK 860

Query: 788  ARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQ 847
             R  M++  VKK    SW+ +K+ VH FV GD SHP+   IY  L EL  ++++ GY   
Sbjct: 861  IRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTD 920

Query: 848  TKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISK 906
                + D+E E ++ L+ YHSEK+A+A+ +++     PIR+MKNLRVC DCH+  K+ S+
Sbjct: 921  VTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCIDCHNFIKYASE 980

Query: 907  IVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            ++GREI++RD +RFHHF  G CSC DYW
Sbjct: 981  LLGREIIIRDIHRFHHFKHGHCSCADYW 1008



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 139/561 (24%), Positives = 256/561 (45%), Gaps = 82/561 (14%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           ++++ H +++K+G        N L+N+Y +  +L  A K+F+E+P  +  SW  ++SG+ 
Sbjct: 306 NSEVLHAKLIKNGCVG--IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFA 363

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G+S +   +F +M   G   N++ L  VL++C     +  + G  +H  +L++    D
Sbjct: 364 RIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSS-NVNDSRIGKGIHGWILRNGLDLD 422

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            +++N ++  Y  C      A ++F  +  +D +SWN ++S Y Q GD      LF ++ 
Sbjct: 423 AVLNNSILDYYVKC-RCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLP 481

Query: 183 ---------------REGF-RYSLK---------P--NEYTFG-SLITAAYSSVLSGSYL 214
                          R G  R +L+         P  N+ TF  +L+ A+  SVL    L
Sbjct: 482 GKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLG---L 538

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK 274
            +QI   V K G+L D +V ++L+  + + G    A  IF+ + Q+              
Sbjct: 539 GKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQE-------------- 584

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
                               + ++N    C   DD+          +SVSW++M+SG  Q
Sbjct: 585 --------------------SSMMNSEESC---DDAVV--------ESVSWSSMVSGYVQ 613

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG +E+A+  F  M    +    F+L S +S+CAS G + LG+Q+HG   K+G   DV +
Sbjct: 614 NGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFL 673

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            ++++ +Y   G L+    +F    + + V W S+I   A       EAV+ +  M   G
Sbjct: 674 GSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCA-LHGQGREAVRLFELMINEG 732

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDC 513
            +PN V+F+ +L A S   + + G +    + + Y +         ++  YG+ G +++ 
Sbjct: 733 ITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEI 792

Query: 514 EKIFARMSERRDEVSWNSMIS 534
           ++     +  +    W S +S
Sbjct: 793 KEFIHNNAISKLSSVWRSFLS 813



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 154/370 (41%), Gaps = 63/370 (17%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S+  K  H  IL++G   D  L N++++ YV+      A KLF  M ++++VSW  ++S 
Sbjct: 404 SRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSS 463

Query: 61  YTHKGMSNEACKMFKE-------------------------------MVRAGFLLNRYAL 89
           Y   G   ++  +F++                               MV AG   N+   
Sbjct: 464 YLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTF 523

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
              L         G   G Q+H  VLK     DG V N LI MY  C E  + A  IF+ 
Sbjct: 524 SIALVLASSLSVLG--LGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGE-MEKASVIFKH 580

Query: 150 IETR---------------DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
           +                  + +SW+S++S Y Q G      K FS M        ++ ++
Sbjct: 581 LPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFM----ICSQVEVDK 636

Query: 195 YTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKI 253
           +T  S+++A A + VL    L +Q+   ++K G   D+++GS+++  + + G+   A  I
Sbjct: 637 FTLTSVVSACASAGVLE---LGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLI 693

Query: 254 FEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
           F Q   +NVV    ++ G       R+   +   +I  G+        G++   +  G +
Sbjct: 694 FNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLL 753

Query: 308 DDSRSVFRFM 317
           ++    FR M
Sbjct: 754 EEGCKYFRLM 763


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 268/716 (37%), Positives = 413/716 (57%), Gaps = 19/716 (2%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQM-----IQKNVVSMNGLMEGRRK---GKEVHGY 281
           D+Y  + ++SG+ R GN     + F        +  +  +   +++  R    G ++H  
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCL 175

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
            ++ G    V V   L+++Y++   + ++R +F  M  +D  SWN MISG  Q+G  +EA
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +     +R       + +++S LS+C   G    G  IH   +K GL+S++ VSN L+ L
Sbjct: 236 LTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           YA+ G L  C KVF  M   D +SWNS+I A+  +E  +  A+  + +MR +   P+ +T
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL-RAISLFQEMRLSRIQPDCLT 350

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYN-VANETTIENALLSCYGKCGEMDDCEKIFARM 520
            I++ +  S     +    V    ++      + TI NA++  Y K G +D    +F  +
Sbjct: 351 LISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 410

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASVATLER 579
               D +SWN++ISGY  N    +A+ +   M + G+   +  T+ +VL AC+    L +
Sbjct: 411 PNT-DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           GM++H   ++  L  DV + ++L DMY KCGR++ A   F  +P  N   WN++I+ +  
Sbjct: 470 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGF 529

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
           HGHG+KA+ LF +M  +G  PDH+TFV +LSACSH+GLVDEG   F+ M   YG+ P L+
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            + CMVD+ GRAG+L+   +FI  M + P++ IW  +L A CR +    +LG+ A+  LF
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA-CRVH-GNVDLGKIASEHLF 647

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           E+EP++   +VLL+NMYAS GKWE V + R       ++K  G S + + + V VF  G+
Sbjct: 648 EVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGN 707

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR 879
           ++HP  + +Y +L  L  K++  GYVP  +F L D+E + KE ++  HSE++A+AF L  
Sbjct: 708 QTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIA 767

Query: 880 N-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             +K  IRI KNLRVCGDCHS  KFISKI  REI++RDSNRFHHF +G CSCGDYW
Sbjct: 768 TPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 159/585 (27%), Positives = 273/585 (46%), Gaps = 74/585 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           + AK  H +++      +V +   L+N+Y  +G++A A   FD + +R+  +W  ++SGY
Sbjct: 68  QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGY 127

Query: 62  THKGMSNEACKMFKE-MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
              G S+E  + F   M+ +G   +     SVL+AC+         G ++HCL LK    
Sbjct: 128 GRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID-----GNKIHCLALKFGFM 182

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
           +D  V+  LI +Y S  ++   AR +F+E+  RD+ SWN++IS Y Q G+      L   
Sbjct: 183 WDVYVAASLIHLY-SRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL--- 238

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSS------VLSGSYLLQQILAMVKKAGLLSDLYVG 234
               G R     +  T  SL++A   +      V   SY +        K GL S+L+V 
Sbjct: 239 --SNGLR---AMDSVTVVSLLSACTEAGDFNRGVTIHSYSI--------KHGLESELFVS 285

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------------------- 272
           + L+  +A  G     +K+F++M  ++++S N +++                        
Sbjct: 286 NKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ 345

Query: 273 -------------------RKGKEVHGYLIRSGLF-DMVAVGNGLVNMYAKCGTIDDSRS 312
                              R  + V G+ +R G F + + +GN +V MYAK G +D +R+
Sbjct: 346 PDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARA 405

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF-SLISTLSSCASLG 371
           VF ++   D +SWNT+ISG  QNG   EAI  +  M  +G +++N  + +S L +C+  G
Sbjct: 406 VFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAG 465

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
            +  G ++HG  LK GL  DV V  +L  +Y   G L   L +F+ +P  + V WN++I 
Sbjct: 466 ALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIA 525

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-IKYNV 490
                     +AV  + +M   G  P+ +TF+ +L+A S   +   G      +   Y +
Sbjct: 526 CHG-FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGI 584

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
                    ++  YG+ G+++   K    MS + D   W +++S 
Sbjct: 585 TPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 155/524 (29%), Positives = 256/524 (48%), Gaps = 32/524 (6%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           +  K +H  L+ S     V +   LVN+Y   G +  +R  F  +  +D  +WN MISG 
Sbjct: 68  QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGY 127

Query: 333 DQNGCYEEAIMNFCA-MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
            + G   E I  F   M   GL     +  S L +C +   ++ G +IH   LK G   D
Sbjct: 128 GRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT---VIDGNKIHCLALKFGFMWD 184

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           V V+ +L+ LY+    +     +F  MP  D  SWN++I  +  S     EA+     +R
Sbjct: 185 VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS-GNAKEALTLSNGLR 243

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
               + + VT +++L+A +       G  +H+  IK+ + +E  + N L+  Y + G + 
Sbjct: 244 ----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
           DC+K+F RM   RD +SWNS+I  Y  NE   +A++L   M     + D  T  ++ S  
Sbjct: 300 DCQKVFDRMYV-RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASIL 358

Query: 572 ASVATLERGMEVHACGVRA--CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           + +  +     V    +R    LE D+ IG+A+V MY+K G +D A   F+ +P  +V S
Sbjct: 359 SQLGDIRACRSVQGFTLRKGWFLE-DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVIS 417

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDEGFK-HFKS 687
           WN++ISGYA++G   +A+ +++ M+ +G +  +  T+V VL ACS AG + +G K H + 
Sbjct: 418 WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL 477

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           +    GL   +   + + D+ G+ G L+       ++P   NS+ W T++ AC   +   
Sbjct: 478 LKN--GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRV-NSVPWNTLI-ACHGFHGH- 532

Query: 748 TELGRKAANMLFEM-----EPQNAVNYVLLANMYASG----GKW 782
              G KA  +  EM     +P +     LL+    SG    G+W
Sbjct: 533 ---GEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 150/328 (45%), Gaps = 22/328 (6%)

Query: 13  KHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACK 72
           K  F  D+ + N ++ +Y ++G + SA  +F+ +P+ + +SW  I+SGY   G ++EA +
Sbjct: 377 KGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIE 436

Query: 73  MFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
           M+  M   G +  N+    SVL AC + G    + GM++H  +LK+    D  V   L  
Sbjct: 437 MYNIMEEEGEIAANQGTWVSVLPACSQAG--ALRQGMKLHGRLLKNGLYLDVFVVTSLAD 494

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MYG C    D A  +F +I   + + WN++I+ +   G       LF  M  EG    +K
Sbjct: 495 MYGKCGRLED-ALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG----VK 549

Query: 192 PNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
           P+  TF +L++A   S L   G +  +    M    G+   L     +V  + R G    
Sbjct: 550 PDHITFVTLLSACSHSGLVDEGQWCFEM---MQTDYGITPSLKHYGCMVDMYGRAGQLET 606

Query: 250 ARKIFEQMIQKNVVSMNG--LMEGRRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAK 303
           A K  + M  +   S+ G  L   R  G    G +    LF++     G    L NMYA 
Sbjct: 607 ALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYAS 666

Query: 304 CGT---IDDSRSVFRFMIGKDSVSWNTM 328
            G    +D+ RS+      + +  W++M
Sbjct: 667 AGKWEGVDEIRSIAHGKGLRKTPGWSSM 694


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/664 (39%), Positives = 387/664 (58%), Gaps = 11/664 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G  +H + +  G    + V + LV++Y K   +  +R VF  M  +D+V WNTMI+GL +
Sbjct: 122 GMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVR 181

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N CY++++  F  M   G+   + ++ + L + A +  + +G  I    LKLG   D  V
Sbjct: 182 NCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYV 241

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA---DSEALVSEAVKYYLDMR 451
              L+S+++    +     +F ++ + D VS+N++I  F+   ++E     AVKY+ ++ 
Sbjct: 242 LTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETEC----AVKYFRELL 297

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
            +G   +  T + ++  +S F    L   +    +K     + ++  AL + Y +  E+D
Sbjct: 298 VSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEID 357

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
              ++F   SE+    +WN+MISGY  + L   A++L   MM      +  T  ++LSAC
Sbjct: 358 LARQLFDESSEKT-VAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSAC 416

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           A +  L  G  VH       LE ++ + +AL+DMY+KCG I  AS+ FDL   +N  +WN
Sbjct: 417 AQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWN 476

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           +MI GY  HG+GD+AL LF++M   G  P  VTF+ VL ACSHAGLV EG + F +M   
Sbjct: 477 TMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNK 536

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
           Y + P  E ++CMVD+LGRAG+L+K  EFI KMP+ P   +W T+LGAC     + T L 
Sbjct: 537 YRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIH--KDTNLA 594

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
           R A+  LFE++P N   YVLL+N+Y+    +   A  R+A+K+  + K  GC+ + +   
Sbjct: 595 RVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGT 654

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
            HVFV GD SH +   IY KL+EL  KMR+ GY  +T  AL D+E E KE + + HSEK+
Sbjct: 655 PHVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEKL 714

Query: 872 AVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           A+AF ++T      IRI+KNLRVC DCH+A KFISKI  R IV+RD+NRFHHF DG CSC
Sbjct: 715 AIAFGLITTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGICSC 774

Query: 931 GDYW 934
           GDYW
Sbjct: 775 GDYW 778



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 214/475 (45%), Gaps = 64/475 (13%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +  GF  ++F+ + L+++Y +   +A A K+FD+MPDR++V W  +++G      
Sbjct: 125 LHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCC 184

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            +++ ++FK+MV  G  L+   + +VL A  E      K GM + CL LK    FD  V 
Sbjct: 185 YDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEM--QEVKVGMGIQCLALKLGFHFDDYVL 242

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
             LI+++  C E  D AR +F  I   DL+S+N++IS +S  G+T    K F  +   G 
Sbjct: 243 TGLISVFSKC-EDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQ 301

Query: 187 RYS------LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           R S      L P    FG L            +L   I     K+G +    V +AL + 
Sbjct: 302 RVSSSTMVGLIPVSSPFGHL------------HLACCIQGFCVKSGTILQPSVSTALTTI 349

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------- 274
           ++RL     AR++F++  +K V + N ++ G  +                          
Sbjct: 350 YSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTI 409

Query: 275 ---------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                          GK VH  +    L   + V   L++MYAKCG I ++  +F     
Sbjct: 410 TSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSE 469

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           K++V+WNTMI G   +G  +EA+  F  M   G   S+ + +S L +C+  G +  G +I
Sbjct: 470 KNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEI 529

Query: 380 -HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            H    K  ++        ++ +   AG L + L+    MP E     W +++GA
Sbjct: 530 FHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGA 584



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 204/461 (44%), Gaps = 7/461 (1%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           E H  LIR+G    +A    L       G    +R++F  +   D   +N +I G   + 
Sbjct: 26  ETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSP 85

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
                      ++   L   NF+    +S+        LG  +H   +  G DS++ V++
Sbjct: 86  DASSISFYTHLLKNTTLSPDNFTYAFAISASPDDN---LGMCLHAHAVVDGFDSNLFVAS 142

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           AL+ LY     ++   KVF  MP+ D V WN++I     +     ++V+ + DM   G  
Sbjct: 143 ALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRN-CCYDDSVQVFKDMVAQGVR 201

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
            +  T   +L A +     K+G  +    +K     +  +   L+S + KC ++D    +
Sbjct: 202 LDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLL 261

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F  M  + D VS+N++ISG+  N     A+     ++  GQR+   T   ++   +    
Sbjct: 262 FG-MIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGH 320

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           L     +    V++       + +AL  +YS+   ID A + FD    + V +WN+MISG
Sbjct: 321 LHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISG 380

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           YA+ G  + A++LF +M      P+ VT   +LSAC+  G +  G K    + +   L  
Sbjct: 381 YAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFG-KSVHQLIKSKNLEQ 439

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
            +   + ++D+  + G + +  +  + +    N++ W T++
Sbjct: 440 NIYVSTALIDMYAKCGNISEASQLFD-LTSEKNTVTWNTMI 479



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 53/96 (55%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  I       ++++   LI++Y + G+++ AS+LFD   ++N+V+W  ++ GY   
Sbjct: 426 KSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLH 485

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G  +EA K+F EM+  GF  +     SVL AC   G
Sbjct: 486 GYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAG 521


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 256/665 (38%), Positives = 386/665 (58%), Gaps = 7/665 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC--GTIDDSRSVFRFMIGKDSVSWNTMIS 330
           R   E+H +LI++ L     V   L+   A     ++D + S+FR +   DS ++N MI 
Sbjct: 38  RDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIR 97

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           G        EAI+ F  M  + +    F+    L  C+ L  +  G+QIH   +K G  S
Sbjct: 98  GFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGS 157

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
              V N L+ +YA+ G +    +VF  M E +  +WNS+   +  S     E VK + +M
Sbjct: 158 HGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNW-EEVVKLFHEM 216

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
                  + VT +++L A    +  +LG  ++  V +  +    T+  +L+  Y KCG++
Sbjct: 217 LELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQV 276

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
           D   ++F +M +RRD V+W++MISGY       +A++L   M +     +  T  ++LS+
Sbjct: 277 DTARRLFDQM-DRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSS 335

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
           CA +  LE G  VH    +  ++  V +G+AL+D Y+KCG ++ +   F  MPV+NV SW
Sbjct: 336 CAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSW 395

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
             +I G A +G G KAL  F  M      P+ VTF+GVLSACSHAGLVDEG   F SMS+
Sbjct: 396 TVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSR 455

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
            +G+ P++E + CMVD+LGRAG +++  +FI  MPI PN++IWRT+L A C+ + +  E+
Sbjct: 456 DFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLL-ASCKVH-KNVEI 513

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
           G ++   L  +EP ++ +Y+LL+N+YAS G+WED  K R  MKE  +KK  GCS + +  
Sbjct: 514 GEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDG 573

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
            +H F A D  H + + IY  ++++ ++++ AGYVP T  A  D E + KE  VS+HSEK
Sbjct: 574 VIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDKESSVSHHSEK 633

Query: 871 IAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +A+AF L ++     IRI KNLRVC DCH+A K +SK+  REIV+RD  RFHHF +G CS
Sbjct: 634 LAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHHFKEGSCS 693

Query: 930 CGDYW 934
           C DYW
Sbjct: 694 CNDYW 698



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 210/416 (50%), Gaps = 14/416 (3%)

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNV----------VSMNGLMEGRRKGKEVHGYLIRSG 286
           ++ GF    + + A  +F++M + +V          + +   ++   +G+++H  +++ G
Sbjct: 95  MIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCG 154

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
                 V N L++MYA CG ++ +R VF  M  ++  +WN+M +G  ++G +EE +  F 
Sbjct: 155 FGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFH 214

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
            M    +     +L+S L++C  L  + LG+ I+    + GL  + ++  +L+ +YA  G
Sbjct: 215 EMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCG 274

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
            +    ++F  M   D V+W+++I  ++ + +   EA+  + +M++A   PN +T ++IL
Sbjct: 275 QVDTARRLFDQMDRRDVVAWSAMISGYSQA-SRCREALDLFHEMQKANIDPNEITMVSIL 333

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           ++ +     + G  VH  + K  +    T+  AL+  Y KCG ++   ++F +M   ++ 
Sbjct: 334 SSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMP-VKNV 392

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           +SW  +I G   N    KA+   + M+++    +  TF  VLSAC+    ++ G ++   
Sbjct: 393 LSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVS 452

Query: 587 GVRAC-LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARH 640
             R   +E  +     +VD+  + G I+ A +F   MP++ N   W ++++    H
Sbjct: 453 MSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVH 508



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 204/437 (46%), Gaps = 52/437 (11%)

Query: 39  ASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQE 98
           A  +F ++ + +S ++  ++ G+T K   +EA  +FKEM       + +    +L+ C  
Sbjct: 77  AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136

Query: 99  CGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISW 158
                   G Q+H L++K      G V N LI MY +C E  + ARR+F+E+  R++ +W
Sbjct: 137 L--QALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGE-VEVARRVFDEMSERNVRTW 193

Query: 159 NSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQI 218
           NS+ + Y++ G+   V KLF  M     R+    +E T  S++TA     L+   L + I
Sbjct: 194 NSMFAGYTKSGNWEEVVKLFHEMLELDIRF----DEVTLVSVLTAC--GRLADLELGEWI 247

Query: 219 LAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---- 274
              V++ GL  +  + ++LV  +A+ G    AR++F+QM +++VV+ + ++ G  +    
Sbjct: 248 NRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRC 307

Query: 275 -------------------------------------GKEVHGYLIRSGLFDMVAVGNGL 297
                                                GK VH ++ +  +   V +G  L
Sbjct: 308 REALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTAL 367

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           ++ YAKCG+++ S  VF  M  K+ +SW  +I GL  NG  ++A+  F  M    +  ++
Sbjct: 368 MDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPND 427

Query: 358 FSLISTLSSCASLGWIMLGQQIH-GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
            + I  LS+C+  G +  G+ +        G++  +     ++ +   AG +    +   
Sbjct: 428 VTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIK 487

Query: 417 LMP-EHDQVSWNSVIGA 432
            MP + + V W +++ +
Sbjct: 488 NMPIQPNAVIWRTLLAS 504



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 213/470 (45%), Gaps = 52/470 (11%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST-DCARRIFEEIETRDLISWNSIISVYSQ 167
           ++H  ++K+       V+  L+      L ++ D A  IF +I+  D  ++N +I  ++ 
Sbjct: 42  EIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTL 101

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
           +        LF  M       S++P+E+TF  ++     S L      +QI A++ K G 
Sbjct: 102 KQSPHEAILLFKEMHEN----SVQPDEFTFPCILKVC--SRLQALSEGEQIHALIMKCGF 155

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------- 274
            S  +V + L+  +A  G    AR++F++M ++NV + N +  G  K             
Sbjct: 156 GSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHE 215

Query: 275 ----------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
                                       G+ ++ Y+   GL     +   LV+MYAKCG 
Sbjct: 216 MLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQ 275

Query: 307 IDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
           +D +R +F  M  +D V+W+ MISG  Q     EA+  F  M++  +  +  +++S LSS
Sbjct: 276 VDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSS 335

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSW 426
           CA LG +  G+ +H    K  +   V++  AL+  YA  G +   ++VF  MP  + +SW
Sbjct: 336 CAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSW 395

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
             +I   A S     +A++Y+  M      PN VTFI +L+A S   +   G  +   + 
Sbjct: 396 TVLIQGLA-SNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMS 454

Query: 487 KYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           + +   E  IE+   ++   G+ G +++  +    M  + + V W ++++
Sbjct: 455 R-DFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLA 503



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 231/489 (47%), Gaps = 53/489 (10%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H  I+K GF    F+ NTLI++Y   G++  A ++FDEM +RN  +W  + +GYT
Sbjct: 142 EGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYT 201

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLV----LKSN 118
             G   E  K+F EM+      +   L SVL AC     +  + G  ++  V    LK N
Sbjct: 202 KSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRL--ADLELGEWINRYVEEKGLKGN 259

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
            T   L+++ L+ MY  C +  D ARR+F++++ RD+++W+++IS YSQ         LF
Sbjct: 260 PT---LITS-LVDMYAKCGQ-VDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLF 314

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
             MQ+     ++ PNE T  S++++   +VL      + +   +KK  +   + +G+AL+
Sbjct: 315 HEMQKA----NIDPNEITMVSILSSC--AVLGALETGKWVHFFIKKKRMKLTVTLGTALM 368

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGY---LIRSGLFDMVA 292
             +A+ G+   + ++F +M  KNV+S   L++G     +GK+   Y   ++   +     
Sbjct: 369 DFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDV 428

Query: 293 VGNGLVNMYAKCGTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
              G+++  +  G +D+ R +F      F I      +  M+  L + G  EEA   F  
Sbjct: 429 TFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEA---FQF 485

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK--LGLDSDVSVSNALLS-LYAD 404
           ++   +  +     + L+SC     + +G+    E LK  + L+   S    LLS +YA 
Sbjct: 486 IKNMPIQPNAVIWRTLLASCKVHKNVEIGE----ESLKQLIILEPTHSGDYILLSNIYAS 541

Query: 405 AGYLSRCLKVFFLMPEH--------DQVSWNSVIGAFADSEALVSEAVKYY-------LD 449
            G     LKV   M E           +  + VI  F   + + S++ + Y         
Sbjct: 542 VGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQ 601

Query: 450 MRRAGWSPN 458
           ++ AG+ PN
Sbjct: 602 IKSAGYVPN 610


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 291/885 (32%), Positives = 478/885 (54%), Gaps = 67/885 (7%)

Query: 104 FKFGMQVHCLVLKSNQ-TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSII 162
            + G ++H LV +S + + D ++   +I MY  C  S D +R +F+ +  ++L  WN++I
Sbjct: 97  IQLGRKIHQLVSESARLSNDDVLCTRVITMYSMC-GSPDDSRSVFDALRKKNLFQWNAVI 155

Query: 163 SVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILA-- 220
           S YS+     +V ++F +M  E     L P+ +TF  ++ A      +G   +Q  LA  
Sbjct: 156 SSYSRNELYHNVLEMFVKMITES---GLLPDNFTFPCVVKAC-----AGVSEVQVGLAVH 207

Query: 221 -MVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME--------- 270
            +V K  L+ D++V +ALVS +   G+   A ++F+ M ++N+VS N ++          
Sbjct: 208 GLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSE 267

Query: 271 --------------------------------GRRK----GKEVHGYLIRSGLFDMVAVG 294
                                            R +    GK VHG  ++  L   V V 
Sbjct: 268 ECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVN 327

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG-- 352
           N L++MY+KCG I+D++ +F+    K+ VSWNTM+ G    G   +       M   G  
Sbjct: 328 NALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGD 387

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG-LDSDVSVSNALLSLYADAGYLSRC 411
           L +   ++++ +  C     +   +++H   LK   + ++  V+NA ++ YA  G LS  
Sbjct: 388 LRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYA 447

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
            +VF  +      SWN++IG ++ S      ++  Y  M+ +G  P+  T  ++L+A S 
Sbjct: 448 HRVFCSIRSKTVNSWNALIGGYSQSSD-PRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQ 506

Query: 472 FSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
               KLG +VH  +I+  +  ++ +  +LLS Y  CGE+     +F  M E +  VSWN+
Sbjct: 507 IKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAM-EDKTLVSWNT 565

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC 591
           M++GY+ N    +A++L   M+  G +    +  +V  AC+ + +L  G E H   ++  
Sbjct: 566 MVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCL 625

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
           LE +  I  +++DMY+K G +  + + F+ +  R+V SWN+M+ GY  HG   +A+ LF 
Sbjct: 626 LEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFE 685

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRA 711
           +M+  G  PD +TF+GVL+AC+H+GLV EG  +   M  ++G+ P L+ ++C++D+L RA
Sbjct: 686 EMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRA 745

Query: 712 GELDK-IEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
           G+LD+ ++    +M   P   IW  +L + CR + +  E+G K A  LF  EP+   NYV
Sbjct: 746 GKLDEALKIATEEMSEEPGVGIWNFLLSS-CRIH-KNLEMGEKIAAKLFVSEPEKPENYV 803

Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
           LL+N+YA  GKW++V K R+ MKE  ++K+AGCSW+ +   V  FVAG+ S    + I  
Sbjct: 804 LLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKS 863

Query: 831 KLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMK 889
               L +++   GY P T     DL  E K + +  HSEK+A+ + L R S+   +R+ K
Sbjct: 864 LWSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSEKLAITYGLIRTSEGTTLRVYK 923

Query: 890 NLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           NLR+C DCH+A K ISK++ REIV+RD+ RFHHF +G CSCGDYW
Sbjct: 924 NLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGFCSCGDYW 968



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 174/705 (24%), Positives = 321/705 (45%), Gaps = 58/705 (8%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D  LC  +I +Y   G    +  +FD +  +N   W  ++S Y+   + +   +MF +M+
Sbjct: 116 DDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMI 175

Query: 79  -RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
             +G L + +    V++AC   G S  + G+ VH LV+K+    D  VSN L++ YG+  
Sbjct: 176 TESGLLPDNFTFPCVVKAC--AGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNG 233

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
             +D A R+F+ +  R+L+SWNS+I V+S  G +   F L  +M  +    +  P+  T 
Sbjct: 234 SVSD-ALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATL 292

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            +++         G  + + +  +  K  L  ++ V +AL+  +++ G    A+ IF+  
Sbjct: 293 ATVLPVCARDREIG--VGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLN 350

Query: 258 IQKNVVSMNGLMEGRRKGKEVHGY--LIR---SGLFDMVA-------------------- 292
             KNVVS N ++ G     ++H    L+R   +G  D+ A                    
Sbjct: 351 NNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPN 410

Query: 293 -------------------VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
                              V N  V  YAKCG++  +  VF  +  K   SWN +I G  
Sbjct: 411 LKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYS 470

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           Q+     ++  +  M+  GL+   F++ S LS+C+ +  + LG+++HG  ++  L+ D  
Sbjct: 471 QSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSF 530

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V  +LLSLY   G LS    +F  M +   VSWN+++  +  +      A+  +  M   
Sbjct: 531 VYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQN-GFPERALSLFRQMVLY 589

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G  P  ++ +++  A S     +LG + H   +K  + +   I  +++  Y K G + + 
Sbjct: 590 GVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMES 649

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            K+F  + E R   SWN+M+ GY  +    +A+ L   M + G   D  TF  VL+AC  
Sbjct: 650 FKVFNGLKE-RSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNH 708

Query: 574 VATLERGMEVHACGVRACLEFDVVIG--SALVDMYSKCGRIDYASRFF--DLMPVRNVYS 629
              +  G+  +   ++     +  +   + ++DM  + G++D A +    ++     V  
Sbjct: 709 SGLVHEGL-TYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGI 767

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGP-LPDHVTFVGVLSACS 673
           WN ++S    H + +    + +++ +  P  P++   +  L A S
Sbjct: 768 WNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGS 812



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/440 (32%), Positives = 221/440 (50%), Gaps = 26/440 (5%)

Query: 271 GRRK----GKEVHGYLIRSG-LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
           GRRK    G+++H  +  S  L +   +   ++ MY+ CG+ DDSRSVF  +  K+   W
Sbjct: 92  GRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQW 151

Query: 326 NTMISGLDQNGCYEEAIMNFCAM-RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           N +IS   +N  Y   +  F  M    GL+  NF+    + +CA +  + +G  +HG  +
Sbjct: 152 NAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVV 211

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           K  L  DV VSNAL+S Y   G +S  L+VF +MPE + VSWNS+I  F+D+  L  E  
Sbjct: 212 KTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDN-GLSEECF 270

Query: 445 KYYLDMRRA----GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
                M        ++P+  T   +L   +      +G  VH   +K ++  E  + NAL
Sbjct: 271 LLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNAL 330

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ--R 558
           +  Y KCG ++D + IF +++  ++ VSWN+M+ G+     + K  +L+  M+  G   R
Sbjct: 331 MDMYSKCGCINDAQVIF-KLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLR 389

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEF---DVVIGSALVDMYSKCGRIDYA 615
            D  T    +  C   + L    E+H   ++   EF   + ++ +A V  Y+KCG + YA
Sbjct: 390 ADEVTILNAVPVCFEESVLPNLKELHCYSLKQ--EFVHNNELVANAFVASYAKCGSLSYA 447

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
            R F  +  + V SWN++I GY++      +L  + QMK  G LPD  T   +LSACS  
Sbjct: 448 HRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQ- 506

Query: 676 GLVDEGFKHFKSMSQVYGLI 695
                  K  K   +V+GLI
Sbjct: 507 ------IKSLKLGKEVHGLI 520



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 157/583 (26%), Positives = 267/583 (45%), Gaps = 57/583 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K     DVF+ N L++ Y   G ++ A ++F  MP+RN VSW  ++  ++  G+S
Sbjct: 207 HGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLS 266

Query: 68  NEACKMFKEMVRA----GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            E   +  +M+       F  +   L +VL  C      G   G  VH L +K +   + 
Sbjct: 267 EECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIG--VGKGVHGLAMKLSLDKEV 324

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +V+N L+ MY  C    D A+ IF+    ++++SWN+++  +S  GD    F L  +M  
Sbjct: 325 VVNNALMDMYSKCGCIND-AQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLA 383

Query: 184 EGFRYSLKPNEYTFGSLITAAY-SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            G    L+ +E T  + +   +  SVL    L +     +K+  + ++  V +A V+ +A
Sbjct: 384 GG--GDLRADEVTILNAVPVCFEESVLPN--LKELHCYSLKQEFVHNNELVANAFVASYA 439

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---------------------------- 274
           + G+  YA ++F  +  K V S N L+ G  +                            
Sbjct: 440 KCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCS 499

Query: 275 -------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                        GKEVHG +IR+ L     V   L+++Y  CG +  +  +F  M  K 
Sbjct: 500 LLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKT 559

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            VSWNTM++G  QNG  E A+  F  M   G+     S++S   +C+ L  + LG++ HG
Sbjct: 560 LVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHG 619

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             LK  L+ +  ++ +++ +YA  G +    KVF  + E    SWN+++  +        
Sbjct: 620 YALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYG-IHGRAK 678

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA-L 500
           EA+K + +M+R G  P+ +TF+ +L A +   +   G     Q+      N T    A +
Sbjct: 679 EAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACV 738

Query: 501 LSCYGKCGEMDDCEKIFA-RMSERRDEVSWNSMISG-YIHNEL 541
           +    + G++D+  KI    MSE      WN ++S   IH  L
Sbjct: 739 IDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNL 781



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 151/328 (46%), Gaps = 25/328 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  I+++    D F+  +L+++Y+  G+L++A  LFD M D+  VSW  +V+GY
Sbjct: 511 KLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGY 570

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G    A  +F++MV  G      ++ SV  AC    PS  + G + H   LK     
Sbjct: 571 LQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLL-PS-LRLGREAHGYALKCLLED 628

Query: 122 DGLVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
           +  ++  +I MY   GS +ES     ++F  ++ R + SWN+++  Y   G      KLF
Sbjct: 629 NAFIACSVIDMYAKNGSVMESF----KVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLF 684

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
             MQR G      P+E TF  ++TA   S  V  G   L Q+  +    G+   L   + 
Sbjct: 685 EEMQRTGH----CPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLF---GMNPTLKHYAC 737

Query: 237 LVSGFARLGNFYYARKI-FEQMIQKNVVSM-NGLMEGRRKGKEVH-GYLIRSGLFDMVAV 293
           ++    R G    A KI  E+M ++  V + N L+   R  K +  G  I + LF     
Sbjct: 738 VIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPE 797

Query: 294 GNG----LVNMYAKCGTIDDSRSVFRFM 317
                  L N+YA  G  D+ R V + M
Sbjct: 798 KPENYVLLSNLYAGSGKWDEVRKVRQRM 825


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 284/809 (35%), Positives = 446/809 (55%), Gaps = 58/809 (7%)

Query: 131 AMYGSCLESTDCARRIFEEI----ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           A++ SC+ + +  +++   +    ++++++    +I++Y   GD          + R  F
Sbjct: 27  ALFNSCV-NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDI--------SLSRSTF 77

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSY-----LLQQILAMVKKAGLLSDLYVGSALVSGF 241
            Y  K N +++ S+I+A    V  G Y      + Q+ +M     L  D Y    ++   
Sbjct: 78  DYIHKKNIFSWNSIISAY---VRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC 134

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
             L +                            GK+VH  + + G  D V V   LV++Y
Sbjct: 135 VSLVD----------------------------GKKVHCCVFKMGFEDDVFVAASLVHLY 166

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
           ++ G +D +  VF  M  KD  SWN MISG  QNG    A+     M+ +G+     ++ 
Sbjct: 167 SRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVA 226

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S L  CA    ++ G  IH   LK GLDSDV VSNAL+++Y+  G L     VF  M   
Sbjct: 227 SILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVR 286

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D VSWNS+I A+  +    S A++++  M+  G  P+ +T +++ +  S  S  ++   +
Sbjct: 287 DLVSWNSIIAAYEQNND-PSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSI 345

Query: 482 HAQVIKYN-VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
              VI+   +  +  I NAL++ Y K G M+    +F ++  R+D +SWN++++GY  N 
Sbjct: 346 LGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLP-RKDTISWNTLVTGYTQNG 404

Query: 541 LLPKAMNLVWFMMQ--RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
           L  +A++  + MM+  R    +  T+ +++ A + V  L++GM++HA  ++  L  DV +
Sbjct: 405 LASEAID-AYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFV 463

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            + L+D+Y KCGR++ A   F  +P      WN++I+    HG G++AL LF  M  +  
Sbjct: 464 ATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERV 523

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
             DH+TFV +LSACSH+GLVDEG K F  M + YG+ P L+ + CMVDLLGRAG L+K  
Sbjct: 524 KADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAY 583

Query: 719 EFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYAS 778
           E +  MPI P++ IW  +L AC        ELG  A++ L E++ +N   YVLL+N+YA+
Sbjct: 584 ELVRNMPIQPDASIWGALLSACKIYG--NAELGTLASDRLLEVDSENVGYYVLLSNIYAN 641

Query: 779 GGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQK 838
             KWE V K R   ++  ++K  G S V +     VF  G+++HP+   IY++LK L+ K
Sbjct: 642 TEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAK 701

Query: 839 MRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDC 897
           M+  GYVP   F   D+E + KE +++ HSE++A+AF +++   + PIRI KNLRVCGDC
Sbjct: 702 MKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDC 761

Query: 898 HSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           H+A K+IS+I  REIV+RDSNRFHHF DG
Sbjct: 762 HNATKYISRISEREIVVRDSNRFHHFKDG 790



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 151/587 (25%), Positives = 271/587 (46%), Gaps = 75/587 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  +L  G + ++ L   LIN+YV  GD++ +   FD +  +N  SW  I+S Y  
Sbjct: 38  TKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVR 97

Query: 64  KGMSNEACKMFKEM--------VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVL 115
            G  +EA     ++        +R  F    Y    +L+AC          G +VHC V 
Sbjct: 98  FGKYHEAMNCVNQLFSMCGGGHLRPDF----YTFPPILKAC-----VSLVDGKKVHCCVF 148

Query: 116 KSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVF 175
           K     D  V+  L+ +Y S     D A ++F ++  +D+ SWN++IS + Q G+     
Sbjct: 149 KMGFEDDVFVAASLVHLY-SRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGAL 207

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYV 233
            + +RM+ EG    +K +  T  S++   A    V++G  +   +L    K GL SD++V
Sbjct: 208 GVLNRMKGEG----VKMDTITVASILPVCAQSDDVINGVLIHLHVL----KHGLDSDVFV 259

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------------------- 271
            +AL++ +++ G    A+ +F+QM  +++VS N ++                        
Sbjct: 260 SNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGI 319

Query: 272 -------------------RRKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSR 311
                              +R  + + G++IR    D  V +GN LVNMYAK G ++ + 
Sbjct: 320 RPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAH 379

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR--RDGLMSSNFSLISTLSSCAS 369
           +VF  +  KD++SWNT+++G  QNG   EAI  +  M   RD + +   + +S + + + 
Sbjct: 380 TVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQG-TWVSIIPAYSH 438

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           +G +  G +IH + +K  L  DV V+  L+ LY   G L   + +F+ +P    V WN++
Sbjct: 439 VGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAI 498

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-Y 488
           I +         EA++ + DM       + +TF+++L+A S   +   G +    + K Y
Sbjct: 499 IASLG-IHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEY 557

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
            +         ++   G+ G ++   ++   M  + D   W +++S 
Sbjct: 558 GIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSA 604



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 229/475 (48%), Gaps = 54/475 (11%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D K  H  + K GF  DVF+  +L+++Y R G L  A K+F +MP ++  SW  ++SG+ 
Sbjct: 139 DGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFC 198

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G +  A  +   M   G  ++   + S+L  C +        G+ +H  VLK     D
Sbjct: 199 QNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQS--DDVINGVLIHLHVLKHGLDSD 256

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             VSN LI MY       D A+ +F+++E RDL+SWNSII+ Y Q  D  +  + F  MQ
Sbjct: 257 VFVSNALINMYSKFGRLQD-AQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQ 315

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMV-KKAGLLSDLYVGSALVSGF 241
             G R    P+  T  SL T+ +S  LS   + + IL  V ++  L  D+ +G+ALV+ +
Sbjct: 316 LGGIR----PDLLTVVSL-TSIFSQ-LSDQRISRSILGFVIRREWLDKDVVIGNALVNMY 369

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------------------------- 272
           A+LG    A  +F+Q+ +K+ +S N L+ G                              
Sbjct: 370 AKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTW 429

Query: 273 -------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                        ++G ++H  LI++ L+  V V   L+++Y KCG ++D+ S+F  +  
Sbjct: 430 VSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPR 489

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
             SV WN +I+ L  +G  EEA+  F  M  + + + + + +S LS+C+  G +  GQ+ 
Sbjct: 490 DTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKC 549

Query: 380 HGEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                K  G+   +     ++ L   AGYL +  ++   MP + D   W +++ A
Sbjct: 550 FDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSA 604



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 18/195 (9%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           F  + ++C +V   ++   +HA  +      ++V+ + L+++Y   G I  +   FD + 
Sbjct: 25  FNALFNSCVNVNATKK---LHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81

Query: 624 VRNVYSWNSMISGYARHGHGDKALT----LFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
            +N++SWNS+IS Y R G   +A+     LFS        PD  TF  +L AC    LVD
Sbjct: 82  KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC--VSLVD 139

Query: 680 EGFKH---FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
               H   FK      G    +   + +V L  R G LD   +    MP+  +   W  +
Sbjct: 140 GKKVHCCVFK-----MGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVK-DVGSWNAM 193

Query: 737 LGACCRANCRKTELG 751
           +   C+       LG
Sbjct: 194 ISGFCQNGNAAGALG 208


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 267/715 (37%), Positives = 395/715 (55%), Gaps = 49/715 (6%)

Query: 267 GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
           G +   R G   H     +G    V VGN LV MY++CG++ D+R VF  M   D VSWN
Sbjct: 138 GEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWN 197

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRD-GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           ++I    + G  + A+  F  M  + G    + +L++ L  CAS+G   LG+Q HG  + 
Sbjct: 198 SIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVT 257

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV------IGAFADSEAL 439
             +  ++ V N L+ +YA  G +     VF  MP  D VSWN++      IG F D+  L
Sbjct: 258 SEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRL 317

Query: 440 VSEAVKYYLDMRRAGWS----------------------------PNGVTFINILAAASS 471
             +  +  + M    WS                            PN VT I++L+  +S
Sbjct: 318 FEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCAS 377

Query: 472 FSMGKLGHQVHAQVIKYNV-------ANETTIENALLSCYGKCGEMDDCEKIFARMSER- 523
                 G ++H   IKY +        +E  + N L+  Y KC ++D    +F  +S + 
Sbjct: 378 VGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKE 437

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG--QRLDHFTFATVLSACASVATLERGM 581
           RD V+W  MI GY  +    KA+ L+  M +     R + FT +  L ACAS+A L  G 
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGK 497

Query: 582 EVHACGVRACLE-FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
           ++HA  +R       + + + L+DMY+KCG I  A   FD M  +N  +W S+++GY  H
Sbjct: 498 QIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMH 557

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
           G+G++AL +F +M+  G   D VT + VL ACSH+G++D+G ++F  M   +G+ P  E 
Sbjct: 558 GYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEH 617

Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
           ++C+VDLLGRAG L+     I +MP+ P  ++W  +L +CCR +  K ELG  AA  + E
Sbjct: 618 YACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALL-SCCRIH-GKVELGEYAAKKITE 675

Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           +   N  +Y LL+NMYA+ G+W+DV + R  M+   +KK  GCSWV    G   F  GD+
Sbjct: 676 LASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDK 735

Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTR 879
           +HP    IY+ L +  Q+++D GYVP+T FAL D++ E K+DL+  HSEK+A+A+ +LT 
Sbjct: 736 THPHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTT 795

Query: 880 NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
                IRI KNLRVCGDCH+AF ++S+I+  EI+LRDS+RFHHF +G CSC  YW
Sbjct: 796 PQGAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCKGYW 850



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 187/666 (28%), Positives = 306/666 (45%), Gaps = 78/666 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVSGYT 62
           KL H ++L  G    + L + LI+ Y+ +G L+ A  L    P  D     W  ++  Y 
Sbjct: 45  KLIHQKLLSFGI-LTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYG 103

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
           + G +N+    F  M    +  + Y    V +AC E   S  + G   H L   +    +
Sbjct: 104 NNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEI--SSVRCGDSSHALSRVTGFMSN 161

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V N L+AMY  C   +D AR++F+E+   D++SWNSII  Y++ G      ++FS+M 
Sbjct: 162 VFVGNALVAMYSRCGSLSD-ARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMT 220

Query: 183 RE-GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            E GFR    P++ T  +++    S  +    L +Q       + ++ +++VG+ LV  +
Sbjct: 221 NEFGFR----PDDITLVNVLPPCAS--VGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMY 274

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
           A+ G    A  +F  M  K+VVS N ++ G                             Y
Sbjct: 275 AKFGMMDEANTVFSNMPVKDVVSWNAMVAG-----------------------------Y 305

Query: 302 AKCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           ++ G  +D+  +F  M    I  D V+W+  ISG  Q G   EA+     M   G+  + 
Sbjct: 306 SQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNE 365

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLD-------SDVSVSNALLSLYADAGYLSR 410
            +LIS LS CAS+G +M G++IH   +K  +D        +  V N L+ +YA    +  
Sbjct: 366 VTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDI 425

Query: 411 CLKVF-FLMP-EHDQVSWNSVIGAFAD------SEALVSEAVKYYLDMRRAGWSPNGVTF 462
              +F  L P E D V+W  +IG ++       +  L+SE  +     R     PN  T 
Sbjct: 426 ARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTR-----PNAFTI 480

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETT--IENALLSCYGKCGEMDDCEKIFARM 520
              L A +S +   +G Q+HA  ++ N  N     + N L+  Y KCG++ D   +F  M
Sbjct: 481 SCALVACASLAALSIGKQIHAYALR-NQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNM 539

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
            E ++EV+W S+++GY  +    +A+ +   M + G +LD  T   VL AC+    +++G
Sbjct: 540 ME-KNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598

Query: 581 MEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMIS 635
           ME      R   +F V  G    + LVD+  + GR++ A R  + MP+      W +++S
Sbjct: 599 MEYFN---RMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLS 655

Query: 636 GYARHG 641
               HG
Sbjct: 656 CCRIHG 661



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 157/317 (49%), Gaps = 9/317 (2%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           +  C ++  + L   IH + L  G+ + +++++ L+S Y   G LS  + +    P  D 
Sbjct: 35  IHKCKTISQVKL---IHQKLLSFGILT-LNLTSHLISTYISLGCLSHAVSLLRRFPPSDA 90

Query: 424 --VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
               WNS+I ++ ++    ++ +  +  M    W+P+  TF  +  A    S  + G   
Sbjct: 91  GVYHWNSLIRSYGNN-GRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSS 149

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           HA        +   + NAL++ Y +CG + D  K+F  M    D VSWNS+I  Y     
Sbjct: 150 HALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVW-DVVSWNSIIESYAKLGK 208

Query: 542 LPKAMNLVWFMMQR-GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
              A+ +   M    G R D  T   VL  CASV T   G + H   V + +  ++ +G+
Sbjct: 209 PKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGN 268

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
            LVDMY+K G +D A+  F  MPV++V SWN+M++GY++ G  + A+ LF QM+ +    
Sbjct: 269 CLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKM 328

Query: 661 DHVTFVGVLSACSHAGL 677
           D VT+   +S  +  GL
Sbjct: 329 DVVTWSAAISGYAQRGL 345



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 120/248 (48%), Gaps = 4/248 (1%)

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV-SWNSMISGYIHN 539
           +H +++ + +     + + L+S Y   G +     +  R       V  WNS+I  Y +N
Sbjct: 47  IHQKLLSFGILT-LNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNN 105

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
               K ++    M       D++TF  V  AC  ++++  G   HA         +V +G
Sbjct: 106 GRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVG 165

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD-GP 658
           +ALV MYS+CG +  A + FD MPV +V SWNS+I  YA+ G    AL +FS+M  + G 
Sbjct: 166 NALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGF 225

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
            PD +T V VL  C+  G    G K F   +    +I  +   +C+VD+  + G +D+  
Sbjct: 226 RPDDITLVNVLPPCASVGTRSLG-KQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEAN 284

Query: 719 EFINKMPI 726
              + MP+
Sbjct: 285 TVFSNMPV 292



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 204/471 (43%), Gaps = 81/471 (17%)

Query: 14  HGFAY------DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           HGFA       ++F+ N L+++Y + G +  A+ +F  MP ++ VSW  +V+GY+  G  
Sbjct: 252 HGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRF 311

Query: 68  NEACKMF-----------------------------------KEMVRAGFLLNRYALGSV 92
            +A ++F                                   ++M+ +G   N   L SV
Sbjct: 312 EDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISV 371

Query: 93  LRACQECGPSGFKFGMQVHCLVLKSNQTF-------DGLVSNVLIAMYGSCLESTDCARR 145
           L  C   G      G ++HC  +K            + +V N LI MY  C +  D AR 
Sbjct: 372 LSGCASVG--ALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKC-KKVDIARA 428

Query: 146 IFEEI--ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           +F+ +  + RD+++W  +I  YSQ GD     +L S M  E  +   +PN +T    + A
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ--TRPNAFTISCALVA 486

Query: 204 AYSSVLSGSYLLQQILA-MVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
             S  L+   + +QI A  ++       L+V + L+  +A+ G+   AR +F+ M++KN 
Sbjct: 487 CAS--LAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNE 544

Query: 263 VSMNGLMEGRRKGKEVHGYLIRS-GLF-DMVAVG------NGLVNMYA--KCGTIDDSRS 312
           V+   LM     G  +HGY   + G+F +M  +G        LV +YA    G ID    
Sbjct: 545 VTWTSLM----TGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600

Query: 313 VFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
            F  M     VS     +  ++  L + G    A+     M  +         ++ LS C
Sbjct: 601 YFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPME---PPPVVWVALLSCC 657

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
              G + LG+    +  +L  ++D S +  L ++YA+AG      ++  LM
Sbjct: 658 RIHGKVELGEYAAKKITELASNNDGSYT-LLSNMYANAGRWKDVTRIRSLM 707



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 151/347 (43%), Gaps = 36/347 (10%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVSGYTHK 64
           + + + K+G   +  + N LI++Y +   +  A  +FD +   +R+ V+W  ++ GY+  
Sbjct: 394 YPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQH 453

Query: 65  GMSNEACKMFKEMVRAGFLL--NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
           G +N+A ++  EM         N + +   L AC     +    G Q+H   L++ Q   
Sbjct: 454 GDANKALELLSEMFEEDCQTRPNAFTISCALVACASL--AALSIGKQIHAYALRNQQNAV 511

Query: 123 GL-VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
            L VSN LI MY  C +  D AR +F+ +  ++ ++W S+++ Y   G       +F  M
Sbjct: 512 PLFVSNCLIDMYAKCGDIGD-ARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEM 570

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVG------S 235
           +R GF+           +L+   Y+   SG  ++ Q +    +  + +D  V       +
Sbjct: 571 RRIGFKLDGV-------TLLVVLYACSHSG--MIDQGMEYFNR--MKTDFGVSPGPEHYA 619

Query: 236 ALVSGFARLGNFYYARKIFEQMIQK--NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAV 293
            LV    R G    A ++ E+M  +   VV +  L   R  GK   G      + ++ + 
Sbjct: 620 CLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASN 679

Query: 294 GNG----LVNMYAKCGTIDDS---RSVFRF--MIGKDSVSWNTMISG 331
            +G    L NMYA  G   D    RS+ R   +  +   SW   I G
Sbjct: 680 NDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKG 726



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 4/142 (2%)

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRN--VYSWNSMISGYARHGHGDKALTLFSQMKL 655
           + S L+  Y   G + +A       P  +  VY WNS+I  Y  +G  +K L+ F  M  
Sbjct: 61  LTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHS 120

Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD 715
               PD+ TF  V  AC     V  G     ++S+V G +  +   + +V +  R G L 
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCG-DSSHALSRVTGFMSNVFVGNALVAMYSRCGSLS 179

Query: 716 KIEEFINKMPITPNSLIWRTVL 737
              +  ++MP+  + + W +++
Sbjct: 180 DARKVFDEMPVW-DVVSWNSII 200


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 285/815 (34%), Positives = 440/815 (53%), Gaps = 80/815 (9%)

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL--LSDLYVGSALVSGFARLGNFYY 249
           P+ + F +++ A   + +   YL +QI A V K G    S + + + LV+ + + G    
Sbjct: 8   PDNFAFPAVLKAV--AGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGD 65

Query: 250 ARKIFEQMIQKNVVSMNG---------------------LMEG----------------- 271
           A K+F+++ +++ VS N                      LMEG                 
Sbjct: 66  AYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSN 125

Query: 272 -RRK-----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
            R++     GK++HG   R G +   +  N L+ MYAK G +DD++S+      +D V+W
Sbjct: 126 LRKRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLFEDRDLVTW 184

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N+MIS   QN  + EA+M    M  +G+     +  S L +C+ L  +  G++IH   L+
Sbjct: 185 NSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALR 244

Query: 386 LG-LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
              +  +  V +AL+ +Y + G +     VF  + +     WN++I  +A SE    +A+
Sbjct: 245 TDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEH-DEKAL 303

Query: 445 KYYLDMRRA-GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
             +++M  A G   N  T  +I+ A            +H  VIK  +     ++NAL+  
Sbjct: 304 MLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDM 363

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ------ 557
           Y + G++   ++IF  M E RD VSWN++I+ Y+       A+ L+   MQR +      
Sbjct: 364 YSRMGDIKTSKRIFDSM-EDRDIVSWNTIITSYVICGRSSDAL-LLLHEMQRIEEKSTYD 421

Query: 558 -----------RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMY 606
                      + +  T  TVL  CAS++ L +G E+HA  +R  L   V +GSALVDMY
Sbjct: 422 GDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMY 481

Query: 607 SKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-----PD 661
           +KCG ++ A R FD MP+RNV +WN +I  Y  HG G ++L LF  M  +G       P 
Sbjct: 482 AKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPT 541

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            VTF+ + ++CSH+G+VDEG   F  M   +G+ P  + ++C+VDL+GRAG++++    +
Sbjct: 542 EVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLV 601

Query: 722 NKMPITPNSL-IWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           N MP   + +  W ++LGAC        E+G  AA  L +++P  A +YVLL+N+Y+S G
Sbjct: 602 NTMPSGFDKVGAWSSLLGAC--RIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAG 659

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
            W+     R+ MK   VKKE GCSW+   D VH F+AGD SHP+ + +++ L+ L+++++
Sbjct: 660 LWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLK 719

Query: 841 DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHS 899
             GYVP T   L D++ E KE ++  HSEK+A+AF +L       IR+ KNLRVC DCH+
Sbjct: 720 KEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHT 779

Query: 900 AFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           A KFISKI  REI+LRD+ RFHHF DG CSCGDYW
Sbjct: 780 ASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 164/606 (27%), Positives = 275/606 (45%), Gaps = 92/606 (15%)

Query: 4   AKLFHLQILKHGFAY--DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
            K  H  + K G+     V + NTL+N+Y + G L  A K+FD + +R+ VSW  I+S  
Sbjct: 29  GKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISAL 88

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGP-SGFKFGMQVH-CLVLKSN- 118
                   A K F+ M+  GF  + + L S+  AC       G   G Q+H C   K + 
Sbjct: 89  CRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHW 148

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
           +TF    +N L+AMY   L   D A+ +    E RDL++WNS+IS +SQ    +      
Sbjct: 149 RTFS---NNALMAMYAK-LGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFL 204

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILA-MVKKAGLLSDLYVGSAL 237
             M  EG    +KP+  TF S++ A   S L      ++I A  ++   ++ + +VGSAL
Sbjct: 205 RLMVLEG----VKPDGVTFASVLPAC--SHLDLLRTGKEIHAYALRTDDVIENSFVGSAL 258

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLM---------------------------- 269
           V  +   G     R +F+ ++ + +   N ++                            
Sbjct: 259 VDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSN 318

Query: 270 --------------EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                         EG  + + +HGY+I+ GL     + N L++MY++ G I  S+ +F 
Sbjct: 319 ATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFD 378

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR-------DG---------LMSSNFS 359
            M  +D VSWNT+I+     G   +A++    M+R       DG            ++ +
Sbjct: 379 SMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSIT 438

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           L++ L  CASL  +  G++IH   ++  L S V+V +AL+ +YA  G L+   +VF  MP
Sbjct: 439 LMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMP 498

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW-----SPNGVTFINILAAASSFSM 474
             + ++WN +I A+        E+++ + DM   G       P  VTFI + A+ S   M
Sbjct: 499 IRNVITWNVIIMAYG-MHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGM 557

Query: 475 GKLGHQVHAQVIKYNVANETTIENA------LLSCYGKCGEMDDCEKIFARMSERRDEV- 527
              G  +      + + NE  IE A      ++   G+ G++++   +   M    D+V 
Sbjct: 558 VDEGLSLF-----HKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVG 612

Query: 528 SWNSMI 533
           +W+S++
Sbjct: 613 AWSSLL 618



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 198/398 (49%), Gaps = 22/398 (5%)

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD--SDVSVSNALLSLYADAGYLS 409
           G    NF+  + L + A +  + LG+QIH    K G    S V++ N L+++Y   G L 
Sbjct: 5   GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLG 64

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
              KVF  + E DQVSWNS+I A    E     A+K +  M   G+ P+  T +++  A 
Sbjct: 65  DAYKVFDRITERDQVSWNSIISALCRFEEW-EVAIKAFRLMLMEGFEPSSFTLVSMALAC 123

Query: 470 SSFSMGK---LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           S+        LG Q+H    +      T   NAL++ Y K G +DD + +   + E RD 
Sbjct: 124 SNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLV-LFEDRDL 181

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           V+WNSMIS +  NE   +A+  +  M+  G + D  TFA+VL AC+ +  L  G E+HA 
Sbjct: 182 VTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAY 241

Query: 587 GVRACLEFDVV----IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
            +R     DV+    +GSALVDMY  CG+++     FD +  R +  WN+MI+GYA+  H
Sbjct: 242 ALRT---DDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEH 298

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY---GLIPQLE 699
            +KAL LF +M+    L  + T    +S+   A +  EG    + +       GL     
Sbjct: 299 DEKALMLFIEMEAAAGLYSNAT---TMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRY 355

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
             + ++D+  R G++   +   + M    + + W T++
Sbjct: 356 LQNALIDMYSRMGDIKTSKRIFDSME-DRDIVSWNTII 392



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 176/369 (47%), Gaps = 32/369 (8%)

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTIENALLSCYGKCGEM 510
           +G+SP+   F  +L A +      LG Q+HA V K  Y   +  TI+N L++ YGKCG +
Sbjct: 4   SGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGL 63

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
            D  K+F R++E RD+VSWNS+IS     E    A+     M+  G     FT  ++  A
Sbjct: 64  GDAYKVFDRITE-RDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALA 122

Query: 571 CASVAT---LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           C+++     L  G ++H C  R    +     +AL+ MY+K GR+D A     L   R++
Sbjct: 123 CSNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDL 181

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            +WNSMIS ++++    +AL     M L+G  PD VTF  VL ACSH  L+  G +    
Sbjct: 182 VTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAY 241

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
             +   +I      S +VD+    G+++      + + +     +W  ++     A   +
Sbjct: 242 ALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSV-LDRKIGLWNAMI-----AGYAQ 295

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
           +E   KA  +  EME          A +Y++       A    ++  A V+    C  ++
Sbjct: 296 SEHDEKALMLFIEMEAA--------AGLYSN-------ATTMSSIVPAYVR----CEGIS 336

Query: 808 MKDGVHVFV 816
            K+G+H +V
Sbjct: 337 RKEGIHGYV 345



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 198/438 (45%), Gaps = 67/438 (15%)

Query: 21  FLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM-VR 79
           F+ + L+++Y   G + S   +FD + DR    W  +++GY       +A  +F EM   
Sbjct: 253 FVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAA 312

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
           AG   N   + S++ A   C     K G  +H  V+K     +  + N LI MY S +  
Sbjct: 313 AGLYSNATTMSSIVPAYVRCEGISRKEG--IHGYVIKRGLETNRYLQNALIDMY-SRMGD 369

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR------------EGFR 187
              ++RIF+ +E RD++SWN+II+ Y   G +     L   MQR            +  +
Sbjct: 370 IKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQ 429

Query: 188 YSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
              KPN  T  +++   A+ S++  G    ++I A   +  L S + VGSALV  +A+ G
Sbjct: 430 VPFKPNSITLMTVLPGCASLSALAKG----KEIHAYAIRNLLASQVTVGSALVDMYAKCG 485

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGLF-DMVAVGN------ 295
               AR++F+QM  +NV++ N ++       KGKE         LF DMVA G       
Sbjct: 486 CLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKE------SLELFEDMVAEGAKGGEVK 539

Query: 296 ----GLVNMYAKC---GTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEA-- 341
                 + ++A C   G +D+  S+F  M  +  +      +  ++  + + G  EEA  
Sbjct: 540 PTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYG 599

Query: 342 IMNFCAMRRDGLMSSNFSLI----STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
           ++N         M S F  +    S L +C     I +G +I  E L L L  DV+    
Sbjct: 600 LVN--------TMPSGFDKVGAWSSLLGACRIYHNIEIG-EIAAENL-LQLQPDVASHYV 649

Query: 398 LLS-LYADAGYLSRCLKV 414
           LLS +Y+ AG   + + +
Sbjct: 650 LLSNIYSSAGLWDKAMNL 667



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 10/129 (7%)

Query: 552 MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF------DVVIGSALVDM 605
           M+  G   D+F F  VL A A +  L  G ++HA       +F       V I + LV+M
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHA----HVFKFGYGSFSSVTIDNTLVNM 56

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
           Y KCG +  A + FD +  R+  SWNS+IS   R    + A+  F  M ++G  P   T 
Sbjct: 57  YGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTL 116

Query: 666 VGVLSACSH 674
           V +  ACS+
Sbjct: 117 VSMALACSN 125


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 255/661 (38%), Positives = 385/661 (58%), Gaps = 6/661 (0%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G  VHGYL++ G     AV N L++ YAK   I+D+  VF  M  +D +SWN++I G   
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG Y++A+  F  M  +G    + +L+S + +C    +  +G  +HG  ++ GL S+ S+
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            NALL +Y++        K+F  M + + VSW ++I ++  +     +    + +M   G
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRA-GHFDKVAGLFQEMGLEG 181

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             P+     + L A +     K G  VH   I+  +     + NAL+  Y KCG M++  
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEAR 241

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
            IF  ++ ++D +SWN++I GY  + L  +A  L   M+ +  R +  T A +L A AS+
Sbjct: 242 FIFDHVT-KKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASL 299

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
           ++LERG E+HA  VR     D  + +ALVDMY KCG +  A R FD++  +N+ SW  MI
Sbjct: 300 SSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMI 359

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
           +GY  HG G  A+ LF QMK  G  PD  +F  +L ACSH+GL DEG++ F +M   + +
Sbjct: 360 AGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRI 419

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
            P+L+ ++CMVDLL   G L +  EFI  MPI P+S IW ++L   CR + R  +L  K 
Sbjct: 420 EPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRG-CRIH-RNVKLAEKV 477

Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
           A M+FE+EP+N   YVLLAN+YA   +WE V K +  +    +++  GCSW+ ++   H+
Sbjct: 478 AEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHI 537

Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVA 874
           F A + +HP+   I E L ++ ++M++ G+ P+ K+AL   +    ++ +  HS K+AVA
Sbjct: 538 FFAENRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAVA 597

Query: 875 F-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
           F VL  +   PIR+ KN RVC  CH A KFISK+ GREI+LRDSNRFHHF +G+CSC  Y
Sbjct: 598 FGVLNLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEEGRCSCRGY 657

Query: 934 W 934
           W
Sbjct: 658 W 658



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 160/308 (51%), Gaps = 3/308 (0%)

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
           M G  +HG  +K G  +  +V NAL+S YA +  +   L VF  MP+ D +SWNS+IG  
Sbjct: 1   MDGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGC 60

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE 493
           A S  L  +AV+ ++ M   G   +  T ++++ A        +G  VH   ++  + +E
Sbjct: 61  A-SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISE 119

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM 553
           T++ NALL  Y  C +     KIF  M E+++ VSW +MI+ Y       K   L   M 
Sbjct: 120 TSLGNALLDMYSNCSDWRSTNKIFRNM-EQKNVVSWTAMITSYTRAGHFDKVAGLFQEMG 178

Query: 554 QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID 613
             G R D F   + L A A   +L+ G  VH   +R  +E  + + +AL++MY KCG ++
Sbjct: 179 LEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYME 238

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
            A   FD +  ++  SWN++I GY+R    ++A TLF++M L    P+ VT   +L A +
Sbjct: 239 EARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAA 297

Query: 674 HAGLVDEG 681
               ++ G
Sbjct: 298 SLSSLERG 305



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 192/415 (46%), Gaps = 61/415 (14%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D  + H  ++K+GF     +CN LI+ Y +   +  A  +FDEMP R+ +SW  I+ G  
Sbjct: 2   DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCA 61

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKF-GMQVHCLVLKSNQTF 121
             G+ ++A ++F  M   G  L+   L SV+ AC +   S + F G  VH   +++    
Sbjct: 62  SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQ---SHYSFIGGVVHGYSVRTGLIS 118

Query: 122 DGLVSNVLIAMYGSCLE--STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           +  + N L+ MY +C +  ST+   +IF  +E ++++SW ++I+ Y++ G    V  LF 
Sbjct: 119 ETSLGNALLDMYSNCSDWRSTN---KIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQ 175

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVGSA 236
            M  EG R    P+ +   S + A      +G+  L+    +     + G+   L V +A
Sbjct: 176 EMGLEGIR----PDVFAITSALDA-----FAGNESLKHGKSVHGYAIRNGIEEVLPVANA 226

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------ 272
           L+  + + G    AR IF+ + +K+ +S N L+ G                         
Sbjct: 227 LMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRPNA 286

Query: 273 ----------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                            +G+E+H Y +R G  +   V N LV+MY KCG +  +R +F  
Sbjct: 287 VTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDM 346

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           +  K+ +SW  MI+G   +G   +AI  F  M+  G+     S  + L +C+  G
Sbjct: 347 LTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSG 401



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 211/480 (43%), Gaps = 69/480 (14%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G+ VH  ++K        V N LI+ Y       D A  +F+E+  RD+ISWNSII   +
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIED-ALMVFDEMPQRDIISWNSIIGGCA 61

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG-SYLLQQILAMVKKA 225
             G      +LF RM  EG        E    +L++   + V S  S++   +     + 
Sbjct: 62  SNGLYDKAVELFVRMWLEG-------QELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRT 114

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM---------------- 269
           GL+S+  +G+AL+  ++   ++    KIF  M QKNVVS   ++                
Sbjct: 115 GLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLF 174

Query: 270 -------------------------EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
                                    E  + GK VHGY IR+G+ +++ V N L+ MY KC
Sbjct: 175 QEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKC 234

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G ++++R +F  +  KD++SWNT+I G  ++    EA   F  M    L  +  ++   L
Sbjct: 235 GYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACIL 293

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            + ASL  +  G+++H   ++ G   D  V+NAL+ +Y   G L    ++F ++   + +
Sbjct: 294 PAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLI 353

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           SW  +I  +        +A+  +  M+ +G  P+  +F  IL A S   +   G +    
Sbjct: 354 SWTIMIAGYG-MHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRF--- 409

Query: 485 VIKYN-VANETTIENAL--------LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
              +N + NE  IE  L        L C+   G + +  +    M    D   W S++ G
Sbjct: 410 ---FNAMRNEHRIEPKLKHYACMVDLLCH--TGNLKEAYEFIETMPIEPDSSIWVSLLRG 464



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 8/208 (3%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H   +++G    + + N L+ +YV+ G +  A  +FD +  ++++SW  ++ GY
Sbjct: 203 KHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGY 262

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +   ++NEA  +F EM+      N   +  +L A      S  + G ++H   ++     
Sbjct: 263 SRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASL--SSLERGREMHAYAVRRGYLE 319

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V+N L+ MY  C  +   ARR+F+ +  ++LISW  +I+ Y   G       LF +M
Sbjct: 320 DNFVANALVDMYVKC-GALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQM 378

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVL 209
           +  G    ++P+  +F +++ A   S L
Sbjct: 379 KGSG----IQPDAGSFSAILYACSHSGL 402



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 2/101 (1%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   ++ G+  D F+ N L+++YV+ G L  A +LFD + ++N +SW  +++GY   G  
Sbjct: 309 HAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRG 368

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKF 106
            +A  +F++M  +G   +  +  ++L AC   G    G++F
Sbjct: 369 RDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRF 409


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 263/666 (39%), Positives = 387/666 (58%), Gaps = 8/666 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG--KDSVSWNTMIS 330
           +   ++H  +I +    +  + N L+N+YAKCG ++ +  +F       K  V+W ++I+
Sbjct: 159 KHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLIT 218

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
            L     + +A+  F  MR  G   + F+  S LS+ A+   ++ GQQ+H    K G D+
Sbjct: 219 HLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDA 278

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD- 449
           ++ V  AL+ +YA    +   ++VF  MPE + VSWNS+I  F  +  L   AV  + D 
Sbjct: 279 NIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNN-LYDRAVGVFKDV 337

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           +R     PN V+  ++L+A ++      G QVH  V+KY +   T + N+L+  Y KC  
Sbjct: 338 LREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRF 397

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
            D+  K+F  + +R D V+WN ++ G++ N+   +A N  W M + G   D  +F+TVL 
Sbjct: 398 FDEGVKLFQCVGDR-DVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLH 456

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           + AS+A L +G  +H   ++     ++ I  +L+ MY+KCG +  A + F+ +   NV S
Sbjct: 457 SSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVIS 516

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           W +MIS Y  HG  ++ + LF  M  +G  P HVTFV VLSACSH G V+EG  HF SM 
Sbjct: 517 WTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMK 576

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
           +++ + P  E ++CMVDLLGRAG LD+ + FI  MP+ P   +W  +LGAC +    K  
Sbjct: 577 KIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLK-- 634

Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMK 809
           +GR+AA  LFEMEP N  NYVLLANM    G+ E+  + R+ M    V+KE GCSW+ +K
Sbjct: 635 MGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVK 694

Query: 810 DGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSE 869
           +   VF A D SH   D IY+ L++L + ++  GYV +T+F    LE   +E  + YHSE
Sbjct: 695 NMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSE 754

Query: 870 KIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKC 928
           K+A+AF +LT     PIRI KNLR CG CH+  K  SKI  REI++RD NRFH F DG C
Sbjct: 755 KLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFC 814

Query: 929 SCGDYW 934
           SCGDYW
Sbjct: 815 SCGDYW 820



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 231/477 (48%), Gaps = 57/477 (11%)

Query: 104 FKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE--EIETRDLISWNSI 161
            K   Q+H  ++ +N T    + N LI +Y  C    + A  +F       + +++W S+
Sbjct: 158 LKHATQIHTQIIINNYTSLPFLFNNLINLYAKC-GCLNQALLLFSITHHHFKTIVTWTSL 216

Query: 162 ISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQIL 219
           I+  S     +    LF++M+  G      PN++TF S+++A+ ++  VL G    QQ+ 
Sbjct: 217 ITHLSHFNMHLQALSLFNQMRCSG----PYPNQFTFSSILSASAATMMVLHG----QQLH 268

Query: 220 AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-------- 271
           +++ K G  ++++VG+ALV  +A+  + + A ++F+QM ++N+VS N ++ G        
Sbjct: 269 SLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYD 328

Query: 272 ----------RRK------------------------GKEVHGYLIRSGLFDMVAVGNGL 297
                     R K                        G++VHG +++ GL  +  V N L
Sbjct: 329 RAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSL 388

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           ++MY KC   D+   +F+ +  +D V+WN ++ G  QN  +EEA   F  MRR+G++   
Sbjct: 389 MDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDE 448

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
            S  + L S ASL  +  G  IH + +KLG   ++ +  +L+++YA  G L    +VF  
Sbjct: 449 ASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEG 508

Query: 418 MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
           + +H+ +SW ++I A+       ++ ++ +  M   G  P+ VTF+ +L+A S     + 
Sbjct: 509 IEDHNVISWTAMISAY-QLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEE 567

Query: 478 GHQVHAQVIKYNVANETTIENA-LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           G      + K +  N      A ++   G+ G +D+ ++    M  +     W +++
Sbjct: 568 GLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALL 624



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 210/477 (44%), Gaps = 55/477 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVS 59
           K A   H QI+ + +    FL N LIN+Y + G L  A  LF       +  V+W  +++
Sbjct: 159 KHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLIT 218

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
             +H  M  +A  +F +M  +G   N++   S+L A           G Q+H L+ K   
Sbjct: 219 HLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSA--SAATMMVLHGQQLHSLIHKHGF 276

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             +  V   L+ MY  C +    A R+F+++  R+L+SWNS+I  +           +F 
Sbjct: 277 DANIFVGTALVDMYAKCAD-MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFK 335

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            + RE    ++ PNE +  S+++A  +  + G    +Q+  +V K GL+   YV ++L+ 
Sbjct: 336 DVLREK---TVIPNEVSVSSVLSACAN--MGGLNFGRQVHGVVVKYGLVPLTYVMNSLMD 390

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RR--------- 273
            + +   F    K+F+ +  ++VV+ N L+ G                 RR         
Sbjct: 391 MYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEAS 450

Query: 274 ---------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                          +G  +H  +I+ G    + +   L+ MYAKCG++ D+  VF  + 
Sbjct: 451 FSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIE 510

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
             + +SW  MIS    +GC  + I  F  M  +G+  S+ + +  LS+C+  G +  G  
Sbjct: 511 DHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLA 570

Query: 379 IHGEGLKLGLDSDVSVSN--ALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
            H   +K   D +    +   ++ L   AG+L    +    MP     S W +++GA
Sbjct: 571 -HFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGA 626


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 292/797 (36%), Positives = 430/797 (53%), Gaps = 103/797 (12%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A R+F  +  R   ++N++++ YS  G       LF  + R        P+ Y++ +L+ 
Sbjct: 57  AERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR--------PDNYSYNTLLH 108

Query: 203 A-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
           A A SS L+ +  L   +        + D    + ++S  A  G    AR  F+   +K+
Sbjct: 109 ALAVSSSLADARGLFDEMP-------VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKD 161

Query: 262 VVSMNGLMEGR-RKGK--EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
            VS NG++    R G+  E  G       +D+++  N L++ Y + G + ++R +F  M 
Sbjct: 162 AVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVIS-WNALMSGYVQWGKMSEARELFDRMP 220

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
           G+D VSWN M+SG  + G   EA       RR             L   A +        
Sbjct: 221 GRDVVSWNIMVSGYARRGDMVEA-------RR-------------LFDAAPV-------- 252

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
                       DV    A++S YA  G L    +VF  MPE + VSWN+++ A+     
Sbjct: 253 -----------RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRR- 300

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
           ++ EA + +                N++                      NVA+     N
Sbjct: 301 MMDEAKELF----------------NMMPC-------------------RNVASW----N 321

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
            +L+ Y + G +++ + +F  M ++ D VSW +M++ Y       + + L   M + G+ 
Sbjct: 322 TMLTGYAQAGMLEEAKAVFDTMPQK-DAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 380

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
           ++   FA VLS CA +A LE GM++H   +RA       +G+AL+ MY KCG ++ A   
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 440

Query: 619 FDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLV 678
           F+ M  R+V SWN+MI+GYARHG G +AL +F  M+     PD +T VGVL+ACSH+GLV
Sbjct: 441 FEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 500

Query: 679 DEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
           ++G  +F SM   +G+  + E ++CM+DLLGRAG L +  + +  MP  P+S +W  +LG
Sbjct: 501 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLG 560

Query: 739 ACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVK 798
           A  R + R  ELGR AA  +FE+EP+NA  YVLL+N+YAS GKW D  K R  M+E  VK
Sbjct: 561 A-SRIH-RNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVK 618

Query: 799 KEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPE 858
           K  G SW+ +++ VH F AGD  HPEK+ IY  L++L+ +M+ AGYV  T   L D+E E
Sbjct: 619 KVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEE 678

Query: 859 SKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDS 917
            KE ++ YHSEK+AVA+ +L      PIR++KNLRVCGDCH+AFK+IS I GR I+LRDS
Sbjct: 679 EKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDS 738

Query: 918 NRFHHFNDGKCSCGDYW 934
           NRFHHF  G CSCGDYW
Sbjct: 739 NRFHHFRGGSCSCGDYW 755



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 143/553 (25%), Positives = 245/553 (44%), Gaps = 68/553 (12%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +V   N  I  ++R G +A A +LF  MP R++ ++  +++GY+  G    A  +F+ + 
Sbjct: 37  EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGM--------QVHCLVLKSNQTFDGLVS---- 126
           R     + Y+  ++L A           G+         V   V+ S+    GLVS    
Sbjct: 97  RP----DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARH 152

Query: 127 -------------NVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD 170
                        N ++A Y   G   E    AR +F      D+ISWN+++S Y Q G 
Sbjct: 153 YFDLAPEKDAVSWNGMLAAYVRNGRVEE----ARGLFNSRTEWDVISWNALMSGYVQWGK 208

Query: 171 TISVFKLFSRMQ-REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLS 229
                +LF RM  R+   +++  + Y       A    ++    L          A  + 
Sbjct: 209 MSEARELFDRMPGRDVVSWNIMVSGY-------ARRGDMVEARRLFD--------AAPVR 253

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSG 286
           D++  +A+VSG+A+ G    AR++F+ M ++N VS N ++     RR   E         
Sbjct: 254 DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEA------KE 307

Query: 287 LFDM-----VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           LF+M     VA  N ++  YA+ G ++++++VF  M  KD+VSW  M++   Q GC EE 
Sbjct: 308 LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +  F  M R G   +  +    LS+CA +  +  G Q+HG  ++ G      V NALL++
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y   G +      F  M E D VSWN++I  +A       EA++ +  MR     P+ +T
Sbjct: 428 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYA-RHGFGKEALEIFDMMRTTSTKPDDIT 486

Query: 462 FINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
            + +LAA S   + + G    ++    + V  +      ++   G+ G + +   +   M
Sbjct: 487 LVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDM 546

Query: 521 SERRDEVSWNSMI 533
               D   W +++
Sbjct: 547 PFEPDSTMWGALL 559



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 148/310 (47%), Gaps = 23/310 (7%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           NT++  Y + G L  A  +FD MP +++VSWA +++ Y+  G S E  ++F EM R G  
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 380

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           +NR A   VL  C +   +  + GMQ+H  ++++       V N L+AMY  C    D A
Sbjct: 381 VNRSAFACVLSTCADI--AALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMED-A 437

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF-GSLIT 202
           R  FEE+E RD++SWN++I+ Y++ G      ++F  M+      S KP++ T  G L  
Sbjct: 438 RNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTT----STKPDDITLVGVLAA 493

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
            ++S ++     +    +M    G+ +     + ++    R G    A  + + M  +  
Sbjct: 494 CSHSGLVEKG--ISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPD 551

Query: 263 VSMNGLMEGRRKGKEVH-----GYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSV 313
            +M G + G      +H     G      +F++     G    L N+YA  G   D+R +
Sbjct: 552 STMWGALLG---ASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKM 608

Query: 314 FRFMIGKDSV 323
            R M+ +  V
Sbjct: 609 -RVMMEERGV 617



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 147/348 (42%), Gaps = 82/348 (23%)

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
           E    N  ++ + + G + D E++FA M  RR   ++N+M++GY  N  LP A +L    
Sbjct: 37  EVIRSNKAITAHMRAGRVADAERLFAAMP-RRSTSTYNAMLAGYSANGRLPLAASL---- 91

Query: 553 MQRGQRLDHFTFATVLSACASVATL--ERGMEVHACGVRACLEFDVVIGS---------- 600
            +   R D++++ T+L A A  ++L   RG+      VR  + ++V+I S          
Sbjct: 92  FRAIPRPDNYSYNTLLHALAVSSSLADARGL-FDEMPVRDSVTYNVMISSHANHGLVSLA 150

Query: 601 ----------------ALVDMYSKCGRID------------------------------- 613
                            ++  Y + GR++                               
Sbjct: 151 RHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMS 210

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
            A   FD MP R+V SWN M+SGYAR G   +A  LF       P+ D  T+  V+S  +
Sbjct: 211 EARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDA----APVRDVFTWTAVVSGYA 266

Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
             G+++E  + F +M +   +      ++ MV    +   +D+ +E  N MP   N   W
Sbjct: 267 QNGMLEEARRVFDAMPERNAV-----SWNAMVAAYIQRRMMDEAKELFNMMPCR-NVASW 320

Query: 734 RTVLGACCRANCRKTELGRKAANMLFEMEPQ-NAVNYVLLANMYASGG 780
            T+L    +A   +       A  +F+  PQ +AV++  +   Y+ GG
Sbjct: 321 NTMLTGYAQAGMLEE------AKAVFDTMPQKDAVSWAAMLAAYSQGG 362



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 143/306 (46%), Gaps = 53/306 (17%)

Query: 18  YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM 77
           +DV   N L++ YV+ G ++ A +LFD MP R+ VSW  +VSGY  +G   EA ++F   
Sbjct: 191 WDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD-- 248

Query: 78  VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS------NVLIA 131
             A  + + +   +V+    + G            ++ ++ + FD +        N ++A
Sbjct: 249 --AAPVRDVFTWTAVVSGYAQNG------------MLEEARRVFDAMPERNAVSWNAMVA 294

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-QREGFRYSL 190
            Y       D A+ +F  +  R++ SWN++++ Y+Q G       +F  M Q++   ++ 
Sbjct: 295 AYIQ-RRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAA 353

Query: 191 KPNEYTFGS------------------LITAAYSSVLSGSYLL------QQILAMVKKAG 226
               Y+ G                   +  +A++ VLS    +       Q+   + +AG
Sbjct: 354 MLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAG 413

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS- 285
                +VG+AL++ + + GN   AR  FE+M +++VVS N ++ G  +    HG+   + 
Sbjct: 414 YGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYAR----HGFGKEAL 469

Query: 286 GLFDMV 291
            +FDM+
Sbjct: 470 EIFDMM 475



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 48/94 (51%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H ++++ G+    F+ N L+ +Y + G++  A   F+EM +R+ VSW  +++GY   G 
Sbjct: 405 LHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGF 464

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
             EA ++F  M       +   L  VL AC   G
Sbjct: 465 GKEALEIFDMMRTTSTKPDDITLVGVLAACSHSG 498



 Score = 47.4 bits (111), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
           LE +V+  +  +  + + GR+  A R F  MP R+  ++N+M++GY+ +G    A +LF 
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93

Query: 652 QMKLDGPLPDHVTFVGVLSACS 673
            +    P PD+ ++  +L A +
Sbjct: 94  AI----PRPDNYSYNTLLHALA 111


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 292/797 (36%), Positives = 429/797 (53%), Gaps = 103/797 (12%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A R+F  +  R   ++N++++ YS  G       LF  + R        P+ Y++ +L+ 
Sbjct: 57  AERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR--------PDNYSYNTLLH 108

Query: 203 A-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
           A A SS L+ +  L   +        + D    + ++S  A  G    AR  F+   +K+
Sbjct: 109 ALAVSSSLADARGLFDEMP-------VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKD 161

Query: 262 VVSMNGLMEGR-RKGK--EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
            VS NG++    R G+  E  G       +D ++  N L++ Y + G + ++R +F  M 
Sbjct: 162 AVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAIS-WNALMSGYVQWGKMSEARELFDRMP 220

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
           G+D VSWN M+SG  + G   EA       RR             L   A +        
Sbjct: 221 GRDVVSWNIMVSGYARRGDMVEA-------RR-------------LFDAAPV-------- 252

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
                       DV    A++S YA  G L    +VF  MPE + VSWN+++ A+     
Sbjct: 253 -----------RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRR- 300

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
           ++ EA + +                N++                      NVA+     N
Sbjct: 301 MMDEAKELF----------------NMMPC-------------------RNVASW----N 321

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
            +L+ Y + G +++ + +F  M ++ D VSW +M++ Y       + + L   M + G+ 
Sbjct: 322 TMLTGYAQAGMLEEAKAVFDTMPQK-DAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 380

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
           ++   FA VLS CA +A LE GM++H   +RA       +G+AL+ MY KCG ++ A   
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 440

Query: 619 FDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLV 678
           F+ M  R+V SWN+MI+GYARHG G +AL +F  M+     PD +T VGVL+ACSH+GLV
Sbjct: 441 FEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 500

Query: 679 DEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
           ++G  +F SM   +G+  + E ++CM+DLLGRAG L +  + +  MP  P+S +W  +LG
Sbjct: 501 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLG 560

Query: 739 ACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVK 798
           A  R + R  ELGR AA  +FE+EP+NA  YVLL+N+YAS GKW D  K R  M+E  VK
Sbjct: 561 A-SRIH-RNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVK 618

Query: 799 KEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPE 858
           K  G SW+ +++ VH F AGD  HPEK+ IY  L++L+ +M+ AGYV  T   L D+E E
Sbjct: 619 KVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEE 678

Query: 859 SKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDS 917
            KE ++ YHSEK+AVA+ +L      PIR++KNLRVCGDCH+AFK+IS I GR I+LRDS
Sbjct: 679 EKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDS 738

Query: 918 NRFHHFNDGKCSCGDYW 934
           NRFHHF  G CSCGDYW
Sbjct: 739 NRFHHFRGGSCSCGDYW 755



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 134/553 (24%), Positives = 247/553 (44%), Gaps = 68/553 (12%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +V   N  I  ++R G +A A +LF  MP R++ ++  +++GY+  G    A  +F+ + 
Sbjct: 37  EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN-----------QTFDGLVSN 127
           R                     P  + +   +H L + S+              D +  N
Sbjct: 97  R---------------------PDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYN 135

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF-SRMQREGF 186
           V+I+ + +       AR  F+    +D +SWN +++ Y + G       LF SR + +  
Sbjct: 136 VMISSHANH-GLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAI 194

Query: 187 RYSLKPNEYT-FGSLITA-------------AYSSVLSGSYLLQQILAMVKK---AGLLS 229
            ++   + Y  +G +  A             +++ ++SG Y  +  +   ++   A  + 
Sbjct: 195 SWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSG-YARRGDMVEARRLFDAAPVR 253

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSG 286
           D++  +A+VSG+A+ G    AR++F+ M ++N VS N ++     RR   E         
Sbjct: 254 DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEA------KE 307

Query: 287 LFDM-----VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           LF+M     VA  N ++  YA+ G ++++++VF  M  KD+VSW  M++   Q GC EE 
Sbjct: 308 LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +  F  M R G   +  +    LS+CA +  +  G Q+HG  ++ G      V NALL++
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y   G +      F  M E D VSWN++I  +A       EA++ +  MR     P+ +T
Sbjct: 428 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYA-RHGFGKEALEIFDMMRTTSTKPDDIT 486

Query: 462 FINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
            + +LAA S   + + G    ++    + V  +      ++   G+ G + +   +   M
Sbjct: 487 LVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDM 546

Query: 521 SERRDEVSWNSMI 533
               D   W +++
Sbjct: 547 PFEPDSTMWGALL 559



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 148/310 (47%), Gaps = 23/310 (7%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           NT++  Y + G L  A  +FD MP +++VSWA +++ Y+  G S E  ++F EM R G  
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 380

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           +NR A   VL  C +   +  + GMQ+H  ++++       V N L+AMY  C    D A
Sbjct: 381 VNRSAFACVLSTCADI--AALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMED-A 437

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF-GSLIT 202
           R  FEE+E RD++SWN++I+ Y++ G      ++F  M+      S KP++ T  G L  
Sbjct: 438 RNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTT----STKPDDITLVGVLAA 493

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
            ++S ++     +    +M    G+ +     + ++    R G    A  + + M  +  
Sbjct: 494 CSHSGLVEKG--ISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPD 551

Query: 263 VSMNGLMEGRRKGKEVH-----GYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSV 313
            +M G + G      +H     G      +F++     G    L N+YA  G   D+R +
Sbjct: 552 STMWGALLG---ASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKM 608

Query: 314 FRFMIGKDSV 323
            R M+ +  V
Sbjct: 609 -RVMMEERGV 617



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 147/348 (42%), Gaps = 82/348 (23%)

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
           E    N  ++ + + G + D E++FA M  RR   ++N+M++GY  N  LP A +L    
Sbjct: 37  EVIRSNKAITAHMRAGRVADAERLFAAMP-RRSTSTYNAMLAGYSANGRLPLAASL---- 91

Query: 553 MQRGQRLDHFTFATVLSACASVATL--ERGMEVHACGVRACLEFDVVIGS---------- 600
            +   R D++++ T+L A A  ++L   RG+      VR  + ++V+I S          
Sbjct: 92  FRAIPRPDNYSYNTLLHALAVSSSLADARGL-FDEMPVRDSVTYNVMISSHANHGLVSLA 150

Query: 601 ----------------ALVDMYSKCGRID------------------------------- 613
                            ++  Y + GR++                               
Sbjct: 151 RHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMS 210

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
            A   FD MP R+V SWN M+SGYAR G   +A  LF       P+ D  T+  V+S  +
Sbjct: 211 EARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDA----APVRDVFTWTAVVSGYA 266

Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
             G+++E  + F +M +   +      ++ MV    +   +D+ +E  N MP   N   W
Sbjct: 267 QNGMLEEARRVFDAMPERNAV-----SWNAMVAAYIQRRMMDEAKELFNMMPCR-NVASW 320

Query: 734 RTVLGACCRANCRKTELGRKAANMLFEMEPQ-NAVNYVLLANMYASGG 780
            T+L    +A   +       A  +F+  PQ +AV++  +   Y+ GG
Sbjct: 321 NTMLTGYAQAGMLEE------AKAVFDTMPQKDAVSWAAMLAAYSQGG 362



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 142/306 (46%), Gaps = 53/306 (17%)

Query: 18  YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM 77
           +D    N L++ YV+ G ++ A +LFD MP R+ VSW  +VSGY  +G   EA ++F   
Sbjct: 191 WDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD-- 248

Query: 78  VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS------NVLIA 131
             A  + + +   +V+    + G            ++ ++ + FD +        N ++A
Sbjct: 249 --AAPVRDVFTWTAVVSGYAQNG------------MLEEARRVFDAMPERNAVSWNAMVA 294

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-QREGFRYSL 190
            Y       D A+ +F  +  R++ SWN++++ Y+Q G       +F  M Q++   ++ 
Sbjct: 295 AYIQ-RRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAA 353

Query: 191 KPNEYTFGS------------------LITAAYSSVLSGSYLL------QQILAMVKKAG 226
               Y+ G                   +  +A++ VLS    +       Q+   + +AG
Sbjct: 354 MLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAG 413

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS- 285
                +VG+AL++ + + GN   AR  FE+M +++VVS N ++ G  +    HG+   + 
Sbjct: 414 YGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYAR----HGFGKEAL 469

Query: 286 GLFDMV 291
            +FDM+
Sbjct: 470 EIFDMM 475



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 48/94 (51%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H ++++ G+    F+ N L+ +Y + G++  A   F+EM +R+ VSW  +++GY   G 
Sbjct: 405 LHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGF 464

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
             EA ++F  M       +   L  VL AC   G
Sbjct: 465 GKEALEIFDMMRTTSTKPDDITLVGVLAACSHSG 498



 Score = 47.8 bits (112), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 86/191 (45%), Gaps = 17/191 (8%)

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
           LE +V+  +  +  + + GR+  A R F  MP R+  ++N+M++GY+ +G    A +LF 
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRA 711
            +    P PD+ ++  +L A + +  + +    F  M      +     ++ M+      
Sbjct: 94  AI----PRPDNYSYNTLLHALAVSSSLADARGLFDEMP-----VRDSVTYNVMISSHANH 144

Query: 712 GELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ-NAVNYV 770
           G +     + +  P   +++ W  +L A  R N R  E     A  LF    + +A+++ 
Sbjct: 145 GLVSLARHYFDLAP-EKDAVSWNGMLAAYVR-NGRVEE-----ARGLFNSRTEWDAISWN 197

Query: 771 LLANMYASGGK 781
            L + Y   GK
Sbjct: 198 ALMSGYVQWGK 208


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/709 (36%), Positives = 401/709 (56%), Gaps = 15/709 (2%)

Query: 237 LVSGFARLGNFYYARKIFEQMIQ----------KNVVSMNGLMEGRRKGKEVHGYLIRSG 286
           +V GFA++G++      F ++I+            V+     ++  + G+ +H  + + G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
           L     V   LV+MY KC  I+D+R +F  M  +D V+W  MI G  + G   E+++ F 
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
            MR +G++    ++++ + +CA LG +   + I     +     DV +  A++ +YA  G
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
            +    ++F  M E + +SW+++I A+        +A+  +  M  +G  P+ +T  ++L
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYG-YHGQGRKALDLFRMMLSSGMLPDKITLASLL 239

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
            A S     ++G  +H  V K+ +  +  +  AL+  YGKC E++D   +F +M ER D 
Sbjct: 240 YACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPER-DL 298

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           V+W  MI GY       +++ L   M + G   D     TV+ ACA +  + +   +   
Sbjct: 299 VTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDY 358

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
             R   + DV++G+A++DM++KCG ++ A   FD M  +NV SW++MI+ Y  HG G KA
Sbjct: 359 IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 418

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           L LF  M   G LP+ +T V +L ACSHAGLV+EG + F  M + Y +   ++ ++C+VD
Sbjct: 419 LDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVD 478

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           LLGRAG LD+  + I  M +  +  +W   LGA CR + +   L  KAA  L E++PQN 
Sbjct: 479 LLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA-CRTH-KDVVLAEKAATSLLELQPQNP 536

Query: 767 VNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKD 826
            +Y+LL+N+YA+ G+WEDVAK R  M +  +KK  G +W+ + +  H F  GD +HP   
Sbjct: 537 GHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSK 596

Query: 827 LIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPI 885
            IYE LK L  K+   GYVP T F L D++ E K  ++  HSEK+A+AF ++      PI
Sbjct: 597 EIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPI 656

Query: 886 RIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           RI+KNLRVCGDCH+  K +S I GR I++RD+NRFHHF +G CSCGDYW
Sbjct: 657 RIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/522 (24%), Positives = 248/522 (47%), Gaps = 54/522 (10%)

Query: 57  IVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLK 116
           +V G+   G        F+E++R G   + Y L  V+RAC++      + G  +H +V K
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDL--KNLQMGRLIHHIVYK 58

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
                D  V   L+ MY  C E  D AR +F++++ RDL++W  +I  Y++ G       
Sbjct: 59  FGLDLDHFVCAALVDMYVKCREIED-ARFLFDKMQERDLVTWTVMIGGYAECGKANESLV 117

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQIL-AMVKKAGLLSDLYVGS 235
           LF +M+ EG    + P++    +++T  ++    G+    +I+   +++     D+ +G+
Sbjct: 118 LFEKMREEG----VVPDKV---AMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGT 170

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM-------EGRRK-------------- 274
           A++  +A+ G    AR+IF++M +KNV+S + ++       +GR+               
Sbjct: 171 AMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLP 230

Query: 275 --------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                               G+ +H  + + GL     V   LV+MY KC  I+D+R +F
Sbjct: 231 DKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLF 290

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             M  +D V+W  MI G  + G   E+++ F  MR +G++    ++++ + +CA LG + 
Sbjct: 291 DKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMH 350

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
             + I     +     DV +  A++ ++A  G +    ++F  M E + +SW+++I A+ 
Sbjct: 351 KARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYG 410

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANE 493
                  +A+  +  M R+G  PN +T +++L A S   + + G +  + + + Y+V  +
Sbjct: 411 -YHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRAD 469

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
                 ++   G+ G +D+  K+   M+  +DE  W + +  
Sbjct: 470 VKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 511



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 220/479 (45%), Gaps = 66/479 (13%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +L H  + K G   D F+C  L+++YV+  ++  A  LFD+M +R+ V+W  ++ GY  
Sbjct: 49  GRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAE 108

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G +NE+  +F++M   G + ++ A+ +V+ AC + G         +   + +     D 
Sbjct: 109 CGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLG--AMHKARIIDDYIQRKKFQLDV 166

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           ++   +I MY  C    + AR IF+ +E +++ISW+++I+ Y   G       LF  M  
Sbjct: 167 ILGTAMIDMYAKC-GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLS 225

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G    + P++ T  SL+ A   S L    + + I  +V K GL  D +V +ALV  + +
Sbjct: 226 SG----MLPDKITLASLLYAC--SDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGK 279

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG-------------------------------- 271
                 AR +F++M ++++V+   ++ G                                
Sbjct: 280 CREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTV 339

Query: 272 ---------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                      K + +  Y+ R      V +G  +++M+AKCG ++ +R +F  M  K+ 
Sbjct: 340 VFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNV 399

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           +SW+ MI+    +G   +A+  F  M R G++ +  +L+S L +C+  G +        E
Sbjct: 400 ISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLV-------EE 452

Query: 383 GLKL--------GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           GL+          + +DV     ++ L   AG L   LK+   M  E D+  W + +GA
Sbjct: 453 GLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 511


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/665 (38%), Positives = 388/665 (58%), Gaps = 7/665 (1%)

Query: 273 RKGKEVHGYLIR-SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
           ++G+++H ++I  S L +   +   L   YA CG +  +  +F  ++ K+S  WN MI G
Sbjct: 76  KQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRG 135

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
              NG   ++++ +  M   G  + NF+    L +C  L  + +G+++H E +  GL+SD
Sbjct: 136 YASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESD 195

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           + V N+LL++YA  G +     VF  M E D  SWN++I  +A + A    A   +  M 
Sbjct: 196 IYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKN-ADSGTAFLVFDLMG 254

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI-ENALLSCYGKCGEM 510
           +AG   +  T + +L+A +     K G  +H   ++ ++ N      N+L+  Y  C  M
Sbjct: 255 KAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCM 314

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
            D  ++F R+   +D VSWNSMI GY  N    +++ L   M   G   D  TF  VL A
Sbjct: 315 VDARRLFERV-RWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGA 373

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
           C  +A L  GM +H+  V+   + + ++G+ALVDMYSKCG +  + R FD MP +++ SW
Sbjct: 374 CDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSW 433

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           ++M++GY  HG G +A+++   MK +  +PD+  F  +LSACSHAGLV EG + F  M +
Sbjct: 434 SAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEK 493

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
            Y + P L  +SCMVDLLGRAG LD+    I  M I P S IW  +L A  R + +  +L
Sbjct: 494 EYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTA-SRLH-KNIKL 551

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
              +A  +F+M P+   +Y+ L+N+YA+  +W+DV + R  ++   +KK  GCS++ + +
Sbjct: 552 AEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDN 611

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
            VH F+ GD+SH + + IY KL EL Q++++AGY P T    +D+E E KE ++  HSE+
Sbjct: 612 MVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSER 671

Query: 871 IAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +A+AF L        IRI KNLRVCGDCH+  K IS++ GREI++RD +RFHHF  G CS
Sbjct: 672 LAIAFALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRDIHRFHHFIKGFCS 731

Query: 930 CGDYW 934
           CGDYW
Sbjct: 732 CGDYW 736



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 125/511 (24%), Positives = 226/511 (44%), Gaps = 79/511 (15%)

Query: 84  LNRYALGSVLRACQECGP--------SGFKFGMQVHCLVLK----SNQTFDGLVSNVLIA 131
           L +Y L S+     +CG           FK G Q+H  ++      N T+   ++  L A
Sbjct: 52  LQQYPLTSL-----QCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTY---LNTKLAA 103

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
            Y  C   +  A  IF+ I  ++   WN +I  Y+  G  +    L+    RE   +  +
Sbjct: 104 FYAGCGLMSQ-AEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLY----REMLCFGQR 158

Query: 192 PNEYTFGSLITAAYSSVLSGSYLL----QQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
            + +T+  ++ A       G  LL    +++ + V   GL SD+YVG++L++ +A+ G+ 
Sbjct: 159 ADNFTYPFVLKAC------GDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDM 212

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------------- 274
             AR +F++M ++++ S N ++ G  K                                 
Sbjct: 213 GTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSAC 272

Query: 275 --------GKEVHGYLIRSGLFDMVA-VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                   GK +HGY +R+ + +      N L+ MY  C  + D+R +F  +  KD+VSW
Sbjct: 273 ADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSW 332

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N+MI G  +NG   E++  F  M  DG      + I+ L +C  +  +  G  IH   +K
Sbjct: 333 NSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVK 392

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G D++  V  AL+ +Y+  G L+   +VF  MP+   VSW++++  +        EA+ 
Sbjct: 393 KGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYG-LHGRGREAIS 451

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCY 504
               M+     P+   F +IL+A S   +   G ++  ++ K YNV    +  + ++   
Sbjct: 452 ILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLL 511

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           G+ G +D+   I   M  +     W ++++ 
Sbjct: 512 GRAGHLDEAYVIIRTMEIKPTSDIWAALLTA 542



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 188/411 (45%), Gaps = 44/411 (10%)

Query: 10  QILKHGFAYDVFLCNTLINV-----YVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           Q+  H  ++ +   NT +N      Y   G ++ A  +FD +  +NS  W  ++ GY   
Sbjct: 80  QLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASN 139

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G+  ++  +++EM+  G   + +    VL+AC +      + G +VH  V+      D  
Sbjct: 140 GLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLL--VEIGRRVHSEVVVCGLESDIY 197

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V N L+AMY         AR +F+ +  RDL SWN++IS Y++  D+ + F +F  M + 
Sbjct: 198 VGNSLLAMYAK-FGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKA 256

Query: 185 GF----------------RYSLKPNEYTFGSLITAA---YSSVLSGSYLLQ--QILAMVK 223
           G                   ++K  +   G  +  +   Y+   + S +        MV 
Sbjct: 257 GLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVD 316

Query: 224 KAGLLS-----DLYVGSALVSGFARLGNFYYARKIFEQMI-------QKNVVSMNGL--- 268
              L       D    ++++ G+AR G+ + + ++F +M        Q   +++ G    
Sbjct: 317 ARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQ 376

Query: 269 MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
           +   R G  +H YL++ G      VG  LV+MY+KCG++  SR VF  M  K  VSW+ M
Sbjct: 377 IAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAM 436

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           ++G   +G   EAI     M+ + ++  N    S LS+C+  G ++ G++I
Sbjct: 437 VAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEI 487



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 145/265 (54%), Gaps = 10/265 (3%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H +++  G   D+++ N+L+ +Y + GD+ +A  +FD M +R+  SW  ++SGY     S
Sbjct: 184 HSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADS 243

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN-QTFDGLVS 126
             A  +F  M +AG   +   L  +L AC +      K G  +H   ++++   ++   +
Sbjct: 244 GTAFLVFDLMGKAGLFADCTTLLGLLSACADL--KAVKEGKVIHGYAVRNSIGNYNKFFT 301

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI MY +C    D ARR+FE +  +D +SWNS+I  Y++ GD     +LF RM  +G 
Sbjct: 302 NSLIEMYCNCNCMVD-ARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGS 360

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
                P++ TF +++ A    + +  Y +     +VKK G  ++  VG+ALV  +++ G+
Sbjct: 361 ----GPDQVTFIAVLGAC-DQIAALRYGMSIHSYLVKK-GFDANTIVGTALVDMYSKCGS 414

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG 271
              +R++F++M  K++VS + ++ G
Sbjct: 415 LACSRRVFDEMPDKSLVSWSAMVAG 439



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 50/94 (53%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  ++K GF  +  +   L+++Y + G LA + ++FDEMPD++ VSW+ +V+GY   G 
Sbjct: 386 IHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGR 445

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
             EA  +   M     + +     S+L AC   G
Sbjct: 446 GREAISILDGMKANSVIPDNGVFTSILSACSHAG 479


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 269/728 (36%), Positives = 413/728 (56%), Gaps = 30/728 (4%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNV----------VSMNGLMEGRRKGKEVH 279
           +LY  + LV+ FA  G      +  E+M Q  V          +   G  E  R G  +H
Sbjct: 22  NLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIH 81

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM-IGKDSVSWNTMISGLDQNGCY 338
             ++ S L     V N L+NMY KCG++  ++ VF  M   ++ +SW+ M      +G  
Sbjct: 82  QMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNV 141

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
            EA+ +F  M   G+ ++  ++++ LS+C+S   +  G+ IH      G +S++ V+NA+
Sbjct: 142 WEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVANAV 201

Query: 399 LSLYADAGYLSRCLKVFFLMPE--HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           +++Y   G +    KVF  M E   D VSWN ++  +  ++    +A++ Y   +R    
Sbjct: 202 MTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDR-GKDAIQLY---QRMQLR 257

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P+ VT++++L+A SS     LG  +H Q++   +     + NAL+S Y KCG   +   +
Sbjct: 258 PDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAV 317

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ-----RGQRL--DHFTFATVLS 569
           F +M E+R  +SW ++IS Y+   L+ +A +L   M++       QR+  D   F T+L+
Sbjct: 318 FDKM-EQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILN 376

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVY 628
           ACA V+ LE+G  V        L  D  +G+A+V++Y KCG I+ A R FD +  R +V 
Sbjct: 377 ACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQ 436

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
            WN+MI+ YA+ G   +AL LF +M+++G  PD  +FV +L ACSH GL D+G  +F SM
Sbjct: 437 LWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSM 496

Query: 689 SQVY-GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           +  Y  +   ++ F C+ DLLGR G L + EEF+ K+P+ P+++ W ++L AC   N R 
Sbjct: 497 TTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAAC--RNHRD 554

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
            +  ++ AN L  +EP+ A  YV L+N+YA   KW  VAK RK M E  VKKE G S + 
Sbjct: 555 LKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIE 614

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
           +   +H F  GD++HP    I E+L +L+ +M++ GYVP TK  L  ++ + KE L+  H
Sbjct: 615 IGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSH 674

Query: 868 SEKIAVAFVLTRNS-KLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SE++A+A  L       P+R+ KNLRVC DCH+A K ISKI GR+IV+RD  RFH F DG
Sbjct: 675 SERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDG 734

Query: 927 KCSCGDYW 934
           KCSC DYW
Sbjct: 735 KCSCQDYW 742



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/449 (30%), Positives = 231/449 (51%), Gaps = 16/449 (3%)

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
           MYA C +  D+++ F  +  ++  SW  +++    +G  +E +     MR+DG+     +
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
            I+ L SC     +  G +IH   +   L+ D  VSNALL++Y   G LS   +VF  M 
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120

Query: 420 E-HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
              + +SW+ + GA A     V EA++++  M   G        + IL+A SS ++ + G
Sbjct: 121 RTRNVISWSIMAGAHA-LHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG 179

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER-RDEVSWNSMISGYI 537
             +H+ +      +E  + NA+++ YG+CG +++  K+F  M E  RD VSWN M+S Y+
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239

Query: 538 HNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
           HN+    A+ L     QR Q R D  T+ ++LSAC+S   +  G  +H   V   LE +V
Sbjct: 240 HNDRGKDAIQL----YQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNV 295

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM--- 653
           ++G+ALV MY+KCG    A   FD M  R++ SW ++IS Y R     +A  LF QM   
Sbjct: 296 IVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLEL 355

Query: 654 KLDGP----LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           + +G      PD + FV +L+AC+    +++G K     +   GL       + +V+L G
Sbjct: 356 EKNGSSQRVKPDALAFVTILNACADVSALEQG-KMVSEQAASCGLSSDKAVGTAVVNLYG 414

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLG 738
           + GE+++     + +   P+  +W  ++ 
Sbjct: 415 KCGEIEEARRIFDAVCSRPDVQLWNAMIA 443



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 136/569 (23%), Positives = 253/569 (44%), Gaps = 63/569 (11%)

Query: 29  VYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYA 88
           +Y        A   FD +  RN  SW  +V+ +   G S E  +  + M + G   +   
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE 148
             + L +C +  P   + G+++H +V+ S    D  VSN L+ MY  C  S   A+R+F 
Sbjct: 61  FITALGSCGD--PESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKC-GSLSHAKRVFA 117

Query: 149 EIE-TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS 207
           ++E TR++ISW+ +   ++  G+     + F  M   G    +K  +    ++++A  S 
Sbjct: 118 KMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLG----IKATKSAMVTILSACSSP 173

Query: 208 VL-SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ--KNVVS 264
            L     ++   +A+   +G  S+L V +A+++ + R G    ARK+F+ M +  ++VVS
Sbjct: 174 ALVQDGRMIHSCIAL---SGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVS 230

Query: 265 MNGLM--------------------------------------EGRRKGKEVHGYLIRSG 286
            N ++                                      E    G+ +H  ++   
Sbjct: 231 WNIMLSTYVHNDRGKDAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDE 290

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
           L   V VGN LV+MYAKCG+  ++R+VF  M  +  +SW T+IS   +     EA   F 
Sbjct: 291 LEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQ 350

Query: 347 AM---RRDG----LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
            M    ++G    +     + ++ L++CA +  +  G+ +  +    GL SD +V  A++
Sbjct: 351 QMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVV 410

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           +LY   G +    ++F  +     V  WN++I  +A       EA+K +  M   G  P+
Sbjct: 411 NLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQF-GQSHEALKLFWRMEMEGVRPD 469

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKI 516
             +F++IL A S   +   G      +         TI++   +    G+ G + + E+ 
Sbjct: 470 SFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEF 529

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKA 545
             ++  + D V+W S+++   ++  L +A
Sbjct: 530 LEKLPVKPDAVAWTSLLAACRNHRDLKRA 558



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 135/271 (49%), Gaps = 17/271 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVS 59
           +D ++ H  I   GF  ++ + N ++ +Y R G +  A K+FD M +  R+ VSW  ++S
Sbjct: 177 QDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLS 236

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
            Y H     +A ++++ M       ++    S+L AC      G   G  +H  ++    
Sbjct: 237 TYVHNDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVG--LGRVLHKQIVNDEL 291

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             + +V N L++MY  C   T+ AR +F+++E R +ISW +IIS Y +R        LF 
Sbjct: 292 EKNVIVGNALVSMYAKCGSHTE-ARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQ 350

Query: 180 RM---QREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVG 234
           +M   ++ G    +KP+   F +++ A    S++  G  + +Q        GL SD  VG
Sbjct: 351 QMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQ----AASCGLSSDKAVG 406

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
           +A+V+ + + G    AR+IF+ +  +  V +
Sbjct: 407 TAVVNLYGKCGEIEEARRIFDAVCSRPDVQL 437



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 157/340 (46%), Gaps = 47/340 (13%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           ++ H QI+      +V + N L+++Y + G    A  +FD+M  R+ +SW  I+S Y  +
Sbjct: 280 RVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRR 339

Query: 65  GMSNEACKMFKEMVR-------AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
            +  EAC +F++M+             +  A  ++L AC +   S  + G  V       
Sbjct: 340 RLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADV--SALEQGKMVSEQAASC 397

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR-DLISWNSIISVYSQRGDTISVFK 176
             + D  V   ++ +YG C E  + ARRIF+ + +R D+  WN++I+VY+Q G +    K
Sbjct: 398 GLSSDKAVGTAVVNLYGKCGEIEE-ARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALK 456

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITA-----------AYSSVLSGSYLLQQILAMVKKA 225
           LF RM+ EG R    P+ ++F S++ A           +Y + ++  Y  + +   ++  
Sbjct: 457 LFWRMEMEGVR----PDSFSFVSILLACSHTGLEDQGKSYFTSMTTEY--RNVTRTIQHF 510

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRR------KGKEV 278
           G ++DL           R G    A +  E++ ++ + V+   L+   R      + KEV
Sbjct: 511 GCVADL---------LGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEV 561

Query: 279 HGYLIRSGLFDMVAVGN-GLVNMYAKCGTIDDSRSVFRFM 317
              L+R  L    A G   L N+YA+         V +FM
Sbjct: 562 ANKLLR--LEPRCATGYVALSNIYAELQKWHAVAKVRKFM 599


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 249/679 (36%), Positives = 403/679 (59%), Gaps = 16/679 (2%)

Query: 264 SMNGLMEGRRKGKEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
           S NGL +   +G +VH   +  G  FD++ + N L++MY KC  +D + SVF  M+ ++ 
Sbjct: 15  SKNGLFD---QGLQVHAAAVNMGFGFDLI-MNNDLIDMYGKCSRVDLACSVFDRMLERNV 70

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           VSW  ++ G  Q G  + ++   C M   G+  + F+  ++L +C +LG +  G QIHG 
Sbjct: 71  VSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGM 130

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            +K G +    V NA + +Y+  G +    +VF  MP  + VSWN++I      E    +
Sbjct: 131 CVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHT-HEGNGRK 189

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTIENAL 500
           ++  +  M+  G  P+  TF + L A  +    + G Q+HA +I   + ++    I +A+
Sbjct: 190 SLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAI 249

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD 560
           +  Y KCG + + +K+F R+ E+++ +SW+++I G+     L +AM+L   + +    +D
Sbjct: 250 VDLYAKCGYLFEAQKVFDRI-EQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVD 308

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
            F  + ++   A +A +E+G ++H   ++     D+ + ++++DMY KCG  + A R F 
Sbjct: 309 GFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFS 368

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
            M VRNV SW  MI+GY +HG G+KA+ LF++M+LDG   D V ++ +LSACSH+GL+ E
Sbjct: 369 EMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRE 428

Query: 681 GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC 740
             ++F  +   + + P +E ++CMVD+LGRAG+L + +  I  M + PN  IW+T+L A 
Sbjct: 429 SQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSA- 487

Query: 741 CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKE 800
           CR +    E+GR+   +LF M+  N VNYV+++N+YA  G W++  + RK +K   +KKE
Sbjct: 488 CRVH-GNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKE 546

Query: 801 AGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR-DAGYVPQTKFALFDLEPES 859
           AG SWV +   +H F  GD++HP  + I+E LKE+ ++++ + GY    +FAL D+E ES
Sbjct: 547 AGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALHDVEEES 606

Query: 860 KEDLVSYHSEKIAVAFVLT----RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLR 915
           KE+ +  HSEK+A+   L           IR+ KNLRVCGDCH   K +SKI+ +  V+R
Sbjct: 607 KEENLRVHSEKLAIGLALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKILKKVFVVR 666

Query: 916 DSNRFHHFNDGKCSCGDYW 934
           D+NRFH F DG CSCGDYW
Sbjct: 667 DANRFHRFEDGLCSCGDYW 685



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 208/418 (49%), Gaps = 60/418 (14%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   +  GF +D+ + N LI++Y +   +  A  +FD M +RN VSW  ++ GY  +G +
Sbjct: 27  HAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNA 86

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
             +  +  EM  +G   N +   + L+AC   G    + GMQ+H + +KS   +  +V N
Sbjct: 87  KGSLALLCEMGYSGVKPNEFTFSTSLKACGALGV--VENGMQIHGMCVKSGFEWVSVVGN 144

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
             I MY  C      A ++F ++  R+L+SWN++I+ ++  G+      LF RMQ +G  
Sbjct: 145 ATIDMYSKC-GRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQG-- 201

Query: 188 YSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDL--YVGSALVSGFAR 243
               P+E+TF S + A  A  ++  G+    QI A +   G    +   + SA+V  +A+
Sbjct: 202 --EVPDEFTFTSTLKACGALGAIRGGT----QIHASLITRGFPISIRNIIASAIVDLYAK 255

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG-------------------------------- 271
            G  + A+K+F+++ QKN++S + L++G                                
Sbjct: 256 CGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIM 315

Query: 272 ---------RRKGKEVHGYLIR--SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                      +GK++H Y+++  SGL   ++V N +++MY KCG  +++  +F  M  +
Sbjct: 316 MGVFADLALVEQGKQMHCYILKVPSGL--DISVANSIIDMYLKCGLTEEAERLFSEMQVR 373

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
           + VSW  MI+G  ++G  E+AI  F  M+ DG+     + ++ LS+C+  G I   Q+
Sbjct: 374 NVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQE 431



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 198/414 (47%), Gaps = 17/414 (4%)

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
           MS    L   L +C+  G    G Q+H   + +G   D+ ++N L+ +Y     +     
Sbjct: 1   MSERQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACS 60

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           VF  M E + VSW +++  +   E     ++    +M  +G  PN  TF   L A  +  
Sbjct: 61  VFDRMLERNVVSWTALMCGYL-QEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALG 119

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           + + G Q+H   +K      + + NA +  Y KCG +   E++F +M   R+ VSWN+MI
Sbjct: 120 VVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMP-FRNLVSWNAMI 178

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
           +G+ H     K++ L   M  +G+  D FTF + L AC ++  +  G ++HA  +     
Sbjct: 179 AGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFP 238

Query: 594 FDV--VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
             +  +I SA+VD+Y+KCG +  A + FD +  +N+ SW+++I G+A+ G+  +A+ LF 
Sbjct: 239 ISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFR 298

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP---QLEQFSCMVDLL 708
           Q++      D      ++   +   LV++G    K M      +P    +   + ++D+ 
Sbjct: 299 QLRESVSNVDGFVLSIMMGVFADLALVEQG----KQMHCYILKVPSGLDISVANSIIDMY 354

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
            + G  ++ E   ++M +  N + W  ++         K  LG KA ++   M+
Sbjct: 355 LKCGLTEEAERLFSEMQVR-NVVSWTVMI-----TGYGKHGLGEKAIHLFNRMQ 402



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 128/543 (23%), Positives = 239/543 (44%), Gaps = 62/543 (11%)

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
           R  L  +LR C + G   F  G+QVH   +     FD +++N LI MYG C    D A  
Sbjct: 4   RQRLAKLLRNCSKNGL--FDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKC-SRVDLACS 60

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-- 203
           +F+ +  R+++SW +++  Y Q G+      L   M   G    +KPNE+TF + + A  
Sbjct: 61  VFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSG----VKPNEFTFSTSLKACG 116

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
           A   V +G     QI  M  K+G      VG+A +  +++ G    A ++F +M  +N+V
Sbjct: 117 ALGVVENG----MQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLV 172

Query: 264 SMNGLMEGR-----------------------------------------RKGKEVHGYL 282
           S N ++ G                                          R G ++H  L
Sbjct: 173 SWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASL 232

Query: 283 IRSGLFDMV--AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
           I  G    +   + + +V++YAKCG + +++ VF  +  K+ +SW+ +I G  Q G   E
Sbjct: 233 ITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLE 292

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A+  F  +R        F L   +   A L  +  G+Q+H   LK+    D+SV+N+++ 
Sbjct: 293 AMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIID 352

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +Y   G      ++F  M   + VSW  +I  +     L  +A+  +  M+  G   + V
Sbjct: 353 MYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYG-KHGLGEKAIHLFNRMQLDGIELDEV 411

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFA 518
            ++ +L+A S   + +   +  +++   N   +  IE+   ++   G+ G++ + + +  
Sbjct: 412 AYLALLSACSHSGLIRESQEYFSRLCN-NHQMKPNIEHYACMVDILGRAGQLKEAKNLIE 470

Query: 519 RMSERRDEVSWNSMISG-YIHNEL-LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
            M  + +E  W +++S   +H  L + + +  + F M     +++   + + +       
Sbjct: 471 NMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKE 530

Query: 577 LER 579
            ER
Sbjct: 531 CER 533



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 102/432 (23%), Positives = 206/432 (47%), Gaps = 48/432 (11%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K GF +   + N  I++Y + G +  A ++F++MP RN VSW  +++G+TH+G 
Sbjct: 127 IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGN 186

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN--QTFDGL 124
             ++  +F+ M   G + + +   S L+AC   G    + G Q+H  ++      +   +
Sbjct: 187 GRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGA--IRGGTQIHASLITRGFPISIRNI 244

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR- 183
           +++ ++ +Y  C    + A+++F+ IE ++LISW+++I  ++Q G+ +    LF +++  
Sbjct: 245 IASAIVDLYAKCGYLFE-AQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRES 303

Query: 184 ----EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
               +GF  S+    +   +L+              +Q+   + K     D+ V ++++ 
Sbjct: 304 VSNVDGFVLSIMMGVFADLALVEQG-----------KQMHCYILKVPSGLDISVANSIID 352

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG----KEVHGYLIRSGLFDMVAVGN 295
            + + G    A ++F +M  +NVVS   ++ G  K     K +H  L      D + +  
Sbjct: 353 MYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIH--LFNRMQLDGIELDE 410

Query: 296 ----GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT-----MISGLDQNGCYEEA---IM 343
                L++  +  G I +S+  F  +     +  N      M+  L + G  +EA   I 
Sbjct: 411 VAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIE 470

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LY 402
           N      +G+        + LS+C   G + +G+++ GE L   +D+D  V+  ++S +Y
Sbjct: 471 NMKLKPNEGIWQ------TLLSACRVHGNLEIGREV-GEIL-FRMDTDNPVNYVMMSNIY 522

Query: 403 ADAGYLSRCLKV 414
           A+AGY   C +V
Sbjct: 523 AEAGYWKECERV 534



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 12/126 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ILK     D+ + N++I++Y++ G    A +LF EM  RN VSW  +++GY
Sbjct: 326 EQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGY 385

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G+  +A  +F  M   G  L+  A  ++L AC   G            L+ +S + F
Sbjct: 386 GKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSG------------LIRESQEYF 433

Query: 122 DGLVSN 127
             L +N
Sbjct: 434 SRLCNN 439


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/709 (36%), Positives = 396/709 (55%), Gaps = 72/709 (10%)

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLF 288
           +D ++ + L+  +A+ G    A+ +F++M+++++ S N L+                   
Sbjct: 56  TDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSA----------------- 98

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
                       YAK G+I + ++ F  M  +DSVS+NT I+G   N C +E++  F  M
Sbjct: 99  ------------YAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRM 146

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           +R+G   + ++++S L++ A L  +  G+QIHG  +      +V + NAL  +YA  G +
Sbjct: 147 QREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEI 206

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
            +   +F  + + + VSWN +I  +A +     + +     MR +G  P+ VT   I+AA
Sbjct: 207 EQARWLFDCLTKKNLVSWNLMISGYAKN-GQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA 265

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
                                              Y +CG +D+  ++F+   E+ D V 
Sbjct: 266 -----------------------------------YCQCGRVDEARRVFSEFKEK-DIVC 289

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           W +M+ GY  N     A+ L   M+      D +T ++V+S+CA +A+L  G  VH   +
Sbjct: 290 WTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSI 349

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
            A L  ++++ SAL+DMYSKCG ID A   F+LMP RNV SWN+MI G A++GH   AL 
Sbjct: 350 LAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALE 409

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           LF  M      PD+VTF+G+LSAC H   +++G ++F S++  +G+ P L+ ++CMV+LL
Sbjct: 410 LFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLL 469

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAV 767
           GR G +++    I  M   P+ LIW T+L  C  + +    E+   AA  LFE++P  AV
Sbjct: 470 GRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEV---AARHLFELDPTIAV 526

Query: 768 NYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDL 827
            Y++L+NMYAS G+W+DVA  R  MK   VKK AG SW+ + + VH F + D +HPE + 
Sbjct: 527 PYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESED 586

Query: 828 IYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR--NSKLPI 885
           IYEKL  L  K+++ G+ P T   L D+  + K   + +HSEK+A+AF L +  N   PI
Sbjct: 587 IYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPI 646

Query: 886 RIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           RI+KN+R+C DCH   KF S+I+GR+I+LRDSNRFHHF+ GKCSC D W
Sbjct: 647 RIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 197/387 (50%), Gaps = 27/387 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +DA+    ++LK     D+F  N L++ Y + G + +    FD MP R+SVS+   ++G+
Sbjct: 75  RDAQNLFDKMLKR----DIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGF 130

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +      E+ ++FK M R GF    Y + S+L A  +   S  ++G Q+H  ++  N   
Sbjct: 131 SGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQL--SDLRYGKQIHGSIIVRNFLG 188

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  + N L  MY  C E  + AR +F+ +  ++L+SWN +IS Y++ G       L  +M
Sbjct: 189 NVFIWNALTDMYAKCGE-IEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQM 247

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           +  G      P++ T  ++I AAY          +++ +  K+     D+   +A++ G+
Sbjct: 248 RLSGHM----PDQVTMSTII-AAYCQCGRVDEA-RRVFSEFKE----KDIVCWTAMMVGY 297

Query: 242 ARLGNFYYARKIFEQMIQKN----------VVSMNGLMEGRRKGKEVHGYLIRSGLFDMV 291
           A+ G    A  +F +M+ ++          VVS    +     G+ VHG  I +GL + +
Sbjct: 298 AKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNL 357

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
            V + L++MY+KCG IDD+RSVF  M  ++ VSWN MI G  QNG  ++A+  F  M + 
Sbjct: 358 LVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQ 417

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQ 378
                N + I  LS+C    WI  GQ+
Sbjct: 418 KFKPDNVTFIGILSACLHCNWIEQGQE 444



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 137/561 (24%), Positives = 231/561 (41%), Gaps = 112/561 (19%)

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
           Q  D  + N L+ +Y    +  D A+ +F+++  RD+ SWN+++S Y++ G   ++   F
Sbjct: 54  QPTDSFLHNQLLHLYAKFGKLRD-AQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATF 112

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK---AGLLSDLYVGS 235
            RM    FR S+  N    G           SG+   Q+ L + K+    G     Y   
Sbjct: 113 DRMP---FRDSVSYNTTIAG----------FSGNSCPQESLELFKRMQREGFEPTEYTIV 159

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN 295
           ++++  A+L +  Y                         GK++HG +I       V + N
Sbjct: 160 SILNASAQLSDLRY-------------------------GKQIHGSIIVRNFLGNVFIWN 194

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMS 355
            L +MYAKCG I+ +R +F  +  K+ VSWN MISG  +NG  E+ I     MR  G M 
Sbjct: 195 ALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMP 254

Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
              ++                                   + +++ Y   G +    +VF
Sbjct: 255 DQVTM-----------------------------------STIIAAYCQCGRVDEARRVF 279

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
               E D V W +++  +A +     +A+  + +M      P+  T  +++++ +  +  
Sbjct: 280 SEFKEKDIVCWTAMMVGYAKN-GREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASL 338

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             G  VH + I   + N   + +AL+  Y KCG +DD   +F  M   R+ VSWN+MI G
Sbjct: 339 HHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPT-RNVVSWNAMIVG 397

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
              N     A+ L   M+Q+  + D+ TF  +LSAC     +E+G E           FD
Sbjct: 398 CAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEY----------FD 447

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
            +                       + P  + Y+   M++   R G  ++A+ L   M  
Sbjct: 448 SITNQ------------------HGMTPTLDHYA--CMVNLLGRTGRIEQAVALIKNMAH 487

Query: 656 DGPLPDHVTFVGVLSACSHAG 676
           D   PD + +  +LS CS  G
Sbjct: 488 D---PDFLIWSTLLSICSTKG 505



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 11/164 (6%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G   ++ + + LI++Y + G +  A  +F+ MP RN VSW  ++ G    G   +A ++F
Sbjct: 352 GLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELF 411

Query: 75  KEMVRAGFLLNRYALGSVLRACQEC-----GPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
           + M++  F  +      +L AC  C     G   F      H +      T D      +
Sbjct: 412 ENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMT----PTLDHYA--CM 465

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTIS 173
           + + G           I       D + W++++S+ S +GD ++
Sbjct: 466 VNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVN 509


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 255/706 (36%), Positives = 397/706 (56%), Gaps = 69/706 (9%)

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           N +++ +AK G +D +R VF  +   DSVSW TMI G +  G ++ A+  F  M   G+ 
Sbjct: 83  NTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGIS 142

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG-------- 406
            + F+  + L+SCA+   + +G+++H   +KLG    V V+N+LL++YA  G        
Sbjct: 143 PTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVV 202

Query: 407 ------------------YLSRC-----LKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
                             ++  C     L +F  M + D VSWNS+I  +      +   
Sbjct: 203 FDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRAL 262

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
             +   ++ +   P+  T  ++L+A ++    KLG Q+HA +++ +V     + NAL+S 
Sbjct: 263 ETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISM 322

Query: 504 YGK---------------------------------CGEMDDCEKIFARMSERRDEVSWN 530
           Y K                                  G++D    IF  + + RD V+W 
Sbjct: 323 YAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSL-KHRDVVAWT 381

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           +MI GY  N L+  A+ L   M++ G + +++T A VLS  +S+A+L+ G ++HA  +R 
Sbjct: 382 AMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRL 441

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFD-LMPVRNVYSWNSMISGYARHGHGDKALTL 649
                V +G+AL+ MYS+ G I  A + F+ +   R+  +W SMI   A+HG G++A+ L
Sbjct: 442 EEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIEL 501

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           F +M      PDH+T+VGVLSAC+H GLV++G  +F  M  V+ + P    ++CM+DLLG
Sbjct: 502 FEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLG 561

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
           RAG L++   FI  MPI P+ + W ++L +C R + +  +L + AA  L  ++P N+  Y
Sbjct: 562 RAGLLEEAYNFIRNMPIEPDVVAWGSLLSSC-RVH-KYVDLAKVAAEKLLLIDPNNSGAY 619

Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIY 829
           + LAN  ++ GKWED AK RK+MK+  VKKE G SWV +K+ VH+F   D  HP++D IY
Sbjct: 620 LALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIY 679

Query: 830 EKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIM 888
             + ++ ++++  G++P T   L DLE E KE ++ +HSEK+A+AF L    K   +RIM
Sbjct: 680 CMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIM 739

Query: 889 KNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           KNLRVC DCHSA ++IS +V REI++RD+ RFHHF DG CSC DYW
Sbjct: 740 KNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 169/636 (26%), Positives = 291/636 (45%), Gaps = 107/636 (16%)

Query: 5   KLFHLQILKHGFAY-DVFLCNTLINVYVRVG----------------------------- 34
           +  H +I+KHG  Y  VFL N L+N+YV+ G                             
Sbjct: 32  RCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHAK 91

Query: 35  --DLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSV 92
             +L SA ++FDE+P  +SVSW  ++ GY H G+   A   F  MV +G    ++   +V
Sbjct: 92  AGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNV 151

Query: 93  LRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST------------ 140
           L +C          G +VH  V+K  Q+    V+N L+ MY  C +S             
Sbjct: 152 LASC--AAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLK 209

Query: 141 ------------------DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
                             D A  +F+++   D++SWNSII+ Y  +G  I   + FS M 
Sbjct: 210 DTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFML 269

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           +     SLKP+++T GS+++A  +       L +QI A + +A +     VG+AL+S +A
Sbjct: 270 KSS---SLKPDKFTLGSVLSACANR--ESLKLGKQIHAHIVRADVDIAGAVGNALISMYA 324

Query: 243 RLGNFYYARKIFE--QMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
           + G    A +I E       NV++   L++G                             
Sbjct: 325 KSGAVEVAHRIVEITGTPSLNVIAFTSLLDG----------------------------- 355

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           Y K G ID +R++F  +  +D V+W  MI G  QNG   +A++ F  M R+G   +N++L
Sbjct: 356 YFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTL 415

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF-FLMP 419
            + LS  +SL  +  G+Q+H   ++L   S VSV NAL+++Y+ +G +    K+F  +  
Sbjct: 416 AAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICS 475

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             D ++W S+I + A    L +EA++ +  M R    P+ +T++ +L+A +   + + G 
Sbjct: 476 YRDTLTWTSMILSLA-QHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQG- 533

Query: 480 QVHAQVIK--YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-Y 536
           + +  ++K  +N+   ++    ++   G+ G +++       M    D V+W S++S   
Sbjct: 534 KSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCR 593

Query: 537 IHNEL-LPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
           +H  + L K       ++       +   A  LSAC
Sbjct: 594 VHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSAC 629



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 177/731 (24%), Positives = 305/731 (41%), Gaps = 168/731 (22%)

Query: 106 FGMQVHCLVLKSNQTFDGL-VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISV 164
            G  +H  ++K    + G+ ++N L+ +Y     S+D A R+F+E+  +   SWN+I+S 
Sbjct: 30  IGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSD-AHRLFDEMPLKTTFSWNTILSA 88

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
           +++ G+  S  ++F  +         +P+  ++ ++I                       
Sbjct: 89  HAKAGNLDSARRVFDEIP--------QPDSVSWTTMIV---------------------- 118

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRRK 274
                          G+  LG F  A   F +M+            NV++     +    
Sbjct: 119 ---------------GYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDV 163

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK+VH ++++ G   +V V N L+NMYAKCG    ++ VF  M  KD+ +WNTMIS   Q
Sbjct: 164 GKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQ 223

Query: 335 NGCYEEAIMNFCAMRRDGLMSSN--------------------------------FSLIS 362
              ++ A+  F  M    ++S N                                F+L S
Sbjct: 224 FCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGS 283

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK--------- 413
            LS+CA+   + LG+QIH   ++  +D   +V NAL+S+YA +G +    +         
Sbjct: 284 VLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPS 343

Query: 414 ------------------------VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
                                   +F  +   D V+W ++I  +A +  L+S+A+  +  
Sbjct: 344 LNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQN-GLISDALVLFRL 402

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M R G  PN  T   +L+  SS +    G Q+HA  I+    +  ++ NAL++ Y + G 
Sbjct: 403 MIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGS 462

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           + D  KIF  +   RD ++W SMI     + L  +A+ L   M++   + DH T+  VLS
Sbjct: 463 IKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLS 522

Query: 570 ACASVATLERG-------MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           AC  V  +E+G         VH       +E      + ++D+  + G ++ A  F   M
Sbjct: 523 ACTHVGLVEQGKSYFNLMKNVHN------IEPTSSHYACMIDLLGRAGLLEEAYNFIRNM 576

Query: 623 PVR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD--HVTFVGVLSAC------- 672
           P+  +V +W S++S    H + D A     ++ L  P     ++     LSAC       
Sbjct: 577 PIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAA 636

Query: 673 -------SHAGLVDEGFK--HFKSMSQVYG----LIPQLEQFSCMVDLLGRAGELDKIEE 719
                    A   ++GF     K+   ++G    L PQ +   CM+          KI +
Sbjct: 637 KVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMI---------SKIWK 687

Query: 720 FINKMPITPNS 730
            I KM   P++
Sbjct: 688 EIKKMGFIPDT 698



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 135/310 (43%), Gaps = 17/310 (5%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +V    +L++ Y ++GD+  A  +FD +  R+ V+W  ++ GY   G+ ++A  +F+ M+
Sbjct: 345 NVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMI 404

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           R G   N Y L +VL        +    G Q+H + ++  +     V N LI MY     
Sbjct: 405 REGPKPNNYTLAAVLSVISSL--ASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGS 462

Query: 139 STDCARRIFEEI-ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
             D AR+IF  I   RD ++W S+I   +Q G      +LF +M     R +LKP+  T+
Sbjct: 463 IKD-ARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKM----LRINLKPDHITY 517

Query: 198 -GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
            G L    +  ++        ++  V      S  Y  + ++    R G    A      
Sbjct: 518 VGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHY--ACMIDLLGRAGLLEEAYNFIRN 575

Query: 257 M-IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN-----GLVNMYAKCGTIDDS 310
           M I+ +VV+   L+   R  K V    + +    ++   N      L N  + CG  +D+
Sbjct: 576 MPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDA 635

Query: 311 RSVFRFMIGK 320
             V + M  K
Sbjct: 636 AKVRKSMKDK 645


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 274/788 (34%), Positives = 443/788 (56%), Gaps = 57/788 (7%)

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
           +H  ++ S    D  ++N+LI +     +  D AR +F+++  ++LI+W+S++S+YSQ+G
Sbjct: 49  IHGQIIVSGLQSDTFLANILINVCSKS-DRVDNARVVFDKMPHKNLITWSSMVSMYSQQG 107

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGL 227
            +     +F  +QR+   +   PNE+   S+I A      V  G+    Q+   V ++G 
Sbjct: 108 YSEEALMVFVDLQRKSGEH---PNEFVLASVIRACTQLGVVEKGA----QLHGFVVRSGF 160

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------- 274
             D+YVG++L+  +++ GN   AR +F+Q+ +K  V+   ++ G  K             
Sbjct: 161 DQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQ 220

Query: 275 ----------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
                                       GK++H Y++R G    V+V N L++ Y KC  
Sbjct: 221 MRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNR 280

Query: 307 IDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
           +   R +F  M+ K+ +SW TMISG  QN    EA+  F  M R G     F+  S L+S
Sbjct: 281 VKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTS 340

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSW 426
           C S   +  G+Q+H   +K  L+SD  V N L+ +YA +  L    KVF +M E + +S+
Sbjct: 341 CGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISY 400

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
           N++I  ++  E L SEA++ + +MR   + P+ +TF+++L  ++S    +L  Q+H  +I
Sbjct: 401 NAMIEGYSSQEKL-SEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLII 459

Query: 487 KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAM 546
           K+ V+ +    +AL+  Y KC  + D   +F  M+E+ D V WN+M  GY  +    +A+
Sbjct: 460 KFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEK-DIVVWNAMFFGYTQHLENEEAL 518

Query: 547 NLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMY 606
            L   +    Q+ + FTFA +++A +++A+L  G + H   V+  L+F   + +ALVDMY
Sbjct: 519 KLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMY 578

Query: 607 SKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFV 666
           +KCG I+ A + F+    R+V  WNSMIS +A+HG  ++AL +F +M  +G  P++VTFV
Sbjct: 579 AKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFV 638

Query: 667 GVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPI 726
            VLSACSHAG V++G  HF SM   +G+ P  E ++C+V LLGR+G+L + +EFI KMPI
Sbjct: 639 AVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPI 697

Query: 727 TPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVA 786
            P +++WR++L AC  A     ELG+ AA M    +P+++ +Y+LL+N++AS G W DV 
Sbjct: 698 EPAAIVWRSLLSACRIAG--NVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVK 755

Query: 787 KARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVP 846
           K R  M  +EV KE G SW+ + + V+VF+A D +H E D I   L  L Q ++ AGYVP
Sbjct: 756 KVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREAD-IGSVLDILIQHIKGAGYVP 814

Query: 847 QTKFALFD 854
                L +
Sbjct: 815 DATALLMN 822



 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 201/681 (29%), Positives = 338/681 (49%), Gaps = 66/681 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K+ H QI+  G   D FL N LINV  +   + +A  +FD+MP +N ++W+ +VS Y+ +
Sbjct: 47  KIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQ 106

Query: 65  GMSNEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           G S EA  +F ++ R +G   N + L SV+RAC + G    + G Q+H  V++S    D 
Sbjct: 107 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGV--VEKGAQLHGFVVRSGFDQDV 164

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V   LI  Y S   + + AR +F+++  +  ++W +II+ Y++ G +    +LF++M+ 
Sbjct: 165 YVGTSLIDFY-SKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRE 223

Query: 184 EGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
                ++ P+ Y   S+++A +    L G    +QI A V + G   D+ V + L+  + 
Sbjct: 224 T----NVVPDRYVVSSVLSACSMLEFLEGG---KQIHAYVLRRGTEMDVSVVNVLIDFYT 276

Query: 243 RLGNFYYARKIFEQMIQKNVVS-----------------------MN------------- 266
           +       RK+F+QM+ KN++S                       MN             
Sbjct: 277 KCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTS 336

Query: 267 -----GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                G  E   +G++VH Y I++ L     V NGL++MYAK   + D++ VF  M  ++
Sbjct: 337 VLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQN 396

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            +S+N MI G        EA+  F  MR      S  + +S L   ASL  + L +QIHG
Sbjct: 397 VISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHG 456

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             +K G+  D+   +AL+ +Y+   Y+     VF  M E D V WN++   F  ++ L +
Sbjct: 457 LIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMF--FGYTQHLEN 514

Query: 442 -EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
            EA+K Y  ++ +   PN  TF  ++ AAS+ +  + G Q H Q++K  +     + NAL
Sbjct: 515 EEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNAL 574

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD 560
           +  Y KCG +++  K+F   S  RD V WNSMIS +  +    +A+ +   MM+ G + +
Sbjct: 575 VDMYAKCGSIEEARKMF-NSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPN 633

Query: 561 HFTFATVLSACASVATLERGME----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
           + TF  VLSAC+    +E G+     +   G++   E      + +V +  + G++  A 
Sbjct: 634 YVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEH----YACVVSLLGRSGKLFEAK 689

Query: 617 RFFDLMPVRN-VYSWNSMISG 636
            F + MP+      W S++S 
Sbjct: 690 EFIEKMPIEPAAIVWRSLLSA 710



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 161/580 (27%), Positives = 283/580 (48%), Gaps = 62/580 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K A+L H  +++ GF  DV++  +LI+ Y + G++  A  +FD++ ++ +V+W  I++GY
Sbjct: 147 KGAQL-HGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGY 205

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKF---GMQVHCLVLKSN 118
           T  G S  + ++F +M     + +RY + SVL AC     S  +F   G Q+H  VL+  
Sbjct: 206 TKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSAC-----SMLEFLEGGKQIHAYVLRRG 260

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              D  V NVLI  Y  C       R++F+++  +++ISW ++IS Y Q        KLF
Sbjct: 261 TEMDVSVVNVLIDFYTKC-NRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLF 319

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
             M R G+    KP+ +   S++T+  S  ++  G    +Q+ A   KA L SD +V + 
Sbjct: 320 GEMNRLGW----KPDGFACTSVLTSCGSREALEQG----RQVHAYTIKANLESDEFVKNG 371

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---------------------- 274
           L+  +A+      A+K+F+ M ++NV+S N ++EG                         
Sbjct: 372 LIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPS 431

Query: 275 -------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                               K++HG +I+ G+   +  G+ L+++Y+KC  + D+R VF 
Sbjct: 432 LLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFE 491

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M  KD V WN M  G  Q+   EEA+  +  ++      + F+  + +++ ++L  +  
Sbjct: 492 EMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRH 551

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           GQQ H + +K+GLD    V+NAL+ +YA  G +    K+F      D V WNS+I   A 
Sbjct: 552 GQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHA- 610

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
                 EA+  + +M + G  PN VTF+ +L+A S     + G      +  + +   T 
Sbjct: 611 QHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTE 670

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
               ++S  G+ G++ + ++   +M      + W S++S 
Sbjct: 671 HYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSA 710



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/475 (30%), Positives = 246/475 (51%), Gaps = 20/475 (4%)

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
           ++ N    R+ F  ++Q ++ S N ++      K +HG +I SGL     + N L+N+ +
Sbjct: 19  QIPNLRPKRREFANLLQLSI-SRNPIIHY----KIIHGQIIVSGLQSDTFLANILINVCS 73

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM-RRDGLMSSNFSLI 361
           K   +D++R VF  M  K+ ++W++M+S   Q G  EEA+M F  + R+ G   + F L 
Sbjct: 74  KSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLA 133

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S + +C  LG +  G Q+HG  ++ G D DV V  +L+  Y+  G +     VF  + E 
Sbjct: 134 SVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK 193

Query: 422 DQVSWNSVIGAFAD-SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
             V+W ++I  +     + VS  ++ +  MR     P+     ++L+A S     + G Q
Sbjct: 194 TAVTWTTIIAGYTKCGRSAVS--LELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQ 251

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +HA V++     + ++ N L+  Y KC  +    K+F +M   ++ +SW +MISGY+ N 
Sbjct: 252 IHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMV-VKNIISWTTMISGYMQNS 310

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
              +AM L   M + G + D F   +VL++C S   LE+G +VHA  ++A LE D  + +
Sbjct: 311 FDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKN 370

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
            L+DMY+K   +  A + FD+M  +NV S+N+MI GY+      +AL LF +M++    P
Sbjct: 371 GLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPP 430

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD 715
             +TFV +L        V       +   Q++GLI    +F   +DL   +  +D
Sbjct: 431 SLLTFVSLLG-------VSASLFALELSKQIHGLII---KFGVSLDLFAGSALID 475



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 222/491 (45%), Gaps = 47/491 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H   +K     D F+ N LI++Y +   L  A K+FD M ++N +S+  ++ GY
Sbjct: 348 EQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGY 407

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGM----QVHCLVLKS 117
           + +   +EA ++F EM    F  +     S+L      G S   F +    Q+H L++K 
Sbjct: 408 SSQEKLSEALELFHEMRVRLFPPSLLTFVSLL------GVSASLFALELSKQIHGLIIKF 461

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
             + D    + LI +Y  C    D AR +FEE+  +D++ WN++   Y+Q  +     KL
Sbjct: 462 GVSLDLFAGSALIDVYSKCSYVKD-ARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKL 520

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           +S +Q        KPNE+TF +LITAA  S L+     QQ    + K GL    +V +AL
Sbjct: 521 YSTLQFS----RQKPNEFTFAALITAA--SNLASLRHGQQFHNQLVKMGLDFCPFVTNAL 574

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYL------IRSGLFDMV 291
           V  +A+ G+   ARK+F   I ++VV  N ++    +  E    L      ++ G+    
Sbjct: 575 VDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNY 634

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIG----KDSVSWNTMISGLDQNGCYEEAIMNFCA 347
                +++  +  G ++D  + F  M G      +  +  ++S L ++G   EA   F  
Sbjct: 635 VTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEA-KEF-- 691

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAG 406
           + +  +  +     S LS+C   G + LG+  +   + +  D   S S  LLS ++A  G
Sbjct: 692 IEKMPIEPAAIVWRSLLSACRIAGNVELGK--YAAEMAISTDPKDSGSYILLSNIFASKG 749

Query: 407 YLSRCLKVFFLMPEHDQV-----SW---NSVIGAFADSEALVSEA-VKYYLD-----MRR 452
             +   KV   M   + V     SW   N+ +  F   +    EA +   LD     ++ 
Sbjct: 750 MWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREADIGSVLDILIQHIKG 809

Query: 453 AGWSPNGVTFI 463
           AG+ P+    +
Sbjct: 810 AGYVPDATALL 820


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 275/769 (35%), Positives = 427/769 (55%), Gaps = 56/769 (7%)

Query: 218 ILAMVKKAGLLSDLYVGSALVSGFARLG--NFYYARKIFEQMIQKNVVSMNGL------- 268
           + A + +A   + L++ ++L++ + RLG     +A ++ ++M ++N VS N L       
Sbjct: 21  VHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAVSYNLLISSYSRA 80

Query: 269 -MEGR----------------------------------RKGKEVHGYLIRSGLFDMVAV 293
            + GR                                  R GK VH   +  GL + V +
Sbjct: 81  GLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFL 140

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
            N L +MYA CG + ++R VF      D VSWN+++SG  + G  EE +  F  M   GL
Sbjct: 141 SNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGL 200

Query: 354 MSSNFSLISTLSSCASLGWI--MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
             ++F+L S +  CAS   +   + + +HG  +K GLD+D+ +++A++ +YA  G L+  
Sbjct: 201 GWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNA 260

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVS-----EAVKYYLDMRRAGWSPNGVTFINIL 466
           + +F  +P+ + + +N++I  F   EA V      EA+  Y +M+  G  P+  TF +IL
Sbjct: 261 VALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSIL 320

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
            A +       G Q+H QV+K++  ++  I +AL+  Y   G M+D  + F R   ++D 
Sbjct: 321 RACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCF-RSLPKQDI 379

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           V+W SMISG + NEL  KA+ L    +  G + D FT ++V++ACAS+A    G ++   
Sbjct: 380 VTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCL 439

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            ++        +G++ + M ++ G +D  +R F  M  R+V SW+++IS +A+HG    A
Sbjct: 440 AIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDA 499

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           L +F++M      P+ VTF+ VL+ACSH GLVD+G ++++ M   YGL P ++  +C+VD
Sbjct: 500 LRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVD 559

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           LLGRAG L   E FI       ++++WR++L A CR +    E G+  A+ + ++EP ++
Sbjct: 560 LLGRAGRLADAEAFIRDSAFHDDAVVWRSLL-ASCRIH-GDMERGQLVADQIMDLEPTSS 617

Query: 767 VNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKD 826
            +YV+L NMY   G+    +K R  MKE  VKKE G SW+ ++ GVH FVAGD+SHPE +
Sbjct: 618 ASYVILYNMYLDAGELSLASKTRDLMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESN 677

Query: 827 LIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPI 885
            IY+KL E+  K+              D    S+++LV  HSEKIAVAF ++      PI
Sbjct: 678 AIYKKLAEMLSKIEKLANTDNASTG-SDGISSSEQNLVGCHSEKIAVAFGMIHLPQSAPI 736

Query: 886 RIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           R+MKNLRVC DCHS  K IS    REI+LRD  RFHHF  G CSCGDYW
Sbjct: 737 RVMKNLRVCRDCHSTMKLISGSENREIILRDGIRFHHFRGGSCSCGDYW 785



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 183/697 (26%), Positives = 308/697 (44%), Gaps = 104/697 (14%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLAS--ASKLFDEMPDRNSVSWACIVSGYTHKG 65
           H  I +      +FL N+L+  Y R+G  A   A++L DEMP RN+VS+  ++S Y+  G
Sbjct: 22  HAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAVSYNLLISSYSRAG 81

Query: 66  MSNEACKMF-KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           +   A + F +    AG  ++R+   + L AC        + G  VH + +         
Sbjct: 82  LPGRALETFARARAAAGLRVDRFTYAAALAACSR--ALDLRTGKAVHAMTVLDGLGNGVF 139

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           +SN L +MY SC E  + ARR+F+  E  D +SWNS++S Y + G      K+FS M   
Sbjct: 140 LSNSLASMYASCGEMGE-ARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHH 198

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G  +    N +  GS+I    S    G ++ + +   V KAGL +DL++ SA++  +A+ 
Sbjct: 199 GLGW----NSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKR 254

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------ 274
           G    A  +F+ +   NV+  N ++ G  +                              
Sbjct: 255 GALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEF 314

Query: 275 -----------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                            GK++HG +++    D   +G+ L+++Y+  G ++D    FR +
Sbjct: 315 TFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSL 374

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             +D V+W +MISG  QN  +E+A+  F      GL    F++ S +++CASL     G+
Sbjct: 375 PKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGE 434

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           QI    +K G +   ++ N+ + + A +G +    + F  M   D VSW++VI + A   
Sbjct: 435 QIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQ-H 493

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
               +A++ + +M  A  +PN VTF+N+L A S   +   G + + +++K       TI+
Sbjct: 494 GCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYY-EIMKNEYGLSPTIK 552

Query: 498 NA--LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI-SGYIHNELLPKAMNLVWFMMQ 554
           +   ++   G+ G + D E      +   D V W S++ S  IH +            M+
Sbjct: 553 HVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGD------------ME 600

Query: 555 RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
           RGQ +         ++ AS                            L +MY   G +  
Sbjct: 601 RGQLVADQIMDLEPTSSASYVI-------------------------LYNMYLDAGELSL 635

Query: 615 ASRFFDLMPVRNV-----YSWNSMISGYARHGHGDKA 646
           AS+  DLM  R V      SW  + SG      GDK+
Sbjct: 636 ASKTRDLMKERGVKKEPGLSWIELRSGVHSFVAGDKS 672



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 142/624 (22%), Positives = 281/624 (45%), Gaps = 84/624 (13%)

Query: 92  VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY-----GSCLESTDCARRI 146
           +LR+C     +       VH  + +++ T    + N L+A Y     G+ L     A R+
Sbjct: 8   LLRSC-----TALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLH----AARL 58

Query: 147 FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS 206
            +E+  R+ +S+N +IS YS+ G      + F+R +       L+ + +T+ + + A   
Sbjct: 59  IDEMPRRNAVSYNLLISSYSRAGLPGRALETFARARAA---AGLRVDRFTYAAALAACSR 115

Query: 207 SV--LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS 264
           ++   +G    + + AM    GL + +++ ++L S +A  G    AR++F+   + + VS
Sbjct: 116 ALDLRTG----KAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVS 171

Query: 265 MNGLMEG-------------------------------------------RRKGKEVHGY 281
            N L+ G                                           R   + VHG 
Sbjct: 172 WNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGC 231

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY--- 338
           ++++GL   + + + +++MYAK G + ++ ++F+ +   + + +N MI+G  ++      
Sbjct: 232 VVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGK 291

Query: 339 ---EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
               EA+  +  M+  G+  S F+  S L +C   G    G+QIHG+ LK     D  + 
Sbjct: 292 EVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIG 351

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           +AL+ LY+D+G +    + F  +P+ D V+W S+I     +E L  +A++ + +    G 
Sbjct: 352 SALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNE-LFEKALRLFQESICYGL 410

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            P+  T  +++ A +S ++ + G Q+    IKY     T + N+ +    + G++D   +
Sbjct: 411 KPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTR 470

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
            F  M E RD VSW+++IS +  +     A+ +   MM      +  TF  VL+AC+   
Sbjct: 471 RFQEM-ESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGG 529

Query: 576 TLERGMEVHAC-----GVRACLEFDVVIGSALVDMYSKCGRIDYASRFF-DLMPVRNVYS 629
            ++ G+  +       G+   ++    +    VD+  + GR+  A  F  D     +   
Sbjct: 530 LVDDGLRYYEIMKNEYGLSPTIKHVTCV----VDLLGRAGRLADAEAFIRDSAFHDDAVV 585

Query: 630 WNSMISGYARHGHGDKALTLFSQM 653
           W S+++    HG  ++   +  Q+
Sbjct: 586 WRSLLASCRIHGDMERGQLVADQI 609



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 117/482 (24%), Positives = 212/482 (43%), Gaps = 60/482 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H   +  G    VFL N+L ++Y   G++  A ++FD   + + VSW  ++SGY
Sbjct: 120 RTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGY 179

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   E  K+F  M   G   N +ALGS+++ C      G      VH  V+K+    
Sbjct: 180 VRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDA 239

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR----GDTIS--VF 175
           D  +++ +I MY      T+ A  +F+ +   ++I +N++I+ + +     G  +S    
Sbjct: 240 DLFLASAMIDMYAKRGALTN-AVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREAL 298

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY-LLQQILAMVKKAGLLSDLYVG 234
            L+S MQ  G    ++P+E+TF S++ A     L+G +   +QI   V K     D Y+G
Sbjct: 299 SLYSEMQSRG----MQPSEFTFSSILRACN---LAGEFGFGKQIHGQVLKHSFHDDDYIG 351

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG----------------------- 271
           SAL+  ++  G      + F  + ++++V+   ++ G                       
Sbjct: 352 SALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLK 411

Query: 272 ------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
                              R G+++    I+ G     A+GN  ++M A+ G +D     
Sbjct: 412 PDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRR 471

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           F+ M  +D VSW+ +IS   Q+GC  +A+  F  M    +  +  + ++ L++C+  G +
Sbjct: 472 FQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLV 531

Query: 374 MLGQQIHGEGLK--LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ-VSWNSVI 430
             G + + E +K   GL   +     ++ L   AG L+           HD  V W S++
Sbjct: 532 DDGLRYY-EIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLL 590

Query: 431 GA 432
            +
Sbjct: 591 AS 592



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 142/312 (45%), Gaps = 20/312 (6%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q+LKH F  D ++ + LI++Y   G +    + F  +P ++ V+W  ++SG    
Sbjct: 333 KQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQN 392

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            +  +A ++F+E +  G   + + + SV+ AC     +  + G Q+ CL +K        
Sbjct: 393 ELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVA--RTGEQIQCLAIKYGFNRFTA 450

Query: 125 VSNVLIAMYGSCLES--TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
           + N  I M   C  S   D   R F+E+E+RD++SW+++IS ++Q G      ++F+ M 
Sbjct: 451 MGNSFIHM---CARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMM 507

Query: 183 REGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
                  + PNE TF +++TA ++  ++       +I  M  + GL   +   + +V   
Sbjct: 508 NA----KVAPNEVTFLNVLTACSHGGLVDDGLRYYEI--MKNEYGLSPTIKHVTCVVDLL 561

Query: 242 ARLGNFYYARK-IFEQMIQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG--- 296
            R G    A   I +     + V    L+   R  G    G L+   + D+    +    
Sbjct: 562 GRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYV 621

Query: 297 -LVNMYAKCGTI 307
            L NMY   G +
Sbjct: 622 ILYNMYLDAGEL 633


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/643 (39%), Positives = 380/643 (59%), Gaps = 7/643 (1%)

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           N L+++Y KC   DD+ +VF  +  K+  SW  M++   +N  ++   + F  M   G+ 
Sbjct: 14  NLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGIN 73

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
                +   LS+C     I +G+ I    L  G++ +  V  AL+SLY   G+ +    V
Sbjct: 74  PGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASV 133

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  M   D V+W++++ A+A +     EA+  +  M   G +PN VT ++ L A +S   
Sbjct: 134 FLRMSHRDVVAWSAMVAAYARN-GHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGD 192

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            + G  +H +V    + +   +  AL++ YGKCG ++   + F ++ E+ + V+W+++ +
Sbjct: 193 LRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEK-NVVAWSAISA 251

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA--CGVRACL 592
            Y  N+    A+ ++  M   G   +  TF +VL ACA++A L++G  +H     +   L
Sbjct: 252 AYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGL 311

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
           E DV + +ALV+MYSKCG +  A   FD +   ++  WNS+I+  A+HG  +KAL LF +
Sbjct: 312 ESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFER 371

Query: 653 MKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG 712
           M+L+G  P  +TF  VL ACSHAG++D+G KHF S    +G+ P+ E F CMVDLLGRAG
Sbjct: 372 MRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAG 431

Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLL 772
            +   E+ +  MP  P+ + W   LGAC     R  +    AA  LF+++P+    YVLL
Sbjct: 432 WIVDSEDLLLHMPFEPHPVAWMAFLGAC--RTYRNMDGAIWAAENLFQLDPRKRAPYVLL 489

Query: 773 ANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKL 832
           +NMYA  G+W DVA+ R+AM+     KEAG SW+ +KD VH F++GD  HP    I+ +L
Sbjct: 490 SNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAEL 549

Query: 833 KELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNL 891
           + L + M+ AGYVP T+  L D++ E KE +V YHSEK+A+AF +LT     PIR++KNL
Sbjct: 550 QRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVKNL 609

Query: 892 RVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           RVC DCH+A KFISK+V REIV+RD NRFH F +G CSCGDYW
Sbjct: 610 RVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 169/353 (47%), Gaps = 7/353 (1%)

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           +LG   +  + N L+ LY         L VF  +   +  SW  ++ AFA++        
Sbjct: 3   ELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDF-DRCW 61

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
            ++  M   G +P  V     L+A +      +G  +   ++   +  E+ ++ AL+S Y
Sbjct: 62  LFFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLY 121

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
           GK G   D   +F RMS  RD V+W++M++ Y  N    +A+ L   M   G   +  T 
Sbjct: 122 GKLGHCTDAASVFLRMSH-RDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTL 180

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
            + L ACAS+  L  G  +H       ++  VV+G+ALV++Y KCGRI+ A+  F  +  
Sbjct: 181 VSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVE 240

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK- 683
           +NV +W+++ + YAR+     A+ +  +M L+G  P+  TFV VL AC+    + +G + 
Sbjct: 241 KNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRI 300

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP----ITPNSLI 732
           H +      GL   +   + +V++  + G L       +K+     +  NSLI
Sbjct: 301 HERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLI 353



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 161/308 (52%), Gaps = 4/308 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+ +   ++ +G+ +   V   LV++Y K G   D+ SVF  M  +D V+W+ M++   +
Sbjct: 95  GRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYAR 154

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG   EA+  F  M  DG+  +  +L+S L +CASLG +  G  +H      G+ S V V
Sbjct: 155 NGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVV 214

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             AL++LY   G +    + F  + E + V+W+++  A+A ++    +A++    M   G
Sbjct: 215 GTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDR-NRDAIRVLHRMDLEG 273

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQ--VIKYNVANETTIENALLSCYGKCGEMDD 512
            +PN  TF+++L A ++ +  K G ++H +  V+   + ++  +  AL++ Y KCG +  
Sbjct: 274 LAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLAL 333

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
              +F +++   D V WNS+I+    +    KA+ L   M   G +    TF +VL AC+
Sbjct: 334 AGNMFDKIAH-LDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACS 392

Query: 573 SVATLERG 580
               L++G
Sbjct: 393 HAGMLDQG 400



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 111/467 (23%), Positives = 206/467 (44%), Gaps = 62/467 (13%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G+  + FLCN LI++Y +      A  +F  +  +N  SW  +++ +      +     F
Sbjct: 5   GWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFF 64

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
           + M+  G       +   L AC +        G  +   +L +    + +V   L+++YG
Sbjct: 65  RGMLLQGINPGEVGISIFLSACTDA--REITIGRSIQLAILGTGIEEESIVQTALVSLYG 122

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
                TD A  +F  +  RD+++W+++++ Y++ G       LF +M  +G    + PN+
Sbjct: 123 KLGHCTDAA-SVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDG----VAPNK 177

Query: 195 YTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK 252
            T  S + A  S   + SG+ + Q+    V+  G+ S + VG+ALV+ + + G    A +
Sbjct: 178 VTLVSGLDACASLGDLRSGALMHQR----VEAQGIQSGVVVGTALVNLYGKCGRIEAAAE 233

Query: 253 IFEQMIQKNVV---------------------------------------------SMNG 267
            F Q+++KNVV                                             ++  
Sbjct: 234 AFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAA 293

Query: 268 LMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
           L +GRR  + +H  ++  GL   V V   LVNMY+KCG +  + ++F  +   D V WN+
Sbjct: 294 LKQGRRIHERIH--VLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNS 351

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL-KL 386
           +I+   Q+G  E+A+  F  MR +GL  +  +  S L +C+  G +  G++     +   
Sbjct: 352 LIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDH 411

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           G+  +      ++ L   AG++     +   MP E   V+W + +GA
Sbjct: 412 GIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGA 458



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 200/445 (44%), Gaps = 40/445 (8%)

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N+LI +Y  C +  D A  +F  I+++++ SW  +++ +++  D    +  F  M  +G 
Sbjct: 14  NLLIDLYTKC-DRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGI 72

Query: 187 RYS-----------LKPNEYTFGSLITAAY--SSVLSGSYLLQQILAMVKKAGLLSD--- 230
                             E T G  I  A   + +   S +   ++++  K G  +D   
Sbjct: 73  NPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAAS 132

Query: 231 ---------LYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSM-NGL-----MEG 271
                    +   SA+V+ +AR G+   A  +F QM    +  N V++ +GL     +  
Sbjct: 133 VFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGD 192

Query: 272 RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
            R G  +H  +   G+   V VG  LVN+Y KCG I+ +   F  ++ K+ V+W+ + + 
Sbjct: 193 LRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAA 252

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG--EGLKLGLD 389
             +N    +AI     M  +GL  ++ + +S L +CA++  +  G++IH     L  GL+
Sbjct: 253 YARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLE 312

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           SDV V  AL+++Y+  G L+    +F  +   D V WNS+I   A       +A++ +  
Sbjct: 313 SDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNA-QHGQTEKALELFER 371

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCG 508
           MR  G  P  +TF ++L A S   M   G +     I  + +  E      ++   G+ G
Sbjct: 372 MRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAG 431

Query: 509 EMDDCEKIFARMSERRDEVSWNSMI 533
            + D E +   M      V+W + +
Sbjct: 432 WIVDSEDLLLHMPFEPHPVAWMAFL 456



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 9/204 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +   L H ++   G    V +   L+N+Y + G + +A++ F ++ ++N V+W+ I + Y
Sbjct: 194 RSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAY 253

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVH--CLVLKSNQ 119
                + +A ++   M   G   N     SVL AC     +  K G ++H    VL    
Sbjct: 254 ARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDAC--AAIAALKQGRRIHERIHVLGGGL 311

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D  V   L+ MY  C  +   A  +F++I   DL+ WNS+I+  +Q G T    +LF 
Sbjct: 312 ESDVYVLTALVNMYSKC-GNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFE 370

Query: 180 RMQREGFRYSLKPNEYTFGSLITA 203
           RM+ EG    L+P   TF S++ A
Sbjct: 371 RMRLEG----LQPTIITFTSVLFA 390



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 46/92 (50%)

Query: 9   LQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSN 68
           + +L  G   DV++   L+N+Y + G+LA A  +FD++   + V W  +++     G + 
Sbjct: 304 IHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTE 363

Query: 69  EACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           +A ++F+ M   G         SVL AC   G
Sbjct: 364 KALELFERMRLEGLQPTIITFTSVLFACSHAG 395


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 282/826 (34%), Positives = 450/826 (54%), Gaps = 36/826 (4%)

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           ++ + L+ +D A  + + +E + + + N+  +   QR           ++     +++L 
Sbjct: 17  LHTASLDRSDIASAVLD-LEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLL 75

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           P     G+ I + Y+   S         A+ ++     +LY  + LV+ FA  G      
Sbjct: 76  PGNLILGNHIVSMYAHCDSPGDAKAAFDALEQR-----NLYSWTGLVAAFAISGQSKETL 130

Query: 252 KIFEQMIQKNV----------VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
           +  E+M Q  V          +   G  E  R G  +H  ++ S L     V N L+NMY
Sbjct: 131 RALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMY 190

Query: 302 AKCGTIDDSRSVFRFM-IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
            KCG++  ++ VF  M   ++ +SW+ M      +G   EA+ +F  M   G+ ++  ++
Sbjct: 191 KKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAM 250

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           ++ LS+C+S   +  G+ IH      G +S++ V+NA++++Y   G +    KVF  M E
Sbjct: 251 VTILSACSSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDE 310

Query: 421 --HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
              D VSWN ++ A+  ++    +A++ Y   +R     + VT++++L+A SS     LG
Sbjct: 311 ALRDVVSWNIMLSAYVHNDR-GKDAIQLY---QRMQLRADKVTYVSLLSACSSAEDVGLG 366

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
             +H Q++   +     + NAL+S Y KCG   +   +F +M E+R  +SW ++IS Y+ 
Sbjct: 367 RVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKM-EQRSIISWTTIISAYVR 425

Query: 539 NELLPKAMNLVWFMMQ-----RGQRL--DHFTFATVLSACASVATLERGMEVHACGVRAC 591
             L+ +A +L   M++       QR+  D   F T+L+ACA V+ LE+G  V        
Sbjct: 426 RRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCG 485

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKALTLF 650
           L  D  +G+A+V++Y KCG I+   R FD +  R +V  WN+MI+ YA+ G   +AL LF
Sbjct: 486 LSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLF 545

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY-GLIPQLEQFSCMVDLLG 709
            +M+++G  PD  +FV +L ACSH GL D+G  +F SM+  Y  +   ++ F C+ DLLG
Sbjct: 546 WRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLG 605

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
           R G L + EEF+ K+P+ P+++ W ++L AC   N R  +  ++ AN L  +EP+ A  Y
Sbjct: 606 RGGRLKEAEEFLEKLPVKPDAVAWTSLLAAC--RNHRDLKRAKEVANKLLRLEPRCATGY 663

Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIY 829
           V L+N+YA   KW  VAK RK M E  VKKE G S + +   +H F  GD++HP    I 
Sbjct: 664 VALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIR 723

Query: 830 EKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNS-KLPIRIM 888
           E+L +L+ +M++ GYVP TK  L  ++ + KE L+  HSE++A+A  L       P+R+ 
Sbjct: 724 EELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVT 783

Query: 889 KNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           KNLRVC DCH+A K ISKI GR+IV+RD  RFH F DGKCSC DYW
Sbjct: 784 KNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 829



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 143/596 (23%), Positives = 267/596 (44%), Gaps = 64/596 (10%)

Query: 3   DAKLFHLQILKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           + +  H   +KH     ++ L N ++++Y        A   FD +  RN  SW  +V+ +
Sbjct: 61  EGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAF 120

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G S E  +  + M + G   +     + L +C +  P   + G+++H +V+ S    
Sbjct: 121 AISGQSKETLRALERMRQDGVRPDAVTFITALGSCGD--PESLRDGIRIHQMVVDSRLEI 178

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIE-TRDLISWNSIISVYSQRGDTISVFKLFSR 180
           D  VSN L+ MY  C  S   A+R+F ++E TR++ISW+ +   ++  G+     + F  
Sbjct: 179 DPKVSNALLNMYKKC-GSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRF 237

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVL-SGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           M   G    +K  +    ++++A  S  L     L+   +A+   +G  S+L V +A+++
Sbjct: 238 MLLLG----IKATKSAMVTILSACSSPALVQDGRLIHSCIAL---SGFESELLVANAVMT 290

Query: 240 GFARLGNFYYARKIFEQMIQ--KNVVSMNGLMEG-----RRK------------------ 274
            + R G    ARK+F+ M +  ++VVS N ++       R K                  
Sbjct: 291 MYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQLRADKVTY 350

Query: 275 ---------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                          G+ +H  ++   L   V VGN LV+MYAKCG+  ++R+VF  M  
Sbjct: 351 VSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQ 410

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAM---RRDG----LMSSNFSLISTLSSCASLGW 372
           +  +SW T+IS   +     EA   F  M    ++G    +     + ++ L++CA +  
Sbjct: 411 RSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSA 470

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIG 431
           +  G+ +  +    GL SD +V  A+++LY   G +    ++F  +     V  WN++I 
Sbjct: 471 LEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIA 530

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA 491
            +A       EA+K +  M   G  P+  +F++IL A S   +   G      +      
Sbjct: 531 VYAQF-GQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRN 589

Query: 492 NETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
              TI++   +    G+ G + + E+   ++  + D V+W S+++   ++  L +A
Sbjct: 590 VTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRA 645



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 137/272 (50%), Gaps = 19/272 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVS 59
           +D +L H  I   GF  ++ + N ++ +Y R G +  A K+FD M +  R+ VSW  ++S
Sbjct: 264 QDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLS 323

Query: 60  GYTHKGMSNEACKMFKEM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
            Y H     +A ++++ M +RA    ++    S+L AC      G   G  +H  ++   
Sbjct: 324 AYVHNDRGKDAIQLYQRMQLRA----DKVTYVSLLSACSSAEDVG--LGRVLHKQIVNDE 377

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              + +V N L++MY  C   T+ AR +F+++E R +ISW +IIS Y +R        LF
Sbjct: 378 LEKNVIVGNALVSMYAKCGSHTE-ARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLF 436

Query: 179 SRM---QREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYV 233
            +M   ++ G    +KP+   F +++ A    S++  G  + +Q        GL SD  V
Sbjct: 437 QQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQ----AASCGLSSDKAV 492

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
           G+A+V+ + + G     R+IF+ +  +  V +
Sbjct: 493 GTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQL 524



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 156/340 (45%), Gaps = 47/340 (13%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           ++ H QI+      +V + N L+++Y + G    A  +FD+M  R+ +SW  I+S Y  +
Sbjct: 367 RVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRR 426

Query: 65  GMSNEACKMFKEMVR-------AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
            +  EAC +F++M+             +  A  ++L AC +   S  + G  V       
Sbjct: 427 RLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADV--SALEQGKMVSEQAASC 484

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR-DLISWNSIISVYSQRGDTISVFK 176
             + D  V   ++ +YG C E  +  RRIF+ + +R D+  WN++I+VY+Q G +    K
Sbjct: 485 GLSSDKAVGTAVVNLYGKCGEIEE-GRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALK 543

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITA-----------AYSSVLSGSYLLQQILAMVKKA 225
           LF RM+ EG R    P+ ++F S++ A           +Y + ++  Y  + +   ++  
Sbjct: 544 LFWRMEMEGVR----PDSFSFVSILLACSHTGLEDQGKSYFTSMTTEY--RNVTRTIQHF 597

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRR------KGKEV 278
           G ++DL           R G    A +  E++ ++ + V+   L+   R      + KEV
Sbjct: 598 GCVADL---------LGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEV 648

Query: 279 HGYLIRSGLFDMVAVGN-GLVNMYAKCGTIDDSRSVFRFM 317
              L+R  L    A G   L N+YA+         V +FM
Sbjct: 649 ANKLLR--LEPRCATGYVALSNIYAELQKWHAVAKVRKFM 686


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 263/775 (33%), Positives = 435/775 (56%), Gaps = 75/775 (9%)

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSDL------YVGSALVSGFARLGNFYYARKIF 254
           +++ Y+++LS +   +  +A      +L  L      Y+ + L++ + + G    AR++F
Sbjct: 5   LSSQYAALLSAAARTEPHVAGALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARARRVF 64

Query: 255 EQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
           + M   N+ + N L+                             +  A    + D  ++F
Sbjct: 65  DAMPHPNLFTYNALL-----------------------------STLAHARLLSDMEALF 95

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR--DGLMSSNFSLISTLSSCASLGW 372
             M  +D VS+N +I+G    G + +A+  + A+ +    +  S  ++ + + + ++LG 
Sbjct: 96  ASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGD 155

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY------------------------- 407
             LG+Q H + L+LG  ++  V + L+ +YA                             
Sbjct: 156 RALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITG 215

Query: 408 LSRC------LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           L RC       ++F +M + D ++W +++  F  +  L SEA++ +  MR  G + +  T
Sbjct: 216 LLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQN-GLESEALEIFRRMRFQGIAIDQYT 274

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           F +IL A  + S  + G Q+HA +I+    +   + +AL+  Y KC  +   E +F RM+
Sbjct: 275 FGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMT 334

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
             ++ +SW ++I GY  N    +A+ +   M + G   D +T  +V+S+CA++A+LE G 
Sbjct: 335 -CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGA 393

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           + H   + + L   + + +ALV +Y KCG I+ A R FD M   +  SW +++SGYA+ G
Sbjct: 394 QFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFG 453

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
              + + LF +M   G  PD VTF+GVLSACS AG V++G  +F SM + +G++P  + +
Sbjct: 454 RAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHY 513

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFE 760
           +CM+DL  R+G+L + EEFI +MP+ P+++ W T+L AC  R +    E+G+ AA  L E
Sbjct: 514 TCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGD---MEIGKWAAENLLE 570

Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           ++PQN  +YVLL +M+A+ G+W +VA+ R+ M++ +VKKE GCSW+  K+ VH+F A D+
Sbjct: 571 IDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQ 630

Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTR 879
           SHP    IYEKL+ LN KM + GY P     L D+    K  +VS+HSEK+A+AF ++  
Sbjct: 631 SHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFV 690

Query: 880 NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             ++PIRI+KNLRVC DCH+A KFISKI GR+I++RD+ RFH F+DG CSCGD+W
Sbjct: 691 PQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 263/520 (50%), Gaps = 45/520 (8%)

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF- 178
           T++ L+S +  A   S +E+      +F  +  RD++S+N++I+ +S  G      +++ 
Sbjct: 74  TYNALLSTLAHARLLSDMEA------LFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYL 127

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           + +Q +    S++P+  T  +++ AA  S L    L +Q    + + G  ++ +VGS LV
Sbjct: 128 ALLQADS---SVRPSRITMSTMVMAA--SALGDRALGKQFHCQILRLGFGANAFVGSPLV 182

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLV 298
             +A++     A++ F+++  KNVV  N ++ G          L+R              
Sbjct: 183 DMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITG----------LLR-------------- 218

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
                C  ++++R +F  M  +DS++W TM++G  QNG   EA+  F  MR  G+    +
Sbjct: 219 -----CKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQY 273

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           +  S L++C +L  +  G+QIH   ++   D +V V +AL+ +Y+    +     VF  M
Sbjct: 274 TFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRM 333

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
              + +SW ++I  +  +     EAV+ + +M+R G  P+  T  +++++ ++ +  + G
Sbjct: 334 TCKNIISWTALIVGYGQN-GCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEG 392

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
            Q H   +   + +  T+ NAL++ YGKCG ++D  ++F  MS   D+VSW +++SGY  
Sbjct: 393 AQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMS-FHDQVSWTALVSGYAQ 451

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-VHACGVRACLEFDVV 597
                + ++L   M+ +G + D  TF  VLSAC+    +E+G    H+      +     
Sbjct: 452 FGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDD 511

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISG 636
             + ++D+YS+ G++  A  F   MP+  +   W +++S 
Sbjct: 512 HYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSA 551



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/491 (23%), Positives = 211/491 (42%), Gaps = 87/491 (17%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           ++F  N L++       L+    LF  M  R+ VS+  +++G++  G   +A +++  ++
Sbjct: 71  NLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALL 130

Query: 79  RA--GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS- 135
           +A      +R  + +++ A    G      G Q HC +L+     +  V + L+ MY   
Sbjct: 131 QADSSVRPSRITMSTMVMAASALGDRAL--GKQFHCQILRLGFGANAFVGSPLVDMYAKM 188

Query: 136 --------CLESTDC---------------------ARRIFEEIETRDLISWNSIISVYS 166
                     +  D                      ARR+FE +  RD I+W ++++ ++
Sbjct: 189 SLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFT 248

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKK 224
           Q G      ++F RM+ +G    +  ++YTFGS++TA  A S++  G    +QI A + +
Sbjct: 249 QNGLESEALEIFRRMRFQG----IAIDQYTFGSILTACGALSALEQG----KQIHAYIIR 300

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------ 272
                +++VGSALV  +++  +   A  +F +M  KN++S   L+ G             
Sbjct: 301 TRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRV 360

Query: 273 -----------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
                                         +G + H   + SGL   + V N LV +Y K
Sbjct: 361 FSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGK 420

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           CG+I+D+  +F  M   D VSW  ++SG  Q G  +E I  F  M   G+     + I  
Sbjct: 421 CGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGV 480

Query: 364 LSSCASLGWIMLGQQ-IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH- 421
           LS+C+  G++  G+   H      G+         ++ LY+ +G L    +    MP H 
Sbjct: 481 LSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHP 540

Query: 422 DQVSWNSVIGA 432
           D + W +++ A
Sbjct: 541 DAIGWGTLLSA 551



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 130/260 (50%), Gaps = 16/260 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  I++  +  +VF+ + L+++Y +   +  A  +F  M  +N +SW  ++ GY
Sbjct: 289 EQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGY 348

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G S EA ++F EM R G   + Y LGSV+ +C     +  + G Q HCL L S    
Sbjct: 349 GQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANL--ASLEEGAQFHCLALVSGLMH 406

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              VSN L+ +YG C  S + A R+F+E+   D +SW +++S Y+Q G       LF +M
Sbjct: 407 YITVSNALVTLYGKC-GSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKM 465

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGL--LSDLYVGSAL 237
             +G    +KP+  TF  +++A   +  V  G        +M K  G+  + D Y  + +
Sbjct: 466 LAKG----VKPDGVTFIGVLSACSRAGFVEKGRSYFH---SMQKDHGIVPIDDHY--TCM 516

Query: 238 VSGFARLGNFYYARKIFEQM 257
           +  ++R G    A +  +QM
Sbjct: 517 IDLYSRSGKLKEAEEFIKQM 536



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 11/169 (6%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           FH   L  G  + + + N L+ +Y + G +  A +LFDEM   + VSW  +VSGY   G 
Sbjct: 395 FHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGR 454

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQ-----ECGPSGFKFGMQVHCLVLKSNQTF 121
           + E   +F++M+  G   +      VL AC      E G S F    + H +V   +   
Sbjct: 455 AKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHY- 513

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD 170
                  +I +Y    +  +    I +     D I W +++S    RGD
Sbjct: 514 -----TCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGD 557


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 265/715 (37%), Positives = 395/715 (55%), Gaps = 49/715 (6%)

Query: 267 GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
           G +   R G+  H   + +G    V VGN LV MY++C ++ D+R VF  M   D VSWN
Sbjct: 138 GEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWN 197

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRD-GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           ++I    + G  + A+  F  M  + G    N +L++ L  CASLG   LG+Q+H   + 
Sbjct: 198 SIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVT 257

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV------IGAFADSEAL 439
             +  ++ V N L+ +YA  G +     VF  M   D VSWN++      IG F D+  L
Sbjct: 258 SEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRL 317

Query: 440 VSEAVKYYLDMRRAGWS----------------------------PNGVTFINILAAASS 471
             +  +  + M    WS                            PN VT I++L+  +S
Sbjct: 318 FEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCAS 377

Query: 472 FSMGKLGHQVHAQVIKYNV-------ANETTIENALLSCYGKCGEMDDCEKIFARMSER- 523
                 G ++H   IKY +        +E  + N L+  Y KC ++D    +F  +S + 
Sbjct: 378 VGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE 437

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG--QRLDHFTFATVLSACASVATLERGM 581
           RD V+W  MI GY  +    KA+ L+  M +     R + FT +  L ACAS+A L  G 
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGK 497

Query: 582 EVHACGVRACLE-FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
           ++HA  +R       + + + L+DMY+KCG I  A   FD M  +N  +W S+++GY  H
Sbjct: 498 QIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMH 557

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
           G+G++AL +F +M+  G   D VT + VL ACSH+G++D+G ++F  M  V+G+ P  E 
Sbjct: 558 GYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEH 617

Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
           ++C+VDLLGRAG L+     I +MP+ P  ++W   L +CCR +  K ELG  AA  + E
Sbjct: 618 YACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFL-SCCRIH-GKVELGEYAAEKITE 675

Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           +   +  +Y LL+N+YA+ G+W+DV + R  M+   VKK  GCSWV    G   F  GD+
Sbjct: 676 LASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDK 735

Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTR 879
           +HP    IY+ L +  Q+++D GYVP+T FAL D++ E K+DL+  HSEK+A+A+ +LT 
Sbjct: 736 THPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTT 795

Query: 880 NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
                IRI KNLRVCGDCH+AF ++S+I+  +I+LRDS+RFHHF +G CSC  YW
Sbjct: 796 PQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850



 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 187/665 (28%), Positives = 303/665 (45%), Gaps = 76/665 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVSGYT 62
           KL H ++L  G    + L + LI+ Y+ VG L+ A  L    P  D     W  ++  Y 
Sbjct: 45  KLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYG 103

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G +N+   +F  M    +  + Y    V +AC E   S  + G   H L L +    +
Sbjct: 104 DNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEI--SSVRCGESAHALSLVTGFISN 161

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V N L+AMY  C   +D AR++F+E+   D++SWNSII  Y++ G      ++FSRM 
Sbjct: 162 VFVGNALVAMYSRCRSLSD-ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT 220

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            E   +  +P+  T  +++    S  L    L +Q+      + ++ +++VG+ LV  +A
Sbjct: 221 NE---FGCRPDNITLVNVLPPCAS--LGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
           + G    A  +F  M  K+VVS N ++ G                             Y+
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAG-----------------------------YS 306

Query: 303 KCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
           + G  +D+  +F  M    I  D V+W+  ISG  Q G   EA+     M   G+  +  
Sbjct: 307 QIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEV 366

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLD-------SDVSVSNALLSLYADAGYLSRC 411
           +LIS LS CAS+G +M G++IH   +K  +D        +  V N L+ +YA    +   
Sbjct: 367 TLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTA 426

Query: 412 LKVF-FLMP-EHDQVSWNSVIGAFAD------SEALVSEAVKYYLDMRRAGWSPNGVTFI 463
             +F  L P E D V+W  +IG ++       +  L+SE  +     R     PN  T  
Sbjct: 427 RAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTR-----PNAFTIS 481

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETT--IENALLSCYGKCGEMDDCEKIFARMS 521
             L A +S +  ++G Q+HA  ++ N  N     + N L+  Y KCG + D   +F  M 
Sbjct: 482 CALVACASLAALRIGKQIHAYALR-NQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMM 540

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
             ++EV+W S+++GY  +    +A+ +   M + G +LD  T   VL AC+    +++GM
Sbjct: 541 A-KNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGM 599

Query: 582 EVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISG 636
           E      R    F V  G    + LVD+  + GR++ A R  + MP+      W + +S 
Sbjct: 600 EYFN---RMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSC 656

Query: 637 YARHG 641
              HG
Sbjct: 657 CRIHG 661



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 160/317 (50%), Gaps = 9/317 (2%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           +  C ++  + L   IH + L  G+ + +++++ L+S Y   G LS  + +    P  D 
Sbjct: 35  IHKCKTISQVKL---IHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDA 90

Query: 424 --VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
               WNS+I ++ D+    ++ +  +  M    W+P+  TF  +  A    S  + G   
Sbjct: 91  GVYHWNSLIRSYGDN-GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESA 149

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           HA  +     +   + NAL++ Y +C  + D  K+F  MS   D VSWNS+I  Y     
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVW-DVVSWNSIIESYAKLGK 208

Query: 542 LPKAMNLVWFMMQR-GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
              A+ +   M    G R D+ T   VL  CAS+ T   G ++H   V + +  ++ +G+
Sbjct: 209 PKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 268

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
            LVDMY+KCG +D A+  F  M V++V SWN+M++GY++ G  + A+ LF +M+ +    
Sbjct: 269 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 328

Query: 661 DHVTFVGVLSACSHAGL 677
           D VT+   +S  +  GL
Sbjct: 329 DVVTWSAAISGYAQRGL 345



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 197/460 (42%), Gaps = 75/460 (16%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF---- 74
           ++F+ N L+++Y + G +  A+ +F  M  ++ VSW  +V+GY+  G   +A ++F    
Sbjct: 263 NMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQ 322

Query: 75  -------------------------------KEMVRAGFLLNRYALGSVLRACQECGPSG 103
                                          ++M+ +G   N   L SVL  C   G   
Sbjct: 323 EEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVG--A 380

Query: 104 FKFGMQVHCLVL-------KSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI--ETRD 154
              G ++HC  +       K+    + +V N LI MY  C +  D AR +F+ +  + RD
Sbjct: 381 LMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC-KKVDTARAMFDSLSPKERD 439

Query: 155 LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL 214
           +++W  +I  YSQ GD     +L S M  E  +   +PN +T    + A  S  L+   +
Sbjct: 440 VVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ--TRPNAFTISCALVACAS--LAALRI 495

Query: 215 LQQILA-MVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR 273
            +QI A  ++       L+V + L+  +A+ G+   AR +F+ M+ KN V+   LM G  
Sbjct: 496 GKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGY- 554

Query: 274 KGKEVHGYLIRS-GLFD-MVAVG------NGLVNMYA--KCGTIDDSRSVFR-----FMI 318
               +HGY   + G+FD M  +G        LV +YA    G ID     F      F +
Sbjct: 555 ---GMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGV 611

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
                 +  ++  L + G    A+     M  +         ++ LS C   G + LG+ 
Sbjct: 612 SPGPEHYACLVDLLGRAGRLNAALRLIEEMPME---PPPVVWVAFLSCCRIHGKVELGEY 668

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
              +  +L  + D S +  L +LYA+AG      ++  LM
Sbjct: 669 AAEKITELASNHDGSYT-LLSNLYANAGRWKDVTRIRSLM 707



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 156/370 (42%), Gaps = 55/370 (14%)

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV-SWNSMISGYIHN 539
           +H +++ + +     + + L+S Y   G +     +  R       V  WNS+I  Y  N
Sbjct: 47  IHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDN 105

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
               K + L   M       D++TF  V  AC  ++++  G   HA  +      +V +G
Sbjct: 106 GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVG 165

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD-GP 658
           +ALV MYS+C  +  A + FD M V +V SWNS+I  YA+ G    AL +FS+M  + G 
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
            PD++T V VL  C+  G    G K     +    +I  +   +C+VD+  + G +D+  
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLG-KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDE-- 282

Query: 719 EFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF-EMEPQNAVNYVLLANMYA 777
                                               AN +F  M  ++ V++  +   Y+
Sbjct: 283 ------------------------------------ANTVFSNMSVKDVVSWNAMVAGYS 306

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
             G++ED  +  + M+E ++K +           V  + A    + ++ L YE L    Q
Sbjct: 307 QIGRFEDAVRLFEKMQEEKIKMD-----------VVTWSAAISGYAQRGLGYEALGVCRQ 355

Query: 838 KMRDAGYVPQ 847
            M  +G  P 
Sbjct: 356 -MLSSGIKPN 364


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  474 bits (1220), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 257/706 (36%), Positives = 395/706 (55%), Gaps = 47/706 (6%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R G +VH  L+ +G+     +G+ L+ +Y + G ++D+R +F  M  ++  SW  ++   
Sbjct: 27  RLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMY 86

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
              G YEE I  F  M  +G+   +F       +C+ L    +G+ ++   L +G + + 
Sbjct: 87  CGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNS 146

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V  ++L ++   G +    + F  +   D   WN ++  +  S+    +A+  +  M  
Sbjct: 147 CVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYT-SKGEFKKALNVFRKMVL 205

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY-NVANETTIENALLSCYGKC---- 507
            G  PN +T  + ++A ++ S+ + G ++H   IK   + ++  + N+L+  Y KC    
Sbjct: 206 EGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVE 265

Query: 508 -----------------------------GEMDDCEKIFARMS---------ERRDEVSW 529
                                        G+     + F RM            RD V W
Sbjct: 266 VARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVW 325

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
           NS+IS    +     A++L+  M      ++  T  + L AC+ +A L +G E+H   +R
Sbjct: 326 NSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIR 385

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
             L+    I ++L+DMY +CG I  + R FDLMP R++ SWN MIS Y  HG G  A+ L
Sbjct: 386 CGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNL 445

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           F Q +  G  P+H+TF  +LSACSH+GL++EG+K+FK M   Y + P +EQ++CMVDLL 
Sbjct: 446 FQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLS 505

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
           RAG+ ++  EFI KMP  PN+ +W ++LGA CR +C   +L   AA  LFE+EPQ++ NY
Sbjct: 506 RAGQFNETLEFIEKMPFEPNAAVWGSLLGA-CRIHC-NPDLAEYAARYLFELEPQSSGNY 563

Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIY 829
           VL+AN+Y++ G+WED AK R  MKE  V K  GCSW+ +K  +H FV GD SHP  + I 
Sbjct: 564 VLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQIS 623

Query: 830 EKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIM 888
            K++ L   +++ GYVP T F L D++ + KE  +  HSEKIA+AF +++  +  P+RI+
Sbjct: 624 AKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRII 683

Query: 889 KNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           KNLRVCGDCHSA KFISK+  R+I++RD+ RFHHF DG CSCGDYW
Sbjct: 684 KNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 145/554 (26%), Positives = 234/554 (42%), Gaps = 105/554 (18%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q++ +G     FL + L+ VY + G +  A ++FD+M +RN  SW  I+  Y   G  
Sbjct: 33  HAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDY 92

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            E  K+F  MV  G   + +    V +AC E     ++ G  V+  +L      +  V  
Sbjct: 93  EETIKLFYLMVNEGVRPDHFVFPKVFKACSEL--KNYRVGKDVYDYMLSIGFEGNSCVKG 150

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            ++ M+  C    D ARR FEEIE +D+  WN ++S Y+ +G+      +F +M  EG  
Sbjct: 151 SILDMFIKC-GRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEG-- 207

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAM----VKKAGLLSDLYVGSAL------ 237
             +KPN     S+  A+  S  +   LL+    +    +K   L SDL VG++L      
Sbjct: 208 --VKPN-----SITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAK 260

Query: 238 ---------------------------VSGFARLGN----------FYYARKIFEQMIQK 260
                                      V+GF + G+           + A  +F ++  +
Sbjct: 261 CRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTR 320

Query: 261 NVVSMNGLME-----GR------------------------------------RKGKEVH 279
           +VV  N ++      GR                                    R+GKE+H
Sbjct: 321 DVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIH 380

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
            ++IR GL     + N L++MY +CG+I  SR +F  M  +D VSWN MIS    +G   
Sbjct: 381 QFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGM 440

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNAL 398
           +A+  F   R  GL  ++ +  + LS+C+  G I  G +       +  +D  V     +
Sbjct: 441 DAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACM 500

Query: 399 LSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA--FADSEALVSEAVKYYLDMRRAGW 455
           + L + AG  +  L+    MP E +   W S++GA     +  L   A +Y  ++     
Sbjct: 501 VDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQS- 559

Query: 456 SPNGVTFINILAAA 469
           S N V   NI +AA
Sbjct: 560 SGNYVLMANIYSAA 573



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 130/531 (24%), Positives = 234/531 (44%), Gaps = 98/531 (18%)

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY--GSCLESTDCARRIF 147
            S+L+ C++      + G QVH  ++ +       + + L+ +Y    C+E    ARR+F
Sbjct: 14  ASILQKCRKL--YNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVED---ARRMF 68

Query: 148 EEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA---- 203
           +++  R++ SW +I+ +Y   GD     KLF  M  EG R    P+ + F  +  A    
Sbjct: 69  DKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVR----PDHFVFPKVFKACSEL 124

Query: 204 --------AYSSVLS-----GSYLLQQILAMVKKAGLLS------------DLYVGSALV 238
                    Y  +LS      S +   IL M  K G +             D+++ + +V
Sbjct: 125 KNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMV 184

Query: 239 SGFARLGNFYYARKIFEQMIQKNV----------VSMNGLMEGRRKGKEVHGYLIRSGLF 288
           SG+   G F  A  +F +M+ + V          VS    +   R G+E+HGY I+    
Sbjct: 185 SGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEEL 244

Query: 289 DM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM--ISGLDQNG--------- 336
           D  + VGN LV+ YAKC +++ +R  F  +   D VSWN M  ++G  Q G         
Sbjct: 245 DSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFF 304

Query: 337 --------CYEE----------AIMNFCA--------------MRRDGLMSSNFSLISTL 364
                    + E          +I++ CA              M    +  +  +++S L
Sbjct: 305 QRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSAL 364

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +C+ L  +  G++IH   ++ GLD+   + N+L+ +Y   G + +  ++F LMP+ D V
Sbjct: 365 PACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLV 424

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           SWN +I  +        +AV  +   R  G  PN +TF N+L+A S   + + G + + +
Sbjct: 425 SWNVMISVYG-MHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWK-YFK 482

Query: 485 VIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           ++K   A +  +E    ++    + G+ ++  +   +M    +   W S++
Sbjct: 483 MMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLL 533



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 164/327 (50%), Gaps = 17/327 (5%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S L  C  L  + LG Q+H + +  G+D    + + LL +Y   G +    ++F  M E 
Sbjct: 15  SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER 74

Query: 422 DQVSWNSVIGAF---ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
           +  SW +++  +    D E    E +K +  M   G  P+   F  +  A S     ++G
Sbjct: 75  NVFSWTAIMEMYCGLGDYE----ETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 130

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
             V+  ++       + ++ ++L  + KCG MD   + F  + E +D   WN M+SGY  
Sbjct: 131 KDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI-EFKDVFMWNIMVSGYTS 189

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA-CLEFDVV 597
                KA+N+   M+  G + +  T A+ +SAC +++ L  G E+H   ++   L+ D++
Sbjct: 190 KGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLL 249

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM--ISGYARHGHGDKALTLFSQMKL 655
           +G++LVD Y+KC  ++ A R F ++   ++ SWN+M  ++G+ ++G G  AL  F +M +
Sbjct: 250 VGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHI 309

Query: 656 ------DGPLPDHVTFVGVLSACSHAG 676
                 +    D V +  ++SAC+ +G
Sbjct: 310 ACSVFSELSTRDVVVWNSIISACAQSG 336



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 13/167 (7%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +A++L  C  +  L  G +VHA  V   ++    +GS L+++Y + G ++ A R FD M 
Sbjct: 13  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            RNV+SW +++  Y   G  ++ + LF  M  +G  PDH  F  V  ACS         K
Sbjct: 73  ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSE-------LK 125

Query: 684 HFKSMSQVYGLIPQL--EQFSC----MVDLLGRAGELDKIEEFINKM 724
           +++    VY  +  +  E  SC    ++D+  + G +D    F  ++
Sbjct: 126 NYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI 172



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 2/107 (1%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  I++ G     F+ N+LI++Y R G +  + ++FD MP R+ VSW  ++S Y
Sbjct: 374 RQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVY 433

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKF 106
              G   +A  +F++    G   N     ++L AC   G    G+K+
Sbjct: 434 GMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKY 480


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 257/709 (36%), Positives = 395/709 (55%), Gaps = 72/709 (10%)

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLF 288
           +D ++ + L+  +A+ G    A+ +F++M++++  S N L+                   
Sbjct: 56  TDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSA----------------- 98

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
                       YAK G+I + ++ F  M  +DSVS+NT I+G   N C +E++  F  M
Sbjct: 99  ------------YAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRM 146

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           +R+G   + ++++S L++ A L  +  G+QIHG  +      +V + NAL  +YA  G +
Sbjct: 147 QREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEI 206

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
            +   +F  + + + VSWN +I  +A +     + +     MR +G  P+ VT   I+AA
Sbjct: 207 EQARWLFDCLTKKNLVSWNLMISGYAKN-GQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA 265

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
                                              Y +CG +D+  ++F+   E+ D V 
Sbjct: 266 -----------------------------------YCQCGRVDEARRVFSEFKEK-DIVC 289

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           W +M+ GY  N     A+ L   M+      D +T ++V+S+CA +A+L  G  VH   +
Sbjct: 290 WTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSI 349

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
            A L  ++++ SAL+DMYSKCG ID A   F+LMP RNV SWN+MI G A++GH   AL 
Sbjct: 350 LAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALE 409

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           LF  M      PD+VTF+G+LSAC H   +++G ++F S+S  +G+ P L+ ++CMV+LL
Sbjct: 410 LFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLL 469

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAV 767
           GR G +++    I  M   P+ LIW T+L  C  + +    E+   AA  LFE++P  AV
Sbjct: 470 GRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEV---AARHLFELDPTIAV 526

Query: 768 NYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDL 827
            Y++L+NMYAS G+W+DVA  R  MK   VKK AG SW+ + + VH F + D +HPE + 
Sbjct: 527 PYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESED 586

Query: 828 IYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR--NSKLPI 885
           IYEKL  L  K+++ G+ P T   L D+  + K   + +HSEK+A+AF L +  N   PI
Sbjct: 587 IYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPI 646

Query: 886 RIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           RI+KN+R+C DCH   KF S+I+GR+I+LRDSNRFHHF+ GKCSC D W
Sbjct: 647 RIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 195/387 (50%), Gaps = 27/387 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +DA+    ++LK     D F  N L++ Y + G + +    FD MP R+SVS+   ++G+
Sbjct: 75  RDAQNLFDKMLKR----DXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGF 130

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +      E+ ++FK M R GF    Y + S+L A  +      ++G Q+H  ++  N   
Sbjct: 131 SGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQL--LDLRYGKQIHGSIIVRNFLG 188

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  + N L  MY  C E  + AR +F+ +  ++L+SWN +IS Y++ G       L  +M
Sbjct: 189 NVFIWNALTDMYAKCGE-IEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQM 247

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           +  G      P++ T  ++I AAY          +++ +  K+     D+   +A++ G+
Sbjct: 248 RLSGHM----PDQVTMSTII-AAYCQCGRVDEA-RRVFSEFKE----KDIVCWTAMMVGY 297

Query: 242 ARLGNFYYARKIFEQMIQKN----------VVSMNGLMEGRRKGKEVHGYLIRSGLFDMV 291
           A+ G    A  +F +M+ ++          VVS    +     G+ VHG  I +GL + +
Sbjct: 298 AKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNL 357

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
            V + L++MY+KCG IDD+RSVF  M  ++ VSWN MI G  QNG  ++A+  F  M + 
Sbjct: 358 LVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQ 417

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQ 378
                N + I  LS+C    WI  GQ+
Sbjct: 418 KFKPDNVTFIGILSACLHCNWIEQGQE 444



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 137/561 (24%), Positives = 229/561 (40%), Gaps = 112/561 (19%)

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
           Q  D  + N L+ +Y    +  D A+ +F+++  RD  SWN+++S Y++ G   ++   F
Sbjct: 54  QPTDSFLHNQLLHLYAKFGKLRD-AQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATF 112

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK---AGLLSDLYVGS 235
            RM    FR S+  N    G           SG+   Q+ L + K+    G     Y   
Sbjct: 113 DRMP---FRDSVSYNTTIAG----------FSGNSCPQESLELFKRMQREGFEPTEYTIV 159

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN 295
           ++++  A+L +  Y                         GK++HG +I       V + N
Sbjct: 160 SILNASAQLLDLRY-------------------------GKQIHGSIIVRNFLGNVFIWN 194

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMS 355
            L +MYAKCG I+ +R +F  +  K+ VSWN MISG  +NG  E+ I     MR  G M 
Sbjct: 195 ALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMP 254

Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
              ++                                   + +++ Y   G +    +VF
Sbjct: 255 DQVTM-----------------------------------STIIAAYCQCGRVDEARRVF 279

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
               E D V W +++  +A +     +A+  + +M      P+  T  +++++ +  +  
Sbjct: 280 SEFKEKDIVCWTAMMVGYAKN-GREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASL 338

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             G  VH + I   + N   + +AL+  Y KCG +DD   +F  M   R+ VSWN+MI G
Sbjct: 339 HHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPT-RNVVSWNAMIVG 397

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
              N     A+ L   M+Q+  + D+ TF  +LSAC     +E+G E             
Sbjct: 398 CAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEY------------ 445

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
                            D  S    + P  + Y+   M++   R G  ++A+ L   M  
Sbjct: 446 ----------------FDSISNQHGMTPTLDHYA--CMVNLLGRTGRIEQAVALIKNMAH 487

Query: 656 DGPLPDHVTFVGVLSACSHAG 676
           D   PD + +  +LS CS  G
Sbjct: 488 D---PDFLIWSTLLSICSTKG 505



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/171 (21%), Positives = 73/171 (42%), Gaps = 25/171 (14%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G   ++ + + LI++Y + G +  A  +F+ MP RN VSW  ++ G    G   +A ++F
Sbjct: 352 GLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELF 411

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN------- 127
           + M++  F  +      +L AC             +HC  ++  Q +   +SN       
Sbjct: 412 ENMLQQKFKPDNVTFIGILSAC-------------LHCNWIEQGQEYFDSISNQHGMTPT 458

Query: 128 -----VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTIS 173
                 ++ + G           I       D + W++++S+ S +GD ++
Sbjct: 459 LDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVN 509


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 282/765 (36%), Positives = 425/765 (55%), Gaps = 53/765 (6%)

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR 273
           ++  I A + K G   D    +  V  F + G    AR++FE+M  KN VS N ++ G  
Sbjct: 30  VVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYV 89

Query: 274 K-GKEVHGYLIRSGLFDMVAVG-NGLVNMYAKCGTIDDSRSVFRFM----IGKDSVSWNT 327
           K G       +  G+ +  AV    L+  Y++     ++  +F  M       D V++ T
Sbjct: 90  KSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVT 149

Query: 328 MISGLDQNGC---------------YEEAIM-------NFCAMRRDGLMSSNFSLISTLS 365
           ++SG + +                 Y+  ++       ++C   R  L    F  +  + 
Sbjct: 150 LLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEID 209

Query: 366 S-------CASLGW--IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
           S       CA++G   I+LGQQIH   +K     +V VSNALL  Y+    +    K+F 
Sbjct: 210 SFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFD 269

Query: 417 LMPEHDQVSWNSVIGAFA-DSEALVSEAVKYYLDMRR----AGWSPNGVTFINILAAASS 471
            MPE D VS+N +I  +A D +       KY  D+ R      +      F  +L+ AS+
Sbjct: 270 EMPEQDGVSYNVIISGYAWDGKH------KYAFDLFRELQFTAFDRKQFPFATMLSIASN 323

Query: 472 FSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
               ++G Q+HAQ I     +E  + N+L+  Y KCG+ ++ E IF  ++  R  V W +
Sbjct: 324 TLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLT-HRSAVPWTA 382

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC 591
           MIS Y+      + + L   M Q     D  TFA++L A AS+A+L  G ++H+  +++ 
Sbjct: 383 MISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSG 442

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
              +V  GSAL+D+Y+KCG I  A + F  MP RN+ SWN+MIS YA++G  +  L  F 
Sbjct: 443 FMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFK 502

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRA 711
           +M L G  PD V+F+GVLSACSH+GLV+EG  HF SM+Q+Y L P+ E ++ +VD+L R+
Sbjct: 503 EMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRS 562

Query: 712 GELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP-QNAVNYV 770
           G  ++ E+ + +MPI P+ ++W +VL A CR + +  EL R+AA+ LF ME  ++A  YV
Sbjct: 563 GRFNEAEKLMAEMPIDPDEIMWSSVLNA-CRIH-KNQELARRAADQLFNMEELRDAAPYV 620

Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
            ++N+YA+ G+WE+V+K  KAM++  VKK    SWV +K   H+F A D  HP+ + I +
Sbjct: 621 NMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRK 680

Query: 831 KLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMK 889
           K+  L + M + GY P T  AL + + + K + + YHSE++A+AF L    +  PI +MK
Sbjct: 681 KIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMK 740

Query: 890 NLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           NLR C DCH+A K ISKIVGREI +RDS RFHHF DG CSCGD+W
Sbjct: 741 NLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 153/593 (25%), Positives = 278/593 (46%), Gaps = 69/593 (11%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           +I+K GF  D    N  +  +++ G+L+ A +LF++MP +N+VS   ++SGY   G   E
Sbjct: 37  RIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGE 96

Query: 70  ACKMFKEMVRAGFLLNRYALG--SVLRACQECGPSGFKFGMQVH-CLVLKSNQTFDGLVS 126
           A K+F  MV    +     +G  S L   +E     F+  +Q+  C       TF  L+S
Sbjct: 97  ARKLFDGMVERTAVTWTILIGGYSQLNQFKE----AFELFVQMQRCGTEPDYVTFVTLLS 152

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
                  G+ +  T    +I +      LI  N+++  Y +        +LF  M     
Sbjct: 153 GCNGHEMGNQI--TQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMP---- 206

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
               + + +TF +++ A     L    L QQI + V K   + +++V +AL+  +++  +
Sbjct: 207 ----EIDSFTFAAVLCANIG--LDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDS 260

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG-----------------------RRK--------- 274
              ARK+F++M +++ VS N ++ G                       R++         
Sbjct: 261 VIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSI 320

Query: 275 ---------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    G+++H   I +     + VGN LV+MYAKCG  +++  +F  +  + +V W
Sbjct: 321 ASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPW 380

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
             MIS   Q G YEE +  F  MR+  +++   +  S L + AS+  + LG+Q+H   +K
Sbjct: 381 TAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIK 440

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G  S+V   +ALL +YA  G +   ++ F  MP+ + VSWN++I A+A +       +K
Sbjct: 441 SGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQN-GEAEATLK 499

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLG---HQVHAQVIKYNVANETTIENALLS 502
            + +M  +G  P+ V+F+ +L+A S   + + G        Q+ K +   E       + 
Sbjct: 500 SFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDML 559

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISG---YIHNELLPKAMNLVWFM 552
           C  + G  ++ EK+ A M    DE+ W+S+++    + + EL  +A + ++ M
Sbjct: 560 C--RSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNM 610



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 126/545 (23%), Positives = 243/545 (44%), Gaps = 84/545 (15%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K  F ++VF+ N L++ Y +   +  A KLFDEMP+++ VS+  I+SGY   G  
Sbjct: 233 HSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKH 292

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
             A  +F+E+    F   ++   ++L          ++ G Q+H   + +    + LV N
Sbjct: 293 KYAFDLFRELQFTAFDRKQFPFATMLSIASNT--LDWEMGRQIHAQTIVTTADSEILVGN 350

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY  C +  + A  IF  +  R  + W ++IS Y Q+G      +LF++M++    
Sbjct: 351 SLVDMYAKCGKFEE-AEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQA--- 406

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
            S+  ++ TF SL+ A+ S  ++   L +Q+ + + K+G +S+++ GSAL+  +A+ G+ 
Sbjct: 407 -SVIADQATFASLLRASAS--IASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSI 463

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
             A + F++M  +N+VS                              N +++ YA+ G  
Sbjct: 464 KDAVQTFQEMPDRNIVSW-----------------------------NAMISAYAQNGEA 494

Query: 308 DDSRSVFRFMI----GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           + +   F+ M+      DSVS+  ++S    +G  EE + +F +M               
Sbjct: 495 EATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSM--------------- 539

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHD 422
                         QI+       LD       +++ +   +G  +   K+   MP + D
Sbjct: 540 -------------TQIY------KLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPD 580

Query: 423 QVSWNSVIGA--FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF-SMGKLGH 479
           ++ W+SV+ A     ++ L   A     +M     +   V   NI AAA  + ++ K+  
Sbjct: 581 EIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHK 640

Query: 480 QVHAQVIKYNVAN---ETTIENALLSCYGKC-GEMDDCEKIFARMSERRDEVSWNSMISG 535
            +  + +K   A    E   E  + S   +C  ++++  K    +++  +E+ +    S 
Sbjct: 641 AMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSC 700

Query: 536 YIHNE 540
            +HNE
Sbjct: 701 ALHNE 705



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 52/96 (54%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  I+K GF  +VF  + L++VY + G +  A + F EMPDRN VSW  ++S Y   
Sbjct: 432 KQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQN 491

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G +    K FKEMV +G   +  +   VL AC   G
Sbjct: 492 GEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSG 527


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 255/692 (36%), Positives = 378/692 (54%), Gaps = 36/692 (5%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAK--CGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           K++H   I +GL     V   ++    K   G ++ +R VF  M G +   WN MI G  
Sbjct: 36  KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYS 95

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           + GC   A+  +C M   G+M   ++    L        +  G+++H   +KLG  S+V 
Sbjct: 96  RVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVF 155

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V NAL+ LY+ +G +S    VF    + D V+WN +I  +  S+    E++K + +M R 
Sbjct: 156 VQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQF-DESMKLFDEMERM 214

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
              P+ +T +++L+A S      +G +VH  V    +     +ENAL+  Y  CG+MD  
Sbjct: 215 RVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTA 274

Query: 514 EKIFARMSER------------------------------RDEVSWNSMISGYIHNELLP 543
             IF  M  R                              RD VSW +MI GY+      
Sbjct: 275 LGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFK 334

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           + ++L   M     + D FT  ++L+ACA +  LE G  + A   +  ++ D  +G+AL+
Sbjct: 335 EVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALI 394

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           DMY  CG ++ A R F+ MP R+  SW ++I G A +G+G++AL +FSQM      PD V
Sbjct: 395 DMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEV 454

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           T +GVL AC+H+G+VD+G K F  M+  +G+ P +  + CMVDLLGRAG L +  E I  
Sbjct: 455 TCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKN 514

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           MP+ PNS++W ++LGA CR + R  E+   AA  + E+EP+N   YVLL N+YA+  +WE
Sbjct: 515 MPVKPNSIVWGSLLGA-CRVH-RDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWE 572

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
            + + RK M +  +KK  GCS + M   VH FVAGD+ HP+   IY KL E++  ++ AG
Sbjct: 573 KLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAG 632

Query: 844 YVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFK 902
           Y P T     D+  E KE  V  HSEK+A+AF +++    + IRI+KNLR+C DCH   K
Sbjct: 633 YSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAK 692

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            +SK+  RE+++RD  RFHHF  G CSC DYW
Sbjct: 693 LVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 232/506 (45%), Gaps = 48/506 (9%)

Query: 33  VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSV 92
           +GD+  A  +FD MP  N   W  ++ GY+  G  N A  M+ EM+  G + + Y    +
Sbjct: 66  LGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFL 125

Query: 93  LRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIET 152
           L+       +  K G ++H  ++K   + +  V N LI +Y    E    AR +F+    
Sbjct: 126 LKRFTR--DTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGE-VSVARGVFDRSSK 182

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGS 212
            D+++WN +IS Y++        KLF  M+    R  + P+  T  S+++A   S L   
Sbjct: 183 GDVVTWNVMISGYNRSKQFDESMKLFDEME----RMRVLPSSITLVSVLSAC--SKLKDL 236

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR 272
            + +++   VK   +     + +AL+  +A  G+   A  IF+ M  ++V+S   ++ G 
Sbjct: 237 NVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTG- 295

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
                                       +   G +  +R+ F  M  +D VSW  MI G 
Sbjct: 296 ----------------------------FTNLGQVGLARNYFDKMPERDFVSWTAMIDGY 327

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            Q   ++E +  F  M+   +    F+++S L++CA LG + LG+ I     K  +  D 
Sbjct: 328 LQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDS 387

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V NAL+ +Y + G + + +++F  MP  D++SW +VI   A +     EA+  +  M +
Sbjct: 388 FVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAIN-GYGEEALDMFSQMLK 446

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-----IKYNVANETTIENALLSCYGKC 507
           A  +P+ VT I +L A +   M   G +  A++     I+ NVA+   + + L    G+ 
Sbjct: 447 ASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLL----GRA 502

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMI 533
           G + +  ++   M  + + + W S++
Sbjct: 503 GHLKEAHEVIKNMPVKPNSIVWGSLL 528



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 118/501 (23%), Positives = 221/501 (44%), Gaps = 76/501 (15%)

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFAR--LGNFYYARKIFEQMIQKNVVSMNGLMEGR 272
           L+QI +     GL+S+  V + +++   +  LG+  YAR +F+ M   N    N +++G 
Sbjct: 35  LKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGY 94

Query: 273 RK-----------------------------------------GKEVHGYLIRSGLFDMV 291
            +                                         G+E+H ++++ G    V
Sbjct: 95  SRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNV 154

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
            V N L+++Y+  G +  +R VF      D V+WN MISG +++  ++E++  F  M R 
Sbjct: 155 FVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERM 214

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
            ++ S+ +L+S LS+C+ L  + +G+++H     L ++    + NAL+ +YA  G +   
Sbjct: 215 RVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTA 274

Query: 412 LKVFFLMPEHDQVSWNSVIGAFAD---------------SEALVS--------------- 441
           L +F  M   D +SW +++  F +                   VS               
Sbjct: 275 LGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFK 334

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           E +  + +M+ A   P+  T ++IL A +     +LG  + A + K  +  ++ + NAL+
Sbjct: 335 EVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALI 394

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
             Y  CG ++   +IF  M   RD++SW ++I G   N    +A+++   M++     D 
Sbjct: 395 DMYFNCGNVEKAIRIFNAMP-HRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDE 453

Query: 562 FTFATVLSACASVATLERGMEVHA-CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
            T   VL AC     +++G +  A    +  +E +V     +VD+  + G +  A     
Sbjct: 454 VTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIK 513

Query: 621 LMPVR-NVYSWNSMISGYARH 640
            MPV+ N   W S++     H
Sbjct: 514 NMPVKPNSIVWGSLLGACRVH 534



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 130/572 (22%), Positives = 238/572 (41%), Gaps = 111/572 (19%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H  I+K GF+ +VF+ N LI++Y   G+++ A  +FD     + V+W  ++SGY
Sbjct: 136 KCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGY 195

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                 +E+ K+F EM R   L +   L SVL AC +        G +VH  V       
Sbjct: 196 NRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKL--KDLNVGKRVHRYVKDLKIEP 253

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
             ++ N LI MY +C +  D A  IF+ +++RD+ISW +I++ ++  G        F +M
Sbjct: 254 VRVLENALIDMYAACGD-MDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKM 312

Query: 182 QREGF--------------RY-------------SLKPNEYTFGSLITAAYSSVLSGSYL 214
               F              R+             ++KP+E+T  S++TA   + L    L
Sbjct: 313 PERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTAC--AHLGALEL 370

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK 274
            + I A + K  +  D +VG+AL+  +   GN   A +IF  M  ++ +S   ++ G   
Sbjct: 371 GEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGL-- 428

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
              ++GY            G   ++M+++                               
Sbjct: 429 --AINGY------------GEEALDMFSQ------------------------------- 443

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE-GLKLGLDSDVS 393
                        M +  +     + I  L +C   G +  G++       + G++ +V+
Sbjct: 444 -------------MLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVA 490

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA--FADSEALVSEAVKYYLDM 450
               ++ L   AG+L    +V   MP + + + W S++GA      E +   A +  L++
Sbjct: 491 HYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILEL 550

Query: 451 RRAGWSPNGVTFI---NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
                  NG  ++   NI AA + +   KL H+V   ++   +  + T   +L+   G  
Sbjct: 551 E----PENGAVYVLLCNIYAACNRWE--KL-HEVRKLMMDRGI--KKTPGCSLIEMNGSV 601

Query: 508 GEMDDCEKIFARMSE---RRDEVSWNSMISGY 536
            E    +++  +  E   + DE+S +   +GY
Sbjct: 602 HEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGY 633



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 154/332 (46%), Gaps = 15/332 (4%)

Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLS--CYGKCGEMDDCEKIFARMSERRDEVSWN 530
           SM +L  Q+H+Q I   + +   +   +++  C  + G+M+    +F  M      V WN
Sbjct: 31  SMAQL-KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFV-WN 88

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           +MI GY        A+++   M++RG   D +T+  +L        ++ G E+H   V+ 
Sbjct: 89  NMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKL 148

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
               +V + +AL+ +YS  G +  A   FD     +V +WN MISGY R    D+++ LF
Sbjct: 149 GFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLF 208

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
            +M+    LP  +T V VLSACS    ++ G K      +   + P     + ++D+   
Sbjct: 209 DEMERMRVLPSSITLVSVLSACSKLKDLNVG-KRVHRYVKDLKIEPVRVLENALIDMYAA 267

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK--AANMLFEMEPQNAVN 768
            G++D      + M  + + + W  ++          T LG+   A N   +M  ++ V+
Sbjct: 268 CGDMDTALGIFDNMK-SRDVISWTAIVTGF-------TNLGQVGLARNYFDKMPERDFVS 319

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKE 800
           +  + + Y    ++++V    + M+ A +K +
Sbjct: 320 WTAMIDGYLQVNRFKEVLSLFREMQAANIKPD 351


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 233/574 (40%), Positives = 364/574 (63%), Gaps = 6/574 (1%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           + L  C     ++ G+ +H   L+     D+ + N LL++YA  G L    KVF  MP+ 
Sbjct: 65  TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D V+W ++I  ++  +    +A+ ++  M R G+SPN  T  +++ AA++   G  GHQ+
Sbjct: 125 DFVTWTTLISGYSQHDR-PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H   +K    +   + +ALL  Y + G MDD + +F  + E R++VSWN++I+G+     
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL-ESRNDVSWNALIAGHARRSG 242

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             KA+ L   M++ G R  HF++A++  AC+S   LE+G  VHA  +++  +     G+ 
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+DMY+K G I  A + FD +  R+V SWNS+++ YA+HG G +A+  F +M+  G  P+
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            ++F+ VL+ACSH+GL+DEG+ +++ M +  G++P+   +  +VDLLGRAG+L++   FI
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFI 421

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
            +MPI P + IW+ +L A CR + + TELG  AA  +FE++P +   +V+L N+YASGG+
Sbjct: 422 EEMPIEPTAAIWKALLNA-CRMH-KNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 479

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           W D A+ RK MKE+ VKKE  CSWV +++ +H+FVA DE HP+++ I  K +E+  K+++
Sbjct: 480 WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 539

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSA 900
            GYVP T   +  ++ + +E  + YHSEKIA+AF L        I I KN+RVCGDCH+A
Sbjct: 540 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTA 599

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            K  SK+VGREI++RD+NRFHHF DG CSC DYW
Sbjct: 600 IKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 218/433 (50%), Gaps = 15/433 (3%)

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
           G++  A + F   + K       L++GR     VH ++++S     + +GN L+NMYAKC
Sbjct: 53  GSYIPADRRFYNTLLKKCTVFKLLIQGRI----VHAHILQSIFRHDIVMGNTLLNMYAKC 108

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G+++++R VF  M  +D V+W T+ISG  Q+    +A++ F  M R G   + F+L S +
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            + A+      G Q+HG  +K G DS+V V +ALL LY   G +     VF  +   + V
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           SWN++I   A       +A++ +  M R G+ P+  ++ ++  A SS    + G  VHA 
Sbjct: 229 SWNALIAGHARRSG-TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAY 287

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
           +IK          N LL  Y K G + D  KIF R++ +RD VSWNS+++ Y  +    +
Sbjct: 288 MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKE 346

Query: 545 AMNLVWF--MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
           A  + WF  M + G R +  +F +VL+AC+    L+ G   +    +  +  +      +
Sbjct: 347 A--VWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTV 404

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYARHGH---GDKALTLFSQMKLDGP 658
           VD+  + G ++ A RF + MP+    + W ++++    H +   G  A     ++  D P
Sbjct: 405 VDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDP 464

Query: 659 LPDHVTFVGVLSA 671
            P HV    + ++
Sbjct: 465 GP-HVILYNIYAS 476



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 187/393 (47%), Gaps = 57/393 (14%)

Query: 85  NRYALGSVLRACQECGPSGFKFGMQ---VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD 141
           +R    ++L+ C     + FK  +Q   VH  +L+S    D ++ N L+ MY  C  S +
Sbjct: 59  DRRFYNTLLKKC-----TVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC-GSLE 112

Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
            AR++FE++  RD ++W ++IS YSQ          F++M R G+     PNE+T  S+I
Sbjct: 113 EARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGY----SPNEFTLSSVI 168

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
            AA +          Q+     K G  S+++VGSAL+  + R G    A+ +F+ +  +N
Sbjct: 169 KAAAAE--RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRN 226

Query: 262 VVSMNGLMEG--RRKGKE---------------------------------------VHG 280
            VS N L+ G  RR G E                                       VH 
Sbjct: 227 DVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHA 286

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
           Y+I+SG   +   GN L++MYAK G+I D+R +F  +  +D VSWN++++   Q+G  +E
Sbjct: 287 YMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKE 346

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A+  F  MRR G+  +  S +S L++C+  G +  G   +    K G+  +      ++ 
Sbjct: 347 AVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVD 406

Query: 401 LYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           L   AG L+R L+    MP E     W +++ A
Sbjct: 407 LLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 155/313 (49%), Gaps = 17/313 (5%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           +K GF  +V + + L+++Y R G +  A  +FD +  RN VSW  +++G+  +  + +A 
Sbjct: 188 VKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKAL 247

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
           ++F+ M+R GF  + ++  S+  AC   G    + G  VH  ++KS +       N L+ 
Sbjct: 248 ELFQGMLRDGFRPSHFSYASLFGACSSTG--FLEQGKWVHAYMIKSGEKLVAFAGNTLLD 305

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY       D AR+IF+ +  RD++SWNS+++ Y+Q G        F  M+R G R    
Sbjct: 306 MYAKSGSIHD-ARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR---- 360

Query: 192 PNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
           PNE +F S++TA ++S +L   +   +++   KK G++ + +    +V    R G+   A
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELM---KKDGIVPEAWHYVTVVDLLGRAGDLNRA 417

Query: 251 RKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAKC 304
            +  E+M I+        L+   R  K    G      +F++     G    L N+YA  
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477

Query: 305 GTIDDSRSVFRFM 317
           G  +D+  V + M
Sbjct: 478 GRWNDAARVRKKM 490



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 65/114 (57%)

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           D   + T+L  C     L +G  VHA  +++    D+V+G+ L++MY+KCG ++ A + F
Sbjct: 59  DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
           + MP R+  +W ++ISGY++H     AL  F+QM   G  P+  T   V+ A +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K G     F  NTL+++Y + G +  A K+FD +  R+ VSW  +++ Y
Sbjct: 279 EQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAY 338

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   EA   F+EM R G   N  +  SVL AC   G
Sbjct: 339 AQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377


>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
          Length = 617

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 254/620 (40%), Positives = 390/620 (62%), Gaps = 5/620 (0%)

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M  +++VSW T++SGL QN  + +A+  F AMRR G+  + F+L S   + A+LG  + G
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
            Q+H  G++LG D+++ V++ L  +Y+  G LS   +VF  MP+ D V+W ++I  +A +
Sbjct: 61  AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120

Query: 437 EALVSEAVKYYLDMRRAGW-SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
            +L   AV  + DM+R G    +   F ++L+A+     G L   +H  V K     E  
Sbjct: 121 GSL-EAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVA 179

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           + NAL+  Y K  +++   ++        + VS  SMI GYI  + + +A+ +   + ++
Sbjct: 180 VRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQ 239

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G   + FTF++++  CA  A LE+G ++HA  ++  L  D  +GS LVDMY KCG I  +
Sbjct: 240 GVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLS 299

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
            + F+ +  R   +WN++I+ +A+HGHG +A+  F +M   G  P+H+ FV +L+ACSHA
Sbjct: 300 MQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHA 359

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           GLVDEG K+F SM + +G+ P+ E +SC++D  GRAG LD+  +FI++MPI PN+  W +
Sbjct: 360 GLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCS 419

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           +LGA CR    K ELG  AA  L ++EP N   +V L+ +YAS G+WEDV   RK M+++
Sbjct: 420 LLGA-CRMRGSK-ELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDS 477

Query: 796 EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
            +KK  G SWV      HVF + D SHP++  IYEKL+EL  ++++ GY+P T F   +L
Sbjct: 478 RIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNL 537

Query: 856 EPESKEDLVSYHSEKIAVAFVL-TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
           E  +KE ++ YHSE+IAVAF L +  +  PI + KNLR+C DCH+AFKFI K+  R+I++
Sbjct: 538 EDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIV 597

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RD++RFHHF +G+CSCGDYW
Sbjct: 598 RDNSRFHHFVNGRCSCGDYW 617



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 98/425 (23%), Positives = 189/425 (44%), Gaps = 51/425 (12%)

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGS 212
           R+ +SW +++S  SQ          F+ M+R G    + P    F     A  ++ L   
Sbjct: 4   RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAG----VAPTR--FALSSAARAAAALGAP 57

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG- 271
               Q+  +  + G  ++L+V S L   +++ G    A ++F+QM QK+ V+   +++G 
Sbjct: 58  LPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGY 117

Query: 272 ----------------RRKG-------------------------KEVHGYLIRSGLFDM 290
                           +R+G                         K +H  + ++G    
Sbjct: 118 AKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELE 177

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGK-DSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
           VAV N L++MYAK   ++ +  V +   G  + VS  +MI G  +  C EEA++ +  +R
Sbjct: 178 VAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELR 237

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
           R G+  + F+  S +  CA    +  G Q+H + +K  L  D  V + L+ +Y   G +S
Sbjct: 238 RQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLIS 297

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
             +++F  +     ++WN+VI  FA       EA++ +  M  +G  PN + F+++L A 
Sbjct: 298 LSMQLFNEIEYRTDIAWNAVINVFA-QHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTAC 356

Query: 470 SSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
           S   +   G +  ++    + +  +    + ++  YG+ G +D+  K  + M  + +   
Sbjct: 357 SHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYG 416

Query: 529 WNSMI 533
           W S++
Sbjct: 417 WCSLL 421



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 198/439 (45%), Gaps = 68/439 (15%)

Query: 46  MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFK 105
           MP RN+VSW  +VSG +   M  +A   F  M RAG    R+AL S  RA          
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAA--LGAPL 58

Query: 106 FGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC-LESTDCARRIFEEIETRDLISWNSIISV 164
            G Q+HC+ ++     +  V++ L  MY  C L S  C  R+F+++  +D ++W ++I  
Sbjct: 59  PGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEAC--RVFDQMPQKDAVAWTAMIDG 116

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
           Y++ G   +    F  M+REG    +  +++ F S+++A  S  L   +L + I   V K
Sbjct: 117 YAKNGSLEAAVLSFRDMKREGL---VGADQHVFCSVLSA--SGGLKDGWLSKSIHCCVTK 171

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFE----------------------------- 255
           AG   ++ V +AL+  +A+  +   A ++ +                             
Sbjct: 172 AGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALV 231

Query: 256 -------QMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
                  Q ++ N  + + +++G        +G ++H  +I++ L     VG+ LV+MY 
Sbjct: 232 IYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYG 291

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIS 362
           KCG I  S  +F  +  +  ++WN +I+   Q+G   EAI  F  M   G+  ++ + +S
Sbjct: 292 KCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVS 351

Query: 363 TLSSCASLGWIMLGQQIHGEGLKL--------GLDSDVSVSNALLSLYADAGYLSRCLKV 414
            L++C+  G +        EGLK         G++      + ++  Y  AG L    K 
Sbjct: 352 LLTACSHAGLV-------DEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKF 404

Query: 415 FFLMP-EHDQVSWNSVIGA 432
              MP + +   W S++GA
Sbjct: 405 ISEMPIKPNAYGWCSLLGA 423



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 147/321 (45%), Gaps = 15/321 (4%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR-NSVSWACIVSGYT 62
           +K  H  + K GF  +V + N LI++Y +  D+ SAS++    P   N VS   ++ GY 
Sbjct: 162 SKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYI 221

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                 EA  ++ E+ R G   N +   S+++ C     +  + G Q+H  V+K++   D
Sbjct: 222 ETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAM--QALLEQGAQLHAQVIKTDLIRD 279

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V + L+ MYG C      + ++F EIE R  I+WN++I+V++Q G      + F RM 
Sbjct: 280 SFVGSTLVDMYGKC-GLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMI 338

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             G R    PN   F SL+TA   + L     L+   +M +  G+       S ++  + 
Sbjct: 339 YSGIR----PNHIAFVSLLTACSHAGLVDEG-LKYFYSMKEAHGIEPKEEHYSCIIDTYG 393

Query: 243 RLGNFYYARKIFEQM-IQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG---- 296
           R G    A K   +M I+ N      L+   R +G +  G +    L  +     G    
Sbjct: 394 RAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVS 453

Query: 297 LVNMYAKCGTIDDSRSVFRFM 317
           L  +YA  G  +D ++V + M
Sbjct: 454 LSGIYASLGQWEDVKAVRKLM 474



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 134/268 (50%), Gaps = 17/268 (6%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   ++ GF  ++F+ + L ++Y + G L+ A ++FD+MP +++V+W  ++ GY   G 
Sbjct: 63  LHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGS 122

Query: 67  SNEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFG---MQVHCLVLKSNQTFD 122
              A   F++M R G +  +++   SVL A       G K G     +HC V K+    +
Sbjct: 123 LEAAVLSFRDMKREGLVGADQHVFCSVLSA-----SGGLKDGWLSKSIHCCVTKAGFELE 177

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V N LI MY   ++    +R +  +    +++S  S+I  Y +         ++  ++
Sbjct: 178 VAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELR 237

Query: 183 REGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           R+G    ++PNE+TF S+I   A  ++L       Q+ A V K  L+ D +VGS LV  +
Sbjct: 238 RQG----VEPNEFTFSSMIKGCAMQALLEQG---AQLHAQVIKTDLIRDSFVGSTLVDMY 290

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLM 269
            + G    + ++F ++  +  ++ N ++
Sbjct: 291 GKCGLISLSMQLFNEIEYRTDIAWNAVI 318


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 252/659 (38%), Positives = 394/659 (59%), Gaps = 7/659 (1%)

Query: 278 VHGYLIRSGLF-DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           +H + ++ GL    V V N L++ Y K G +  +R VF+ M  +DSV++N M+ G  + G
Sbjct: 161 LHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEG 220

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
            + EA+  F AMRR GL ++ F+  + L+    +G + LG+Q+HG  +     S+V V+N
Sbjct: 221 SHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGL-VARATSSNVFVNN 279

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           +LL  Y+    L    K+F  M E D VS+N +I  +A +    S  ++ + +M+   + 
Sbjct: 280 SLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRC-ASIVLRLFREMQSLSFD 338

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
              + + ++L+ A S     +G Q+HAQ++   +++E  + NAL+  Y KCG +D  +  
Sbjct: 339 RQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTN 398

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F   +++   VSW +MI+G + N    +A+ L   M + G   D  TF++ + A +++A 
Sbjct: 399 FINKNDKTG-VSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAM 457

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           +  G ++H+  +R+     V  GSAL+DMY+KCG +D A + FD MP RN  SWN++IS 
Sbjct: 458 IGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISA 517

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           YA +G    A+ +F  M   G  PD VTF+ VLSACSH GL +E  K+F+ M   YG+ P
Sbjct: 518 YAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISP 577

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAAN 756
             E +SC++D LGR G  DK++E + +MP   + +IW ++L + CR +  + +L R AA 
Sbjct: 578 WKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHS-CRTHGNQ-DLARVAAE 635

Query: 757 MLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV 816
            LF M   +A  YV+L+N++A  GKWED A  +K M++  ++KE G SWV +K  V+ F 
Sbjct: 636 KLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFS 695

Query: 817 AGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFV 876
           + D+++P    I ++L+ L ++M   GY P T   L  ++ + K + + YHSE++A+AF 
Sbjct: 696 SNDQTNPMITEIKDELERLYKEMDKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIAFA 755

Query: 877 LTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           L       PIR+MKNL  C DCHSA K +SKIV R+I++RDS+RFHHF DG CSCGDYW
Sbjct: 756 LINTPPGTPIRVMKNLSACVDCHSAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCGDYW 814



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 152/573 (26%), Positives = 274/573 (47%), Gaps = 77/573 (13%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVSGYTHK--GMSNEACKMF 74
           + F  N +++ Y R G L++A  LF   P   R++V+W  ++  +       +++A  +F
Sbjct: 65  NAFSLNRMLSGYSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLF 124

Query: 75  KEMVRAGFLLNRYALGSVLRACQECG------------PSGFKFGMQVHCLVLKSNQTFD 122
           ++M+R G   +R  + +VL      G            P   K G+ +H  V+  N   D
Sbjct: 125 RDMLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGL-LHSNVVVCNTLLD 183

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
               + L+A           ARR+F+E+  RD +++N+++   S+ G       LF+ M+
Sbjct: 184 AYCKHGLLA----------AARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMR 233

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           R+G    L    +TF +++T A  + +    L +Q+  +V +A   S+++V ++L+  ++
Sbjct: 234 RKG----LAATRFTFSTVLTVA--TGVGDLCLGRQVHGLVARA-TSSNVFVNNSLLDFYS 286

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------------RRK----- 274
           +       +K+F +MI+++ VS N ++ G                       R+      
Sbjct: 287 KCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYAS 346

Query: 275 -------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                        GK++H  L+  GL     VGN L++MY+KCG +D +++ F     K 
Sbjct: 347 LLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKT 406

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            VSW  MI+G  QNG  EEA+  FC MRR GL     +  ST+ + ++L  I LG+Q+H 
Sbjct: 407 GVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHS 466

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             ++ G  S V   +ALL +Y   G L   L+ F  MPE + +SWN+VI A+A       
Sbjct: 467 YLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYA-HYGQAK 525

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-IKYNVANETTIENAL 500
            A+K +  M   G+ P+ VTF+++L+A S   + +   +    +  +Y ++      + +
Sbjct: 526 NAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCV 585

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           +   G+ G  D  +++   M    D + W+S++
Sbjct: 586 IDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSIL 618



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 190/407 (46%), Gaps = 52/407 (12%)

Query: 7   FHLQILKHGFAY-DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
            H   LK G  + +V +CNTL++ Y + G LA+A ++F EMP R+SV++  ++ G + +G
Sbjct: 161 LHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEG 220

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
              EA  +F  M R G    R+   +VL      G      G QVH LV ++  + +  V
Sbjct: 221 SHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVG--DLCLGRQVHGLVARATSS-NVFV 277

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           +N L+  Y  C +  D  +++F E+  RD +S+N +I+ Y+       V +LF  MQ   
Sbjct: 278 NNSLLDFYSKC-DCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLS 336

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
           F     P    + SL++ A S    G  + +QI A +   GL S+  VG+AL+  +++ G
Sbjct: 337 FDRQALP----YASLLSVAGSVPHIG--IGKQIHAQLVLLGLSSEDLVGNALIDMYSKCG 390

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRK-------------- 274
               A+  F     K  VS   ++ G                 RR               
Sbjct: 391 MLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIK 450

Query: 275 ----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                     G+++H YLIRSG    V  G+ L++MY KCG +D++   F  M  ++S+S
Sbjct: 451 ASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSIS 510

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           WN +IS     G  + AI  F  M   G    + + +S LS+C+  G
Sbjct: 511 WNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNG 557



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 171/358 (47%), Gaps = 19/358 (5%)

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEH--DQVSWNSVIGAFADSE-ALVSEAVKYYLDMRR 452
           N +LS Y+ +G LS    +F   P H  D V+W  +IGAFA +  A  S+AV  + DM R
Sbjct: 70  NRMLSGYSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLR 129

Query: 453 AGWSPNGV---TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE-NALLSCYGKCG 508
            G +P+ V   T +N+  A+   +   +   +H   +K  + +   +  N LL  Y K G
Sbjct: 130 EGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHG 189

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
            +    ++F  M   RD V++N+M+ G        +A++L   M ++G     FTF+TVL
Sbjct: 190 LLAAARRVFQEMPH-RDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVL 248

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
           +    V  L  G +VH    RA    +V + ++L+D YSKC  +D   + F  M  R+  
Sbjct: 249 TVATGVGDLCLGRQVHGLVARAT-SSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNV 307

Query: 629 SWNSMISGYARHGHGDKALTLFSQMK---LDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
           S+N MI+GYA +      L LF +M+    D     + + + V  +  H G+     K  
Sbjct: 308 SYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGI----GKQI 363

Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE-EFINKMPITPNSLIWRTVLGACCR 742
            +   + GL  +    + ++D+  + G LD  +  FINK   T  S  W  ++  C +
Sbjct: 364 HAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVS--WTAMITGCVQ 419



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 146/319 (45%), Gaps = 14/319 (4%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q++  G + +  + N LI++Y + G L +A   F    D+  VSW  +++G    
Sbjct: 361 KQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQN 420

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   EA ++F  M RAG   +R    S ++A       G   G Q+H  +++S       
Sbjct: 421 GQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIG--LGRQLHSYLIRSGHMSSVF 478

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
             + L+ MY  C    D A + F+E+  R+ ISWN++IS Y+  G   +  K+F  M   
Sbjct: 479 SGSALLDMYTKC-GCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCY 537

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           GF    KP+  TF S+++A   + L+    ++    M  + G+       S ++    R+
Sbjct: 538 GF----KPDSVTFLSVLSACSHNGLA-EECMKYFELMEYEYGISPWKEHYSCVIDTLGRV 592

Query: 245 GNFYYARKIFEQMIQKN--VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG----LV 298
           G F   +++  +M  ++  ++  + L   R  G +    +    LF M +        L 
Sbjct: 593 GRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILS 652

Query: 299 NMYAKCGTIDDSRSVFRFM 317
           N++AK G  +D+  V + M
Sbjct: 653 NIFAKAGKWEDAAGVKKIM 671



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 115/286 (40%), Gaps = 51/286 (17%)

Query: 483 AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
           A+++K      T   N LL      G +     +F +M  R +  S N M+SGY  +  L
Sbjct: 23  ARMVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQL 82

Query: 543 PKAMNL------------VWF-----------------------MMQRGQRLDHFTFATV 567
             A +L             W                        M++ G   D  T ATV
Sbjct: 83  SAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATV 142

Query: 568 LS---ACASVATLERGMEVHACGVR-ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           L+   A    A       +H   ++   L  +VV+ + L+D Y K G +  A R F  MP
Sbjct: 143 LNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMP 202

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            R+  ++N+M+ G ++ G   +AL LF+ M+  G      TF  VL+  +  G +  G  
Sbjct: 203 HRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLG-- 260

Query: 684 HFKSMSQVYGLIPQLEQFSCMV-----DLLGRAGELDKIEEFINKM 724
                 QV+GL+ +    +  V     D   +   LD++++  ++M
Sbjct: 261 -----RQVHGLVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEM 301


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 276/768 (35%), Positives = 405/768 (52%), Gaps = 59/768 (7%)

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--- 271
           L Q  A +   G  +D+ + + L    + LG  YYAR IF  + + +V   N LM G   
Sbjct: 36  LAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSV 95

Query: 272 ---------------------------------------RRKGKEVHGYLIRSGLFDMVA 292
                                                   R G+ +HG  +  G    + 
Sbjct: 96  NESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELL 155

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           +G+ +V MY K   ++D+R VF  M  KD++ WNTMISG  +N  Y E+I  F    RD 
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF----RDL 211

Query: 353 LMSS-----NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           +  S       +L+  L + A L  + LG QIH    K G  S   V    +SLY+  G 
Sbjct: 212 INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +     +F    + D V++N++I  +  S      ++  + ++  +G      T ++++ 
Sbjct: 272 IKMGSALFREFRKPDIVAYNAMIHGYT-SNGETELSLSLFKELMLSGARLRSSTLVSLVP 330

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
            +       L + +H   +K N  +  ++  AL + Y K  E++   K+F   S  +   
Sbjct: 331 VSGHL---MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE-SPEKSLP 386

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           SWN+MISGY  N L   A++L   M +     +  T   +LSACA +  L  G  VH   
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV 446

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
                E  + + +AL+ MY+KCG I  A R FDLM  +N  +WN+MISGY  HG G +AL
Sbjct: 447 RSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEAL 506

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDL 707
            +F +M   G  P  VTF+ VL ACSHAGLV EG + F SM   YG  P ++ ++CMVD+
Sbjct: 507 NIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDI 566

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAV 767
           LGRAG L +  +FI  M I P S +W T+LGA CR + + T L R  +  LFE++P N  
Sbjct: 567 LGRAGHLQRALQFIEAMSIEPGSSVWETLLGA-CRIH-KDTNLARTVSEKLFELDPDNVG 624

Query: 768 NYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDL 827
            +VLL+N++++   +   A  R+  K+ ++ K  G + + + +  HVF +GD+SHP+   
Sbjct: 625 YHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKE 684

Query: 828 IYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIR 886
           IYEKL++L  KMR+AGY P+T+ AL D+E E +E +V  HSE++A+AF ++       IR
Sbjct: 685 IYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIR 744

Query: 887 IMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           I+KNLRVC DCH+  K ISKI  R IV+RD+NRFHHF DG CSCGDYW
Sbjct: 745 IIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 213/477 (44%), Gaps = 60/477 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  ++ H Q +  G   ++ L + ++ +Y +   +  A K+FD MP+++++ W  ++SGY
Sbjct: 136 RAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGY 195

Query: 62  THKGMSNEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
               M  E+ ++F++++      L+   L  +L A  E      + GMQ+H L  K+   
Sbjct: 196 RKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL--QELRLGMQIHSLATKTGCY 253

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
               V    I++Y  C         +F E    D++++N++I  Y+  G+T     LF  
Sbjct: 254 SHDYVLTGFISLYSKC-GKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKE 312

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL-QQILAMVKKAGLLSDLYVGSALVS 239
           +   G R        T  SL+       +SG  +L   I     K+  LS   V +AL +
Sbjct: 313 LMLSGARL----RSSTLVSLVP------VSGHLMLIYAIHGYCLKSNFLSHASVSTALTT 362

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------- 274
            +++L     ARK+F++  +K++ S N ++ G  +                         
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422

Query: 275 ----------------GKEVHGYLIRSGLFD-MVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                           GK VH  L+RS  F+  + V   L+ MYAKCG+I ++R +F  M
Sbjct: 423 ITCILSACAQLGALSLGKWVHD-LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             K+ V+WNTMISG   +G  +EA+  F  M   G+  +  + +  L +C+  G +  G 
Sbjct: 482 TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGD 541

Query: 378 QIHGEGL-KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           +I    + + G +  V     ++ +   AG+L R L+    M  E     W +++GA
Sbjct: 542 EIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGA 598



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 127/568 (22%), Positives = 239/568 (42%), Gaps = 53/568 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H QI+ HGF  D+ L   L      +G +  A  +F  +   +   +  ++ G++     
Sbjct: 40  HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGF---KFGMQVHCLVLKSNQTFDGL 124
           + +  +F  + ++  L       S   A      SGF   + G  +H   +      + L
Sbjct: 100 HSSLSVFAHLRKSTDL----KPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELL 155

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           + + ++ MY       D AR++F+ +  +D I WN++IS Y +    +   ++F  +  E
Sbjct: 156 LGSNIVKMYFKFWRVED-ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINE 214

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                 + +  T   ++ A   + L    L  QI ++  K G  S  YV +  +S +++ 
Sbjct: 215 S---CTRLDTTTLLDILPAV--AELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKC 269

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE--------------------------- 277
           G       +F +  + ++V+ N ++ G     E                           
Sbjct: 270 GKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV 329

Query: 278 -----------VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                      +HGY ++S      +V   L  +Y+K   I+ +R +F     K   SWN
Sbjct: 330 PVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN 389

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            MISG  QNG  E+AI  F  M++     +  ++   LS+CA LG + LG+ +H      
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST 449

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
             +S + VS AL+ +YA  G ++   ++F LM + ++V+WN++I  +        EA+  
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYG-LHGQGQEALNI 508

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYG 505
           + +M  +G +P  VTF+ +L A S   + K G ++   +I +Y           ++   G
Sbjct: 509 FYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILG 568

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMI 533
           + G +    +    MS       W +++
Sbjct: 569 RAGHLQRALQFIEAMSIEPGSSVWETLL 596


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 260/665 (39%), Positives = 384/665 (57%), Gaps = 15/665 (2%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            + +HG  + +G      V + L  +Y K    DD+R VF  +   D++ WNT+++GL  
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPG 192

Query: 335 NGCYEEAIMNFCAMRRDG-LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           +    EA+  F  M   G +   + +L S+L + A    + +G+ +HG G+K GL     
Sbjct: 193 S----EALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEH 248

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V   L+SLY+  G +     +F  M   D V++N++I  ++    +V  +V+ + ++  +
Sbjct: 249 VVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYS-VNGMVESSVELFKELTAS 307

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           GW PN  T + ++   S F    L   +HA V+K  +  +  +  AL + Y +  +M+  
Sbjct: 308 GWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESA 367

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
             IF  M E+  E SWN+MISGY  N L   A+ L   M +   + +  T ++ LSACA 
Sbjct: 368 RSIFDAMLEKTME-SWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAH 426

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           +  L  G  VH    +  LE +V + +AL+DMY+KCG I  A   FD M  +NV SWN+M
Sbjct: 427 LGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAM 486

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           ISGY  HG G +AL L+  M     LP   TF+ V+ ACSH GLVDEG K F+ M+  Y 
Sbjct: 487 ISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYR 546

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMP---ITPNSLIWRTVLGACCRANCRKTEL 750
           + P +E  +CMVDLLGRAG+L++  E I++ P   I P   +W  +LGAC     + ++L
Sbjct: 547 ITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPG--VWGALLGACMVH--KNSDL 602

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
            + A+  LFE++ +NA  YVLL+N+Y S   + + A  R+  K  ++ K  GC+ + + D
Sbjct: 603 AKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGD 662

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
             HVF+AGD  HP+ + IY  L+ L  KM +AGY P T+ AL+D+E E KE +V  HSEK
Sbjct: 663 RPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEK 722

Query: 871 IAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +A+AF +L+      IRI+KNLRVC DCH+A KFISK+  R IV+RD++RFHHF DG CS
Sbjct: 723 LAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCS 782

Query: 930 CGDYW 934
           CGDYW
Sbjct: 783 CGDYW 787



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 230/503 (45%), Gaps = 66/503 (13%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H   +  G+A D F+ + L  +Y ++     A K+FD +P  +++ W  +++G   
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLP- 191

Query: 64  KGMSNEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
               +EA + F  MV AG +  +   L S LRA  E   S    G  VH   +K      
Sbjct: 192 ---GSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEA--SHMAMGRCVHGYGVKCGLAEH 246

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V   L+++Y  C +  D A+ +F+ ++  DL+++N++IS YS  G   S  +LF  + 
Sbjct: 247 EHVVTGLMSLYSKCGD-MDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELT 305

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQIL-AMVKKAGLLSDLYVGSALVSGF 241
             G+R    PN  T  ++I   YS    G  LL + L A V KA L +D  V +AL + +
Sbjct: 306 ASGWR----PNSSTLVAVIP-VYSPF--GHELLARCLHAFVVKARLDADALVSTALTTLY 358

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------- 274
            RL +   AR IF+ M++K + S N ++ G  +                           
Sbjct: 359 CRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITIS 418

Query: 275 --------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                         GK VH  + +  L   V V   L++MYAKCG+I ++RS+F  M  K
Sbjct: 419 STLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNK 478

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           + VSWN MISG   +G   EA+  +  M    ++ ++ + +S + +C+  G +  GQ++ 
Sbjct: 479 NVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVF 538

Query: 381 GEGL-KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH--DQVSWNSVIGAF---- 433
                +  +   +     ++ L   AG L+  L++    P+       W +++GA     
Sbjct: 539 RVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHK 598

Query: 434 -ADSEALVSEAVKYYLDMRRAGW 455
            +D   L S+ + + LD   AG+
Sbjct: 599 NSDLAKLASQKL-FELDSENAGY 620


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/712 (35%), Positives = 405/712 (56%), Gaps = 42/712 (5%)

Query: 260 KNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
           K ++     ++ + + K++H   IR+      +  + ++++Y     + ++  +F+ +  
Sbjct: 9   KTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKS 67

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
              ++W ++I        + +A+ +F  MR  G    +    S L SC  +  +  G+ +
Sbjct: 68  PPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADA-GYLSR--------------------------CL 412
           HG  ++LG+D D+   NAL+++YA   G  S+                          C+
Sbjct: 128 HGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCI 187

Query: 413 ---------KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
                    +VF +MP  D VS+N++I  +A S  +  +A++   +M      P+  T  
Sbjct: 188 MPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQS-GMYEDALRMVREMGTTDLKPDSFTLS 246

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           ++L   S +     G ++H  VI+  + ++  I ++L+  Y K   ++D E++F+R+   
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY-C 305

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
           RD +SWNS+++GY+ N    +A+ L   M+    +     F++V+ ACA +ATL  G ++
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           H   +R     ++ I SALVDMYSKCG I  A + FD M V +  SW ++I G+A HGHG
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG 425

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC 703
            +A++LF +MK  G  P+ V FV VL+ACSH GLVDE + +F SM++VYGL  +LE ++ 
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP 763
           + DLLGRAG+L++   FI+KM + P   +W T+L +C  +  +  EL  K A  +F ++ 
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSC--SVHKNLELAEKVAEKIFTVDS 543

Query: 764 QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHP 823
           +N   YVL+ NMYAS G+W+++AK R  M++  ++K+  CSW+ MK+  H FV+GD SHP
Sbjct: 544 ENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHP 603

Query: 824 EKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSK 882
             D I E LK + ++M   GYV  T   L D++ E K +L+  HSE++AVAF ++     
Sbjct: 604 SMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPG 663

Query: 883 LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             IR+ KN+R+C DCH A KFISKI  REI++RD++RFHHFN G CSCGDYW
Sbjct: 664 TTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 141/547 (25%), Positives = 248/547 (45%), Gaps = 56/547 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+    Q L H  A      + +I++Y  +  L  A  LF  +     ++W  ++  +T 
Sbjct: 29  AQFIRTQSLSHTSA------SIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTD 82

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           + + ++A   F EM  +G   +     SVL++C        +FG  VH  +++     D 
Sbjct: 83  QSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMM--MDLRFGESVHGFIVRLGMDCDL 140

Query: 124 LVSNVLIAMYGSCLE--STDCARRIFEEIETRDLISWNSIISVYS--QRGDTISVFKLFS 179
              N L+ MY   L   S      +F+E+  R   S +  +   +        SV ++F 
Sbjct: 141 YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFE 200

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSG---SYLLQQILAMVKKAGLLSDLYVGSA 236
            M R+                   +Y+++++G   S + +  L MV++ G  +DL   S 
Sbjct: 201 VMPRKD----------------VVSYNTIIAGYAQSGMYEDALRMVREMGT-TDLKPDSF 243

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
            +S             IF + +  +V+          KGKE+HGY+IR G+   V +G+ 
Sbjct: 244 TLSSVL---------PIFSEYV--DVI----------KGKEIHGYVIRKGIDSDVYIGSS 282

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           LV+MYAK   I+DS  VF  +  +D +SWN++++G  QNG Y EA+  F  M    +   
Sbjct: 283 LVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPG 342

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
             +  S + +CA L  + LG+Q+HG  L+ G  S++ +++AL+ +Y+  G +    K+F 
Sbjct: 343 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFD 402

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            M   D+VSW ++I   A       EAV  + +M+R G  PN V F+ +L A S   +  
Sbjct: 403 RMNVLDEVSWTAIIMGHA-LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 461

Query: 477 LGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
                   + K Y +  E     A+    G+ G++++     ++M        W++++S 
Sbjct: 462 EAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSS 521

Query: 536 -YIHNEL 541
             +H  L
Sbjct: 522 CSVHKNL 528



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 205/448 (45%), Gaps = 47/448 (10%)

Query: 354 MSSNFSLISTL-SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
           MSS+ +LI TL  +   +      +Q+H + ++    S  S S  ++S+Y +   L   L
Sbjct: 1   MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSAS-IVISIYTNLKLLHEAL 59

Query: 413 KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
            +F  +     ++W SVI  F D ++L S+A+  +++MR +G  P+   F ++L + +  
Sbjct: 60  LLFKTLKSPPVLAWKSVIRCFTD-QSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMM 118

Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM---------------------- 510
              + G  VH  +++  +  +    NAL++ Y K   M                      
Sbjct: 119 MDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGD 178

Query: 511 --------------DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
                         D   ++F  M  R+D VS+N++I+GY  + +   A+ +V  M    
Sbjct: 179 EDVKAETCIMPFGIDSVRRVFEVMP-RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD 237

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
            + D FT ++VL   +    + +G E+H   +R  ++ DV IGS+LVDMY+K  RI+ + 
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
           R F  +  R+  SWNS+++GY ++G  ++AL LF QM      P  V F  V+ AC+H  
Sbjct: 298 RVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 357

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
            +  G K         G    +   S +VD+  + G +    +  ++M +         +
Sbjct: 358 TLHLG-KQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAII 416

Query: 737 LGACCRANCRKTELGRKAANMLFEMEPQ 764
           +G     +      G +A ++  EM+ Q
Sbjct: 417 MGHALHGH------GHEAVSLFEEMKRQ 438


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 251/701 (35%), Positives = 397/701 (56%), Gaps = 69/701 (9%)

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
           M+AK G + D+R VF  M  +D+VSW  M+ GL++ G + EAI     M  DG   + F+
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG------------- 406
           L + LSSCA      +G+++H   +KLGL S V V+N++L++Y   G             
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 407 ---------------YLSR---CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
                          +L R      +F  MP+   VSWN++I  + +   L ++A+K + 
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGY-NQNGLDAKALKLFS 179

Query: 449 DM-RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
            M   +  +P+  T  ++L+A ++    ++G QVHA +++  +A  + + NAL+S Y K 
Sbjct: 180 RMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS 239

Query: 508 GEMDDCEKIFARMSE--------------------------------RRDEVSWNSMISG 535
           G +++  +I  +  E                                 RD V+W +MI G
Sbjct: 240 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 299

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
           Y  N    +A++L   M+  G   + +T A VLS CAS+A L+ G ++H   +R+ LE  
Sbjct: 300 YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQS 359

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKALTLFSQMK 654
             + +A++ MY++ G   +A R FD +  R    +W SMI   A+HG G++A+ LF +M 
Sbjct: 360 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 419

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
             G  PD +T+VGVLSACSHAG V+EG +++  +   + + P++  ++CMVDLL RAG  
Sbjct: 420 RAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLF 479

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
            + +EFI +MP+ P+++ W ++L A CR + +  EL   AA  L  ++P N+  Y  +AN
Sbjct: 480 SEAQEFIRRMPVEPDAIAWGSLLSA-CRVH-KNAELAELAAEKLLSIDPNNSGAYSAIAN 537

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           +Y++ G+W D A+  KA KE  V+KE G SW  ++  +HVF A D  HP++D +Y     
Sbjct: 538 VYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAAR 597

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRV 893
           + ++++ AG+VP  +  L D++ E KE+L+S HSEK+A+AF +++   K  +R+MKNLRV
Sbjct: 598 MWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRV 657

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           C DCH+A K ISK+  REI++RD+ RFHHF DG CSC DYW
Sbjct: 658 CNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 151/541 (27%), Positives = 259/541 (47%), Gaps = 71/541 (13%)

Query: 29  VYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYA 88
           ++ + G LA A  +F EMP+R++VSW  +V G    G   EA K   +M   GF   ++ 
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST-------- 140
           L +VL +C          G +VH  V+K        V+N ++ MYG C +S         
Sbjct: 61  LTNVLSSCAVTQAGAV--GRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFER 118

Query: 141 ----------------------DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
                                 D A  +FE +  R ++SWN++I+ Y+Q G      KLF
Sbjct: 119 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLF 178

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           SRM  E    S+ P+E+T  S+++A  +  L    + +Q+ A + +  +  +  V +AL+
Sbjct: 179 SRMLHES---SMAPDEFTITSVLSACAN--LGNVRIGKQVHAYILRTEMAYNSQVTNALI 233

Query: 239 SGFARLGNFYYARKIFEQMIQK--NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
           S +A+ G+   AR+I +Q ++   NV+S   L+EG                         
Sbjct: 234 STYAKSGSVENARRIMDQSMETDLNVISFTALLEG------------------------- 268

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
               Y K G ++ +R +F  M  +D V+W  MI G +QNG  +EAI  F +M   G   +
Sbjct: 269 ----YVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPN 324

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF- 415
           +++L + LS CASL  +  G+QIH   ++  L+   SVSNA++++YA +G      ++F 
Sbjct: 325 SYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFD 384

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
            +    + ++W S+I A A       EAV  + +M RAG  P+ +T++ +L+A S     
Sbjct: 385 QVCWRKETITWTSMIVALAQ-HGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFV 443

Query: 476 KLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
             G + + Q+  ++ +A E +    ++    + G   + ++   RM    D ++W S++S
Sbjct: 444 NEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLS 503

Query: 535 G 535
            
Sbjct: 504 A 504



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 144/306 (47%), Gaps = 19/306 (6%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +V     L+  YV++GD+ SA ++F  M +R+ V+W  ++ GY   G ++EA  +F+ M+
Sbjct: 258 NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI 317

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             G   N Y L +VL  C     +   +G Q+HC  ++S       VSN +I MY     
Sbjct: 318 TCGPEPNSYTLAAVLSVCASL--ACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARS-G 374

Query: 139 STDCARRIFEEIETR-DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
           S   ARR+F+++  R + I+W S+I   +Q G       LF  M R G    ++P+  T+
Sbjct: 375 SFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAG----VEPDRITY 430

Query: 198 GSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
             +++A   +  V  G     QI    + A  +S     + +V   AR G F  A++   
Sbjct: 431 VGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHY---ACMVDLLARAGLFSEAQEFIR 487

Query: 256 QM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAKCGTIDD 309
           +M ++ + ++   L+   R  K      L    L  +    +G    + N+Y+ CG   D
Sbjct: 488 RMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSD 547

Query: 310 SRSVFR 315
           +  +++
Sbjct: 548 AARIWK 553



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 176/390 (45%), Gaps = 58/390 (14%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV-RAGF 82
           N ++++   +G +  A  LF+ MPDR+ VSW  +++GY   G+  +A K+F  M+  +  
Sbjct: 128 NAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSM 187

Query: 83  LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC 142
             + + + SVL AC   G    + G QVH  +L++   ++  V+N LI+ Y     S + 
Sbjct: 188 APDEFTITSVLSACANLG--NVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS-GSVEN 244

Query: 143 ARRIFEE---------------------------------IETRDLISWNSIISVYSQRG 169
           ARRI ++                                 +  RD+++W ++I  Y Q G
Sbjct: 245 ARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNG 304

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLS 229
                  LF  M   G     +PN YT  ++++   S  L+     +QI     ++ L  
Sbjct: 305 RNDEAIDLFRSMITCG----PEPNSYTLAAVLSVCAS--LACLDYGKQIHCRAIRSLLEQ 358

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMI-QKNVVSMNGL---MEGRRKGKEVHGY---L 282
              V +A+++ +AR G+F +AR++F+Q+  +K  ++   +   +    +G+E  G    +
Sbjct: 359 SSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEM 418

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGC 337
           +R+G+        G+++  +  G +++ +  +        I  +   +  M+  L + G 
Sbjct: 419 LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGL 478

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
           + EA   F  +RR  +     +  S LS+C
Sbjct: 479 FSEA-QEF--IRRMPVEPDAIAWGSLLSAC 505



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 16/167 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR-NSVSWACIVSGYTH 63
           K  H + ++        + N +I +Y R G    A ++FD++  R  +++W  ++     
Sbjct: 345 KQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQ 404

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKFGMQVHCLVLKSNQTF 121
            G   EA  +F+EM+RAG   +R     VL AC   G    G ++  Q+     K+    
Sbjct: 405 HGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQI-----KNEHQI 459

Query: 122 DGLVSNV-----LIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS 163
              +S+      L+A  G   E+ +  RR+  E    D I+W S++S
Sbjct: 460 APEMSHYACMVDLLARAGLFSEAQEFIRRMPVE---PDAIAWGSLLS 503


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 266/757 (35%), Positives = 414/757 (54%), Gaps = 47/757 (6%)

Query: 221  MVKKAGLLS-DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-------- 271
            +V+  GL   DL+  + L++ + ++G F  A ++F+ + ++N+VS   L++G        
Sbjct: 454  VVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFE 513

Query: 272  ---------RRKGKEVHGYLIRSGLFDMVA------------------------VGNGLV 298
                     R +G EV+ +++ + L  +VA                        VG+ L+
Sbjct: 514  EASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALI 573

Query: 299  NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
            + Y+ CG + D+R VF  ++GKD+V+W  M+S   +N C E  +  F  MR      + F
Sbjct: 574  DAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPF 633

Query: 359  SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
            +L S L +   L  ++LG+ IH   +K   D++  V  ALL +YA  G +      F ++
Sbjct: 634  ALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMV 693

Query: 419  PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
               D + W+ +I  +A       +A + ++ M R+  SPN  +  ++L A ++  +  LG
Sbjct: 694  TNDDVILWSLMISRYAQCNQ-NEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLG 752

Query: 479  HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
             Q+H   IK    +E  + NAL+  Y KC +M+   +IF+ + +  +EVSWN++I GY  
Sbjct: 753  KQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRD-VNEVSWNTIIVGYSK 811

Query: 539  NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
            +     A+++   M          T+++VL ACAS A++    +VH    ++    D ++
Sbjct: 812  SGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIV 871

Query: 599  GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
             ++L+D Y+KCG I  A   F+ +   ++ SWN++ISGYA HG    A  LF  M  +  
Sbjct: 872  SNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSI 931

Query: 659  LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
              + +TFV +LS C   GLV +G   F SM   +G+ P +E ++C+V LLGRAG L+   
Sbjct: 932  KANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDAL 991

Query: 719  EFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYAS 778
             FI  +P  P++++WR +L +C     +  ELGR +A  + E+EPQ+   YVLL+NMY++
Sbjct: 992  NFIGDIPSAPSAMVWRALLSSCIVH--KNVELGRFSAEKVLEIEPQDETTYVLLSNMYSA 1049

Query: 779  GGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQK 838
             G  + VA  RK+M+   V+KE G SWV +K  VH F  G E HP   +I   L+ LN K
Sbjct: 1050 AGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLK 1109

Query: 839  MRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDC 897
                GYVP T   L DLE E K  ++  HSE++A+A+ L       PIRIMKNLR C DC
Sbjct: 1110 AIREGYVPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIMKNLRSCLDC 1169

Query: 898  HSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            H+ FK ISKIV +EI++RD NRFHHF +G CSCGDYW
Sbjct: 1170 HAIFKVISKIVKQEIIVRDINRFHHFEEGTCSCGDYW 1206



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 150/583 (25%), Positives = 271/583 (46%), Gaps = 58/583 (9%)

Query: 1    SKDAKLFHLQILKHG--FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIV 58
            ++  +  H  +++ G     D+F  N L+N+Y +VG   SA ++FD +P+RN VS+  +V
Sbjct: 444  ARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLV 503

Query: 59   SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
             G+  +G   EA  +F+ +   G  +N++ L +VL+        G  +G  VH    K  
Sbjct: 504  QGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWG--VHACACKLG 561

Query: 119  QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
               +  V + LI  Y  C   +D ARR+F+ I  +D ++W +++S YS+     +  ++F
Sbjct: 562  HDRNAFVGSALIDAYSMCGVVSD-ARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIF 620

Query: 179  SRMQREGFRYSL-KPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
            S+M     R ++ K N +   S++ AA    LS   L + I A   K    ++ +V  AL
Sbjct: 621  SKM-----RVAVSKLNPFALTSVLRAAV--CLSSVVLGKGIHACSVKTLYDTERHVYGAL 673

Query: 238  VSGFARLGNFYYARKIFEQMIQKNVV---------------------------------- 263
            +  +A+ GN   AR  FE +   +V+                                  
Sbjct: 674  LDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNE 733

Query: 264  -SMNGLMEGRRK------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
             S++ +++          GK++H + I+ G    + VGN L+++YAKC  ++ S  +F  
Sbjct: 734  FSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSS 793

Query: 317  MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
            +   + VSWNT+I G  ++G  E A+  F  MR   + S+  +  S L +CAS   I   
Sbjct: 794  LRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHV 853

Query: 377  QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
             Q+H    K   +SD  VSN+L+  YA  G +    ++F  + E D VSWN++I  +A  
Sbjct: 854  GQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYA-V 912

Query: 437  EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
                + A + +  M +     N +TF+ +L+   S  +   G  +    ++ +   E ++
Sbjct: 913  HGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLF-DSMRLDHGIEPSM 971

Query: 497  EN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI 537
            E+   ++   G+ G ++D       +      + W +++S  I
Sbjct: 972  EHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCI 1014



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 207/409 (50%), Gaps = 4/409 (0%)

Query: 273 RKGKEVHGYLIRSGLFDMVAV--GNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
           R G+ VHG+++RSG    + +   N L+NMY K G    +  VF  +  ++ VS+ T++ 
Sbjct: 445 RGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQ 504

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           G    G +EEA   F  +R +G   + F L + L    ++  + L   +H    KLG D 
Sbjct: 505 GHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDR 564

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           +  V +AL+  Y+  G +S   +VF  +   D V+W +++  +++++      ++ +  M
Sbjct: 565 NAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDC-PENTLQIFSKM 623

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
           R A    N     ++L AA   S   LG  +HA  +K     E  +  ALL  Y KCG +
Sbjct: 624 RVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNI 683

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
           +D    F  M    D + W+ MIS Y       +A  L   MM+     + F+ ++VL A
Sbjct: 684 EDARLAF-EMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQA 742

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
           CA++  L+ G ++H   ++   E ++ +G+AL+D+Y+KC  ++ +   F  +   N  SW
Sbjct: 743 CANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSW 802

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           N++I GY++ G G+ AL++F +M+        VT+  VL AC+    ++
Sbjct: 803 NTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASIN 851



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 11/279 (3%)

Query: 478 GHQVHAQVIKYNVANETTI--ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           G  VH  V++        +   N LL+ Y K G      ++F  + ER + VS+ +++ G
Sbjct: 447 GRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPER-NMVSFVTLVQG 505

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
           +       +A  L   +   G  ++ F   TVL    ++ TL     VHAC  +   + +
Sbjct: 506 HALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRN 565

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
             +GSAL+D YS CG +  A R FD +  ++  +W +M+S Y+ +   +  L +FS+M++
Sbjct: 566 AFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRV 625

Query: 656 DGPLPDHVTFVGVLSA--CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGE 713
                +      VL A  C  + ++ +G  H  S+  +Y    +   +  ++D+  + G 
Sbjct: 626 AVSKLNPFALTSVLRAAVCLSSVVLGKGI-HACSVKTLYDT--ERHVYGALLDMYAKCGN 682

Query: 714 LDKIEEFINKMPITPNSLIWRTVLG--ACCRANCRKTEL 750
           ++       +M    + ++W  ++   A C  N +  EL
Sbjct: 683 IED-ARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFEL 720


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 285/847 (33%), Positives = 440/847 (51%), Gaps = 89/847 (10%)

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +  N+++  Y      +D A  +F+ +  RD+ SWN+++S Y Q    +   + F  M R
Sbjct: 72  ITHNIMMNGYAKQGSLSD-AEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G      PN +TF  ++ +     L    L  Q+L +  K     D  V +ALV  F R
Sbjct: 131 SGDSL---PNAFTFCCVMKSC--GALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
            G   +A ++F Q+ +  +   N ++ G                             YAK
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAG-----------------------------YAK 216

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
              ID +   F  M  +D VSWN MI+ L Q+G   EA+     M R G+   + +  S+
Sbjct: 217 LYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSS 276

Query: 364 LSSCA---SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           L++CA   SLGW   G+Q+H + ++     D  V++AL+ LYA  G      +VF  + +
Sbjct: 277 LTACARLFSLGW---GKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQD 333

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            + VSW  +IG     E   S++V+ +  MR    + +      +++   +     LG Q
Sbjct: 334 RNSVSWTVLIGGSLQYECF-SKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQ 392

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER----------------- 523
           +H+  +K        + N+L+S Y KCG++ + E +F+ MSER                 
Sbjct: 393 LHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGN 452

Query: 524 -------------RDEVSWNSMISGYIHNELLPKAMNLVWFMM-QRGQRLDHFTFATVLS 569
                        R+ ++WN+M+  YI +      + +   M+ Q+    D  T+ T+  
Sbjct: 453 IIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFR 512

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
            CA +   + G ++    V+A L  +V + +A + MYSKCGRI  A + FDL+  ++V S
Sbjct: 513 GCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVS 572

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           WN+MI+GY++HG G +A   F  M   G  PD++++V VLS CSH+GLV EG  +F  M+
Sbjct: 573 WNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMT 632

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKT 748
           +V+G+ P LE FSCMVDLLGRAG L + ++ I+KMP+ P + +W  +L AC    N    
Sbjct: 633 RVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGN---D 689

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
           EL   AA  +FE++  ++ +Y+LLA +Y+  GK +D A+ RK M++  +KK  G SW+ +
Sbjct: 690 ELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEV 749

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
           ++ VHVF A D SHP+   I  KL EL +K+   GYV           P S+     +HS
Sbjct: 750 ENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYVRTE-------SPRSE----IHHS 798

Query: 869 EKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGK 927
           EK+AVAF +++  + +PI IMKNLR+CGDCH+  K IS +  RE V+RD  RFHHF  G 
Sbjct: 799 EKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGS 858

Query: 928 CSCGDYW 934
           CSCGDYW
Sbjct: 859 CSCGDYW 865



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 152/624 (24%), Positives = 267/624 (42%), Gaps = 118/624 (18%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +V   N ++N Y + G L+ A +LFD MP R+  SW  ++SGY       +  + F  M 
Sbjct: 70  NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129

Query: 79  RAG-FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC- 136
           R+G  L N +    V+++C   G    +   Q+  L  K +   D  V   L+ M+  C 
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCR--ELAPQLLGLFWKFDFWGDPDVETALVDMFVRCG 187

Query: 137 -----------------------------LESTDCARRIFEEIETRDLISWNSIISVYSQ 167
                                        L   D A   FE++  RD++SWN +I+  SQ
Sbjct: 188 YVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQ 247

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
            G       L   M R+G R  L    YT      A   S+  G    +Q+ A V ++  
Sbjct: 248 SGRVREALGLVVEMHRKGVR--LDSTTYTSSLTACARLFSLGWG----KQLHAKVIRSLP 301

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------- 274
             D YV SAL+  +A+ G+F  A+++F  +  +N VS   L+ G  +             
Sbjct: 302 QIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQ 361

Query: 275 ----------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
                                       G+++H   ++SG    + V N L+++YAKCG 
Sbjct: 362 MRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGD 421

Query: 307 IDDSRSVFRFMIGKDSVSWNTMIS----------------GLD---------------QN 335
           + ++  VF  M  +D VSW +MI+                G+D               Q+
Sbjct: 422 LQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQH 481

Query: 336 GCYEEAIMNFCAMRRDGLMSSNF-SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           G  E+ +  + AM     ++ ++ + ++    CA +G   LG QI G  +K GL  +VSV
Sbjct: 482 GAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSV 541

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           +NA +++Y+  G +S   K+F L+   D VSWN++I  ++    +  +A K + DM   G
Sbjct: 542 ANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYS-QHGMGKQAAKTFDDMLSKG 600

Query: 455 WSPNGVTFINILAAASSFSM---GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             P+ ++++ +L+  S   +   GKL   +  +V  + ++      + ++   G+ G + 
Sbjct: 601 AKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRV--HGISPGLEHFSCMVDLLGRAGHLT 658

Query: 512 DCEKIFARMSERRDEVSWNSMISG 535
           + + +  +M  +     W +++S 
Sbjct: 659 EAKDLIDKMPMKPTAEVWGALLSA 682



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 215/487 (44%), Gaps = 72/487 (14%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF------------------ 316
            + +HG L+  GL   V + N L++ Y  CG + D+R + R                   
Sbjct: 23  ARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPNVITHNIMMNGYA 82

Query: 317 --------------MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG-LMSSNFSLI 361
                         M  +D  SWNT++SG  Q   + + +  F +M R G  + + F+  
Sbjct: 83  KQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFC 142

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY-------------- 407
             + SC +LG   L  Q+ G   K     D  V  AL+ ++   GY              
Sbjct: 143 CVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERP 202

Query: 408 -----------------LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
                            +   ++ F  M E D VSWN +I A + S   V EA+   ++M
Sbjct: 203 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQS-GRVREALGLVVEM 261

Query: 451 RRAGWSPNGVTFINILAA-ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
            R G   +  T+ + L A A  FS+G  G Q+HA+VI+     +  + +AL+  Y KCG 
Sbjct: 262 HRKGVRLDSTTYTSSLTACARLFSLG-WGKQLHAKVIRSLPQIDPYVASALIELYAKCGS 320

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
             + +++F  + + R+ VSW  +I G +  E   K++ L   M      +D F  AT++S
Sbjct: 321 FKEAKRVFNSLQD-RNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLIS 379

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
            C +   L  G ++H+  +++     +V+ ++L+ +Y+KCG +  A   F  M  R++ S
Sbjct: 380 GCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVS 439

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           W SMI+ Y++ G+  KA   F  M       + +T+  +L A    G  ++G K + +M 
Sbjct: 440 WTSMITAYSQIGNIIKAREFFDGMD----TRNAITWNAMLGAYIQHGAEEDGLKMYSAML 495

Query: 690 QVYGLIP 696
               + P
Sbjct: 496 SQKDVTP 502



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 203/436 (46%), Gaps = 51/436 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H ++++     D ++ + LI +Y + G    A ++F+ + DRNSVSW  ++ G    
Sbjct: 290 KQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQY 349

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
              +++ ++F +M      ++++AL +++  C          G Q+H L LKS      +
Sbjct: 350 ECFSKSVELFNQMRAELMAIDQFALATLISGC--FNRMDLCLGRQLHSLCLKSGHNRAIV 407

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           VSN LI++Y  C +  + A  +F  +  RD++SW S+I+ YSQ G+ I   + F  M   
Sbjct: 408 VSNSLISLYAKCGDLQN-AEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTR 466

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                   N  T+ +++  AY    +    L+   AM+ +  +  D      L  G A +
Sbjct: 467 --------NAITWNAML-GAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADI 517

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
           G    A K+ +Q+I                     G+ +++GL   V+V N  + MY+KC
Sbjct: 518 G----ANKLGDQII---------------------GHTVKAGLILNVSVANAAITMYSKC 552

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G I +++ +F  + GKD VSWN MI+G  Q+G  ++A   F  M   G      S ++ L
Sbjct: 553 GRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVL 612

Query: 365 SSCASLGWIMLGQ-------QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
           S C+  G +  G+       ++H  G+  GL+      + ++ L   AG+L+    +   
Sbjct: 613 SGCSHSGLVQEGKLYFDMMTRVH--GISPGLEH----FSCMVDLLGRAGHLTEAKDLIDK 666

Query: 418 MPEHDQVS-WNSVIGA 432
           MP       W +++ A
Sbjct: 667 MPMKPTAEVWGALLSA 682



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 137/331 (41%), Gaps = 71/331 (21%)

Query: 481 VHAQVIKYNVANETTIENALLSCYGKC--------------------------------G 508
           +H +++   +A+   ++N LL  Y  C                                G
Sbjct: 26  LHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQG 85

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH-FTFATV 567
            + D E++F RM  RRD  SWN+++SGY         +     M + G  L + FTF  V
Sbjct: 86  SLSDAEELFDRM-PRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCV 144

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR---------- 617
           + +C ++   E   ++     +     D  + +ALVDM+ +CG +D+ASR          
Sbjct: 145 MKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTI 204

Query: 618 ---------------------FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
                                +F+ M  R+V SWN MI+  ++ G   +AL L  +M   
Sbjct: 205 FCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRK 264

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF--SCMVDLLGRAGEL 714
           G   D  T+   L+AC  A L   G+   +  ++V   +PQ++ +  S +++L  + G  
Sbjct: 265 GVRLDSTTYTSSLTAC--ARLFSLGWGK-QLHAKVIRSLPQIDPYVASALIELYAKCGSF 321

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANC 745
            + +   N +    NS+ W  ++G   +  C
Sbjct: 322 KEAKRVFNSLQ-DRNSVSWTVLIGGSLQYEC 351


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 255/662 (38%), Positives = 384/662 (58%), Gaps = 7/662 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+ VH  L   G+         L NMYAKC    D+R VF  M  +D V+WN +++G  +
Sbjct: 78  GRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYAR 137

Query: 335 NGCYEEAIMNFCAMRRD-GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           NG    A+     M+ + G    + +L+S L +CA+   +   ++ H   ++ GL+  V+
Sbjct: 138 NGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVN 197

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V+ A+L  Y   G +     VF  MP  + VSWN++I  +A +     EA+  +  M   
Sbjct: 198 VATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN-GDSREALALFNRMVEE 256

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G     V+ +  L A         G +VH  +++  + +  ++ NAL++ Y KC  +D  
Sbjct: 257 GVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLA 316

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
             +F  + +RR +VSWN+MI G   N     A+ L   M     + D FT  +V+ A A 
Sbjct: 317 SHVFDEL-DRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALAD 375

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           ++   +   +H   +R  L+ DV + +AL+DMY+KCGR++ A   F+    R+V +WN+M
Sbjct: 376 ISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAM 435

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I GY  HG G  A+ LF +MK  G +P+  TF+ VLSACSHAGLVDEG ++F SM + YG
Sbjct: 436 IHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYG 495

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           L P +E +  MVDLLGRAG+LD+   FI KMP+ P   ++  +LGAC     +  EL  +
Sbjct: 496 LEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGAC--KLHKNVELAEE 553

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
           +A  +FE+ PQ  V +VLLAN+YA+   W+DVA+ R AM++  ++K  G S + +K+ +H
Sbjct: 554 SAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIH 613

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
            F +G  +H +   IY +L +L ++++  GYVP T  ++ D+E + K  L++ HSEK+A+
Sbjct: 614 TFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTD-SIHDVEDDVKAQLLNTHSEKLAI 672

Query: 874 AFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           AF L R +    I+I KNLRVC DCH+A K IS + GREI++RD  RFHHF DGKCSCGD
Sbjct: 673 AFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGD 732

Query: 933 YW 934
           YW
Sbjct: 733 YW 734



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 172/332 (51%), Gaps = 3/332 (0%)

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A+  F AM   G      +  S L  CA+ G +  G+ +H +    G+DS+   + AL +
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR-RAGWSPNG 459
           +YA     +   +VF  MP  D+V+WN+++  +A    L   A++  + M+   G  P+ 
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYA-RNGLARMAMEMVVRMQEEEGERPDS 161

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           +T +++L A ++        + HA  I+  +     +  A+L  Y KCG++     +F  
Sbjct: 162 ITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDW 221

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           M   ++ VSWN+MI GY  N    +A+ L   M++ G  +   +    L AC  +  L+ 
Sbjct: 222 MPT-KNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE 280

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           GM VH   VR  L+ +V + +AL+ MYSKC R+D AS  FD +  R   SWN+MI G A+
Sbjct: 281 GMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQ 340

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
           +G  + A+ LF++M+L+   PD  T V V+ A
Sbjct: 341 NGCSEDAVRLFTRMQLENVKPDSFTLVSVIPA 372



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 223/494 (45%), Gaps = 53/494 (10%)

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
           A   F  M  AG         S+L+ C   G      G  VH  +       + L +  L
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARG--DLATGRAVHAQLAARGIDSEALAATAL 100

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
             MY  C    D ARR+F+ +  RD ++WN++++ Y++ G      ++  RMQ E     
Sbjct: 101 ANMYAKCRRPAD-ARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGE-- 157

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
            +P+  T  S++ A  ++    +       A+  ++GL   + V +A++  + + G+   
Sbjct: 158 -RPDSITLVSVLPACANARALAACREAHAFAI--RSGLEELVNVATAILDAYCKCGDIRA 214

Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRK----------------------------------- 274
           AR +F+ M  KN VS N +++G  +                                   
Sbjct: 215 ARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGE 274

Query: 275 ------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
                 G  VH  L+R GL   V+V N L+ MY+KC  +D +  VF  +  +  VSWN M
Sbjct: 275 LGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAM 334

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           I G  QNGC E+A+  F  M+ + +   +F+L+S + + A +   +  + IHG  ++L L
Sbjct: 335 ILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHL 394

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           D DV V  AL+ +YA  G ++    +F    E   ++WN++I  +  S      AV+ + 
Sbjct: 395 DQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYG-SHGFGKAAVELFE 453

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGK 506
           +M+  G  PN  TF+++L+A S   +   G +     +K +   E  +E+   ++   G+
Sbjct: 454 EMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTS-MKEDYGLEPGMEHYGTMVDLLGR 512

Query: 507 CGEMDDCEKIFARM 520
            G++D+      +M
Sbjct: 513 AGKLDEAWAFIQKM 526



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 168/348 (48%), Gaps = 26/348 (7%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   ++ G    V +   +++ Y + GD+ +A  +FD MP +NSVSW  ++ GY   G S
Sbjct: 184 HAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDS 243

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSG-FKFGMQVHCLVLKSNQTFDGLVS 126
            EA  +F  MV  G  +      SVL A Q CG  G    GM+VH L+++     +  V 
Sbjct: 244 REALALFNRMVEEGVDVTDV---SVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI MY  C +  D A  +F+E++ R  +SWN++I   +Q G +    +LF+RMQ E  
Sbjct: 301 NALITMYSKC-KRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLE-- 357

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
             ++KP+ +T  S+I A     +S     + I     +  L  D+YV +AL+  +A+ G 
Sbjct: 358 --NVKPDSFTLVSVIPALAD--ISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGR 413

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVG-----NGLVNMY 301
              AR +F    +++V++ N ++ G   G    G        +M ++G        +++ 
Sbjct: 414 VNIARILFNSARERHVITWNAMIHG--YGSHGFGKAAVELFEEMKSIGIVPNETTFLSVL 471

Query: 302 AKC---GTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA 341
           + C   G +D+ R  F  M     +      + TM+  L + G  +EA
Sbjct: 472 SACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEA 519



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 205/473 (43%), Gaps = 55/473 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H Q+   G   +      L N+Y +    A A ++FD MP R+ V+W  +V+GY   
Sbjct: 79  RAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARN 138

Query: 65  GMSNEACKMFKEMV-RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           G++  A +M   M    G   +   L SVL AC            + H   ++S      
Sbjct: 139 GLARMAMEMVVRMQEEEGERPDSITLVSVLPACANA--RALAACREAHAFAIRSGLEELV 196

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V+  ++  Y  C +    AR +F+ + T++ +SWN++I  Y+Q GD+     LF+RM  
Sbjct: 197 NVATAILDAYCKCGD-IRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVE 255

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           EG   +   +     +L        L     + ++L  +   GL S++ V +AL++ +++
Sbjct: 256 EGVDVT---DVSVLAALQACGELGCLDEGMRVHELLVRI---GLDSNVSVMNALITMYSK 309

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG-------------------------------- 271
                 A  +F+++ ++  VS N ++ G                                
Sbjct: 310 CKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSV 369

Query: 272 ---------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                      + + +HGY IR  L   V V   L++MYAKCG ++ +R +F     +  
Sbjct: 370 IPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHV 429

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           ++WN MI G   +G  + A+  F  M+  G++ +  + +S LS+C+  G +  G++ +  
Sbjct: 430 ITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE-YFT 488

Query: 383 GLK--LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
            +K   GL+  +     ++ L   AG L         MP    +S + +++GA
Sbjct: 489 SMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGA 541



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 25/208 (12%)

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
           LP A+     M   G      TF ++L  CA+   L  G  VHA      ++ + +  +A
Sbjct: 40  LPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATA 99

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK-LDGPLP 660
           L +MY+KC R   A R FD MPVR+  +WN++++GYAR+G    A+ +  +M+  +G  P
Sbjct: 100 LANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERP 159

Query: 661 DHVTFVGVLSAC-----------SHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           D +T V VL AC           +HA  +  G +   +++            + ++D   
Sbjct: 160 DSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVA------------TAILDAYC 207

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVL 737
           + G++       + MP T NS+ W  ++
Sbjct: 208 KCGDIRAARVVFDWMP-TKNSVSWNAMI 234



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 48/97 (49%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H   ++     DV++   LI++Y + G +  A  LF+   +R+ ++W  ++ GY  
Sbjct: 382 ARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGS 441

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G    A ++F+EM   G + N     SVL AC   G
Sbjct: 442 HGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAG 478


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 283/724 (39%), Positives = 399/724 (55%), Gaps = 54/724 (7%)

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK- 320
           V+   G +   R G  VH  +  SG    V VGNGLV+MY +CG  +++R VF  M  + 
Sbjct: 132 VLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERG 191

Query: 321 --DSVSWNTMISGLDQNGCYEEAIMNFCAMRRD-GLMSSNFSLISTLSSCASLGWIMLGQ 377
             D VSWN++++   Q G    A+  F  M  D G+     SL++ L +CAS+G    G+
Sbjct: 192 VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGK 251

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN------SVIG 431
           Q+HG  L+ GL  DV V NA++ +YA  G +    KVF  M   D VSWN      S IG
Sbjct: 252 QVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIG 311

Query: 432 AFADSEALVS----------------------------EAVKYYLDMRRAGWSPNGVTFI 463
            F D+  L                              EA+  +  MR  G  PN VT +
Sbjct: 312 RFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLV 371

Query: 464 NILAAASSFSMGKLGHQVHAQVIKY-------NVANETTIENALLSCYGKCGEMDDCEKI 516
           ++L+  +       G + H   IK+       +  ++  + NAL+  Y KC        +
Sbjct: 372 SLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 431

Query: 517 FARMSER-RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL--DHFTFATVLSACAS 573
           F  +  + R  V+W  +I G   +    +A+ L   M+Q    +  + FT +  L ACA 
Sbjct: 432 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 491

Query: 574 VATLERGMEVHACGVRACLEFDVV-IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
           +  L  G ++HA  +R   E  ++ + + L+DMYSK G +D A   FD M  RN  SW S
Sbjct: 492 LGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTS 551

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           +++GY  HG G++AL +F +M+  G +PD VTFV VL ACSH+G+VD+G  +F  M++ +
Sbjct: 552 LMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDF 611

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELG 751
           G++P  E ++CMVDLL RAG LD+  E I  MP+ P   +W  +L AC   AN    ELG
Sbjct: 612 GVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYAN---VELG 668

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
             AAN L E+E  N  +Y LL+N+YA+   W+DVA+ R  MK   +KK  GCSWV  + G
Sbjct: 669 EYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKG 728

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
              F AGD SHP    IY+ L++L Q+++  GYVP  +FAL D++ E K DL+S HSEK+
Sbjct: 729 TATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKL 788

Query: 872 AVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           A+A+ +LT     PIRI KNLR CGDCHSAF +IS I+  EI++RDS+RFHHF +G CSC
Sbjct: 789 ALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSC 848

Query: 931 GDYW 934
             YW
Sbjct: 849 RGYW 852



 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 186/659 (28%), Positives = 322/659 (48%), Gaps = 71/659 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEM-PDRNSV-SWACIVSGY 61
           A+L H Q+L  G  +D      +I++Y+     A A  +   + P  ++V  W  ++   
Sbjct: 45  AELIHQQLLVQGLPHDP---THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRS 101

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
            H G   +  ++++ M R G+  + Y    VL+AC E  PS F+ G  VH +V  S   +
Sbjct: 102 VHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEI-PS-FRCGASVHAVVFASGFEW 159

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETR---DLISWNSIISVYSQRGDTISVFKLF 178
           +  V N L++MYG C  + + AR++F+E+  R   DL+SWNSI++ Y Q GD+I   K+F
Sbjct: 160 NVFVGNGLVSMYGRC-GAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMF 218

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
            RM  +     ++P+  +  +++ A  S  +      +Q+     ++GL  D++VG+A+V
Sbjct: 219 ERMTED---LGIRPDAVSLVNVLPACAS--VGAWSRGKQVHGYALRSGLFEDVFVGNAVV 273

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLV 298
             +A+ G    A K+FE+M  K+VVS N ++ G                           
Sbjct: 274 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTG--------------------------- 306

Query: 299 NMYAKCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
             Y++ G  DD+  +F  +    I  + V+W+ +I+G  Q G   EA+  F  MR  G  
Sbjct: 307 --YSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSE 364

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLK--LGLDS-----DVSVSNALLSLYADAGY 407
            +  +L+S LS CA  G ++ G++ H   +K  L LD      D+ V NAL+ +Y+    
Sbjct: 365 PNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKS 424

Query: 408 LSRCLKVFFLMPEHDQ--VSWNSVIGAFADSEALVSEAVKYYLDMRRAG--WSPNGVTFI 463
                 +F L+P  D+  V+W  +IG  A      +EA++ +  M +      PN  T  
Sbjct: 425 PKAARAMFDLIPPKDRSVVTWTVLIGGNA-QHGEANEALELFSQMLQPDNFVMPNAFTIS 483

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETT-IENALLSCYGKCGEMDDCEKIFARMSE 522
             L A +     + G Q+HA V++    +    + N L+  Y K G++D    +F  M +
Sbjct: 484 CALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQ 543

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
            R+ VSW S+++GY  +    +A+ + + M + G   D  TF  VL AC+    +++G+ 
Sbjct: 544 -RNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGIN 602

Query: 583 VHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISG 636
            +  G+    +F VV G    + +VD+ S+ GR+D A      MP++   + W +++S 
Sbjct: 603 -YFNGMNK--DFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSA 658



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 157/570 (27%), Positives = 267/570 (46%), Gaps = 75/570 (13%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR---NSVSWACIVSGYTHK 64
           H  +   GF ++VF+ N L+++Y R G   +A ++FDEM +R   + VSW  IV+ Y   
Sbjct: 149 HAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQG 208

Query: 65  GMSNEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           G S  A KMF+ M    G   +  +L +VL AC   G   +  G QVH   L+S    D 
Sbjct: 209 GDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVG--AWSRGKQVHGYALRSGLFEDV 266

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V N ++ MY  C    + A ++FE ++ +D++SWN++++ YSQ G       LF +++ 
Sbjct: 267 FVGNAVVDMYAKC-GMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIRE 325

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           E     ++ N  T+                                     SA+++G+A+
Sbjct: 326 E----KIELNVVTW-------------------------------------SAVIAGYAQ 344

Query: 244 LGNFYYARKIFEQM----IQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLF----- 288
            G  + A  +F QM     + NVV++  L+ G         GKE H + I+  L      
Sbjct: 345 RGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDEND 404

Query: 289 --DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS--VSWNTMISGLDQNGCYEEAIMN 344
             D + V N L++MY+KC +   +R++F  +  KD   V+W  +I G  Q+G   EA+  
Sbjct: 405 PGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALEL 464

Query: 345 FCAMRRDG--LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD-VSVSNALLSL 401
           F  M +    +M + F++   L +CA LG +  G+QIH   L+   +S  + V+N L+ +
Sbjct: 465 FSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDM 524

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y+ +G +     VF  M + + VSW S++  +        EA++ + +M++ G  P+GVT
Sbjct: 525 YSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYG-MHGRGEEALQIFYEMQKVGLVPDGVT 583

Query: 462 FINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           F+ +L A S   M   G      + K + V         ++    + G +D+  ++   M
Sbjct: 584 FVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGM 643

Query: 521 SERRDEVSWNSMISG---YIHNELLPKAMN 547
             +     W +++S    Y + EL   A N
Sbjct: 644 PMKPTPAVWVALLSACRVYANVELGEYAAN 673



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 202/472 (42%), Gaps = 69/472 (14%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP---------------- 47
            K  H   L+ G   DVF+ N ++++Y + G +  A+K+F+ M                 
Sbjct: 250 GKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQ 309

Query: 48  -------------------DRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYA 88
                              + N V+W+ +++GY  +G+  EA  +F++M   G   N   
Sbjct: 310 IGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVT 369

Query: 89  LGSVLRACQECGPSGFKFGMQVHC------LVLKSNQTFDGL-VSNVLIAMYGSCLESTD 141
           L S+L  C   G      G + HC      L L  N   D L V N LI MY  C +S  
Sbjct: 370 LVSLLSGCALAGT--LLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKC-KSPK 426

Query: 142 CARRIFEEIETRD--LISWNSIISVYSQRGDTISVFKLFSRM-QREGFRYSLKPNEYTFG 198
            AR +F+ I  +D  +++W  +I   +Q G+     +LFS+M Q + F   + PN +T  
Sbjct: 427 AARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNF---VMPNAFTIS 483

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSD-LYVGSALVSGFARLGNFYYARKIFEQM 257
             + A   + L      +QI A V +    S  L+V + L+  +++ G+   AR +F+ M
Sbjct: 484 CALMAC--ARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNM 541

Query: 258 IQKNVVSMNGLMEG---RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC---GTIDDSR 311
            Q+N VS   LM G     +G+E            +V  G   V +   C   G +D   
Sbjct: 542 HQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGI 601

Query: 312 SVFR-----FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
           + F      F +   +  +  M+  L + G  +EA+     +R   +  +    ++ LS+
Sbjct: 602 NYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAME---LIRGMPMKPTPAVWVALLSA 658

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           C     + LG+    + L+L   +D S +  L ++YA+A       ++ +LM
Sbjct: 659 CRVYANVELGEYAANQLLELESGNDGSYT-LLSNIYANARCWKDVARIRYLM 709


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 255/662 (38%), Positives = 384/662 (58%), Gaps = 7/662 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+ VH  L   G+         L NMYAKC    D+R VF  M  +D V+WN +++G  +
Sbjct: 78  GRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYAR 137

Query: 335 NGCYEEAIMNFCAMRRD-GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           NG    A+     M+ + G    + +L+S L +CA+   +   ++ H   ++ GL+  V+
Sbjct: 138 NGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVN 197

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V+ A+L  Y   G +     VF  MP  + VSWN++I  +A +     EA+  +  M   
Sbjct: 198 VATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN-GDSREALALFNRMVEE 256

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G     V+ +  L A         G +VH  +++  + +  ++ NAL++ Y KC  +D  
Sbjct: 257 GVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLA 316

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
             +F  + +RR +VSWN+MI G   N     A+ L   M     + D FT  +V+ A A 
Sbjct: 317 SHVFDEL-DRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALAD 375

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           ++   +   +H   +R  L+ DV + +AL+DMY+KCGR++ A   F+    R+V +WN+M
Sbjct: 376 ISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAM 435

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I GY  HG G  A+ LF +MK  G +P+  TF+ VLSACSHAGLVDEG ++F SM + YG
Sbjct: 436 IHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYG 495

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           L P +E +  MVDLLGRAG+LD+   FI KMP+ P   ++  +LGAC     +  EL  +
Sbjct: 496 LEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLH--KNVELAEE 553

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
           +A  +FE+ PQ  V +VLLAN+YA+   W+DVA+ R AM++  ++K  G S + +K+ +H
Sbjct: 554 SAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIH 613

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
            F +G  +H +   IY +L +L ++++  GYVP T  ++ D+E + K  L++ HSEK+A+
Sbjct: 614 TFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTD-SIHDVEDDVKAQLLNTHSEKLAI 672

Query: 874 AFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           AF L R +    I+I KNLRVC DCH+A K IS + GREI++RD  RFHHF DGKCSCGD
Sbjct: 673 AFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGD 732

Query: 933 YW 934
           YW
Sbjct: 733 YW 734



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 172/332 (51%), Gaps = 3/332 (0%)

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A+  F AM   G      +  S L  CA+ G +  G+ +H +    G+DS+   + AL +
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR-RAGWSPNG 459
           +YA     +   +VF  MP  D+V+WN+++  +A    L   A++  + M+   G  P+ 
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYA-RNGLARMAMEMVVRMQEEEGERPDS 161

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           +T +++L A ++        + HA  I+  +     +  A+L  Y KCG++     +F  
Sbjct: 162 ITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDW 221

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           M   ++ VSWN+MI GY  N    +A+ L   M++ G  +   +    L AC  +  L+ 
Sbjct: 222 MPT-KNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE 280

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           GM VH   VR  L+ +V + +AL+ MYSKC R+D AS  FD +  R   SWN+MI G A+
Sbjct: 281 GMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQ 340

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
           +G  + A+ LF++M+L+   PD  T V V+ A
Sbjct: 341 NGCSEDAVRLFTRMQLENVKPDSFTLVSVIPA 372



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 223/494 (45%), Gaps = 53/494 (10%)

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
           A   F  M  AG         S+L+ C   G      G  VH  +       + L +  L
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARG--DLATGRAVHAQLAARGIDSEALAATAL 100

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
             MY  C    D ARR+F+ +  RD ++WN++++ Y++ G      ++  RMQ E     
Sbjct: 101 ANMYAKCRRPAD-ARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGE-- 157

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
            +P+  T  S++ A  ++    +       A+  ++GL   + V +A++  + + G+   
Sbjct: 158 -RPDSITLVSVLPACANARALAACREAHAFAI--RSGLEELVNVATAILDAYCKCGDIRA 214

Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRK----------------------------------- 274
           AR +F+ M  KN VS N +++G  +                                   
Sbjct: 215 ARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGE 274

Query: 275 ------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
                 G  VH  L+R GL   V+V N L+ MY+KC  +D +  VF  +  +  VSWN M
Sbjct: 275 LGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAM 334

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           I G  QNGC E+A+  F  M+ + +   +F+L+S + + A +   +  + IHG  ++L L
Sbjct: 335 ILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHL 394

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           D DV V  AL+ +YA  G ++    +F    E   ++WN++I  +  S      AV+ + 
Sbjct: 395 DQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYG-SHGFGKAAVELFE 453

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGK 506
           +M+  G  PN  TF+++L+A S   +   G +     +K +   E  +E+   ++   G+
Sbjct: 454 EMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTS-MKEDYGLEPGMEHYGTMVDLLGR 512

Query: 507 CGEMDDCEKIFARM 520
            G++D+      +M
Sbjct: 513 AGKLDEAWAFIQKM 526



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 168/348 (48%), Gaps = 26/348 (7%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   ++ G    V +   +++ Y + GD+ +A  +FD MP +NSVSW  ++ GY   G S
Sbjct: 184 HAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDS 243

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSG-FKFGMQVHCLVLKSNQTFDGLVS 126
            EA  +F  MV  G  +      SVL A Q CG  G    GM+VH L+++     +  V 
Sbjct: 244 REALALFNRMVEEGVDVTDV---SVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI MY  C +  D A  +F+E++ R  +SWN++I   +Q G +    +LF+RMQ E  
Sbjct: 301 NALITMYSKC-KRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLE-- 357

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
             ++KP+ +T  S+I A     +S     + I     +  L  D+YV +AL+  +A+ G 
Sbjct: 358 --NVKPDSFTLVSVIPALAD--ISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGR 413

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVG-----NGLVNMY 301
              AR +F    +++V++ N ++ G   G    G        +M ++G        +++ 
Sbjct: 414 VNIARILFNSARERHVITWNAMIHG--YGSHGFGKAAVELFEEMKSIGIVPNETTFLSVL 471

Query: 302 AKC---GTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA 341
           + C   G +D+ R  F  M     +      + TM+  L + G  +EA
Sbjct: 472 SACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEA 519



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 205/473 (43%), Gaps = 55/473 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H Q+   G   +      L N+Y +    A A ++FD MP R+ V+W  +V+GY   
Sbjct: 79  RAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARN 138

Query: 65  GMSNEACKMFKEMV-RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           G++  A +M   M    G   +   L SVL AC            + H   ++S      
Sbjct: 139 GLARMAMEMVVRMQEEEGERPDSITLVSVLPACANA--RALAACREAHAFAIRSGLEELV 196

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V+  ++  Y  C +    AR +F+ + T++ +SWN++I  Y+Q GD+     LF+RM  
Sbjct: 197 NVATAILDAYCKCGD-IRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVE 255

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           EG   +   +     +L        L     + ++L  +   GL S++ V +AL++ +++
Sbjct: 256 EGVDVT---DVSVLAALQACGELGCLDEGMRVHELLVRI---GLDSNVSVMNALITMYSK 309

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG-------------------------------- 271
                 A  +F+++ ++  VS N ++ G                                
Sbjct: 310 CKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSV 369

Query: 272 ---------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                      + + +HGY IR  L   V V   L++MYAKCG ++ +R +F     +  
Sbjct: 370 IPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHV 429

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           ++WN MI G   +G  + A+  F  M+  G++ +  + +S LS+C+  G +  G++ +  
Sbjct: 430 ITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE-YFT 488

Query: 383 GLK--LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
            +K   GL+  +     ++ L   AG L         MP    +S + +++GA
Sbjct: 489 SMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGA 541



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 25/208 (12%)

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
           LP A+     M   G      TF ++L  CA+   L  G  VHA      ++ + +  +A
Sbjct: 40  LPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATA 99

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK-LDGPLP 660
           L +MY+KC R   A R FD MPVR+  +WN++++GYAR+G    A+ +  +M+  +G  P
Sbjct: 100 LANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERP 159

Query: 661 DHVTFVGVLSAC-----------SHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           D +T V VL AC           +HA  +  G +   +++            + ++D   
Sbjct: 160 DSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVA------------TAILDAYC 207

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVL 737
           + G++       + MP T NS+ W  ++
Sbjct: 208 KCGDIRAARVVFDWMP-TKNSVSWNAMI 234



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 48/97 (49%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H   ++     DV++   LI++Y + G +  A  LF+   +R+ ++W  ++ GY  
Sbjct: 382 ARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGS 441

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G    A ++F+EM   G + N     SVL AC   G
Sbjct: 442 HGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAG 478


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 306/984 (31%), Positives = 493/984 (50%), Gaps = 67/984 (6%)

Query: 2    KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
            ++ K  H   +  GF  D  +   LI++Y++      A  LF  +P ++ VSW  ++SGY
Sbjct: 324  EEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGY 383

Query: 62   THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
               GM+ ++  +F+ M+  G   +  A+  +L A  E G   F+  + +H  V++S    
Sbjct: 384  AQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGI--FQQALCLHGYVVRSGFNS 441

Query: 122  DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
            +  V   LI +Y  C    D A ++F+ +  RD++ W+S+I+ Y   G      ++F +M
Sbjct: 442  NVFVGASLIELYSKCGSLGD-AVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQM 500

Query: 182  QR-------------------------EGFR--------YSLKPNEYTFGSLITAAYSSV 208
             +                         EG +        Y L+P+   FG ++      +
Sbjct: 501  VKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMV-----DL 555

Query: 209  LSGSYLLQQILAMVKKAGLLSDLYVGSALVS----------GFARLGNFYYARKIFE--Q 256
            L     L + + ++ +  + +  +V  AL+           G A   N ++         
Sbjct: 556  LGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYY 615

Query: 257  MIQKNVVSMNG----LMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
            ++  N+ +++G    + E R + KE  G     G   MV V  G+ +  A      DS+ 
Sbjct: 616  ILLSNIYAVDGKWDNVAELRTRIKE-RGLKKMFGQ-SMVEVRGGVHSFLASDRFHPDSQK 673

Query: 313  VFRFMIGKDS-VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
            ++  +   ++ +     I  LD       A++ F   +R     S +  I +     ++ 
Sbjct: 674  IYELLRKLEAQMGKEVYIPDLDFLLHDTGAVLQF--WQRIKATESKYKTIGSAPGTDTIS 731

Query: 372  WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
                 ++ H +    GL  D  +      +Y     +     VF  +P      WN +I 
Sbjct: 732  CFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIR 791

Query: 432  AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA 491
             FA     +S +++ Y  M   G  P+   F   L + +  S  + G  +H  ++    +
Sbjct: 792  GFATDGRFLS-SLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCS 850

Query: 492  NETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWF 551
            N+  ++ AL+  Y KCG+++    +F +M+  RD VSW SMISGY HN    + +     
Sbjct: 851  NDLFVDAALVDMYAKCGDIEAARLVFDKMA-VRDLVSWTSMISGYAHNGYNSETLGFFDL 909

Query: 552  MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR 611
            M   G   +  +  +VL AC ++  L +G   H+  ++   EFD+++ +A++DMYSKCG 
Sbjct: 910  MRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGS 969

Query: 612  IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
            +D A   FD    +++  W++MI+ Y  HGHG KA+ LF QM   G  P HVTF  VLSA
Sbjct: 970  LDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSA 1029

Query: 672  CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
            CSH+GL++EG  +F+ M++ + +  +L  ++CMVDLLGRAG+L +  + I  MP+ P++ 
Sbjct: 1030 CSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDAS 1089

Query: 732  IWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKA 791
            IW ++LGAC   N    +L  K A+ LF ++P +A  +VLL+N+YA+  +W +V K RK 
Sbjct: 1090 IWGSLLGACRIHN--NLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKM 1147

Query: 792  MKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFA 851
            M      K  G S V   + VH F  GD SHP+ + +Y KL+EL   M+  GYVP T F 
Sbjct: 1148 MARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFV 1207

Query: 852  LFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGR 910
            L D+E E+KE  +SYHSE++A+AF L   S    +RI KNLR+CGDCH+A K ISKIV R
Sbjct: 1208 LHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNR 1267

Query: 911  EIVLRDSNRFHHFNDGKCSCGDYW 934
             I++RD +RFH F DG CSCGDYW
Sbjct: 1268 VILVRDMHRFHRFEDGVCSCGDYW 1291



 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 232/689 (33%), Positives = 366/689 (53%), Gaps = 57/689 (8%)

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--R 272
           + Q+ + V K G+L D +  + L S +A+  +   ARK+F++    NV   N  +    R
Sbjct: 20  VSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCR 79

Query: 273 RK----------------------------------------GKEVHGYL-----IRSGL 287
            K                                        GK +HG+      I S +
Sbjct: 80  EKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDM 139

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
           F    VG+ LV +Y+KCG + ++  VF      D+V W +M++G  QN   EEA+  F  
Sbjct: 140 F----VGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQ 195

Query: 348 M-RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
           M   D ++    +L+S +S+CA L  +  G  +HG  ++   D D+ + N+LL+LYA  G
Sbjct: 196 MVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTG 255

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
                  +F  MPE D +SW+++I  +A++EA  +EA+  + +M    + PN VT ++ L
Sbjct: 256 CEKIAANLFSKMPEKDVISWSTMIACYANNEA-ANEALNLFHEMIEKRFEPNSVTVVSAL 314

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
            A +     + G ++H   +      + ++  AL+  Y KC   D+   +F R+  ++D 
Sbjct: 315 QACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLP-KKDV 373

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           VSW +++SGY  N +  K+M +   M+  G + D      +L+A + +   ++ + +H  
Sbjct: 374 VSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGY 433

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            VR+    +V +G++L+++YSKCG +  A + F  M VR+V  W+SMI+ Y  HG G +A
Sbjct: 434 VVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEA 493

Query: 647 LTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
           L +F QM  +  + P++VTF+ +LSACSHAGLV+EG K F  M   Y L P  E F  MV
Sbjct: 494 LEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMV 553

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN 765
           DLLGR G+L K  + IN+MPI     +W  +LGAC R +    E+G  AA  LF ++P +
Sbjct: 554 DLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGAC-RIH-HNIEMGEAAAKNLFWLDPSH 611

Query: 766 AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
           A  Y+LL+N+YA  GKW++VA+ R  +KE  +KK  G S V ++ GVH F+A D  HP+ 
Sbjct: 612 AGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDS 671

Query: 826 DLIYEKLKELNQKMRDAGYVPQTKFALFD 854
             IYE L++L  +M    Y+P   F L D
Sbjct: 672 QKIYELLRKLEAQMGKEVYIPDLDFLLHD 700



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 243/517 (47%), Gaps = 57/517 (11%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R   ++H  + ++G+         L ++YAKC ++  +R VF      +   WN+ +   
Sbjct: 18  RSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSY 77

Query: 333 DQNGCYEEAIMNFCAMR-RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG-LDS 390
            +   +EE +  F  M    G    NF++   L +CA L  + LG+ IHG   K   + S
Sbjct: 78  CREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGS 137

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           D+ V +AL+ LY+  G +   LKVF      D V W S++  +  +     EA+  +  M
Sbjct: 138 DMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNND-PEEALALFSQM 196

Query: 451 RRAGWSP-NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
                   + VT +++++A +     K G  VH  VI+     +  + N+LL+ Y K G 
Sbjct: 197 VMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTG- 255

Query: 510 MDDCEKI----FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
              CEKI    F++M E+ D +SW++MI+ Y +NE   +A+NL   M+++    +  T  
Sbjct: 256 ---CEKIAANLFSKMPEK-DVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVV 311

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           + L ACA    LE G ++H   V    E D  + +AL+DMY KC   D A   F  +P +
Sbjct: 312 SALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKK 371

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA-----------CSH 674
           +V SW +++SGYA++G   K++ +F  M  DG  PD V  V +L+A           C H
Sbjct: 372 DVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLH 431

Query: 675 AGLVDEGF------------------------KHFKSMSQVYGLIPQLEQFSCMV---DL 707
             +V  GF                        K FK M     ++  +  +S M+    +
Sbjct: 432 GYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGM-----IVRDVVIWSSMIAAYGI 486

Query: 708 LGRAGE-LDKIEEFINKMPITPNSLIWRTVLGACCRA 743
            GR GE L+  ++ +    + PN++ + ++L AC  A
Sbjct: 487 HGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHA 523



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 144/596 (24%), Positives = 268/596 (44%), Gaps = 62/596 (10%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H Q+ K G  +D F    L ++Y +   L +A K+FDE P  N   W   +  Y  +  
Sbjct: 23  LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82

Query: 67  SNEACKMFKEMV-RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT-FDGL 124
             E  ++F  M+  AG   + + +   L+AC   G    + G  +H    K+++   D  
Sbjct: 83  WEETLRLFHLMICTAGEAPDNFTIPIALKAC--AGLRMLELGKVIHGFAKKNDEIGSDMF 140

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V + L+ +Y  C +  + A ++FEE +  D + W S+++ Y Q  D      LFS+M   
Sbjct: 141 VGSALVELYSKCGQMGE-ALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMV-- 197

Query: 185 GFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
                +  +  T  S+++A     +V +GS     +  +V +     DL + ++L++ +A
Sbjct: 198 -MMDCVVLDPVTLVSVVSACAQLLNVKAGSC----VHGLVIRREFDGDLPLVNSLLNLYA 252

Query: 243 RLGNFYYARKIFEQMIQKNVVS--------------------MNGLMEGR---------- 272
           + G    A  +F +M +K+V+S                     + ++E R          
Sbjct: 253 KTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVS 312

Query: 273 -----------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                       +GK++H   +  G     +V   L++MY KC   D++  +F+ +  KD
Sbjct: 313 ALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKD 372

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            VSW  ++SG  QNG   +++  F  M  DG+     +++  L++ + LG       +HG
Sbjct: 373 VVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHG 432

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             ++ G +S+V V  +L+ LY+  G L   +K+F  M   D V W+S+I A+        
Sbjct: 433 YVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYG-IHGRGG 491

Query: 442 EAVKYYLDM-RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENA 499
           EA++ +  M + +   PN VTF++IL+A S   + + G ++  +++  Y +  ++     
Sbjct: 492 EALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGI 551

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL---LPKAMNLVWF 551
           ++   G+ G++     I  RM        W +++    IH+ +      A NL W 
Sbjct: 552 MVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWL 607



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 149/310 (48%), Gaps = 29/310 (9%)

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           G+   Q+H+QV K  + ++T     L S Y KC  +    K+F         + WNS + 
Sbjct: 17  GRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHL-WNSTLR 75

Query: 535 GYIHNELLPKAMNLVWFMM-QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC-L 592
            Y   +   + + L   M+   G+  D+FT    L ACA +  LE G  +H    +   +
Sbjct: 76  SYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEI 135

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
             D+ +GSALV++YSKCG++  A + F+     +   W SM++GY ++   ++AL LFSQ
Sbjct: 136 GSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQ 195

Query: 653 M-KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ------LEQFSCMV 705
           M  +D  + D VT V V+SAC+          + K+ S V+GL+ +      L   + ++
Sbjct: 196 MVMMDCVVLDPVTLVSVVSACAQ-------LLNVKAGSCVHGLVIRREFDGDLPLVNSLL 248

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM---- 761
           +L  + G         +KMP   + + W T++   C AN    E   +A N+  EM    
Sbjct: 249 NLYAKTGCEKIAANLFSKMP-EKDVISWSTMIA--CYAN---NEAANEALNLFHEMIEKR 302

Query: 762 -EPQNAVNYV 770
            EP N+V  V
Sbjct: 303 FEP-NSVTVV 311



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 139/265 (52%), Gaps = 15/265 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K     H  +++  F  D+ L N+L+N+Y + G    A+ LF +MP+++ +SW+ +++ Y
Sbjct: 223 KAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACY 282

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
            +   +NEA  +F EM+   F  N   + S L+AC        + G ++H + +      
Sbjct: 283 ANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAV--SRNLEEGKKIHKIAVWKGFEL 340

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  VS  LI MY  C    D A  +F+ +  +D++SW +++S Y+Q G       +F  M
Sbjct: 341 DFSVSTALIDMYMKC-SCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNM 399

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAM---VKKAGLLSDLYVGSALV 238
             +G    ++P+      ++ A  SS L    + QQ L +   V ++G  S+++VG++L+
Sbjct: 400 LSDG----IQPDAVAVVKILAA--SSELG---IFQQALCLHGYVVRSGFNSNVFVGASLI 450

Query: 239 SGFARLGNFYYARKIFEQMIQKNVV 263
             +++ G+   A K+F+ MI ++VV
Sbjct: 451 ELYSKCGSLGDAVKLFKGMIVRDVV 475


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 244/576 (42%), Positives = 350/576 (60%), Gaps = 6/576 (1%)

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           ++S L +CA+ G + LG+ +HG G+K  +    +  N LL +YA  G L   + VF LM 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
               V+W S+I A+A  E L  EA++ + +M R G SP+  T   +L A +     + G 
Sbjct: 61  VRTVVTWTSLIAAYA-REGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGK 119

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
            VH  + + ++ +   + NAL+  Y KCG M+D   +F  M   +D +SWN+MI GY  N
Sbjct: 120 DVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMP-VKDIISWNTMIGGYSKN 178

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
            L  +A++L   M+    + D  T A +L ACAS+A+L+RG EVH   +R     D  + 
Sbjct: 179 SLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVA 237

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           +ALVDMY KCG    A   FD++P +++ +W  MI+GY  HG G+ A+T F++M+  G  
Sbjct: 238 NALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIE 297

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           PD V+F+ +L ACSH+GL+DEG++ F  M     + P+LE ++C+VDLL R+G+L    +
Sbjct: 298 PDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYK 357

Query: 720 FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASG 779
           FI  MPI P++ IW  +L   CR +    +L  K A  +FE+EP+N   YVLLAN YA  
Sbjct: 358 FIKSMPIEPDATIWGALLSG-CRIH-HDVKLAEKVAEHVFELEPENTGYYVLLANTYAEA 415

Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
            KWE+V K R+ +    +KK  GCSW+ +K  VH+F+AG+ SHP+   I   LK L  KM
Sbjct: 416 EKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKM 475

Query: 840 RDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCH 898
           ++ GY P+T++AL + +   KE  +  HSEK+A+AF +L       IR+ KNLRVCGDCH
Sbjct: 476 KEEGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCH 535

Query: 899 SAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
              KFISK +GREIVLRDSNRFHHF DG C C  +W
Sbjct: 536 EMAKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 187/372 (50%), Gaps = 13/372 (3%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+ VHG  +++ +       N L++MYAKCG +D +  VF  M  +  V+W ++I+   +
Sbjct: 17  GRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAR 76

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G  +EAI  F  M R+G+    F++ + L +CA  G +  G+ +H    +  + S++ V
Sbjct: 77  EGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFV 136

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            NAL+ +YA  G +     VF  MP  D +SWN++IG ++ + +L +EA+  + DM    
Sbjct: 137 CNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKN-SLPNEALSLFGDMVLE- 194

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             P+G T   IL A +S +    G +VH  +++    ++  + NAL+  Y KCG +    
Sbjct: 195 MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCG-VPVLA 253

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           ++   M   +D ++W  MI+GY  +     A+     M Q G   D  +F ++L AC+  
Sbjct: 254 RLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHS 313

Query: 575 ATLERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVY 628
             L+ G          C V+  LE    I    VD+ ++ G++  A +F   MP+  +  
Sbjct: 314 GLLDEGWRFFNVMQDECNVKPKLEHYACI----VDLLARSGKLAMAYKFIKSMPIEPDAT 369

Query: 629 SWNSMISGYARH 640
            W +++SG   H
Sbjct: 370 IWGALLSGCRIH 381



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 174/384 (45%), Gaps = 55/384 (14%)

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           S+L+AC  CG      G  VH   +K+   +     N L+ MY  C    D A  +F+ +
Sbjct: 3   SILQACANCG--DVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKC-GVLDGAILVFDLM 59

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI--TAAYSSV 208
             R +++W S+I+ Y++ G +    +LF  M REG    + P+ +T  +++   A   S+
Sbjct: 60  SVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREG----VSPDIFTITTVLHACACNGSL 115

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
            +G    + +   +++  + S+++V +AL+  +A+ G+   A  +F +M  K+++S N +
Sbjct: 116 ENG----KDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTM 171

Query: 269 MEGRRK----------------------------------------GKEVHGYLIRSGLF 288
           + G  K                                        GKEVHG+++R+G F
Sbjct: 172 IGGYSKNSLPNEALSLFGDMVLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFF 231

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
               V N LV+MY KCG    +R +F  +  KD ++W  MI+G   +G    AI  F  M
Sbjct: 232 SDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEM 291

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL-KLGLDSDVSVSNALLSLYADAGY 407
           R+ G+     S IS L +C+  G +  G +       +  +   +     ++ L A +G 
Sbjct: 292 RQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGK 351

Query: 408 LSRCLKVFFLMP-EHDQVSWNSVI 430
           L+   K    MP E D   W +++
Sbjct: 352 LAMAYKFIKSMPIEPDATIWGALL 375



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 129/254 (50%), Gaps = 10/254 (3%)

Query: 18  YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM 77
           +    CNTL+++Y + G L  A  +FD M  R  V+W  +++ Y  +G+S+EA ++F EM
Sbjct: 31  WKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEM 90

Query: 78  VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
            R G   + + + +VL AC  C  S  + G  VH  + +++   +  V N L+ MY  C 
Sbjct: 91  DREGVSPDIFTITTVLHACA-CNGS-LENGKDVHNYIRENDMQSNIFVCNALMDMYAKCG 148

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
              D A  +F E+  +D+ISWN++I  YS+         LF  M  E     +KP+  T 
Sbjct: 149 SMED-ANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE-----MKPDGTTL 202

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
             ++ A  S  L+     +++   + + G  SD  V +ALV  + + G    AR +F+ +
Sbjct: 203 ACILPACAS--LASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMI 260

Query: 258 IQKNVVSMNGLMEG 271
             K++++   ++ G
Sbjct: 261 PTKDLITWTVMIAG 274



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 161/339 (47%), Gaps = 18/339 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ K  H  I ++    ++F+CN L+++Y + G +  A+ +F EMP ++ +SW  ++ GY
Sbjct: 116 ENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGY 175

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +   + NEA  +F +MV      +   L  +L AC     +    G +VH  +L++    
Sbjct: 176 SKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACASL--ASLDRGKEVHGHILRNGFFS 232

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V+N L+ MY  C      AR +F+ I T+DLI+W  +I+ Y   G   +    F+ M
Sbjct: 233 DQQVANALVDMYVKCGVPV-LARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEM 291

Query: 182 QREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           ++ G    ++P+E +F S++ A ++S +L   +    +  M  +  +   L   + +V  
Sbjct: 292 RQAG----IEPDEVSFISILYACSHSGLLDEGWRFFNV--MQDECNVKPKLEHYACIVDL 345

Query: 241 FARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG-- 296
            AR G    A K  + M I+ +      L+ G R   +V     +   +F++     G  
Sbjct: 346 LARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYY 405

Query: 297 --LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
             L N YA+    ++ + + R  IG+  +  N   S ++
Sbjct: 406 VLLANTYAEAEKWEEVKKL-RQKIGRRGLKKNPGCSWIE 443


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 266/786 (33%), Positives = 441/786 (56%), Gaps = 51/786 (6%)

Query: 193 NEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK 252
           + +TF  ++ A    V+   +   +I  ++ K G  S ++V ++LVS +A+  +   ARK
Sbjct: 9   DSFTFPCVLKAC--GVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARK 66

Query: 253 IFEQMIQKN-VVSMNGLMEG---------------------------------------- 271
           +F++M ++N VVS N ++                                          
Sbjct: 67  LFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSS 126

Query: 272 -RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
            ++ G E+H  +++S     V V N LV M+ + G +  +  +F  +  KD+++WN+MI+
Sbjct: 127 FKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIA 186

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           G  QNG Y EA+  FC ++   L     SLIS L++   LG+++ G++IH   +K  LDS
Sbjct: 187 GFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDS 246

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           ++ + N L+ +Y+    ++    VF  M   D +SW +VI A+A +    +EA+K    +
Sbjct: 247 NLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCH-TEALKLLRKV 305

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
           +  G   + +   + L A S         +VH   +K  ++ +  ++N ++  Y  CG +
Sbjct: 306 QTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNI 364

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
           +   ++F  + + +D VSW SMIS Y+HN L  +A+ + + M +     D  T  ++LSA
Sbjct: 365 NYATRMFESI-KCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSA 423

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
            AS++ L +G E+H    R     +    ++LVDMY+ CG ++ A + F     +++  W
Sbjct: 424 AASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLW 483

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
            +MI+ Y  HG G  A+ LFS M+    +PDH+TF+ +L ACSH+GL++EG +  ++M  
Sbjct: 484 TTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKC 543

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
            Y L P  E ++C+VDLLGRA  L++   F+  M I P + +W   LGA CR +  K +L
Sbjct: 544 KYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGA-CRIHSNK-KL 601

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
           G  AA  L +++P +  +YVL++N++A+ G+W+DV + R  MK   +KK  GCSW+ + +
Sbjct: 602 GEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGN 661

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKM-RDAGYVPQTKFALFDLEPESKEDLVSYHSE 869
            VH F+  D+SHPE   IY+KL ++ +K+ ++ GYVPQTK  L ++  E K  ++  HSE
Sbjct: 662 KVHTFLVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSE 721

Query: 870 KIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKC 928
           ++A+A+ L   S+  PIRI KNLRVC DCH+  K +SK   RE+++RD++RFHHF DG C
Sbjct: 722 RLAIAYGLMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVC 781

Query: 929 SCGDYW 934
           SCGD+W
Sbjct: 782 SCGDFW 787



 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 171/626 (27%), Positives = 291/626 (46%), Gaps = 60/626 (9%)

Query: 81  GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST 140
           G   + +    VL+AC          G ++H L++K        V+N L++MY  C +  
Sbjct: 5   GVPFDSFTFPCVLKACGVV--EDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDIL 62

Query: 141 DCARRIFEEIETR-DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
             AR++F+ +  R D++SWNSIIS YS  G  +    LF  MQ+ G    +  N YT  +
Sbjct: 63  G-ARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAG----VGANTYTLVA 117

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
            + A   S  S   L  +I A + K+  + D+YV +ALV+   R G   YA +IF+++ +
Sbjct: 118 ALQACEDS--SFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDE 175

Query: 260 KNVVSMNGLMEGRRK-----------------------------------------GKEV 278
           K+ ++ N ++ G  +                                         GKE+
Sbjct: 176 KDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEI 235

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H Y +++ L   + +GN L++MY+KC  +  +  VF  MI KD +SW T+I+   QN C+
Sbjct: 236 HAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCH 295

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
            EA+     ++  G+      + STL +C+ L  +   +++HG  LK GL SD+ + N +
Sbjct: 296 TEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMI 354

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           + +YAD G ++   ++F  +   D VSW S+I  +  +  L +EA+  +  M+     P+
Sbjct: 355 IDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHN-GLANEALGVFYLMKETSVEPD 413

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
            +T ++IL+AA+S S    G ++H  + +     E +  N+L+  Y  CG +++  K+F 
Sbjct: 414 SITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFI 473

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
             +  +  V W +MI+ Y  +     A+ L   M  +    DH TF  +L AC+    + 
Sbjct: 474 -CTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLIN 532

Query: 579 RG---MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            G   +E   C  +  LE      + LVD+  +   ++ A  F   M +           
Sbjct: 533 EGKRLLETMKCKYQ--LEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFL 590

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPD 661
           G  R  H +K L   +  KL    PD
Sbjct: 591 GACRI-HSNKKLGEIAAQKLLDLDPD 615



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 162/510 (31%), Positives = 259/510 (50%), Gaps = 61/510 (11%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSV-SWACIVSGYTHKG 65
            H  I+K G+   VF+ N+L+++Y +  D+  A KLFD M +RN V SW  I+S Y+  G
Sbjct: 32  IHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLNG 91

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
              EA  +F+EM +AG   N Y L + L+AC++   S  K GM++H  +LKSNQ  D  V
Sbjct: 92  QCMEALGLFREMQKAGVGANTYTLVAALQACED--SSFKKLGMEIHAAILKSNQVLDVYV 149

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           +N L+AM+         A RIF+E++ +D I+WNS+I+ ++Q G      + F  +Q   
Sbjct: 150 ANALVAMHVR-FGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDA- 207

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSG--SYLL--QQILAMVKKAGLLSDLYVGSALVSGF 241
              +LKP+E +  S++ A      SG   YLL  ++I A   K  L S+L +G+ L+  +
Sbjct: 208 ---NLKPDEVSLISILAA------SGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMY 258

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRKG--------- 275
           ++     YA  +F++MI K+++S   ++                   + KG         
Sbjct: 259 SKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIG 318

Query: 276 ---------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                          KEVHGY ++ GL D++ + N ++++YA CG I+ +  +F  +  K
Sbjct: 319 STLLACSGLRCLSHAKEVHGYTLKRGLSDLM-MQNMIIDVYADCGNINYATRMFESIKCK 377

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D VSW +MIS    NG   EA+  F  M+   +   + +L+S LS+ ASL  +  G++IH
Sbjct: 378 DVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIH 437

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
           G   + G   + S  N+L+ +YA  G L    KVF        V W ++I A+       
Sbjct: 438 GFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYG-MHGRG 496

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
             AV+ +  M      P+ +TF+ +L A S
Sbjct: 497 KAAVELFSIMEDQKLIPDHITFLALLYACS 526



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 180/327 (55%), Gaps = 3/327 (0%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           MR  G+   +F+    L +C  +  I  G +IHG  +K G DS V V+N+L+S+YA    
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 408 LSRCLKVFFLMPE-HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
           +    K+F  M E +D VSWNS+I A++ +   + EA+  + +M++AG   N  T +  L
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCM-EALGLFREMQKAGVGANTYTLVAAL 119

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
            A    S  KLG ++HA ++K N   +  + NAL++ + + G+M    +IF  + E +D 
Sbjct: 120 QACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDE-KDN 178

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           ++WNSMI+G+  N L  +A+     +     + D  +  ++L+A   +  L  G E+HA 
Sbjct: 179 ITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAY 238

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            ++  L+ ++ IG+ L+DMYSKC  + YA   FD M  +++ SW ++I+ YA++    +A
Sbjct: 239 AMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEA 298

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACS 673
           L L  +++  G   D +     L ACS
Sbjct: 299 LKLLRKVQTKGMDVDTMMIGSTLLACS 325



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 151/301 (50%), Gaps = 2/301 (0%)

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           MR  G   +  TF  +L A         G ++H  +IK    +   + N+L+S Y KC +
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           +    K+F RM+ER D VSWNS+IS Y  N    +A+ L   M + G   + +T    L 
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           AC   +  + GME+HA  +++    DV + +ALV M+ + G++ YA+R FD +  ++  +
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           WNSMI+G+ ++G  ++AL  F  ++     PD V+ + +L+A    G +  G K   + +
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNG-KEIHAYA 239

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
               L   L   + ++D+  +   +       +KM I  + + W TV+ A  + NC    
Sbjct: 240 MKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKM-INKDLISWTTVIAAYAQNNCHTEA 298

Query: 750 L 750
           L
Sbjct: 299 L 299



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 135/278 (48%), Gaps = 15/278 (5%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H   +K+    ++ + NTLI++Y +   +A A  +FD+M +++ +SW  +++ Y 
Sbjct: 231 NGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYA 290

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                 EA K+ +++   G  ++   +GS L AC   G        +VH   LK   + D
Sbjct: 291 QNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACS--GLRCLSHAKEVHGYTLKRGLS-D 347

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            ++ N++I +Y  C  + + A R+FE I+ +D++SW S+IS Y   G       +F  M+
Sbjct: 348 LMMQNMIIDVYADC-GNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMK 406

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
                 S++P+  T  S+++AA S         ++I   + + G + +    ++LV  +A
Sbjct: 407 ET----SVEPDSITLVSILSAAASLSALNKG--KEIHGFIFRKGFMLEGSTVNSLVDMYA 460

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGL-----MEGRRKG 275
             G+   A K+F     K++V    +     M GR K 
Sbjct: 461 CCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKA 498



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 10/217 (4%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H   LK G + D+ + N +I+VY   G++  A+++F+ +  ++ VSW  ++S Y H
Sbjct: 333 AKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVH 391

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G++NEA  +F  M       +   L S+L A      S    G ++H  + +     +G
Sbjct: 392 NGLANEALGVFYLMKETSVEPDSITLVSILSAAAS--LSALNKGKEIHGFIFRKGFMLEG 449

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
              N L+ MY +C  S + A ++F    ++ L+ W ++I+ Y   G   +  +LFS M+ 
Sbjct: 450 STVNSLVDMY-ACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMED 508

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQI 218
           +     L P+  TF +L+ A   S L   G  LL+ +
Sbjct: 509 Q----KLIPDHITFLALLYACSHSGLINEGKRLLETM 541


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 284/847 (33%), Positives = 440/847 (51%), Gaps = 89/847 (10%)

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +  N+++  Y      +D A  +F+ +  RD+ SWN+++S Y Q    +   + F  M R
Sbjct: 72  ITHNIMMNGYAKQGSLSD-AEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G      PN +TF  ++ +     L    L  Q+L +  K     D  V +ALV  F R
Sbjct: 131 SGDSL---PNAFTFCCVMKSC--GALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
            G   +A ++F Q+ +  +   N ++ G                             YAK
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAG-----------------------------YAK 216

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
              ID +   F  M  +D VSWN MI+ L Q+G   EA+     M R G+   + +  S+
Sbjct: 217 LYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSS 276

Query: 364 LSSCA---SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           L++CA   SLGW   G+Q+H + ++     D  V++AL+ LYA  G      +VF  + +
Sbjct: 277 LTACARLFSLGW---GKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQD 333

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            + VSW  +IG     E   S++V+ +  MR    + +      +++   +     LG Q
Sbjct: 334 RNSVSWTVLIGGSLQYECF-SKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQ 392

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER----------------- 523
           +H+  +K        + N+L+S Y KCG++ + E +F+ MSER                 
Sbjct: 393 LHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGN 452

Query: 524 -------------RDEVSWNSMISGYIHNELLPKAMNLVWFMM-QRGQRLDHFTFATVLS 569
                        R+ ++WN+M+  YI +      + +   M+ Q+    D  T+ T+  
Sbjct: 453 IIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFR 512

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
            CA +   + G ++    V+A L  +V + +A + MYSKCGRI  A + FDL+  ++V S
Sbjct: 513 GCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVS 572

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           WN+MI+GY++HG G +A   F  M   G  PD++++V VLS CSH+GLV EG  +F  M+
Sbjct: 573 WNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMT 632

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKT 748
           +V+G+ P LE FSCMVDLLGRAG L + ++ I+KMP+ P + +W  +L AC    N    
Sbjct: 633 RVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGN---D 689

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
           EL   AA  +FE++  ++ +Y+LLA +Y+  GK +D A+ RK M++  +KK  G SW+ +
Sbjct: 690 ELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEV 749

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
           ++ VHVF A D SHP+   I  K+ EL +K+   GYV           P S+     +HS
Sbjct: 750 ENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVRTE-------SPRSE----IHHS 798

Query: 869 EKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGK 927
           EK+AVAF +++  + +PI IMKNLR+CGDCH+  K IS +  RE V+RD  RFHHF  G 
Sbjct: 799 EKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGS 858

Query: 928 CSCGDYW 934
           CSCGDYW
Sbjct: 859 CSCGDYW 865



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 150/624 (24%), Positives = 264/624 (42%), Gaps = 118/624 (18%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +V   N ++N Y + G L+ A +LFD MP R+  SW  ++SGY       +  + F  M 
Sbjct: 70  NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129

Query: 79  RAG-FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC- 136
           R+G  L N +    V+++C   G    +   Q+  L  K +   D  V   L+ M+  C 
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCR--ELAPQLLGLFWKFDFWGDPDVETALVDMFVRCG 187

Query: 137 -----------------------------LESTDCARRIFEEIETRDLISWNSIISVYSQ 167
                                        L   D A   FE++  RD++SWN +I+  SQ
Sbjct: 188 YVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQ 247

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
            G       L   M R+G R  L    YT      A   S+  G    +Q+ A V ++  
Sbjct: 248 SGRVREALGLVVEMHRKGVR--LDSTTYTSSLTACARLFSLGWG----KQLHAKVIRSLP 301

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------- 274
             D YV SAL+  +A+ G+F  A+++F  +  +N VS   L+ G  +             
Sbjct: 302 QIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQ 361

Query: 275 ----------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
                                       G+++H   ++SG    + V N L+++YAKCG 
Sbjct: 362 MRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGD 421

Query: 307 IDDSRSVFRFMIGKDSVSWNTMISGLD-------------------------------QN 335
           + ++  VF  M  +D VSW +MI+                                  Q+
Sbjct: 422 LQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQH 481

Query: 336 GCYEEAIMNFCAMRRDGLMSSNF-SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           G  E+ +  + AM     ++ ++ + ++    CA +G   LG QI G  +K GL  +VSV
Sbjct: 482 GAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSV 541

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           +NA +++Y+  G +S   K+F L+   D VSWN++I  ++    +  +A K + DM   G
Sbjct: 542 ANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYS-QHGMGKQAAKTFDDMLSKG 600

Query: 455 WSPNGVTFINILAAASSFSM---GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             P+ ++++ +L+  S   +   GKL   +  +V  + ++      + ++   G+ G + 
Sbjct: 601 AKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRV--HGISPGLEHFSCMVDLLGRAGHLT 658

Query: 512 DCEKIFARMSERRDEVSWNSMISG 535
           + + +  +M  +     W +++S 
Sbjct: 659 EAKDLIDKMPMKPTAEVWGALLSA 682



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 215/487 (44%), Gaps = 72/487 (14%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF------------------ 316
            + +HG L+  GL   V + N L++ Y  CG + D+R + R                   
Sbjct: 23  ARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYA 82

Query: 317 --------------MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG-LMSSNFSLI 361
                         M  +D  SWNT++SG  Q   + + +  F +M R G  + + F+  
Sbjct: 83  KQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFC 142

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY-------------- 407
             + SC +LG   L  Q+ G   K     D  V  AL+ ++   GY              
Sbjct: 143 CVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERP 202

Query: 408 -----------------LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
                            +   ++ F  M E D VSWN +I A + S   V EA+   ++M
Sbjct: 203 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQS-GRVREALGLVVEM 261

Query: 451 RRAGWSPNGVTFINILAA-ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
            R G   +  T+ + L A A  FS+G  G Q+HA+VI+     +  + +AL+  Y KCG 
Sbjct: 262 HRKGVRLDSTTYTSSLTACARLFSLG-WGKQLHAKVIRSLPQIDPYVASALIELYAKCGS 320

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
             + +++F  + + R+ VSW  +I G +  E   K++ L   M      +D F  AT++S
Sbjct: 321 FKEAKRVFNSLQD-RNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLIS 379

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
            C +   L  G ++H+  +++     +V+ ++L+ +Y+KCG +  A   F  M  R++ S
Sbjct: 380 GCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVS 439

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           W SMI+ Y++ G+  KA   F  M       + +T+  +L A    G  ++G K + +M 
Sbjct: 440 WTSMITAYSQIGNIIKAREFFDGM----ATRNAITWNAMLGAYIQHGAEEDGLKMYSAML 495

Query: 690 QVYGLIP 696
               + P
Sbjct: 496 SQKDVTP 502



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 203/436 (46%), Gaps = 51/436 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H ++++     D ++ + LI +Y + G    A ++F+ + DRNSVSW  ++ G    
Sbjct: 290 KQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQY 349

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
              +++ ++F +M      ++++AL +++  C          G Q+H L LKS      +
Sbjct: 350 ECFSKSVELFNQMRAELMAIDQFALATLISGC--FNRMDLCLGRQLHSLCLKSGHNRAIV 407

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           VSN LI++Y  C +  + A  +F  +  RD++SW S+I+ YSQ G+ I   + F  M   
Sbjct: 408 VSNSLISLYAKCGDLQN-AEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATR 466

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                   N  T+ +++  AY    +    L+   AM+ +  +  D      L  G A +
Sbjct: 467 --------NAITWNAML-GAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADI 517

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
           G    A K+ +Q+I                     G+ +++GL   V+V N  + MY+KC
Sbjct: 518 G----ANKLGDQII---------------------GHTVKAGLILNVSVANAAITMYSKC 552

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G I +++ +F  + GKD VSWN MI+G  Q+G  ++A   F  M   G      S ++ L
Sbjct: 553 GRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVL 612

Query: 365 SSCASLGWIMLGQ-------QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
           S C+  G +  G+       ++H  G+  GL+      + ++ L   AG+L+    +   
Sbjct: 613 SGCSHSGLVQEGKLYFDMMTRVH--GISPGLEH----FSCMVDLLGRAGHLTEAKDLIDK 666

Query: 418 MPEHDQVS-WNSVIGA 432
           MP       W +++ A
Sbjct: 667 MPMKPTAEVWGALLSA 682



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 137/331 (41%), Gaps = 71/331 (21%)

Query: 481 VHAQVIKYNVANETTIENALLSCYGKC--------------------------------G 508
           +H +++   +A+   ++N LL  Y  C                                G
Sbjct: 26  LHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQG 85

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH-FTFATV 567
            + D E++F RM  RRD  SWN+++SGY         +     M + G  L + FTF  V
Sbjct: 86  SLSDAEELFDRM-PRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCV 144

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR---------- 617
           + +C ++   E   ++     +     D  + +ALVDM+ +CG +D+ASR          
Sbjct: 145 MKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTI 204

Query: 618 ---------------------FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
                                +F+ M  R+V SWN MI+  ++ G   +AL L  +M   
Sbjct: 205 FCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRK 264

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF--SCMVDLLGRAGEL 714
           G   D  T+   L+AC  A L   G+   +  ++V   +PQ++ +  S +++L  + G  
Sbjct: 265 GVRLDSTTYTSSLTAC--ARLFSLGWGK-QLHAKVIRSLPQIDPYVASALIELYAKCGSF 321

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANC 745
            + +   N +    NS+ W  ++G   +  C
Sbjct: 322 KEAKRVFNSLQ-DRNSVSWTVLIGGSLQYEC 351


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 263/708 (37%), Positives = 391/708 (55%), Gaps = 70/708 (9%)

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLF 288
           +D ++ + L++ +A+ G   +ARK+F++M Q++  S N ++                   
Sbjct: 56  NDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAML------------------- 96

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
                     ++YAK G ++D R +F  M  +DSVS+NT+ISG   NG    A+  F  M
Sbjct: 97  ----------SLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRM 146

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           +++GL  + ++ +S L++C  L  +  G+QIHG  +   L  +V V NAL  LYA  G +
Sbjct: 147 QKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEI 206

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
            +  ++F  M   + V+WN +I  +  +     + +  + +M+ +   P+ VT  ++L A
Sbjct: 207 DQARRLFDRMVIRNVVTWNLMISGYLKNRQ-PEKCIDLFHEMQVSNLKPDQVTASSVLGA 265

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
                                              Y + G +D+  K+F  + E+ DEV 
Sbjct: 266 -----------------------------------YIQAGYIDEARKVFGEIREK-DEVC 289

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           W  MI G   N     A+ L   M+    R D +T ++V+S+CA +A+L  G  VH    
Sbjct: 290 WTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAF 349

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
              +  D+++ SALVDMY KCG    A   F  M  RNV SWNSMI GYA +G   +AL+
Sbjct: 350 LMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALS 409

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           L+  M  +   PD VTFVGVLSAC HAGLV+EG ++F SMS  +GL P  + ++CMV+L 
Sbjct: 410 LYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLF 469

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
           GR+G +DK  + I+ M   PNSLIW TVL  C        + G  AA  L E+ P NAV 
Sbjct: 470 GRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKG--DIKHGEMAARCLIELNPFNAVP 527

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
           Y++L+NMYA+ G+W+DVA  R  MK   VKK +  SW+ + + VH FVA D +HP+  +I
Sbjct: 528 YIMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKII 587

Query: 829 YEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK--LPIR 886
           + +L  L +K+++AG+ P T   L D   + K + ++YHSEK+A+A+ L +      PIR
Sbjct: 588 HVQLNRLIRKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIR 647

Query: 887 IMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           I+KN+R C DCH   KF+S I  R ++LRDSNRFHHF +GKCSC DYW
Sbjct: 648 IIKNIRTCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 229/468 (48%), Gaps = 57/468 (12%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR 168
            +H  + K N TF   + N L+ +Y    E +  AR++F+E+  RD  SWN+++S+Y++ 
Sbjct: 47  HMHLHLFKPNDTF---IHNRLLNLYAKSGEISH-ARKLFDEMTQRDNFSWNAMLSLYAKS 102

Query: 169 G---------------DTIS----------------VFKLFSRMQREGFRYSLKPNEYTF 197
           G               D++S                   +F RMQ+EG    LKP EYT 
Sbjct: 103 GLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEG----LKPTEYTH 158

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            S++ A   + L      +QI   +    L  +++V +AL   +AR G    AR++F++M
Sbjct: 159 VSVLNAC--TQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRM 216

Query: 258 IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN---------GLVNMYAKCGTID 308
           + +NVV+ N ++ G  K ++    +    LF  + V N          ++  Y + G ID
Sbjct: 217 VIRNVVTWNLMISGYLKNRQPEKCI---DLFHEMQVSNLKPDQVTASSVLGAYIQAGYID 273

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
           ++R VF  +  KD V W  MI G  QNG  E+A++ F  M  +      +++ S +SSCA
Sbjct: 274 EARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCA 333

Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
            L  +  GQ +HG+   +G++ D+ VS+AL+ +Y   G       +F  M   + VSWNS
Sbjct: 334 KLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNS 393

Query: 429 VIGAFA-DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           +IG +A + + L  EA+  Y +M      P+ VTF+ +L+A     + + G +    +  
Sbjct: 394 MIGGYALNGQDL--EALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSD 451

Query: 488 YNVANETTIENA-LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            +    T    A +++ +G+ G MD    + + MS+  + + W +++S
Sbjct: 452 QHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLS 499



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 121/469 (25%), Positives = 211/469 (44%), Gaps = 63/469 (13%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEM-------------------- 46
            HL + K     D F+ N L+N+Y + G+++ A KLFDEM                    
Sbjct: 48  MHLHLFKPN---DTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGL 104

Query: 47  -----------PDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRA 95
                      P R+SVS+  ++SG+   G    A  +F  M + G     Y   SVL A
Sbjct: 105 VEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNA 164

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDL 155
           C +      + G Q+H  ++  N   +  V N L  +Y  C E  D ARR+F+ +  R++
Sbjct: 165 CTQL--LDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGE-IDQARRLFDRMVIRNV 221

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL- 214
           ++WN +IS Y +         LF  MQ      +LKP++ T  S++ A     +   Y+ 
Sbjct: 222 VTWNLMISGYLKNRQPEKCIDLFHEMQVS----NLKPDQVTASSVLGA----YIQAGYID 273

Query: 215 -LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN----------VV 263
             +++   +++     D    + ++ G A+ G    A  +F +M+ +N          VV
Sbjct: 274 EARKVFGEIRE----KDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVV 329

Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
           S    +     G+ VHG     G+ D + V + LV+MY KCG   D+ ++F  M  ++ V
Sbjct: 330 SSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVV 389

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH-GE 382
           SWN+MI G   NG   EA+  +  M  + L   + + +  LS+C   G +  G++     
Sbjct: 390 SWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSM 449

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI 430
             + GL+        +++L+  +G++ + + +   M  E + + W +V+
Sbjct: 450 SDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVL 498



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 122/245 (49%), Gaps = 33/245 (13%)

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER------------ 523
           +L   +H  + K    N+T I N LL+ Y K GE+    K+F  M++R            
Sbjct: 43  RLKSHMHLHLFK---PNDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLY 99

Query: 524 ------------------RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
                             RD VS+N++ISG+  N     A+ +   M + G +   +T  
Sbjct: 100 AKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHV 159

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           +VL+AC  +  L RG ++H   +   L  +V + +AL D+Y++CG ID A R FD M +R
Sbjct: 160 SVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIR 219

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
           NV +WN MISGY ++   +K + LF +M++    PD VT   VL A   AG +DE  K F
Sbjct: 220 NVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVF 279

Query: 686 KSMSQ 690
             + +
Sbjct: 280 GEIRE 284



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 158/415 (38%), Gaps = 109/415 (26%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H +I+      +VF+CN L ++Y R G++  A +LFD M  RN V+W  ++SGY
Sbjct: 172 RRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGY 231

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                  +   +F EM  +    ++    SVL A  + G                     
Sbjct: 232 LKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAG--------------------- 270

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
                              D AR++F EI  +D + W  +I   +Q G       LFS M
Sbjct: 271 -----------------YIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEM 313

Query: 182 QREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
             E  R    P+ YT  S+++  A  +S+  G  +  +   M    G+  DL V SALV 
Sbjct: 314 LLENAR----PDGYTISSVVSSCAKLASLYHGQVVHGKAFLM----GVNDDLLVSSALVD 365

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVN 299
            + + G    A  IF  M  +NVVS N ++ G                            
Sbjct: 366 MYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGG---------------------------- 397

Query: 300 MYAKCGTIDDSRSVFRFMIGK----DSVSWNTMISGLDQNGCYEEAIMNFCAMR------ 349
            YA  G   ++ S++  M+ +    DSV++  ++S     G  EE    FC+M       
Sbjct: 398 -YALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLE 456

Query: 350 --------------RDGLMSSNFSLISTLSS-CASLGW-------IMLGQQIHGE 382
                         R G M     LIS++S    SL W       +M G   HGE
Sbjct: 457 PTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGE 511



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 7/106 (6%)

Query: 1   SKDAKLFHLQILKHGFAY------DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSW 54
           +K A L+H Q++ HG A+      D+ + + L+++Y + G    A  +F  M  RN VSW
Sbjct: 333 AKLASLYHGQVV-HGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSW 391

Query: 55  ACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
             ++ GY   G   EA  +++ M+      +      VL AC   G
Sbjct: 392 NSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAG 437


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 292/856 (34%), Positives = 443/856 (51%), Gaps = 101/856 (11%)

Query: 106 FGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE---STDCARRIFEEIETRDLISWNSII 162
           F  Q  C + K +     L + +   ++ SC+    S    R I  ++       +N+ I
Sbjct: 24  FSSQNGCFIHKPS-----LKTKIFSPIFSSCIPIRISATPTRTIDHQV-----TDYNAKI 73

Query: 163 SVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILA 220
             + Q GD  +  +L    Q+            T+GS++   A   S   G    +++ +
Sbjct: 74  LHFCQLGDLENAMELICMCQKSELETK------TYGSVLQLCAGLKSFTDG----KKVHS 123

Query: 221 MVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHG 280
           ++K   +  D  +G  LVS +A  G+    R++F+ M +KNV                  
Sbjct: 124 IIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNV------------------ 165

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK-------------------- 320
           YL            N +V+ YAK G   +S  +F+ M+ K                    
Sbjct: 166 YL-----------WNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDR 214

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D +SWN+MISG   NG  E  +  +  M   G+     ++IS L  CA+ G + LG+ +H
Sbjct: 215 DVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVH 274

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
              +K   +  ++ SN LL +Y+  G L   L+VF  M E + VSW S+I  +   +   
Sbjct: 275 SLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT-RDGRS 333

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
             A+K    M + G   + V   +IL A +       G  VH  +   N+ +   + NAL
Sbjct: 334 DGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNAL 393

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD 560
           +  Y KCG M+    +F+ M   +D +SWN+MI      EL P                D
Sbjct: 394 MDMYAKCGSMEAANSVFSTMV-VKDIISWNTMIG-----ELKP----------------D 431

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
             T A VL ACAS++ LERG E+H   +R     D  + +ALVD+Y KCG +  A   FD
Sbjct: 432 SRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFD 491

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
           ++P +++ SW  MI+GY  HG+G++A+  F++M+  G  PD V+F+ +L ACSH+GL+++
Sbjct: 492 MIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQ 551

Query: 681 GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC 740
           G++ F  M   + + P+LE ++CMVDLL R G L K  EF+  +PI P++ IW  +L  C
Sbjct: 552 GWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGC 611

Query: 741 CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKE 800
              N    EL  K A  +FE+EP+N   YVLLAN+YA   KWE+V + R+ + +  ++K 
Sbjct: 612 --RNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKN 669

Query: 801 AGCSWVTMKDGVHVFVAGDE-SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES 859
            GCSW+ +K  V++FV+G+  SHP    I   LK++ +KM++ G+ P+TK+AL + +   
Sbjct: 670 PGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQ 729

Query: 860 KEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSN 918
           KE  +  HSEK+A+AF +LT   +  IR+ KNLRVCGDCH   KF+SK   REIVLRDSN
Sbjct: 730 KEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSN 789

Query: 919 RFHHFNDGKCSCGDYW 934
           RFHHF DG CSC  +W
Sbjct: 790 RFHHFKDGYCSCRGFW 805



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 197/399 (49%), Gaps = 51/399 (12%)

Query: 19  DVFLCNTLINVYVRVGDLA--------------------SASKLFDEMPDRNSVSWACIV 58
           +V+L N +++ Y ++GD                      SA +LFD++ DR+ +SW  ++
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMI 223

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
           SGY   G++     ++K+M+  G  ++   + SVL  C   G      G  VH L +KS+
Sbjct: 224 SGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGT--LSLGKAVHSLAIKSS 281

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
                  SN L+ MY  C +  D A R+FE++  R+++SW S+I+ Y++ G +    KL 
Sbjct: 282 FERRINFSNTLLDMYSKCGD-LDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLL 340

Query: 179 SRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
            +M++EG    +K +     S++ A A S  L      + +   +K   + S+L+V +AL
Sbjct: 341 QQMEKEG----VKLDVVAITSILHACARSGSLDNG---KDVHDYIKANNMESNLFVCNAL 393

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGL--------------------MEGRRKGKE 277
           +  +A+ G+   A  +F  M+ K+++S N +                    +    +GKE
Sbjct: 394 MDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKE 453

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +HGY++R+G      V N LV++Y KCG +  +R +F  +  KD VSW  MI+G   +G 
Sbjct: 454 IHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGY 513

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
             EAI  F  MR  G+     S IS L +C+  G +  G
Sbjct: 514 GNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 130/540 (24%), Positives = 231/540 (42%), Gaps = 114/540 (21%)

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           L     GSVL+ C   G   F  G +VH ++  ++   DG +   L++ Y +C +  +  
Sbjct: 97  LETKTYGSVLQLCA--GLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKE-G 153

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGD---TISVFKLFSRMQREGFRYS---------LK 191
           RR+F+ +E +++  WN ++S Y++ GD   +I +FK+      EG R             
Sbjct: 154 RRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCD 213

Query: 192 PNEYTFGSLITAAYSSVLS----GSYLLQQILAMVKKAGLLSDLYVGSA----------- 236
            +  ++ S+I+   S+ L+    G Y     L +      +  + VG A           
Sbjct: 214 RDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAV 273

Query: 237 ------------------LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---- 274
                             L+  +++ G+   A ++FE+M ++NVVS   ++ G  +    
Sbjct: 274 HSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRS 333

Query: 275 -------------------------------------GKEVHGYLIRSGLFDMVAVGNGL 297
                                                GK+VH Y+  + +   + V N L
Sbjct: 334 DGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNAL 393

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           ++MYAKCG+++ + SVF  M+ KD +SWNTMI  L  +                     +
Sbjct: 394 MDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPD---------------------S 432

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
            ++   L +CASL  +  G++IHG  L+ G  SD  V+NAL+ LY   G L     +F +
Sbjct: 433 RTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM 492

Query: 418 MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
           +P  D VSW  +I  +       +EA+  + +MR AG  P+ V+FI+IL A S   + + 
Sbjct: 493 IPSKDLVSWTVMIAGYG-MHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQ 551

Query: 478 GHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           G +    ++K +   E  +E+   ++    + G +    +    +    D   W +++ G
Sbjct: 552 GWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCG 610



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 133/278 (47%), Gaps = 34/278 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H   +K  F   +   NTL+++Y + GDL  A ++F++M +RN VSW  +++GYT 
Sbjct: 270 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 329

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G S+ A K+ ++M + G  L+  A+ S+L AC   G      G  VH  +  +N   + 
Sbjct: 330 DGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSG--SLDNGKDVHDYIKANNMESNL 387

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V N L+ MY  C  S + A  +F  +  +D+ISWN++I                     
Sbjct: 388 FVCNALMDMYAKC-GSMEAANSVFSTMVVKDIISWNTMIG-------------------- 426

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
                 LKP+  T   ++ A  S  LS     ++I   + + G  SD +V +ALV  + +
Sbjct: 427 -----ELKPDSRTMACVLPACAS--LSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY 281
            G    AR +F+ +  K++VS   ++ G      +HGY
Sbjct: 480 CGVLGLARLLFDMIPSKDLVSWTVMIAGY----GMHGY 513



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 147/344 (42%), Gaps = 44/344 (12%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H  I  +    ++F+CN L+++Y + G + +A+ +F  M  ++ +SW  ++ G  
Sbjct: 370 NGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI-GEL 428

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                  AC                    VL AC     S  + G ++H  +L++  + D
Sbjct: 429 KPDSRTMAC--------------------VLPACASL--SALERGKEIHGYILRNGYSSD 466

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V+N L+ +Y  C      AR +F+ I ++DL+SW  +I+ Y   G        F+ M+
Sbjct: 467 RHVANALVDLYVKC-GVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMR 525

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ----ILAMVKKAGLLSDLYVGSALV 238
             G    ++P+E +F S++ A      S S LL+Q       M     +   L   + +V
Sbjct: 526 DAG----IEPDEVSFISILYAC-----SHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMV 576

Query: 239 SGFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG 296
              +R GN   A +  E + I  +      L+ G R   ++     +   +F++     G
Sbjct: 577 DLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTG 636

Query: 297 ----LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
               L N+YA+    ++ + + R  IGK  +  N   S ++  G
Sbjct: 637 YYVLLANIYAEAEKWEEVKRL-REKIGKQGLRKNPGCSWIEIKG 679


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 258/638 (40%), Positives = 383/638 (60%), Gaps = 18/638 (2%)

Query: 311 RSVFRFMIGKDSV-SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           RS+F   + K SV SWN++I+   ++G   +A+  F +MR+  L  +  +   T+ SC+S
Sbjct: 39  RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           L  +  G+QIH +    G  SD+ V++AL+ +Y+  GYL+   K+F  +PE + VSW S+
Sbjct: 99  LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158

Query: 430 IGAFADSEALVSEAV---KYYLDMRRAGWSP--------NGVTFINILAAASSFSMGKLG 478
           I  +  +E    EAV   K +L +    +          + V    +++A +   +  + 
Sbjct: 159 ISGYVQNER-AREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVT 217

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
             VH   +K        + N L+  Y KCGE+    K+F  M E  D  SWNS+I+ Y  
Sbjct: 218 ECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGM-EETDVCSWNSLIAVYAQ 276

Query: 539 NELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
           N L  +A +L   M++RG+ R +  T + VL ACA    L+ G  +H   V+  LE ++V
Sbjct: 277 NGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLV 336

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           +G+++VDMY KCGR++ A + FD +  +NV SW  M++GY  HGHG +A+ +F +M   G
Sbjct: 337 VGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCG 396

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
             P+++TFV VL+ACSHAGL+ EG+  F  M   + + P +E +SCMVDLLGRAG L + 
Sbjct: 397 IKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEA 456

Query: 718 EEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYA 777
              I +M + P+ ++W ++LGA CR + +  ELG  +A  LF+++P N   YVLL+N+YA
Sbjct: 457 YGLIQEMKVKPDFIVWGSLLGA-CRIH-KNVELGEISARKLFKLDPSNCGYYVLLSNIYA 514

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
             G+W+DV + R  MK   + K  G S V  K  VHVF+ GD+ HP+ + IYE L ELN 
Sbjct: 515 DAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNV 574

Query: 838 KMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGD 896
           K+++ GY+P     L+D++ E K  ++  HSEK+AVAF ++       I+I+KNLR+CGD
Sbjct: 575 KLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGD 634

Query: 897 CHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CH A K ISKIV REIV+RDS RFHHF DG CSCGDYW
Sbjct: 635 CHFAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 222/469 (47%), Gaps = 34/469 (7%)

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------GKEV 278
           + +Y  +++++ FAR G+   A   F  M + ++           K          GK++
Sbjct: 49  TSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQI 108

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H      G    + V + L++MY+KCG ++D+R +F  +  ++ VSW +MISG  QN   
Sbjct: 109 HQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERA 168

Query: 339 EEAIM-----------NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
            EA+            ++  +   G+   +  L   +S+CA +    + + +HG  +K G
Sbjct: 169 REAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKG 228

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
            +  ++V N L+  YA  G +S   KVF  M E D  SWNS+I  +A +  L  EA   +
Sbjct: 229 FEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQN-GLSVEAFSLF 287

Query: 448 LDM-RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
            DM +R     N VT   +L A +     ++G  +H QV+K  + +   +  +++  Y K
Sbjct: 288 SDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCK 347

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
           CG ++   K F R+ +R++  SW  M++GY  +    +AM + + M++ G + ++ TF +
Sbjct: 348 CGRVEMARKAFDRL-KRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVS 406

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLM 622
           VL+AC+    L+ G   H      C EFDV  G    S +VD+  + G +  A      M
Sbjct: 407 VLAACSHAGLLKEGW--HWFNKMKC-EFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEM 463

Query: 623 PVR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
            V+ +   W S++   A   H +  L   S  KL    P +  +  +LS
Sbjct: 464 KVKPDFIVWGSLLG--ACRIHKNVELGEISARKLFKLDPSNCGYYVLLS 510



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 228/500 (45%), Gaps = 65/500 (13%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H Q    G+  D+F+ + LI++Y + G L  A KLFDE+P+RN VSW  ++SGY  
Sbjct: 105 GKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQ 164

Query: 64  KGMSNEACKMFKEMV-----------RAGFLLNRYALGSVLRACQE-CGPSGFKFGMQVH 111
              + EA  +FKE +             G  ++   LG V+ AC   C  S  +    VH
Sbjct: 165 NERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTEC---VH 221

Query: 112 CLVLKSNQTFDGL--VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
            L +K  + F+G   V N L+  Y  C E    +R++F+ +E  D+ SWNS+I+VY+Q G
Sbjct: 222 GLAVK--KGFEGCLAVGNTLMDAYAKCGE-ISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLS-GSYLLQQILAMVKKAGL 227
            ++  F LFS M + G    ++ N  T  +++ A A+S  L  G  +  Q++ M     L
Sbjct: 279 LSVEAFSLFSDMVKRG---EVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKM----EL 331

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGL 287
             +L VG+++V  + + G    ARK F+++ +KNV S   ++ G   G   HG       
Sbjct: 332 EDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGY--GMHGHGKEAMKVF 389

Query: 288 FDMVAVG-----NGLVNMYAKC---GTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQ 334
           ++M+  G        V++ A C   G + +    F  M  +  V      ++ M+  L +
Sbjct: 390 YEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGR 449

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLI-STLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            G  +EA      M+    +  +F +  S L +C     + LG+    +  KL   S+  
Sbjct: 450 AGYLKEAYGLIQEMK----VKPDFIVWGSLLGACRIHKNVELGEISARKLFKLD-PSNCG 504

Query: 394 VSNALLSLYADAGYLSRCLKVFFLM--------PEHDQVSWNSVIGAF--ADSEALVSEA 443
               L ++YADAG      ++  LM        P +  V     +  F   D E    E 
Sbjct: 505 YYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEK 564

Query: 444 VKYYLD-----MRRAGWSPN 458
           +  YLD     ++  G+ PN
Sbjct: 565 IYEYLDELNVKLQEVGYMPN 584



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 107/449 (23%), Positives = 191/449 (42%), Gaps = 59/449 (13%)

Query: 37  ASASKLFDEMPDRNSV-SWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRA 95
           A+   +F +  D+ SV SW  I++ +   G S +A   F  M +     NR      +++
Sbjct: 36  ANLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKS 95

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDL 155
           C          G Q+H          D  V++ LI MY  C    D AR++F+EI  R++
Sbjct: 96  CSSL--YDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLND-ARKLFDEIPERNV 152

Query: 156 ISWNSIISVYSQRG---DTISVFKLFSRMQREGF----RYSLKPNEYTFGSLITAAYSSV 208
           +SW S+IS Y Q     + + +FK F  +    +       +  +    G +I+A     
Sbjct: 153 VSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVC 212

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
           +    + + +  +  K G    L VG+ L+  +A+ G    +RK+F+ M + +V S N L
Sbjct: 213 VKS--VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSL 270

Query: 269 ME------------------------------------------GRRKGKEVHGYLIRSG 286
           +                                             + GK +H  +++  
Sbjct: 271 IAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKME 330

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
           L D + VG  +V+MY KCG ++ +R  F  +  K+  SW  M++G   +G  +EA+  F 
Sbjct: 331 LEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFY 390

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN--ALLSLYAD 404
            M R G+  +  + +S L++C+  G +  G     + +K   D +  + +   ++ L   
Sbjct: 391 EMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNK-MKCEFDVEPGIEHYSCMVDLLGR 449

Query: 405 AGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           AGYL     +   M  + D + W S++GA
Sbjct: 450 AGYLKEAYGLIQEMKVKPDFIVWGSLLGA 478


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 240/576 (41%), Positives = 363/576 (63%), Gaps = 7/576 (1%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S L+ C S   I  GQ++H   +K   +  V +   L+ LY     L    +V   MPE 
Sbjct: 15  SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 74

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           + VSW ++I  ++      SEA+  +++M  +G +PN  TF  +L + +S S  +LG Q+
Sbjct: 75  NVVSWTAMISGYSQ-RGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQI 133

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H+ VIK +  +   + ++LL  Y K G++ +  ++F  + ER D VS  ++ISGY    L
Sbjct: 134 HSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPER-DVVSCTAIISGYAQLGL 192

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +A++L   + + G R ++ T+A+VL+A + +A L+ G +VH+  +RA L F VV+ ++
Sbjct: 193 DEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNS 252

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-P 660
           L+DMYSKCG + Y+ R FD MP R V SWN+M+ GY++HG G +A+ LF  MK +  + P
Sbjct: 253 LIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKP 312

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSM-SQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           D VTF+ VLS CSH G+ D G + F  M +Q  G  P++E + C+VDL GRAG +++  E
Sbjct: 313 DSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFE 372

Query: 720 FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASG 779
           FI KMP  P + IW ++LGAC R + +   +G   A  L E+E +NA NYV+L+N+YAS 
Sbjct: 373 FIKKMPFEPTAAIWGSLLGAC-RVH-QNVHIGEFVARRLLEIESENAGNYVILSNLYASA 430

Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
           G+W+DV   R+ MKE  V KE G SW+ +   +H F A D SHP K+ ++ K++EL+ K+
Sbjct: 431 GRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKI 490

Query: 840 RDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCH 898
           ++AGYVP+    L+D++ E KE ++  HSEK+A+AF ++      P+RI+KNLR+C DCH
Sbjct: 491 KEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCH 550

Query: 899 SAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +  KF+S++ GRE+ LRD NRFHH   G CSCGDYW
Sbjct: 551 NFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586



 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 189/372 (50%), Gaps = 6/372 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R+G+ VH ++I++     V +   L+ +Y KC  + D+R V   M  ++ VSW  MISG 
Sbjct: 27  REGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGY 86

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            Q G   EA+  F  M   G   + F+  + L+SC S     LG+QIH   +K   +S +
Sbjct: 87  SQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHI 146

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V ++LL +YA AG +    +VF  +PE D VS  ++I  +A    L  EA+  +  ++R
Sbjct: 147 FVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQL-GLDEEALDLFRRLQR 205

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G   N VT+ ++L A S  +    G QVH+ V++  +     ++N+L+  Y KCG +  
Sbjct: 206 EGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTY 265

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSAC 571
             +IF  M E R  +SWN+M+ GY  + L  +A+ L   M +  + + D  TF  VLS C
Sbjct: 266 SRRIFDSMPE-RTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGC 324

Query: 572 ASVATLERGMEV--HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           +     +RG+E+       +   E ++     +VD++ + GR++ A  F   MP     +
Sbjct: 325 SHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAA 384

Query: 630 -WNSMISGYARH 640
            W S++     H
Sbjct: 385 IWGSLLGACRVH 396



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 184/362 (50%), Gaps = 51/362 (14%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H  ++K  +   V+L   LI +Y +   L  A ++ DEMP+RN VSW  ++SGY
Sbjct: 27  REGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGY 86

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           + +G ++EA  +F EM+ +G   N +   +VL +C     SGF+ G Q+H LV+K++   
Sbjct: 87  SQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSS--SGFQLGRQIHSLVIKTSFES 144

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V + L+ MY    +  + ARR+F+ +  RD++S  +IIS Y+Q G       LF R+
Sbjct: 145 HIFVGSSLLDMYAKAGKICE-ARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRL 203

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL---QQILAMVKKAGLLSDLYVGSALV 238
           QREG R     N  T+ S++TA     LSG   L   +Q+ + V +A L   + + ++L+
Sbjct: 204 QREGMR----SNYVTYASVLTA-----LSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLI 254

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLV 298
             +++ G+  Y+R+IF+ M ++ V+S N ++ G                           
Sbjct: 255 DMYSKCGSLTYSRRIFDSMPERTVISWNAMLVG--------------------------- 287

Query: 299 NMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAM--RRD 351
             Y+K G   ++  +F+ M     +  DSV++  ++SG    G  +  +  F  M  ++D
Sbjct: 288 --YSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKD 345

Query: 352 GL 353
           G 
Sbjct: 346 GF 347



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 155/323 (47%), Gaps = 12/323 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +  H  ++K  F   +F+ ++L+++Y + G +  A ++FD +P+R+ VS   I+SGY  
Sbjct: 130 GRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQ 189

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+  EA  +F+ + R G   N     SVL A    G +    G QVH  VL++   F  
Sbjct: 190 LGLDEEALDLFRRLQREGMRSNYVTYASVLTALS--GLAALDHGRQVHSHVLRAKLPFYV 247

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           ++ N LI MY  C  S   +RRIF+ +  R +ISWN+++  YS+ G      +LF  M+ 
Sbjct: 248 VLQNSLIDMYSKC-GSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKE 306

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           E     +KP+  TF ++++      +    L      + +K G   ++     +V  F R
Sbjct: 307 EN---KVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGR 363

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGR-RKGKEVH-GYLIRSGLFDMVAVGNG----L 297
            G    A +  ++M  +   ++ G + G  R  + VH G  +   L ++ +   G    L
Sbjct: 364 AGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVIL 423

Query: 298 VNMYAKCGTIDDSRSVFRFMIGK 320
            N+YA  G  DD R+V   M  K
Sbjct: 424 SNLYASAGRWDDVRTVRELMKEK 446



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 160/312 (51%), Gaps = 14/312 (4%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRRKGKEVHGYLIR 284
           +A++SG+++ G    A  +F +M+             V++      G + G+++H  +I+
Sbjct: 80  TAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIK 139

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
           +     + VG+ L++MYAK G I ++R VF  +  +D VS   +ISG  Q G  EEA+  
Sbjct: 140 TSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDL 199

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F  ++R+G+ S+  +  S L++ + L  +  G+Q+H   L+  L   V + N+L+ +Y+ 
Sbjct: 200 FRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSK 259

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG-WSPNGVTFI 463
            G L+   ++F  MPE   +SWN+++  ++    L  EAV+ +  M+      P+ VTF+
Sbjct: 260 CGSLTYSRRIFDSMPERTVISWNAMLVGYS-KHGLGREAVELFKLMKEENKVKPDSVTFL 318

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMS 521
            +L+  S   M   G ++  +++      E  IE+   ++  +G+ G +++  +   +M 
Sbjct: 319 AVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMP 378

Query: 522 ERRDEVSWNSMI 533
                  W S++
Sbjct: 379 FEPTAAIWGSLL 390



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 90/171 (52%), Gaps = 1/171 (0%)

Query: 555 RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
           +G  ++   + +VL+ C S   +  G  VHA  ++ C E  V + + L+ +Y+KC  +  
Sbjct: 4   QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 63

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
           A R  D MP RNV SW +MISGY++ G+  +AL LF +M + G  P+  TF  VL++C+ 
Sbjct: 64  ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 123

Query: 675 AGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
           +     G +   S+         +   S ++D+  +AG++ +     + +P
Sbjct: 124 SSGFQLG-RQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 276/730 (37%), Positives = 403/730 (55%), Gaps = 64/730 (8%)

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK- 320
           V+   G +   R G  VH  +  +GL   V + N +V MY +CG +DD+  +F  ++ + 
Sbjct: 133 VLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERK 192

Query: 321 --DSVSWNTMISGLDQNGCYEEAIM------NFCAMRRDGLMSSNFSLISTLSSCASLGW 372
             D VSWN++++   Q G    A+       N  +++   L     +L++ L +CAS+  
Sbjct: 193 IEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLK---LRPDAITLVNILPACASVFA 249

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV--- 429
           +  G+Q+HG  ++ GL  DV V NAL+S+YA    ++   KVF  + + D VSWN++   
Sbjct: 250 LQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTG 309

Query: 430 ---IGAFADSEALVS----------------------------EAVKYYLDMRRAGWSPN 458
              IG+F  + +L                              EA+  +  M+  G  PN
Sbjct: 310 YSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPN 369

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN--------ETTIENALLSCYGKCGEM 510
            VT  ++L+  +S      G Q HA VIK N+ N        +  + N L+  Y KC   
Sbjct: 370 VVTLASLLSGCASVGALLYGKQTHAYVIK-NILNLNWNDKEDDLLVLNGLIDMYAKCKSY 428

Query: 511 DDCEKIFARMSER-RDEVSWNSMISGYIHNELLPKAMNLV--WFMMQRGQRLDHFTFATV 567
                IF  +  + ++ V+W  MI GY  +     A+ L    F  +   + + FT +  
Sbjct: 429 RVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCA 488

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVV-IGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           L ACA +  L  G ++HA  +R   E +V+ +G+ L+DMYSK G ID A   FD M +RN
Sbjct: 489 LMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRN 548

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
           V SW S+++GY  HG G++AL LF QM+  G   D +TF+ VL ACSH+G+VD+G  +F 
Sbjct: 549 VVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFH 608

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANC 745
            M + +G+ P  E ++CMVDLLGRAG L++  E I  M + P +++W  +L A    AN 
Sbjct: 609 DMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHAN- 667

Query: 746 RKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSW 805
              ELG  AA+ L E+  +N  +Y LL+N+YA+  +W+DVA+ R  MK   ++K  GCSW
Sbjct: 668 --IELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSW 725

Query: 806 VTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVS 865
           +  K     F  GD SHPE + IY  L +L ++++D GYVPQT FAL D++ E K DL+ 
Sbjct: 726 IQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDEEKGDLLF 785

Query: 866 YHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFN 924
            HSEK+AVA+ +LT     PIRI KNLR+CGDCHSA  +IS I+  EIVLRDS+RFHHF 
Sbjct: 786 EHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLRDSSRFHHFK 845

Query: 925 DGKCSCGDYW 934
            G CSC  YW
Sbjct: 846 KGSCSCRSYW 855



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 186/668 (27%), Positives = 323/668 (48%), Gaps = 73/668 (10%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEM-PDRNSVSW-ACIVSG 60
           +AKL H QI  HGF  ++F  +  +  Y+  G  A A  L   + P  ++V W   ++  
Sbjct: 45  NAKLAHQQIFVHGFT-EMF--SYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRR 101

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
               G+ ++    + +M R G+L + Y    VL+AC E  PS  + G  VH +V  +   
Sbjct: 102 SVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEI-PS-LRHGASVHAIVCANGLG 159

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETR---DLISWNSIISVYSQRGDTISVFKL 177
            +  + N ++AMYG C  + D A ++F+E+  R   D++SWNSI++ Y Q G + +  ++
Sbjct: 160 SNVFICNSIVAMYGRC-GALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRI 218

Query: 178 FSRMQREGFRYSLK--PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS 235
             RM   G  YSLK  P+  T  +++ A  +SV +  +  +Q+     + GL+ D++VG+
Sbjct: 219 AFRM---GNHYSLKLRPDAITLVNILPAC-ASVFALQH-GKQVHGFSVRNGLVDDVFVGN 273

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN 295
           ALVS +A+      A K+FE + +K+VVS N ++ G                        
Sbjct: 274 ALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTG------------------------ 309

Query: 296 GLVNMYAKCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
                Y++ G+ D + S+F+ M    I  D ++W+ +I+G  Q G   EA+  F  M+  
Sbjct: 310 -----YSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLY 364

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL-------DSDVSVSNALLSLYAD 404
           GL  +  +L S LS CAS+G ++ G+Q H   +K  L       + D+ V N L+ +YA 
Sbjct: 365 GLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAK 424

Query: 405 AGYLSRCLKVFFLMPEHDQ--VSWNSVIGAFADSEALVSEAVKYYLDM--RRAGWSPNGV 460
                    +F  +   D+  V+W  +IG +A      ++A+K +  +  ++    PN  
Sbjct: 425 CKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQ-HGEANDALKLFAQIFKQKTSLKPNAF 483

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETT-IENALLSCYGKCGEMDDCEKIFAR 519
           T    L A +     +LG Q+HA  ++    +E   + N L+  Y K G++D    +F  
Sbjct: 484 TLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDN 543

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           M + R+ VSW S+++GY  +    +A++L   M + G  +D  TF  VL AC+    +++
Sbjct: 544 M-KLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQ 602

Query: 580 GMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMI 634
           GM      V+    F +  G    + +VD+  + GR++ A      M +      W +++
Sbjct: 603 GMIYFHDMVKG---FGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALL 659

Query: 635 SGYARHGH 642
           S    H +
Sbjct: 660 SASRIHAN 667



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 208/460 (45%), Gaps = 67/460 (14%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H   +++G   DVF+ N L+++Y +   +  A+K+F+ +  ++ VSW  +V+GY
Sbjct: 251 QHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGY 310

Query: 62  T-----------------------------------HKGMSNEACKMFKEMVRAGFLLNR 86
           +                                    KG   EA  +F++M   G   N 
Sbjct: 311 SQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNV 370

Query: 87  YALGSVLRACQECGPSGFKFGMQVHCLVLK-------SNQTFDGLVSNVLIAMYGSCLES 139
             L S+L  C   G     +G Q H  V+K       +++  D LV N LI MY  C +S
Sbjct: 371 VTLASLLSGCASVG--ALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKC-KS 427

Query: 140 TDCARRIFEEIETRD--LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
              AR IF+ IE +D  +++W  +I  Y+Q G+     KLF+++ ++  + SLKPN +T 
Sbjct: 428 YRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQ--KTSLKPNAFTL 485

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD-LYVGSALVSGFARLGNFYYARKIFEQ 256
              + A   + L    L +Q+ A   +    S+ LYVG+ L+  +++ G+   AR +F+ 
Sbjct: 486 SCALMAC--ARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDN 543

Query: 257 MIQKNVVSMNGLMEG---RRKGKE-VHGYLIRSGLFDMVAVGNGLVNMYA--KCGTIDDS 310
           M  +NVVS   LM G     +G+E +H +     L   V     LV +YA    G +D  
Sbjct: 544 MKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQG 603

Query: 311 RSVFR-----FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
              F      F I   +  +  M+  L + G   EA+     ++   +  +    ++ LS
Sbjct: 604 MIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAME---LIKNMSMEPTAVVWVALLS 660

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
           +      I LG+    +  +LG ++D S +  L +LYA+A
Sbjct: 661 ASRIHANIELGEYAASKLTELGAENDGSYT-LLSNLYANA 699


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/739 (34%), Positives = 391/739 (52%), Gaps = 71/739 (9%)

Query: 265 MNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
           +N       + ++ H +++++GLF+   +   L++ YA      D+  V   +   +  S
Sbjct: 22  LNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFS 81

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           ++T+I    +   +  A+  F  M   GLM  N  L S + +CA L  +   +Q+HG   
Sbjct: 82  FSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIAS 141

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA---------- 434
             G DSD  V ++L+ +Y     +    +VF  M E D VSW++++ A+A          
Sbjct: 142 VSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKR 201

Query: 435 ------------------------DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
                                   +   L SEAV  +LDM   G+ P+G T  ++L A  
Sbjct: 202 LFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVG 261

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS--------- 521
                 +G  +H  VIK  + ++  + +AL+  YGKC    +  ++F +M          
Sbjct: 262 DLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNA 321

Query: 522 -------------------ERRDE------VSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
                              + +D+      VSW SMI+    N    +A+ L   M   G
Sbjct: 322 FIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAG 381

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
            + +  T   +L AC ++A L  G   H   +R  +  DV +GSAL+DMY+KCGRI  + 
Sbjct: 382 VKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASR 441

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
             FD +P +N+  WN++I+GYA HG   +A+ +F  M+  G  PD ++F  VLSACS +G
Sbjct: 442 ICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSG 501

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
           L +EG  +F SMS  YG+  ++E ++CMV LL RAG+L++    I +MP+ P++ +W  +
Sbjct: 502 LTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGAL 561

Query: 737 LGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAE 796
           L +C   N     LG  AA  LFE+EP N  NY+LL+N+YAS G W +V + R  MK   
Sbjct: 562 LSSCRVHN--NVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKG 619

Query: 797 VKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLE 856
           ++K  GCSW+ +K+ VH+ +AGD+SHP+   I EKL +L+ +M+  GY P+  F L D+E
Sbjct: 620 LRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVE 679

Query: 857 PESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLR 915
            + KE ++  HSEK+AV F +L      P++++KNLR+CGDCH   KFIS    REI +R
Sbjct: 680 EQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVR 739

Query: 916 DSNRFHHFNDGKCSCGDYW 934
           D+NRFHHF +G CSCGDYW
Sbjct: 740 DTNRFHHFKEGACSCGDYW 758



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 137/571 (23%), Positives = 253/571 (44%), Gaps = 72/571 (12%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ILK G   D  L   L++ Y      A A+ + D +P+ N  S++ ++  ++     
Sbjct: 36  HAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQF 95

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           + A   F +M+  G + +   L S ++AC   G S  K   QVH +   S    D  V +
Sbjct: 96  HHALSTFSQMLTRGLMPDNRVLPSAVKACA--GLSALKPARQVHGIASVSGFDSDSFVQS 153

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY  C +  D A R+F+ +   D++SW+++++ Y+++G      +LFS M   G  
Sbjct: 154 SLVHMYIKCNQIRD-AHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSG-- 210

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             ++PN  ++  +I     S L    +L           +  D+++      GF   G  
Sbjct: 211 --VQPNLISWNGMIAGFNHSGLYSEAVL-----------MFLDMHL-----RGFEPDGTT 252

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC--- 304
                        +V+   G +E    G  +HGY+I+ GL     V + L++MY KC   
Sbjct: 253 I-----------SSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCT 301

Query: 305 ----------------------------GTIDDSRSVFRFMIGK----DSVSWNTMISGL 332
                                       G ++ S  +FR +  +    + VSW +MI+  
Sbjct: 302 SEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACC 361

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            QNG   EA+  F  M+  G+  ++ ++   L +C ++  +M G+  H   L+ G+ +DV
Sbjct: 362 SQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDV 421

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V +AL+ +YA  G +      F  +P  + V WN+VI  +A       EA++ +  M+R
Sbjct: 422 YVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYA-MHGKAKEAMEIFDLMQR 480

Query: 453 AGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
           +G  P+ ++F  +L+A S   + + G +  ++   KY +         +++   + G+++
Sbjct: 481 SGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLE 540

Query: 512 DCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
               +  RM    D   W +++S   +HN +
Sbjct: 541 QAYAMIRRMPVNPDACVWGALLSSCRVHNNV 571


>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 300/980 (30%), Positives = 480/980 (48%), Gaps = 98/980 (10%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H Q+ K G  +D F    L ++Y +   L +A K+FDE P  N   W   +  Y  +  
Sbjct: 23  LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82

Query: 67  SNEACKMFKEMV-RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT-FDGL 124
             E  ++F  M+  AG   + + +   L+AC   G    + G  +H    K+++   D  
Sbjct: 83  WEETLRLFHLMICTAGEAPDNFTIPIALKAC--AGLRMLELGKVIHGFAKKNDEIGSDMF 140

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V + L+ +Y  C +  + A ++FEE +  D + W S+++ Y Q  D      LFS+M   
Sbjct: 141 VGSALVELYSKCGQMGE-ALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQM--- 196

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                                                V       DL + ++L++ +A+ 
Sbjct: 197 -------------------------------------VMMDCFDGDLPLVNSLLNLYAKT 219

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLM------EGRRKGKEVHGYLIRSGLFDMVAVGNGLV 298
           G    A  +F +M +K+V+S + ++      E   +   +   +I              +
Sbjct: 220 GCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSAL 279

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
              A    +++ + + +  + KD VSW  ++SG  QNG   +++  F  M  DG+     
Sbjct: 280 QACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAV 339

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           +++  L++ + LG       +HG  ++ G +S+V V  +L+ LY+  G L   +K+F  M
Sbjct: 340 AVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGM 399

Query: 419 PEHDQVSWNSVIGAFA------------DSEALVSEAVK--YYLDMRRAGWSPNGVT--- 461
              D V W+S+I A+             D    V + +   Y + M+     P  +T   
Sbjct: 400 IVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCT 459

Query: 462 -FINILAAASSFSMGK----LGH--------------QVHAQVIKYNVANETTIENALLS 502
              +I     +F M      LGH                 + +  Y +  ++ I      
Sbjct: 460 LATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAI 519

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH- 561
            Y     +D    +F  +      + WN MI G+  +     ++ L   MM++G + D+ 
Sbjct: 520 MYVSFNRIDAASIVFEDIPNPCSFL-WNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNS 578

Query: 562 ------FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
                  +  +VL AC ++  L +G   H+  ++   EFD+++ +A++DMYSKCG +D A
Sbjct: 579 GVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLA 638

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
              FD    +++  W++MI+ Y  HGHG KA+ LF QM   G  P HVTF  VLSACSH+
Sbjct: 639 RCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHS 698

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           GL++EG  +F+ M++ + +  +L  ++CMVDLLGRAG+L +  + I  MP+ P++ IW +
Sbjct: 699 GLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGS 758

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           +LGAC   N    +L  K A+ LF ++P +A  +VLL+N+YA+  +W +V K RK M   
Sbjct: 759 LLGACRIHN--NLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARR 816

Query: 796 EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
              K  G S V   + VH F  GD SHP+ + +Y KL+EL   M+  GYVP T F L D+
Sbjct: 817 GANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDI 876

Query: 856 EPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
           E E+KE  +SYHSE++A+AF L   S    +RI KNLR+CGDCH+A K ISKIV R I++
Sbjct: 877 EEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILV 936

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RD +RFH F DG CSCGDYW
Sbjct: 937 RDMHRFHRFEDGVCSCGDYW 956



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 172/710 (24%), Positives = 292/710 (41%), Gaps = 122/710 (17%)

Query: 5   KLFHLQILKHGFAY-------DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACI 57
           ++  L  + HGFA        D+F+ + L+ +Y + G +  A K+F+E    ++V W  +
Sbjct: 117 RMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSM 176

Query: 58  VSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
           V+GY       EA  +F +MV                   +C                  
Sbjct: 177 VTGYQQNNDPEEALALFSQMVM-----------------MDC------------------ 201

Query: 118 NQTFDGLVS--NVLIAMYGSCLESTDC---ARRIFEEIETRDLISWNSIISVYSQRGDTI 172
              FDG +   N L+ +Y      T C   A  +F ++  +D+ISW+++I+ Y+      
Sbjct: 202 ---FDGDLPLVNSLLNLYAK----TGCEKIAANLFSKMPEKDVISWSTMIACYANNEAAN 254

Query: 173 SVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDL 231
               LF  M  + F    +PN  T  S + A A S  L     + +I        +  D+
Sbjct: 255 EALNLFHEMIEKRF----EPNSVTVVSALQACAVSRNLEEGKKIHKI-------AVWKDV 303

Query: 232 YVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLMEGR------RKGKEVHGY 281
               AL+SG+A+ G  Y +  +F  M    IQ + V++  ++         ++   +HGY
Sbjct: 304 VSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGY 363

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           ++RSG    V VG  L+ +Y+KCG++ D+  +F+ MI +D V W++MI+    +G   EA
Sbjct: 364 VVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEA 423

Query: 342 IMNFCAMRR--DGL-------MSSNFSLISTLSSC----------------ASLGWIMLG 376
           +  F  M +   G+       M         ++SC                A   W+   
Sbjct: 424 LEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHF 483

Query: 377 QQI------------HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +I                   GL  D  +      +Y     +     VF  +P     
Sbjct: 484 WEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSF 543

Query: 425 SWNSVI------GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
            WN +I      G F  S  L S+ ++  L    +G  PN V+ +++L A  +    + G
Sbjct: 544 LWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKG 603

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
              H+ VI+     +  +  A++  Y KCG +D    +F   +  +D V W++MI+ Y  
Sbjct: 604 EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDE-TAGKDLVCWSAMIASYGI 662

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG-MEVHACGVRACLEFDVV 597
           +    KA++L   M++ G R  H TF  VLSAC+    LE G M          +   + 
Sbjct: 663 HGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLS 722

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYARHGHGDKA 646
             + +VD+  + G++  A    + MPV    S W S++     H + D A
Sbjct: 723 NYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLA 772



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 170/670 (25%), Positives = 281/670 (41%), Gaps = 118/670 (17%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY--- 165
           Q+H  V K+    D   +  L ++Y  C  S   AR++F+E    ++  WNS +  Y   
Sbjct: 22  QLHSQVFKTGILHDTFFATKLNSLYAKC-ASLQAARKVFDETPHPNVHLWNSTLRSYCRE 80

Query: 166 SQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKA 225
            Q  +T+ +F L      E       P+ +T    + A   + L    L + I    KK 
Sbjct: 81  KQWEETLRLFHLMICTAGEA------PDNFTIPIALKAC--AGLRMLELGKVIHGFAKKN 132

Query: 226 GLL-SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE------V 278
             + SD++VGSALV  +++ G    A K+FE+  + + V    ++ G ++  +      +
Sbjct: 133 DEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALAL 192

Query: 279 HGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
              ++    FD  + + N L+N+YAK G    + ++F  M  KD +SW+TMI+    N  
Sbjct: 193 FSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEA 252

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
             EA+  F  M       ++ +++S L +CA    +  G++IH    K+ +  DV    A
Sbjct: 253 ANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIH----KIAVWKDVVSWVA 308

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           LLS YA  G   + + VF                                 +M   G  P
Sbjct: 309 LLSGYAQNGMAYKSMGVF--------------------------------RNMLSDGIQP 336

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           + V  + ILAA+S   + +    +H  V++    +   +  +L+  Y KCG + D  K+F
Sbjct: 337 DAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLF 396

Query: 518 ARMSERRDEVSWNSMISGY-IHNE-------------------------LLPK------- 544
             M   RD V W+SMI+ Y IH                           + P+       
Sbjct: 397 KGMI-VRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAI 455

Query: 545 -----AMNLVW-----FMMQRGQRLDHF--TFATVLSACASVATLERGMEVHACGVRACL 592
                A ++ W     +M    + L HF   F T     A ++       + A G    L
Sbjct: 456 TSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSK----SNIFAYG----L 507

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
           ++D  I +    MY    RID AS  F+ +P    + WN MI G+A  G    +L L+S+
Sbjct: 508 QYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSK 567

Query: 653 M-----KLD--GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
           M     K D  G +P+ V+ + VL AC + G + +G + F S     G    +   + ++
Sbjct: 568 MMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKG-EWFHSYVIQTGFEFDILVATAIM 626

Query: 706 DLLGRAGELD 715
           D+  + G LD
Sbjct: 627 DMYSKCGSLD 636



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 190/418 (45%), Gaps = 42/418 (10%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R   ++H  + ++G+         L ++YAKC ++  +R VF      +   WN+ +   
Sbjct: 18  RSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSY 77

Query: 333 DQNGCYEEAIMNFCAMR-RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG-LDS 390
            +   +EE +  F  M    G    NF++   L +CA L  + LG+ IHG   K   + S
Sbjct: 78  CREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGS 137

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           D+ V +AL+ LY+  G +   LKVF      D V W S++  +  +     EA+  +  M
Sbjct: 138 DMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNND-PEEALALFSQM 196

Query: 451 RRAGWSPNGVTFIN-ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
                    +  +N +L   +     K+   + +++ + +V + +T    +++CY     
Sbjct: 197 VMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWST----MIACYANNEA 252

Query: 510 MDDCEKIFARMSERR----------------------------------DEVSWNSMISG 535
            ++   +F  M E+R                                  D VSW +++SG
Sbjct: 253 ANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSG 312

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
           Y  N +  K+M +   M+  G + D      +L+A + +   ++ + +H   VR+    +
Sbjct: 313 YAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSN 372

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
           V +G++L+++YSKCG +  A + F  M VR+V  W+SMI+ Y  HG G +AL +F QM
Sbjct: 373 VFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQM 430



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 141/312 (45%), Gaps = 17/312 (5%)

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           G+   Q+H+QV K  + ++T     L S Y KC  +    K+F         + WNS + 
Sbjct: 17  GRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHL-WNSTLR 75

Query: 535 GYIHNELLPKAMNLVWFMM-QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC-L 592
            Y   +   + + L   M+   G+  D+FT    L ACA +  LE G  +H    +   +
Sbjct: 76  SYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEI 135

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
             D+ +GSALV++YSKCG++  A + F+     +   W SM++GY ++   ++AL LFSQ
Sbjct: 136 GSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQ 195

Query: 653 MKL----DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           M +    DG LP       +L+  +  G        F  M +   +I      +C  +  
Sbjct: 196 MVMMDCFDGDLP---LVNSLLNLYAKTGCEKIAANLFSKMPE-KDVISWSTMIACYANNE 251

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
                L+   E I K    PNS+   + L AC  A  R  E G+K   +      ++ V+
Sbjct: 252 AANEALNLFHEMIEKR-FEPNSVTVVSALQAC--AVSRNLEEGKKIHKIAVW---KDVVS 305

Query: 769 YVLLANMYASGG 780
           +V L + YA  G
Sbjct: 306 WVALLSGYAQNG 317



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 115/519 (22%), Positives = 205/519 (39%), Gaps = 116/519 (22%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           + A   H  +++ GF  +VF+  +LI +Y + G L  A KLF  M  R+ V W+ +++ Y
Sbjct: 355 QQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAY 414

Query: 62  THKGMSNEACKMFKEMVR------AGFLLNRYALGSVLRACQECG-----PSGFK-FGMQ 109
              G   EA ++F +M++      + + ++         A   C      P   K F M+
Sbjct: 415 GIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMR 474

Query: 110 VHCLVL------------------KSN-----QTFDGLVSNVLIAMYGSCLESTDCARRI 146
            H   L                  KSN       +D  +      MY S     D A  +
Sbjct: 475 AHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVS-FNRIDAASIV 533

Query: 147 FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS---LKPNEYTFGSLITA 203
           FE+I       WN +I  ++  G  +S  +L+S+M  +G +     + PN  +  S++ A
Sbjct: 534 FEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLA 593

Query: 204 A--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
                ++  G +    ++    + G   D+ V +A++  +++ G+   AR +F++   K+
Sbjct: 594 CGNLGALRKGEWFHSYVI----QTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKD 649

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRS-GLFD-MVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
           +V  + ++        +HG+  ++  LFD MV  G                       + 
Sbjct: 650 LVCWSAMIASY----GIHGHGRKAIDLFDQMVKAG-----------------------VR 682

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
              V++  ++S    +G  EE  M F       LM+  F +   LS+ A           
Sbjct: 683 PSHVTFTCVLSACSHSGLLEEGKMYF------QLMTEEFVIARKLSNYA----------- 725

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEA 438
                             ++ L   AG LS  + +   MP E D   W S++GA      
Sbjct: 726 -----------------CMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNN 768

Query: 439 L-VSEAVK---YYLDMRRAGWSPNGVTFINILAAASSFS 473
           L ++E +    ++LD   AG+    V   NI AA S ++
Sbjct: 769 LDLAEKIADHLFHLDPVHAGYH---VLLSNIYAAKSRWN 804


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 240/576 (41%), Positives = 363/576 (63%), Gaps = 7/576 (1%)

Query: 362  STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
            S L+ C S   I  GQ++H   +K   +  V +   L+ LY     L    +V   MPE 
Sbjct: 482  SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 541

Query: 422  DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
            + VSW ++I  ++      SEA+  +++M  +G +PN  TF  +L + +S S  +LG Q+
Sbjct: 542  NVVSWTAMISGYS-QRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQI 600

Query: 482  HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
            H+ VIK +  +   + ++LL  Y K G++ +  ++F  + ER D VS  ++ISGY    L
Sbjct: 601  HSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPER-DVVSCTAIISGYAQLGL 659

Query: 542  LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
              +A++L   + + G R ++ T+A+VL+A + +A L+ G +VH+  +RA L F VV+ ++
Sbjct: 660  DEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNS 719

Query: 602  LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-P 660
            L+DMYSKCG + Y+ R FD MP R V SWN+M+ GY++HG G +A+ LF  MK +  + P
Sbjct: 720  LIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKP 779

Query: 661  DHVTFVGVLSACSHAGLVDEGFKHFKSM-SQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
            D VTF+ VLS CSH G+ D G + F  M +Q  G  P++E + C+VDL GRAG +++  E
Sbjct: 780  DSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFE 839

Query: 720  FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASG 779
            FI KMP  P + IW ++LGAC R + +   +G   A  L E+E +NA NYV+L+N+YAS 
Sbjct: 840  FIKKMPFEPTAAIWGSLLGAC-RVH-QNVHIGEFVARRLLEIESENAGNYVILSNLYASA 897

Query: 780  GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
            G+W+DV   R+ MKE  V KE G SW+ +   +H F A D SHP K+ ++ K++EL+ K+
Sbjct: 898  GRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKI 957

Query: 840  RDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCH 898
            ++AGYVP+    L+D++ E KE ++  HSEK+A+AF ++      P+RI+KNLR+C DCH
Sbjct: 958  KEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCH 1017

Query: 899  SAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            +  KF+S++ GRE+ LRD NRFHH   G CSCGDYW
Sbjct: 1018 NFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 189/372 (50%), Gaps = 6/372 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R+G+ VH ++I++     V +   L+ +Y KC  + D+R V   M  ++ VSW  MISG 
Sbjct: 494 REGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGY 553

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            Q G   EA+  F  M   G   + F+  + L+SC S     LG+QIH   +K   +S +
Sbjct: 554 SQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHI 613

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V ++LL +YA AG +    +VF  +PE D VS  ++I  +A    L  EA+  +  ++R
Sbjct: 614 FVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQL-GLDEEALDLFRRLQR 672

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G   N VT+ ++L A S  +    G QVH+ V++  +     ++N+L+  Y KCG +  
Sbjct: 673 EGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTY 732

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSAC 571
             +IF  M E R  +SWN+M+ GY  + L  +A+ L   M +  + + D  TF  VLS C
Sbjct: 733 SRRIFDSMPE-RTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGC 791

Query: 572 ASVATLERGMEV--HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           +     +RG+E+       +   E ++     +VD++ + GR++ A  F   MP     +
Sbjct: 792 SHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAA 851

Query: 630 -WNSMISGYARH 640
            W S++     H
Sbjct: 852 IWGSLLGACRVH 863



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 184/362 (50%), Gaps = 51/362 (14%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H  ++K  +   V+L   LI +Y +   L  A ++ DEMP+RN VSW  ++SGY
Sbjct: 494 REGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGY 553

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           + +G ++EA  +F EM+ +G   N +   +VL +C     SGF+ G Q+H LV+K++   
Sbjct: 554 SQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSS--SGFQLGRQIHSLVIKTSFES 611

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V + L+ MY    +  + ARR+F+ +  RD++S  +IIS Y+Q G       LF R+
Sbjct: 612 HIFVGSSLLDMYAKAGKICE-ARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRL 670

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL---QQILAMVKKAGLLSDLYVGSALV 238
           QREG R     N  T+ S++TA     LSG   L   +Q+ + V +A L   + + ++L+
Sbjct: 671 QREGMR----SNYVTYASVLTA-----LSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLI 721

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLV 298
             +++ G+  Y+R+IF+ M ++ V+S N ++ G                           
Sbjct: 722 DMYSKCGSLTYSRRIFDSMPERTVISWNAMLVG--------------------------- 754

Query: 299 NMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAM--RRD 351
             Y+K G   ++  +F+ M     +  DSV++  ++SG    G  +  +  F  M  ++D
Sbjct: 755 --YSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKD 812

Query: 352 GL 353
           G 
Sbjct: 813 GF 814



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 154/320 (48%), Gaps = 12/320 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +  H  ++K  F   +F+ ++L+++Y + G +  A ++FD +P+R+ VS   I+SGY  
Sbjct: 597 GRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQ 656

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+  EA  +F+ + R G   N     SVL A    G +    G QVH  VL++   F  
Sbjct: 657 LGLDEEALDLFRRLQREGMRSNYVTYASVLTALS--GLAALDHGRQVHSHVLRAKLPFYV 714

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           ++ N LI MY  C  S   +RRIF+ +  R +ISWN+++  YS+ G      +LF  M+ 
Sbjct: 715 VLQNSLIDMYSKC-GSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKE 773

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           E     +KP+  TF ++++      +    L      + +K G   ++     +V  F R
Sbjct: 774 EN---KVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGR 830

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGR-RKGKEVH-GYLIRSGLFDMVAVGNG----L 297
            G    A +  ++M  +   ++ G + G  R  + VH G  +   L ++ +   G    L
Sbjct: 831 AGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVIL 890

Query: 298 VNMYAKCGTIDDSRSVFRFM 317
            N+YA  G  DD R+V   M
Sbjct: 891 SNLYASAGRWDDVRTVRELM 910



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 160/312 (51%), Gaps = 14/312 (4%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRRKGKEVHGYLIR 284
           +A++SG+++ G    A  +F +M+             V++      G + G+++H  +I+
Sbjct: 547 TAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIK 606

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
           +     + VG+ L++MYAK G I ++R VF  +  +D VS   +ISG  Q G  EEA+  
Sbjct: 607 TSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDL 666

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F  ++R+G+ S+  +  S L++ + L  +  G+Q+H   L+  L   V + N+L+ +Y+ 
Sbjct: 667 FRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSK 726

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG-WSPNGVTFI 463
            G L+   ++F  MPE   +SWN+++  ++    L  EAV+ +  M+      P+ VTF+
Sbjct: 727 CGSLTYSRRIFDSMPERTVISWNAMLVGYS-KHGLGREAVELFKLMKEENKVKPDSVTFL 785

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMS 521
            +L+  S   M   G ++  +++      E  IE+   ++  +G+ G +++  +   +M 
Sbjct: 786 AVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMP 845

Query: 522 ERRDEVSWNSMI 533
                  W S++
Sbjct: 846 FEPTAAIWGSLL 857



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 91/174 (52%), Gaps = 1/174 (0%)

Query: 552 MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR 611
           M  +G  ++   + +VL+ C S   +  G  VHA  ++ C E  V + + L+ +Y+KC  
Sbjct: 468 MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 527

Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
           +  A R  D MP RNV SW +MISGY++ G+  +AL LF +M + G  P+  TF  VL++
Sbjct: 528 LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 587

Query: 672 CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
           C+ +     G +   S+         +   S ++D+  +AG++ +     + +P
Sbjct: 588 CTSSSGFQLG-RQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 640


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 290/854 (33%), Positives = 442/854 (51%), Gaps = 97/854 (11%)

Query: 106 FGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE---STDCARRIFEEIETRDLISWNSII 162
           F  Q  C + K +     L + +   ++ SC+    S    R I  ++       +N+ I
Sbjct: 24  FSSQNGCFIHKPS-----LKTKIFSPIFSSCIPIRISATPTRTIDHQV-----TDYNAKI 73

Query: 163 SVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMV 222
             + Q GD  +  +L    ++      L+   Y+    + A   S   G    +++ +++
Sbjct: 74  LHFCQLGDLENAMELICMCKKS----ELETKTYSSVLQLCAGLKSFTDG----KKVHSII 125

Query: 223 KKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYL 282
           K   +  D  +G  LVS +A  G+    R++F+ M +KNV                  YL
Sbjct: 126 KSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNV------------------YL 167

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK--------------------DS 322
                       N +V+ YAK G   +S  +F+ M+ K                    D 
Sbjct: 168 -----------WNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDV 216

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           +SWN+MISG   NG  E  +  +  M   G+     ++IS L  CA+ G + LG+ +H  
Sbjct: 217 ISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            +K   +  ++ SN LL +Y+  G L   L+VF  M E + VSW S+I  +   +     
Sbjct: 277 AIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT-RDGRSDG 335

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           A+K    M + G   + V   +IL A +       G  VH  +   N+ +   + NAL+ 
Sbjct: 336 AIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMD 395

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            Y KCG M+    +F+ M   +D +SWN+MI      EL P                D  
Sbjct: 396 MYAKCGSMEAANSVFSTMV-VKDIISWNTMIG-----ELKP----------------DSR 433

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           T A VL ACAS++ LERG E+H   +R     D  + +ALVD+Y KCG +  A   FD++
Sbjct: 434 TMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
           P +++ SW  MI+GY  HG+G++A+  F++M+  G  PD V+F+ +L ACSH+GL+++G+
Sbjct: 494 PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
           + F  M   + + P+LE ++CMVDLL R G L K  EFI  +PI P++ IW  +L  C  
Sbjct: 554 RFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGC-- 611

Query: 743 ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
            N    EL  K A  +FE+EP+N+  YVLLAN+YA   KWE+V + R+ + +  ++K  G
Sbjct: 612 RNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPG 671

Query: 803 CSWVTMKDGVHVFVAGDE-SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKE 861
           CSW+ +K  V++FV+G+  SHP    I   LK++ +KM++ G+ P+TK+AL + +   KE
Sbjct: 672 CSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKE 731

Query: 862 DLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRF 920
             +  HSEK+A+AF +LT   +  IR+ KNLRVCGDCH   KF+SK   REIVLRD NRF
Sbjct: 732 MALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDPNRF 791

Query: 921 HHFNDGKCSCGDYW 934
           HHF DG CSC  +W
Sbjct: 792 HHFKDGYCSCRGFW 805



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 218/455 (47%), Gaps = 53/455 (11%)

Query: 19  DVFLCNTLINVYVRVGDLA--------------------SASKLFDEMPDRNSVSWACIV 58
           +V+L N +++ Y ++GD                      SA +LFD++ DR+ +SW  ++
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMI 223

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
           SGY   G++     ++K+M+  G  ++   + SVL  C   G      G  VH L +KS+
Sbjct: 224 SGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGT--LSLGKAVHSLAIKSS 281

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
                  SN L+ MY  C +  D A R+FE++  R+++SW S+I+ Y++ G +    KL 
Sbjct: 282 FERRINFSNTLLDMYSKCGD-LDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLL 340

Query: 179 SRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
            +M++EG    +K +     S++ A A S  L      + +   +K   + S+L+V +AL
Sbjct: 341 QQMEKEG----VKLDVVAITSILHACARSGSLDNG---KDVHDYIKANNMESNLFVCNAL 393

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGL--------------------MEGRRKGKE 277
           +  +A+ G+   A  +F  M+ K+++S N +                    +    +GKE
Sbjct: 394 MDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKE 453

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +HGY++R+G      V N LV++Y KCG +  +R +F  +  KD VSW  MI+G   +G 
Sbjct: 454 IHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGY 513

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IHGEGLKLGLDSDVSVSN 396
             EAI  F  MR  G+     S IS L +C+  G +  G +  +       ++  +    
Sbjct: 514 GNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYA 573

Query: 397 ALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI 430
            ++ L +  G LS+  +    +P   D   W +++
Sbjct: 574 CMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALL 608



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 127/533 (23%), Positives = 228/533 (42%), Gaps = 114/533 (21%)

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           SVL+ C   G   F  G +VH ++  ++   D  +   L++ Y +C +  +  RR+F+ +
Sbjct: 104 SVLQLCA--GLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKE-GRRVFDTM 160

Query: 151 ETRDLISWNSIISVYSQRGD---TISVFKLFSRMQREGFRYS---------LKPNEYTFG 198
           E +++  WN ++S Y++ GD   +I +FK+      EG R              +  ++ 
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWN 220

Query: 199 SLITAAYSSVLS----GSYLLQQILAMVKKAGLLSDLYVGSA------------------ 236
           S+I+   S+ L+    G Y     L +      +  + VG A                  
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280

Query: 237 -----------LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------- 274
                      L+  +++ G+   A ++FE+M ++NVVS   ++ G  +           
Sbjct: 281 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLL 340

Query: 275 ------------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
                                         GK+VH Y+  + +   + V N L++MYAKC
Sbjct: 341 QQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKC 400

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G+++ + SVF  M+ KD +SWNTMI  L  +                     + ++   L
Sbjct: 401 GSMEAANSVFSTMVVKDIISWNTMIGELKPD---------------------SRTMACVL 439

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +CASL  +  G++IHG  L+ G  SD  V+NAL+ LY   G L     +F ++P  D V
Sbjct: 440 PACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLV 499

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           SW  +I  +       +EA+  + +MR AG  P+ V+FI+IL A S   + + G +    
Sbjct: 500 SWTVMIAGYG-MHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-Y 557

Query: 485 VIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           ++K +   E  +E+   ++    + G +    +    +    D   W +++ G
Sbjct: 558 IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 133/278 (47%), Gaps = 34/278 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H   +K  F   +   NTL+++Y + GDL  A ++F++M +RN VSW  +++GYT 
Sbjct: 270 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 329

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G S+ A K+ ++M + G  L+  A+ S+L AC   G      G  VH  +  +N   + 
Sbjct: 330 DGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSG--SLDNGKDVHDYIKANNMESNL 387

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V N L+ MY  C  S + A  +F  +  +D+ISWN++I                     
Sbjct: 388 FVCNALMDMYAKC-GSMEAANSVFSTMVVKDIISWNTMIG-------------------- 426

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
                 LKP+  T   ++ A  S  LS     ++I   + + G  SD +V +ALV  + +
Sbjct: 427 -----ELKPDSRTMACVLPACAS--LSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY 281
            G    AR +F+ +  K++VS   ++ G      +HGY
Sbjct: 480 CGVLGLARLLFDMIPSKDLVSWTVMIAGY----GMHGY 513



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 148/344 (43%), Gaps = 44/344 (12%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H  I  +    ++F+CN L+++Y + G + +A+ +F  M  ++ +SW  ++ G  
Sbjct: 370 NGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI-GEL 428

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                  AC                    VL AC     S  + G ++H  +L++  + D
Sbjct: 429 KPDSRTMAC--------------------VLPACASL--SALERGKEIHGYILRNGYSSD 466

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V+N L+ +Y  C      AR +F+ I ++DL+SW  +I+ Y   G        F+ M+
Sbjct: 467 RHVANALVDLYVKC-GVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMR 525

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ----ILAMVKKAGLLSDLYVGSALV 238
             G    ++P+E +F S++ A      S S LL+Q       M     +   L   + +V
Sbjct: 526 DAG----IEPDEVSFISILYAC-----SHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMV 576

Query: 239 SGFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG 296
              +R GN   A +  E + I  +      L+ G R   ++     +   +F++    +G
Sbjct: 577 DLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSG 636

Query: 297 ----LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
               L N+YA+    ++ + + R  IGK  +  N   S ++  G
Sbjct: 637 YYVLLANIYAEAEKWEEVKRL-REKIGKQGLRKNPGCSWIEIKG 679


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 262/741 (35%), Positives = 414/741 (55%), Gaps = 69/741 (9%)

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLF 288
           S  Y+ + L++ +A  G   +AR++F+ M  +N+V+                        
Sbjct: 44  SPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVT------------------------ 79

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
                GN L++  A+ G + D   +F  +  +D+VS+N +++G  + G +  A   + A+
Sbjct: 80  -----GNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVAL 134

Query: 349 RRD--GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
            RD  G+  S  ++   +   ++LG   LG+Q+H + L+LG  +     + L+ +YA  G
Sbjct: 135 LRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVG 194

Query: 407 YLSRCLKVFFLMP-------------------------------EHDQVSWNSVIGAFAD 435
            +    +VF  M                                E D ++W +++     
Sbjct: 195 PIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQ 254

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           +  L SEA+  +  MR  G   +  TF +IL A  + +  + G Q+HA + +    +   
Sbjct: 255 N-GLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVF 313

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           + +AL+  Y KC  +   E +F RM  + + +SW +MI GY  N    +A+ +   M + 
Sbjct: 314 VGSALVDMYSKCRSVRLAEAVFRRMMWK-NIISWTAMIVGYGQNGCGEEAVRVFSEMQRD 372

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G + D FT  +V+S+CA++A+LE G + H   + + L   V + +ALV +Y KCG I+ A
Sbjct: 373 GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDA 432

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
            R FD M   +  SW +++ GYA+ G   + + LF +M   G  PD VTF+GVLSACS +
Sbjct: 433 HRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRS 492

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           GLVD+G  +F SM Q + ++P  + ++CM+DL  R+G L + EEFI +MP  P++  W T
Sbjct: 493 GLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWAT 552

Query: 736 VLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKE 794
           +L AC  R +    E+G+ AA  L +++PQN  +YVLL +M+AS G+W DVAK R+ M++
Sbjct: 553 LLSACRLRGD---MEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRD 609

Query: 795 AEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFD 854
            +VKKE GCSW+  K+ VH+F A D+SHP    IYEKL+ LN KM + GY P     L D
Sbjct: 610 RQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHD 669

Query: 855 LEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIV 913
           +    K  ++S+HSEK+A+AF ++    ++PIRI+KNLRVC DCH+A KFISKI GR+I+
Sbjct: 670 VADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITGRDIL 729

Query: 914 LRDSNRFHHFNDGKCSCGDYW 934
           +RD+ RFH F++G CSCGD+W
Sbjct: 730 VRDAVRFHKFSNGICSCGDFW 750



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 138/563 (24%), Positives = 271/563 (48%), Gaps = 74/563 (13%)

Query: 110 VHCLVLKS--NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQ 167
           VH L+L++  + +   L++ +L A   S L     ARR+F+ +  R+L++ NS++S  ++
Sbjct: 32  VHALILRTLPHPSPTYLLNTLLTAYASSGLLPH--ARRVFDAMPGRNLVTGNSLLSALAR 89

Query: 168 RGDTISVFKLFSRM-QREGFRYS----------------------------LKPNEYTFG 198
            G    + +LF+ + QR+   Y+                            ++P+  T  
Sbjct: 90  AGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMS 149

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
            ++  A  S L    L +Q+   + + G  +  + GS LV  +A++G    AR++F++  
Sbjct: 150 GVVMVA--SALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDE-- 205

Query: 259 QKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                     MEG+                  V + N ++    +C  + ++R++F  + 
Sbjct: 206 ----------MEGKN-----------------VVMCNTMITGLLRCKMVAEARALFEAIE 238

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            +DS++W TM++GL QNG   EA+  F  MR +G+    ++  S L++C +L  +  G+Q
Sbjct: 239 ERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQ 298

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           IH    +   + +V V +AL+ +Y+    +     VF  M   + +SW ++I  +  +  
Sbjct: 299 IHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQN-G 357

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
              EAV+ + +M+R G  P+  T  +++++ ++ +  + G Q H   +   +    T+ N
Sbjct: 358 CGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSN 417

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
           AL++ YGKCG ++D  ++F  MS   D+VSW +++ GY       + ++L   M+ +G +
Sbjct: 418 ALVTLYGKCGSIEDAHRLFDEMS-FHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVK 476

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI----GSALVDMYSKCGRIDY 614
            D  TF  VLSAC+    +++G        +   + D+V      + ++D+YS+ G +  
Sbjct: 477 PDGVTFIGVLSACSRSGLVDKGRSYFHSMQQ---DHDIVPLDDHYTCMIDLYSRSGWLKQ 533

Query: 615 ASRFFDLMP-VRNVYSWNSMISG 636
           A  F   MP   + + W +++S 
Sbjct: 534 AEEFIKQMPRCPDAFGWATLLSA 556



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 121/492 (24%), Positives = 207/492 (42%), Gaps = 99/492 (20%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR--AG 81
           N+L++   R G +    +LF  +P R++VS+  +++G++  G    A   +  ++R  AG
Sbjct: 81  NSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAG 140

Query: 82  FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD 141
              +R  +  V+      G      G QVHC +L+          + L+ MY       D
Sbjct: 141 VRPSRITMSGVVMVASALGDRA--LGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGD 198

Query: 142 C------------------------------ARRIFEEIETRDLISWNSIISVYSQRGDT 171
                                          AR +FE IE RD I+W ++++  +Q G  
Sbjct: 199 ARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLE 258

Query: 172 ISVFKLFSRMQREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLS 229
                +F RM+ EG    +  ++YTFGS++TA  A +++  G    +QI A + +     
Sbjct: 259 SEALDVFRRMRAEG----VGIDQYTFGSILTACGALAALEEG----KQIHAYITRTCYED 310

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------------- 272
           +++VGSALV  +++  +   A  +F +M+ KN++S   ++ G                  
Sbjct: 311 NVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQ 370

Query: 273 ------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
                                    +G + H   + SGL   V V N LV +Y KCG+I+
Sbjct: 371 RDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIE 430

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
           D+  +F  M   D VSW  ++ G  Q G  +E I  F  M   G+     + I  LS+C+
Sbjct: 431 DAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACS 490

Query: 369 SLGWIMLG-------QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE- 420
             G +  G       QQ H     + LD   +    ++ LY+ +G+L +  +    MP  
Sbjct: 491 RSGLVDKGRSYFHSMQQDHD---IVPLDDHYT---CMIDLYSRSGWLKQAEEFIKQMPRC 544

Query: 421 HDQVSWNSVIGA 432
            D   W +++ A
Sbjct: 545 PDAFGWATLLSA 556



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 197/402 (49%), Gaps = 30/402 (7%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +V +CNT+I   +R   +A A  LF+ + +R+S++W  +V+G T  G+ +EA  +F+ M 
Sbjct: 210 NVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMR 269

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             G  +++Y  GS+L AC     +  + G Q+H  + ++    +  V + L+ MY  C  
Sbjct: 270 AEGVGIDQYTFGSILTACGAL--AALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKC-R 326

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
           S   A  +F  +  +++ISW ++I  Y Q G      ++FS MQR+G    +KP+++T G
Sbjct: 327 SVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDG----IKPDDFTLG 382

Query: 199 SLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           S+I+  A  +S+  G+      LA+V  +GL   + V +ALV+ + + G+   A ++F++
Sbjct: 383 SVISSCANLASLEEGAQF--HCLALV--SGLRPYVTVSNALVTLYGKCGSIEDAHRLFDE 438

Query: 257 MIQKNVVSMNGLMEGRR---KGKE---VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDS 310
           M   + VS   L+ G     K KE   +   ++  G+        G+++  ++ G +D  
Sbjct: 439 MSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKG 498

Query: 311 RSVFRFMIGKDSV-----SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
           RS F  M     +      +  MI    ++G  ++A      M R       F   + LS
Sbjct: 499 RSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPR---CPDAFGWATLLS 555

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL-SLYADAG 406
           +C   G + +G+      LK  LD     S  LL S++A  G
Sbjct: 556 ACRLRGDMEIGKWAAENLLK--LDPQNPASYVLLCSMHASKG 595



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 18/261 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ K  H  I +  +  +VF+ + L+++Y +   +  A  +F  M  +N +SW  ++ GY
Sbjct: 294 EEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGY 353

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   EA ++F EM R G   + + LGSV+ +C     +  + G Q HCL L S    
Sbjct: 354 GQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANL--ASLEEGAQFHCLALVSGLRP 411

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              VSN L+ +YG C  S + A R+F+E+   D +SW +++  Y+Q G       LF +M
Sbjct: 412 YVTVSNALVTLYGKC-GSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKM 470

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVL---SGSYL--LQQILAMVKKAGLLSDLYVGSA 236
             +G    +KP+  TF  +++A   S L     SY   +QQ   +V     L D Y  + 
Sbjct: 471 LSKG----VKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVP----LDDHY--TC 520

Query: 237 LVSGFARLGNFYYARKIFEQM 257
           ++  ++R G    A +  +QM
Sbjct: 521 MIDLYSRSGWLKQAEEFIKQM 541



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 37/258 (14%)

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P+    +N L  A + S G L H    +V            N+LLS   + G + D E++
Sbjct: 43  PSPTYLLNTLLTAYA-SSGLLPHA--RRVFDAMPGRNLVTGNSLLSALARAGLVRDMERL 99

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM--QRGQRLDHFTFATVLSACASV 574
           F  + +R D VS+N++++G+       +A      ++  + G R    T + V+   +++
Sbjct: 100 FTSLPQR-DAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASAL 158

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY------ 628
                G +VH   +R         GS LVDMY+K G I  A R FD M  +NV       
Sbjct: 159 GDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMI 218

Query: 629 -------------------------SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
                                    +W +M++G  ++G   +AL +F +M+ +G   D  
Sbjct: 219 TGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQY 278

Query: 664 TFVGVLSACSHAGLVDEG 681
           TF  +L+AC     ++EG
Sbjct: 279 TFGSILTACGALAALEEG 296


>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 852

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 280/835 (33%), Positives = 438/835 (52%), Gaps = 111/835 (13%)

Query: 114 VLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTIS 173
           +  SNQ  +GL  +  I          D AR +F+++  RD  +WN+++S Y+  G  + 
Sbjct: 115 IFHSNQLLNGLSKSGQI----------DDARELFDKMLQRDEYTWNTMVSGYANVGRLVE 164

Query: 174 VFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYV 233
             +LF+     GF                                               
Sbjct: 165 ARELFN-----GFSSRSSITW--------------------------------------- 180

Query: 234 GSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLMEG------RRKGKEVHGYLI 283
            S+L+SG+ R G    A  +F++M     + +  ++  ++ G       +KG+ +HGY++
Sbjct: 181 -SSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVV 239

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI--GKDSVSWNTMISGLDQNGCYEEA 341
           ++G    V V  GLV+MYAKC  I ++  +F+ +     + V W  M++G  QNG   +A
Sbjct: 240 KNGFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKA 299

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           I  F  M  +G+ S+ F+  S L++C+S+     G+Q+HG  ++ G   +  V +AL+ +
Sbjct: 300 IEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDM 359

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           YA  G L    +V   M + D VSWNS+I           EA+  +  M       +  T
Sbjct: 360 YAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCV-RHGFEEEAILLFKKMHARNMKIDHYT 418

Query: 462 FINILAAASSFSMGKL-GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           F ++L       +G++ G  VH  VIK    N   + NAL+  Y K  +++    +F +M
Sbjct: 419 FPSVLNCCI---VGRIDGKSVHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKM 475

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
            E+ D +SW S+++GY  N    +++     M   G   D F  A++LSACA +  LE G
Sbjct: 476 FEK-DVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFG 534

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
            +VH+  ++  L   + + ++LV MY+KCG +D A   F  M VR+V +W ++I GYAR+
Sbjct: 535 KQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARN 594

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
           G G  +L                                   K+F+ M ++YG+ P  E 
Sbjct: 595 GKGRDSL-----------------------------------KYFQQMKKIYGIEPGPEH 619

Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
           ++CM+DL GR G+LD+ +E +N+M + P++ +W+ +L AC R +    ELG +AA  LFE
Sbjct: 620 YACMIDLFGRLGKLDEAKEILNQMDVKPDATVWKALLAAC-RVH-GNLELGERAATNLFE 677

Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           +EP NA+ YV+L+NMY +  KW+D AK R+ MK   + KE GCSW+ M   +H F++ D 
Sbjct: 678 LEPMNAMPYVMLSNMYLAARKWDDAAKIRRLMKSKGITKEPGCSWIEMNSRLHTFISEDR 737

Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTR 879
            HP +  IY K+ E+ +++++ GYVP   F+L D++ E KE  ++YHSEK+AVAF +L  
Sbjct: 738 GHPREAEIYSKIDEIIRRIKEVGYVPDMNFSLHDMDREGKEAGLAYHSEKLAVAFGLLAS 797

Query: 880 NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
               PIRI KNLRVCGDCHSA K+IS +  R I+LRDSN FHHF +G+CSC DYW
Sbjct: 798 PPGAPIRIFKNLRVCGDCHSAMKYISGVFTRHIILRDSNCFHHFKEGECSCEDYW 852



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 153/559 (27%), Positives = 270/559 (48%), Gaps = 87/559 (15%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D +  NT+++ Y  VG L  A +LF+    R+S++W+ ++SGY   G   EA  +FK M 
Sbjct: 145 DEYTWNTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMR 204

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             G   ++Y LGS+LR C   G    + G  +H  V+K+    +  V   L+ MY  C  
Sbjct: 205 LEGQKPSQYTLGSILRGCSALGL--IQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRH 262

Query: 139 STDCARRIFEEI--ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
            ++ A  +F+ +     + + W ++++ Y+Q GD     + F  M  EG    ++ N++T
Sbjct: 263 ISE-AEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEG----VESNQFT 317

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           F S++TA   S +S     +Q+   + + G   + YV SALV  +A+ G+   A+++ E 
Sbjct: 318 FPSILTAC--SSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLEN 375

Query: 257 MIQKNVVSMNGL---------------------------------------MEGRRKGKE 277
           M   +VVS N +                                       + GR  GK 
Sbjct: 376 MEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCCIVGRIDGKS 435

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VH  +I++G  +   V N LV+MYAK   ++ + +VF  M  KD +SW ++++G  QNG 
Sbjct: 436 VHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGS 495

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
           +EE++  FC MR  G+    F + S LS+CA L  +  G+Q+H + +KLGL S +SV+N+
Sbjct: 496 HEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNS 555

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA-GWS 456
           L+++YA  G L     +F  M   D ++W ++I  +A +     +++KY+  M++  G  
Sbjct: 556 LVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARN-GKGRDSLKYFQQMKKIYGIE 614

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P                    G + +A                ++  +G+ G++D+ ++I
Sbjct: 615 P--------------------GPEHYA---------------CMIDLFGRLGKLDEAKEI 639

Query: 517 FARMSERRDEVSWNSMISG 535
             +M  + D   W ++++ 
Sbjct: 640 LNQMDVKPDATVWKALLAA 658



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 170/340 (50%), Gaps = 19/340 (5%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  I+++GF  + ++ + L+++Y + GDL SA ++ + M D + VSW  ++ G    G  
Sbjct: 338 HGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFE 397

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA  +FK+M      ++ Y   SVL  C      G   G  VHCLV+K+      LVSN
Sbjct: 398 EEAILLFKKMHARNMKIDHYTFPSVLNCC----IVGRIDGKSVHCLVIKTGFENYKLVSN 453

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY    E  +CA  +FE++  +D+ISW S+++ Y+Q G      K F  M+  G  
Sbjct: 454 ALVDMYAKT-EDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISG-- 510

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             + P+++   S+++A   + L+     +Q+ +   K GL S L V ++LV+ +A+ G  
Sbjct: 511 --VSPDQFIVASILSAC--AELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCL 566

Query: 248 YYARKIFEQMIQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG------LVNM 300
             A  IF  M  ++V++   L+ G  R GK          +  +  +  G      ++++
Sbjct: 567 DDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQMKKIYGIEPGPEHYACMIDL 626

Query: 301 YAKCGTIDDSRSVFRFM-IGKDSVSWNTMISGLDQNGCYE 339
           + + G +D+++ +   M +  D+  W  +++    +G  E
Sbjct: 627 FGRLGKLDEAKEILNQMDVKPDATVWKALLAACRVHGNLE 666



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 147/345 (42%), Gaps = 62/345 (17%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D K  H  ++K GF     + N L+++Y +  DL  A  +F++M +++ +SW  +V+GYT
Sbjct: 432 DGKSVHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYT 491

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G   E+ K F +M  +G   +++ + S+L AC E   +  +FG QVH   +K      
Sbjct: 492 QNGSHEESLKTFCDMRISGVSPDQFIVASILSACAEL--TLLEFGKQVHSDFIKLGLRSS 549

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V+N L+ MY  C    D A  IF  +  RD+I+W ++I  Y++ G      K F +M+
Sbjct: 550 LSVNNSLVTMYAKC-GCLDDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQMK 608

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           +    Y ++P    +  +I                            DL         F 
Sbjct: 609 K---IYGIEPGPEHYACMI----------------------------DL---------FG 628

Query: 243 RLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVHGYL-----IRSGLFDMVAVGN- 295
           RLG    A++I  QM ++ +      L+   R    VHG L       + LF++  +   
Sbjct: 629 RLGKLDEAKEILNQMDVKPDATVWKALLAACR----VHGNLELGERAATNLFELEPMNAM 684

Query: 296 ---GLVNMYAKCGTIDDSRSVFRFMIGK-----DSVSWNTMISGL 332
               L NMY      DD+  + R M  K        SW  M S L
Sbjct: 685 PYVMLSNMYLAARKWDDAAKIRRLMKSKGITKEPGCSWIEMNSRL 729


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 264/684 (38%), Positives = 390/684 (57%), Gaps = 12/684 (1%)

Query: 257 MIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
           ++ K+    N L++G    +  K +H  L+R GL +   + N ++      G  + S  +
Sbjct: 5   IVTKSAGIKNRLIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRI 64

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
                  +   +NTMI GL  N C++E+I  + +MR++GL   +F+    L +CA +   
Sbjct: 65  LDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDS 124

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
            LG ++H   +K G ++D  V  +L++LY   G++    KVF  +P+ +  SW + I  +
Sbjct: 125 ELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGY 184

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE 493
                   EA+  +  +   G  P+  + + +L+A       + G  +   + +  +   
Sbjct: 185 V-GVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRN 243

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM 553
             +  AL+  YGKCG M+    +F  M E+ + VSW+SMI GY  N L  +A++L + M+
Sbjct: 244 VFVATALVDFYGKCGNMERARSVFDGMLEK-NIVSWSSMIQGYASNGLPKEALDLFFKML 302

Query: 554 QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF--DVVIGSALVDMYSKCGR 611
             G + D +    VL +CA +  LE G    A  +    EF  + V+G+AL+DMY+KCGR
Sbjct: 303 NEGLKPDCYAMVGVLCSCARLGALELGD--WASNLINGNEFLDNSVLGTALIDMYAKCGR 360

Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
           +D A   F  M  ++   WN+ ISG A  GH   AL LF QM+  G  PD  TFVG+L A
Sbjct: 361 MDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCA 420

Query: 672 CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
           C+HAGLV+EG ++F SM  V+ L P++E + CMVDLLGRAG LD+  + I  MP+  N++
Sbjct: 421 CTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAI 480

Query: 732 IWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKA 791
           +W  +LG  CR + R T+L       L  +EP ++ NYVLL+N+YA+  KWE+ AK R  
Sbjct: 481 VWGALLGG-CRLH-RDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSI 538

Query: 792 MKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFA 851
           M E  VKK  G SW+ +   VH F+ GD SHP  + IY KL EL + ++ AGYVP T   
Sbjct: 539 MSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHV 598

Query: 852 LFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGR 910
           LFD+E E KE  +  HSEK+AVAF +++      I ++KNLRVCGDCH A K IS+I GR
Sbjct: 599 LFDIEEEEKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGR 658

Query: 911 EIVLRDSNRFHHFNDGKCSCGDYW 934
           EI++RD+NRFH F DG CSC DYW
Sbjct: 659 EIIVRDNNRFHCFTDGLCSCKDYW 682



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 161/346 (46%), Gaps = 22/346 (6%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K G   D F+  +LIN+Y + G + +A K+FD++PD+N  SW   +SGY   G  
Sbjct: 131 HSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKC 190

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA  MF+ ++  G   + ++L  VL AC+  G    + G  +   + ++    +  V+ 
Sbjct: 191 REAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGD--LRSGEWIDEYITENGMVRNVFVAT 248

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+  YG C  + + AR +F+ +  ++++SW+S+I  Y+  G       LF +M  EG  
Sbjct: 249 ALVDFYGKC-GNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEG-- 305

Query: 188 YSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
             LKP+ Y   G L + A    L    L      ++     L +  +G+AL+  +A+ G 
Sbjct: 306 --LKPDCYAMVGVLCSCARLGALE---LGDWASNLINGNEFLDNSVLGTALIDMYAKCGR 360

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVH------GYLIRSGLFDMVAVGNGLVNM 300
              A ++F  M +K+ V  N  + G      V       G + +SG+        GL+  
Sbjct: 361 MDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCA 420

Query: 301 YAKCGTIDDSRSVFR-----FMIGKDSVSWNTMISGLDQNGCYEEA 341
               G +++ R  F      F +  +   +  M+  L + GC +EA
Sbjct: 421 CTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEA 466


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 262/739 (35%), Positives = 408/739 (55%), Gaps = 69/739 (9%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFD 289
           + ++ + +V  +A + +  YAR++F+ + Q N+ S N L+                    
Sbjct: 37  ETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNLLLA------------------ 78

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
                      Y+K G + +    F  +  +D V+WN +I G   +G    A+  +  M 
Sbjct: 79  -----------YSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 127

Query: 350 RDGLMSSNFS---LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
           +D   SSN +   L++ L   +S G + LG+QIHG+ +KLG +S + V + LL +Y+  G
Sbjct: 128 KD--FSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVG 185

Query: 407 YLSRCLKVFFLMP------------------------------EHDQVSWNSVIGAFADS 436
            +S   KVF+ +                               E D VSW+++I   A +
Sbjct: 186 CISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQN 245

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
             +  EA++ + +M+  G   +   F ++L A         G Q+HA +I+ N+ +   +
Sbjct: 246 -GMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYV 304

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
            +AL+  Y KC  +   + +F RM ++++ VSW +M+ GY       +A+ +   M + G
Sbjct: 305 GSALIDMYCKCKCLHYAKTVFDRM-KQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSG 363

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
              DH+T    +SACA++++LE G + H   + A L   + + ++LV +Y KCG ID ++
Sbjct: 364 IDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDST 423

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
           R F+ M VR+  SW +M+S YA+ G   +A+ LF +M   G  PD VT  GV+SACS AG
Sbjct: 424 RLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAG 483

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
           LV++G ++F+ M   YG++P    +SCM+DL  R+G +++   FIN MP  P+++ W T+
Sbjct: 484 LVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTL 543

Query: 737 LGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAE 796
           L AC   N    E+G+ AA  L E++P +   Y LL+++YAS GKW+ VA+ R+ MKE  
Sbjct: 544 LSAC--RNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKN 601

Query: 797 VKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLE 856
           V+KE G SW+  K  +H F A DES P  D IY KL+EL QK+ D GY P T F   D+E
Sbjct: 602 VRKEPGQSWIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVE 661

Query: 857 PESKEDLVSYHSEKIAVAFVLT-RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLR 915
              K  +++ HSE++A+AF L    S LPIR+ KNLRVC DCH+A K IS + GREI++R
Sbjct: 662 EAVKIKMLNCHSERLAIAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVR 721

Query: 916 DSNRFHHFNDGKCSCGDYW 934
           D+ RFH F DG CSCGD+W
Sbjct: 722 DAVRFHRFKDGTCSCGDFW 740



 Score =  232 bits (592), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 164/564 (29%), Positives = 275/564 (48%), Gaps = 67/564 (11%)

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
           +H  ++++    +  + N ++  Y + + S+  ARR+F+ I   +L SWN+++  YS+ G
Sbjct: 25  IHGNIIRTLPHPETFLHNNIVHAY-ALIRSSIYARRVFDGIPQPNLFSWNNLLLAYSKSG 83

Query: 170 DTISVFKLFSRM-QREGFRYSLKPNEYTFGSLITAA----------YSSVLSGSYLL--- 215
               + + F ++  R+G  +++    Y+   L+ AA          +SS L+   L+   
Sbjct: 84  HLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTML 143

Query: 216 ------------QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
                       +QI   V K G  S L VGS L+  ++++G    A+K+F  +  +N V
Sbjct: 144 KLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTV 203

Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
             N LM G                                CG I+D+  +FR M  KDSV
Sbjct: 204 MYNTLMGG-----------------------------LLACGMIEDALQLFRGM-EKDSV 233

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SW+ MI GL QNG  +EAI  F  M+ +GL    +   S L +C  LG I  G+QIH   
Sbjct: 234 SWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACI 293

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           ++  L   + V +AL+ +Y     L     VF  M + + VSW +++  +  +     EA
Sbjct: 294 IRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQT-GRAGEA 352

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           VK +LDM+R+G  P+  T    ++A ++ S  + G Q H + I   + +  T+ N+L++ 
Sbjct: 353 VKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTL 412

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           YGKCG++DD  ++F  M+  RDEVSW +M+S Y       +A+ L   M+Q G + D  T
Sbjct: 413 YGKCGDIDDSTRLFNEMNV-RDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVT 471

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFF 619
              V+SAC+    +E+G       +    E+ +V      S ++D++S+ GRI+ A  F 
Sbjct: 472 LTGVISACSRAGLVEKGQRYFELMIN---EYGIVPSNGHYSCMIDLFSRSGRIEEAMGFI 528

Query: 620 DLMPVR-NVYSWNSMISGYARHGH 642
           + MP R +   W +++S     G+
Sbjct: 529 NGMPFRPDAIGWTTLLSACRNKGN 552



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/490 (25%), Positives = 213/490 (43%), Gaps = 87/490 (17%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           ++F  N L+  Y + G L+   + F+++PDR+ V+W  ++ GY+  G+   A K +  M+
Sbjct: 68  NLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 127

Query: 79  RA-GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
           +     L R  L ++L+     G      G Q+H  V+K       LV + L+ MY    
Sbjct: 128 KDFSSNLTRVTLMTMLKLSSSNGH--VSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVG 185

Query: 138 ESTDCARRIFEEIETR------------------------------DLISWNSIISVYSQ 167
             +D A+++F  ++ R                              D +SW+++I   +Q
Sbjct: 186 CISD-AKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQ 244

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKA 225
            G      + F  M+ EG    LK ++Y FGS++ A     ++  G    +QI A + + 
Sbjct: 245 NGMEKEAIECFREMKIEG----LKMDQYPFGSVLPACGGLGAINDG----RQIHACIIRT 296

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------- 272
            L   +YVGSAL+  + +    +YA+ +F++M QKNVVS   ++ G              
Sbjct: 297 NLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIF 356

Query: 273 ----------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
                                        +G + HG  I +GL   + V N LV +Y KC
Sbjct: 357 LDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKC 416

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G IDDS  +F  M  +D VSW  M+S   Q G   EAI  F  M + GL     +L   +
Sbjct: 417 GDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVI 476

Query: 365 SSCASLGWIMLGQQIHGEGL-KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHD 422
           S+C+  G +  GQ+     + + G+       + ++ L++ +G +   +     MP   D
Sbjct: 477 SACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPD 536

Query: 423 QVSWNSVIGA 432
            + W +++ A
Sbjct: 537 AIGWTTLLSA 546



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 224/494 (45%), Gaps = 81/494 (16%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRN------------- 50
            K  H Q++K GF   + + + L+++Y +VG ++ A K+F  + DRN             
Sbjct: 155 GKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLA 214

Query: 51  -----------------SVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVL 93
                            SVSW+ ++ G    GM  EA + F+EM   G  +++Y  GSVL
Sbjct: 215 CGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVL 274

Query: 94  RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
            AC   G      G Q+H  ++++N      V + LI MY  C +    A+ +F+ ++ +
Sbjct: 275 PACG--GLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKC-KCLHYAKTVFDRMKQK 331

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA--YSSVLSG 211
           +++SW +++  Y Q G      K+F  MQR G    + P+ YT G  I+A    SS+  G
Sbjct: 332 NVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSG----IDPDHYTLGQAISACANISSLEEG 387

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           S    Q       AGL+  + V ++LV+ + + G+   + ++F +M  ++ VS   ++  
Sbjct: 388 S----QFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSA 443

Query: 272 RRK-GKEVHGYLIRSGLFD-MVAVG--------NGLVNMYAKCGTIDDSRSVFRFMIGKD 321
             + G+ V        LFD MV +G         G+++  ++ G ++  +  F  MI + 
Sbjct: 444 YAQFGRAVEAIQ----LFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEY 499

Query: 322 SV-----SWNTMISGLDQNGCYEEAI--MNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
            +      ++ MI    ++G  EEA+  +N    R D +        + LS+C + G + 
Sbjct: 500 GIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAI-----GWTTLLSACRNKGNLE 554

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALL-SLYADAG------YLSRCLKVFFLMPEHDQ--VS 425
           +G+    E L + LD        LL S+YA  G       L R +K   +  E  Q  + 
Sbjct: 555 IGKWA-AESL-IELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIK 612

Query: 426 WNSVIGAF-ADSEA 438
           W   + +F AD E+
Sbjct: 613 WKGKLHSFSADDES 626



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 7/201 (3%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D +  H  I++      +++ + LI++Y +   L  A  +FD M  +N VSW  +V GY 
Sbjct: 285 DGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYG 344

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G + EA K+F +M R+G   + Y LG  + AC     S  + G Q H   + +     
Sbjct: 345 QTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANI--SSLEEGSQFHGKAITAGLIHY 402

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             VSN L+ +YG C +  D + R+F E+  RD +SW +++S Y+Q G  +   +LF +M 
Sbjct: 403 ITVSNSLVTLYGKCGDIDD-STRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMV 461

Query: 183 REGFRYSLKPNEYTFGSLITA 203
           + G    LKP+  T   +I+A
Sbjct: 462 QLG----LKPDGVTLTGVISA 478



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 56/99 (56%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++   FH + +  G  + + + N+L+ +Y + GD+  +++LF+EM  R+ VSW  +VS Y
Sbjct: 385 EEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAY 444

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G + EA ++F +MV+ G   +   L  V+ AC   G
Sbjct: 445 AQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAG 483



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/252 (20%), Positives = 100/252 (39%), Gaps = 18/252 (7%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           ++  +  C  +        +H   +R     +  + + +V  Y+      YA R FD +P
Sbjct: 6   YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
             N++SWN+++  Y++ GH  +    F ++    P  D VT+  ++   S +GLV    K
Sbjct: 66  QPNLFSWNNLLLAYSKSGHLSEMERTFEKL----PDRDGVTWNVLIEGYSLSGLVGAAVK 121

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD---KIEEFINKMPITPNSLIWRTVLGAC 740
            + +M + +           M+ L    G +    +I   + K+      L+   +L   
Sbjct: 122 AYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMY 181

Query: 741 CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKE 800
            +  C        A  + + ++ +N V Y  L     + G  ED  +  + M++  V   
Sbjct: 182 SKVGCIS-----DAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSV--- 233

Query: 801 AGCSWVTMKDGV 812
              SW  M  G+
Sbjct: 234 ---SWSAMIKGL 242


>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 279/783 (35%), Positives = 421/783 (53%), Gaps = 90/783 (11%)

Query: 203 AAYSSVLSGSYLLQQIL--AMVKKAGLL------SDLYVGSALVSGFARLGNFYYARKIF 254
           A YSS L  + LL ++     V +A  L       D Y  + ++S +A LGN   ARK+F
Sbjct: 32  AHYSSNLDSNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLF 91

Query: 255 EQMIQKNVVSMNGLM----------EGRRK------------------------------ 274
            +   KN ++ + L+          EG R+                              
Sbjct: 92  NETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLH 151

Query: 275 -GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG-KDSVSWNTMISGL 332
            GK +H Y I+  L   + V  GLV+MY+KC  + ++  +F  +   K+ V W  M++G 
Sbjct: 152 TGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGY 211

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            QNG   +AI  F  MR  G+ S++F+  S L++C S+     G+Q+HG  +  G   +V
Sbjct: 212 AQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNV 271

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V +AL+ +YA  G L+    +   M   D V WNS+I     +   + EA+  +  M  
Sbjct: 272 YVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCV-THGYMEEALVLFHKMHN 330

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
                +  T+ ++L + +S    K+G  VH+  IK       T+ NAL+  Y K G +  
Sbjct: 331 RDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSC 390

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
              +F ++ ++ D +SW S+++GY+HN    KA+ L   M      LD F  A V SACA
Sbjct: 391 ALDVFNKILDK-DVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACA 449

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
            +  +E G +VHA  +++     +   ++L+ MY+KCG ++ A R FD M  RNV SW +
Sbjct: 450 ELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTA 509

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           +I GYA++G                                   LV+ G  +F+SM +VY
Sbjct: 510 IIVGYAQNG-----------------------------------LVETGQSYFESMEKVY 534

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
           G+ P  + ++CM+DLLGRAG++++ E  +N+M + P++ IW+++L AC R +    ELG 
Sbjct: 535 GIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSAC-RVH-GNLELGE 592

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
           +A   L ++EP N++ YVLL+NM++  G+WED A  R+AMK   + KE G SW+ MK  V
Sbjct: 593 RAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYSWIEMKSQV 652

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
           H F++ D SHP    IY K+ E+   +++AG+VP   FAL D++ E+KE  ++YHSEK+A
Sbjct: 653 HTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLA 712

Query: 873 VAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
           VAF +LT     PIRI KNLRVCGDCHSA K+IS I  R I+LRD N FHHF +GKCSCG
Sbjct: 713 VAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIFKRHIILRDLNCFHHFIEGKCSCG 772

Query: 932 DYW 934
           D+W
Sbjct: 773 DFW 775



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 145/558 (25%), Positives = 250/558 (44%), Gaps = 84/558 (15%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D +  N +I+ Y  +G+L  A KLF+E P +NS++W+ +VSGY   G   E  + F +M 
Sbjct: 67  DKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMW 126

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             G   ++Y LGSVLRAC     S    G  +HC  +K     +  V+  L+ MY  C  
Sbjct: 127 SDGQKPSQYTLGSVLRACSTL--SLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKC 184

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             +     F   + ++ + W ++++ Y+Q G+++   + F  M+ +G    ++ N +TF 
Sbjct: 185 LLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQG----MESNHFTFP 240

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           S++TA  S  +S     +Q+   +  +G   ++YV SALV  +A+ G+   AR I + M 
Sbjct: 241 SILTACTS--ISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTME 298

Query: 259 QKNVVSMNGLMEG-----------------------------------------RRKGKE 277
             +VV  N ++ G                                          + G+ 
Sbjct: 299 IDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGES 358

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VH   I++G      V N LV+MYAK G +  +  VF  ++ KD +SW ++++G   NG 
Sbjct: 359 VHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGF 418

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
           +E+A+  FC MR   +    F +    S+CA L  I  G+Q+H   +K    S +S  N+
Sbjct: 419 HEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENS 478

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+++YA  G L   ++VF  M   + +SW ++I  +A +  LV     Y+  M +     
Sbjct: 479 LITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQN-GLVETGQSYFESMEKV---- 533

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
                                         Y +   +     ++   G+ G++++ E + 
Sbjct: 534 ------------------------------YGIKPASDHYACMIDLLGRAGKINEAEHLL 563

Query: 518 ARMSERRDEVSWNSMISG 535
            RM    D   W S++S 
Sbjct: 564 NRMDVEPDATIWKSLLSA 581



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 6/194 (3%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   +K GF     + N L+++Y + G+L+ A  +F+++ D++ +SW  +V+GY H G  
Sbjct: 360 HSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFH 419

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            +A ++F +M  A   L+++ +  V  AC E   +  +FG QVH   +KS+        N
Sbjct: 420 EKALQLFCDMRTARVDLDQFVVACVFSACAEL--TVIEFGRQVHANFIKSSAGSLLSAEN 477

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI MY  C    D A R+F+ +ETR++ISW +II  Y+Q G   +    F  M++    
Sbjct: 478 SLITMYAKCGCLED-AIRVFDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEK---V 533

Query: 188 YSLKPNEYTFGSLI 201
           Y +KP    +  +I
Sbjct: 534 YGIKPASDHYACMI 547



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 186/427 (43%), Gaps = 59/427 (13%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  I+  GF  +V++ + L+++Y + GDLASA  + D M   + V W  ++ G    G  
Sbjct: 259 HGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYM 318

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA  +F +M      ++ +   SVL++   C     K G  VH L +K+       VSN
Sbjct: 319 EEALVLFHKMHNRDIRIDDFTYPSVLKSLASC--KNLKIGESVHSLTIKTGFDACKTVSN 376

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY     +  CA  +F +I  +D+ISW S+++ Y   G      +LF  M+    R
Sbjct: 377 ALVDMYAK-QGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTA--R 433

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             L  +++    + +A   + L+     +Q+ A   K+   S L   ++L++ +A+ G  
Sbjct: 434 VDL--DQFVVACVFSAC--AELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCL 489

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
             A ++F+ M  +NV+S   ++ G                             YA+ G +
Sbjct: 490 EDAIRVFDSMETRNVISWTAIIVG-----------------------------YAQNGLV 520

Query: 308 DDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSL 360
           +  +S F  M     I   S  +  MI  L + G   EA  ++N   +  D  +      
Sbjct: 521 ETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWK---- 576

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-------LYADAGYLSRCLK 413
            S LS+C   G + LG++  G+ L + L+   S+   LLS        + DA ++ R +K
Sbjct: 577 -SLLSACRVHGNLELGERA-GKNL-IKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMK 633

Query: 414 VFFLMPE 420
              +  E
Sbjct: 634 TMGINKE 640


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 234/574 (40%), Positives = 363/574 (63%), Gaps = 6/574 (1%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           + L  C     +  G+ +HG  ++     D+ ++N LL++YA  G L    KVF  MPE 
Sbjct: 56  TLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPER 115

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D V+W ++I  ++  +    +A+  +  M R G+SPN  T  +++ AA++   G  GHQ+
Sbjct: 116 DFVTWTTLISGYSQHDRPF-DALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQL 174

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H   +K    +   + +ALL  Y + G MDD + +F  + E R++VSWN++I+G+     
Sbjct: 175 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL-ESRNDVSWNALIAGHARRCG 233

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             KA+ L   M++ G R  HF++A++  AC+S   LE+G  VHA  +++  +     G+ 
Sbjct: 234 TEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 293

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+DMY+K G I  A + FD +  R+V SWNS+++ YA+HG G++A+  F +M+  G  P+
Sbjct: 294 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPN 353

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            ++F+ VL+ACSH+GL+DEG+ +++ M +  G++ +   +  +VDLLGRAG+L++   FI
Sbjct: 354 EISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVLEAWHYVTIVDLLGRAGDLNRALRFI 412

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
            +MPI P + IW+ +L A CR + + TELG  AA  +FE++P +   +V+L N+YASGG+
Sbjct: 413 EEMPIEPTAAIWKALLNA-CRMH-KNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 470

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           W D A+ RK MKE+ VKKE  CSWV +++ +H+FVA DE HP+++ I  K +E+  K+++
Sbjct: 471 WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 530

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSA 900
            GYVP T   +  ++ + +E  + YHSEKIA+AF L        I I KN+RVCGDCHSA
Sbjct: 531 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSA 590

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            K  SK VGREI++RD+NRFHHF DG CSC DYW
Sbjct: 591 IKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 208/404 (51%), Gaps = 11/404 (2%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +G+ VHG+LI+S     + + N L+NMYAKCG+++++R VF  M  +D V+W T+ISG  
Sbjct: 69  QGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYS 128

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           Q+    +A++ F  M R G   + F+L S + + A+      G Q+HG  +K G DS+V 
Sbjct: 129 QHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 188

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V +ALL LY   G +     VF  +   + VSWN++I   A       +A++ +  M R 
Sbjct: 189 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA-RRCGTEKALELFQGMLRE 247

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G+ P+  ++ ++  A SS    + G  VHA +IK          N LL  Y K G + D 
Sbjct: 248 GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDA 307

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWF--MMQRGQRLDHFTFATVLSAC 571
            KIF R++ +RD VSWNS+++ Y  +    +A  + WF  M + G R +  +F +VL+AC
Sbjct: 308 RKIFDRLA-KRDVVSWNSLLTAYAQHGFGNEA--VCWFEEMRRGGIRPNEISFLSVLTAC 364

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-W 630
           +    L+ G   +    +  +  +      +VD+  + G ++ A RF + MP+    + W
Sbjct: 365 SHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIW 424

Query: 631 NSMISGYARHGH---GDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
            ++++    H +   G  A     ++  D P P HV    + ++
Sbjct: 425 KALLNACRMHKNTELGAYAAEHVFELDPDDPGP-HVILYNIYAS 467



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 205/432 (47%), Gaps = 76/432 (17%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           ++ H  +++  F +D+ + NTL+N+Y + G L  A K+FD+MP+R+ V+W  ++SGY+  
Sbjct: 71  RIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQH 130

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
               +A  +F +M+R GF  N + L SV++A           G Q+H   +K     +  
Sbjct: 131 DRPFDALVLFNQMLRFGFSPNEFTLSSVIKAA--AAERRGCCGHQLHGFCVKCGFDSNVH 188

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V + L+ +Y +     D A+ +F+ +E+R+ +SWN++I+ +++R  T    +LF  M RE
Sbjct: 189 VGSALLDLY-TRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLRE 247

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVGSALVSGF 241
           GFR    P+ +++ SL  A      S +  L+Q   + A + K+G     + G+ L+  +
Sbjct: 248 GFR----PSHFSYASLFGAC-----SSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMY 298

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
           A+ G+ + ARKIF+++ +++VVS N L+                               Y
Sbjct: 299 AKSGSIHDARKIFDRLAKRDVVSWNSLLTA-----------------------------Y 329

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
           A+ G             G ++V W            +EE       MRR G+  +  S +
Sbjct: 330 AQHG------------FGNEAVCW------------FEE-------MRRGGIRPNEISFL 358

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-E 420
           S L++C+  G +  G   +    K G+  +      ++ L   AG L+R L+    MP E
Sbjct: 359 SVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIE 418

Query: 421 HDQVSWNSVIGA 432
                W +++ A
Sbjct: 419 PTAAIWKALLNA 430



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 135/247 (54%), Gaps = 2/247 (0%)

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFIN-ILAAASSFSMGKLGHQVHAQVIKYNVANET 494
           SE    E++K+  +     + P    F N +L   + F +   G  VH  +I+    ++ 
Sbjct: 27  SEDSDDESLKFPSNDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDL 86

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
            + N LL+ Y KCG +++  K+F +M E RD V+W ++ISGY  ++    A+ L   M++
Sbjct: 87  VMNNTLLNMYAKCGSLEEARKVFDKMPE-RDFVTWTTLISGYSQHDRPFDALVLFNQMLR 145

Query: 555 RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
            G   + FT ++V+ A A+      G ++H   V+   + +V +GSAL+D+Y++ G +D 
Sbjct: 146 FGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 205

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
           A   FD +  RN  SWN++I+G+AR    +KAL LF  M  +G  P H ++  +  ACS 
Sbjct: 206 AQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSS 265

Query: 675 AGLVDEG 681
            G +++G
Sbjct: 266 TGFLEQG 272



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 51/99 (51%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K G     F  NTL+++Y + G +  A K+FD +  R+ VSW  +++ Y
Sbjct: 270 EQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAY 329

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G  NEA   F+EM R G   N  +  SVL AC   G
Sbjct: 330 AQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSG 368


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 281/724 (38%), Positives = 399/724 (55%), Gaps = 54/724 (7%)

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK- 320
           V+   G +   R G  VH  +  SG    V VGNGLV+MY +CG  +++R VF  M  + 
Sbjct: 151 VLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERG 210

Query: 321 --DSVSWNTMISGLDQNGCYEEAIMNFCAMRRD-GLMSSNFSLISTLSSCASLGWIMLGQ 377
             D VSWN++++   Q G    A+  F  M  D G+     SL++ L +CAS+G    G+
Sbjct: 211 VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGK 270

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV------IG 431
           Q+HG  L+ GL  DV V NA++ +YA  G +    KVF  M   D VSWN++      IG
Sbjct: 271 QVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIG 330

Query: 432 AFADSEALVS----------------------------EAVKYYLDMRRAGWSPNGVTFI 463
            F D+  L                              EA+  +  M   G  PN VT +
Sbjct: 331 RFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLV 390

Query: 464 NILAAASSFSMGKLGHQVHAQVIKY-------NVANETTIENALLSCYGKCGEMDDCEKI 516
           ++L+  +S      G + H   IK+       +  ++  + NAL+  Y KC        +
Sbjct: 391 SLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 450

Query: 517 FARMSER-RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL--DHFTFATVLSACAS 573
           F  +  + R  V+W  +I G   +    +A+ L   M+Q    +  + FT +  L ACA 
Sbjct: 451 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 510

Query: 574 VATLERGMEVHACGVRACLEFDVV-IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
           +  L  G ++HA  +R   E  ++ + + L+DMYSK G +D A   FD M  RN  SW S
Sbjct: 511 LGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTS 570

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           +++GY  HG G++AL +F +M+    +PD VTFV VL ACSH+G+VD+G  +F  M++ +
Sbjct: 571 LMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDF 630

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELG 751
           G++P  E ++CMVDLL RAG LD+  E I  MP+ P   +W  +L AC   AN    ELG
Sbjct: 631 GVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYAN---VELG 687

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
             AAN L E+E  N  +Y LL+N+YA+   W+DVA+ R  MK   +KK  GCSWV  + G
Sbjct: 688 EYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKG 747

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
              F AGD SHP    IY+ L++L Q+++  GYVP  +FAL D++ E K DL+S HSEK+
Sbjct: 748 TATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKL 807

Query: 872 AVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           A+A+ +LT     PIRI KNLR CGDCHSAF +IS I+  EI++RDS+RFHHF +G CSC
Sbjct: 808 ALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSC 867

Query: 931 GDYW 934
             YW
Sbjct: 868 RGYW 871



 Score =  229 bits (584), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 185/659 (28%), Positives = 321/659 (48%), Gaps = 71/659 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEM-PDRNSVSW-ACIVSGY 61
           A+L H Q+L  G  +D      +I++Y+     A A  +   + P  ++V W   ++   
Sbjct: 64  AELTHQQLLVQGLPHDP---THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRS 120

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
            H G   +  ++++ M R G+  + Y    VL+AC E  PS F+ G  VH +V  S   +
Sbjct: 121 VHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEI-PS-FRCGASVHAVVFASGFEW 178

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETR---DLISWNSIISVYSQRGDTISVFKLF 178
           +  V N L++MYG C  + + AR++F+E+  R   DL+SWNSI++ Y Q GD+I   K+F
Sbjct: 179 NVFVGNGLVSMYGRC-GAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMF 237

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
            RM  +     ++P+  +  +++ A  S  +      +Q+     ++GL  D++VG+A+V
Sbjct: 238 ERMTED---LGIRPDAVSLVNVLPACAS--VGAWSRGKQVHGYALRSGLFEDVFVGNAVV 292

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLV 298
             +A+ G    A K+FE+M  K+VVS N ++ G                           
Sbjct: 293 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTG--------------------------- 325

Query: 299 NMYAKCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
             Y++ G  DD+  +F  +    I  + V+W+ +I+G  Q G   EA+  F  M   G  
Sbjct: 326 --YSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSE 383

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLK--LGLDS-----DVSVSNALLSLYADAGY 407
            +  +L+S LS CAS G ++ G++ H   +K  L LD      D+ V NAL+ +Y+    
Sbjct: 384 PNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKS 443

Query: 408 LSRCLKVFFLMPEHDQ--VSWNSVIGAFADSEALVSEAVKYYLDMRRAG--WSPNGVTFI 463
                 +F L+P  D+  V+W  +IG  A      +EA++ +  M +      PN  T  
Sbjct: 444 PKAARAMFDLIPPKDRSVVTWTVLIGGNA-QHGEANEALELFSQMLQPDNFVMPNAFTIS 502

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETT-IENALLSCYGKCGEMDDCEKIFARMSE 522
             L A +     + G Q+HA V++    +    + N L+  Y K G++D    +F  M +
Sbjct: 503 CALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQ 562

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
            R+ VSW S+++GY  +    +A+ + + M +     D  TF  VL AC+    +++G+ 
Sbjct: 563 -RNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGIN 621

Query: 583 VHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISG 636
            +  G+    +F VV G    + +VD+ S+ GR+D A      MP++   + W +++S 
Sbjct: 622 -YFNGMNK--DFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSA 677



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 156/570 (27%), Positives = 267/570 (46%), Gaps = 75/570 (13%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR---NSVSWACIVSGYTHK 64
           H  +   GF ++VF+ N L+++Y R G   +A ++FDEM +R   + VSW  IV+ Y   
Sbjct: 168 HAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQG 227

Query: 65  GMSNEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           G S  A KMF+ M    G   +  +L +VL AC   G   +  G QVH   L+S    D 
Sbjct: 228 GDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVG--AWSRGKQVHGYALRSGLFEDV 285

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V N ++ MY  C    + A ++FE ++ +D++SWN++++ YSQ G       LF +++ 
Sbjct: 286 FVGNAVVDMYAKC-GMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIRE 344

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           E     ++ N  T+                                     SA+++G+A+
Sbjct: 345 E----KIELNVVTW-------------------------------------SAVIAGYAQ 363

Query: 244 LGNFYYARKIFEQMI----QKNVVSMNGLMEG------RRKGKEVHGYLIRSGLF----- 288
            G  + A  +F QM+    + NVV++  L+ G         GKE H + I+  L      
Sbjct: 364 RGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDEND 423

Query: 289 --DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS--VSWNTMISGLDQNGCYEEAIMN 344
             D + V N L++MY+KC +   +R++F  +  KD   V+W  +I G  Q+G   EA+  
Sbjct: 424 PGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALEL 483

Query: 345 FCAMRRDG--LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD-VSVSNALLSL 401
           F  M +    +M + F++   L +CA LG +  G+QIH   L+   +S  + V+N L+ +
Sbjct: 484 FSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDM 543

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y+ +G +     VF  M + + VSW S++  +        EA++ + +M++    P+GVT
Sbjct: 544 YSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYG-MHGRGEEALQIFYEMQKVXLVPDGVT 602

Query: 462 FINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           F+ +L A S   M   G      + K + V         ++    + G +D+  ++   M
Sbjct: 603 FVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGM 662

Query: 521 SERRDEVSWNSMISG---YIHNELLPKAMN 547
             +     W +++S    Y + EL   A N
Sbjct: 663 PMKPTPAVWVALLSACRVYANVELGEYAAN 692



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 203/472 (43%), Gaps = 69/472 (14%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP---------------- 47
            K  H   L+ G   DVF+ N ++++Y + G +  A+K+F+ M                 
Sbjct: 269 GKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQ 328

Query: 48  -------------------DRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYA 88
                              + N V+W+ +++GY  +G+  EA  +F++M+  G   N   
Sbjct: 329 IGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVT 388

Query: 89  LGSVLRACQECGPSGFKFGMQVHC------LVLKSNQTFDGL-VSNVLIAMYGSCLESTD 141
           L S+L  C   G      G + HC      L L  N   D L V N LI MY  C +S  
Sbjct: 389 LVSLLSGCASAGT--LLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKC-KSPK 445

Query: 142 CARRIFEEIETRD--LISWNSIISVYSQRGDTISVFKLFSRM-QREGFRYSLKPNEYTFG 198
            AR +F+ I  +D  +++W  +I   +Q G+     +LFS+M Q + F   + PN +T  
Sbjct: 446 AARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNF---VMPNAFTIS 502

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSD-LYVGSALVSGFARLGNFYYARKIFEQM 257
             + A   + L      +QI A V +    S  L+V + L+  +++ G+   AR +F+ M
Sbjct: 503 CALMAC--ARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNM 560

Query: 258 IQKNVVSMNGLMEG---RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC---GTIDDSR 311
            Q+N VS   LM G     +G+E            +V  G   V +   C   G +D   
Sbjct: 561 HQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGI 620

Query: 312 SVFR-----FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
           + F      F +   +  +  M+  L + G  +EA+     +R   +  +    ++ LS+
Sbjct: 621 NYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAME---LIRGMPMKPTPAVWVALLSA 677

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           C     + LG+    + L+L   +D S +  L ++YA+A       ++ +LM
Sbjct: 678 CRVYANVELGEYAANQLLELESGNDGSYT-LLSNIYANARCWKDVARIRYLM 728


>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
 gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/659 (38%), Positives = 377/659 (57%), Gaps = 37/659 (5%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           K++H  +         ++G  L+  YA CG    +R VF  M  ++ V +N MI     N
Sbjct: 38  KKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNN 97

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
             Y++ ++ F  M   G    N++    L +C+    +  G  IHG+ LK+GLD ++ V 
Sbjct: 98  HRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVG 157

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           N L+++Y   G L    +VF  M   D VSWNS++  +A +     +A++   +M   G 
Sbjct: 158 NGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRF-DDALEICREMEDYGQ 216

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            P+G T  +++ A                     VAN T+ EN L             EK
Sbjct: 217 KPDGCTMASLMPA---------------------VAN-TSSENVLY-----------VEK 243

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           IF  + ER++ +SWN MI  Y+ N L  +A++L   M +     D  TFA+VL AC  ++
Sbjct: 244 IFVNL-ERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLS 302

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            L  G  +H    +  L  ++++ ++L+DMY++CG +D A R FD M  R+V SW S+IS
Sbjct: 303 ALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLIS 362

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
            Y   G G  A+ LF++M   G  PD + FV +LSACSH+GL+DEG  +FK M+  Y + 
Sbjct: 363 AYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRIT 422

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           P++E ++C+VDLLGRAG +D+    I +MPI PN  +W T+L +C        ++G  AA
Sbjct: 423 PRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSC--RVFTNMDIGILAA 480

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
           + L ++ P+ +  YVLL+N+YA  G+W++V + R  MK  +++K  G S V + + VH F
Sbjct: 481 DNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTF 540

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
           +AGD SHP+   IYE+L  L  KM++ GYVP+T  AL D+E E KE  ++ HSEK+A+ F
Sbjct: 541 LAGDTSHPQSKEIYEELGVLVAKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVF 600

Query: 876 VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            L    +  IRI KNLRVCGDCH A K ISKIV REI++RD+NRFHHF DG CSCGDYW
Sbjct: 601 ALLNTQEYQIRITKNLRVCGDCHIAAKLISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 199/420 (47%), Gaps = 25/420 (5%)

Query: 26  LINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLN 85
           L+  Y   G+     K+FDEM DRN V +  ++  Y +    ++   +F+EMV  GF  +
Sbjct: 59  LMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPD 118

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC--- 142
            Y    VL+AC  C     ++G+ +H  VLK    F+  V N LIAMYG C     C   
Sbjct: 119 NYTYPCVLKACS-CS-ENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKC----GCLFE 172

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           ARR+F+E+  +D++SWNS+++ Y+         ++   M+     Y  KP+  T  SL+ 
Sbjct: 173 ARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMED----YGQKPDGCTMASLMP 228

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLS-----DLYVGSALVSGFARLG-NFYYARKIFEQ 256
           A  ++       +++I   +++  L+S      +Y+ ++L +    L       R   + 
Sbjct: 229 AVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDA 288

Query: 257 MIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
           +   +V+   G +     G+ +H Y+ +  L   + + N L++MYA+CG +DD++ VF  
Sbjct: 289 ITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDR 348

Query: 317 MIGKDSVSWNTMIS--GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
           M  +D  SW ++IS  G+   GC   A+  F  M   G    + + ++ LS+C+  G + 
Sbjct: 349 MKFRDVASWTSLISAYGMTGQGC--NAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLD 406

Query: 375 LGQQIHGEGL-KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            G+    +      +   +     L+ L   AG +     +   MP E ++  W +++ +
Sbjct: 407 EGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSS 466


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/716 (35%), Positives = 413/716 (57%), Gaps = 26/716 (3%)

Query: 237 LVSGFARLGNF-----YYARKIFEQMIQKN---VVSMNGLMEGR--RKGKEVHGYLIRSG 286
           +V+ FAR G++     YY R + E +       VV++      +  ++G+ +H  ++ + 
Sbjct: 29  IVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQ 88

Query: 287 L--FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI-- 342
           L  FD++ +G  L+ MYA+C  ++ +R  F  M  K  V+WN +I+G  +NG +  A+  
Sbjct: 89  LLEFDII-LGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKI 147

Query: 343 -MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
             +  +   +G+     +  S L +C+ +G I  G++I    +  G  SD  V NAL+++
Sbjct: 148 YQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINM 207

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y+  G L    KVF  +   D ++WN++I  +A   A  ++A++ +  M      PN VT
Sbjct: 208 YSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGA-ATQALELFQRMGPNDPKPNVVT 266

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE-MDDCEKIFARM 520
           FI +L A ++    + G  +H +V ++   ++  I N LL+ Y KC   +++  ++F R+
Sbjct: 267 FIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERL 326

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
              RD ++WN +I  Y+       A+++   M       +  T + VLSACA +    +G
Sbjct: 327 -RTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQG 385

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
             VHA       + DVV+ ++L++MY++CG +D     F  +  +++ SW+++I+ YA+H
Sbjct: 386 KAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQH 445

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
           GH    L  F ++  +G   D VT V  LSACSH G++ EG + F SM   +GL P    
Sbjct: 446 GHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRH 505

Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
           F CMVDLL RAG L+  E  I+ MP  P+++ W ++L  C   N   T+   + A+ LFE
Sbjct: 506 FLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHN--DTKRAARVADKLFE 563

Query: 761 MEPQNAVNYV-LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           +E ++  + V LL+N+YA  G+W+DV   RK       +K  GCS++ + D VH FVAGD
Sbjct: 564 LESEDEHSTVTLLSNVYAEAGRWDDV---RKTRNRRAARKNPGCSYIEINDTVHEFVAGD 620

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLT 878
           +SHPE++LI  ++K L+++M+DAGYVP  +  L +++ E KE ++ YHSEK+A+A+ +++
Sbjct: 621 KSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLIS 680

Query: 879 RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
                P+ I+KNLR C DCH+A KFIS+IVGR+IV+RDS RFHHF +G CSC DYW
Sbjct: 681 TPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 207/387 (53%), Gaps = 7/387 (1%)

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
           MY KCG++ D+ +VF  +   +SVSW  +++   +NG Y EA+  +  M  +GL      
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLG-LDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
            +  +  C+S   +  GQ +H   L+   L+ D+ +  AL+++YA    L    K F  M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDM---RRAGWSPNGVTFINILAAASSFSMG 475
            +   V+WN++I  ++ +      A+K Y DM      G  P+ +TF + L A S     
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRG-ALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDI 179

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             G ++ A+ +    A+++ ++NAL++ Y KCG ++   K+F R+ + RD ++WN+MISG
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRL-KNRDVIAWNTMISG 238

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
           Y       +A+ L   M     + +  TF  +L+AC ++  LE+G  +H        E D
Sbjct: 239 YAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESD 298

Query: 596 VVIGSALVDMYSKC-GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           +VIG+ L++MY+KC   ++ A + F+ +  R+V +WN +I  Y ++G    AL +F QM+
Sbjct: 299 LVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQ 358

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEG 681
           L+   P+ +T   VLSAC+  G   +G
Sbjct: 359 LENVAPNEITLSNVLSACAVLGAKRQG 385



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 138/557 (24%), Positives = 263/557 (47%), Gaps = 52/557 (9%)

Query: 29  VYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYA 88
           +Y + G +A A  +F  +   NSVSW  IV+ +   G   EA   ++ MV  G   +   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSN-QTFDGLVSNVLIAMYGSCLESTDCARRIF 147
               +  C        K G  +H ++L++    FD ++   LI MY  C    + AR+ F
Sbjct: 61  FVVAIGVCS--SSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARC-RDLELARKTF 117

Query: 148 EEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS 207
           +E+  + L++WN++I+ YS+ GD     K++  M  +     +KP+  TF S + A   S
Sbjct: 118 DEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPE-GMKPDAITFSSALYAC--S 174

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
           V+      ++I A    +G  SD  V +AL++ +++ G+   ARK+F+++  ++V++ N 
Sbjct: 175 VVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNT 234

Query: 268 LMEGRRK-----------------------------------------GKEVHGYLIRSG 286
           ++ G  K                                         G+ +H  +   G
Sbjct: 235 MISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHG 294

Query: 287 LFDMVAVGNGLVNMYAKC-GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
               + +GN L+NMY KC  +++++R VF  +  +D ++WN +I    Q G  ++A+  F
Sbjct: 295 YESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIF 354

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             M+ + +  +  +L + LS+CA LG    G+ +H         +DV + N+L+++Y   
Sbjct: 355 KQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRC 414

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
           G L   + VF  + +   VSW+++I A+A         ++++ ++ + G + + VT ++ 
Sbjct: 415 GSLDDTVGVFAAIRDKSLVSWSTLIAAYA-QHGHSRTGLEHFWELLQEGLAADDVTMVST 473

Query: 466 LAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           L+A S   M K G Q    ++  + +A +      ++    + G ++  E +   M    
Sbjct: 474 LSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLP 533

Query: 525 DEVSWNSMISG-YIHNE 540
           D V+W S++SG  +HN+
Sbjct: 534 DAVAWTSLLSGCKLHND 550



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 156/571 (27%), Positives = 260/571 (45%), Gaps = 91/571 (15%)

Query: 2   KDAKLFHLQILKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           K  +L H  IL+     +D+ L   LI +Y R  DL  A K FDEM  +  V+W  +++G
Sbjct: 75  KQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAG 134

Query: 61  YTHKGMSNEACKMFKEMVRA---GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
           Y+  G    A K++++MV     G   +     S L AC   G      G ++    + S
Sbjct: 135 YSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVG--DISQGREIEARTVAS 192

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
               D +V N LI MY  C  S + AR++F+ ++ RD+I+WN++IS Y+++G      +L
Sbjct: 193 GYASDSIVQNALINMYSKC-GSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALEL 251

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F RM         KPN  TF  L+TA  +  L      + I   VK+ G  SDL +G+ L
Sbjct: 252 FQRMGPN----DPKPNVVTFIGLLTACTN--LEDLEQGRAIHRKVKEHGYESDLVIGNVL 305

Query: 238 VSGFARL-GNFYYARKIFEQMIQKNVVSMN------------------------------ 266
           ++ + +   +   AR++FE++  ++V++ N                              
Sbjct: 306 LNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPN 365

Query: 267 -----------GLMEGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVF 314
                       ++  +R+GK VH  LI SG     V + N L+NMY +CG++DD+  VF
Sbjct: 366 EITLSNVLSACAVLGAKRQGKAVHA-LIASGRCKADVVLENSLMNMYNRCGSLDDTVGVF 424

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             +  K  VSW+T+I+   Q+G     + +F  + ++GL + + +++STLS+C+      
Sbjct: 425 AAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACS------ 478

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
                HG  LK G+ S        LS+  D G L+   + F  M     V   S  G   
Sbjct: 479 -----HGGMLKEGVQS-------FLSMVGDHG-LAPDYRHFLCM-----VDLLSRAGRLE 520

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANET 494
            +E L+        DM    + P+ V + ++L+     +  K   +V  ++ +    +E 
Sbjct: 521 AAENLIH-------DM---PFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEH 570

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           +    L + Y + G  DD  K   R + R++
Sbjct: 571 STVTLLSNVYAEAGRWDDVRKTRNRRAARKN 601



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 98/248 (39%), Gaps = 51/248 (20%)

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
           MY KCG +  A   F  +   N  SW  +++ +AR+GH  +AL  + +M L+G  PD   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 665 FVGVLSACS-----------HAGLVDEGFKHF-----KSMSQVYGLIPQLEQFSCMVDLL 708
           FV  +  CS           HA +++     F      ++  +Y     LE      D +
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 709 GRA-------------------GELDKIEEFINKMP--ITPNSLIWRTVLGACCR----A 743
           G+                    G L   ++ ++K P  + P+++ + + L AC      +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
             R+ E    A+    +   QNA     L NMY+  G  E   K    +K  +V      
Sbjct: 181 QGREIEARTVASGYASDSIVQNA-----LINMYSKCGSLESARKVFDRLKNRDV-----I 230

Query: 804 SWVTMKDG 811
           +W TM  G
Sbjct: 231 AWNTMISG 238


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 252/636 (39%), Positives = 390/636 (61%), Gaps = 19/636 (2%)

Query: 312 SVFRFMIGKDSV-SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
           ++F   + K +V SWN++I+ L ++G   EA+  F +MR+  L  +  +    + SC++L
Sbjct: 106 TLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSAL 165

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
             +  G+Q H + L  G + D+ VS+AL+ +Y+  G L     +F  +   + VSW S+I
Sbjct: 166 LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 225

Query: 431 GAFADSE----ALVSEAVKYYLDMRRAGWSPNG------VTFINILAAASSFSMGKLGHQ 480
             +  ++    AL+    K +L +  +G   +G      +  +++L+A S  S   +   
Sbjct: 226 TGYVQNDDAHRALL--LFKEFL-VEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG 282

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           VH  +IK     +  +EN L+  Y KCGE+    ++F  M+ER D +SWNS+I+ Y  N 
Sbjct: 283 VHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAER-DVISWNSIIAVYAQNG 341

Query: 541 LLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
           +  ++M +   M++ G+   +  T + VL ACA   +   G  +H   ++  LE +V +G
Sbjct: 342 MSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVG 401

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           ++++DMY KCG+++ A + FD M  +NV SW++M++GY  HGH  +AL +F +M + G  
Sbjct: 402 TSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVK 461

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           P+++TFV VL+ACSHAGL++EG+  FK+MS  + + P +E + CMVDLLGRAG L +  +
Sbjct: 462 PNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFD 521

Query: 720 FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASG 779
            I  M + P+ ++W  +LGA CR + +  +LG  +A  LFE++P+N   YVLL+N+YA  
Sbjct: 522 LIKGMKLRPDFVVWGALLGA-CRMH-KNVDLGEISARKLFELDPKNCGYYVLLSNIYADA 579

Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
           G+WEDV + R  MK + + K  G S V +K  VHVF+ GD  HP+ + IYE L++L+ K+
Sbjct: 580 GRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKL 639

Query: 840 RDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCH 898
           ++ GYVP     L D+  E KE ++  HSEK+AVAF ++       I I+KNLRVCGDCH
Sbjct: 640 QEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCH 699

Query: 899 SAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +A KFISKIV REIV+RDS RFHHF DG CSCGDYW
Sbjct: 700 TAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 225/473 (47%), Gaps = 56/473 (11%)

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQM----IQKN-------VVSMNGLMEGRRKGKE 277
           ++++  +++++  AR G+   A + F  M    ++ N       + S + L++    G++
Sbjct: 115 TNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLD-LHSGRQ 173

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
            H   +  G    + V + LV+MY+KCG + D+R++F  +  ++ VSW +MI+G  QN  
Sbjct: 174 AHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDD 233

Query: 338 YEEAIMNF-------CAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
              A++ F            DG +  +  +++S LS+C+ +    + + +HG  +K G +
Sbjct: 234 AHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFE 293

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
            D+ V N L+  YA  G L    +VF  M E D +SWNS+I  +A +  + +E+++ +  
Sbjct: 294 GDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQN-GMSTESMEIFHR 352

Query: 450 MRRAG-WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
           M + G  + N VT   +L A +     +LG  +H QVIK  + +   +  +++  Y KCG
Sbjct: 353 MVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCG 412

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
           +++   K F RM E+  + SW++M++GY  +    +A+ + + M   G + ++ TF +VL
Sbjct: 413 KVEMARKAFDRMREKNVK-SWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVL 471

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
           +AC+    LE G                                   S  FD+ P   V 
Sbjct: 472 AACSHAGLLEEGWH----------------------------WFKAMSHEFDVEP--GVE 501

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
            +  M+    R G+  +A  L   MKL    PD V +  +L AC     VD G
Sbjct: 502 HYGCMVDLLGRAGYLKEAFDLIKGMKLR---PDFVVWGALLGACRMHKNVDLG 551



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 144/273 (52%), Gaps = 18/273 (6%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q L  GF  D+F+ + L+++Y + G+L  A  LFDE+  RN VSW  +++GY     +
Sbjct: 175 HQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDA 234

Query: 68  NEACKMFKEMV--------RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           + A  +FKE +             ++  A+ SVL AC          G  VH  ++K   
Sbjct: 235 HRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG--VHGFLIKRGF 292

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D  V N L+  Y  C E    +RR+F+ +  RD+ISWNSII+VY+Q G +    ++F 
Sbjct: 293 EGDLGVENTLMDAYAKCGE-LGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFH 351

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ-ILAMVKKAGLLSDLYVGSALV 238
           RM ++G    +  N  T  +++ A      SGS  L + I   V K GL S+++VG++++
Sbjct: 352 RMVKDG---EINYNAVTLSAVLLACAH---SGSQRLGKCIHDQVIKMGLESNVFVGTSII 405

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             + + G    ARK F++M +KNV S + ++ G
Sbjct: 406 DMYCKCGKVEMARKAFDRMREKNVKSWSAMVAG 438



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 191/450 (42%), Gaps = 54/450 (12%)

Query: 32  RVGDLASASKLFDEMPDRNSV-SWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
           R  +  + + LF++  D+ +V SW  +++     G S EA + F  M +     NR    
Sbjct: 97  RYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFP 156

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
             +++C          G Q H   L      D  VS+ L+ MY  C E  D AR +F+EI
Sbjct: 157 CAIKSCS--ALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRD-ARTLFDEI 213

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFSR--MQREGFRYSLKPNEYTFGSLITAAYSSV 208
             R+++SW S+I+ Y Q  D      LF    ++  G     +        +   +  S 
Sbjct: 214 SHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSR 273

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
           +S   + + +   + K G   DL V + L+  +A+ G    +R++F+ M +++V+S N +
Sbjct: 274 VSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSI 333

Query: 269 ME------------------------------------------GRRKGKEVHGYLIRSG 286
           +                                            +R GK +H  +I+ G
Sbjct: 334 IAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMG 393

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
           L   V VG  +++MY KCG ++ +R  F  M  K+  SW+ M++G   +G  +EA+  F 
Sbjct: 394 LESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFY 453

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNALLSLYADA 405
            M   G+  +  + +S L++C+  G +  G         +  ++  V     ++ L   A
Sbjct: 454 EMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRA 513

Query: 406 GYLSRC---LKVFFLMPEHDQVSWNSVIGA 432
           GYL      +K   L P  D V W +++GA
Sbjct: 514 GYLKEAFDLIKGMKLRP--DFVVWGALLGA 541



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 146/313 (46%), Gaps = 23/313 (7%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K GF  D+ + NTL++ Y + G+L  + ++FD M +R+ +SW  I++ Y   GMS
Sbjct: 284 HGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMS 343

Query: 68  NEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            E+ ++F  MV+ G +  N   L +VL AC   G    + G  +H  V+K     +  V 
Sbjct: 344 TESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQ--RLGKCIHDQVIKMGLESNVFVG 401

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
             +I MY  C    + AR+ F+ +  +++ SW+++++ Y   G      ++F  M   G 
Sbjct: 402 TSIIDMYCKC-GKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAG- 459

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVG----SALVSGFA 242
              +KPN  TF S++ A      S + LL++     K      D+  G      +V    
Sbjct: 460 ---VKPNYITFVSVLAAC-----SHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLG 511

Query: 243 RLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG---- 296
           R G    A  + + M ++ + V    L+   R  K V  G +    LF++     G    
Sbjct: 512 RAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVL 571

Query: 297 LVNMYAKCGTIDD 309
           L N+YA  G  +D
Sbjct: 572 LSNIYADAGRWED 584



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 54/97 (55%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H Q++K G   +VF+  ++I++Y + G +  A K FD M ++N  SW+ +V+GY  
Sbjct: 382 GKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGM 441

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G + EA ++F EM  AG   N     SVL AC   G
Sbjct: 442 HGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAG 478


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/662 (37%), Positives = 388/662 (58%), Gaps = 8/662 (1%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           +++H  +I SGL     + N L+N Y  CG + D++ +F     K+ VSW  +ISGL +N
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKN 100

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
            C+ EAI  F  M       +  ++ S L + A+LG I + + +H   ++ G + +V V 
Sbjct: 101 DCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
            AL+ +Y+  G +    ++F  M E + V+WN+++  ++D      EA+  +  MRR G 
Sbjct: 161 TALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSD-HGFSEEAIDLFNLMRRKGL 219

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
             +  T ++++ A+ S    ++G  +H  +I+    N+  I+ AL+  Y     +DD  +
Sbjct: 220 LVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHR 279

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ-RGQRLDHFTFATVLSACASV 574
           +F+ MS + D  +W  M++G+       +A+     M+  +  +LD      +LS+C+  
Sbjct: 280 VFSEMSVK-DVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHS 338

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
             L++G  VHA  ++ C   ++ +GSA++DMY+ CG ++ A RFF  M  ++V  WN+MI
Sbjct: 339 GALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMI 398

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
           +G   +G+G  A+ LF QMK  G  PD  TFV VL ACSHAG+V EG + F  M +   +
Sbjct: 399 AGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHV 458

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRK 753
           IP L+ ++C++D+LGRAG+LD    FIN MP  P+  ++ T+LGAC    N +   LG +
Sbjct: 459 IPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIK---LGHE 515

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
            +  +FEMEP +A  YVLL+NMYA  G WE V   R +++   +KK+ G S + +   ++
Sbjct: 516 ISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIY 575

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
            F+AG++ HP+   I   LK L  K++ AGYVP T   L D+  + K+D++ +HSEK+A+
Sbjct: 576 TFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAI 635

Query: 874 AFVLTRN-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           AF L R   +  IRI KNLR C DCH+A KF+SK+ GR +V++D+NRFH F DG CSC D
Sbjct: 636 AFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRD 695

Query: 933 YW 934
           YW
Sbjct: 696 YW 697



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 227/478 (47%), Gaps = 30/478 (6%)

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD------------LYVGSAL 237
           LKP +     +IT   S +   ++L   ++      GLL+D            +   + L
Sbjct: 37  LKPLQQIHAQIIT---SGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTIL 93

Query: 238 VSGFARLGNFYYARKIFEQMI----QKNVVSMNGLMEGR------RKGKEVHGYLIRSGL 287
           +SG A+   F  A  +F +MI    + N V+++ ++         R  K VH + +R G 
Sbjct: 94  ISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
              V V   LV+MY+K G +  +R +F  M  ++ V+WN ++SG   +G  EEAI  F  
Sbjct: 154 EGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNL 213

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           MRR GL+   ++++S + +  S+G + +G  IHG  ++ G ++D  +  AL+ +Y     
Sbjct: 214 MRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNC 273

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR-AGWSPNGVTFINIL 466
           +    +VF  M   D  +W  ++  F+        A+K++  M        + +  + IL
Sbjct: 274 VDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHW-DRAIKHFNKMLGIQNLKLDSIALMGIL 332

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           ++ S     + G +VHA  IK   AN   + +A++  Y  CG ++D ++ F  M E +D 
Sbjct: 333 SSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGE-KDV 391

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           V WN+MI+G   N     A++L   M   G   D  TF +VL AC+    +  G+++   
Sbjct: 392 VCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYH 451

Query: 587 GVRACLEFDVVIGSA-LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR-HGH 642
            V+       +   A ++D+  + G++D A  F + MP +  +   S + G  R HG+
Sbjct: 452 MVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGN 509



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 194/424 (45%), Gaps = 59/424 (13%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H QI+  G  ++ FL N+L+N YV  G LA A ++F   P +N VSW  ++SG 
Sbjct: 38  KPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGL 97

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                  EA  +F+EM+   F  N   + SVL A    G    +    VHC  ++     
Sbjct: 98  AKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGL--IRIAKSVHCFWVRGGFEG 155

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V   L+ MY S       AR++FE +  R++++WN+I+S YS  G +     LF+ M
Sbjct: 156 NVFVETALVDMY-SKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLM 214

Query: 182 QREGFRYSLKPNEYTFGSLITAAYS----SVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           +R+G    L  + YT  SLI A+ S     V +G      I   + + G  +D ++ +AL
Sbjct: 215 RRKG----LLVDFYTIMSLIPASLSVGCLQVGTG------IHGFIIRTGYENDKHIKTAL 264

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVS----MNGLMEGR--------------------- 272
           +  +        A ++F +M  K+V +    + G   GR                     
Sbjct: 265 MDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLD 324

Query: 273 -----------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                            ++G+ VH   I++   + + VG+ +++MYA CG ++D++  F 
Sbjct: 325 SIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFY 384

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M  KD V WN MI+G   NG   +AI  F  M+  GL     + +S L +C+  G +  
Sbjct: 385 GMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYE 444

Query: 376 GQQI 379
           G QI
Sbjct: 445 GLQI 448


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 284/810 (35%), Positives = 426/810 (52%), Gaps = 96/810 (11%)

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL--- 209
           R +  +N+ I  + Q G+  +  +L    Q+                L T  YSSVL   
Sbjct: 64  RQVTDYNAKILHFCQLGNLENAMELVCMCQK--------------SELETKTYSSVLQLC 109

Query: 210 SGSYLL---QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN 266
           +GS  L   +++ +++K   +  D  +G  LVS +A  G+    R++F+ M +KNV    
Sbjct: 110 AGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNV---- 165

Query: 267 GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK------ 320
                         YL            N +V+ YAK G   +S  +F+ M+ K      
Sbjct: 166 --------------YL-----------WNFMVSEYAKIGDFKESICLFKIMVEKGIEGKR 200

Query: 321 --------------DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
                         D +SWN+MISG   NG  E  +  +  M   G+     ++IS L  
Sbjct: 201 PESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVG 260

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSW 426
           CA+ G + LG+ +H   +K   +  ++ SN LL +Y+  G L   L+VF  M E + VSW
Sbjct: 261 CANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
            S+I  +   +     A++    M + G   + V   +IL A +       G  VH  + 
Sbjct: 321 TSMIAGYT-RDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIK 379

Query: 487 KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAM 546
             N+ +   + NAL+  Y KCG MD    +F+ M   +D +SWN+MI      EL P   
Sbjct: 380 ANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMV-VKDIISWNTMIG-----ELKP--- 430

Query: 547 NLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMY 606
                        D  T A +L ACAS++ LERG E+H   +R     D  + +ALVD+Y
Sbjct: 431 -------------DSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLY 477

Query: 607 SKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFV 666
            KCG +  A   FD++P +++ SW  MISGY  HG+G++A+  F++M+  G  PD V+F+
Sbjct: 478 VKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFI 537

Query: 667 GVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPI 726
            +L ACSH+GL+++G++ F  M   + + P+LE ++CMVDLL R G L K  EFI  +PI
Sbjct: 538 SILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPI 597

Query: 727 TPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVA 786
            P++ IW  +L  C        EL  K A  +FE+EP+N   YVLLAN+YA   KWE+V 
Sbjct: 598 APDATIWGALLCGC--RIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVK 655

Query: 787 KARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE-SHPEKDLIYEKLKELNQKMRDAGYV 845
           + R+ + +  ++K  GCSW+ +K  V++FV+G+  SHP    I   LK++ +KM++ GY 
Sbjct: 656 RMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYF 715

Query: 846 PQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFI 904
           P+TK+AL + +   KE  +  HSEK+A+AF +L    +  +R+ KNLRVCGDCH   KF+
Sbjct: 716 PKTKYALINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKFM 775

Query: 905 SKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           SK   REIVLRDSNRFHHF +G CSC  +W
Sbjct: 776 SKETRREIVLRDSNRFHHFKNGYCSCRGFW 805



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 198/400 (49%), Gaps = 53/400 (13%)

Query: 19  DVFLCNTLINVYVRVGDLA--------------------SASKLFDEMPDRNSVSWACIV 58
           +V+L N +++ Y ++GD                      SAS+LFD++ DR+ +SW  ++
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMI 223

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
           SGY   G++    +++K+M+  G  ++   + SVL  C   G      G  VH L +KS 
Sbjct: 224 SGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGT--LSLGKAVHSLAIKS- 280

Query: 119 QTFDGLV--SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
            TF+  +  SN L+ MY  C +  D A R+FE++  R+++SW S+I+ Y++ G +    +
Sbjct: 281 -TFERRINFSNTLLDMYSKCGD-LDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIR 338

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
           L  +M++EG +  +     T   L   A S  L      + +   +K   + S+L+V +A
Sbjct: 339 LLQQMEKEGVKLDVVA---TTSILHACARSGSLDNG---KDVHDYIKANNMESNLFVCNA 392

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGL--------------------MEGRRKGK 276
           L+  + + G+   A  +F  M+ K+++S N +                    +    +GK
Sbjct: 393 LMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSALERGK 452

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           E+HGY++R+G      V N LV++Y KCG +  +R +F  +  KD VSW  MISG   +G
Sbjct: 453 EIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHG 512

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
              EAI  F  MR  G+     S IS L +C+  G +  G
Sbjct: 513 YGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 129/533 (24%), Positives = 235/533 (44%), Gaps = 114/533 (21%)

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           SVL+ C   G      G +VH ++  +N   D ++   L+++Y +C +  +  RR+F+ +
Sbjct: 104 SVLQLCA--GSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKE-GRRVFDTM 160

Query: 151 ETRDLISWNSIISVYSQRGD---TISVFKLFSRMQREGFRYSLKPNEY---------TFG 198
           E +++  WN ++S Y++ GD   +I +FK+      EG R       +         ++ 
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWN 220

Query: 199 SLITAAYSSVLS--GSYLLQQILAM---VKKAGLLS---------DLYVGSA-------- 236
           S+I+   S+ L+  G  + +Q++ +   V  A ++S          L +G A        
Sbjct: 221 SMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280

Query: 237 -----------LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------- 274
                      L+  +++ G+   A ++FE+M ++NVVS   ++ G  +           
Sbjct: 281 TFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLL 340

Query: 275 ------------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
                                         GK+VH Y+  + +   + V N L++MY KC
Sbjct: 341 QQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKC 400

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G++D + SVF  M+ KD +SWNTMI  L  +                     + ++   L
Sbjct: 401 GSMDGANSVFSTMVVKDIISWNTMIGELKPD---------------------SRTMACIL 439

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +CASL  +  G++IHG  L+ G  SD  V+NAL+ LY   G L     +F ++P  D V
Sbjct: 440 PACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLV 499

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           SW  +I  +       +EA+  + +MR AG  P+ V+FI+IL A S   + + G +    
Sbjct: 500 SWTVMISGYG-MHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-Y 557

Query: 485 VIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           ++K +   E  +E+   ++    + G +    +    +    D   W +++ G
Sbjct: 558 IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 132/278 (47%), Gaps = 34/278 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H   +K  F   +   NTL+++Y + GDL  A ++F++M +RN VSW  +++GYT 
Sbjct: 270 GKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 329

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G S+ A ++ ++M + G  L+  A  S+L AC   G      G  VH  +  +N   + 
Sbjct: 330 DGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSG--SLDNGKDVHDYIKANNMESNL 387

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V N L+ MY  C  S D A  +F  +  +D+ISWN++I                     
Sbjct: 388 FVCNALMDMYTKC-GSMDGANSVFSTMVVKDIISWNTMIG-------------------- 426

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
                 LKP+  T   ++ A  S  LS     ++I   + + G  SD +V +ALV  + +
Sbjct: 427 -----ELKPDSRTMACILPACAS--LSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY 281
            G    AR +F+ +  K++VS   ++ G      +HGY
Sbjct: 480 CGVLGLARLLFDMIPSKDLVSWTVMISGY----GMHGY 513



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 146/344 (42%), Gaps = 44/344 (12%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H  I  +    ++F+CN L+++Y + G +  A+ +F  M  ++ +SW  ++ G  
Sbjct: 370 NGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMI-GEL 428

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                  AC                    +L AC     S  + G ++H  +L++  + D
Sbjct: 429 KPDSRTMAC--------------------ILPACASL--SALERGKEIHGYILRNGYSSD 466

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V+N L+ +Y  C      AR +F+ I ++DL+SW  +IS Y   G        F+ M+
Sbjct: 467 RHVANALVDLYVKC-GVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMR 525

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ----ILAMVKKAGLLSDLYVGSALV 238
             G    ++P+E +F S++ A      S S LL+Q       M     +   L   + +V
Sbjct: 526 DAG----IEPDEVSFISILYAC-----SHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMV 576

Query: 239 SGFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG 296
              +R GN   A +  E + I  +      L+ G R   ++     +   +F++     G
Sbjct: 577 DLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTG 636

Query: 297 ----LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
               L N+YA+    ++ + + R  IGK  +  N   S ++  G
Sbjct: 637 YYVLLANIYAEAEKWEEVKRM-REKIGKKGLRKNPGCSWIEIKG 679


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 256/733 (34%), Positives = 411/733 (56%), Gaps = 69/733 (9%)

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
           L++ + + G    AR++F+     N+ + N L+                           
Sbjct: 47  LLTAYGKAGRHARARRVFDATPHPNLFTYNALL--------------------------- 79

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG--LM 354
             +  A    +DD  S+F  M  +D+VS+N +I+G    G +  A+  +  + R G  + 
Sbjct: 80  --STLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVR 137

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY------- 407
            S  ++ + + + ++LG   LG+Q H + L+LG   +  V + L+ +YA  G        
Sbjct: 138 PSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRV 197

Query: 408 ------------------LSRC------LKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
                             L RC       ++F +M + D ++W +++  F  +  L S+A
Sbjct: 198 FDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQN-GLESQA 256

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           + ++  MR  G + +  TF +IL A  + S  + G Q+HA +I+ +  +   + +AL+  
Sbjct: 257 LNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDM 316

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           Y KC  +   E  F RMS + + +SW ++I GY  N    +A+ +   M + G   D FT
Sbjct: 317 YSKCRSIKPAETAFRRMSCK-NIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFT 375

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
             +V+S+CA++A+LE G + H   + + L   + + +ALV +Y KCG I+ A R FD M 
Sbjct: 376 LGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEML 435

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
             +  SW ++++GYA+ G   + + LF +M      PD VTF+GVLSACS AG V++G  
Sbjct: 436 FHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCS 495

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CR 742
           +F SM + +G++P  + ++CM+DL  R+G L + EEFI +MP+ P+++ W T+L AC  R
Sbjct: 496 YFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLR 555

Query: 743 ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
            +    E+G+ AA  L E++PQN  +YVLL +M+A+ G W  VA+ R+ M++ +VKKE G
Sbjct: 556 GD---MEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPG 612

Query: 803 CSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKED 862
           CSW+  K+ VH+F A D+SHP    IYEKL+ LN KM + GY P     L D+    K  
Sbjct: 613 CSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVH 672

Query: 863 LVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFH 921
           +VS+HSEK+A+AF ++    ++PIRI+KNLRVC DCH+A K ISKI GR+I++RD+ RFH
Sbjct: 673 MVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVRFH 732

Query: 922 HFNDGKCSCGDYW 934
            F++G CSCGD+W
Sbjct: 733 KFSNGVCSCGDFW 745



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 135/524 (25%), Positives = 259/524 (49%), Gaps = 53/524 (10%)

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           T++ L+S +    +   L+  D    +F  +  RD +S+N++I+ +S  G      +L+ 
Sbjct: 74  TYNALLSTL---AHARLLDDMDS---LFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYH 127

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            + R G   S++P+  T  +++ AA  S L    L +Q    + + G   + +VGS LV 
Sbjct: 128 TLLRAG--SSVRPSRITMSAMVMAA--SALGDRALGRQFHCQILRLGFGVNAFVGSPLVG 183

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVN 299
            +A++G    A+++F++M  KNVV  N ++ G          L+R               
Sbjct: 184 MYAKMGLIGDAKRVFDEMDGKNVVMYNTMITG----------LLR--------------- 218

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
               C  ++++R +F  M  +D ++W TM++G  QNG   +A+  F  MR  G+    ++
Sbjct: 219 ----CKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYT 274

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
             S L++C +L  +  G+QIH   ++   D +V V +AL+ +Y+    +      F  M 
Sbjct: 275 FGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMS 334

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             + +SW ++I  +  +     EAV+ + +M+R G  P+  T  +++++ ++ +  + G 
Sbjct: 335 CKNIISWTALIVGYGQN-GCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGA 393

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           Q H   +   + +  T+ NAL++ YGKCG ++D  ++F  M    D+VSW ++++GY   
Sbjct: 394 QFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEML-FHDQVSWTALVTGYAQF 452

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
               + ++L   M+ +  + D  TF  VLSAC+    +E+G     C     ++ D  I 
Sbjct: 453 GRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKG-----CSYFHSMQKDHGIV 507

Query: 600 ------SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISG 636
                 + ++D+YS+ GR+  A  F   MP+  +   W +++S 
Sbjct: 508 PIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSA 551



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/491 (23%), Positives = 208/491 (42%), Gaps = 87/491 (17%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           ++F  N L++       L     LF  M  R++VS+  +++G++  G    A +++  ++
Sbjct: 71  NLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLL 130

Query: 79  RAGFLL--NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
           RAG  +  +R  + +++ A    G      G Q HC +L+     +  V + L+ MY   
Sbjct: 131 RAGSSVRPSRITMSAMVMAASALGDRAL--GRQFHCQILRLGFGVNAFVGSPLVGMYAKM 188

Query: 137 ------------------------------LESTDCARRIFEEIETRDLISWNSIISVYS 166
                                          +  + ARR+FE +  RD I+W ++++ ++
Sbjct: 189 GLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFT 248

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKK 224
           Q G        F RM+ +G    +  ++YTFGS++TA  A S++  G    +QI A + +
Sbjct: 249 QNGLESQALNFFRRMRFQG----IAIDQYTFGSILTACGALSALEQG----KQIHAYIIR 300

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------ 272
                +++VGSALV  +++  +   A   F +M  KN++S   L+ G             
Sbjct: 301 THYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRV 360

Query: 273 -----------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
                                         +G + H   + SGL   + V N LV +Y K
Sbjct: 361 FSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGK 420

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           CG+I+D+  +F  M+  D VSW  +++G  Q G  +E I  F  M    +     + I  
Sbjct: 421 CGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGV 480

Query: 364 LSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH- 421
           LS+C+  G++  G    H      G+         ++ LY+ +G L    +    MP H 
Sbjct: 481 LSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHP 540

Query: 422 DQVSWNSVIGA 432
           D + W +++ A
Sbjct: 541 DAIGWGTLLSA 551



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 127/260 (48%), Gaps = 16/260 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  I++  +  +VF+ + L+++Y +   +  A   F  M  +N +SW  ++ GY
Sbjct: 289 EQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGY 348

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G S EA ++F EM R G   + + LGSV+ +C     +  + G Q HCL L S    
Sbjct: 349 GQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANL--ASLEEGAQFHCLALVSGLMH 406

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              VSN L+ +YG C  S + A R+F+E+   D +SW ++++ Y+Q G       LF +M
Sbjct: 407 YITVSNALVTLYGKC-GSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKM 465

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGL--LSDLYVGSAL 237
                   +KP+  TF  +++A   +  V  G        +M K  G+  + D Y  + +
Sbjct: 466 ----LAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFH---SMQKDHGIVPIDDHY--TCM 516

Query: 238 VSGFARLGNFYYARKIFEQM 257
           +  ++R G    A +  +QM
Sbjct: 517 IDLYSRSGRLKEAEEFIKQM 536



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 65/252 (25%)

Query: 494 TTIENALLSCYGKCGE-------------------------------MDDCEKIFARMSE 522
           T + N LL+ YGK G                                +DD + +FA M++
Sbjct: 41  THLLNHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQ 100

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ--RLDHFTFATVLSACASVATLERG 580
            RD VS+N++I+G+       +A+ L   +++ G   R    T + ++ A +++     G
Sbjct: 101 -RDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALG 159

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSK-------------------------------C 609
            + H   +R     +  +GS LV MY+K                               C
Sbjct: 160 RQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRC 219

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
             ++ A R F++M  R+  +W +M++G+ ++G   +AL  F +M+  G   D  TF  +L
Sbjct: 220 KMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSIL 279

Query: 670 SACSHAGLVDEG 681
           +AC     +++G
Sbjct: 280 TACGALSALEQG 291



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 11/169 (6%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           FH   L  G  + + + N L+ +Y + G +  A +LFDEM   + VSW  +V+GY   G 
Sbjct: 395 FHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGR 454

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           + E   +F++M+      +      VL AC     +GF   ++  C    S Q   G+V 
Sbjct: 455 AKETIDLFEKMLAKDVKPDGVTFIGVLSACSR---AGF---VEKGCSYFHSMQKDHGIVP 508

Query: 127 -----NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD 170
                  +I +Y       +    I +     D I W +++S    RGD
Sbjct: 509 IDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGD 557


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 278/843 (32%), Positives = 431/843 (51%), Gaps = 81/843 (9%)

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +  N+++  Y   L S   A  +F  +  RD+ SWN+++S Y Q G  +   + F  M+R
Sbjct: 96  ITHNIMMNGYAK-LGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRR 154

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G      PN +TFG  + +     L    +  Q+L ++ K G   D  V + +V  F R
Sbjct: 155 SGDSL---PNAFTFGCAMKSC--GALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVR 209

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
            G   +A K F Q+ +  V   N ++ G                             YAK
Sbjct: 210 CGAVDFASKQFSQIERPTVFCRNSMLAG-----------------------------YAK 240

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
              +D +  +F  M  +D VSWN M+S L Q+G   EA+     M   G+   + +  S+
Sbjct: 241 SYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSS 300

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L++CA L  +  G+Q+H + ++     D  V++A++ LYA  G      +VF  + + + 
Sbjct: 301 LTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNT 360

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSW  +IG F       SE+++ +  MR    + +      I++  S+     L  Q+H+
Sbjct: 361 VSWTVLIGGFLQ-YGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHS 419

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER-------------------- 523
             +K        I N+L+S Y KCG + + E IF+ M ER                    
Sbjct: 420 LSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGK 479

Query: 524 ----------RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL-DHFTFATVLSACA 572
                     R+ ++WN+M+  YI +      + +   M+     + D  T+ T+   CA
Sbjct: 480 AREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCA 539

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
            +   + G ++    V+  L  D  + +A++ MYSKCGRI  A + FD +  +++ SWN+
Sbjct: 540 DMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNA 599

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           MI+GY++HG G +A+ +F  M   G  PD++++V VLS+CSH+GLV EG  +F  + + +
Sbjct: 600 MITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDH 659

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
            + P LE FSCMVDLL RAG L + +  I++MP+ P + +W  +L AC        EL  
Sbjct: 660 NVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSAC--KTHGNNELAE 717

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
            AA  LF+++  ++  Y+LLA +YA  GK  D A+ RK M++  +KK  G SW+ +K+ V
Sbjct: 718 LAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKV 777

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
           HVF A D SHP+   I EKL EL +K+   GYV            ES    + +HSEK+A
Sbjct: 778 HVFKAEDVSHPQVIAIREKLDELMEKIAQLGYV----------RTESLRSEI-HHSEKLA 826

Query: 873 VAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
           VAF ++   + +PI IMKNLR+CGDCH+  K IS + GRE V+RD+ RFHHF  G CSCG
Sbjct: 827 VAFGIMNLPAWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFKGGSCSCG 886

Query: 932 DYW 934
           DYW
Sbjct: 887 DYW 889



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 150/632 (23%), Positives = 272/632 (43%), Gaps = 119/632 (18%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +V   N ++N Y ++G L+ A +LF  MP R+  SW  ++SGY   G   +A + F  M 
Sbjct: 94  NVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMR 153

Query: 79  RAG-FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC- 136
           R+G  L N +  G  +++C   G    +  +Q+  L+ K     D  V+  ++ M+  C 
Sbjct: 154 RSGDSLPNAFTFGCAMKSCGALG--WHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCG 211

Query: 137 -----------LE------------------STDCARRIFEEIETRDLISWNSIISVYSQ 167
                      +E                    D A  +FE +  RD++SWN ++S  SQ
Sbjct: 212 AVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQ 271

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
            G       +   M   G R  L    YT      A  SS+  G    +Q+ A V ++  
Sbjct: 272 SGRAREALSVAVDMHNRGVR--LDSTTYTSSLTACAKLSSLGWG----KQLHAQVIRSLP 325

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------- 274
             D YV SA+V  +A+ G F  AR++F  +  +N VS   L+ G  +             
Sbjct: 326 CIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQ 385

Query: 275 ----------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
                                        +++H   ++SG    V + N L++MYAKCG 
Sbjct: 386 MRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGN 445

Query: 307 IDDSRSVFRFMIGKDSVS-------------------------------WNTMISGLDQN 335
           + ++ S+F  M  +D VS                               WN M+    Q+
Sbjct: 446 LQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQH 505

Query: 336 GCYEEAIMNFCAMRRD-GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           G  E+ +  + AM  +  ++    + ++    CA +G   LG QI G  +K+GL  D SV
Sbjct: 506 GAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSV 565

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            NA++++Y+  G +S   K+F  +   D VSWN++I  ++    +  +A++ + DM + G
Sbjct: 566 MNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQ-HGMGKQAIEIFDDMLKKG 624

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTIENALLSCYGKCGEMDD 512
             P+ ++++ +L++ S   + + G + +  ++K  +NV+      + ++    + G + +
Sbjct: 625 AKPDYISYVAVLSSCSHSGLVQEG-KFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIE 683

Query: 513 CEKIFARMSERRDEVSWNSMISG---YIHNEL 541
            + +   M  +     W +++S    + +NEL
Sbjct: 684 AKNLIDEMPMKPTAEVWGALLSACKTHGNNEL 715



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 167/381 (43%), Gaps = 70/381 (18%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q+++     D ++ + ++ +Y + G    A ++F  + DRN+VSW  ++ G+   
Sbjct: 314 KQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQY 373

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G  +E+ ++F +M      ++++AL +++  C            Q+H L LKS  T   +
Sbjct: 374 GCFSESLELFNQMRAELMTVDQFALATIISGCSN--RMDMCLARQLHSLSLKSGHTRAVV 431

Query: 125 VSNVLIAMYGSC------------LESTDC------------------ARRIFEEIETRD 154
           +SN LI+MY  C            +E  D                   AR  F+ + TR+
Sbjct: 432 ISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRN 491

Query: 155 LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL 214
           +I+WN+++  Y Q G      K++S M  E     + P+  T+ +L        +  + L
Sbjct: 492 VITWNAMLGAYIQHGAEEDGLKMYSAMLTE---KDVIPDWVTYVTLFRGCAD--MGANKL 546

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK 274
             QI     K GL+ D  V +A+++ +++ G    ARKIF+ + +K++VS N ++ G   
Sbjct: 547 GDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITG--- 603

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK----DSVSWNTMIS 330
                                     Y++ G    +  +F  M+ K    D +S+  ++S
Sbjct: 604 --------------------------YSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLS 637

Query: 331 GLDQNGCYEEAIMNFCAMRRD 351
               +G  +E    F  ++RD
Sbjct: 638 SCSHSGLVQEGKFYFDMLKRD 658



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 157/359 (43%), Gaps = 54/359 (15%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H   LK G    V + N+LI++Y + G+L +A  +F  M +R+ VSW  +++ Y+ 
Sbjct: 414 ARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQ 473

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALG--------------------------------S 91
            G   +A + F  M     +     LG                                +
Sbjct: 474 VGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVT 533

Query: 92  VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE 151
           + R C + G +  K G Q+    +K     D  V N +I MY  C   ++ AR+IF+ + 
Sbjct: 534 LFRGCADMGAN--KLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISE-ARKIFDFLS 590

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
            +DL+SWN++I+ YSQ G      ++F  M ++G     KP+  ++ +++++      S 
Sbjct: 591 RKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKG----AKPDYISYVAVLSSC-----SH 641

Query: 212 SYLLQQ---ILAMVKKAGLLSD-LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
           S L+Q+      M+K+   +S  L   S +V   AR GN   A+ + ++M  K    + G
Sbjct: 642 SGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWG 701

Query: 268 --LMEGRRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFRFMIGK 320
             L   +  G      L    LFD+ +  +G    L  +YA  G   DS  V + M  K
Sbjct: 702 ALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDK 760


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/716 (35%), Positives = 411/716 (57%), Gaps = 26/716 (3%)

Query: 237 LVSGFARLGNF-----YYARKIFEQMIQKN---VVSMNGLMEGR--RKGKEVHGYLIRSG 286
           +V+ FAR G++     YY R + E +       VV++      +  ++G+ +H  ++ + 
Sbjct: 29  IVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETR 88

Query: 287 L--FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI-- 342
           L  FD++ +G  L+ MYA+C  ++ +R  F  M  K  V+WN +I+G  +NG +  A+  
Sbjct: 89  LLEFDII-LGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKI 147

Query: 343 -MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
             +  +   +G+     +  S L +C  +G I  G++I    +  G  SD  V NAL+++
Sbjct: 148 YQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINM 207

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y+  G L    KVF  +   D ++WN++I  +A   A  ++A++ +  M      PN VT
Sbjct: 208 YSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGA-ATQALELFQRMGPNDPKPNVVT 266

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE-MDDCEKIFARM 520
           FI +L A ++    + G  +H +V +    ++  I N LL+ Y KC   +++  ++F RM
Sbjct: 267 FIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERM 326

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
              RD ++WN +I  Y+       A+++   M       +  T + VLSACA +    +G
Sbjct: 327 -RTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQG 385

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
             VHA       + DVV+ ++L++MY++CG +D     F  +  +++ SW+++I+ YA+H
Sbjct: 386 KAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQH 445

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
           GH    L  F ++  +G   D VT V  LSACSH G++ EG + F SM   +GL P    
Sbjct: 446 GHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRH 505

Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
           F CMVDLL RAG L+  E  I+ MP  P+++ W ++L  C   N   T+   + A+ LFE
Sbjct: 506 FLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHN--DTKRAARVADKLFE 563

Query: 761 MEPQNAVNYV-LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           +E ++  + V LL+N+YA  G+W+DV   RK       +K  GCS++ + D VH FVAGD
Sbjct: 564 LESEDEHSTVTLLSNVYAEAGRWDDV---RKTRNRRAARKNPGCSYIEINDTVHEFVAGD 620

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLT 878
           +SHPE++LI  ++K L+++M+DAGYVP  +  L +++ E KE ++ YHSEK+A+A+ +++
Sbjct: 621 KSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLIS 680

Query: 879 RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
                P+ I+KNLR C DCH+A KFIS+IVGR+IV+RDS RFHHF +G CSC DYW
Sbjct: 681 TPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 207/387 (53%), Gaps = 7/387 (1%)

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
           MY KCG++ D+ +VF  +   +SVSW  +++   +NG Y EA+  +  M  +GL      
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLG-LDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
            +  +  C+S   +  GQ +H   L+   L+ D+ +  AL+++YA    L    K F  M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDM---RRAGWSPNGVTFINILAAASSFSMG 475
            +   V+WN++I  ++ +      A+K Y DM      G  P+ +TF + L A +     
Sbjct: 121 GKKTLVTWNALIAGYSRN-GDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDI 179

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             G ++ A+ +    A+++ ++NAL++ Y KCG ++   K+F R+ + RD ++WN+MISG
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRL-KNRDVIAWNTMISG 238

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
           Y       +A+ L   M     + +  TF  +L+AC ++  LE+G  +H        E D
Sbjct: 239 YAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESD 298

Query: 596 VVIGSALVDMYSKC-GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           +VIG+ L++MY+KC   ++ A + F+ M  R+V +WN +I  Y ++G    AL +F QM+
Sbjct: 299 LVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQ 358

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEG 681
           L+   P+ +T   VLSAC+  G   +G
Sbjct: 359 LENVAPNEITLSNVLSACAVLGAKRQG 385



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/557 (24%), Positives = 263/557 (47%), Gaps = 52/557 (9%)

Query: 29  VYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYA 88
           +Y + G +A A  +F  +   NSVSW  IV+ +   G   EA   ++ MV  G   +   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSN-QTFDGLVSNVLIAMYGSCLESTDCARRIF 147
               +  C        K G  +H ++L++    FD ++   LI MY  C    + AR+ F
Sbjct: 61  FVVAIGVCS--SSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARC-RDLELARKTF 117

Query: 148 EEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS 207
           +E+  + L++WN++I+ YS+ GD     K++  M  +     +KP+  TF S + A   +
Sbjct: 118 DEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPE-GMKPDAITFSSALYAC--T 174

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
           V+      ++I A    +G  SD  V +AL++ +++ G+   ARK+F+++  ++V++ N 
Sbjct: 175 VVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNT 234

Query: 268 LMEGRRK-----------------------------------------GKEVHGYLIRSG 286
           ++ G  K                                         G+ +H  +   G
Sbjct: 235 MISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDG 294

Query: 287 LFDMVAVGNGLVNMYAKC-GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
               + +GN L+NMY KC  +++++R VF  M  +D ++WN +I    Q G  ++A+  F
Sbjct: 295 YESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIF 354

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             M+ + +  +  +L + LS+CA LG    G+ +H         +DV + N+L+++Y   
Sbjct: 355 KQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRC 414

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
           G L   + VF  + +   VSW+++I A+A         ++++ ++ + G + + VT ++ 
Sbjct: 415 GSLDDTVGVFAAIRDKSLVSWSTLIAAYA-QHGHSRTGLEHFWELLQEGLAADDVTMVST 473

Query: 466 LAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           L+A S   M K G Q    ++  + +A +      ++    + G ++  E +   M    
Sbjct: 474 LSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLP 533

Query: 525 DEVSWNSMISG-YIHNE 540
           D V+W S++SG  +HN+
Sbjct: 534 DAVAWTSLLSGCKLHND 550



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 155/571 (27%), Positives = 260/571 (45%), Gaps = 91/571 (15%)

Query: 2   KDAKLFHLQILKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           K  +L H  IL+     +D+ L   LI +Y R  DL  A K FDEM  +  V+W  +++G
Sbjct: 75  KQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAG 134

Query: 61  YTHKGMSNEACKMFKEMVRA---GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
           Y+  G    A K++++MV     G   +     S L AC   G      G ++    + S
Sbjct: 135 YSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVG--DISQGREIEARTVAS 192

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
               D +V N LI MY  C  S + AR++F+ ++ RD+I+WN++IS Y+++G      +L
Sbjct: 193 GYASDSIVQNALINMYSKC-GSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALEL 251

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F RM         KPN  TF  L+TA  +  L      + I   V++ G  SDL +G+ L
Sbjct: 252 FQRMGPN----DPKPNVVTFIGLLTACTN--LEDLEQGRAIHRKVREDGYESDLVIGNVL 305

Query: 238 VSGFARL-GNFYYARKIFEQMIQKNVVSMN------------------------------ 266
           ++ + +   +   AR++FE+M  ++V++ N                              
Sbjct: 306 LNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPN 365

Query: 267 -----------GLMEGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVF 314
                       ++  +R+GK VH  LI SG     V + N L+NMY +CG++DD+  VF
Sbjct: 366 EITLSNVLSACAVLGAKRQGKAVHA-LIASGRCKADVVLENSLMNMYNRCGSLDDTVGVF 424

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             +  K  VSW+T+I+   Q+G     + +F  + ++GL + + +++STLS+C+      
Sbjct: 425 AAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACS------ 478

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
                HG  LK G+ +        LS+  D G L+   + F  M     V   S  G   
Sbjct: 479 -----HGGMLKEGVQT-------FLSMVGDHG-LAPDYRHFLCM-----VDLLSRAGRLE 520

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANET 494
            +E L+        DM    + P+ V + ++L+     +  K   +V  ++ +    +E 
Sbjct: 521 AAENLIH-------DM---PFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEH 570

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           +    L + Y + G  DD  K   R + R++
Sbjct: 571 STVTLLSNVYAEAGRWDDVRKTRNRRAARKN 601


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 267/706 (37%), Positives = 403/706 (57%), Gaps = 28/706 (3%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGLFDMV 291
           ++L++ ++RLG    AR +F++M  KN++S N ++ G    ++ +E      +    + +
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTI 161

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           +  NGLV+ Y   G I+++R VF  M  ++ VSW  M+ G  + G   EA   F  M   
Sbjct: 162 S-WNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEK 220

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
            ++S    L   L      G I    ++      +  + DV     ++  Y   G L   
Sbjct: 221 NVVSWTVMLGGLLQE----GRIDEACRL----FDMMPEKDVVTRTNMIGGYCQVGRLVEA 272

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
             +F  MP  + VSW ++I  +  ++  V  A K +  M       N V++  +L   ++
Sbjct: 273 RMLFDEMPRRNVVSWTTMITGYVQNQQ-VDIARKLFEVMP----EKNEVSWTAMLKGYTN 327

Query: 472 FS-MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
              + +     +A  IK  VA      NA++ C+G+ GE+    ++F +M E+ DE +W+
Sbjct: 328 CGRLDEASELFNAMPIKSVVAC-----NAMILCFGQNGEVPKARQVFDQMREK-DEGTWS 381

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           +MI  Y    L   A+ L   M + G R +  +  +VLS CA +A L+ G E+HA  VR+
Sbjct: 382 AMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRS 441

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
             + DV + S L+ MY KCG +  A + FD   V++V  WNS+I+GYA+HG G +AL +F
Sbjct: 442 QFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVF 501

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
             M   G +PD VTFVGVLSACS+ G V +G + F SM   Y +  ++E ++CMVDLLGR
Sbjct: 502 HDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGR 561

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
           AG+L++  + I KMP+  +++IW  +LGAC      K +L   AA  L  +EP+NA  ++
Sbjct: 562 AGKLNEAMDLIEKMPMEADAIIWGALLGAC--RTHMKLDLAEVAAKKLLVLEPKNAGPFI 619

Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDES-HPEKDLIY 829
           LL+N+YAS G+W+DVA+ R+ M++  V K  GCSW+ ++  VH F  GD S HPE   I 
Sbjct: 620 LLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEIN 679

Query: 830 EKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNS-KLPIRIM 888
             L+ L+  +R+AGY P   F L D++ E K   + YHSEK+AVA+ L +    +PIR+M
Sbjct: 680 RILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVM 739

Query: 889 KNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           KNLRVCGDCH+A K I+K+ GREI+LRD+NRFHHF DG CSC DYW
Sbjct: 740 KNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 136/553 (24%), Positives = 243/553 (43%), Gaps = 109/553 (19%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N+LI  Y R+G +  A  +FDEM D+N +SW  IV+GY       EA  MF +M      
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERN-- 159

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
                                          +  N    G ++N +I          + A
Sbjct: 160 ------------------------------TISWNGLVSGYINNGMI----------NEA 179

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           R +F+ +  R+++SW +++  Y + G       LF +M  +                   
Sbjct: 180 REVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKN----------------VV 223

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLL------SDLYVGSALVSGFARLGNFYYARKIFEQM 257
           +++ +L G  LLQ+    + +A  L       D+   + ++ G+ ++G    AR +F++M
Sbjct: 224 SWTVMLGG--LLQE--GRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEM 279

Query: 258 IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN-----GLVNMYAKCGTIDD--- 309
            ++NVVS   ++ G  + ++V    I   LF+++   N      ++  Y  CG +D+   
Sbjct: 280 PRRNVVSWTTMITGYVQNQQVD---IARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASE 336

Query: 310 ----------------------------SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
                                       +R VF  M  KD  +W+ MI   ++ G   +A
Sbjct: 337 LFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDA 396

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +  F  M+R+G+  +  SLIS LS CA L  +  G++IH + ++   D DV V++ LLS+
Sbjct: 397 LELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSM 456

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y   G L++  +VF      D V WNS+I  +A    L  EA++ + DM  +G  P+ VT
Sbjct: 457 YIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYA-QHGLGVEALRVFHDMHFSGIMPDDVT 515

Query: 462 FINILAAASSFSMGKLGHQV-HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           F+ +L+A S     K G ++ ++   KY V  +      ++   G+ G++++   +  +M
Sbjct: 516 FVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKM 575

Query: 521 SERRDEVSWNSMI 533
               D + W +++
Sbjct: 576 PMEADAIIWGALL 588



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 204/456 (44%), Gaps = 76/456 (16%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N L++ Y+  G +  A ++FD MP+RN VSW  +V GY  +GM +EA  +F +M     +
Sbjct: 164 NGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVV 223

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY---GSCLEST 140
                LG +L+  +          +   C +       D +    +I  Y   G  +E  
Sbjct: 224 SWTVMLGGLLQEGR----------IDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVE-- 271

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
             AR +F+E+  R+++SW ++I+ Y Q        KLF  M         + NE ++ ++
Sbjct: 272 --ARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP--------EKNEVSWTAM 321

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
           +   Y++        +   AM  K+     +   +A++  F + G    AR++F+QM +K
Sbjct: 322 LK-GYTNCGRLDEASELFNAMPIKS-----VVACNAMILCFGQNGEVPKARQVFDQMREK 375

Query: 261 N---------VVSMNGL------------MEGRRK--------------------GKEVH 279
           +         V    GL             EG R                     G+E+H
Sbjct: 376 DEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIH 435

Query: 280 GYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
             L+RS  FD+ V V + L++MY KCG +  ++ VF     KD V WN++I+G  Q+G  
Sbjct: 436 AQLVRSQ-FDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLG 494

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI-HGEGLKLGLDSDVSVSNA 397
            EA+  F  M   G+M  + + +  LS+C+  G +  G +I +    K  ++  +     
Sbjct: 495 VEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYAC 554

Query: 398 LLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           ++ L   AG L+  + +   MP E D + W +++GA
Sbjct: 555 MVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGA 590



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 2/104 (1%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H Q+++  F  DV++ + L+++Y++ G+LA A ++FD    ++ V W  I++GY   G+
Sbjct: 434 IHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGL 493

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQV 110
             EA ++F +M  +G + +      VL AC   G    K G+++
Sbjct: 494 GVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTG--NVKKGLEI 535



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 23/222 (10%)

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
           C  F ++  ++L+  YS+ G+I+ A   FD M  +N+ SWNS+++GY ++    +A  +F
Sbjct: 94  CSNF-IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMF 152

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
            +M       + +++ G++S   + G+++E  + F  M +       +  ++ MV    +
Sbjct: 153 DKMSER----NTISWNGLVSGYINNGMINEAREVFDRMPE-----RNVVSWTAMVRGYVK 203

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR-KAANMLFEMEPQNAVNY 769
            G + + E    +MP   N + W  +LG   +        GR   A  LF+M P+  V  
Sbjct: 204 EGMISEAETLFWQMP-EKNVVSWTVMLGGLLQE-------GRIDEACRLFDMMPEKDV-- 253

Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
           V   NM     +   + +AR  M   E+ +    SW TM  G
Sbjct: 254 VTRTNMIGGYCQVGRLVEAR--MLFDEMPRRNVVSWTTMITG 293


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 267/706 (37%), Positives = 403/706 (57%), Gaps = 28/706 (3%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGLFDMV 291
           ++L++ ++RLG    AR +F++M  KN++S N ++ G    ++ +E      +    + +
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTI 161

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           +  NGLV+ Y   G I+++R VF  M  ++ VSW  M+ G  + G   EA   F  M   
Sbjct: 162 S-WNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEK 220

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
            ++S    L   L      G I    ++      +  + DV     ++  Y   G L   
Sbjct: 221 NVVSWTVMLGGLLQE----GRIDEACRL----FDMMPEKDVVTRTNMIGGYCQVGRLVEA 272

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
             +F  MP  + VSW ++I  +  ++  V  A K +  M       N V++  +L   ++
Sbjct: 273 RMLFDEMPRRNVVSWTTMITGYVQNQQ-VDIARKLFEVMP----EKNEVSWTAMLKGYTN 327

Query: 472 FS-MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
              + +     +A  IK  VA      NA++ C+G+ GE+    ++F +M E+ DE +W+
Sbjct: 328 CGRLDEASELFNAMPIKSVVAC-----NAMILCFGQNGEVPKARQVFDQMREK-DEGTWS 381

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           +MI  Y    L   A+ L   M + G R +  +  +VLS CA +A L+ G E+HA  VR+
Sbjct: 382 AMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRS 441

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
             + DV + S L+ MY KCG +  A + FD   V++V  WNS+I+GYA+HG G +AL +F
Sbjct: 442 QFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVF 501

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
             M   G +PD VTFVGVLSACS+ G V +G + F SM   Y +  ++E ++CMVDLLGR
Sbjct: 502 HDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGR 561

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
           AG+L++  + I KMP+  +++IW  +LGAC      K +L   AA  L  +EP+NA  ++
Sbjct: 562 AGKLNEAMDLIEKMPMEADAIIWGALLGAC--RTHMKLDLAEVAAKKLLVLEPKNAGPFI 619

Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDES-HPEKDLIY 829
           LL+N+YAS G+W+DVA+ R+ M++  V K  GCSW+ ++  VH F  GD S HPE   I 
Sbjct: 620 LLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEIN 679

Query: 830 EKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNS-KLPIRIM 888
             L+ L+  +R+AGY P   F L D++ E K   + YHSEK+AVA+ L +    +PIR+M
Sbjct: 680 RILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVM 739

Query: 889 KNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           KNLRVCGDCH+A K I+K+ GREI+LRD+NRFHHF DG CSC DYW
Sbjct: 740 KNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 136/553 (24%), Positives = 243/553 (43%), Gaps = 109/553 (19%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N+LI  Y R+G +  A  +FDEM D+N +SW  IV+GY       EA  MF +M      
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERN-- 159

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
                                          +  N    G ++N +I          + A
Sbjct: 160 ------------------------------TISWNGLVSGYINNGMI----------NEA 179

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           R +F+ +  R+++SW +++  Y + G       LF +M  +                   
Sbjct: 180 REVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKN----------------VV 223

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLL------SDLYVGSALVSGFARLGNFYYARKIFEQM 257
           +++ +L G  LLQ+    + +A  L       D+   + ++ G+ ++G    AR +F++M
Sbjct: 224 SWTVMLGG--LLQE--GRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEM 279

Query: 258 IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN-----GLVNMYAKCGTIDD--- 309
            ++NVVS   ++ G  + ++V    I   LF+++   N      ++  Y  CG +D+   
Sbjct: 280 PRRNVVSWTTMITGYVQNQQVD---IARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASE 336

Query: 310 ----------------------------SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
                                       +R VF  M  KD  +W+ MI   ++ G   +A
Sbjct: 337 LFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDA 396

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +  F  M+R+G+  +  SLIS LS CA L  +  G++IH + ++   D DV V++ LLS+
Sbjct: 397 LELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSM 456

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y   G L++  +VF      D V WNS+I  +A    L  EA++ + DM  +G  P+ VT
Sbjct: 457 YIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYA-QHGLGVEALRVFHDMHFSGIMPDDVT 515

Query: 462 FINILAAASSFSMGKLGHQV-HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           F+ +L+A S     K G ++ ++   KY V  +      ++   G+ G++++   +  +M
Sbjct: 516 FVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKM 575

Query: 521 SERRDEVSWNSMI 533
               D + W +++
Sbjct: 576 PMEADAIIWGALL 588



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 204/456 (44%), Gaps = 76/456 (16%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N L++ Y+  G +  A ++FD MP+RN VSW  +V GY  +GM +EA  +F +M     +
Sbjct: 164 NGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVV 223

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY---GSCLEST 140
                LG +L+  +          +   C +       D +    +I  Y   G  +E  
Sbjct: 224 SWTVMLGGLLQEGR----------IDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVE-- 271

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
             AR +F+E+  R+++SW ++I+ Y Q        KLF  M         + NE ++ ++
Sbjct: 272 --ARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP--------EKNEVSWTAM 321

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
           +   Y++        +   AM  K+     +   +A++  F + G    AR++F+QM +K
Sbjct: 322 LK-GYTNCGRLDEASELFNAMPIKS-----VVACNAMILCFGQNGEVPKARQVFDQMREK 375

Query: 261 N---------VVSMNGL------------MEGRRK--------------------GKEVH 279
           +         V    GL             EG R                     G+E+H
Sbjct: 376 DEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIH 435

Query: 280 GYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
             L+RS  FD+ V V + L++MY KCG +  ++ VF     KD V WN++I+G  Q+G  
Sbjct: 436 AQLVRSQ-FDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLG 494

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI-HGEGLKLGLDSDVSVSNA 397
            EA+  F  M   G+M  + + +  LS+C+  G +  G +I +    K  ++  +     
Sbjct: 495 VEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYAC 554

Query: 398 LLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           ++ L   AG L+  + +   MP E D + W +++GA
Sbjct: 555 MVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGA 590



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 2/104 (1%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H Q+++  F  DV++ + L+++Y++ G+LA A ++FD    ++ V W  I++GY   G+
Sbjct: 434 IHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGL 493

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQV 110
             EA ++F +M  +G + +      VL AC   G    K G+++
Sbjct: 494 GVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTG--NVKKGLEI 535



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 23/222 (10%)

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
           C  F ++  ++L+  YS+ G+I+ A   FD M  +N+ SWNS+++GY ++    +A  +F
Sbjct: 94  CSNF-IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMF 152

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
            +M       + +++ G++S   + G+++E  + F  M +       +  ++ MV    +
Sbjct: 153 DKMSER----NTISWNGLVSGYINNGMINEAREVFDRMPE-----RNVVSWTAMVRGYVK 203

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR-KAANMLFEMEPQNAVNY 769
            G + + E    +MP   N + W  +LG   +        GR   A  LF+M P+  V  
Sbjct: 204 EGMISEAETLFWQMP-EKNVVSWTVMLGGLLQE-------GRIDEACRLFDMMPEKDV-- 253

Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
           V   NM     +   + +AR  M   E+ +    SW TM  G
Sbjct: 254 VTRTNMIGGYCQVGRLVEAR--MLFDEMPRRNVVSWTTMITG 293


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 281/793 (35%), Positives = 420/793 (52%), Gaps = 95/793 (11%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A R+F  +  R   ++N++++ Y+  G        F  + R        P+ +++ +L+ 
Sbjct: 126 AERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPR--------PDSFSYNTLLH 177

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
           A     L  S  L  + A+  +  +  D    + ++S  A  G    AR  F+   +K+ 
Sbjct: 178 A-----LGVSSSLADVRALFDEMPV-KDSVSYNVMISSHANHGLVSLARHYFDLAPEKDA 231

Query: 263 VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
           VS NG++                               Y + G I ++R +F      D+
Sbjct: 232 VSWNGMLAA-----------------------------YVRNGRIQEARELFDSRTEWDA 262

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           +SWN +++G  Q    EEA   F  M +  ++S N    + +S  A  G +   +++   
Sbjct: 263 ISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWN----TMVSGYARRGDMAEARRL--- 315

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
              +    DV    A++S YA  G L    +VF  MP+ + VSWN+++ A+     +  E
Sbjct: 316 -FDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMM--E 372

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
             K   D                                   +   NVA+     N +L+
Sbjct: 373 EAKELFD----------------------------------AMPCRNVASW----NTMLT 394

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            Y + G +D+   IF  M ++ D VSW +M++ Y       + + L   M + G+ ++  
Sbjct: 395 GYAQAGMLDEARAIFGMMPQK-DAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRS 453

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
            FA VLS CA +A LE GM++H+  ++A       +G+AL+ MY KCG ++ A   F+ M
Sbjct: 454 AFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEM 513

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
             R+V SWN+MI+GYARHG G +AL +F  M+     PD +T VGVL+ACSH+GLV++G 
Sbjct: 514 EERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGI 573

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
            +F SM + +G+  + E ++CM+DLLGRAG LD+    +  MP  P+S +W  +LGA  R
Sbjct: 574 SYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGA-SR 632

Query: 743 ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
            + R +ELGR AA  +FE+EP+NA  YVLL+N+YAS GKW DV K R  M E  VKK  G
Sbjct: 633 IH-RNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPG 691

Query: 803 CSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKED 862
            SW+ +++ VH F  GD  HPE++ IY  L++L+ +M+ AGYV  T   L D+E E KE 
Sbjct: 692 FSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEH 751

Query: 863 LVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFH 921
           ++ YHSEK+AVA+ +L      PIR++KNLRVC DCH+AFK IS I GR I+LRDSNRFH
Sbjct: 752 MLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNRFH 811

Query: 922 HFNDGKCSCGDYW 934
           HF DG CSCGDYW
Sbjct: 812 HFRDGSCSCGDYW 824



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 230/523 (43%), Gaps = 70/523 (13%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF---- 74
           D F  NTL++       LA    LFDEMP ++SVS+  ++S + + G+ + A   F    
Sbjct: 168 DSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAP 227

Query: 75  -KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY 133
            K+ V    +L  Y     ++  +E               +  S   +D +  N L+A Y
Sbjct: 228 EKDAVSWNGMLAAYVRNGRIQEARE---------------LFDSRTEWDAISWNALMAGY 272

Query: 134 GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPN 193
                  + A+++F ++  RD++SWN+++S Y++RGD     +LF               
Sbjct: 273 VQ-RSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFD-------------- 317

Query: 194 EYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKI 253
                                             + D++  +A+VSG+A+ G    A+++
Sbjct: 318 -------------------------------VAPIRDVFTWTAIVSGYAQNGMLEEAKRV 346

Query: 254 FEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
           F+ M  KN VS N +M    +R+  E    L  +     VA  N ++  YA+ G +D++R
Sbjct: 347 FDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEAR 406

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           ++F  M  KD+VSW  M++   Q G  EE +  F  M R G   +  +    LS+CA + 
Sbjct: 407 AIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIA 466

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
            +  G Q+H   +K G      V NALL++Y   G +      F  M E D VSWN++I 
Sbjct: 467 ALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIA 526

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNV 490
            +A       EA++ +  MR+    P+ +T + +LAA S   + + G    ++    + V
Sbjct: 527 GYA-RHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGV 585

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           A +      ++   G+ G +D+   +   M    D   W +++
Sbjct: 586 ATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALL 628



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 111/500 (22%), Positives = 205/500 (41%), Gaps = 102/500 (20%)

Query: 18  YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF--- 74
           +D    N L+  YV+   +  A K+F++MP R+ VSW  +VSGY  +G   EA ++F   
Sbjct: 260 WDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVA 319

Query: 75  --KEMVRAGFLLNRYALGSVLR-------ACQECGPSGFKFGMQVHC---LVLKSNQTFD 122
             +++     +++ YA   +L        A  +     +   M  +    ++ ++ + FD
Sbjct: 320 PIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFD 379

Query: 123 GLVS------NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
            +        N ++  Y       D AR IF  +  +D +SW ++++ YSQ G +    +
Sbjct: 380 AMPCRNVASWNTMLTGYAQA-GMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQ 438

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVG 234
           LF  M R G       N   F  +++  A  +++  G  L  +++    KAG     +VG
Sbjct: 439 LFKEMGRCGEWV----NRSAFACVLSTCADIAALECGMQLHSRLI----KAGYGVGCFVG 490

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVG 294
           +AL++ + + G+   A   FE+M +++VVS N ++ G                       
Sbjct: 491 NALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAG----------------------- 527

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
                 YA+ G             GK+                   A+  F  MR+    
Sbjct: 528 ------YARHG------------FGKE-------------------ALEVFDTMRKTSTK 550

Query: 355 SSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
             + +L+  L++C+  G +  G    +      G+ +       ++ L   AG L   + 
Sbjct: 551 PDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVN 610

Query: 414 VFFLMP-EHDQVSWNSVIGA---FADSEALVSEAVKYY-LDMRRAGWSPNGVTFINILAA 468
           +   MP E D   W +++GA     +SE   + A K + L+   AG     V   NI A+
Sbjct: 611 LMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMY---VLLSNIYAS 667

Query: 469 ASSF-SMGKLGHQVHAQVIK 487
           +  +  + K+ H +H + +K
Sbjct: 668 SGKWRDVDKMRHIMHERGVK 687



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 148/347 (42%), Gaps = 45/347 (12%)

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
           E    N  ++ + + G + D E++FA M  RR   ++N+M++GY  N  LP+A++     
Sbjct: 106 EVIRRNRAITAHMRAGRVPDAERLFAAMP-RRSTSTYNTMLAGYAANGRLPQALSF---- 160

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE----FDVVIGSALVDMYSK 608
            +   R D F++ T+L A    ++L          VRA  +     D V  + ++  ++ 
Sbjct: 161 FRSIPRPDSFSYNTLLHALGVSSSL--------ADVRALFDEMPVKDSVSYNVMISSHAN 212

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF-SQMKLDGPLPDHVTFVG 667
            G +  A  +FDL P ++  SWN M++ Y R+G   +A  LF S+ + D      +++  
Sbjct: 213 HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDA-----ISWNA 267

Query: 668 VLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPIT 727
           +++       ++E  K F  M Q       +  ++ MV    R G++ +     +  PI 
Sbjct: 268 LMAGYVQRSQIEEAQKMFNKMPQR-----DVVSWNTMVSGYARRGDMAEARRLFDVAPIR 322

Query: 728 PNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
            +   W  ++         +  +  +A  +   M  +NAV++  +   Y      E+  +
Sbjct: 323 -DVFTWTAIVSGYA-----QNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKE 376

Query: 788 ARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESH------PEKDLI 828
              AM    V      SW TM  G       DE+       P+KD +
Sbjct: 377 LFDAMPCRNV-----ASWNTMLTGYAQAGMLDEARAIFGMMPQKDAV 418



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 48/94 (51%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H +++K G+    F+ N L+ +Y + G +  A   F+EM +R+ VSW  +++GY   G 
Sbjct: 474 LHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGF 533

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
             EA ++F  M +     +   L  VL AC   G
Sbjct: 534 GKEALEVFDTMRKTSTKPDDITLVGVLAACSHSG 567



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 26/243 (10%)

Query: 574 VATLERGMEVHACGVRACL----EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
            A  +R          AC+    + +V+  +  +  + + GR+  A R F  MP R+  +
Sbjct: 81  AAARQRSHRRPPAPADACITGKPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTST 140

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           +N+M++GYA +G   +AL+ F  +    P PD  ++  +L A   +  + +    F  M 
Sbjct: 141 YNTMLAGYAANGRLPQALSFFRSI----PRPDSFSYNTLLHALGVSSSLADVRALFDEMP 196

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
                +     ++ M+      G +     + +  P   +++ W  +L A  R N R  E
Sbjct: 197 -----VKDSVSYNVMISSHANHGLVSLARHYFDLAP-EKDAVSWNGMLAAYVR-NGRIQE 249

Query: 750 LGRKAANMLFEMEPQ-NAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
                A  LF+   + +A+++  L   Y    + E+  K    M + +V      SW TM
Sbjct: 250 -----ARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDV-----VSWNTM 299

Query: 809 KDG 811
             G
Sbjct: 300 VSG 302


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 261/716 (36%), Positives = 401/716 (56%), Gaps = 21/716 (2%)

Query: 237 LVSGFARLGNFYYARKIF----------EQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSG 286
           L+SG+  +G ++ A  +F          ++     V+S  G ++    GK +HG  I  G
Sbjct: 81  LISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCG 140

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
           L   V + N L++MY KC  ID +R +F      D+VSWN++I+G  + G YEE +    
Sbjct: 141 LGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLV 200

Query: 347 AMRRDGLMSSNFSLISTLSSC-ASLG-WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
            M   GL  + F+L S L SC  +L   +  G+ +HG  +K GLD D+ V  ALL +YA 
Sbjct: 201 KMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAK 260

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL----VSEAVKYYLDMRRAGWSPNGV 460
            GYL   +++F   P  + V +N++I  F  +E +      EA+K +  M+R G  P+  
Sbjct: 261 TGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDF 320

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           TF +I+   +     + G Q+HA + K+N+ ++  I + L+  Y   G  +D  K F   
Sbjct: 321 TFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCF-NS 379

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
           + + D VSW +MI+GY  N     A+ L + ++  G++ D F   T+LSACA VA    G
Sbjct: 380 TPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSG 439

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
            +VH   V+  +    ++ ++ + MY+K G +D A   F+ +   +V SW+ MI   A+H
Sbjct: 440 EQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQH 499

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
           GH   A+ LF  MK  G  P+ +TF+GVL+ACSH GLV+EG ++++SM + Y +   ++ 
Sbjct: 500 GHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKH 559

Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
            +C+VDLL RAG L   + FI       + ++WRT+L  C     +    G+  A  L E
Sbjct: 560 CTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGC--RIYKDIVTGKHVAEKLIE 617

Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           ++PQ + +YVLL N+Y   G      K R+ MK+  ++KE G SW+ + + VH FV GD 
Sbjct: 618 LDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVGDI 677

Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDL-VSYHSEKIAVAF-VLT 878
           SHP   +IY+KL+ + +K R  GY+ Q    +     E K  L V++HSEK+AV+F +++
Sbjct: 678 SHPMSQIIYKKLEGMLEKKRKIGYIDQKIQNVTISTKEVKGTLGVNHHSEKLAVSFGIVS 737

Query: 879 RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
                P+++MKNLRVC DCH+  K IS +  REI+LRDS RFHHF +G CSC DYW
Sbjct: 738 LPPSAPVKVMKNLRVCHDCHATMKLISVVEKREIILRDSLRFHHFKEGSCSCNDYW 793



 Score =  199 bits (505), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 157/586 (26%), Positives = 269/586 (45%), Gaps = 63/586 (10%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S   KL H  ++K  F   +FL N  +N+Y + G++ +A KLFD M +R+ +S+  ++SG
Sbjct: 25  SIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISG 84

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y   G  ++A  +F E   A   L++++   VL AC +     F  G  +H L +     
Sbjct: 85  YGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQI--KDFALGKVIHGLAIVCGLG 142

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
               ++N+LI MY  C E  D AR +FE  +  D +SWNS+I+ Y++ G    + KL  +
Sbjct: 143 QQVFLTNLLIDMYCKC-ERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVK 201

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M   G R     N +T GS + + Y ++ +     + +     K GL  D+ VG+AL+  
Sbjct: 202 MHHTGLRL----NAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDM 257

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG----------------------RRK---- 274
           +A+ G    A ++F     +NVV  N ++ G                      +R+    
Sbjct: 258 YAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKP 317

Query: 275 --------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                               GK++H ++ +  +     +G+ L+ +Y+  G+ +D    F
Sbjct: 318 SDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCF 377

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
                 D VSW TMI+G  QNG +E A+  F  +   G     F + + LS+CA +    
Sbjct: 378 NSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAER 437

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
            G+Q+HG  +K G+ +   V N+ +S+YA +G L      F  +   D VSW+ +I + A
Sbjct: 438 SGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNA 497

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-----IKYN 489
                  +A+  +  M+  G  PN +TF+ +L A S   + + G + +  +     +K N
Sbjct: 498 Q-HGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKIN 556

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           V + T I + L     + G + D +            V W +++SG
Sbjct: 557 VKHCTCIVDLL----SRAGRLLDAKNFILNSGFGDHPVMWRTLLSG 598


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 246/662 (37%), Positives = 385/662 (58%), Gaps = 8/662 (1%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           +++H  +I SGL     + N L+N Y  CG + D++ +F     K+ VSW  +ISGL +N
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKN 100

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
            C+ EAI  F  M       +  ++ S L + A+LG I + + +H   ++ G + +V V 
Sbjct: 101 DCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
            AL+ +Y+  G +    ++F  M E + VSWN+++  ++D      EA+  +  MRR G 
Sbjct: 161 TALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSD-HGFSEEAIDLFNLMRRKGL 219

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
             +  T ++++ A+ S    ++G  +H  +I+    N+  I+ AL+  Y     +DD  +
Sbjct: 220 LVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHR 279

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ-RGQRLDHFTFATVLSACASV 574
           +F+ M  + D  +W  M++G+       +A+     M+  +  +LD      +LS+C+  
Sbjct: 280 VFSEMFVK-DVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHS 338

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
             L++G  VHA  ++ C   ++ +GSA++DMY+ CG ++ A RFF  M  ++V  WN+MI
Sbjct: 339 GALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMI 398

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
           +G   +G+G  A+ LF QMK  G  PD  TFV VL ACSHAG+V EG + F  M +    
Sbjct: 399 AGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHD 458

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRK 753
           IP L+ ++C++D+LGRAG+LD    FIN MP  P+  ++ T+LGAC    N +   LG +
Sbjct: 459 IPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIK---LGHE 515

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
            +  +FEMEP +A  YVLL+NMYA  G WE V   R +++   +KK+ G S + +   ++
Sbjct: 516 ISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIY 575

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
            F+AG++ HP+   I   LK L  K++ AGYVP T   L D+  + K+D++ +HSEK+A+
Sbjct: 576 TFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAI 635

Query: 874 AFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           AF L R      IRI KNLR C DCHSA KF+SK+ GR +V++D+NRFH F DG CSC D
Sbjct: 636 AFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRD 695

Query: 933 YW 934
           YW
Sbjct: 696 YW 697



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 215/479 (44%), Gaps = 61/479 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H QI+  G  ++ FL N+L+N YV  G LA A ++F   P +N VSW  ++SG 
Sbjct: 38  KPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGL 97

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                  EA  +F+EM    F  N   + SVL A    G    +    VHC  ++     
Sbjct: 98  AKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGL--IRIAKSVHCFWVRGGFEG 155

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V   L+ MY S       AR++FE +  R+++SWN+I+S YS  G +     LF+ M
Sbjct: 156 NVFVETALVDMY-SKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLM 214

Query: 182 QREGFRYSLKPNEYTFGSLITAAYS----SVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           +R+G    L  + YT  SLI A+ S     V +G      I   + + G  +D ++ +AL
Sbjct: 215 RRKG----LLVDFYTIMSLIPASLSVGCLQVGTG------IHGFIIRTGYENDKHIKTAL 264

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVS----MNGLMEGR--------------------- 272
           +  +        A ++F +M  K+V +    + G   GR                     
Sbjct: 265 MDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLD 324

Query: 273 -----------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                            ++G+ VH   I++   + + VG+ +++MYA CG ++D++  F 
Sbjct: 325 SIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFY 384

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M  KD V WN MI+G   NG   +AI  F  M+  GL     + +S L +C+  G +  
Sbjct: 385 GMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYE 444

Query: 376 GQQIHGEGLKLGLD-SDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           G QI    +K   D  ++     ++ +   AG L         MP + D   +++++GA
Sbjct: 445 GLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGA 503



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 218/472 (46%), Gaps = 46/472 (9%)

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK 274
           LQQI A +  +GL  + ++ ++L++ +   G    A++IF     KNVVS   L+ G  K
Sbjct: 40  LQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAK 99

Query: 275 -----------------------------------------GKEVHGYLIRSGLFDMVAV 293
                                                     K VH + +R G    V V
Sbjct: 100 NDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFV 159

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
              LV+MY+K G +  +R +F  M  ++ VSWN ++SG   +G  EEAI  F  MRR GL
Sbjct: 160 ETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGL 219

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
           +   ++++S + +  S+G + +G  IHG  ++ G ++D  +  AL+ +Y     +    +
Sbjct: 220 LVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHR 279

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR-AGWSPNGVTFINILAAASSF 472
           VF  M   D  +W  ++  F+        A+K++  M        + +  + IL++ S  
Sbjct: 280 VFSEMFVKDVAAWTLMLTGFSSGRHW-DRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHS 338

Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
              + G +VHA  IK   AN   + +A++  Y  CG ++D ++ F  M E +D V WN+M
Sbjct: 339 GALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGE-KDVVCWNAM 397

Query: 533 ISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL 592
           I+G   N     A++L   M   G   D  TF +VL AC+    +  G+++    V+   
Sbjct: 398 IAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSH 457

Query: 593 EFDVVIGSA-LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR-HGH 642
           +   +   A ++D+  + G++D A  F + MP +  +   S + G  R HG+
Sbjct: 458 DIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGN 509


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 276/793 (34%), Positives = 436/793 (54%), Gaps = 61/793 (7%)

Query: 143  ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
            AR +F+++  +++ S N I+S YS  GD  +   LF                      ++
Sbjct: 276  ARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF----------------------LS 313

Query: 203  AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
            + + +  + + +++   A    AG  SD     AL    A LG       I +++    V
Sbjct: 314  SPHRNATTWTIMMRAHAA----AGRTSD-----ALSLFRAMLGEGV----IPDRVTVTTV 360

Query: 263  VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
            +++ G          +H + I+ GL   V V N L++ Y K G +  +R VF  M  KD+
Sbjct: 361  LNLPGCTV-----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDA 415

Query: 323  VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
            V++N M+ G  + G + +A+  F AMRR G       L+    S +    ++        
Sbjct: 416  VTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSVL-------- 467

Query: 383  GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
                    +V V+N+LL  Y+    L    ++F  MPE D VS+N +I A+A ++   + 
Sbjct: 468  --------NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQC-AAT 518

Query: 443  AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
             ++ + +M++ G+    + +  +L+ A S     +G Q+HAQ++   +A+E  + NAL+ 
Sbjct: 519  VLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALID 578

Query: 503  CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
             Y KCG +D  +  F+  SE+   +SW ++I+GY+ N    +A+ L   M + G R D  
Sbjct: 579  MYSKCGMLDAAKSNFSNRSEK-SAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRA 637

Query: 563  TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
            TF++++ A +S+A +  G ++H+  +R+  +  V  GS LVDMY+KCG +D A R FD M
Sbjct: 638  TFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEM 697

Query: 623  PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
            P RN  SWN++IS YA +G    A+ +F  M   G  PD VTF+ VL+ACSH GL DE  
Sbjct: 698  PERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECM 757

Query: 683  KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
            K+F  M   Y + P  E ++C++D LGR G   ++++ + +MP   + +IW ++L + CR
Sbjct: 758  KYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHS-CR 816

Query: 743  ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
             +  + EL R AA+ LF MEP +A  YV+L+N+YA  G+WED A  +K M++  V+KE+G
Sbjct: 817  IHGNQ-ELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESG 875

Query: 803  CSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKED 862
             SWV +K  ++ F + D + P  D I ++L  L ++M   GY P    AL  ++ E K +
Sbjct: 876  YSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLE 935

Query: 863  LVSYHSEKIAVAFVLTRN-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFH 921
             + YHSE++A+AF L    +  PIRIMKNL  C DCH+  K ISKIV R+I++RDS RFH
Sbjct: 936  SLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFH 995

Query: 922  HFNDGKCSCGDYW 934
            HF DG CSCGDYW
Sbjct: 996  HFKDGVCSCGDYW 1008



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 143/544 (26%), Positives = 260/544 (47%), Gaps = 47/544 (8%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           ++F  N +++ Y   GDL +A  LF   P RN+ +W  ++  +   G +++A  +F+ M+
Sbjct: 287 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 346

Query: 79  RAGFLLNRYALGSVLR----ACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
             G + +R  + +VL           P   KFG+  H  V   N   D    + L+A   
Sbjct: 347 GEGVIPDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTHVFV--CNTLLDAYCKHGLLA--- 401

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF-RYSLKPN 193
                   ARR+F E+  +D +++N+++   S+ G      +LF+ M+R G+ R+ L   
Sbjct: 402 -------AARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLL 454

Query: 194 EYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDL------------YVGSALVSGF 241
           +Y+     + + S+ +   ++   +L    K   L D+               + +++ +
Sbjct: 455 QYSH----SRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAY 510

Query: 242 ARLGNFYYARKIFEQMIQ----------KNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMV 291
           A         ++F +M +            ++S+ G +     GK++H  L+  GL    
Sbjct: 511 AWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASED 570

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
            +GN L++MY+KCG +D ++S F     K ++SW  +I+G  QNG +EEA+  F  MRR 
Sbjct: 571 LLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRA 630

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           GL     +  S + + +SL  I LG+Q+H   ++ G  S V   + L+ +YA  G L   
Sbjct: 631 GLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEA 690

Query: 412 LKVFFLMPEHDQVSWNSVIGAFAD-SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
           L+ F  MPE + +SWN+VI A+A   EA    A+K +  M   G++P+ VTF+++LAA S
Sbjct: 691 LRTFDEMPERNSISWNAVISAYAHYGEA--KNAIKMFEGMLHCGFNPDSVTFLSVLAACS 748

Query: 471 SFSMG-KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
              +  +     H    +Y+++        ++   G+ G     +K+   M  + D + W
Sbjct: 749 HNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIW 808

Query: 530 NSMI 533
            S++
Sbjct: 809 TSIL 812



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 195/406 (48%), Gaps = 66/406 (16%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K G    VF+CNTL++ Y + G LA+A ++F EM D+++V++  ++ G + +G+
Sbjct: 371 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 430

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             +A ++F  M RAG+  +R+ L                  +Q      +S    +  V+
Sbjct: 431 HTQALQLFAAMRRAGY--SRHPL----------------HLLQYSHSRSRSTSVLNVFVN 472

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+  Y  C +  D  RR+F+E+  RD +S+N II+ Y+      +V +LF  MQ+ GF
Sbjct: 473 NSLLDFYSKC-DCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGF 531

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              + P    + ++++ A S  L   ++ +QI A +   GL S+  +G+AL+  +++ G 
Sbjct: 532 DRQVLP----YATMLSVAGS--LPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGM 585

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG-----------------RRK--------------- 274
              A+  F    +K+ +S   L+ G                 RR                
Sbjct: 586 LDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKA 645

Query: 275 ---------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    G+++H YLIRSG    V  G+ LV+MYAKCG +D++   F  M  ++S+SW
Sbjct: 646 SSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISW 705

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           N +IS     G  + AI  F  M   G    + + +S L++C+  G
Sbjct: 706 NAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNG 751



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 150/320 (46%), Gaps = 16/320 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q++  G A +  L N LI++Y + G L +A   F    +++++SW  +++GY   
Sbjct: 555 KQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQN 614

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   EA ++F +M RAG   +R    S+++A       G   G Q+H  +++S       
Sbjct: 615 GQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG--LGRQLHSYLIRSGYKSSVF 672

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
             +VL+ MY  C    D A R F+E+  R+ ISWN++IS Y+  G+  +  K+F  M   
Sbjct: 673 SGSVLVDMYAKC-GCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHC 731

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA-LVSGFAR 243
           GF     P+  TF S++ A   + L+   +  +   ++K    +S      A ++    R
Sbjct: 732 GF----NPDSVTFLSVLAACSHNGLADECM--KYFHLMKHQYSISPWKEHYACVIDTLGR 785

Query: 244 LGNFYYARKIFEQMIQK--NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG----L 297
           +G F   +K+  +M  K   ++  + L   R  G +    +    LF M          L
Sbjct: 786 VGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVIL 845

Query: 298 VNMYAKCGTIDDSRSVFRFM 317
            N+YA+ G  +D+  V + M
Sbjct: 846 SNIYARAGQWEDAACVKKIM 865



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 10/206 (4%)

Query: 456 SPNGVTFINILAAASSFSMGKL---GHQVHAQVIKYNVANETTIE-NALLSCYGKCGEMD 511
           +P GVT  ++L    +  +  L   GH   A+ +   + ++     N +LS Y   G++ 
Sbjct: 246 APAGVTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLP 305

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
             + +F   S  R+  +W  M+  +        A++L   M+  G   D  T  TVL+  
Sbjct: 306 AAQHLFLS-SPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLP 364

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
                      +H   ++  L+  V + + L+D Y K G +  A R F  M  ++  ++N
Sbjct: 365 GCTVP-----SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYN 419

Query: 632 SMISGYARHGHGDKALTLFSQMKLDG 657
           +M+ G ++ G   +AL LF+ M+  G
Sbjct: 420 AMMMGCSKEGLHTQALQLFAAMRRAG 445



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 12/160 (7%)

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
           G +  A   FD MP +N++S N ++S Y+  G    A  LF    L  P  +  T+  ++
Sbjct: 271 GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF----LSSPHRNATTWTIMM 326

Query: 670 SACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPN 729
            A + AG   +    F++M    G+IP     + +++L G    +  +  F  K  +  +
Sbjct: 327 RAHAAAGRTSDALSLFRAMLG-EGVIPDRVTVTTVLNLPG--CTVPSLHPFAIKFGLDTH 383

Query: 730 SLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
             +  T+L A C     K  L   A  +  EM  ++AV Y
Sbjct: 384 VFVCNTLLDAYC-----KHGLLAAARRVFLEMHDKDAVTY 418


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 252/650 (38%), Positives = 372/650 (57%), Gaps = 44/650 (6%)

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
           S  WN +I+   +      A+  +  +R+      NF   S L +C  + W  LG++IHG
Sbjct: 89  SAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHG 148

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             LK GLD DV V NAL+ +Y +   +     VF  M E D VSW+++I + + ++    
Sbjct: 149 FVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEF-D 207

Query: 442 EAVKYYLDMRRAGWSPNGV---TFINILAAASSFSMGKLGHQVHAQVIKYNVANE---TT 495
            A++   +M      P+ V   + +N+ A  ++  MGK    +HA VI+ N  NE     
Sbjct: 208 MALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGK---AMHAYVIR-NSNNEHMGVP 263

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSER------------------------------RD 525
              ALL  Y KCG +    ++F  ++++                              RD
Sbjct: 264 TTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRD 323

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
            + W +M+S Y     + +A NL   M   G R    T  ++LS CA    L+ G  VH+
Sbjct: 324 VMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHS 383

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
              +  +E D ++ +ALVDMY+KCG I+ A R F     R++  WN++I+G+A HG+G++
Sbjct: 384 YIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEE 443

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
           AL +F++M+  G  P+ +TF+G+L ACSHAGLV EG K F+ M   +GL+PQ+E + CMV
Sbjct: 444 ALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMV 503

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN 765
           DLLGRAG LD+  E I  MPI PN+++W  ++ A CR + +  +LG  AA  L E+EP+N
Sbjct: 504 DLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA-CRLH-KNPQLGELAATQLLEIEPEN 561

Query: 766 AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
               VL++N+YA+  +W D A  RK MK   +KKE G S + +   VH F+ GD+SHP+ 
Sbjct: 562 CGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQI 621

Query: 826 DLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLP 884
             I E L E+ +K+ +AGYVP T   L +++ E KE  ++YHSEK+A+AF +++     P
Sbjct: 622 RRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTP 681

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           IRI+KNLRVC DCH+A K +SKI GR I++RD NRFHHF +G CSCGDYW
Sbjct: 682 IRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/488 (23%), Positives = 227/488 (46%), Gaps = 42/488 (8%)

Query: 51  SVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQV 110
           S  W  +++ YT +     A  ++ ++ +  F ++ +   SVL+AC +   S  + G ++
Sbjct: 89  SAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQV--SWTQLGKEI 146

Query: 111 HCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD 170
           H  VLK     D  V N L+ MYG C    + AR +F+++  RD++SW+++I   S+  +
Sbjct: 147 HGFVLKKGLDRDVFVGNALMLMYGEC-ACVEYARLVFDKMMERDVVSWSTMIRSLSRNKE 205

Query: 171 TISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLL 228
               F +   + RE     ++P+E    S++   A  +++  G  +   ++       + 
Sbjct: 206 ----FDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHM- 260

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLF 288
             +   +AL+  +A+ G+   AR++F  + QK VVS   ++ G           IRS   
Sbjct: 261 -GVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAG----------CIRS--- 306

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
                             ++++R++F     +D + W  M+S   Q  C ++A   F  M
Sbjct: 307 ----------------NRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQM 350

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           R  G+  +  +++S LS CA  G + LG+ +H    K  ++ D  ++ AL+ +YA  G +
Sbjct: 351 RTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDI 410

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
           +   ++F      D   WN++I  FA       EA+  + +M R G  PN +TFI +L A
Sbjct: 411 NAAGRLFIEAISRDICMWNAIITGFA-MHGYGEEALDIFAEMERQGVKPNDITFIGLLHA 469

Query: 469 ASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
            S   +   G ++  +++  + +  +      ++   G+ G +D+  ++   M  + + +
Sbjct: 470 CSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTI 529

Query: 528 SWNSMISG 535
            W ++++ 
Sbjct: 530 VWGALVAA 537



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 106/517 (20%), Positives = 215/517 (41%), Gaps = 70/517 (13%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  +LK G   DVF+ N L+ +Y     +  A  +FD+M +R+ VSW+ ++   +  
Sbjct: 144 KEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRN 203

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN------ 118
              + A ++ +EM       +  A+ S++    +   +  + G  +H  V++++      
Sbjct: 204 KEFDMALELIREMNFMQVRPSEVAMVSMVNLFADT--ANMRMGKAMHAYVIRNSNNEHMG 261

Query: 119 ---------------------QTFDGLVSNVLI---AMYGSCLEST--DCARRIFEEIET 152
                                Q F+GL    ++   AM   C+ S   + AR +F+  + 
Sbjct: 262 VPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQN 321

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGS 212
           RD++ W +++S Y+Q       F LF +M+  G R    P + T  SL++    +V    
Sbjct: 322 RDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVR----PTKVTIVSLLS--LCAVAGAL 375

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR 272
            L + + + + K  +  D  + +ALV  +A+ G+   A ++F + I +++   N ++   
Sbjct: 376 DLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAII--- 432

Query: 273 RKGKEVHGY----------LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
             G  +HGY          + R G+        GL++  +  G + + + +F  M+    
Sbjct: 433 -TGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFG 491

Query: 323 V-----SWNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
           +      +  M+  L + G  +EA  ++    ++ + ++         L     LG +  
Sbjct: 492 LVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAA 551

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM--PEHDQVSWNSVIGAF 433
            Q +  E    G +  +S   A  + ++DA  + + +K   +   P H  +  N  +  F
Sbjct: 552 TQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEF 611

Query: 434 A---DSEALVSEAVKYYLDMRR----AGWSPNGVTFI 463
                S   +    +   +MRR    AG+ P+  T +
Sbjct: 612 LMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVL 648


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 291/887 (32%), Positives = 454/887 (51%), Gaps = 93/887 (10%)

Query: 88  ALGSVLRACQECGPSGFKFGMQ-VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRI 146
           AL   LR+C   G  G   G + +H  ++         + N L+  Y SC   +D  R +
Sbjct: 22  ALADALRSC---GSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLL 78

Query: 147 FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE---GFRYSLKPNEYTFGSLITA 203
             +I+  ++I+ N +++ Y+++G      +LF RM R     +   +       GS ++ 
Sbjct: 79  RADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSC 138

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
                L    L  Q+L +  K     D  V +ALV  F R G   +A ++F Q+ +  + 
Sbjct: 139 G---ALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIF 195

Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
             N ++ G                             YAK   ID +   F  M  +D V
Sbjct: 196 CRNSMLAG-----------------------------YAKLYGIDHAIEYFEDMAERDVV 226

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA---SLGWIMLGQQIH 380
           SWN MI+ L Q+G   EA+     M R G+   + +  S+L++CA   SLGW   G+Q+H
Sbjct: 227 SWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGW---GKQLH 283

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
            + ++     D  V++AL+ LYA  G      +VF  + + + VSW  +IG     E   
Sbjct: 284 AKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECF- 342

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
           S++V+ +  MR    + +      +++   +     LG Q+H+  +K        + N+L
Sbjct: 343 SKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSL 402

Query: 501 LSCYGKCGEMDDCEKIFARMSER------------------------------RDEVSWN 530
           +S Y KCG++ + E +F+ MSER                              R+ ++WN
Sbjct: 403 ISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWN 462

Query: 531 SMISGYIHNELLPKAMNLVWFMM-QRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
           +M+  YI +      + +   M+ Q+    D  T+ T+   CA +   + G ++    V+
Sbjct: 463 AMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVK 522

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
           A L  +V + +A + MYSKCGRI  A + FDL+  ++V SWN+MI+GY++HG G +A   
Sbjct: 523 AGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKT 582

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           F  M   G  PD++++V VLS CSH+GLV EG  +F  M++V+G+ P LE FSCMVDLLG
Sbjct: 583 FDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLG 642

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVN 768
           RAG L + ++ I+KMP+ P + +W  +L AC    N    EL   AA  +FE++  ++ +
Sbjct: 643 RAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGN---DELAELAAKHVFELDSPDSGS 699

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
           Y+LLA +Y+  GK +D A+ RK M++  +KK  G SW+ +++ VHVF A D SHP+   I
Sbjct: 700 YMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAI 759

Query: 829 YEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRI 887
             K+ EL +K+   GYV            ES    + +HSEK+AVAF +++  + +PI I
Sbjct: 760 RNKMDELMEKIAHLGYV----------RTESPRSEI-HHSEKLAVAFGIMSLPAWMPIHI 808

Query: 888 MKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           MKNLR+CGDCH+  K IS +  RE V+RD  RFHHF  G CSCGDYW
Sbjct: 809 MKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 855



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 150/643 (23%), Positives = 271/643 (42%), Gaps = 120/643 (18%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD-EMPDRNSVSWACIVSGYT 62
           A+  H +++  G A  VFL NTL++ Y+  G L+ A +L   ++ + N ++   +++GY 
Sbjct: 39  ARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYA 98

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRAC---QECGPSGFK-FGMQVHCLVLKSN 118
            +G  ++A ++F  M R         +    R       CG  G +    Q+  L  K +
Sbjct: 99  KQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKFD 158

Query: 119 QTFDGLVSNVLIAMYGSC------------------------------LESTDCARRIFE 148
              D  V   L+ M+  C                              L   D A   FE
Sbjct: 159 FWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFE 218

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
           ++  RD++SWN +I+  SQ G       L   M R+G R  L    YT      A   S+
Sbjct: 219 DMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVR--LDSTTYTSSLTACARLFSL 276

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
             G    +Q+ A V ++    D YV SAL+  +A+ G+F  A+++F  +  +N VS   L
Sbjct: 277 GWG----KQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVL 332

Query: 269 MEGRRK-----------------------------------------GKEVHGYLIRSGL 287
           + G  +                                         G+++H   ++SG 
Sbjct: 333 IGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGH 392

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD-------------- 333
              + V N L+++YAKCG + ++  VF  M  +D VSW +MI+                 
Sbjct: 393 NRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDG 452

Query: 334 -----------------QNGCYEEAIMNFCAMRRDGLMSSNF-SLISTLSSCASLGWIML 375
                            Q+G  E+ +  + AM     ++ ++ + ++    CA +G   L
Sbjct: 453 MATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKL 512

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G QI G  +K GL  +VSV+NA +++Y+  G +S   K+F L+   D VSWN++I  ++ 
Sbjct: 513 GDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYS- 571

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM---GKLGHQVHAQVIKYNVAN 492
              +  +A K + DM   G  P+ ++++ +L+  S   +   GKL   +  +V  + ++ 
Sbjct: 572 QHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRV--HGISP 629

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
                + ++   G+ G + + + +  +M  +     W +++S 
Sbjct: 630 GLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 672



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 140/339 (41%), Gaps = 63/339 (18%)

Query: 457 PNGVTFINILAAASSFSMGKLG--HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
           P+ VT     A  S  S G L     +H +++   +A+   ++N LL  Y  CG + D  
Sbjct: 16  PHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDAR 75

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           ++     +  + ++ N M++GY     L  A  L      R  R D  ++ T++S  +  
Sbjct: 76  RLLRADIKEPNVITHNIMMNGYAKQGSLSDAEEL----FDRMPRRDVASWNTLMSDTSRP 131

Query: 575 ATLERGMEVHACGVRACLEF---------------DVVIGSALVDMYSKCGRIDYASR-- 617
           A         +CG   C E                D  + +ALVDM+ +CG +D+ASR  
Sbjct: 132 AG-----SWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLF 186

Query: 618 -----------------------------FFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
                                        +F+ M  R+V SWN MI+  ++ G   +AL 
Sbjct: 187 SQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALG 246

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF--SCMVD 706
           L  +M   G   D  T+   L+AC  A L   G+   +  ++V   +PQ++ +  S +++
Sbjct: 247 LVVEMHRKGVRLDSTTYTSSLTAC--ARLFSLGWGK-QLHAKVIRSLPQIDPYVASALIE 303

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANC 745
           L  + G   + +   N +    NS+ W  ++G   +  C
Sbjct: 304 LYAKCGSFKEAKRVFNSLQ-DRNSVSWTVLIGGSLQYEC 341


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 254/666 (38%), Positives = 381/666 (57%), Gaps = 9/666 (1%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYA--KCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
           K K+ H  L+R+ L       + L++  A    G ++ +R +F  M   D    NTMI G
Sbjct: 26  KTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRG 85

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
             ++    EA+  +  M   G+   N++    L++CA LG + LG++ H E LK G  SD
Sbjct: 86  YARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSD 145

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           + V NAL+  Y + G       VF      D V+WN +I A  + + L  +A     +M 
Sbjct: 146 LFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLN-KGLSEKAFDLLDEMT 204

Query: 452 RA-GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
           +     P+ VT ++++ A +     + G  +H+   +  +     + NA+L  Y KC ++
Sbjct: 205 KLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDI 264

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
           +  +++F R+ E+ D +SW SM+SG   +    +A+ L   M      LD  T   VLSA
Sbjct: 265 ESAQEVFNRIREK-DVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSA 323

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
           CA    L++G  +H    +  +  D+V+ +ALVDMY+KCG ID A + F  M VRNV++W
Sbjct: 324 CAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTW 383

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           N++I G A HGHG+ A++LF QM+ D  +PD VTF+ +L ACSHAGLVDEG   F++M  
Sbjct: 384 NALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKN 443

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
            + + P++E + C+VDLL RA ++D    FI  MPI  NS++W T+LGAC        +L
Sbjct: 444 KFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGG--HFDL 501

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
             K    + E+EP +   YV+L+N+YA   +W+   K RK MK   ++K  GCSW+ +  
Sbjct: 502 AEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNG 561

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMR-DAGYVPQTKFALFDLEPESKEDLVSYHSE 869
            +H FVAGD SH + + IY  ++E+ +++  D G+VP T   LFD+E E KE  +  HSE
Sbjct: 562 MIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSE 621

Query: 870 KIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKC 928
           K+A+A  +++  S  PIRI+KNLRVC DCHS  K  SK+  REIV RD +RFHHF +G C
Sbjct: 622 KLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSC 681

Query: 929 SCGDYW 934
           SC D+W
Sbjct: 682 SCMDFW 687



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 209/476 (43%), Gaps = 57/476 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYV--RVGDLASASKLFDEMPDRNSVSWACIVSGY 61
            K  H  +L+    ++    + LI+       GDL  A KLF +M + +      ++ GY
Sbjct: 27  TKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGY 86

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                  EA  ++  MV  G  ++ Y    VL AC   G    K G + HC VLK+    
Sbjct: 87  ARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLG--AVKLGRRFHCEVLKNGFGS 144

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V N LI  Y +C  S  CA  +F+E   RD+++WN +I+ +  +G +   F L   M
Sbjct: 145 DLFVINALIQFYHNC-GSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEM 203

Query: 182 QREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            +     +L+P+E T  SL+ A     ++  G +L     +  K+ GL  +L V +A++ 
Sbjct: 204 TKLD---NLRPDEVTMVSLVPACAQLGNLERGKFL----HSYSKELGLDENLRVNNAILD 256

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------- 274
            + +  +   A+++F ++ +K+V+S   ++ G  K                         
Sbjct: 257 MYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEIT 316

Query: 275 ----------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                           GK +H  + +  +   + +   LV+MYAKCG+ID +  VFR M 
Sbjct: 317 LVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMR 376

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-Q 377
            ++  +WN +I GL  +G  E+AI  F  M  D LM  + + I+ L +C+  G +  G  
Sbjct: 377 VRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLA 436

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                  K  ++  +     ++ L   A  +   L     MP + + V W +++GA
Sbjct: 437 MFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGA 492



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 137/273 (50%), Gaps = 14/273 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  + FH ++LK+GF  D+F+ N LI  Y   G    A  +FDE   R+ V+W  +++ +
Sbjct: 128 KLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAH 187

Query: 62  THKGMSNEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
            +KG+S +A  +  EM +   L  +   + S++ AC + G    + G  +H    +    
Sbjct: 188 LNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLG--NLERGKFLHSYSKELGLD 245

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            +  V+N ++ MY  C +  + A+ +F  I  +D++SW S++S  ++ G       LF +
Sbjct: 246 ENLRVNNAILDMYCKC-DDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQK 304

Query: 181 MQREGFRYSLKPNEYTF-GSLITAAYSSVL-SGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           MQ       ++ +E T  G L   A +  L  G Y    I  ++ K  +  DL + +ALV
Sbjct: 305 MQLN----KIELDEITLVGVLSACAQTGALDQGKY----IHLLIDKFEINCDLVLETALV 356

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             +A+ G+   A ++F +M  +NV + N L+ G
Sbjct: 357 DMYAKCGSIDLALQVFRRMRVRNVFTWNALIGG 389


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 251/641 (39%), Positives = 377/641 (58%), Gaps = 7/641 (1%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           +++ Y++ G I   R  F  M   D VSWN +I+    N  ++   + F  M   G+   
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
              +   LS+C     I +G+ I    L  G++ +  V  AL+S+Y   G+ +    VF 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            M   D V+W++++ A+A +     EA+  +  M   G +PN VT ++ L A +S    +
Sbjct: 121 RMSHRDVVAWSAMVAAYARN-GHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLR 179

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY 536
            G  +H +V    + +   +  AL++ YGKCG ++   + F ++ E+ + V+W+++ + Y
Sbjct: 180 SGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEK-NVVAWSAISAAY 238

Query: 537 IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG--VRACLEF 594
             N+    A+ ++  M   G   +  TF +VL ACA++A L++G  +H     +   LE 
Sbjct: 239 ARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLES 298

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           DV + +ALV+MYSKCG +  A   FD +   ++  WNS+I+  A+HG  +KAL LF +M+
Sbjct: 299 DVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMR 358

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
           L+G  P  +TF  VL ACSHAG++D+G KHF S    +G+ P+ E F CMVDLLGRAG +
Sbjct: 359 LEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWI 418

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
              E+ +  MP  P+ + W   LGAC     R  +    AA  LF+++P+    YVLL+N
Sbjct: 419 VDSEDLLLHMPFEPHPVAWMAFLGAC--RTYRNMDRAIWAAENLFQLDPRKRAPYVLLSN 476

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           MYA  G+W DVA+ R+AM+     KEAG SW+ +KD VH F++GD  HP    I+ +L+ 
Sbjct: 477 MYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQR 536

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRV 893
           L + M++AGYVP T+  L D++ E KE +V YHSEK+A+AF +LT     PIR++KNLRV
Sbjct: 537 LTKLMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRV 596

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           C DCH+A KFISK+V REIV+RD NRFH F +G CSCGDYW
Sbjct: 597 CNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 185/387 (47%), Gaps = 45/387 (11%)

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME---GRRK------------------- 274
           ++S ++++GN    RK F++M   ++VS N L+    G R                    
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 275 -------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                              G+ +   ++ +G+ +   V   LV+MY K G   D+ SVF 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M  +D V+W+ M++   +NG   EA+  F  M  DG+  +  +L+S L +CASLG +  
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G  +H      G+ S V V  AL++LY   G +   ++ F  + E + V+W+++  A+A 
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYAR 240

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH--AQVIKYNVANE 493
           ++    +A++    M   G  PN  TF+++L A ++ +  K G ++H   QV+   + ++
Sbjct: 241 NDR-NRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESD 299

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM 553
             +  AL++ Y KCG +     +F +++   D V WNS+I+    +    KA+ L   M 
Sbjct: 300 VYVLTALVNMYSKCGNLALAGDMFDKIAH-LDLVLWNSLIATNAQHGQTEKALELFERMR 358

Query: 554 QRGQRLDHFTFATVLSACASVATLERG 580
             G +    TF +VL AC+    L++G
Sbjct: 359 LEGLQPTIITFTSVLFACSHAGMLDQG 385



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/478 (24%), Positives = 214/478 (44%), Gaps = 69/478 (14%)

Query: 26  LINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLN 85
           +++ Y ++G++ +  K FDEMP  + VSW  +++ Y      +     F+ M+  G    
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
              +   L AC +        G  +   +L +    + +V   L++MYG     TD A  
Sbjct: 61  EVGISIFLSACTDA--REITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAA-S 117

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           +F  +  RD+++W+++++ Y++ G       LF +M  +G    + PN+ T  S + A  
Sbjct: 118 VFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDG----VAPNKVTLVSGLDACA 173

Query: 206 S--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
           S   + SG+ + Q+    V+  G+ S + VG+ALV+ + + G    A + F Q+++KNVV
Sbjct: 174 SLGDLRSGALMHQR----VEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVV 229

Query: 264 SMNGL---------------------MEG--------------------RRKGKEVH--G 280
           + + +                     +EG                     ++G+ +H   
Sbjct: 230 AWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERT 289

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
            ++  GL   V V   LVNMY+KCG +  +  +F  +   D V WN++I+   Q+G  E+
Sbjct: 290 QVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEK 349

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL-KLGLDSDVSVSNALL 399
           A+  F  MR +GL  +  +  S L +C+  G +  G++     +   G+  +      ++
Sbjct: 350 ALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMV 409

Query: 400 SLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
            L   AG++     +   MP E   V+W + +G           A + Y +M RA W+
Sbjct: 410 DLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLG-----------ACRTYRNMDRAIWA 456



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 193/428 (45%), Gaps = 39/428 (9%)

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS-----------LKP 192
           R+ F+E+   D++SWN++I+ Y    D    +  F  M  +G                  
Sbjct: 15  RKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTDA 74

Query: 193 NEYTFGSLITAAY--SSVLSGSYLLQQILAMVKKAGLLSD------------LYVGSALV 238
            E T G  I  A   + +   S +   +++M  K G  +D            +   SA+V
Sbjct: 75  REITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMV 134

Query: 239 SGFARLGNFYYARKIFEQM----IQKNVVSM-NGL-----MEGRRKGKEVHGYLIRSGLF 288
           + +AR G+   A  +F QM    +  N V++ +GL     +   R G  +H  +   G+ 
Sbjct: 135 AAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQ 194

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
             V VG  LVN+Y KCG I+ +   F  ++ K+ V+W+ + +   +N    +AI     M
Sbjct: 195 SGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRM 254

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIH--GEGLKLGLDSDVSVSNALLSLYADAG 406
             +GL+ ++ + +S L +CA++  +  G++IH   + L  GL+SDV V  AL+++Y+  G
Sbjct: 255 DLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCG 314

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
            L+    +F  +   D V WNS+I   A       +A++ +  MR  G  P  +TF ++L
Sbjct: 315 NLALAGDMFDKIAHLDLVLWNSLIATNA-QHGQTEKALELFERMRLEGLQPTIITFTSVL 373

Query: 467 AAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
            A S   M   G +     I  + +  E      ++   G+ G + D E +   M     
Sbjct: 374 FACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPH 433

Query: 526 EVSWNSMI 533
            V+W + +
Sbjct: 434 PVAWMAFL 441



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 9/204 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +   L H ++   G    V +   L+N+Y + G + +A + F ++ ++N V+W+ I + Y
Sbjct: 179 RSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAY 238

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVH--CLVLKSNQ 119
                + +A ++   M   G + N     SVL AC     +  K G ++H    VL    
Sbjct: 239 ARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAI--AALKQGRRIHERTQVLGGGL 296

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D  V   L+ MY  C  +   A  +F++I   DL+ WNS+I+  +Q G T    +LF 
Sbjct: 297 ESDVYVLTALVNMYSKC-GNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFE 355

Query: 180 RMQREGFRYSLKPNEYTFGSLITA 203
           RM+ EG    L+P   TF S++ A
Sbjct: 356 RMRLEG----LQPTIITFTSVLFA 375



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 46/91 (50%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           Q+L  G   DV++   L+N+Y + G+LA A  +FD++   + V W  +++     G + +
Sbjct: 290 QVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEK 349

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           A ++F+ M   G         SVL AC   G
Sbjct: 350 ALELFERMRLEGLQPTIITFTSVLFACSHAG 380


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/662 (37%), Positives = 386/662 (58%), Gaps = 6/662 (0%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G E+H +    GL   V V   LV+ YAKCG + +++ +F  M  +D V+WN MI+G   
Sbjct: 128 GVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSL 187

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G  ++A+     M+ +G+  ++ +++  L +      +  G+ +HG  ++   D+ V V
Sbjct: 188 YGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVV 247

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM-RRA 453
              LL +YA    L    K+F +M   ++VSW+++IG +  S+ +  EA++ +  M  + 
Sbjct: 248 GTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCM-KEALELFDQMILKD 306

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
              P  VT  ++L A +  +    G ++H  +IK     +  + N LLS Y KCG +DD 
Sbjct: 307 AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDA 366

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            + F  M+ + D VS+++++SG + N     A+++   M   G   D  T   VL AC+ 
Sbjct: 367 IRFFDEMNPK-DSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSH 425

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           +A L+ G   H   +      D +I +AL+DMYSKCG+I +A   F+ M   ++ SWN+M
Sbjct: 426 LAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAM 485

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I GY  HG G +AL LF  +   G  PD +TF+ +LS+CSH+GLV EG   F +MS+ + 
Sbjct: 486 IIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFS 545

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           ++P++E   CMVD+LGRAG +D+   FI  MP  P+  IW  +L A CR + +  ELG +
Sbjct: 546 IVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA-CRIH-KNIELGEE 603

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
            +  +  + P++  N+VLL+N+Y++ G+W+D A  R   K+  +KK  GCSW+ +   VH
Sbjct: 604 VSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVH 663

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
            FV GD+SH +   I  KL+EL  +M+  GY  +  F   D+E E KE ++ YHSEK+A+
Sbjct: 664 AFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAI 723

Query: 874 AF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           AF +L   +  PI + KNLRVCGDCH+A KF++ I  REI +RD+NRFHHF +G C+CGD
Sbjct: 724 AFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGD 783

Query: 933 YW 934
           +W
Sbjct: 784 FW 785



 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 225/452 (49%), Gaps = 4/452 (0%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           + K++H + +++      +V + L  +Y  C  +  +R +F  +     + WN +I    
Sbjct: 26  EAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYA 85

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            NG ++ AI  + +M   G+  + ++    L +C+ L  I  G +IH      GL+SDV 
Sbjct: 86  WNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVF 145

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V  AL+  YA  G L    ++F  M   D V+WN++I A      L  +AV+  + M+  
Sbjct: 146 VCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMI-AGCSLYGLCDDAVQLIMQMQEE 204

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G  PN  T + +L           G  +H   ++ +  N   +   LL  Y KC  +   
Sbjct: 205 GICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYA 264

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV-WFMMQRGQRLDHFTFATVLSACA 572
            KIF  M   R+EVSW++MI GY+ ++ + +A+ L    +++        T  +VL ACA
Sbjct: 265 RKIFDVMGV-RNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACA 323

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
            +  L RG ++H   ++     D+++G+ L+ MY+KCG ID A RFFD M  ++  S+++
Sbjct: 324 KLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSA 383

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           ++SG  ++G+   AL++F  M+L G  PD  T +GVL ACSH   +  GF     +  V 
Sbjct: 384 IVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLI-VR 442

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           G        + ++D+  + G++    E  N+M
Sbjct: 443 GFATDTLICNALIDMYSKCGKISFAREVFNRM 474



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 152/579 (26%), Positives = 258/579 (44%), Gaps = 59/579 (10%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           +AK  H   LK+    D  + + L  +Y+    +  A +LFDE+P+ + + W  I+  Y 
Sbjct: 26  EAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYA 85

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G  + A  ++  M+  G   N+Y    VL+AC   G    + G+++H          D
Sbjct: 86  WNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS--GLLAIEDGVEIHSHAKMFGLESD 143

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V   L+  Y  C    + A+R+F  +  RD+++WN++I+  S  G      +L  +MQ
Sbjct: 144 VFVCTALVDFYAKCGILVE-AQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQ 202

Query: 183 REGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            EG    + PN  T  G L T   +  L     L        +    + + VG+ L+  +
Sbjct: 203 EEG----ICPNSSTIVGVLPTVGEAKALGHGKALH---GYCVRRSFDNGVVVGTGLLDMY 255

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------------------------- 272
           A+     YARKIF+ M  +N VS + ++ G                              
Sbjct: 256 AKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTL 315

Query: 273 -------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                         +G+++H Y+I+ G    + +GN L++MYAKCG IDD+   F  M  
Sbjct: 316 GSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNP 375

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           KDSVS++ ++SG  QNG    A+  F  M+  G+     +++  L +C+ L  +  G   
Sbjct: 376 KDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCS 435

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           HG  +  G  +D  + NAL+ +Y+  G +S   +VF  M  HD VSWN++I  +     L
Sbjct: 436 HGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYG-IHGL 494

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM---GKLGHQVHAQVIKYNVANETTI 496
             EA+  + D+   G  P+ +TFI +L++ S   +   G+L     ++        E  I
Sbjct: 495 GMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI 554

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
              ++   G+ G +D+       M    D   W++++S 
Sbjct: 555 --CMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 591



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 181/378 (47%), Gaps = 5/378 (1%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L +C     +   ++IH   LK   ++D SV + L  LY     +    ++F  +P    
Sbjct: 15  LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           + WN +I A+A +      A+  Y  M   G  PN  T+  +L A S     + G ++H+
Sbjct: 75  ILWNQIIRAYAWNGPF-DGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
               + + ++  +  AL+  Y KCG + + +++F+ MS  RD V+WN+MI+G     L  
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGCSLYGLCD 192

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
            A+ L+  M + G   +  T   VL        L  G  +H   VR   +  VV+G+ L+
Sbjct: 193 DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLL 252

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL-DGPLPDH 662
           DMY+KC  + YA + FD+M VRN  SW++MI GY       +AL LF QM L D   P  
Sbjct: 253 DMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTP 312

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFIN 722
           VT   VL AC+    +  G K    + ++ G +  +   + ++ +  + G +D    F +
Sbjct: 313 VTLGSVLRACAKLTDLSRGRKLHCYIIKL-GSVLDILLGNTLLSMYAKCGVIDDAIRFFD 371

Query: 723 KMPITPNSLIWRTVLGAC 740
           +M    +S+ +  ++  C
Sbjct: 372 EMN-PKDSVSFSAIVSGC 388



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 184/418 (44%), Gaps = 51/418 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +D    H      G   DVF+C  L++ Y + G L  A +LF  M  R+ V+W  +++G 
Sbjct: 126 EDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGC 185

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G+ ++A ++  +M   G   N   +  VL    E    G    +  +C+     ++F
Sbjct: 186 SLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCV----RRSF 241

Query: 122 DG--LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           D   +V   L+ MY  C +    AR+IF+ +  R+ +SW+++I  Y          +LF 
Sbjct: 242 DNGVVVGTGLLDMYAKC-QCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFD 300

Query: 180 RMQREGFRYSLKPNEYTFGSLITAA------------------YSSVLSGSYLLQQILAM 221
           +M     + ++ P   T GS++ A                     SVL    L   +L+M
Sbjct: 301 QMI---LKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLD-ILLGNTLLSM 356

Query: 222 VKKAGLLSDL------------YVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSM 265
             K G++ D                SA+VSG  + GN   A  IF  M    I  ++ +M
Sbjct: 357 YAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTM 416

Query: 266 NGLME------GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
            G++         + G   HGYLI  G      + N L++MY+KCG I  +R VF  M  
Sbjct: 417 LGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDR 476

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
            D VSWN MI G   +G   EA+  F  +   GL   + + I  LSSC+  G +M G+
Sbjct: 477 HDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGR 534



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 150/313 (47%), Gaps = 10/313 (3%)

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           ++H   +K     ++++ + L   Y  C ++    ++F  +      + WN +I  Y  N
Sbjct: 29  KIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNP-SVILWNQIIRAYAWN 87

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
                A++L   M+  G R + +T+  VL AC+ +  +E G+E+H+      LE DV + 
Sbjct: 88  GPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVC 147

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           +ALVD Y+KCG +  A R F  M  R+V +WN+MI+G + +G  D A+ L  QM+ +G  
Sbjct: 148 TALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGIC 207

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           P+  T VGVL     A  +  G K              +   + ++D+  +   L    +
Sbjct: 208 PNSSTIVGVLPTVGEAKALGHG-KALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARK 266

Query: 720 FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN--YVLLANMYA 777
             + M +  N + W  ++G    ++C K     +A  +  +M  ++A++   V L ++  
Sbjct: 267 IFDVMGVR-NEVSWSAMIGGYVASDCMK-----EALELFDQMILKDAMDPTPVTLGSVLR 320

Query: 778 SGGKWEDVAKARK 790
           +  K  D+++ RK
Sbjct: 321 ACAKLTDLSRGRK 333


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 263/739 (35%), Positives = 400/739 (54%), Gaps = 61/739 (8%)

Query: 255 EQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
           +     +V+   G +   R G   HG +  +G    V + N LV MY++CG+++++  +F
Sbjct: 154 DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 213

Query: 315 RFMIGK---DSVSWNTMISGLDQNGCYEEAIMNFCAM------RRDGLMSSNFSLISTLS 365
             +  +   D +SWN+++S   ++     A+  F  M      +     S   S+++ L 
Sbjct: 214 DEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILP 273

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           +C SL  +   +++HG  ++ G   DV V NAL+  YA  G +   +KVF +M   D VS
Sbjct: 274 ACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVS 333

Query: 426 WNSVIGAFADS-------------------------EALVS---------EAVKYYLDMR 451
           WN+++  ++ S                          A+++         EA+  +  M 
Sbjct: 334 WNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMI 393

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN----------ETTIENALL 501
            +G  PN VT I++L+A +S      G ++HA  +K  +            +  + NAL+
Sbjct: 394 FSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 453

Query: 502 SCYGKCGEMDDCEKIFARMS-ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR--GQR 558
             Y KC        IF  +  E R+ V+W  MI G+        A+ L   M+    G  
Sbjct: 454 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 513

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACL--EFDVVIGSALVDMYSKCGRIDYAS 616
            + +T + +L ACA +A +  G ++HA  +R          + + L+DMYSKCG +D A 
Sbjct: 514 PNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTAR 573

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
             FD M  ++  SW SM++GY  HG G +AL +F +M+  G +PD +TF+ VL ACSH G
Sbjct: 574 HVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCG 633

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
           +VD+G  +F SMS  YGL P+ E ++C +DLL R+G LDK    +  MP+ P +++W  +
Sbjct: 634 MVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVAL 693

Query: 737 LGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAE 796
           L A CR +    EL   A N L EM  +N  +Y L++N+YA+ G+W+DVA+ R  MK++ 
Sbjct: 694 LSA-CRVH-SNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSG 751

Query: 797 VKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLE 856
           +KK  GCSWV  + G   F  GD SHP    IY  L+ L  +++  GYVP+T FAL D++
Sbjct: 752 IKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVD 811

Query: 857 PESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLR 915
            E K +L+  HSEK+A+A+ +LT +   PIRI KNLRVCGDCHSAF +ISKIV  EIV+R
Sbjct: 812 EEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVR 871

Query: 916 DSNRFHHFNDGKCSCGDYW 934
           D +RFHHF +G CSCG YW
Sbjct: 872 DPSRFHHFKNGSCSCGGYW 890



 Score =  205 bits (522), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 170/649 (26%), Positives = 295/649 (45%), Gaps = 65/649 (10%)

Query: 26  LINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLN 85
           ++  Y+  G    A  + + +    +V W  ++  +  +G  + A  +   M+RAG   +
Sbjct: 95  VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 154

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
            + L  VL+AC E  PS ++ G   H L+  +    +  + N L+AMY  C  S + A  
Sbjct: 155 HFTLPHVLKACGEL-PS-YRCGSAFHGLICCNGFESNVFICNALVAMYSRC-GSLEEASM 211

Query: 146 IFEEIETR---DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           IF+EI  R   D+ISWNSI+S + +  +  +   LFS+M                  +  
Sbjct: 212 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 271

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
                 L      +++     + G   D++VG+AL+  +A+ G    A K+F  M  K+V
Sbjct: 272 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 331

Query: 263 VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM----I 318
           VS N ++ G                             Y++ G  + +  +F+ M    I
Sbjct: 332 VSWNAMVAG-----------------------------YSQSGNFEAAFELFKNMRKENI 362

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
             D V+W  +I+G  Q GC  EA+  F  M   G + +  ++IS LS+CASLG    G +
Sbjct: 363 PLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTE 422

Query: 379 IHGEGLKL----------GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP--EHDQVSW 426
           IH   LK           G D D+ V NAL+ +Y+          +F  +P  E + V+W
Sbjct: 423 IHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTW 482

Query: 427 NSVIGA---FADSEALVSEAVKYYLDM--RRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
             +IG    + DS    ++A+K +++M     G +PN  T   IL A +  +  ++G Q+
Sbjct: 483 TVMIGGHAQYGDS----NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 538

Query: 482 HAQVIKYNVANETT--IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           HA V++++    +   + N L+  Y KCG++D    +F  MS+ +  +SW SM++GY  +
Sbjct: 539 HAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQ-KSAISWTSMMTGYGMH 597

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-VHACGVRACLEFDVVI 598
               +A+++   M + G   D  TF  VL AC+    +++G+    +      L      
Sbjct: 598 GRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEH 657

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKA 646
            +  +D+ ++ GR+D A R    MP+      W +++S    H + + A
Sbjct: 658 YACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELA 706



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 225/498 (45%), Gaps = 73/498 (14%)

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           ++G G+V  Y  CG  D +  V   +    +V WN +I    + G  + AI   C M R 
Sbjct: 90  SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 149

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G    +F+L   L +C  L     G   HG     G +S+V + NAL+++Y+  G L   
Sbjct: 150 GTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 209

Query: 412 LKVFFLMPEH---DQVSWNSVIGAFADSEALVSEAVKYYLDM------RRAGWSPNGVTF 462
             +F  + +    D +SWNS++ A   S    + A+  +  M      +      + ++ 
Sbjct: 210 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWT-ALDLFSKMTLIVHEKPTNERSDIISI 268

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
           +NIL A  S        +VH   I+     +  + NAL+  Y KCG M++  K+F  M E
Sbjct: 269 VNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVF-NMME 327

Query: 523 RRDEVSWNSMISGY---------------IHNELLP--------------------KAMN 547
            +D VSWN+M++GY               +  E +P                    +A+N
Sbjct: 328 FKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALN 387

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL----------EFDVV 597
           L   M+  G   +  T  +VLSACAS+    +G E+HA  ++ CL          + D++
Sbjct: 388 LFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLM 447

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPV--RNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
           + +AL+DMYSKC     A   FD +P+  RNV +W  MI G+A++G  + AL LF +M  
Sbjct: 448 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS 507

Query: 656 D--GPLPDHVTFVGVLSACSHAGLVDEG-------FKHFKSMSQVYGLIPQLEQFSCMVD 706
           +  G  P+  T   +L AC+H   +  G        +H +  S  Y +       +C++D
Sbjct: 508 EPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVA------NCLID 561

Query: 707 LLGRAGELDKIEEFINKM 724
           +  + G++D      + M
Sbjct: 562 MYSKCGDVDTARHVFDSM 579



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 145/580 (25%), Positives = 254/580 (43%), Gaps = 84/580 (14%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR---NSVSWACIVSGYTH 63
           FH  I  +GF  +VF+CN L+ +Y R G L  AS +FDE+  R   + +SW  IVS +  
Sbjct: 177 FHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVK 236

Query: 64  KGMSNEACKMFKEM---VRAGFLLNRYALGSVLRACQECGP-SGFKFGMQVHCLVLKSNQ 119
              +  A  +F +M   V       R  + S++     CG         +VH   +++  
Sbjct: 237 SSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGT 296

Query: 120 TFDGLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
             D  V N LI  Y  C  +E+   A ++F  +E +D++SWN++++ YSQ G+  + F+L
Sbjct: 297 FPDVFVGNALIDAYAKCGLMEN---AVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFEL 353

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F  M++E                                             D+   +A+
Sbjct: 354 FKNMRKENIPL-----------------------------------------DVVTWTAV 372

Query: 238 VSGFARLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRRKGKEVHGYLIRSGL 287
           ++G+++ G  + A  +F QMI            +V+S    +    +G E+H Y +++ L
Sbjct: 373 IAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCL 432

Query: 288 FDM----------VAVGNGLVNMYAKCGTIDDSRSVFR--FMIGKDSVSWNTMISGLDQN 335
             +          + V N L++MY+KC +   +RS+F    +  ++ V+W  MI G  Q 
Sbjct: 433 LTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQY 492

Query: 336 GCYEEAIMNFCAMRRD--GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL--DSD 391
           G   +A+  F  M  +  G+  + +++   L +CA L  I +G+QIH   L+      S 
Sbjct: 493 GDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSA 552

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
             V+N L+ +Y+  G +     VF  M +   +SW S++  +       SEA+  +  MR
Sbjct: 553 YFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYG-MHGRGSEALDIFDKMR 611

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
           +AG+ P+ +TF+ +L A S   M   G     +    Y +          +    + G +
Sbjct: 612 KAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRL 671

Query: 511 DDCEKIFARMSERRDEVSWNSMISG-YIHN--ELLPKAMN 547
           D   +    M      V W +++S   +H+  EL   A+N
Sbjct: 672 DKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALN 711



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 130/552 (23%), Positives = 225/552 (40%), Gaps = 114/552 (20%)

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           S  S+   +++ Y   G     L V   +     V WN +I        L S A+     
Sbjct: 87  SPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDS-AINVSCR 145

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M RAG  P+  T  ++L A       + G   H  +      +   I NAL++ Y +CG 
Sbjct: 146 MLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 205

Query: 510 MDDCEKIFARMSER--RDEVSWNSMISGYIHN-------ELLPKAMNLVWFMMQRGQRLD 560
           +++   IF  +++R   D +SWNS++S ++ +       +L  K M L+       +R D
Sbjct: 206 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSK-MTLIVHEKPTNERSD 264

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
             +   +L AC S+  + +  EVH   +R     DV +G+AL+D Y+KCG ++ A + F+
Sbjct: 265 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 324

Query: 621 LMPVRNVYSWNSMISGYARHGH-----------------------------------GDK 645
           +M  ++V SWN+M++GY++ G+                                     +
Sbjct: 325 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 384

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF----------------------- 682
           AL LF QM   G LP+ VT + VLSAC+  G   +G                        
Sbjct: 385 ALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDE 444

Query: 683 ---------------KHFKSMSQVYGLIPQLEQ----FSCMVDLLGRAGEL-DKIEEFIN 722
                          + FK+   ++  IP  E+    ++ M+    + G+  D ++ F+ 
Sbjct: 445 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 504

Query: 723 KMP----ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVL---LANM 775
            +     + PN+     +L AC  A+     +G++    +       +  Y +   L +M
Sbjct: 505 MISEPYGVAPNAYTISCILMAC--AHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDM 562

Query: 776 YASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKEL 835
           Y+  G   DV  AR       + +++  SW +M  G  +   G E+            ++
Sbjct: 563 YSKCG---DVDTARHVFD--SMSQKSAISWTSMMTGYGMHGRGSEA-----------LDI 606

Query: 836 NQKMRDAGYVPQ 847
             KMR AG+VP 
Sbjct: 607 FDKMRKAGFVPD 618



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 172/371 (46%), Gaps = 68/371 (18%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIV------ 58
           K  H   +++G   DVF+ N LI+ Y + G + +A K+F+ M  ++ VSW  +V      
Sbjct: 285 KEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQS 344

Query: 59  -----------------------------SGYTHKGMSNEACKMFKEMVRAGFLLNRYAL 89
                                        +GY+ +G S+EA  +F++M+ +G L N   +
Sbjct: 345 GNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTI 404

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKS-----NQTFDG-----LVSNVLIAMYGSCLES 139
            SVL AC   G   F  G ++H   LK+     +  F G     +V N LI MY  C  S
Sbjct: 405 ISVLSACASLG--AFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKC-RS 461

Query: 140 TDCARRIFEEI--ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
              AR IF++I  E R++++W  +I  ++Q GD+    KLF  M  E   Y + PN YT 
Sbjct: 462 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE--PYGVAPNAYTI 519

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLL--SDLYVGSALVSGFARLGNFYYARKIFE 255
             ++ A   + L+   + +QI A V +      S  +V + L+  +++ G+   AR +F+
Sbjct: 520 SCILMAC--AHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFD 577

Query: 256 QMIQKNVVSMNGLMEG---RRKGKE---VHGYLIRSGLF-DMVAVGNGLVNMYA--KCGT 306
            M QK+ +S   +M G     +G E   +   + ++G   D +     LV +YA   CG 
Sbjct: 578 SMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITF---LVVLYACSHCGM 634

Query: 307 IDDSRSVFRFM 317
           +D   S F  M
Sbjct: 635 VDQGLSYFDSM 645


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/663 (36%), Positives = 382/663 (57%), Gaps = 7/663 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+EVHG+++++G    V V N L+ MY++ G++  +R +F  +  KD VSW+TMI   D+
Sbjct: 143 GQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDR 202

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL--DSDV 392
           +G  +EA+     M    +  S   +IS     A L  + LG+ +H   ++ G    S V
Sbjct: 203 SGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGV 262

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            +  AL+ +Y     L+   +VF  + +   +SW ++I A+     L +E V+ ++ M  
Sbjct: 263 PLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNL-NEGVRLFVKMLG 321

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G  PN +T ++++    +    +LG  +HA  ++        +  A +  YGKCG++  
Sbjct: 322 EGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRS 381

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
              +F    + +D + W++MIS Y  N  + +A ++   M   G R +  T  ++L  CA
Sbjct: 382 ARSVFDSF-KSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICA 440

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
              +LE G  +H+   +  ++ D+++ ++ VDMY+ CG ID A R F     R++  WN+
Sbjct: 441 KAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNA 500

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           MISG+A HGHG+ AL LF +M+  G  P+ +TF+G L ACSH+GL+ EG + F  M   +
Sbjct: 501 MISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEF 560

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
           G  P++E + CMVDLLGRAG LD+  E I  MP+ PN  ++ + L AC     +  +LG 
Sbjct: 561 GFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLH--KNIKLGE 618

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
            AA     +EP  +   VL++N+YAS  +W DVA  R+AMK+  + KE G S + +   +
Sbjct: 619 WAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLL 678

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
           H F+ GD  HP+   +YE + E+ +K+ DAGY P     L +++ E K   ++YHSEK+A
Sbjct: 679 HEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLA 738

Query: 873 VAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
           +A+ L   +  +PIRI+KNLRVC DCH+A K +SKI GREI++RD NRFHHF +G CSC 
Sbjct: 739 MAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCC 798

Query: 932 DYW 934
           DYW
Sbjct: 799 DYW 801



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 192/390 (49%), Gaps = 5/390 (1%)

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           +I+   +N C  +A   +  MR       NF + S L +C  +   +LGQ++HG  +K G
Sbjct: 95  LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
              DV V NAL+ +Y++ G L+    +F  +   D VSW+++I ++ D   L+ EA+   
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSY-DRSGLLDEALDLL 213

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE--NALLSCYG 505
            DM      P+ +  I+I    +  +  KLG  +HA V++     ++ +    AL+  Y 
Sbjct: 214 RDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYV 273

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           KC  +    ++F  +S +   +SW +MI+ YIH   L + + L   M+  G   +  T  
Sbjct: 274 KCENLAYARRVFDGLS-KASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITML 332

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           +++  C +   LE G  +HA  +R      +V+ +A +DMY KCG +  A   FD    +
Sbjct: 333 SLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSK 392

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
           ++  W++MIS YA++   D+A  +F  M   G  P+  T V +L  C+ AG ++ G K  
Sbjct: 393 DLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMG-KWI 451

Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGRAGELD 715
            S     G+   +   +  VD+    G++D
Sbjct: 452 HSYIDKQGIKGDMILKTSFVDMYANCGDID 481



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 131/530 (24%), Positives = 239/530 (45%), Gaps = 54/530 (10%)

Query: 50  NSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQ 109
           N+   + +++ Y       +A K++  M      ++ + + SVL+AC  C    F  G +
Sbjct: 88  NAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKAC--CLIPSFLLGQE 145

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
           VH  V+K+    D  V N LI MY S + S   AR +F++IE +D++SW+++I  Y + G
Sbjct: 146 VHGFVVKNGFHGDVFVCNALIMMY-SEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSG 204

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL- 228
                  L     R+     +KP+E   G +      + L+   L + + A V + G   
Sbjct: 205 LLDEALDLL----RDMHVMRVKPSE--IGMISITHVLAELADLKLGKAMHAYVMRNGKCG 258

Query: 229 -SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS----------MNGLMEGRR---- 273
            S + + +AL+  + +  N  YAR++F+ + + +++S           N L EG R    
Sbjct: 259 KSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVK 318

Query: 274 ---------------------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
                                       GK +H + +R+G    + +    ++MY KCG 
Sbjct: 319 MLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGD 378

Query: 307 IDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
           +  +RSVF     KD + W+ MIS   QN C +EA   F  M   G+  +  +++S L  
Sbjct: 379 VRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMI 438

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSW 426
           CA  G + +G+ IH    K G+  D+ +  + + +YA+ G +    ++F    + D   W
Sbjct: 439 CAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMW 498

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV-HAQV 485
           N++I  FA        A++ + +M   G +PN +TFI  L A S   + + G ++ H  V
Sbjct: 499 NAMISGFA-MHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMV 557

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
            ++    +      ++   G+ G +D+  ++   M  R +   + S ++ 
Sbjct: 558 HEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAA 607



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 212/468 (45%), Gaps = 52/468 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K+GF  DVF+CN LI +Y  VG LA A  LFD++ +++ VSW+ ++  Y   G+ 
Sbjct: 147 HGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLL 206

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS- 126
           +EA  + ++M       +   + S+     E   +  K G  +H  V+++ +     V  
Sbjct: 207 DEALDLLRDMHVMRVKPSEIGMISITHVLAEL--ADLKLGKAMHAYVMRNGKCGKSGVPL 264

Query: 127 -NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
              LI MY  C E+   ARR+F+ +    +ISW ++I+ Y    +     +LF +M  EG
Sbjct: 265 CTALIDMYVKC-ENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEG 323

Query: 186 FRYSLKPNEYTFGSLI----TAA--------YSSVLSGSYLLQQILA-----MVKKAGLL 228
               + PNE T  SL+    TA         ++  L   + L  +LA     M  K G +
Sbjct: 324 ----MFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDV 379

Query: 229 ------------SDLYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLMEGR 272
                        DL + SA++S +A+      A  IF  M    I+ N  +M  L+   
Sbjct: 380 RSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMIC 439

Query: 273 RK------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
            K      GK +H Y+ + G+   + +    V+MYA CG ID +  +F     +D   WN
Sbjct: 440 AKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWN 499

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI-HGEGLK 385
            MISG   +G  E A+  F  M   G+  ++ + I  L +C+  G +  G+++ H    +
Sbjct: 500 AMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHE 559

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
            G    V     ++ L   AG L    ++   MP    +   +V G+F
Sbjct: 560 FGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNI---AVFGSF 604



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 150/347 (43%), Gaps = 19/347 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           KL H   L++GF   + L    I++Y + GD+ SA  +FD    ++ + W+ ++S Y   
Sbjct: 348 KLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQN 407

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
              +EA  +F  M   G   N   + S+L  C + G    + G  +H  + K     D +
Sbjct: 408 NCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAG--SLEMGKWIHSYIDKQGIKGDMI 465

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           +    + MY +C +  D A R+F E   RD+  WN++IS ++  G   +  +LF  M+  
Sbjct: 466 LKTSFVDMYANCGD-IDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEAL 524

Query: 185 GFRYSLKPNEYTF-GSLITAAYSSVLS-GSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           G    + PN+ TF G+L   ++S +L  G  L  +   MV + G    +     +V    
Sbjct: 525 G----VTPNDITFIGALHACSHSGLLQEGKRLFHK---MVHEFGFTPKVEHYGCMVDLLG 577

Query: 243 RLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG---- 296
           R G    A ++ + M ++ N+      +   +  K +  G         +    +G    
Sbjct: 578 RAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVL 637

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
           + N+YA      D   + R M   + +     +S ++ NG   E IM
Sbjct: 638 MSNIYASANRWGDVAYIRRAM-KDEGIVKEPGVSSIEVNGLLHEFIM 683


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/662 (37%), Positives = 386/662 (58%), Gaps = 6/662 (0%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G E+H +    GL   V V   LV+ YAKCG + +++ +F  M  +D V+WN MI+G   
Sbjct: 128 GVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSL 187

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G  ++A+     M+ +G+  ++ +++  L +      +  G+ +HG  ++   D+ V V
Sbjct: 188 YGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVV 247

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM-RRA 453
              LL +YA    L    K+F +M   ++VSW+++IG +  S+ +  EA++ +  M  + 
Sbjct: 248 GTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCM-KEALELFDQMILKD 306

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
              P  VT  ++L A +  +    G ++H  +IK     +  + N LLS Y KCG +DD 
Sbjct: 307 AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDA 366

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            + F  M+ + D VS+++++SG + N     A+++   M   G   D  T   VL AC+ 
Sbjct: 367 IRFFDXMNPK-DSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSH 425

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           +A L+ G   H   +      D +I +AL+DMYSKCG+I +A   F+ M   ++ SWN+M
Sbjct: 426 LAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAM 485

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I GY  HG G +AL LF  +   G  PD +TF+ +LS+CSH+GLV EG   F +MS+ + 
Sbjct: 486 IIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFS 545

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           ++P++E   CMVD+LGRAG +D+   FI  MP  P+  IW  +L A CR + +  ELG +
Sbjct: 546 IVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA-CRIH-KNIELGEE 603

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
            +  +  + P++  N+VLL+N+Y++ G+W+D A  R   K+  +KK  GCSW+ +   VH
Sbjct: 604 VSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVH 663

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
            FV GD+SH +   I  KL+EL  +M+  GY  +  F   D+E E KE ++ YHSEK+A+
Sbjct: 664 AFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAI 723

Query: 874 AF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           AF +L   +  PI + KNLRVCGDCH+A KF++ I  REI +RD+NRFHHF +G C+CGD
Sbjct: 724 AFGILNLKAGRPILVTKNLRVCGDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCGD 783

Query: 933 YW 934
           +W
Sbjct: 784 FW 785



 Score =  211 bits (537), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 225/452 (49%), Gaps = 4/452 (0%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           + K++H + +++      +V + L  +Y  C  +  +R +F  +     + WN +I    
Sbjct: 26  EAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYA 85

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            NG ++ AI  + +M   G+  + ++    L +C+ L  I  G +IH      GL+SDV 
Sbjct: 86  WNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVF 145

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V  AL+  YA  G L    ++F  M   D V+WN++I A      L  +AV+  + M+  
Sbjct: 146 VCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMI-AGCSLYGLCDDAVQLIMQMQEE 204

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G  PN  T + +L           G  +H   ++ +  N   +   LL  Y KC  +   
Sbjct: 205 GICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYA 264

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV-WFMMQRGQRLDHFTFATVLSACA 572
            KIF  M   R+EVSW++MI GY+ ++ + +A+ L    +++        T  +VL ACA
Sbjct: 265 RKIFDVMGV-RNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACA 323

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
            +  L RG ++H   ++     D+++G+ L+ MY+KCG ID A RFFD M  ++  S+++
Sbjct: 324 KLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSA 383

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           ++SG  ++G+   AL++F  M+L G  PD  T +GVL ACSH   +  GF     +  V 
Sbjct: 384 IVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLI-VR 442

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           G        + ++D+  + G++    E  N+M
Sbjct: 443 GFATDTLICNALIDMYSKCGKISFAREVFNRM 474



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 152/579 (26%), Positives = 258/579 (44%), Gaps = 59/579 (10%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           +AK  H   LK+    D  + + L  +Y+    +  A +LFDE+P+ + + W  I+  Y 
Sbjct: 26  EAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYA 85

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G  + A  ++  M+  G   N+Y    VL+AC   G    + G+++H          D
Sbjct: 86  WNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS--GLLAIEDGVEIHSHAKMFGLESD 143

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V   L+  Y  C    + A+R+F  +  RD+++WN++I+  S  G      +L  +MQ
Sbjct: 144 VFVCTALVDFYAKCGILVE-AQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQ 202

Query: 183 REGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            EG    + PN  T  G L T   +  L     L        +    + + VG+ L+  +
Sbjct: 203 EEG----ICPNSSTIVGVLPTVGEAKALGHGKALH---GYCVRRSFDNGVVVGTGLLDMY 255

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------------------------- 272
           A+     YARKIF+ M  +N VS + ++ G                              
Sbjct: 256 AKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTL 315

Query: 273 -------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                         +G+++H Y+I+ G    + +GN L++MYAKCG IDD+   F  M  
Sbjct: 316 GSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNP 375

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           KDSVS++ ++SG  QNG    A+  F  M+  G+     +++  L +C+ L  +  G   
Sbjct: 376 KDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCS 435

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           HG  +  G  +D  + NAL+ +Y+  G +S   +VF  M  HD VSWN++I  +     L
Sbjct: 436 HGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYG-IHGL 494

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM---GKLGHQVHAQVIKYNVANETTI 496
             EA+  + D+   G  P+ +TFI +L++ S   +   G+L     ++        E  I
Sbjct: 495 GMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI 554

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
              ++   G+ G +D+       M    D   W++++S 
Sbjct: 555 --CMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 591



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 180/378 (47%), Gaps = 5/378 (1%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L +C     +   ++IH   LK   ++D SV + L  LY     +    ++F  +P    
Sbjct: 15  LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           + WN +I A+A +      A+  Y  M   G  PN  T+  +L A S     + G ++H+
Sbjct: 75  ILWNQIIRAYAWNGPF-DGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
               + + ++  +  AL+  Y KCG + + +++F+ MS  RD V+WN+MI+G     L  
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGCSLYGLCD 192

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
            A+ L+  M + G   +  T   VL        L  G  +H   VR   +  VV+G+ L+
Sbjct: 193 DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLL 252

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL-DGPLPDH 662
           DMY+KC  + YA + FD+M VRN  SW++MI GY       +AL LF QM L D   P  
Sbjct: 253 DMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTP 312

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFIN 722
           VT   VL AC+    +  G K    + ++ G +  +   + ++ +  + G +D    F +
Sbjct: 313 VTLGSVLRACAKLTDLSRGRKLHCYIIKL-GXVLDILLGNTLLSMYAKCGVIDDAIRFFD 371

Query: 723 KMPITPNSLIWRTVLGAC 740
            M    +S+ +  ++  C
Sbjct: 372 XMN-PKDSVSFSAIVSGC 388



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 188/417 (45%), Gaps = 49/417 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +D    H      G   DVF+C  L++ Y + G L  A +LF  M  R+ V+W  +++G 
Sbjct: 126 EDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGC 185

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G+ ++A ++  +M   G   N   +  VL    E    G    +  +C+     ++F
Sbjct: 186 SLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCV----RRSF 241

Query: 122 DG--LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           D   +V   L+ MY  C +    AR+IF+ +  R+ +SW+++I  Y          +LF 
Sbjct: 242 DNGVVVGTGLLDMYAKC-QCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFD 300

Query: 180 RMQREGFRYSLKPNEYTFGSLITA-AYSSVLS-----GSYLLQ-----------QILAMV 222
           +M     + ++ P   T GS++ A A  + LS       Y+++            +L+M 
Sbjct: 301 QMI---LKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMY 357

Query: 223 KKAGLLSDL------------YVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMN 266
            K G++ D                SA+VSG  + GN   A  IF  M    I  ++ +M 
Sbjct: 358 AKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTML 417

Query: 267 GLME------GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
           G++         + G   HGYLI  G      + N L++MY+KCG I  +R VF  M   
Sbjct: 418 GVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRH 477

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
           D VSWN MI G   +G   EA+  F  +   GL   + + I  LSSC+  G +M G+
Sbjct: 478 DIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGR 534



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 150/313 (47%), Gaps = 10/313 (3%)

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           ++H   +K     ++++ + L   Y  C ++    ++F  +      + WN +I  Y  N
Sbjct: 29  KIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNP-SVILWNQIIRAYAWN 87

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
                A++L   M+  G R + +T+  VL AC+ +  +E G+E+H+      LE DV + 
Sbjct: 88  GPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVC 147

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           +ALVD Y+KCG +  A R F  M  R+V +WN+MI+G + +G  D A+ L  QM+ +G  
Sbjct: 148 TALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGIC 207

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           P+  T VGVL     A  +  G K              +   + ++D+  +   L    +
Sbjct: 208 PNSSTIVGVLPTVGEAKALGHG-KALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARK 266

Query: 720 FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN--YVLLANMYA 777
             + M +  N + W  ++G    ++C K     +A  +  +M  ++A++   V L ++  
Sbjct: 267 IFDVMGVR-NEVSWSAMIGGYVXSDCMK-----EALELFDQMILKDAMDPTPVTLGSVLR 320

Query: 778 SGGKWEDVAKARK 790
           +  K  D+++ RK
Sbjct: 321 ACAKLTDLSRGRK 333


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/642 (38%), Positives = 382/642 (59%), Gaps = 7/642 (1%)

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR-RDGL 353
           N L+N+Y KC  +  +R +F  M  ++ VSW+ +++G  QNG   E    F  M  +D +
Sbjct: 61  NSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNI 120

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
             + + + + +SSC S  ++  G+Q HG  LK GL+    V NAL+ LY+    +   ++
Sbjct: 121 FPNEYVIATAISSCDSQMYVE-GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQ 179

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           + + +P +D   +N V+        + +EAV     +   G   N  T++ I    +S  
Sbjct: 180 ILYTVPGNDIFCYNLVVNGLLQHTHM-AEAVDVLKLIISEGIEWNNATYVTIFRLCASLK 238

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
              LG QVHAQ++K ++  +  I ++++  YGKCG +      F R+ + R+ VSW S+I
Sbjct: 239 DITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRL-QSRNVVSWTSII 297

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
           + Y  NE   +A+NL   M       + +T A + ++ A ++ L  G ++HA   ++ L+
Sbjct: 298 AAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLK 357

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
            +V++G+AL+ MY K G I  A   F  M   N+ +WN++I+G++ HG G +AL++F  M
Sbjct: 358 GNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDM 417

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGE 713
              G  P++VTF+GV+ AC+H  LVDEGF +F  + + + ++P LE ++C+V LL R+G 
Sbjct: 418 MATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGR 477

Query: 714 LDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLA 773
           LD+ E F+    I  + + WRT+L AC     +  + GRK A  L ++EP++   Y+LL+
Sbjct: 478 LDEAENFMRSHQINWDVVSWRTLLNACYVH--KHYDKGRKIAEYLLQLEPRDVGTYILLS 535

Query: 774 NMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLK 833
           NM+A   +W+ V + RK M+E  VKKE G SW+ +++  HVF + D  HPE +LIYE +K
Sbjct: 536 NMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVK 595

Query: 834 ELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRN-SKLPIRIMKNLR 892
           +L  K+R  GYVP     L D+E E K D +SYHSEK+AVA+ L +  S  PI ++KNLR
Sbjct: 596 DLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLR 655

Query: 893 VCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +C DCH+A K ISK+  R IV+RD+NRFHHF +G CSCGDYW
Sbjct: 656 MCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 218/426 (51%), Gaps = 20/426 (4%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM----------EGRRKGKEVHGYLIR 284
           SAL++G+ + GN     ++F++M+ K+ +  N  +          +   +GK+ HGY ++
Sbjct: 92  SALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVEGKQCHGYALK 151

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
           SGL     V N L+ +Y+KC  +  +  +   + G D   +N +++GL Q+    EA+  
Sbjct: 152 SGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDV 211

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
              +  +G+  +N + ++    CASL  I LG+Q+H + LK  +D DV + ++++ +Y  
Sbjct: 212 LKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGK 271

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
            G +      F  +   + VSW S+I A+  +E    EA+  +  M      PN  T   
Sbjct: 272 CGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNE-FFEEALNLFSKMEIDCIPPNEYTMAV 330

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           +  +A+  S   LG Q+HA+  K  +     + NAL+  Y K G++   + +F+ M+   
Sbjct: 331 LFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMT-CC 389

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
           + ++WN++I+G+ H+ L  +A+++   MM  G+R ++ TF  V+ ACA +  ++ G    
Sbjct: 390 NIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYF 449

Query: 585 ACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYAR 639
              ++   +F +V G    + +V + S+ GR+D A  F     +  +V SW ++++    
Sbjct: 450 NHLMK---QFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYV 506

Query: 640 HGHGDK 645
           H H DK
Sbjct: 507 HKHYDK 512



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/503 (24%), Positives = 232/503 (46%), Gaps = 57/503 (11%)

Query: 103 GFKFGMQVHCLVLKSNQTF-DGLVS--NVLIAMYGSCLESTDCARRIFEEIETRDLISWN 159
             KFG  +H  +  +N  + D  V+  N LI +Y  C +    AR++F+ +  R+++SW+
Sbjct: 34  NLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKC-DEVSIARKLFDSMPRRNVVSWS 92

Query: 160 SIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL-QQI 218
           ++++ Y Q G+ + VF+LF +M     + ++ PNEY    +I  A SS  S  Y+  +Q 
Sbjct: 93  ALMAGYMQNGNPLEVFELFKKMV---VKDNIFPNEY----VIATAISSCDSQMYVEGKQC 145

Query: 219 LAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV----VSMNGLMEGRRK 274
                K+GL    YV +AL+  +++  +   A +I   +   ++    + +NGL++    
Sbjct: 146 HGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHM 205

Query: 275 -------------------------------------GKEVHGYLIRSGLFDMVAVGNGL 297
                                                GK+VH  +++S +   V +G+ +
Sbjct: 206 AEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSI 265

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           ++MY KCG +   R+ F  +  ++ VSW ++I+   QN  +EEA+  F  M  D +  + 
Sbjct: 266 IDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNE 325

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
           +++    +S A L  + LG Q+H    K GL  +V V NAL+ +Y  +G +     VF  
Sbjct: 326 YTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSN 385

Query: 418 MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
           M   + ++WN++I   +    L  EA+  + DM   G  PN VTFI ++ A +   +   
Sbjct: 386 MTCCNIITWNAIITGHS-HHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDE 444

Query: 478 GHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG- 535
           G      ++K + +         ++    + G +D+ E          D VSW ++++  
Sbjct: 445 GFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNAC 504

Query: 536 YIHNELLPKAMNLVWFMMQRGQR 558
           Y+H     K   +  +++Q   R
Sbjct: 505 YVHKH-YDKGRKIAEYLLQLEPR 526



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 179/409 (43%), Gaps = 53/409 (12%)

Query: 8   HLQILKHGFA-YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           HL I  H +    V   N+LIN+YV+  +++ A KLFD MP RN VSW+ +++GY   G 
Sbjct: 44  HLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGN 103

Query: 67  SNEACKMFKEM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
             E  ++FK+M V+     N Y + + + +C       +  G Q H   LKS   F   V
Sbjct: 104 PLEVFELFKKMVVKDNIFPNEYVIATAISSCDS---QMYVEGKQCHGYALKSGLEFHQYV 160

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
            N LI +Y  C      A +I   +   D+  +N +++   Q         +   +  EG
Sbjct: 161 KNALIQLYSKC-SDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEG 219

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
             +    N  T+ ++     S  L    L +Q+ A + K+ +  D+Y+GS+++  + + G
Sbjct: 220 IEW----NNATYVTIFRLCAS--LKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCG 273

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------- 274
           N    R  F+++  +NVVS   ++    +                               
Sbjct: 274 NVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFN 333

Query: 275 ----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                     G ++H    +SGL   V VGN L+ MY K G I  ++SVF  M   + ++
Sbjct: 334 SAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIIT 393

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           WN +I+G   +G  +EA+  F  M   G   +  + I  + +CA L  +
Sbjct: 394 WNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLV 442



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 164/332 (49%), Gaps = 7/332 (2%)

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG---LDSDVSVSNALLSLYADA 405
           R + L S +   I  L   A    +  G+ IH           DS V+  N+L++LY   
Sbjct: 11  RSNFLASPHQDPIKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKC 70

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
             +S   K+F  MP  + VSW++++  +  +   +     +   + +    PN       
Sbjct: 71  DEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATA 130

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           +++  S  M   G Q H   +K  +     ++NAL+  Y KC ++    +I   +    D
Sbjct: 131 ISSCDS-QMYVEGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPG-ND 188

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
              +N +++G + +  + +A++++  ++  G   ++ T+ T+   CAS+  +  G +VHA
Sbjct: 189 IFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHA 248

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
             +++ ++ DV IGS+++DMY KCG +     FFD +  RNV SW S+I+ Y ++   ++
Sbjct: 249 QMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEE 308

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGL 677
           AL LFS+M++D   P+  T   + +  S AGL
Sbjct: 309 ALNLFSKMEIDCIPPNEYTMAVLFN--SAAGL 338



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 140/295 (47%), Gaps = 17/295 (5%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H   LK G  +  ++ N LI +Y +  D+ +A ++   +P  +   +  +V+G  
Sbjct: 141 EGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLL 200

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                 EA  + K ++  G   N     ++ R C          G QVH  +LKS+   D
Sbjct: 201 QHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASL--KDITLGKQVHAQMLKSDIDCD 258

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             + + +I MYG C  +    R  F+ +++R+++SW SII+ Y Q         LFS+M+
Sbjct: 259 VYIGSSIIDMYGKC-GNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKME 317

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            +     + PNEYT   L  +A  + LS   L  Q+ A  +K+GL  ++ VG+AL+  + 
Sbjct: 318 ID----CIPPNEYTMAVLFNSA--AGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYF 371

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---GKEVHGYLIRSGLFDMVAVG 294
           + G+   A+ +F  M   N+++ N ++ G      GKE       S   DM+A G
Sbjct: 372 KSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEA-----LSMFQDMMATG 421



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 147/337 (43%), Gaps = 29/337 (8%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q+LK     DV++ +++I++Y + G++ S    FD +  RN VSW  I++ Y   
Sbjct: 244 KQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQN 303

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
               EA  +F +M       N Y +  +  +    G S    G Q+H    KS    + +
Sbjct: 304 EFFEEALNLFSKMEIDCIPPNEYTMAVLFNSA--AGLSALCLGDQLHARAEKSGLKGNVM 361

Query: 125 VSNVLIAMYGSCLESTD--CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
           V N LI MY    +S D   A+ +F  +   ++I+WN+II+ +S  G       +F  M 
Sbjct: 362 VGNALIIMY---FKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMM 418

Query: 183 REGFRYSLKPNEYTF-GSLITAAYSSVL-SGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
             G R    PN  TF G ++  A+  ++  G Y    ++   K+  ++  L   + +V  
Sbjct: 419 ATGER----PNYVTFIGVILACAHLKLVDEGFYYFNHLM---KQFRIVPGLEHYTCIVGL 471

Query: 241 FARLGNFYYARKIFE-QMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAV 293
            +R G    A        I  +VVS   L+          KG+++  YL++    D V  
Sbjct: 472 LSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRD-VGT 530

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFMIGKD-----SVSW 325
              L NM+A+    D    + + M  ++      VSW
Sbjct: 531 YILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSW 567


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 296/929 (31%), Positives = 491/929 (52%), Gaps = 74/929 (7%)

Query: 58   VSGYTHKGMSNEACKMFKEMV------RAGFLLNRYALGSVLRACQECGPSGFKFGMQVH 111
            +S +   G  +++ +  +E V         FLL R ALG +L+A  +      + G ++H
Sbjct: 405  ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGK--RKDIEMGRKIH 462

Query: 112  CLVLKSNQTF-DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD 170
             LV  S +   D ++   +I MY  C  S D +R +F+ + +++L  WN++IS YS+   
Sbjct: 463  QLVSGSTRLRNDDVLCTRIITMYAMC-GSPDDSRFVFDALRSKNLFQWNAVISSYSRNEL 521

Query: 171  TISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD 230
               V + F  M        L P+ +T+  +I A     +S   +   +  +V K GL+ D
Sbjct: 522  YDEVLETFIEMIST---TDLLPDHFTYPCVIKACAG--MSDVGIGLAVHGLVVKTGLVED 576

Query: 231  LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME-------------------- 270
            ++VG+ALVS +   G    A ++F+ M ++N+VS N ++                     
Sbjct: 577  VFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMME 636

Query: 271  ---------------------GRRK----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
                                  R +    GK VHG+ ++  L   + + N L++MY+KCG
Sbjct: 637  ENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCG 696

Query: 306  TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR-----DGLMSSNFSL 360
             I +++ +F+    K+ VSWNTM+ G    G   +    F  +R+     + + +   ++
Sbjct: 697  CITNAQMIFKMNNNKNVVSWNTMVGGFSAEG---DTHGTFDVLRQMLAGGEDVKADEVTI 753

Query: 361  ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
            ++ +  C    ++   +++H   LK     +  V+NA ++ YA  G LS   +VF  +  
Sbjct: 754  LNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRS 813

Query: 421  HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
                SWN++IG  A S      ++  +L M+ +G  P+  T  ++L+A S     +LG +
Sbjct: 814  KTVNSWNALIGGHAQSND-PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 872

Query: 481  VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
            VH  +I+  +  +  +  ++LS Y  CGE+   + +F  M E +  VSWN++I+GY+ N 
Sbjct: 873  VHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM-EDKSLVSWNTVITGYLQNG 931

Query: 541  LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
               +A+ +   M+  G +L   +   V  AC+ + +L  G E HA  ++  LE D  I  
Sbjct: 932  FPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIAC 991

Query: 601  ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
            +L+DMY+K G I  +S+ F+ +  ++  SWN+MI GY  HG   +A+ LF +M+  G  P
Sbjct: 992  SLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNP 1051

Query: 661  DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
            D +TF+GVL+AC+H+GL+ EG ++   M   +GL P L+ ++C++D+LGRAG+LDK    
Sbjct: 1052 DDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRV 1111

Query: 721  I-NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASG 779
            +  +M    +  IW+++L + CR + +  E+G K A  LFE+EP+   NYVLL+N+YA  
Sbjct: 1112 VAEEMSEEADVGIWKSLLSS-CRIH-QNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGL 1169

Query: 780  GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
            GKWEDV K R+ M E  ++K+AGCSW+ +   V  FV G+      + I      L  K+
Sbjct: 1170 GKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKI 1229

Query: 840  RDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCH 898
               GY P T     DL  E K + +  HSEK+A+ + L + S+   IR+ KNLR+C DCH
Sbjct: 1230 SKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCH 1289

Query: 899  SAFKFISKIVGREIVLRDSNRFHHFNDGK 927
            +A K ISK++ REIV+RD+ RFHHF +G+
Sbjct: 1290 NAAKLISKVMEREIVVRDNKRFHHFKNGE 1318



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 181/694 (26%), Positives = 312/694 (44%), Gaps = 65/694 (9%)

Query: 19   DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
            D  LC  +I +Y   G    +  +FD +  +N   W  ++S Y+   + +E  + F EM+
Sbjct: 474  DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 533

Query: 79   RAGFLL-NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
                LL + +    V++AC   G S    G+ VH LV+K+    D  V N L++ YG+  
Sbjct: 534  STTDLLPDHFTYPCVIKAC--AGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG 591

Query: 138  ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
              TD A ++F+ +  R+L+SWNS+I V+S  G +   F L   M  E    +  P+  T 
Sbjct: 592  FVTD-ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATL 650

Query: 198  GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
             +++         G  L + +     K  L  +L + +AL+  +++ G    A+ IF+  
Sbjct: 651  VTVLPVCAREREIG--LGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 708

Query: 258  IQKNVVSMNGLM-----EGRRKG------------------------------------- 275
              KNVVS N ++     EG   G                                     
Sbjct: 709  NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 768

Query: 276  -KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
             KE+H Y ++        V N  V  YAKCG++  ++ VF  +  K   SWN +I G  Q
Sbjct: 769  LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 828

Query: 335  NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            +     ++     M+  GL+  +F++ S LS+C+ L  + LG+++HG  ++  L+ D+ V
Sbjct: 829  SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 888

Query: 395  SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
              ++LSLY   G L     +F  M +   VSWN+VI  +  +      A+  +  M   G
Sbjct: 889  YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQN-GFPDRALGVFRQMVLYG 947

Query: 455  WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
                G++ + +  A S     +LG + HA  +K+ + ++  I  +L+  Y K G +    
Sbjct: 948  IQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSS 1007

Query: 515  KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
            K+F  + E +   SWN+MI GY  + L  +A+ L   M + G   D  TF  VL+AC   
Sbjct: 1008 KVFNGLKE-KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHS 1066

Query: 575  ATLERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF--DLMPVRNV 627
              +  G+        + G++  L+    +    +DM  + G++D A R    ++    +V
Sbjct: 1067 GLIHEGLRYLDQMKSSFGLKPNLKHYACV----IDMLGRAGQLDKALRVVAEEMSEEADV 1122

Query: 628  YSWNSMISGYARHGH---GDKALTLFSQMKLDGP 658
              W S++S    H +   G+K      +++ + P
Sbjct: 1123 GIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKP 1156



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 159/586 (27%), Positives = 278/586 (47%), Gaps = 64/586 (10%)

Query: 8    HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
            H  ++K G   DVF+ N L++ Y   G +  A +LFD MP+RN VSW  ++  ++  G S
Sbjct: 565  HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624

Query: 68   NEACKMFKEMVR----AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
             E+  +  EM+       F+ +   L +VL  C      G   G  VH   +K     + 
Sbjct: 625  EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL--GKGVHGWAVKLRLDKEL 682

Query: 124  LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            +++N L+ MY  C   T+ A+ IF+    ++++SWN+++  +S  GDT   F +  +M  
Sbjct: 683  VLNNALMDMYSKCGCITN-AQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 741

Query: 184  EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
             G    +K +E T  + +   +      S  L+++     K   + +  V +A V+ +A+
Sbjct: 742  GG--EDVKADEVTILNAVPVCFHESFLPS--LKELHCYSLKQEFVYNELVANAFVASYAK 797

Query: 244  LGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------------- 272
             G+  YA+++F  +  K V S N L+ G                                
Sbjct: 798  CGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSL 857

Query: 273  ----------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                      R GKEVHG++IR+ L   + V   ++++Y  CG +   +++F  M  K  
Sbjct: 858  LSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSL 917

Query: 323  VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
            VSWNT+I+G  QNG  + A+  F  M   G+     S++    +C+ L  + LG++ H  
Sbjct: 918  VSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAY 977

Query: 383  GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
             LK  L+ D  ++ +L+ +YA  G +++  KVF  + E    SWN++I  +     L  E
Sbjct: 978  ALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG-IHGLAKE 1036

Query: 443  AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-----IKYNVANETTIE 497
            A+K + +M+R G +P+ +TF+ +L A +   +   G +   Q+     +K N+ +   + 
Sbjct: 1037 AIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVI 1096

Query: 498  NALLSCYGKCGEMDDCEKIFA-RMSERRDEVSWNSMISG-YIHNEL 541
            + L    G+ G++D   ++ A  MSE  D   W S++S   IH  L
Sbjct: 1097 DML----GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNL 1138



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 25/326 (7%)

Query: 4    AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
             K  H  I+++    D+F+  +++++Y+  G+L +   LFD M D++ VSW  +++GY  
Sbjct: 870  GKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQ 929

Query: 64   KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
             G  + A  +F++MV  G  L   ++  V  AC    PS  + G + H   LK     D 
Sbjct: 930  NGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLL-PS-LRLGREAHAYALKHLLEDDA 987

Query: 124  LVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
             ++  LI MY   GS  +S+    ++F  ++ +   SWN++I  Y   G      KLF  
Sbjct: 988  FIACSLIDMYAKNGSITQSS----KVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEE 1043

Query: 181  MQREGFRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALV 238
            MQR G      P++ TF  ++TA   S L   G   L Q   M    GL  +L   + ++
Sbjct: 1044 MQRTGH----NPDDLTFLGVLTACNHSGLIHEGLRYLDQ---MKSSFGLKPNLKHYACVI 1096

Query: 239  SGFARLGNFYYA-RKIFEQMIQKNVVSM-NGLMEGRRKGKEVH-GYLIRSGLFDMVAVGN 295
                R G    A R + E+M ++  V +   L+   R  + +  G  + + LF++     
Sbjct: 1097 DMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKP 1156

Query: 296  G----LVNMYAKCGTIDDSRSVFRFM 317
                 L N+YA  G  +D R V + M
Sbjct: 1157 ENYVLLSNLYAGLGKWEDVRKVRQRM 1182



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 15/270 (5%)

Query: 5    KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
            K  H   LK  F Y+  + N  +  Y + G L+ A ++F  +  +   SW  ++ G+   
Sbjct: 770  KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 829

Query: 65   GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
                 +     +M  +G L + + + S+L AC +      + G +VH  ++++    D  
Sbjct: 830  NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL--KSLRLGKEVHGFIIRNWLERDLF 887

Query: 125  VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
            V   ++++Y  C E     + +F+ +E + L+SWN++I+ Y Q G       +F +M   
Sbjct: 888  VYLSVLSLYIHCGELC-TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLY 946

Query: 185  GFRY---SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            G +    S+ P    FG+       S+L    L ++  A   K  L  D ++  +L+  +
Sbjct: 947  GIQLCGISMMP---VFGA------CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 997

Query: 242  ARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
            A+ G+   + K+F  + +K+  S N ++ G
Sbjct: 998  AKNGSITQSSKVFNGLKEKSTASWNAMIMG 1027


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 271/767 (35%), Positives = 423/767 (55%), Gaps = 56/767 (7%)

Query: 218 ILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME------- 270
           + A + +A     L++ + L++ + RLG   +AR++ ++M + N VS N L++       
Sbjct: 36  VHAHIVRAHPSPSLFLRNTLLAAYCRLGG--HARRLLDEMPRTNAVSFNLLIDAYSRAGQ 93

Query: 271 ----------------------------------GR-RKGKEVHGYLIRSGLFDMVAVGN 295
                                             GR R+GK VH   +  G+   V V N
Sbjct: 94  PEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSN 153

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMS 355
            LV+MYA+CG +  +R VF     +D VSWN ++SG  + G  ++ +  F  MRR G+  
Sbjct: 154 SLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGL 213

Query: 356 SNFSLISTLSSCA-SLGWIM-LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
           ++F+L S +  CA S   +M +   +HG  +K G DSDV +++A++ +YA  G LS  + 
Sbjct: 214 NSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVA 273

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVS-----EAVKYYLDMRRAGWSPNGVTFINILAA 468
           +F  + + + V +N++I      EA V      EA+  Y +++  G  P   TF +++ A
Sbjct: 274 LFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRA 333

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
            +     + G Q+H QV+K+    +  I +AL+  Y   G M+D  + F  +  ++D V+
Sbjct: 334 CNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVP-KQDVVT 392

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           W +MISG + NEL  +A+ L   ++  G + D FT ++V++ACAS+A    G ++     
Sbjct: 393 WTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFAT 452

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
           ++       +G++ + MY++ G +  A R F  M   ++ SW+++IS +A+HG    AL 
Sbjct: 453 KSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALR 512

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
            F++M     +P+ +TF+GVL+ACSH GLVDEG K++++M + Y L P ++  +C+VDLL
Sbjct: 513 FFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLL 572

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
           GRAG L   E FI         +IWR++L A CR + R  E G+  A+ + E++P ++ +
Sbjct: 573 GRAGRLADAEAFIRDSIFHDEPVIWRSLL-ASCRIH-RDMERGQLVADRIMELQPSSSAS 630

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
           YV L N+Y   G+    +K R  MKE  VKKE G SW+ ++ GVH FVAGD+SHPE + I
Sbjct: 631 YVNLYNIYLDAGELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAI 690

Query: 829 YEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR-NSKLPIRI 887
           Y KL E+  K+ D            D    +++  +++HSEK+AVA  L       PIR+
Sbjct: 691 YSKLAEMLSKI-DKLTATDASSTKSDDTIRNEQSWMNWHSEKLAVALGLIHLPQSAPIRV 749

Query: 888 MKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           MKNLRVC DCH   K ISK   REIVLRD+ RFHHF DG CSC DYW
Sbjct: 750 MKNLRVCRDCHLTMKLISKSEKREIVLRDAIRFHHFRDGSCSCADYW 796



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 182/702 (25%), Positives = 309/702 (44%), Gaps = 106/702 (15%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           + A   H  I++   +  +FL NTL+  Y R+G    A +L DEMP  N+VS+  ++  Y
Sbjct: 31  RHAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNAVSFNLLIDAY 88

Query: 62  THKGMSNEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           +  G    + + F    R AG   +R+   + L AC   G    + G  VH L +     
Sbjct: 89  SRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGR--LREGKAVHALSVLEGIA 146

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
               VSN L++MY  C +    AR++F+  + RD +SWN+++S Y + G    + ++F+ 
Sbjct: 147 GGVFVSNSLVSMYARCGDMGQ-ARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAM 205

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M+R G    +  N +  GS+I     S      +   +   V KAG  SD+++ SA+V  
Sbjct: 206 MRRSG----IGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGM 261

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------- 274
           +A+ G    A  +F+ ++  NVV  N ++ G  +                          
Sbjct: 262 YAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGME 321

Query: 275 ---------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
                                GK++HG +++        +G+ L+++Y   G ++D    
Sbjct: 322 PTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRC 381

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           F  +  +D V+W  MISG  QN  +E A+  F  +   GL    F++ S +++CASL   
Sbjct: 382 FTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVA 441

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
             G+QI     K G     ++ N+ + +YA +G +   ++ F  M  HD VSW++VI + 
Sbjct: 442 RTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSH 501

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE 493
           A       +A++++ +M  A   PN +TF+ +L A S   +   G + + + +K   A  
Sbjct: 502 A-QHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYY-ETMKEEYALS 559

Query: 494 TTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDE-VSWNSMI-SGYIHNELLPKAMNLV 549
            TI++   ++   G+ G + D E  F R S   DE V W S++ S  IH +         
Sbjct: 560 PTIKHCTCVVDLLGRAGRLADAEA-FIRDSIFHDEPVIWRSLLASCRIHRD--------- 609

Query: 550 WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
              M+RGQ +                  +R ME+      + +         L ++Y   
Sbjct: 610 ---MERGQLV-----------------ADRIMELQPSSSASYVN--------LYNIYLDA 641

Query: 610 GRIDYASRFFDLMPVRNV-----YSWNSMISGYARHGHGDKA 646
           G +  AS+  D+M  R V      SW  + SG      GDK+
Sbjct: 642 GELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFVAGDKS 683



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 132/579 (22%), Positives = 265/579 (45%), Gaps = 69/579 (11%)

Query: 93  LRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIET 152
           LR+C     S  +    VH  +++++ +    + N L+A Y         ARR+ +E+  
Sbjct: 24  LRSC-----SAPRHAAAVHAHIVRAHPSPSLFLRNTLLAAY---CRLGGHARRLLDEMPR 75

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS--VLS 210
            + +S+N +I  YS+ G   +  + F+R +R      ++ + +T+ + + A   +  +  
Sbjct: 76  TNAVSFNLLIDAYSRAGQPEASLETFARARRSA---GVRADRFTYAAALAACSRAGRLRE 132

Query: 211 GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
           G    + + A+    G+   ++V ++LVS +AR G+   AR++F+   +++ VS N L+ 
Sbjct: 133 G----KAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVS 188

Query: 271 G-----------------RRKG--------------------------KEVHGYLIRSGL 287
           G                 RR G                            VHG ++++G 
Sbjct: 189 GYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGF 248

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN------GCYEEA 341
              V + + +V MYAK G + ++ ++F+ ++  + V +N MI+GL ++          EA
Sbjct: 249 DSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREA 308

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +  +  ++  G+  + F+  S + +C   G I  G+QIHG+ LK     D  + +AL+ L
Sbjct: 309 LSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDL 368

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y ++G +    + F  +P+ D V+W ++I     +E L   A+  + ++  AG  P+  T
Sbjct: 369 YLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNE-LFERALTLFHELLGAGLKPDPFT 427

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
             +++ A +S ++ + G Q+     K      T + N+ +  Y + G++    + F  M 
Sbjct: 428 ISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEM- 486

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
           E  D VSW+++IS +  +     A+     M+      +  TF  VL+AC+    ++ G+
Sbjct: 487 ESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGL 546

Query: 582 EVHAC-GVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           + +        L   +   + +VD+  + GR+  A  F 
Sbjct: 547 KYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFI 585


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 249/664 (37%), Positives = 380/664 (57%), Gaps = 13/664 (1%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNM--YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           K++H  ++R+GLF      + +V      + G++  +R VF  +    S + N++I G  
Sbjct: 5   KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
               ++EA++ +  M   GL+   ++  S   SC +      G+QIH    KLG  SD  
Sbjct: 65  DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFASDTY 121

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
             N L+++Y++ G L    KVF  M +   VSW ++IG  A  +   +EAV+ +  M ++
Sbjct: 122 AQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQ-PNEAVRLFDRMMKS 180

Query: 454 -GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
               PN VT +N+L A +      +  ++H  + ++       +   L+  Y KCG +  
Sbjct: 181 ENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQL 240

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
              +F +  E+ +  SWN MI+G++ +    +A+ L   M  +G + D  T A++L AC 
Sbjct: 241 ARDLFDKAQEK-NLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACT 299

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
            +  LE G  +HA   +  ++ DV +G+ALVDMY+KCG I+ A + F  MP ++V +W +
Sbjct: 300 HLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTA 359

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           +I G A  G  + AL  F +M + G  PD +TFVGVL+ACSHAG VDEG  HF SMS  Y
Sbjct: 360 LILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTY 419

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELG 751
           G+ P +E +  +VD+LGRAG + + EE I  MP+ P+  +   +LGAC    N    E  
Sbjct: 420 GIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGN---LEAA 476

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
            +AA  L E++P ++  YVLL+N+Y S  KWE+  + R+ M E  ++K  GCS + +   
Sbjct: 477 ERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGV 536

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
           VH FV GD SH +   I E L+++  K+++AGYVP     LFD+  E KE  +S HSEK+
Sbjct: 537 VHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKL 596

Query: 872 AVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           A+AF +L+ +   PIR++KNLR+C DCHSA K ISK+  REI++RD NRFHHF DG CSC
Sbjct: 597 AIAFGLLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCSC 656

Query: 931 GDYW 934
             +W
Sbjct: 657 RGFW 660



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 215/477 (45%), Gaps = 64/477 (13%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINV--YVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           K  H Q+L+ G  +D F  + ++        G L  A  +F ++P+  S +   I+ G T
Sbjct: 5   KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            K +  EA   ++EM+  G + +RY   S+ ++C+         G Q+HC   K     D
Sbjct: 65  DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE-----GKQIHCHSTKLGFASD 119

Query: 123 GLVSNVLIAMYGSCLESTDC---ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
               N L+ MY +C     C   AR++F+++E + ++SW ++I V++Q        +LF 
Sbjct: 120 TYAQNTLMNMYSNC----GCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFD 175

Query: 180 RMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           RM +     ++KPNE T  +++TA A +  L+   ++++I   + + G    + + + L+
Sbjct: 176 RMMKS---ENVKPNEVTLVNVLTACARARDLA---MVKRIHEYIDEHGFGRHVVLNTVLM 229

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------ 274
             + + G    AR +F++  +KN+ S N ++ G  +                        
Sbjct: 230 DVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKV 289

Query: 275 -----------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                            GK +H Y+ +  +   VA+G  LV+MYAKCG+I+ +  VF  M
Sbjct: 290 TMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEM 349

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG- 376
             KD ++W  +I GL   G  E A+  F  M   G+     + +  L++C+  G++  G 
Sbjct: 350 PEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGI 409

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
              +      G+   +     L+ +   AG ++   ++   MP   DQ     ++GA
Sbjct: 410 SHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGA 466



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 139/272 (51%), Gaps = 10/272 (3%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S + K  H    K GFA D +  NTL+N+Y   G L SA K+FD+M D+  VSWA ++  
Sbjct: 101 SSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGV 160

Query: 61  YTHKGMSNEACKMFKEMVRA-GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           +      NEA ++F  M+++     N   L +VL AC            ++H  + +   
Sbjct: 161 HAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARA--RDLAMVKRIHEYIDEHGF 218

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
               +++ VL+ +Y  C      AR +F++ + ++L SWN +I+ + +  +      LF 
Sbjct: 219 GRHVVLNTVLMDVYCKC-GCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFR 277

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            MQ +G    +K ++ T  SL+ A   + L    L + + A +KK  +  D+ +G+ALV 
Sbjct: 278 EMQTKG----IKGDKVTMASLLLAC--THLGALELGKWLHAYIKKQRIDVDVALGTALVD 331

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
            +A+ G+   A ++F +M +K+V++   L+ G
Sbjct: 332 MYAKCGSIETAIQVFHEMPEKDVMTWTALILG 363


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 263/739 (35%), Positives = 400/739 (54%), Gaps = 61/739 (8%)

Query: 255 EQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
           +     +V+   G +   R G   HG +  +G    V + N LV MY++CG+++++  +F
Sbjct: 161 DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 220

Query: 315 RFMIGK---DSVSWNTMISGLDQNGCYEEAIMNFCAM------RRDGLMSSNFSLISTLS 365
             +  +   D +SWN+++S   ++     A+  F  M      +     S   S+++ L 
Sbjct: 221 DEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILP 280

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           +C SL  +   +++HG  ++ G   DV V NAL+  YA  G +   +KVF +M   D VS
Sbjct: 281 ACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVS 340

Query: 426 WNSVIGAFADS-------------------------EALVS---------EAVKYYLDMR 451
           WN+++  ++ S                          A+++         EA+  +  M 
Sbjct: 341 WNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMI 400

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN----------ETTIENALL 501
            +G  PN VT I++L+A +S      G ++HA  +K  +            +  + NAL+
Sbjct: 401 FSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 460

Query: 502 SCYGKCGEMDDCEKIFARMS-ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR--GQR 558
             Y KC        IF  +  E R+ V+W  MI G+        A+ L   M+    G  
Sbjct: 461 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 520

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACL--EFDVVIGSALVDMYSKCGRIDYAS 616
            + +T + +L ACA +A +  G ++HA  +R          + + L+DMYSKCG +D A 
Sbjct: 521 PNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTAR 580

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
             FD M  ++  SW SM++GY  HG G +AL +F +M+  G +PD +TF+ VL ACSH G
Sbjct: 581 HVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCG 640

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
           +VD+G  +F SMS  YGL P+ E ++C +DLL R+G LDK    +  MP+ P +++W  +
Sbjct: 641 MVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVAL 700

Query: 737 LGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAE 796
           L A CR +    EL   A N L EM  +N  +Y L++N+YA+ G+W+DVA+ R  MK++ 
Sbjct: 701 LSA-CRVH-SNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSG 758

Query: 797 VKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLE 856
           +KK  GCSWV  + G   F  GD SHP    IY  L+ L  +++  GYVP+T FAL D++
Sbjct: 759 IKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVD 818

Query: 857 PESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLR 915
            E K +L+  HSEK+A+A+ +LT +   PIRI KNLRVCGDCHSAF +ISKIV  EIV+R
Sbjct: 819 EEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVR 878

Query: 916 DSNRFHHFNDGKCSCGDYW 934
           D +RFHHF +G CSCG YW
Sbjct: 879 DPSRFHHFKNGSCSCGGYW 897



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 170/649 (26%), Positives = 295/649 (45%), Gaps = 65/649 (10%)

Query: 26  LINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLN 85
           ++  Y+  G    A  + + +    +V W  ++  +  +G  + A  +   M+RAG   +
Sbjct: 102 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 161

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
            + L  VL+AC E  PS ++ G   H L+  +    +  + N L+AMY  C  S + A  
Sbjct: 162 HFTLPHVLKACGEL-PS-YRCGSAFHGLICCNGFESNVFICNALVAMYSRC-GSLEEASM 218

Query: 146 IFEEIETR---DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           IF+EI  R   D+ISWNSI+S + +  +  +   LFS+M                  +  
Sbjct: 219 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 278

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
                 L      +++     + G   D++VG+AL+  +A+ G    A K+F  M  K+V
Sbjct: 279 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 338

Query: 263 VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM----I 318
           VS N ++ G                             Y++ G  + +  +F+ M    I
Sbjct: 339 VSWNAMVAG-----------------------------YSQSGNFEAAFELFKNMRKENI 369

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
             D V+W  +I+G  Q GC  EA+  F  M   G + +  ++IS LS+CASLG    G +
Sbjct: 370 PLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTE 429

Query: 379 IHGEGLKL----------GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP--EHDQVSW 426
           IH   LK           G D D+ V NAL+ +Y+          +F  +P  E + V+W
Sbjct: 430 IHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTW 489

Query: 427 NSVIGA---FADSEALVSEAVKYYLDM--RRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
             +IG    + DS    ++A+K +++M     G +PN  T   IL A +  +  ++G Q+
Sbjct: 490 TVMIGGHAQYGDS----NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 545

Query: 482 HAQVIKYNVANETT--IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           HA V++++    +   + N L+  Y KCG++D    +F  MS+ +  +SW SM++GY  +
Sbjct: 546 HAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQ-KSAISWTSMMTGYGMH 604

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-VHACGVRACLEFDVVI 598
               +A+++   M + G   D  TF  VL AC+    +++G+    +      L      
Sbjct: 605 GRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEH 664

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKA 646
            +  +D+ ++ GR+D A R    MP+      W +++S    H + + A
Sbjct: 665 YACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELA 713



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 225/498 (45%), Gaps = 73/498 (14%)

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           ++G G+V  Y  CG  D +  V   +    +V WN +I    + G  + AI   C M R 
Sbjct: 97  SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 156

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G    +F+L   L +C  L     G   HG     G +S+V + NAL+++Y+  G L   
Sbjct: 157 GTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 216

Query: 412 LKVFFLMPEH---DQVSWNSVIGAFADSEALVSEAVKYYLDM------RRAGWSPNGVTF 462
             +F  + +    D +SWNS++ A   S    + A+  +  M      +      + ++ 
Sbjct: 217 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWT-ALDLFSKMTLIVHEKPTNERSDIISI 275

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
           +NIL A  S        +VH   I+     +  + NAL+  Y KCG M++  K+F  M E
Sbjct: 276 VNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVF-NMME 334

Query: 523 RRDEVSWNSMISGY---------------IHNELLP--------------------KAMN 547
            +D VSWN+M++GY               +  E +P                    +A+N
Sbjct: 335 FKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALN 394

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL----------EFDVV 597
           L   M+  G   +  T  +VLSACAS+    +G E+HA  ++ CL          + D++
Sbjct: 395 LFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLM 454

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPV--RNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
           + +AL+DMYSKC     A   FD +P+  RNV +W  MI G+A++G  + AL LF +M  
Sbjct: 455 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS 514

Query: 656 D--GPLPDHVTFVGVLSACSHAGLVDEG-------FKHFKSMSQVYGLIPQLEQFSCMVD 706
           +  G  P+  T   +L AC+H   +  G        +H +  S  Y +       +C++D
Sbjct: 515 EPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVA------NCLID 568

Query: 707 LLGRAGELDKIEEFINKM 724
           +  + G++D      + M
Sbjct: 569 MYSKCGDVDTARHVFDSM 586



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 145/580 (25%), Positives = 254/580 (43%), Gaps = 84/580 (14%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR---NSVSWACIVSGYTH 63
           FH  I  +GF  +VF+CN L+ +Y R G L  AS +FDE+  R   + +SW  IVS +  
Sbjct: 184 FHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVK 243

Query: 64  KGMSNEACKMFKEM---VRAGFLLNRYALGSVLRACQECGP-SGFKFGMQVHCLVLKSNQ 119
              +  A  +F +M   V       R  + S++     CG         +VH   +++  
Sbjct: 244 SSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGT 303

Query: 120 TFDGLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
             D  V N LI  Y  C  +E+   A ++F  +E +D++SWN++++ YSQ G+  + F+L
Sbjct: 304 FPDVFVGNALIDAYAKCGLMEN---AVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFEL 360

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F  M++E                                             D+   +A+
Sbjct: 361 FKNMRKENIPL-----------------------------------------DVVTWTAV 379

Query: 238 VSGFARLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRRKGKEVHGYLIRSGL 287
           ++G+++ G  + A  +F QMI            +V+S    +    +G E+H Y +++ L
Sbjct: 380 IAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCL 439

Query: 288 FDM----------VAVGNGLVNMYAKCGTIDDSRSVFR--FMIGKDSVSWNTMISGLDQN 335
             +          + V N L++MY+KC +   +RS+F    +  ++ V+W  MI G  Q 
Sbjct: 440 LTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQY 499

Query: 336 GCYEEAIMNFCAMRRD--GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL--DSD 391
           G   +A+  F  M  +  G+  + +++   L +CA L  I +G+QIH   L+      S 
Sbjct: 500 GDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSA 559

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
             V+N L+ +Y+  G +     VF  M +   +SW S++  +       SEA+  +  MR
Sbjct: 560 YFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYG-MHGRGSEALDIFDKMR 618

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
           +AG+ P+ +TF+ +L A S   M   G     +    Y +          +    + G +
Sbjct: 619 KAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRL 678

Query: 511 DDCEKIFARMSERRDEVSWNSMISG-YIHN--ELLPKAMN 547
           D   +    M      V W +++S   +H+  EL   A+N
Sbjct: 679 DKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALN 718



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 130/552 (23%), Positives = 225/552 (40%), Gaps = 114/552 (20%)

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           S  S+   +++ Y   G     L V   +     V WN +I        L S A+     
Sbjct: 94  SPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDS-AINVSCR 152

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M RAG  P+  T  ++L A       + G   H  +      +   I NAL++ Y +CG 
Sbjct: 153 MLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 212

Query: 510 MDDCEKIFARMSER--RDEVSWNSMISGYIHN-------ELLPKAMNLVWFMMQRGQRLD 560
           +++   IF  +++R   D +SWNS++S ++ +       +L  K M L+       +R D
Sbjct: 213 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSK-MTLIVHEKPTNERSD 271

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
             +   +L AC S+  + +  EVH   +R     DV +G+AL+D Y+KCG ++ A + F+
Sbjct: 272 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 331

Query: 621 LMPVRNVYSWNSMISGYARHGH-----------------------------------GDK 645
           +M  ++V SWN+M++GY++ G+                                     +
Sbjct: 332 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 391

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF----------------------- 682
           AL LF QM   G LP+ VT + VLSAC+  G   +G                        
Sbjct: 392 ALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDE 451

Query: 683 ---------------KHFKSMSQVYGLIPQLEQ----FSCMVDLLGRAGEL-DKIEEFIN 722
                          + FK+   ++  IP  E+    ++ M+    + G+  D ++ F+ 
Sbjct: 452 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 511

Query: 723 KMP----ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVL---LANM 775
            +     + PN+     +L AC  A+     +G++    +       +  Y +   L +M
Sbjct: 512 MISEPYGVAPNAYTISCILMAC--AHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDM 569

Query: 776 YASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKEL 835
           Y+  G   DV  AR       + +++  SW +M  G  +   G E+            ++
Sbjct: 570 YSKCG---DVDTARHVFD--SMSQKSAISWTSMMTGYGMHGRGSEA-----------LDI 613

Query: 836 NQKMRDAGYVPQ 847
             KMR AG+VP 
Sbjct: 614 FDKMRKAGFVPD 625



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 172/371 (46%), Gaps = 68/371 (18%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIV------ 58
           K  H   +++G   DVF+ N LI+ Y + G + +A K+F+ M  ++ VSW  +V      
Sbjct: 292 KEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQS 351

Query: 59  -----------------------------SGYTHKGMSNEACKMFKEMVRAGFLLNRYAL 89
                                        +GY+ +G S+EA  +F++M+ +G L N   +
Sbjct: 352 GNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTI 411

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKS-----NQTFDG-----LVSNVLIAMYGSCLES 139
            SVL AC   G   F  G ++H   LK+     +  F G     +V N LI MY  C  S
Sbjct: 412 ISVLSACASLG--AFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKC-RS 468

Query: 140 TDCARRIFEEI--ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
              AR IF++I  E R++++W  +I  ++Q GD+    KLF  M  E   Y + PN YT 
Sbjct: 469 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE--PYGVAPNAYTI 526

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLL--SDLYVGSALVSGFARLGNFYYARKIFE 255
             ++ A   + L+   + +QI A V +      S  +V + L+  +++ G+   AR +F+
Sbjct: 527 SCILMAC--AHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFD 584

Query: 256 QMIQKNVVSMNGLMEG---RRKGKE---VHGYLIRSGLF-DMVAVGNGLVNMYA--KCGT 306
            M QK+ +S   +M G     +G E   +   + ++G   D +     LV +YA   CG 
Sbjct: 585 SMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITF---LVVLYACSHCGM 641

Query: 307 IDDSRSVFRFM 317
           +D   S F  M
Sbjct: 642 VDQGLSYFDSM 652


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 258/658 (39%), Positives = 382/658 (58%), Gaps = 5/658 (0%)

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +H + I  G    V VG+ LV++Y K   +  +R VF  M  +D+V WNTMI+GL +N C
Sbjct: 130 LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCC 189

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
           ++++I  F  M  DG+   + ++ + L + A L  + +G  I    LK+G      V   
Sbjct: 190 FDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTG 249

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+SLY+  G ++    +F  +   D +++N++I  F  +      +VK + ++  +G   
Sbjct: 250 LISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFT-ANGGTECSVKLFRELLFSGERV 308

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           +  T + ++   S F    L   +H   +K  +    T+  A  + Y K  E+D    +F
Sbjct: 309 SSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLF 368

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
              S  +  V+WN+MISGY  N     A++L   MM+     +  T  T+LSACA + +L
Sbjct: 369 DE-SPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSL 427

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
             G  VH       LE ++ + +ALVDMY+KCG I  A + FD M  +N  +WN+MI GY
Sbjct: 428 SFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGY 487

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
             HG+G +AL L+++M   G  P  VTF+ VL ACSHAGLV EG + F +M   Y + P 
Sbjct: 488 GLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPL 547

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
           +E ++CMVD+LGR+G+L+K  EFI KMP+ P   +W T+LGAC     + T++ R A+  
Sbjct: 548 IEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIH--KDTDIARLASER 605

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           LFE++P +   YVLL+N+Y+    +   A  R+ +K+ ++ K  GC+ + +    HVFV+
Sbjct: 606 LFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVS 665

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-V 876
           GD SH     IY KL++L  KMR+ GY  +T  AL D+E E KE  V+ HSEK+A+AF +
Sbjct: 666 GDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGL 725

Query: 877 LTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +T      IRI+KNLRVC DCH+A KFISKI  R IV+RD+NRFHHF DG CSCGDYW
Sbjct: 726 ITTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 214/480 (44%), Gaps = 64/480 (13%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K   L H   +  G+  +VF+ + L+++Y +   +  A K+FD MP+R++V W  +++G 
Sbjct: 125 KHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGL 184

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                 +++ ++F+EMV  G  ++   + +VL A  E      K GM + CL LK    F
Sbjct: 185 VKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAEL--QELKVGMGIQCLALKIGFGF 242

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V   LI++Y  C +  + AR +F  I   DLI++N++IS ++  G T    KLF  +
Sbjct: 243 CDYVLTGLISLYSKCGD-VNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFREL 301

Query: 182 QREGFRYS------LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS 235
              G R S      L P    FG L            +L   I     K+G++ +  V +
Sbjct: 302 LFSGERVSSSTIVGLIPLHSPFGHL------------HLACSIHGFCVKSGIILNPTVST 349

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK--------------------- 274
           A  + + +L     AR +F++  +K VV+ N ++ G  +                     
Sbjct: 350 AFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTP 409

Query: 275 --------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                               GK VH  +    L   + V   LV+MYAKCG I ++  +F
Sbjct: 410 NAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLF 469

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             M  K++V+WNTMI G   +G   EA+  +  M   G   S  + +S L +C+  G + 
Sbjct: 470 DSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVG 529

Query: 375 LGQQI-HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            G++I H    K  ++  +     ++ +   +G L + L+    MP E     W +++GA
Sbjct: 530 EGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGA 589



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 130/533 (24%), Positives = 223/533 (41%), Gaps = 68/533 (12%)

Query: 352 GLMSSN--FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
           G +S N  FSLI+  S+   L       Q H + +  G   D++    L     D     
Sbjct: 8   GKLSRNTLFSLINKASTFPHLA------QTHAQFILNGYRFDLATLTKLTQKLFDFSATR 61

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR-AGWSPNGVTFINILAA 468
               +FF +P+ D   +N ++  F+ +++  S ++  Y  +RR    SP+  T+   +AA
Sbjct: 62  HARALFFSVPKPDIFLFNVLVRGFSLNDS-PSSSISLYTHLRRNTNLSPDNFTYAFAVAA 120

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
            S+     L   +HA  I     +   + +AL+  Y K   +    K+F  M E RD V 
Sbjct: 121 CSNDKHLML---LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPE-RDTVL 176

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           WN+MI+G + N     ++ L   M+  G R+D  T   VL A A +  L+ GM +    +
Sbjct: 177 WNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLAL 236

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
           +    F   + + L+ +YSKCG ++ A   F  +   ++ ++N+MISG+  +G  + ++ 
Sbjct: 237 KIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVK 296

Query: 649 LFSQMKLDGPLPDHVTFVGVLS----------ACS-HAGLVDEGFKHFKSMSQVYGLI-- 695
           LF ++   G      T VG++           ACS H   V  G     ++S  +  I  
Sbjct: 297 LFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYN 356

Query: 696 ---------------PQ--LEQFSCMVDLLGRAGELDKIEEFINKM---PITPNSLIWRT 735
                          P+  +  ++ M+    + G  +       +M     TPN++   T
Sbjct: 357 KLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITT 416

Query: 736 VLGACCRANCRKTELGRKAANMLF--EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMK 793
           +L AC  A       G+   +++    +EP   V+  L+ +MYA  G   +  +   +M 
Sbjct: 417 ILSAC--AQLGSLSFGKWVHHLIKSENLEPNIYVSTALV-DMYAKCGNISEAWQLFDSMS 473

Query: 794 EAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVP 846
           E         +W TM  G  +   G          +E LK  N+ M   GY P
Sbjct: 474 EKNT-----VTWNTMIFGYGLHGYG----------HEALKLYNE-MLHLGYNP 510


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 254/732 (34%), Positives = 403/732 (55%), Gaps = 68/732 (9%)

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
           L++ +A+ G    AR++F++M   N+ + N L+                           
Sbjct: 54  LLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSA------------------------- 88

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM-RRDGLMS 355
                A    + D   +F  M  +D+VS+N +I+G    G    ++  + A+ R + +  
Sbjct: 89  ----LAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRP 144

Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY-------- 407
           +  +L + +   ++L    LG  +H + L+LG  +   V + L+ +YA  G         
Sbjct: 145 TRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVF 204

Query: 408 -----------------LSRCLKV------FFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
                            L RC  +      F LM + D ++W +++     +  L  EA+
Sbjct: 205 QEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQN-GLQLEAL 263

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
             +  MR  G   +  TF +IL A  + +  + G Q+HA + +    +   + +AL+  Y
Sbjct: 264 DVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMY 323

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            KC  +   E +F RM+ R + +SW +MI GY  N    +A+     M   G + D FT 
Sbjct: 324 SKCRSIRLAEAVFRRMTCR-NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTL 382

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
            +V+S+CA++A+LE G + H   + + L   + + +ALV +Y KCG I+ A R FD M  
Sbjct: 383 GSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF 442

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
            +  SW ++++GYA+ G   + + LF +M  +G  PD VTF+GVLSACS AGLV++G  +
Sbjct: 443 HDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDY 502

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRA 743
           F SM + +G++P  + ++CM+DL  R+G   + EEFI +MP +P++  W T+L +C  R 
Sbjct: 503 FDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562

Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
           N    E+G+ AA  L E +PQN  +YVLL +M+A+ G+W +VA  R+ M++ +VKKE GC
Sbjct: 563 N---MEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGC 619

Query: 804 SWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDL 863
           SW+  K+ VH+F A D+SHP    IYEKL+ LN KM + GY P     L D+    K  +
Sbjct: 620 SWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHM 679

Query: 864 VSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHH 922
           +S+HSEK+A+AF ++    ++PIRI+KNLRVC DCH+A KFISKI GR+I++RD+ RFH 
Sbjct: 680 ISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHK 739

Query: 923 FNDGKCSCGDYW 934
           F+DG CSCGD+W
Sbjct: 740 FSDGTCSCGDFW 751



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 161/592 (27%), Positives = 281/592 (47%), Gaps = 82/592 (13%)

Query: 83  LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN-QTFDGLVSNVLIAMYGSCLESTD 141
           L NRYA   +  A  + G +G +    VHCL+LK+  Q     + N L+  Y        
Sbjct: 8   LCNRYA-AILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLAR 66

Query: 142 CARRIFEE-------------------------------IETRDLISWNSIISVYSQRGD 170
            ARR+F+E                               +  RD +S+N++I+ +S  G 
Sbjct: 67  -ARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGS 125

Query: 171 TISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD 230
                +L+  + RE    S++P   T  ++I  A  S LS   L   +   V + G  + 
Sbjct: 126 PARSVQLYRALLRE---ESVRPTRITLSAMIMVA--SALSDRALGHSVHCQVLRLGFGAY 180

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDM 290
            +VGS LV  +A++G    AR++F++M  K VV  N L+ G          L+R      
Sbjct: 181 AFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITG----------LLR------ 224

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
                        C  I+D++ +F+ M+ +DS++W TM++GL QNG   EA+  F  MR 
Sbjct: 225 -------------CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRA 271

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
           +G+    ++  S L++C +L  +  G+QIH    +   + +V V +AL+ +Y+    +  
Sbjct: 272 EGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRL 331

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
              VF  M   + +SW ++I  +  + A   EAV+ + +M+  G  P+  T  +++++ +
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQN-ACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCA 390

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
           + +  + G Q H   +   +    T+ NAL++ YGKCG ++D  ++F  MS   D+VSW 
Sbjct: 391 NLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMS-FHDQVSWT 449

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           ++++GY       + ++L   M+  G + D  TF  VLSAC+    +E+G     C    
Sbjct: 450 ALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKG-----CDYFD 504

Query: 591 CLEFD---VVIG---SALVDMYSKCGRIDYASRFFDLMP-VRNVYSWNSMIS 635
            ++ D   V I    + ++D+YS+ GR   A  F   MP   + + W +++S
Sbjct: 505 SMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 128/544 (23%), Positives = 222/544 (40%), Gaps = 132/544 (24%)

Query: 4   AKLFHLQILKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMP--------------- 47
           A   H  ILK    A   FL N L+  Y + G LA A ++FDEMP               
Sbjct: 31  AGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALA 90

Query: 48  ----------------DRNSVSWACIVSGYTHKGMSNEACKMFKEMVR-AGFLLNRYALG 90
                           +R++VS+  +++G++  G    + ++++ ++R       R  L 
Sbjct: 91  HSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLS 150

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           +++        S    G  VHC VL+        V + L+ MY       D ARR+F+E+
Sbjct: 151 AMIMVASAL--SDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRD-ARRVFQEM 207

Query: 151 ET-------------------------------RDLISWNSIISVYSQRGDTISVFKLFS 179
           E                                RD I+W ++++  +Q G  +    +F 
Sbjct: 208 EAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFR 267

Query: 180 RMQREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           RM+ EG    +  ++YTFGS++TA  A +++  G    +QI A + +     +++VGSAL
Sbjct: 268 RMRAEG----VGIDQYTFGSILTACGALAALEEG----KQIHAYITRTWYEDNVFVGSAL 319

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------- 272
           V  +++  +   A  +F +M  +N++S   ++ G                          
Sbjct: 320 VDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDD 379

Query: 273 ----------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                            +G + H   + SGL   + V N LV +Y KCG+I+D+  +F  
Sbjct: 380 FTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDE 439

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M   D VSW  +++G  Q G  +E I  F  M  +GL     + I  LS+C+  G +  G
Sbjct: 440 MSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKG 499

Query: 377 -------QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH-DQVSWNS 428
                  Q+ HG    + +D   +    ++ LY+ +G      +    MP   D   W +
Sbjct: 500 CDYFDSMQKDHG---IVPIDDHYT---CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWAT 553

Query: 429 VIGA 432
           ++ +
Sbjct: 554 LLSS 557



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 20/262 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ K  H  I +  +  +VF+ + L+++Y +   +  A  +F  M  RN +SW  ++ GY
Sbjct: 295 EEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGY 354

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                S EA + F EM   G   + + LGSV+ +C     +  + G Q HCL L S    
Sbjct: 355 GQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANL--ASLEEGAQFHCLALVSGLMR 412

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              VSN L+ +YG C  S + A R+F+E+   D +SW ++++ Y+Q G       LF +M
Sbjct: 413 YITVSNALVTLYGKC-GSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKM 471

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ----ILAMVKKAGL--LSDLYVGS 235
              G    LKP+  TF  +++A      S + L+++      +M K  G+  + D Y  +
Sbjct: 472 LANG----LKPDGVTFIGVLSAC-----SRAGLVEKGCDYFDSMQKDHGIVPIDDHY--T 520

Query: 236 ALVSGFARLGNFYYARKIFEQM 257
            ++  ++R G F  A +  +QM
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQM 542



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 11/169 (6%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           FH   L  G    + + N L+ +Y + G +  A +LFDEM   + VSW  +V+GY   G 
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           + E   +F++M+  G   +      VL AC   G       ++  C    S Q   G+V 
Sbjct: 461 AKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGL------VEKGCDYFDSMQKDHGIVP 514

Query: 127 -----NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD 170
                  +I +Y       +    I +   + D   W +++S    RG+
Sbjct: 515 IDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGN 563


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 266/653 (40%), Positives = 383/653 (58%), Gaps = 22/653 (3%)

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           N L+N YAK   I  +R VF  +   D VS+NT+I+     G    A+  F  +R     
Sbjct: 79  NTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFG 138

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
              F+L   + +C     + L +Q+H   +  G D   SV+NA+L+ Y+  G+L+   +V
Sbjct: 139 LDGFTLSGVIIACGDD--VGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRV 196

Query: 415 FFLMPE---HDQVSWNSVIGAFADS-EALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
           F  M E    D+VSWN++I A     E L  EAV+ + +M R G   +  T  ++L A +
Sbjct: 197 FREMGEGGGRDEVSWNAMIVACGQHREGL--EAVELFREMVRRGLKVDMFTMASVLTAFT 254

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC-GEMDDCEKIFARMSERRDEVSW 529
                  G Q H  +IK      + + + L+  Y KC G M +C K+F  ++   D V W
Sbjct: 255 CVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAP-DLVLW 313

Query: 530 NSMISGYIHNELLPKAMNLVWF---MMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           N+MISG+   E L +  + +W    M   G   D  +F  V SAC+++++   G +VHA 
Sbjct: 314 NTMISGFSQYEDLSE--DGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHAL 371

Query: 587 GVRACLEFD-VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
            +++ + ++ V + +ALV MYSKCG +  A R FD MP  N+ S NSMI+GYA+HG   +
Sbjct: 372 AIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVE 431

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
           +L LF  M      P+ +TF+ VLSAC H G V+EG K+F  M + + + P+ E +SCM+
Sbjct: 432 SLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMI 491

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN 765
           DLLGRAG+L + E  I  MP  P S+ W T+LGAC +      EL  KAAN   ++EP N
Sbjct: 492 DLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHG--NVELAVKAANEFLQLEPYN 549

Query: 766 AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
           A  YV+L+NMYAS  +WE+ A  ++ M+E  VKK+ GCSW+ +   VHVFVA D SHP  
Sbjct: 550 AAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMI 609

Query: 826 DLIYEKLKELNQKMRDAGYVPQTKFALF---DLEPESKEDLVSYHSEKIAVAFVLTRNSK 882
             I+  + E+ +KM+ AGYVP  ++AL    ++EP+ KE  + YHSEK+AVAF L    +
Sbjct: 610 KEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVAFGLISTEE 669

Query: 883 -LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            +PI ++KNLR+CGDCH+A K IS I GREI +RD++RFH F +G CSCGDYW
Sbjct: 670 WVPILVVKNLRICGDCHNAIKLISAITGREITVRDTHRFHCFKEGHCSCGDYW 722



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 234/509 (45%), Gaps = 71/509 (13%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +VF  NTLIN Y +   +  A ++FDE+P  + VS+  +++ Y  +G    A ++F E+ 
Sbjct: 74  NVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVR 133

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGM--QVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
              F L+ + L  V+ AC      G   G+  Q+HC V+         V+N ++A Y S 
Sbjct: 134 ELRFGLDGFTLSGVIIAC------GDDVGLVRQLHCFVVVCGYDCYASVNNAVLACY-SR 186

Query: 137 LESTDCARRIFEEIET---RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPN 193
               + ARR+F E+     RD +SWN++I    Q  + +   +LF  M R G    LK +
Sbjct: 187 KGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRG----LKVD 242

Query: 194 EYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL-GNFYYA 250
            +T  S++TA      ++ G     Q   M+ K+G   + +VGS L+  +++  G     
Sbjct: 243 MFTMASVLTAFTCVKDLVGG----MQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVEC 298

Query: 251 RKIFEQMIQKNVVSMNGLMEGRRK------------------------------------ 274
           RK+FE++   ++V  N ++ G  +                                    
Sbjct: 299 RKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSN 358

Query: 275 ------GKEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
                 GK+VH   I+S + ++ V+V N LV MY+KCG + D+R VF  M   + VS N+
Sbjct: 359 LSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNS 418

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IHGEGLKL 386
           MI+G  Q+G   E++  F  M +  +  +  + I+ LS+C   G +  GQ+  +    + 
Sbjct: 419 MIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERF 478

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFAD--SEALVSEA 443
            ++ +    + ++ L   AG L    ++   MP     + W +++GA     +  L  +A
Sbjct: 479 RIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKA 538

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSF 472
              +L +     +P  V   N+ A+A+ +
Sbjct: 539 ANEFLQLEPYNAAPY-VMLSNMYASAARW 566



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 5/133 (3%)

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           TF  +L AC +   L  G  +HA   ++ +     + +    +YSKCG +  A   FDL 
Sbjct: 11  TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
              NV+S+N++I+ YA+H     A  +F ++    P PD V++  +++A +  G      
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHLARQVFDEI----PQPDIVSYNTLIAAYADRGECRPAL 126

Query: 683 KHFKSMSQV-YGL 694
           + F  + ++ +GL
Sbjct: 127 RLFAEVRELRFGL 139



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 42/313 (13%)

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           TF N+L A  +      G  +HA   K  +   T + N     Y KCG + + +  F  +
Sbjct: 11  TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSF-DL 69

Query: 521 SERRDEVSWNSMISGYIHNELLPKAM---------------NLVWFMMQRGQ-------- 557
           ++  +  S+N++I+ Y  + L+  A                 L+     RG+        
Sbjct: 70  TQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLF 129

Query: 558 --------RLDHFTFATVLSACASVATLERGMEVHACGVRAC-LEFDVVIGSALVDMYSK 608
                    LD FT + V+ AC     L R +    C V  C  +    + +A++  YS+
Sbjct: 130 AEVRELRFGLDGFTLSGVIIACGDDVGLVRQLH---CFVVVCGYDCYASVNNAVLACYSR 186

Query: 609 CGRIDYASRFFDLMPV---RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
            G ++ A R F  M     R+  SWN+MI    +H  G +A+ LF +M   G   D  T 
Sbjct: 187 KGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTM 246

Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR-AGELDKIEEFINKM 724
             VL+A +    +  G + F  M    G        S ++DL  + AG + +  +   ++
Sbjct: 247 ASVLTAFTCVKDLVGGMQ-FHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEI 305

Query: 725 PITPNSLIWRTVL 737
              P+ ++W T++
Sbjct: 306 A-APDLVLWNTMI 317


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/732 (34%), Positives = 403/732 (55%), Gaps = 68/732 (9%)

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
           L++ +A+ G    AR++F++M   N+ + N L+                           
Sbjct: 54  LLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSA------------------------- 88

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM-RRDGLMS 355
                A    + D   +F  M  +D+VS+N +I+G    G    ++  + A+ R + +  
Sbjct: 89  ----LAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRP 144

Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY-------- 407
           +  +L + +   ++L    LG  +H + L+LG  +   V + L+ +YA  G         
Sbjct: 145 TRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVF 204

Query: 408 -----------------LSRCLKV------FFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
                            L RC  +      F LM + D ++W +++     +  L  EA+
Sbjct: 205 QEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQN-GLQLEAL 263

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
             +  MR  G   +  TF +IL A  + +  + G Q+HA + +    +   + +AL+  Y
Sbjct: 264 DVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMY 323

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            KC  +   E +F RM+ R + +SW +MI GY  N    +A+     M   G + D FT 
Sbjct: 324 SKCRSIRLAEAVFRRMTCR-NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTL 382

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
            +V+S+CA++A+LE G + H   + + L   + + +ALV +Y KCG I+ A R FD M  
Sbjct: 383 GSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF 442

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
            +  SW ++++GYA+ G   + + LF +M ++G  PD VTF+GVLSACS AGLV++G  +
Sbjct: 443 HDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDY 502

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRA 743
           F SM + + ++P  + ++CM+DL  R+G   + EEFI +MP +P++  W T+L +C  R 
Sbjct: 503 FDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562

Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
           N    E+G+ AA  L E +PQN  +YVLL +M+A+ G+W +VA  R+ M++ +VKKE GC
Sbjct: 563 N---MEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGC 619

Query: 804 SWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDL 863
           SW+  K+ VH+F A D+SHP    IYEKL+ LN KM + GY P     L D+    K  +
Sbjct: 620 SWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHM 679

Query: 864 VSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHH 922
           +S+HSEK+A+AF ++    ++PIRI+KNLRVC DCH+A KFISKI GR+I++RD+ RFH 
Sbjct: 680 ISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHK 739

Query: 923 FNDGKCSCGDYW 934
           F+DG CSCGD+W
Sbjct: 740 FSDGTCSCGDFW 751



 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 159/590 (26%), Positives = 280/590 (47%), Gaps = 78/590 (13%)

Query: 83  LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN-QTFDGLVSNVLIAMYGSCLESTD 141
           L NRYA   +  A  + G +G +    VHCL+LK+  Q     + N L+  Y        
Sbjct: 8   LCNRYA-AILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLAR 66

Query: 142 CARRIFEE-------------------------------IETRDLISWNSIISVYSQRGD 170
            ARR+F+E                               +  RD +S+N++I+ +S  G 
Sbjct: 67  -ARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGS 125

Query: 171 TISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD 230
                +L+  + RE    S++P   T  ++I  A  S LS   L   +   V + G  + 
Sbjct: 126 PARSVQLYRALLRE---ESVRPTRITLSAMIMVA--SALSDRALGHSVHCQVLRLGFGAY 180

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDM 290
            +VGS LV  +A++G    AR++F++M  K VV  N L+ G          L+R      
Sbjct: 181 AFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITG----------LLR------ 224

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
                        C  I+D++ +F+ M+ +DS++W TM++GL QNG   EA+  F  MR 
Sbjct: 225 -------------CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRA 271

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
           +G+    ++  S L++C +L     G+QIH    +   + +V V +AL+ +Y+    +  
Sbjct: 272 EGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRL 331

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
              VF  M   + +SW ++I  +  + A   EAV+ + +M+  G  P+  T  +++++ +
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQN-ACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCA 390

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
           + +  + G Q H   +   +    T+ NAL++ YGKCG ++D  ++F  MS   D+VSW 
Sbjct: 391 NLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMS-FHDQVSWT 449

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           ++++GY       + ++L   M+  G + D  TF  VLSAC+    +E+G +      + 
Sbjct: 450 ALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQK- 508

Query: 591 CLEFDVVI----GSALVDMYSKCGRIDYASRFFDLMP-VRNVYSWNSMIS 635
             + D+V      + ++D+YS+ GR   A  F   MP   + + W +++S
Sbjct: 509 --DHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 127/539 (23%), Positives = 217/539 (40%), Gaps = 122/539 (22%)

Query: 4   AKLFHLQILKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMP--------------- 47
           A   H  ILK    A   FL N L+  Y + G LA A ++FDEMP               
Sbjct: 31  AGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALA 90

Query: 48  ----------------DRNSVSWACIVSGYTHKGMSNEACKMFKEMVR-AGFLLNRYALG 90
                           +R++VS+  +++G++  G    + ++++ ++R       R  L 
Sbjct: 91  HSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLS 150

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           +++        S    G  VHC VL+        V + L+ MY       D ARR+F+E+
Sbjct: 151 AMIMVASAL--SDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRD-ARRVFQEM 207

Query: 151 ET-------------------------------RDLISWNSIISVYSQRGDTISVFKLFS 179
           E                                RD I+W ++++  +Q G  +    +F 
Sbjct: 208 EAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFR 267

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           RM+ EG    +  ++YTFGS++TA     L+ S   +QI A + +     +++VGSALV 
Sbjct: 268 RMRAEG----VGIDQYTFGSILTAC--GALAASEEGKQIHAYITRTWYEDNVFVGSALVD 321

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR--------------------------- 272
            +++  +   A  +F +M  +N++S   ++ G                            
Sbjct: 322 MYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFT 381

Query: 273 --------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                          +G + H   + SGL   + V N LV +Y KCG+I+D+  +F  M 
Sbjct: 382 LGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMS 441

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
             D VSW  +++G  Q G  +E I  F  M  +GL     + I  LS+C+  G +  G  
Sbjct: 442 FHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCD 501

Query: 379 IHGEGLKLGLDSDVSVSN----ALLSLYADAGYLSRCLKVFFLMPEH-DQVSWNSVIGA 432
                 K   D D+   +     ++ LY+ +G      +    MP   D   W +++ +
Sbjct: 502 YFDSMQK---DHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 7/203 (3%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S++ K  H  I +  +  +VF+ + L+++Y +   +  A  +F  M  RN +SW  ++ G
Sbjct: 294 SEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVG 353

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y     S EA + F EM   G   + + LGSV+ +C     +  + G Q HCL L S   
Sbjct: 354 YGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANL--ASLEEGAQFHCLALVSGLM 411

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
               VSN L+ +YG C  S + A R+F+E+   D +SW ++++ Y+Q G       LF +
Sbjct: 412 RYITVSNALVTLYGKC-GSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEK 470

Query: 181 MQREGFRYSLKPNEYTFGSLITA 203
           M   G    LKP+  TF  +++A
Sbjct: 471 MLVNG----LKPDGVTFIGVLSA 489



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 23/175 (13%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           FH   L  G    + + N L+ +Y + G +  A +LFDEM   + VSW  +V+GY   G 
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           + E   +F++M+  G   +      VL AC   G            LV K    FD +  
Sbjct: 461 AKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAG------------LVEKGCDYFDSMQK 508

Query: 127 N---VLIAMYGSCLESTDCARRIFEEIE--------TRDLISWNSIISVYSQRGD 170
           +   V I  + +C+         F+E E        + D   W +++S    RG+
Sbjct: 509 DHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGN 563


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 242/630 (38%), Positives = 378/630 (60%), Gaps = 12/630 (1%)

Query: 314  FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
            ++++   +  SWN++I+ L + G   EA+  F ++R+ GL+ +  S   T+ SC++L  +
Sbjct: 1099 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL 1158

Query: 374  MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
            + G+  H +    G ++D+ VS+AL+ +Y+  G L     +F  +P  + VSW S+I  +
Sbjct: 1159 VSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGY 1218

Query: 434  ADSEA------LVSEAVKYYLDMRRAGWSP-NGVTFINILAAASSFSMGKLGHQVHAQVI 486
              +E       L  + ++   ++      P + V  +++L+A S  S   +   VH  V+
Sbjct: 1219 VQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVV 1278

Query: 487  KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAM 546
            K        + N L+  Y KCG+    +K+F  M E +D++SWNSMI+ Y  + L  +A+
Sbjct: 1279 KKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWM-EEKDDISWNSMIAVYAQSGLSGEAL 1337

Query: 547  NLVWFMMQR-GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
             +   M++  G R +  T + VL ACA    L  G  +H   ++  LE++V +G++++DM
Sbjct: 1338 EVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDM 1397

Query: 606  YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
            Y KCGR++ A + FD M  +NV SW +M++GY  HG   +AL +F +M   G  P+++TF
Sbjct: 1398 YCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITF 1457

Query: 666  VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
            V VL+ACSHAGLV+EG+  F +M   Y + P +E + CMVDL GRAG L++    I +M 
Sbjct: 1458 VSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMK 1517

Query: 726  ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDV 785
            + P+ ++W ++LGA CR + +  +LG  AA  LFE++P N   YVLL+N+YA  G+W DV
Sbjct: 1518 MKPDFVVWGSLLGA-CRIH-KNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADV 1575

Query: 786  AKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
             + R  MK  ++ K  G S V +K  VHVF+ GD+ HP  ++IY+ L++L  +++  GYV
Sbjct: 1576 ERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYV 1635

Query: 846  PQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFI 904
            P     L D++ E KE ++  HSEK+AVAF V+       I I+KNLRVCGDCH+  K I
Sbjct: 1636 PNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLI 1695

Query: 905  SKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            SK+V R+ V+RDS RFHHF DG CSCGDYW
Sbjct: 1696 SKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725



 Score =  209 bits (531), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 189/370 (51%), Gaps = 31/370 (8%)

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +QIH + ++ GL +D  ++  L+ LY+  G ++  + +F+ +      +WN +I A    
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRA-NTI 102

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
             L  +A+  Y +M   G + +  TF  ++ A ++F    LG  VH  +IKY  + +  +
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSER------------------------------RDE 526
           +N L+  Y KCG      K+F +M  R                              ++ 
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNV 222

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           VSW +MI+GYI N+   +A+ L   M       + +T  +++ AC  +  L  G  +H  
Sbjct: 223 VSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDY 282

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            ++ C+E  V +G+AL+DMYSKCG I  A   F+ MP +++ +WNSMI+    HG G +A
Sbjct: 283 AIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           L LFS+M+     PD +TF+GVL AC H   V EG  +F  M+Q YG+ P  E + CM +
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTE 402

Query: 707 LLGRAGELDK 716
           L  R+  LD+
Sbjct: 403 LYARSNNLDE 412



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 212/448 (47%), Gaps = 62/448 (13%)

Query: 139  STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
            S++ A   ++ ++  ++ SWNS+I+  ++ GD++   + FS +++ G    L P   +F 
Sbjct: 1091 SSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLG----LIPTRSSFP 1146

Query: 199  SLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
              I   +A   ++SG    QQ        G  +DL+V SAL+  +++ G    AR +F++
Sbjct: 1147 CTIKSCSALCDLVSGRMSHQQAFVF----GFETDLFVSSALIDMYSKCGQLKDARALFDE 1202

Query: 257  MIQKNVVSMNGLMEG--------------------------------------------- 271
            +  +NVVS   ++ G                                             
Sbjct: 1203 IPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACS 1262

Query: 272  RRKGK----EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
            R  GK     VHG++++ G    + VGN L++ YAKCG    S+ VF +M  KD +SWN+
Sbjct: 1263 RVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNS 1322

Query: 328  MISGLDQNGCYEEAIMNFCAM-RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            MI+   Q+G   EA+  F  M R  G+  +  +L + L +CA  G +  G+ IH + +K+
Sbjct: 1323 MIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKM 1382

Query: 387  GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
             L+ +V V  +++ +Y   G +    K F  M E +  SW +++  +        EA+  
Sbjct: 1383 DLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYG-MHGRAKEALDI 1441

Query: 447  YLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYG 505
            +  M RAG  PN +TF+++LAA S   + + G H  +A   KY++         ++  +G
Sbjct: 1442 FYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFG 1501

Query: 506  KCGEMDDCEKIFARMSERRDEVSWNSMI 533
            + G +++   +  RM  + D V W S++
Sbjct: 1502 RAGCLNEAYNLIKRMKMKPDFVVWGSLL 1529



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 230/467 (49%), Gaps = 33/467 (7%)

Query: 229  SDLYVGSALVSGFARLGNFYYARKIFEQMIQ--------------KNVVSMNGLMEGRRK 274
            S+++  +++++  AR G+   A + F  + +              K+  ++  L+ GR  
Sbjct: 1105 SNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMS 1164

Query: 275  GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
             ++   +   + LF    V + L++MY+KCG + D+R++F  +  ++ VSW +MI+G  Q
Sbjct: 1165 HQQAFVFGFETDLF----VSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQ 1220

Query: 335  NGCYEEAIM---NFCAMRRDGLMSSNFSL-----ISTLSSCASLGWIMLGQQIHGEGLKL 386
            N   + A++   +F     +    +N  L     +S LS+C+ +    + + +HG  +K 
Sbjct: 1221 NEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKK 1280

Query: 387  GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
            G D  + V N L+  YA  G      KVF  M E D +SWNS+I  +A S  L  EA++ 
Sbjct: 1281 GFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQS-GLSGEALEV 1339

Query: 447  YLDM-RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            +  M R  G   N VT   +L A +     + G  +H QVIK ++     +  +++  Y 
Sbjct: 1340 FHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYC 1399

Query: 506  KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
            KCG ++  +K F RM E+  + SW +M++GY  +    +A+++ + M++ G + ++ TF 
Sbjct: 1400 KCGRVEMAKKTFDRMKEKNVK-SWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFV 1458

Query: 566  TVLSACASVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
            +VL+AC+    +E G    +A   +  +E  +     +VD++ + G ++ A      M +
Sbjct: 1459 SVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKM 1518

Query: 625  R-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
            + +   W S++     H + D  L   +  KL    PD+  +  +LS
Sbjct: 1519 KPDFVVWGSLLGACRIHKNVD--LGEIAAQKLFELDPDNCGYYVLLS 1563



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 136/495 (27%), Positives = 227/495 (45%), Gaps = 60/495 (12%)

Query: 5    KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
            ++ H Q    GF  D+F+ + LI++Y + G L  A  LFDE+P RN VSW  +++GY   
Sbjct: 1162 RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQN 1221

Query: 65   GMSNEACKMFKEMVRA--------GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLK 116
              ++ A  +FK+ +             L+   + SVL AC      G   G  VH  V+K
Sbjct: 1222 EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG--VHGFVVK 1279

Query: 117  SNQTFDGL--VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISV 174
              + FDG   V N L+  Y  C +    ++++F+ +E +D ISWNS+I+VY+Q G +   
Sbjct: 1280 --KGFDGSIGVGNTLMDAYAKCGQPL-VSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEA 1336

Query: 175  FKLFSRMQRE-GFRYSLKPNEYTFGSLITA-AYSSVL-SGSYLLQQILAMVKKAGLLSDL 231
             ++F  M R  G RY    N  T  +++ A A++  L +G  +  Q++ M     L  ++
Sbjct: 1337 LEVFHGMVRHVGVRY----NAVTLSAVLLACAHAGALRAGKCIHDQVIKM----DLEYNV 1388

Query: 232  YVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL-----MEGRRK-GKEVHGYLIRS 285
             VG++++  + + G    A+K F++M +KNV S   +     M GR K   ++   ++R+
Sbjct: 1389 CVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRA 1448

Query: 286  GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEE 340
            G+         ++   +  G +++    F  M  K  +      +  M+    + GC  E
Sbjct: 1449 GVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNE 1508

Query: 341  AIMNFCAMRRDGLMSSNFSLI-STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
            A      M+    M  +F +  S L +C     + LG +I  + L   LD D      LL
Sbjct: 1509 AYNLIKRMK----MKPDFVVWGSLLGACRIHKNVDLG-EIAAQKL-FELDPDNCGYYVLL 1562

Query: 400  S-LYADAGYLSRCLKVFFLM--------PEHDQVSWNSVIGAF--ADSEALVSEAVKYY- 447
            S LYADAG  +   ++  LM        P    V     +  F   D E    E +  Y 
Sbjct: 1563 SNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYL 1622

Query: 448  ----LDMRRAGWSPN 458
                L++++ G+ PN
Sbjct: 1623 EKLTLELQKIGYVPN 1637



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 191/420 (45%), Gaps = 40/420 (9%)

Query: 97  QECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLI 156
           Q C    FK   Q+H  +++S  + D L++  LI +Y S       A  +F +I+     
Sbjct: 35  QNC--KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLY-STHGRIAYAILLFYQIQNPCTF 91

Query: 157 SWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ 216
           +WN II   +  G +     L+  M  +G    +  +++TF  +I A  ++ LS   L +
Sbjct: 92  TWNLIIRANTINGLSEQALMLYKNMVCQG----IAADKFTFPFVIKAC-TNFLSID-LGK 145

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGK 276
            +   + K G   D++V + L+  + + G+  +A K+FE+M  +NVVS   ++ G     
Sbjct: 146 VVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISG----- 200

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
                                      CG + ++R +F  +  K+ VSW  MI+G  +N 
Sbjct: 201 ------------------------LISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQ 236

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
             EEA+  F  M+ + +  + ++++S + +C  +G + LG+ IH   +K  ++  V +  
Sbjct: 237 QPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGT 296

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           AL+ +Y+  G +   ++VF  MP     +WNS+I +      L  EA+  + +M R    
Sbjct: 297 ALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLG-VHGLGQEALNLFSEMERVNVK 355

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEK 515
           P+ +TFI +L A       K G     ++ + Y +A        +   Y +   +D+  K
Sbjct: 356 PDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFK 415



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 140/299 (46%), Gaps = 40/299 (13%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H +I++ G + D  L   LI++Y   G +A A  LF ++ +  + +W  I+   
Sbjct: 41  KHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRAN 100

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           T  G+S +A  ++K MV  G   +++    V++AC          G  VH  ++K   + 
Sbjct: 101 TINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNF--LSIDLGKVVHGSLIKYGFSG 158

Query: 122 DGLVSNVLIAMYGSCLES-------------------------TDC-----ARRIFEEIE 151
           D  V N LI  Y  C  +                           C     ARRIF+EI 
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP 218

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS-SVLS 210
           +++++SW ++I+ Y +        +LF RMQ E    ++ PNEYT  SLI A     +L+
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAE----NIFPNEYTMVSLIKACTEMGILT 274

Query: 211 GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
              L + I     K  +   +Y+G+AL+  +++ G+   A ++FE M +K++ + N ++
Sbjct: 275 ---LGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMI 330



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 38/230 (16%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVY-------------------------------VRV 33
           K+ H  ++K+GF+ DVF+ N LI+ Y                               +  
Sbjct: 145 KVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISC 204

Query: 34  GDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVL 93
           GDL  A ++FDE+P +N VSW  +++GY       EA ++FK M       N Y + S++
Sbjct: 205 GDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLI 264

Query: 94  RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
           +AC E G      G  +H   +K+       +   LI MY  C    D A  +FE +  +
Sbjct: 265 KACTEMGI--LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKD-AIEVFETMPRK 321

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
            L +WNS+I+     G       LFS M+    R ++KP+  TF  ++ A
Sbjct: 322 SLPTWNSMITSLGVHGLGQEALNLFSEME----RVNVKPDAITFIGVLCA 367



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 4/126 (3%)

Query: 613  DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
            + A+ F+  +   NV+SWNS+I+  AR G   +AL  FS ++  G +P   +F   + +C
Sbjct: 1093 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 1152

Query: 673  SH-AGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
            S    LV     H ++   V+G    L   S ++D+  + G+L       +++P+  N +
Sbjct: 1153 SALCDLVSGRMSHQQAF--VFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR-NVV 1209

Query: 732  IWRTVL 737
             W +++
Sbjct: 1210 SWTSMI 1215



 Score = 46.2 bits (108), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 43/90 (47%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K+     V+L   LI++Y + G +  A ++F+ MP ++  +W  +++     G+
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRAC 96
             EA  +F EM R     +      VL AC
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCAC 368


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  464 bits (1194), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 263/718 (36%), Positives = 414/718 (57%), Gaps = 26/718 (3%)

Query: 232 YVGSALVSGFARLGNFYYARKIFEQM-IQKNVVSMNGLM------EGRRKGKEVHGYLIR 284
           Y   ++++ +A+ G++  A  ++++M +Q N V    ++      E   +GK +H  +  
Sbjct: 90  YSWGSMLTAYAQNGHYRAALDLYKRMDLQPNPVVYTTVLGACASIEALEEGKAIHSRISG 149

Query: 285 S-GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS-WNTMISGLDQNGCYEEAI 342
           + GL   V + N L+ MYAKCG+++D++ +F  M G+ SVS WN MI+   Q+G +EEAI
Sbjct: 150 TKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAI 209

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
             +  M    +  S  +  S LS+C++LG +  G++IH      G + D+S+ NALL++Y
Sbjct: 210 RLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMY 266

Query: 403 ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
           A    L    K+F  +P  D VSW+++I AFA+++ L  EA+++Y  M+  G  PN  TF
Sbjct: 267 ARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETD-LFDEAIEFYSKMQLEGVRPNYYTF 325

Query: 463 INILAAASSFSMGKLGHQVHAQVI----KYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
            ++L A +S    + G  VH Q++    K  + N T    AL+  Y   G +D+   +F 
Sbjct: 326 ASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGT----ALVDLYTSYGSLDEARSLFD 381

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASVATL 577
           ++ E RDE  W  +I GY         + L   M    +       ++ V+SACAS+   
Sbjct: 382 QI-ENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAF 440

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
               + H+      +  D V+ ++LV+MYS+ G ++ A + FD M  R+  +W ++I+GY
Sbjct: 441 ADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGY 500

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
           A+HG    AL L+ +M+L+G  P  +TF+ VL ACSHAGL ++G + F S+   Y + P 
Sbjct: 501 AKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPN 560

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
           +  +SC++DLL RAG L   EE IN MP+ PN + W ++LGA  R + +  +    AA  
Sbjct: 561 IAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGA-SRIH-KDVKRATHAAGQ 618

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           + +++P +  +YVLL+N++A  G    +A  R  M    VKK  G SW+ + D +H F  
Sbjct: 619 ITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNV 678

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL 877
           GD SHP    I+ +L+ L+ K+++AGYVP+++  L D+  + KE L+  HSEK+A+AF L
Sbjct: 679 GDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGL 738

Query: 878 TRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
              +    +RI   LR+C DCHSA KFIS I  REI++RDS+RFH F DG+CSCGDYW
Sbjct: 739 IATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 796



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 152/486 (31%), Positives = 247/486 (50%), Gaps = 15/486 (3%)

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           V +GN +V  Y KCG++  +R  F  +  K+  SW +M++   QNG Y  A+  +   +R
Sbjct: 58  VFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLY---KR 114

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGE--GLKLGLDSDVSVSNALLSLYADAGYL 408
             L  +     + L +CAS+  +  G+ IH    G K GL  DV + N+LL++YA  G L
Sbjct: 115 MDLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTK-GLKLDVILENSLLTMYAKCGSL 173

Query: 409 SRCLKVFFLMPEHDQV-SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
               ++F  M     V SWN++I A+A S     EA++ Y DM      P+  TF ++L+
Sbjct: 174 EDAKRLFERMSGRRSVSSWNAMIAAYAQS-GHFEEAIRLYEDM---DVEPSVRTFTSVLS 229

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
           A S+  +   G ++HA +       + +++NALL+ Y +C  +DD  KIF R+  RRD V
Sbjct: 230 ACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLP-RRDVV 288

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           SW++MI+ +   +L  +A+     M   G R +++TFA+VL ACASV  L  G  VH   
Sbjct: 289 SWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQI 348

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
           +    +  +V G+ALVD+Y+  G +D A   FD +  R+   W  +I GY++ GH    L
Sbjct: 349 LGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVL 408

Query: 648 TLFSQMKLDGPLP-DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
            L+ +MK    +P   + +  V+SAC+  G   +  +   S  +  G+I      + +V+
Sbjct: 409 ELYREMKNTTKVPATKIIYSCVISACASLGAFADA-RQAHSDIEADGMISDFVLATSLVN 467

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           +  R G L+   +  +KM  + ++L W T++    +       LG      L   EP   
Sbjct: 468 MYSRWGNLESARQVFDKMS-SRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSEL 526

Query: 767 VNYVLL 772
              V+L
Sbjct: 527 TFMVVL 532



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 143/576 (24%), Positives = 262/576 (45%), Gaps = 76/576 (13%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +VFL N ++  Y + G +ASA   FD +  +N  SW  +++ Y   G    A  ++K M 
Sbjct: 57  NVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM- 115

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-TFDGLVSNVLIAMYGSCL 137
                 N     +VL AC        + G  +H  +  +     D ++ N L+ MY  C 
Sbjct: 116 --DLQPNPVVYTTVLGACASI--EALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKC- 170

Query: 138 ESTDCARRIFEEIE-TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
            S + A+R+FE +   R + SWN++I+ Y+Q G      +L+  M  E       P+  T
Sbjct: 171 GSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVE-------PSVRT 223

Query: 197 FGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKI 253
           F S+++A      S   LL Q   I A++   G   DL + +AL++ +AR      A KI
Sbjct: 224 FTSVLSAC-----SNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKI 278

Query: 254 FEQMIQKNVVSMNGL---------------------MEGRRK------------------ 274
           F+++ +++VVS + +                     +EG R                   
Sbjct: 279 FQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDL 338

Query: 275 --GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
             G+ VH  ++ +G    +  G  LV++Y   G++D++RS+F  +  +D   W  +I G 
Sbjct: 339 RAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGY 398

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLIS-TLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
            + G     +  +  M+    + +   + S  +S+CASLG     +Q H +    G+ SD
Sbjct: 399 SKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISD 458

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
             ++ +L+++Y+  G L    +VF  M   D ++W ++I  +A        A+  Y +M 
Sbjct: 459 FVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYA-KHGEHGLALGLYKEME 517

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-----IKYNVANETTIENALLSCYGK 506
             G  P+ +TF+ +L A S   + + G Q+   +     +  N+A+ + I + L     +
Sbjct: 518 LEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLL----SR 573

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMI-SGYIHNEL 541
            G + D E++   M    ++V+W+S++ +  IH ++
Sbjct: 574 AGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDV 609



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 235/500 (47%), Gaps = 68/500 (13%)

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +QIH + +     ++V + N ++  Y   G ++     F  +   +  SW S++ A+A +
Sbjct: 44  RQIH-DRISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQN 102

Query: 437 EALVSEAVKYYLDM-RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANET 494
                   +  LD+ +R    PN V +  +L A +S    + G  +H+++     +  + 
Sbjct: 103 GHY-----RAALDLYKRMDLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDV 157

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM-M 553
            +EN+LL+ Y KCG ++D +++F RMS RR   SWN+MI+ Y  +    +A+ L   M +
Sbjct: 158 ILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDV 217

Query: 554 QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID 613
           +   R    TF +VLSAC+++  L++G ++HA       E D+ + +AL+ MY++C  +D
Sbjct: 218 EPSVR----TFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLD 273

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
            A++ F  +P R+V SW++MI+ +A     D+A+  +S+M+L+G  P++ TF  VL AC+
Sbjct: 274 DAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACA 333

Query: 674 -----------HAGLVDEGFK--------------HFKSMSQVYGLIPQLEQFS--CMVD 706
                      H  ++  G+K               + S+ +   L  Q+E         
Sbjct: 334 SVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTV 393

Query: 707 LLG-------RAGELDKIEEFINKMPITPNSLIWRTVLGACCR----ANCRKTELGRKAA 755
           L+G       R G L+   E  N   +    +I+  V+ AC      A+ R+     +A 
Sbjct: 394 LIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEAD 453

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
            M+ +      V    L NMY+   +W ++  AR+   +   +     +W T+       
Sbjct: 454 GMISDF-----VLATSLVNMYS---RWGNLESARQVFDKMSSRDT--LAWTTL------- 496

Query: 816 VAGDESHPEKDLIYEKLKEL 835
           +AG   H E  L     KE+
Sbjct: 497 IAGYAKHGEHGLALGLYKEM 516



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 140/554 (25%), Positives = 254/554 (45%), Gaps = 89/554 (16%)

Query: 2   KDAKLFHLQIL-KHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSV-SWACIVS 59
           ++ K  H +I    G   DV L N+L+ +Y + G L  A +LF+ M  R SV SW  +++
Sbjct: 138 EEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIA 197

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
            Y   G   EA +++++M       +     SVL AC   G      G ++H L+     
Sbjct: 198 AYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGL--LDQGRKIHALISSRGT 252

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D  + N L+ MY  C +  D A +IF+ +  RD++SW+++I+ +++        + +S
Sbjct: 253 ELDLSLQNALLTMYARC-KCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYS 311

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           +MQ EG R    PN YTF S++ A  S   + +G  +  QIL    K  L++    G+AL
Sbjct: 312 KMQLEGVR----PNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVN----GTAL 363

Query: 238 VSGFARLGNFYYARKIFEQMIQKN----VVSMNGL-MEGRRKG----------------- 275
           V  +   G+   AR +F+Q+  ++     V + G   +G R G                 
Sbjct: 364 VDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPAT 423

Query: 276 --------------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                               ++ H  +   G+     +   LVNMY++ G ++ +R VF 
Sbjct: 424 KIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFD 483

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M  +D+++W T+I+G  ++G +  A+  +  M  +G   S  + +  L +C+  G    
Sbjct: 484 KMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGL--- 540

Query: 376 GQQIHGEGLKLGLDSDVSVS------NALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNS 428
             Q  G+ L + + SD ++       + ++ L + AG LS   ++   MP E + V+W+S
Sbjct: 541 --QEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSS 598

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
           ++G           A + + D++RA  +   +T ++ +  AS      L   VHA  +  
Sbjct: 599 LLG-----------ASRIHKDVKRATHAAGQITKLDPVDPASYV----LLSNVHA--VTG 641

Query: 489 NVANETTIENALLS 502
           N+A   ++ N +++
Sbjct: 642 NLAGMASVRNTMVA 655


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  464 bits (1194), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/630 (38%), Positives = 378/630 (60%), Gaps = 12/630 (1%)

Query: 314  FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
            ++++   +  SWN++I+ L + G   EA+  F ++R+ GL+ +  S   T+ SC++L  +
Sbjct: 1972 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL 2031

Query: 374  MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
            + G+  H +    G ++D+ VS+AL+ +Y+  G L     +F  +P  + VSW S+I  +
Sbjct: 2032 VSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGY 2091

Query: 434  ADSEA------LVSEAVKYYLDMRRAGWSP-NGVTFINILAAASSFSMGKLGHQVHAQVI 486
              +E       L  + ++   ++      P + V  +++L+A S  S   +   VH  V+
Sbjct: 2092 VQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVV 2151

Query: 487  KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAM 546
            K        + N L+  Y KCG+    +K+F  M E+ D++SWNSMI+ Y  + L  +A+
Sbjct: 2152 KKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEK-DDISWNSMIAVYAQSGLSGEAL 2210

Query: 547  NLVWFMMQR-GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
             +   M++  G R +  T + VL ACA    L  G  +H   ++  LE++V +G++++DM
Sbjct: 2211 EVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDM 2270

Query: 606  YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
            Y KCGR++ A + FD M  +NV SW +M++GY  HG   +AL +F +M   G  P+++TF
Sbjct: 2271 YCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITF 2330

Query: 666  VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
            V VL+ACSHAGLV+EG+  F +M   Y + P +E + CMVDL GRAG L++    I +M 
Sbjct: 2331 VSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMK 2390

Query: 726  ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDV 785
            + P+ ++W ++LGA CR + +  +LG  AA  LFE++P N   YVLL+N+YA  G+W DV
Sbjct: 2391 MKPDFVVWGSLLGA-CRIH-KNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADV 2448

Query: 786  AKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
             + R  MK  ++ K  G S V +K  VHVF+ GD+ HP  ++IY+ L++L  +++  GYV
Sbjct: 2449 ERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYV 2508

Query: 846  PQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFI 904
            P     L D++ E KE ++  HSEK+AVAF V+       I I+KNLRVCGDCH+  K I
Sbjct: 2509 PNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLI 2568

Query: 905  SKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            SK+V R+ V+RDS RFHHF DG CSCGDYW
Sbjct: 2569 SKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 190/370 (51%), Gaps = 31/370 (8%)

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +QIH + ++ GL +D  ++  L+ LY+  G ++  + +F+ +      +WN +I A   +
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
             L  +A+  Y +M   G + +  TF  ++ A ++F    LG  VH  +IKY  + +  +
Sbjct: 104 -GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSER------------------------------RDE 526
           +N L+  Y KCG      K+F +M  R                              ++ 
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNV 222

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           VSW +MI+GYI N+   +A+ L   M       + +T  +++ AC  +  L  G  +H  
Sbjct: 223 VSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDY 282

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            ++ C+E  V +G+AL+DMYSKCG I  A   F+ MP +++ +WNSMI+    HG G +A
Sbjct: 283 AIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           L LFS+M+     PD +TF+GVL AC H   V EG  +F  M+Q YG+ P  E + CM +
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTE 402

Query: 707 LLGRAGELDK 716
           L  R+  LD+
Sbjct: 403 LYARSNNLDE 412



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 148/599 (24%), Positives = 272/599 (45%), Gaps = 89/599 (14%)

Query: 84   LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN-VLIAMYGSCLESTDC 142
            L++   GS   AC    PS       ++  V+   + FDG+  N +L  +     + ++ 
Sbjct: 1915 LDKDEKGSYPYACLSESPS-------IYVCVVNFYECFDGITYNSILFGVPSGREDHSNL 1967

Query: 143  ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
            A   ++ ++  ++ SWNS+I+  ++ GD++           E  R               
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSV-----------EALR--------------- 2001

Query: 203  AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
             A+SS+              +K GL+                      R  F   I K+ 
Sbjct: 2002 -AFSSL--------------RKLGLIP--------------------TRSSFPCTI-KSC 2025

Query: 263  VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
             ++  L+ GR   ++   +   + LF    V + L++MY+KCG + D+R++F  +  ++ 
Sbjct: 2026 SALCDLVSGRMSHQQAFVFGFETDLF----VSSALIDMYSKCGQLKDARALFDEIPLRNV 2081

Query: 323  VSWNTMISGLDQNGCYEEAIM---NFCAMRRDGLMSSNFSL-----ISTLSSCASLGWIM 374
            VSW +MI+G  QN   + A++   +F     +    +N  L     +S LS+C+ +    
Sbjct: 2082 VSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKG 2141

Query: 375  LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
            + + +HG  +K G D  + V N L+  YA  G      KVF  M E D +SWNS+I  +A
Sbjct: 2142 ITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYA 2201

Query: 435  DSEALVSEAVKYYLDM-RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE 493
             S  L  EA++ +  M R  G   N VT   +L A +     + G  +H QVIK ++   
Sbjct: 2202 QS-GLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYN 2260

Query: 494  TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM 553
              +  +++  Y KCG ++  +K F RM E+  + SW +M++GY  +    +A+++ + M+
Sbjct: 2261 VCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVK-SWTAMVAGYGMHGRAKEALDIFYKMV 2319

Query: 554  QRGQRLDHFTFATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRI 612
            + G + ++ TF +VL+AC+    +E G    +A   +  +E  +     +VD++ + G +
Sbjct: 2320 RAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCL 2379

Query: 613  DYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
            + A      M ++ +   W S++     H + D  L   +  KL    PD+  +  +LS
Sbjct: 2380 NEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVD--LGEIAAQKLFELDPDNCGYYVLLS 2436



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 231/502 (46%), Gaps = 60/502 (11%)

Query: 4    AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
             ++ H Q    GF  D+F+ + LI++Y + G L  A  LFDE+P RN VSW  +++GY  
Sbjct: 2034 GRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQ 2093

Query: 64   KGMSNEACKMFKEMVRA--------GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVL 115
               ++ A  +FK+ +             L+   + SVL AC      G   G  VH  V+
Sbjct: 2094 NEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG--VHGFVV 2151

Query: 116  KSNQTFDGL--VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTIS 173
            K  + FDG   V N L+  Y  C +    ++++F+ +E +D ISWNS+I+VY+Q G +  
Sbjct: 2152 K--KGFDGSIGVGNTLMDAYAKCGQPL-VSKKVFDWMEEKDDISWNSMIAVYAQSGLSGE 2208

Query: 174  VFKLFSRMQRE-GFRYSLKPNEYTFGSLITA-AYSSVL-SGSYLLQQILAMVKKAGLLSD 230
              ++F  M R  G RY    N  T  +++ A A++  L +G  +  Q++ M     L  +
Sbjct: 2209 ALEVFHGMVRHVGVRY----NAVTLSAVLLACAHAGALRAGKCIHDQVIKM----DLEYN 2260

Query: 231  LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL-----MEGR-RKGKEVHGYLIR 284
            + VG++++  + + G    A+K F++M +KNV S   +     M GR ++  ++   ++R
Sbjct: 2261 VCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVR 2320

Query: 285  SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYE 339
            +G+         ++   +  G +++    F  M  K  +      +  M+    + GC  
Sbjct: 2321 AGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLN 2380

Query: 340  EAIMNFCAMRRDGLMSSNFSLI-STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
            EA      M+    M  +F +  S L +C     + LG +I  + L   LD D      L
Sbjct: 2381 EAYNLIKRMK----MKPDFVVWGSLLGACRIHKNVDLG-EIAAQKL-FELDPDNCGYYVL 2434

Query: 399  LS-LYADAGYLSRCLKVFFLM--------PEHDQVSWNSVIGAF--ADSEALVSEAVKYY 447
            LS LYADAG  +   ++  LM        P    V     +  F   D E    E +  Y
Sbjct: 2435 LSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKY 2494

Query: 448  -----LDMRRAGWSPNGVTFIN 464
                 L++++ G+ PN  + ++
Sbjct: 2495 LEKLTLELQKIGYVPNMTSVLH 2516



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 195/420 (46%), Gaps = 40/420 (9%)

Query: 97  QECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLI 156
           Q C    FK   Q+H  +++S  + D L++  LI +Y S       A  +F +I+     
Sbjct: 35  QNC--KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLY-STHGRIAYAILLFYQIQNPCTF 91

Query: 157 SWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ 216
           +WN II   +  G +     L+  M  +G    +  +++TF  +I A  ++ LS   L +
Sbjct: 92  TWNLIIRANTINGLSEQALMLYKNMVCQG----IAADKFTFPFVIKAC-TNFLSID-LGK 145

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGK 276
            +   + K G   D++V + L+  + + G+  +A K+FE+M  +NVVS   ++       
Sbjct: 146 VVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVI------- 198

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
                             +GL++    CG + ++R +F  +  K+ VSW  MI+G  +N 
Sbjct: 199 ------------------SGLIS----CGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQ 236

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
             EEA+  F  M+ + +  + ++++S + +C  +G + LG+ IH   +K  ++  V +  
Sbjct: 237 QPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGT 296

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           AL+ +Y+  G +   ++VF  MP     +WNS+I +      L  EA+  + +M R    
Sbjct: 297 ALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLG-VHGLGQEALNLFSEMERVNVK 355

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEK 515
           P+ +TFI +L A       K G     ++ + Y +A        +   Y +   +D+  K
Sbjct: 356 PDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFK 415



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 140/299 (46%), Gaps = 40/299 (13%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H +I++ G + D  L   LI++Y   G +A A  LF ++ +  + +W  I+   
Sbjct: 41  KHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRAN 100

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           T  G+S +A  ++K MV  G   +++    V++AC          G  VH  ++K   + 
Sbjct: 101 TINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNF--LSIDLGKVVHGSLIKYGFSG 158

Query: 122 DGLVSNVLIAMYGSCLES-------------------------TDC-----ARRIFEEIE 151
           D  V N LI  Y  C  +                           C     ARRIF+EI 
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP 218

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS-SVLS 210
           +++++SW ++I+ Y +        +LF RMQ E    ++ PNEYT  SLI A     +L+
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAE----NIFPNEYTMVSLIKACTEMGILT 274

Query: 211 GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
              L + I     K  +   +Y+G+AL+  +++ G+   A ++FE M +K++ + N ++
Sbjct: 275 ---LGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMI 330



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 38/231 (16%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVY-------------------------------VR 32
            K+ H  ++K+GF+ DVF+ N LI+ Y                               + 
Sbjct: 144 GKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLIS 203

Query: 33  VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSV 92
            GDL  A ++FDE+P +N VSW  +++GY       EA ++FK M       N Y + S+
Sbjct: 204 CGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSL 263

Query: 93  LRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIET 152
           ++AC E G      G  +H   +K+       +   LI MY  C    D A  +FE +  
Sbjct: 264 IKACTEMGI--LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKD-AIEVFETMPR 320

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           + L +WNS+I+     G       LFS M+    R ++KP+  TF  ++ A
Sbjct: 321 KSLPTWNSMITSLGVHGLGQEALNLFSEME----RVNVKPDAITFIGVLCA 367



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 10/168 (5%)

Query: 575  ATLERGMEVHACGVRACLEFD-VVIGSALVDMYSKCGRIDY---ASRFFDLMPVRNVYSW 630
            A L     ++ C V     FD +   S L  + S  GR D+   A+ F+  +   NV+SW
Sbjct: 1926 ACLSESPSIYVCVVNFYECFDGITYNSILFGVPS--GREDHSNLATWFYKYVDKSNVHSW 1983

Query: 631  NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH-AGLVDEGFKHFKSMS 689
            NS+I+  AR G   +AL  FS ++  G +P   +F   + +CS    LV     H ++  
Sbjct: 1984 NSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAF- 2042

Query: 690  QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
             V+G    L   S ++D+  + G+L       +++P+  N + W +++
Sbjct: 2043 -VFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR-NVVSWTSMI 2088



 Score = 45.8 bits (107), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 43/90 (47%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K+     V+L   LI++Y + G +  A ++F+ MP ++  +W  +++     G+
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRAC 96
             EA  +F EM R     +      VL AC
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCAC 368


>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
 gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/695 (35%), Positives = 388/695 (55%), Gaps = 36/695 (5%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +G+   G  + + L  +      ++  + +     D+R VF     + +  W   ISG  
Sbjct: 28  RGRAARGGSLEARLATVPHERASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCA 87

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
           + G Y + +  F  M  +G  + N F L + +  CA +G +  G+++HG  L+ G+  DV
Sbjct: 88  RRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDV 147

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV------------ 440
            + NA+L +YA  G   R  +VF  M E D VSWN  IGA   S  ++            
Sbjct: 148 VLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLR 207

Query: 441 ------------------SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
                             ++A+ +   M +AG   N  T+      A    +  LG Q+H
Sbjct: 208 DTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLH 267

Query: 483 AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE--RRDEVSWNSMISGYIHNE 540
            +V+   +  +  + ++L+  Y KCG ++    +F   S   R    +W++M++GY+ N 
Sbjct: 268 GRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNG 327

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
              +A++L   M++ G   D FT  +V +ACA+V  +E+G +VH C  +   + D  + S
Sbjct: 328 REEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLAS 387

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           A+VDMY+KCG ++ A   FD    +N+  W SM+  YA HG G  A+ LF +M  +   P
Sbjct: 388 AIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTP 447

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           + +T VGVLSACSH GLV EG  +FK M + YG++P +E ++C+VDL GR+G LDK + F
Sbjct: 448 NEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNF 507

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           I +  I   +++W+T+L A CR + +  E  + A+  L ++E  +A +YV+L+N+YA+  
Sbjct: 508 IEENNINHEAIVWKTLLSA-CRLH-QHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNN 565

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
           KW D  + R +M+E +V+K+ G SW+ +K+ VH FVAGD SHP+   IY  L++L ++++
Sbjct: 566 KWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERLK 625

Query: 841 DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHS 899
           + GY  +T   + D+E E +E  + +HSEK+A+AF +++  S  P+RI KNLRVC DCH 
Sbjct: 626 EIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCEDCHE 685

Query: 900 AFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           A K+IS   GREIV+RD  RFHHF D  CSC D+W
Sbjct: 686 AIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 128/524 (24%), Positives = 240/524 (45%), Gaps = 47/524 (8%)

Query: 25  TLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAG-FL 83
           +++  +VR      A  +FDE P R +  W   +SG   +G   +  + F EM+  G   
Sbjct: 50  SVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEAT 109

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
            N + L +V+R C   G    + G +VH  +L++    D ++ N ++ MY  C +  + A
Sbjct: 110 PNAFVLAAVVRCC--AGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQ-FERA 166

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           RR+F  +  RD +SWN  I    Q GD +   +LF                       T 
Sbjct: 167 RRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRD----------------TT 210

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
           ++++++SG          + ++G  +D           + L     A  +F         
Sbjct: 211 SWNTIISG----------LMRSGHAAD---------ALSHLRRMAQAGVVFNHYTYSTAF 251

Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM--IGKD 321
            + G++     G+++HG ++ + L     V + L++MY KCG ++ + SVF     + +D
Sbjct: 252 VLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRD 311

Query: 322 -SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
            + +W+TM++G  QNG  EEA+  F  M R+G+ +  F+L S  ++CA++G +  G+Q+H
Sbjct: 312 MNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVH 371

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
           G   KL    D  +++A++ +YA  G L     +F      +   W S++ ++A S    
Sbjct: 372 GCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYA-SHGQG 430

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENA 499
             A++ +  M     +PN +T + +L+A S   +   G     Q+  +Y +       N 
Sbjct: 431 RIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNC 490

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG---YIHNE 540
           ++  YG+ G +D  +      +   + + W +++S    + HNE
Sbjct: 491 IVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNE 534



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 136/307 (44%), Gaps = 53/307 (17%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVY------------------------------- 30
           +  K  H  +L++G   DV LCN ++++Y                               
Sbjct: 129 ESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGAC 188

Query: 31  VRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
           ++ GD+  + +LFDE P R++ SW  I+SG    G + +A    + M +AG + N Y   
Sbjct: 189 IQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYS 248

Query: 91  SV-LRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC--LESTDCARRIF 147
           +  + A     P     G Q+H  VL +    D  V + L+ MY  C  LE+   A  +F
Sbjct: 249 TAFVLAGMLLLPD---LGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEA---AASVF 302

Query: 148 EEIE--TRDL-ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA 204
           +     TRD+  +W+++++ Y Q G       LF RM REG    +  + +T  S+  A 
Sbjct: 303 DHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREG----VAADRFTLTSVAAAC 358

Query: 205 YSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
            +   V  G    +Q+   V+K     D  + SA+V  +A+ GN   AR IF++   KN+
Sbjct: 359 ANVGMVEQG----RQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNI 414

Query: 263 VSMNGLM 269
                ++
Sbjct: 415 AVWTSML 421



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 42/99 (42%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H  + K  +  D  L + ++++Y + G+L  A  +FD    +N   W  ++  Y
Sbjct: 365 EQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSY 424

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G    A ++F+ M       N   L  VL AC   G
Sbjct: 425 ASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVG 463



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 3/172 (1%)

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
           S A L RG       + A L       ++++  + +  R   A   FD  P R    W  
Sbjct: 22  SAALLLRGRAARGGSLEARLATVPHERASVLRFWVRRRRFHDARGVFDERPTRTAPVWTL 81

Query: 633 MISGYARHGHGDKALTLFSQMKLDG-PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
            ISG AR G     +  F++M  +G   P+      V+  C+  G V+ G K        
Sbjct: 82  TISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESG-KRVHGWMLR 140

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
            G+   +   + ++D+  + G+ ++       M    +++ W   +GAC ++
Sbjct: 141 NGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMA-ERDAVSWNIAIGACIQS 191


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 275/844 (32%), Positives = 436/844 (51%), Gaps = 83/844 (9%)

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +  NV++  Y      +D A  +F  +  RD+ SWN+++S Y Q    ++  + F  M R
Sbjct: 72  ITHNVMLNGYVKLGRLSD-AVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHR 130

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G      PN +TF   + +     L    L  Q+L MV+K G   D  V +ALV  F R
Sbjct: 131 SG---DSSPNAFTFAYAMKSC--GALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVR 185

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
            G    A ++F ++ +  +   N ++ G                             Y K
Sbjct: 186 CGTVDLASRLFVRIKEPTIFCRNSMLVG-----------------------------YVK 216

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
              +D +  +F  M  +D VSWN M+S L Q+G   EA+     M+  G+   + +  S+
Sbjct: 217 TYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSS 276

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L++CA L  +  G+Q+H + ++     D  V++AL+ LYA  G       VF  + + + 
Sbjct: 277 LTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNN 336

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           V+W  +I  F       +E+V+ +  MR    + +      +++   S     LG Q+H+
Sbjct: 337 VAWTVLIAGFL-QHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHS 395

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER-------------------- 523
             +K        + N+L+S Y KC  +   E IF  M+E+                    
Sbjct: 396 LCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAK 455

Query: 524 ----------RDEVSWNSMISGYIHNELLPKAMNLVWFMM-QRGQRLDHFTFATVLSACA 572
                     ++ ++WN+M+  YI +      + +   M+ ++  R D  T+ T+   CA
Sbjct: 456 AREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCA 515

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
            +   + G ++    V+  L  D  + +A++ MYSKCGRI  A + FD + V+++ SWN+
Sbjct: 516 DLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNA 575

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           MI+GY++HG G +A+ +F  +   G  PD++++V VLS CSH+GLV EG  +F  M +V+
Sbjct: 576 MITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVH 635

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELG 751
            + P LE FSCMVDLLGRAG L + ++ I++MP+ P + +W  +L AC    N    EL 
Sbjct: 636 NISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGN---NELA 692

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
             AA  +FE++  ++ +Y+L+A +YA  GK +D A+ RK M++  +KK  G SW+ + + 
Sbjct: 693 ELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNK 752

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
           VHVF A D SHP+   I +KL EL +K+   GYV           P S+     +HSEK+
Sbjct: 753 VHVFKADDVSHPQVIAIRKKLDELMEKIARLGYVRTD-------SPRSE----IHHSEKL 801

Query: 872 AVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           AVAF +++  + +PI IMKNLR+CGDCH+  K IS + GRE V+RD+ RFHHFN G CSC
Sbjct: 802 AVAFGLMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGREFVIRDAVRFHHFNGGSCSC 861

Query: 931 GDYW 934
           GDYW
Sbjct: 862 GDYW 865



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 161/647 (24%), Positives = 273/647 (42%), Gaps = 120/647 (18%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           DA+   L  + H    +V   N ++N YV++G L+ A +LF  MP R+  SW  ++SGY 
Sbjct: 57  DARRLLLTDIAHP---NVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYF 113

Query: 63  HKGMSNEACKMFKEMVRAG-FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                  + + F  M R+G    N +     +++C   G       +Q+  +V K     
Sbjct: 114 QSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGER--SLALQLLGMVQKFGSQD 171

Query: 122 DGLVSNVLIAMYGSC-------------LEST-----------------DCARRIFEEIE 151
           D  V+  L+ M+  C              E T                 D A  +F+ + 
Sbjct: 172 DSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMP 231

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
            RD++SWN ++S  SQ G       +   MQ +G R  L    YT      A  SS+  G
Sbjct: 232 ERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR--LDSTTYTSSLTACARLSSLRWG 289

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             L  Q++  +       D YV SALV  +A+ G F  A+ +F  +  +N V+   L+ G
Sbjct: 290 KQLHAQVIRNLP----CIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAG 345

Query: 272 RRK-----------------------------------------GKEVHGYLIRSGLFDM 290
             +                                         G+++H   ++SG    
Sbjct: 346 FLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQA 405

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA--------- 341
           V V N L++MYAKC  +  + S+FRFM  KD VSW +MI+   Q G   +A         
Sbjct: 406 VVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMST 465

Query: 342 --IMNFCAM---------RRDGLMSSNFSL------------ISTLSSCASLGWIMLGQQ 378
             ++ + AM           DGL   N  L            ++    CA LG   LG Q
Sbjct: 466 KNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQ 525

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           I G  +K+GL  D SV+NA++++Y+  G +    KVF  +   D VSWN++I  ++    
Sbjct: 526 IIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYS-QHG 584

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIE 497
           +  +A++ + D+ + G  P+ ++++ +L+  S   + + G      + + +N++      
Sbjct: 585 MGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHF 644

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIH--NEL 541
           + ++   G+ G + + + +   M  +     W +++S   IH  NEL
Sbjct: 645 SCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNEL 691



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 124/523 (23%), Positives = 226/523 (43%), Gaps = 86/523 (16%)

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY------ADA-- 405
           M+   +    L SC + G +   + +HG  + +GL S V + N LL  Y       DA  
Sbjct: 1   MAVTQAFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARR 60

Query: 406 ------------------------GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
                                   G LS  +++F  MP  D  SWN+++  +  S+  ++
Sbjct: 61  LLLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLA 120

Query: 442 EAVKYYLDMRRAG-WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
            +++ ++ M R+G  SPN  TF   + +  +     L  Q+   V K+   +++ +  AL
Sbjct: 121 -SLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAAL 179

Query: 501 LSCYGKCGEMDDCEKIFARMSE------------------------------RRDEVSWN 530
           +  + +CG +D   ++F R+ E                               RD VSWN
Sbjct: 180 VDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWN 239

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
            M+S    +  + +A+++V  M  +G RLD  T+ + L+ACA +++L  G ++HA  +R 
Sbjct: 240 MMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN 299

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
               D  + SALV++Y+KCG    A   F+ +  RN  +W  +I+G+ +HG   +++ LF
Sbjct: 300 LPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELF 359

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
           +QM+ +    D      ++S C     +  G +   S+    G I  +   + ++ +  +
Sbjct: 360 NQMRAELMTLDQFALATLISGCCSRMDLCLG-RQLHSLCLKSGQIQAVVVSNSLISMYAK 418

Query: 711 AGELDKIE---EFINKMPITPNSLIWRTVLGACCRANCRKTELGR--KAANMLFEMEPQN 765
              L   E    F+N+  I      W +++ A        +++G   KA      M  +N
Sbjct: 419 CDNLQSAESIFRFMNEKDIVS----WTSMITA-------HSQVGNIAKAREFFDGMSTKN 467

Query: 766 AVNYVLLANMYASGGKWEDVAKARKAM-KEAEVKKEAGCSWVT 807
            + +  +   Y   G  ED  +    M  E +V+ +    WVT
Sbjct: 468 VITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPD----WVT 506



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 207/452 (45%), Gaps = 70/452 (15%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q++++    D ++ + L+ +Y + G    A  +F+ + DRN+V+W  +++G+   
Sbjct: 290 KQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQH 349

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   E+ ++F +M      L+++AL +++  C  C       G Q+H L LKS Q    +
Sbjct: 350 GCFTESVELFNQMRAELMTLDQFALATLISGC--CSRMDLCLGRQLHSLCLKSGQIQAVV 407

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM--- 181
           VSN LI+MY  C ++   A  IF  +  +D++SW S+I+ +SQ G+     + F  M   
Sbjct: 408 VSNSLISMYAKC-DNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTK 466

Query: 182 -----------------QREGFRY--------SLKPNEYTFGSLITAAYSSVLSGSYLLQ 216
                            + +G R          ++P+  T+ +L        L  + L  
Sbjct: 467 NVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCAD--LGANKLGD 524

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---- 272
           QI+    K GL+ D  V +A+++ +++ G    ARK+F+ +  K++VS N ++ G     
Sbjct: 525 QIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHG 584

Query: 273 --RKGKEVHGYLIRSG----LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
             ++  E+   +++ G        VAV +G     +  G + + +S F  M    ++S  
Sbjct: 585 MGKQAIEIFDDILKRGAKPDYISYVAVLSGC----SHSGLVQEGKSYFDMMKRVHNIS-- 638

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL---SSCASLGWIMLGQQIHG-- 381
               GL+   C  +       + R G ++    LI  +    +    G ++   +IHG  
Sbjct: 639 ---PGLEHFSCMVD------LLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNN 689

Query: 382 EGLKLG------LDSDVSVSNALLS-LYADAG 406
           E  +L       LDS  S S  L++ +YADAG
Sbjct: 690 ELAELAAKHVFELDSPDSGSYMLMAKIYADAG 721


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 241/668 (36%), Positives = 383/668 (57%), Gaps = 37/668 (5%)

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
           +Y+    + DS  +F  +    +++W ++I     +G   +++ +F  M   GL   +  
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR--------- 410
             S L SCA L  + LG+ +HG  +++GLD D+   NAL+++Y+   +L           
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 411 -----------------------CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
                                    K+F +MPE D VSWN++I   A +  L  E ++  
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARN-GLYEETLRMI 227

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
            +M  A   P+  T  ++L   +       G ++H   I+  +  +  + ++L+  Y KC
Sbjct: 228 REMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKC 287

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
             + D  ++F  ++ER D +SWNS+I+G + N L  + +     M+    +   ++F+++
Sbjct: 288 TRVADSCRVFTLLTER-DGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSI 346

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           + ACA + TL  G ++H    R   + ++ I S+LVDMY+KCG I  A + FD M +R++
Sbjct: 347 MPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDM 406

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            SW +MI G A HG    A+ LF QM+ +G  P+HV F+ VL+ACSH GLVDE +K+F S
Sbjct: 407 VSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNS 466

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           M++ +G+ P +E ++ + DLLGRAG L++  +FI  M I P   IW T+L A CR +   
Sbjct: 467 MTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSA-CRVH-XN 524

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
            ++  K AN + E++P N   Y+LLAN+Y++  +W++ AK R +M+   ++K   CSW+ 
Sbjct: 525 IDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIE 584

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
           +K+ V+ F+AGDESHP  + I E ++ L + M   GYVP T     D+E E K+ LV  H
Sbjct: 585 VKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSH 644

Query: 868 SEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SE++A+ F ++   + + IR+ KNLRVC DCH+A KFISKIVGREIV+RD++RFHHF +G
Sbjct: 645 SERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNG 704

Query: 927 KCSCGDYW 934
            CSCGDYW
Sbjct: 705 TCSCGDYW 712



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 184/397 (46%), Gaps = 37/397 (9%)

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
            QQ+H + LK    S +   + LLS+Y+    L   L++F  +     ++W SVI  +  
Sbjct: 25  AQQLHAQVLKFQASS-LCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYT- 82

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           S  L  +++  ++ M  +G  P+   F ++L + +      LG  +H  +I+  +  +  
Sbjct: 83  SHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLY 142

Query: 496 IENALLSCYGK-------------CGEM-------------------DDCEKIFARMSER 523
             NAL++ Y K              GE+                   D   KIF  M E 
Sbjct: 143 TGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPE- 201

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
           +D VSWN++I+G   N L  + + ++  M     + D FT ++VL   A    + RG E+
Sbjct: 202 KDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEI 261

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           H C +R  L+ D+ + S+L+DMY+KC R+  + R F L+  R+  SWNS+I+G  ++G  
Sbjct: 262 HGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLF 321

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC 703
           D+ L  F QM +    P   +F  ++ AC+H   +  G K         G    +   S 
Sbjct: 322 DEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLG-KQLHGYITRNGFDENIFIASS 380

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC 740
           +VD+  + G +   ++  ++M +  + + W  ++  C
Sbjct: 381 LVDMYAKCGNIRTAKQIFDRMRLR-DMVSWTAMIMGC 416



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 174/399 (43%), Gaps = 80/399 (20%)

Query: 145 RIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA 204
           R+F  I     ++W S+I  Y+  G        F  M   G    L P+   F S++ + 
Sbjct: 61  RLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASG----LYPDHNVFPSVLKSC 116

Query: 205 YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV-----------SGFARLG-------- 245
             ++L    L + +   + + GL  DLY G+AL+           SG  RLG        
Sbjct: 117 --ALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEM 174

Query: 246 -------------NFYYARKIFEQMIQKNVVSMNGLMEGR-------------------- 272
                        +    RKIFE M +K++VS N ++ G                     
Sbjct: 175 TERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGAN 234

Query: 273 ---------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
                                 +GKE+HG  IR GL   + V + L++MYAKC  + DS 
Sbjct: 235 LKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSC 294

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
            VF  +  +D +SWN++I+G  QNG ++E +  F  M    +   ++S  S + +CA L 
Sbjct: 295 RVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLT 354

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
            + LG+Q+HG   + G D ++ ++++L+ +YA  G +    ++F  M   D VSW ++I 
Sbjct: 355 TLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIM 414

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
             A       +A++ +  M   G  PN V F+ +L A S
Sbjct: 415 GCA-LHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACS 452



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 210/473 (44%), Gaps = 88/473 (18%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H Q+LK   A  +   + L+++Y  +  L  + +LF+ +    +++W  ++  YT 
Sbjct: 25  AQQLHAQVLKFQ-ASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTS 83

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+ +++   F  M+ +G   +     SVL++C          G  +H  +++    FD 
Sbjct: 84  HGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALL--MDLNLGESLHGYIIRVGLDFDL 141

Query: 124 LVSNVLIAMYGSC--LE-----------------------------STDCARRIFEEIET 152
              N L+ MY     LE                             S D  R+IFE +  
Sbjct: 142 YTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPE 201

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV-LSG 211
           +DL+SWN+II+  ++ G    +++   RM RE    +LKP+ +T  S++     +V +S 
Sbjct: 202 KDLVSWNTIIAGNARNG----LYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISR 257

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM-- 269
               ++I     + GL +D+YV S+L+  +A+      + ++F  + +++ +S N ++  
Sbjct: 258 G---KEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAG 314

Query: 270 --------EGRR-------------------------------KGKEVHGYLIRSGLFDM 290
                   EG R                                GK++HGY+ R+G  + 
Sbjct: 315 CVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDEN 374

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           + + + LV+MYAKCG I  ++ +F  M  +D VSW  MI G   +G   +AI  F  M  
Sbjct: 375 IFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMET 434

Query: 351 DGLMSSNFSLISTLSSCASLG-----WIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           +G+  ++ + ++ L++C+  G     W          G+  G++   +VS+ L
Sbjct: 435 EGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLL 487


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 247/664 (37%), Positives = 386/664 (58%), Gaps = 8/664 (1%)

Query: 275 GKEVHGYLI--RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           GK +H +LI       D +   N L+N+YAKC  I  +R +F  M  ++ VSW  +++G 
Sbjct: 44  GKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGY 103

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL-SSCASLGWIMLGQQIHGEGLKLGLDSD 391
             NG   E +  F  M     M  N  + +T+ SSC+  G ++ G Q HG  LK GL   
Sbjct: 104 FHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFH 163

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
             V NAL+ +Y+    +   + V++ +P  D  S+N +I    ++    SEA++    M 
Sbjct: 164 QYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLEN-GYPSEALEVLDRMV 222

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
                 + VT++      S     +LG QVH ++ +     ++ + +A++  YGKCG + 
Sbjct: 223 DECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNIL 282

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
           +  K+F R+ + ++ VSW ++++ Y  N    +A+N    M   G   + +TFA +L++C
Sbjct: 283 NARKVFNRL-QTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSC 341

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           A ++ L  G  +H    ++  E  +++G+AL++MYSK G I+ A + F  M  R+  +W+
Sbjct: 342 AGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWS 401

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           +MI G + HG G +AL +F +M      P +VTFVGVLSAC+H G V EGF +   + + 
Sbjct: 402 AMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQ 461

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
            G+ P +E ++C+V LL +AG LD+ E F+   P+  + + WRT+L AC     +   LG
Sbjct: 462 TGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVH--QNYGLG 519

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
           +K A ++ +M+P +   Y+LL+NMYA   +W+ V K RK M+E  VKKE G SW+ +++ 
Sbjct: 520 KKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNS 579

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
           +HVFV+  ++HPE + IYEK++EL   +R  GYVP       D+E E K + VSYHSEK+
Sbjct: 580 IHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKL 639

Query: 872 AVAFVLTRN-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           A+A+ L +  S  PIR++KNLR+C DCHSA K ISK+  R I++RD+NRFH F DG CSC
Sbjct: 640 AIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGGCSC 699

Query: 931 GDYW 934
            DYW
Sbjct: 700 ADYW 703



 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 233/484 (48%), Gaps = 58/484 (11%)

Query: 104 FKFGMQVHCLVLKSNQ-TFDGLVS-NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSI 161
            KFG  +H  ++ +NQ T D +V  N LI +Y  C +    AR +F+ +  R+++SW ++
Sbjct: 41  LKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKC-DQIMVARILFDGMRKRNVVSWGAL 99

Query: 162 ISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQIL 219
           ++ Y   G  + V +LF  M    +   ++PNEY F ++I++   S  V+ G     Q  
Sbjct: 100 MAGYFHNGLVLEVLRLFKTMISVDY---MRPNEYIFATIISSCSDSGQVVEG----WQCH 152

Query: 220 AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS----MNGLMEG---- 271
               K+GL+   YV +AL+  ++R  +   A  ++ ++   +V S    +NGL+E     
Sbjct: 153 GYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPS 212

Query: 272 ---------------------------------RRKGKEVHGYLIRSGLFDMVAVGNGLV 298
                                             R G +VH  + R+G      V + ++
Sbjct: 213 EALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAII 272

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
           +MY KCG I ++R VF  +  K+ VSW  +++   QNGC+EEA+  F  M  DGL+ + +
Sbjct: 273 DMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEY 332

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           +    L+SCA +  +  G+ +H    K G +  + V NAL+++Y+ +G +    KVF  M
Sbjct: 333 TFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEM 392

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
              D ++W+++I   +    L  EA+  + +M  A   P+ VTF+ +L+A +     + G
Sbjct: 393 ICRDSITWSAMICGLSH-HGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEG 451

Query: 479 HQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG- 535
                Q++K     E  +E+   ++    K G +D+ E        + D V+W +++S  
Sbjct: 452 FYYLNQLMK-QTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSAC 510

Query: 536 YIHN 539
           ++H 
Sbjct: 511 HVHQ 514



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 203/469 (43%), Gaps = 53/469 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           HL I       ++   N+LIN+Y +   +  A  LFD M  RN VSW  +++GY H G+ 
Sbjct: 50  HLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLV 109

Query: 68  NEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            E  ++FK M+   ++  N Y   +++ +C + G      G Q H   LKS   F   V 
Sbjct: 110 LEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQ--VVEGWQCHGYALKSGLVFHQYVK 167

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI MY S       A  ++ E+   D+ S+N II+   + G      ++  RM  E  
Sbjct: 168 NALICMY-SRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECI 226

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
            +        FG        S L    L  Q+   + + G   D +V SA++  + + GN
Sbjct: 227 VWDNVTYVTAFG------LCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGN 280

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------------- 274
              ARK+F ++  KNVVS   ++    +                                
Sbjct: 281 ILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNS 340

Query: 275 ---------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    GK +H  + +SG  D + VGN L+NMY+K G+I+ +  VF  MI +DS++W
Sbjct: 341 CAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITW 400

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           + MI GL  +G   EA++ F  M          + +  LS+CA LG +  G     + +K
Sbjct: 401 SAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMK 460

Query: 386 -LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
             G++  V     ++ L   AG L          P + D V+W +++ A
Sbjct: 461 QTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSA 509



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 147/328 (44%), Gaps = 23/328 (7%)

Query: 2   KDAKL---FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIV 58
           KD +L    H ++ + G  YD F+ + +I++Y + G++ +A K+F+ +  +N VSW  I+
Sbjct: 244 KDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAIL 303

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
           + Y+  G   EA   F EM   G L N Y    +L +C   G S    G  +H  + KS 
Sbjct: 304 AAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSC--AGISALGHGKLLHTRIKKSG 361

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
                +V N LI MY     S + A ++F E+  RD I+W+++I   S  G       +F
Sbjct: 362 FEDHIIVGNALINMYSKS-GSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVF 420

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
             M          P+  TF  +++A     SV  G Y L Q++   K+ G+   +   + 
Sbjct: 421 QEM----LAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLM---KQTGIEPGVEHYTC 473

Query: 237 LVSGFARLGNFYYARKIFEQM-IQKNVVSMNGLM------EGRRKGKEVHGYLIRSGLFD 289
           +V    + G    A    +   ++ +VV+   L+      +    GK+V   +++    D
Sbjct: 474 IVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGD 533

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
            V     L NMYAK    D    + + M
Sbjct: 534 -VGTYILLSNMYAKAKRWDGVVKIRKLM 560



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 5/131 (3%)

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGV--RACLEFDVVIGSALVDMYSKCGRID 613
           G  L+H     +L   A    L+ G  +HA  +      + ++V  ++L+++Y+KC +I 
Sbjct: 22  GHPLEHTI--QLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIM 79

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM-KLDGPLPDHVTFVGVLSAC 672
            A   FD M  RNV SW ++++GY  +G   + L LF  M  +D   P+   F  ++S+C
Sbjct: 80  VARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSC 139

Query: 673 SHAGLVDEGFK 683
           S +G V EG++
Sbjct: 140 SDSGQVVEGWQ 150


>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 276/783 (35%), Positives = 420/783 (53%), Gaps = 90/783 (11%)

Query: 203 AAYSSVLSGSYLLQQIL--AMVKKAGLL------SDLYVGSALVSGFARLGNFYYARKIF 254
           A YSS L  + LL ++     V +A  L       D Y  + ++S +A LGN   ARK+F
Sbjct: 32  AHYSSNLDSNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLF 91

Query: 255 EQMIQKNVVSMNGLM----------EGRRK------------------------------ 274
            +    N ++ + L+          EG R+                              
Sbjct: 92  NETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLH 151

Query: 275 -GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG-KDSVSWNTMISGL 332
            GK +H Y I+  L   + V  GLV+MY+KC  + ++  +F  +   K+ V W  M++G 
Sbjct: 152 TGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGY 211

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            QNG   +AI  F  MR  G+ S++F+  S L++C S+     G+Q+HG  +  G   +V
Sbjct: 212 AQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNV 271

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V +AL+ +YA  G L+    +   M   D V WNS+I     +   + EA+  +  M  
Sbjct: 272 YVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCV-THGYMEEALVLFHKMHN 330

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
                +  T+ ++L + +S    K+G  VH+  IK       T+ NAL+  Y K G +  
Sbjct: 331 RDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSC 390

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
              +F ++ ++ D +SW S+++GY+HN    KA+ L   M      LD F  A V SACA
Sbjct: 391 ALDVFNKILDK-DVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACA 449

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
            +  +E G +VHA  +++     +   ++L+ MY+KCG ++ A R  D M  RNV SW +
Sbjct: 450 ELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTA 509

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           +I GYA++G                                   LV+ G  +F+SM +VY
Sbjct: 510 IIVGYAQNG-----------------------------------LVETGQSYFESMEKVY 534

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
           G+ P  ++++CM+DLLGRAG++++ E  +N+M + P++ IW+++L AC R +    ELG 
Sbjct: 535 GIKPASDRYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSAC-RVH-GNLELGE 592

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
           +A   L ++EP N++ YVLL+NM++  G+WED A  R+AMK   + +E G SW+ MK  V
Sbjct: 593 RAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGIXQEPGYSWIEMKSQV 652

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
           H F++ D SHP    IY K+ E+   +++AG+VP   FAL D++ E+KE  ++YHSEK+A
Sbjct: 653 HTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLA 712

Query: 873 VAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
           VAF +LT     PIRI KNLRVCGDCHSA K+IS I  R I+LRD N FHHF +GKCSCG
Sbjct: 713 VAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIFKRHIILRDLNCFHHFIEGKCSCG 772

Query: 932 DYW 934
           D+W
Sbjct: 773 DFW 775



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 144/558 (25%), Positives = 248/558 (44%), Gaps = 84/558 (15%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D +  N +I+ Y  +G+L  A KLF+E P  NS++W+ +VSGY   G   E  + F +M 
Sbjct: 67  DKYTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMW 126

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             G   ++Y LGSVLRAC     S    G  +HC  +K     +  V+  L+ MY  C  
Sbjct: 127 SDGQKPSQYTLGSVLRACSTL--SLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKC 184

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             +     F   + ++ + W ++++ Y+Q G+++   + F  M+ +G    ++ N +TF 
Sbjct: 185 LLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQG----MESNHFTFP 240

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           S++TA  S  +S     +Q+   +  +G   ++YV SALV  +A+ G+   AR I + M 
Sbjct: 241 SILTACTS--ISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTME 298

Query: 259 QKNVVSMNGLMEG-----------------------------------------RRKGKE 277
             +VV  N ++ G                                          + G+ 
Sbjct: 299 IDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGES 358

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VH   I++G      V N LV+MYAK G +  +  VF  ++ KD +SW ++++G   NG 
Sbjct: 359 VHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGF 418

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
           +E+A+  FC MR   +    F +    S+CA L  I  G+Q+H   +K    S +S  N+
Sbjct: 419 HEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENS 478

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+++YA  G L   ++V   M   + +SW ++I  +A +  LV     Y+  M +     
Sbjct: 479 LITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQN-GLVETGQSYFESMEKV---- 533

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
                                         Y +   +     ++   G+ G++++ E + 
Sbjct: 534 ------------------------------YGIKPASDRYACMIDLLGRAGKINEAEHLL 563

Query: 518 ARMSERRDEVSWNSMISG 535
            RM    D   W S++S 
Sbjct: 564 NRMDVEPDATIWKSLLSA 581



 Score =  186 bits (472), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 157/616 (25%), Positives = 270/616 (43%), Gaps = 123/616 (19%)

Query: 130 IAMYGSCLEST------------DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
           IA Y S L+S             D AR++F+++  RD  +WN +IS Y+  G+ +   KL
Sbjct: 31  IAHYSSNLDSNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKL 90

Query: 178 FSRM--------------------QREGFRY-------SLKPNEYTFGSLITAAYSSVLS 210
           F+                      + EG R          KP++YT GS++ A   S LS
Sbjct: 91  FNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRAC--STLS 148

Query: 211 GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI-QKNVVSMNGLM 269
             +  + I     K  L ++++V + LV  +++      A  +F  +  +KN V    ++
Sbjct: 149 LLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAML 208

Query: 270 EGRRK-----------------------------------------GKEVHGYLIRSGLF 288
            G  +                                         G++VHG +I SG  
Sbjct: 209 TGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFG 268

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
             V V + LV+MYAKCG +  +R +   M   D V WN+MI G   +G  EEA++ F  M
Sbjct: 269 PNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKM 328

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
               +   +F+  S L S AS   + +G+ +H   +K G D+  +VSNAL+ +YA  G L
Sbjct: 329 HNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNL 388

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
           S  L VF  + + D +SW S++  +  +     +A++ + DMR A    +      + +A
Sbjct: 389 SCALDVFNKILDKDVISWTSLVTGYVHN-GFHEKALQLFCDMRTARVDLDQFVVACVFSA 447

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
            +  ++ + G QVHA  IK +  +  + EN+L++ Y KCG ++D  ++   M E R+ +S
Sbjct: 448 CAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSM-ETRNVIS 506

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           W ++I GY  N L+           + GQ        +   +   V  ++   + +AC  
Sbjct: 507 WTAIIVGYAQNGLV-----------ETGQ--------SYFESMEKVYGIKPASDRYAC-- 545

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGH---GD 644
                        ++D+  + G+I+ A    + M V  +   W S++S    HG+   G+
Sbjct: 546 -------------MIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGE 592

Query: 645 KALTLFSQMKLDGPLP 660
           +A     +++    LP
Sbjct: 593 RAGKNLIKLEPSNSLP 608



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 103/194 (53%), Gaps = 6/194 (3%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   +K GF     + N L+++Y + G+L+ A  +F+++ D++ +SW  +V+GY H G  
Sbjct: 360 HSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFH 419

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            +A ++F +M  A   L+++ +  V  AC E   +  +FG QVH   +KS+        N
Sbjct: 420 EKALQLFCDMRTARVDLDQFVVACVFSACAEL--TVIEFGRQVHANFIKSSAGSLLSAEN 477

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI MY  C    D A R+ + +ETR++ISW +II  Y+Q G   +    F  M++    
Sbjct: 478 SLITMYAKCGCLED-AIRVXDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEKV--- 533

Query: 188 YSLKPNEYTFGSLI 201
           Y +KP    +  +I
Sbjct: 534 YGIKPASDRYACMI 547



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 185/427 (43%), Gaps = 59/427 (13%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  I+  GF  +V++ + L+++Y + GDLASA  + D M   + V W  ++ G    G  
Sbjct: 259 HGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYM 318

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA  +F +M      ++ +   SVL++   C     K G  VH L +K+       VSN
Sbjct: 319 EEALVLFHKMHNRDIRIDDFTYPSVLKSLASC--KNLKIGESVHSLTIKTGFDACKTVSN 376

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY     +  CA  +F +I  +D+ISW S+++ Y   G      +LF  M+    R
Sbjct: 377 ALVDMYAK-QGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTA--R 433

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             L  +++    + +A   + L+     +Q+ A   K+   S L   ++L++ +A+ G  
Sbjct: 434 VDL--DQFVVACVFSAC--AELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCL 489

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
             A ++ + M  +NV+S   ++ G                             YA+ G +
Sbjct: 490 EDAIRVXDSMETRNVISWTAIIVG-----------------------------YAQNGLV 520

Query: 308 DDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSL 360
           +  +S F  M     I   S  +  MI  L + G   EA  ++N   +  D  +      
Sbjct: 521 ETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWK---- 576

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-------LYADAGYLSRCLK 413
            S LS+C   G + LG++  G+ L + L+   S+   LLS        + DA ++ R +K
Sbjct: 577 -SLLSACRVHGNLELGERA-GKNL-IKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMK 633

Query: 414 VFFLMPE 420
              +  E
Sbjct: 634 TMGIXQE 640


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 260/717 (36%), Positives = 412/717 (57%), Gaps = 25/717 (3%)

Query: 232 YVGSALVSGFARLGNFYYARKIFEQM-IQKNVVSMNGLM------EGRRKGKEVHGYLIR 284
           Y   ++++ +A+ G++  A  ++++M +Q N V    ++      +   +GK +H  +  
Sbjct: 90  YSWGSMLTAYAQNGHYRAALDLYKRMDLQPNPVVYTTVLGACASIKALEEGKAIHSRISG 149

Query: 285 S-GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
           + GL   V + N L+ MYAKCG+++D++ +F  M G+   SWN MI+   Q+G +EEAI 
Sbjct: 150 TKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIR 209

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            +  M    +  S  +  S LS+C++LG +  G++IH      G + D+S+ NALL++YA
Sbjct: 210 LYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYA 266

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
               L    K+F  +P  D VSW+++I AFA+++ L  EA+++Y  M+  G  PN  TF 
Sbjct: 267 RCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETD-LFDEAIEFYSKMQLEGVRPNYYTFA 325

Query: 464 NILAAASSFSMGKLGHQVHAQVI----KYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           ++L A +S    + G  VH Q++    K  + N T    AL+  Y   G +D+   +F +
Sbjct: 326 SVLLACASVGDLRAGRAVHDQILGNGYKITLVNGT----ALVDLYTSYGSLDEARSLFDQ 381

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASVATLE 578
           + E RDE  W  +I GY         + L   M    +       ++ V+SACAS+    
Sbjct: 382 I-ENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFA 440

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
              + H+      +  D V+ ++LV+MYS+ G ++ A + FD M  R+  +W ++I+GYA
Sbjct: 441 DARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYA 500

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
           +HG    AL L+ +M+L+G  P  +TF+ VL ACSHAGL ++G + F S+   Y + P +
Sbjct: 501 KHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNI 560

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
             +SC++DLL RAG L   EE IN MP+ PN + W ++LGA  R + +  +    AA  +
Sbjct: 561 AHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGA-SRIH-KDVKRATHAAGQI 618

Query: 759 FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
            +++P +  +YVLL+N++A  G    +A  R  M    VKK  G SW+ + D +H F  G
Sbjct: 619 TKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVG 678

Query: 819 DESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLT 878
           D SHP    I+ +L+ L+ K+++AGYVP+++  L D+  + KE L+  HSEK+A+AF L 
Sbjct: 679 DNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLI 738

Query: 879 RNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             +    +RI   LR+C DCHSA KFIS I  REI++RDS+RFH F DG+CSCGDYW
Sbjct: 739 ATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 795



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 151/485 (31%), Positives = 247/485 (50%), Gaps = 14/485 (2%)

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           V +GN +V  Y KCG++  +R+ F  +  K+  SW +M++   QNG Y  A+  +   +R
Sbjct: 58  VFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLY---KR 114

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGE--GLKLGLDSDVSVSNALLSLYADAGYL 408
             L  +     + L +CAS+  +  G+ IH    G K GL  DV + N+LL++YA  G L
Sbjct: 115 MDLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTK-GLKLDVILENSLLTMYAKCGSL 173

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
               ++F  M      SWN++I A+A S     EA++ Y DM      P+  TF ++L+A
Sbjct: 174 EDAKRLFERMSGRSVSSWNAMIAAYAQS-GHFEEAIRLYEDM---DVEPSVRTFTSVLSA 229

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
            S+  +   G ++HA +       + +++NALL+ Y +C  +DD  KIF R+  RRD VS
Sbjct: 230 CSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLP-RRDVVS 288

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           W++MI+ +   +L  +A+     M   G R +++TFA+VL ACASV  L  G  VH   +
Sbjct: 289 WSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQIL 348

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
               +  +V G+ALVD+Y+  G +D A   FD +  R+   W  +I GY++ GH    L 
Sbjct: 349 GNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLE 408

Query: 649 LFSQMKLDGPLP-DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDL 707
           L+ +MK    +P   + +  V+SAC+  G   +  +   S  +  G+I      + +V++
Sbjct: 409 LYREMKNTTKVPATKIIYSCVISACASLGAFADA-RQAHSDIEADGMISDFVLATSLVNM 467

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAV 767
             R G L+   +  +KM  + ++L W T++    +       LG      L   EP    
Sbjct: 468 YSRWGNLESARQVFDKMS-SRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELT 526

Query: 768 NYVLL 772
             V+L
Sbjct: 527 FMVVL 531



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 143/575 (24%), Positives = 262/575 (45%), Gaps = 75/575 (13%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +VFL N ++  Y + G +ASA   FD +  +N  SW  +++ Y   G    A  ++K M 
Sbjct: 57  NVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM- 115

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-TFDGLVSNVLIAMYGSCL 137
                 N     +VL AC        + G  +H  +  +     D ++ N L+ MY  C 
Sbjct: 116 --DLQPNPVVYTTVLGACASI--KALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKC- 170

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
            S + A+R+FE +  R + SWN++I+ Y+Q G      +L+  M  E       P+  TF
Sbjct: 171 GSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVE-------PSVRTF 223

Query: 198 GSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
            S+++A      S   LL Q   I A++   G   DL + +AL++ +AR      A KIF
Sbjct: 224 TSVLSAC-----SNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIF 278

Query: 255 EQMIQKNVVSMNGL---------------------MEGRRK------------------- 274
           +++ +++VVS + +                     +EG R                    
Sbjct: 279 QRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLR 338

Query: 275 -GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
            G+ VH  ++ +G    +  G  LV++Y   G++D++RS+F  +  +D   W  +I G  
Sbjct: 339 AGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYS 398

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLIS-TLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
           + G     +  +  M+    + +   + S  +S+CASLG     +Q H +    G+ SD 
Sbjct: 399 KQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDF 458

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            ++ +L+++Y+  G L    +VF  M   D ++W ++I  +A        A+  Y +M  
Sbjct: 459 VLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYA-KHGEHGLALGLYKEMEL 517

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-----IKYNVANETTIENALLSCYGKC 507
            G  P+ +TF+ +L A S   + + G Q+   +     +  N+A+ + I + L     + 
Sbjct: 518 EGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLL----SRA 573

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMI-SGYIHNEL 541
           G + D E++   M    ++V+W+S++ +  IH ++
Sbjct: 574 GRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDV 608



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 138/553 (24%), Positives = 253/553 (45%), Gaps = 88/553 (15%)

Query: 2   KDAKLFHLQIL-KHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           ++ K  H +I    G   DV L N+L+ +Y + G L  A +LF+ M  R+  SW  +++ 
Sbjct: 138 EEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAA 197

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y   G   EA +++++M       +     SVL AC   G      G ++H L+      
Sbjct: 198 YAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGL--LDQGRKIHALISSRGTE 252

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D  + N L+ MY  C +  D A +IF+ +  RD++SW+++I+ +++        + +S+
Sbjct: 253 LDLSLQNALLTMYARC-KCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSK 311

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           MQ EG R    PN YTF S++ A  S   + +G  +  QIL    K  L++    G+ALV
Sbjct: 312 MQLEGVR----PNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVN----GTALV 363

Query: 239 SGFARLGNFYYARKIFEQMIQKN----VVSMNGL-MEGRRKG------------------ 275
             +   G+   AR +F+Q+  ++     V + G   +G R G                  
Sbjct: 364 DLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATK 423

Query: 276 -------------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                              ++ H  +   G+     +   LVNMY++ G ++ +R VF  
Sbjct: 424 IIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDK 483

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M  +D+++W T+I+G  ++G +  A+  +  M  +G   S  + +  L +C+  G     
Sbjct: 484 MSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGL---- 539

Query: 377 QQIHGEGLKLGLDSDVSVS------NALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSV 429
            Q  G+ L + + SD ++       + ++ L + AG LS   ++   MP E + V+W+S+
Sbjct: 540 -QEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSL 598

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           +G           A + + D++RA  +   +T ++ +  AS      L   VHA  +  N
Sbjct: 599 LG-----------ASRIHKDVKRATHAAGQITKLDPVDPASYV----LLSNVHA--VTGN 641

Query: 490 VANETTIENALLS 502
           +A   ++ N +++
Sbjct: 642 LAGMASVRNTMVA 654



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 234/500 (46%), Gaps = 69/500 (13%)

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +QIH + +     ++V + N ++  Y   G ++     F  +   +  SW S++ A+A +
Sbjct: 44  RQIH-DRISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQN 102

Query: 437 EALVSEAVKYYLDM-RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANET 494
                   +  LD+ +R    PN V +  +L A +S    + G  +H+++     +  + 
Sbjct: 103 GHY-----RAALDLYKRMDLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDV 157

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM-M 553
            +EN+LL+ Y KCG ++D +++F RMS  R   SWN+MI+ Y  +    +A+ L   M +
Sbjct: 158 ILENSLLTMYAKCGSLEDAKRLFERMSG-RSVSSWNAMIAAYAQSGHFEEAIRLYEDMDV 216

Query: 554 QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID 613
           +   R    TF +VLSAC+++  L++G ++HA       E D+ + +AL+ MY++C  +D
Sbjct: 217 EPSVR----TFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLD 272

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
            A++ F  +P R+V SW++MI+ +A     D+A+  +S+M+L+G  P++ TF  VL AC+
Sbjct: 273 DAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACA 332

Query: 674 -----------HAGLVDEGFK--------------HFKSMSQVYGLIPQLEQFS--CMVD 706
                      H  ++  G+K               + S+ +   L  Q+E         
Sbjct: 333 SVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTV 392

Query: 707 LLG-------RAGELDKIEEFINKMPITPNSLIWRTVLGACCR----ANCRKTELGRKAA 755
           L+G       R G L+   E  N   +    +I+  V+ AC      A+ R+     +A 
Sbjct: 393 LIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEAD 452

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
            M+ +      V    L NMY+   +W ++  AR+   +   +     +W T+       
Sbjct: 453 GMISDF-----VLATSLVNMYS---RWGNLESARQVFDKMSSRDT--LAWTTL------- 495

Query: 816 VAGDESHPEKDLIYEKLKEL 835
           +AG   H E  L     KE+
Sbjct: 496 IAGYAKHGEHGLALGLYKEM 515


>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 273/789 (34%), Positives = 444/789 (56%), Gaps = 55/789 (6%)

Query: 108 MQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQ 167
           +  H +VL  +Q  D  + N L+  Y      +D A+++F+ +  R+L++W+S++S+Y+Q
Sbjct: 73  IHAHIVVLGFHQ-HDVFLVNTLLHAYSKMNLQSD-AQKLFDTMPHRNLVTWSSMVSMYTQ 130

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
            G ++    LF R  R     S KPNEY   S++ A   + L       Q+   V K G 
Sbjct: 131 HGYSVEALLLFCRFMRSC---SEKPNEYILASVVRAC--TQLGNLSQALQLHGFVVKGGF 185

Query: 228 LSDLYVGS-------------------------------ALVSGFARLGNFYYARKIFEQ 256
           + D+YVG+                               A+++G+A+LG    + K+F Q
Sbjct: 186 VQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQ 245

Query: 257 M----------IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCG 305
           M          +  +V+S   ++E    GK++HGY++R G FDM V+V NG+++ Y KC 
Sbjct: 246 MREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRG-FDMDVSVVNGIIDFYLKCH 304

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            +   R +F  ++ KD VSW TMI+G  QN  + +A+  F  M R G     F   S L+
Sbjct: 305 KVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLN 364

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           SC SL  +  G+Q+H   +K+ +D+D  V N L+ +YA    L+   KVF L+   + VS
Sbjct: 365 SCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVS 424

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           +N++I  ++  + LV EA+  + +MR +   P  +TF+++L  +SS  + +L  Q+H  +
Sbjct: 425 YNAMIEGYSRQDKLV-EALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLI 483

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
           IK+ V+ ++   +AL+  Y KC  + D   +F  + +R D V WN+M SGY       ++
Sbjct: 484 IKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDR-DIVVWNAMFSGYSQQLENEES 542

Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
           + L   +     + + FTFA V++A +++A+L  G + H   ++  L+ D  + ++LVDM
Sbjct: 543 LKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDM 602

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
           Y+KCG I+ + + F     R++  WNSMIS YA+HG   KAL +F +M ++G  P++VTF
Sbjct: 603 YAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTF 662

Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
           VG+LSACSHAGL+D GF HF+SMS+ +G+ P ++ ++CMV LLGRAG++ + +EF+ KMP
Sbjct: 663 VGLLSACSHAGLLDLGFHHFESMSK-FGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMP 721

Query: 726 ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDV 785
           I P +++WR++L AC  +     ELG  AA M    +P ++ +Y+LL+N++AS G W  V
Sbjct: 722 IKPAAVVWRSLLSACRVSG--HVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWASV 779

Query: 786 AKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
              R+ M  + V KE G SW+ + + VH F+A D +H +  LI   L  L  +++  GYV
Sbjct: 780 RMVREKMDMSRVVKEPGWSWIEVNNEVHRFIARDTAHRDSTLISLVLDNLILQIKGFGYV 839

Query: 846 PQTKFALFD 854
           P       D
Sbjct: 840 PNAATFFLD 848



 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 200/683 (29%), Positives = 331/683 (48%), Gaps = 57/683 (8%)

Query: 5   KLFHLQILKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           K  H  I+  GF  +DVFL NTL++ Y ++   + A KLFD MP RN V+W+ +VS YT 
Sbjct: 71  KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQ 130

Query: 64  KGMSNEACKMFKEMVRA-GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            G S EA  +F   +R+     N Y L SV+RAC + G       +Q+H  V+K     D
Sbjct: 131 HGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLG--NLSQALQLHGFVVKGGFVQD 188

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V   LI  Y       D AR IF+ ++ +  ++W +II+ Y++ G +    KLF++M 
Sbjct: 189 VYVGTSLIDFYAK-RGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQM- 246

Query: 183 REGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           REG  Y   P+ Y   S+++A +    L G    +QI   V + G   D+ V + ++  +
Sbjct: 247 REGDVY---PDRYVISSVLSACSMLEFLEGG---KQIHGYVLRRGFDMDVSVVNGIIDFY 300

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMN----------------------------------- 266
            +       RK+F +++ K+VVS                                     
Sbjct: 301 LKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCT 360

Query: 267 ------GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                 G ++  +KG++VH Y I+  + +   V NGL++MYAKC ++ ++R VF  +   
Sbjct: 361 SVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAI 420

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           + VS+N MI G  +     EA+  F  MR      +  + +S L   +SL  + L  QIH
Sbjct: 421 NVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIH 480

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
              +K G+  D    +AL+ +Y+    +     VF  + + D V WN++   ++  +   
Sbjct: 481 CLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYS-QQLEN 539

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
            E++K Y D++ +   PN  TF  ++AAAS+ +  + G Q H QVIK  + ++  + N+L
Sbjct: 540 EESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSL 599

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD 560
           +  Y KCG +++  K F+  + +RD   WNSMIS Y  +    KA+ +   M+  G + +
Sbjct: 600 VDMYAKCGSIEESHKAFSS-TNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPN 658

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
           + TF  +LSAC+    L+ G        +  +E  +   + +V +  + G+I  A  F  
Sbjct: 659 YVTFVGLLSACSHAGLLDLGFHHFESMSKFGIEPGIDHYACMVSLLGRAGKIYEAKEFVK 718

Query: 621 LMPVRN-VYSWNSMISGYARHGH 642
            MP++     W S++S     GH
Sbjct: 719 KMPIKPAAVVWRSLLSACRVSGH 741



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 212/396 (53%), Gaps = 10/396 (2%)

Query: 276 KEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           K++H +++  G     V + N L++ Y+K     D++ +F  M  ++ V+W++M+S   Q
Sbjct: 71  KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQ 130

Query: 335 NGCYEEAIMNFCA-MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           +G   EA++ FC  MR      + + L S + +C  LG +    Q+HG  +K G   DV 
Sbjct: 131 HGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVY 190

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD---SEALVSEAVKYYLDM 450
           V  +L+  YA  GY+     +F  +     V+W ++I  +A    SE     ++K +  M
Sbjct: 191 VGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEV----SLKLFNQM 246

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
           R     P+     ++L+A S     + G Q+H  V++     + ++ N ++  Y KC ++
Sbjct: 247 REGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKV 306

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
               K+F R+ + +D VSW +MI+G + N     AM+L   M+++G + D F   +VL++
Sbjct: 307 KTGRKLFNRLVD-KDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNS 365

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
           C S+  L++G +VHA  ++  ++ D  + + L+DMY+KC  +  A + FDL+   NV S+
Sbjct: 366 CGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSY 425

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFV 666
           N+MI GY+R     +AL LF +M+L    P  +TFV
Sbjct: 426 NAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFV 461



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 146/307 (47%), Gaps = 4/307 (1%)

Query: 377 QQIHGEGLKLGL-DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           ++IH   + LG    DV + N LL  Y+     S   K+F  MP  + V+W+S++  +  
Sbjct: 71  KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQ 130

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
               V   + +   MR     PN     +++ A +         Q+H  V+K     +  
Sbjct: 131 HGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVY 190

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           +  +L+  Y K G +D+   IF  + + +  V+W ++I+GY        ++ L   M + 
Sbjct: 191 VGTSLIDFYAKRGYVDEARLIFDGL-KVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREG 249

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
               D +  ++VLSAC+ +  LE G ++H   +R   + DV + + ++D Y KC ++   
Sbjct: 250 DVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTG 309

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHG-HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
            + F+ +  ++V SW +MI+G  ++  HGD A+ LF +M   G  PD      VL++C  
Sbjct: 310 RKLFNRLVDKDVVSWTTMIAGCMQNSFHGD-AMDLFVEMVRKGWKPDAFGCTSVLNSCGS 368

Query: 675 AGLVDEG 681
              + +G
Sbjct: 369 LQALQKG 375



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 5/263 (1%)

Query: 480 QVHAQVIKYNV-ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
           ++HA ++      ++  + N LL  Y K     D +K+F  M  R + V+W+SM+S Y  
Sbjct: 72  KIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHR-NLVTWSSMVSMYTQ 130

Query: 539 NELLPKAMNLV-WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
           +    +A+ L   FM    ++ + +  A+V+ AC  +  L + +++H   V+     DV 
Sbjct: 131 HGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVY 190

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           +G++L+D Y+K G +D A   FD + V+   +W ++I+GYA+ G  + +L LF+QM+   
Sbjct: 191 VGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGD 250

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
             PD      VLSACS    + EG K         G    +   + ++D   +  ++   
Sbjct: 251 VYPDRYVISSVLSACSMLEFL-EGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTG 309

Query: 718 EEFINKMPITPNSLIWRTVLGAC 740
            +  N++ +  + + W T++  C
Sbjct: 310 RKLFNRL-VDKDVVSWTTMIAGC 331


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 291/830 (35%), Positives = 442/830 (53%), Gaps = 122/830 (14%)

Query: 189 SLKPNEYTFGSLIT-AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           S++     +GSL+      S +S S L + + A +  +G     ++ + L+  +++    
Sbjct: 6   SIRTAANRYGSLLQICCLQSPISYS-LARPVHAHMIASGFQPRGHILNRLIDIYSKSSKL 64

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
            YAR +F+++ Q ++V+   L+                               Y+  G +
Sbjct: 65  NYARYLFDEIPQPDIVARTTLIAA-----------------------------YSAAGDL 95

Query: 308 DDSRSVFR-FMIG-KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
             SR +F    +G +DSV +N MI+    N     AI  FC M+RD     N++  S L 
Sbjct: 96  KLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLG 155

Query: 366 SCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNALLSLYAD---------AGYLSRCLKVF 415
           + A +       QQ+H   +K G     SV NAL+S Y           +  ++   K+F
Sbjct: 156 ALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLF 215

Query: 416 FLMPEHDQVSWNSVIGAFADSE---------------------ALVS---------EAVK 445
             MP  D++SW ++I  +  +                      A++S         EA +
Sbjct: 216 DEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFE 275

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT-----IENAL 500
            +  M  +    +  TF ++++  ++    +LG ++HA  +K  VAN        + NAL
Sbjct: 276 MFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLK-TVANPAPDVAMPVNNAL 334

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH-----------NELLPKAMNLV 549
           ++ Y KCG++D  ++IF +M ER D VSWN ++SGY++           NE+ P+   L 
Sbjct: 335 ITFYWKCGKVDIAQEIFNKMPER-DLVSWNIILSGYVNVRCMDEAKSFFNEM-PEKNILS 392

Query: 550 WFMMQRG----------------QRLDHF-----TFATVLSACASVATLERGMEVHACGV 588
           W +M  G                 +L  F      FA  + +C+ + +L+ G ++HA  V
Sbjct: 393 WIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVV 452

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
           R   E  +  G+AL+ MY++CG +D A   F  MP  +  SWN+MI+   +HG G +A+ 
Sbjct: 453 RYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIE 512

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           LF +M  +G LPD ++F+ V+SACSHAGLV EG K+F SM  VYG+ P  E ++ ++DLL
Sbjct: 513 LFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLL 572

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
            RAG+  + +E +  MP  P + IW  +L A CR +    +LG +AA  LFE++PQ+   
Sbjct: 573 CRAGKFSEAKEVMESMPFEPGAPIWEALL-AGCRIH-GNIDLGIEAAERLFELKPQHDGT 630

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
           YVLL+NMYA  G+W D+AK RK M++  VKKE GCSW+ +++ VH F+ GD +HPE   I
Sbjct: 631 YVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQI 690

Query: 829 YEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKLP---- 884
           Y  L++L  +MR  GYVP TK  L D+E + KE  +S HSEK+AVA+      KLP    
Sbjct: 691 YNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFM---KLPHGAT 747

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +R+ KNLR+CGDCH+AFKF+SK+VGREIV+RD  RFHHF DGKCSCGDYW
Sbjct: 748 VRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 139/561 (24%), Positives = 252/561 (44%), Gaps = 79/561 (14%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVSGYTHKGMSNEACKMFKE 76
           D+    TLI  Y   GDL  + K+F + P   R+SV +  +++ Y+H    + A ++F +
Sbjct: 78  DIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCD 137

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
           M R  F  + Y   SVL A         K   Q+HC V+KS   F   V N LI+ Y  C
Sbjct: 138 MQRDNFRPDNYTFTSVLGALALVAEKE-KHCQQLHCAVVKSGTGFVTSVLNALISSYVKC 196

Query: 137 LESTDC--------ARRIFEEIETRDLIS------------------------------- 157
             S           AR++F+E+  RD +S                               
Sbjct: 197 AASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVA 256

Query: 158 WNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLL 215
           WN++IS Y+ RG  +  F++F +M        ++ +E+TF S+I+   ++     G  + 
Sbjct: 257 WNAMISGYAHRGLYLEAFEMFRKM----IMSKIQLDEFTFTSVISVCANAGCFRLGKEMH 312

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG 275
              L  V        + V +AL++ + + G    A++IF +M ++++VS N ++ G    
Sbjct: 313 AYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSG---- 368

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
                                    Y     +D+++S F  M  K+ +SW  MISGL Q 
Sbjct: 369 -------------------------YVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQI 403

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G  EEA+  F  M+  G    +++    + SC+ LG +  G+Q+H + ++ G +S +S  
Sbjct: 404 GFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAG 463

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           NAL+++YA  G +     +F  MP  D +SWN++I A        ++A++ + +M + G 
Sbjct: 464 NALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALG-QHGQGTQAIELFEEMLKEGI 522

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCE 514
            P+ ++F+ +++A S   + K G +    +   Y V  +      ++    + G+  + +
Sbjct: 523 LPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAK 582

Query: 515 KIFARMSERRDEVSWNSMISG 535
           ++   M        W ++++G
Sbjct: 583 EVMESMPFEPGAPIWEALLAG 603



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 157/642 (24%), Positives = 262/642 (40%), Gaps = 124/642 (19%)

Query: 85  NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCAR 144
           NRY  GS+L+ C    P  +     VH  ++ S     G + N LI +Y       + AR
Sbjct: 12  NRY--GSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKS-SKLNYAR 68

Query: 145 RIFEEIETRDLIS---------------------------------WNSIISVYSQRGDT 171
            +F+EI   D+++                                 +N++I+ YS   D 
Sbjct: 69  YLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDG 128

Query: 172 ISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDL 231
            +  +LF  MQR+ FR    P+ YTF S++  A + V       QQ+   V K+G     
Sbjct: 129 HAAIELFCDMQRDNFR----PDNYTFTSVL-GALALVAEKEKHCQQLHCAVVKSGTGFVT 183

Query: 232 YVGSALVSGFARLGNFYY---------ARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYL 282
            V +AL+S + +               ARK+F++M  ++ +S   ++ G           
Sbjct: 184 SVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITG----------- 232

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
                             Y K   +D ++        K  V+WN MISG    G Y EA 
Sbjct: 233 ------------------YVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAF 274

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL----GLDSDVSVSNAL 398
             F  M    +    F+  S +S CA+ G   LG+++H   LK       D  + V+NAL
Sbjct: 275 EMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNAL 334

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL------------------- 439
           ++ Y   G +    ++F  MPE D VSWN ++  + +   +                   
Sbjct: 335 ITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWI 394

Query: 440 -----------VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
                        EA+K++  M+  G+ P    F   + + S     K G Q+HAQV++Y
Sbjct: 395 IMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRY 454

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNL 548
              +  +  NAL++ Y +CG +D    +F  M    D +SWN+MI+    +    +A+ L
Sbjct: 455 GYESSLSAGNALITMYARCGVVDAAHCLFINMP-CVDAISWNAMIAALGQHGQGTQAIEL 513

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEV-----HACGVRACLEFDVVIGSALV 603
              M++ G   D  +F TV+SAC+    ++ G +      +  GV      D    + ++
Sbjct: 514 FEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNP----DEEHYARII 569

Query: 604 DMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGD 644
           D+  + G+   A    + MP       W ++++G   HG+ D
Sbjct: 570 DLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNID 611



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 139/561 (24%), Positives = 225/561 (40%), Gaps = 120/561 (21%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGD---------LASASKLFDEMPDRNSV 52
           K  +  H  ++K G  +   + N LI+ YV+            +A A KLFDEMP+R+ +
Sbjct: 165 KHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDEL 224

Query: 53  SWACI-------------------------------VSGYTHKGMSNEACKMFKEMVRAG 81
           SW  I                               +SGY H+G+  EA +MF++M+ + 
Sbjct: 225 SWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSK 284

Query: 82  FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS--NQTFDGL--VSNVLIAMYGSCL 137
             L+ +   SV+  C   G   F+ G ++H   LK+  N   D    V+N LI  Y  C 
Sbjct: 285 IQLDEFTFTSVISVCANAG--CFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKC- 341

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVY-------------------------------S 166
              D A+ IF ++  RDL+SWN I+S Y                               +
Sbjct: 342 GKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLA 401

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
           Q G      K F+RM+ +GF    +P +Y F   I +   SVL      +Q+ A V + G
Sbjct: 402 QIGFAEEALKFFNRMKLQGF----EPCDYAFAGAIISC--SVLGSLKHGRQLHAQVVRYG 455

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------RKGKEVHG 280
             S L  G+AL++ +AR G    A  +F  M   + +S N ++          +  E+  
Sbjct: 456 YESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFE 515

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQN 335
            +++ G+         +++  +  G + + R  F  M     +  D   +  +I  L + 
Sbjct: 516 EMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRA 575

Query: 336 GCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           G + EA  +M          +       + L+ C   G I LG +      +L    D +
Sbjct: 576 GKFSEAKEVMESMPFEPGAPIWE-----ALLAGCRIHGNIDLGIEAAERLFELKPQHDGT 630

Query: 394 VSNALLS-LYADAGYLSRCLKVFFLM-----PEHDQVSWNSV---IGAFADSEALVSEAV 444
               LLS +YA AG  +   KV  LM      +    SW  V   + +F   +A   E  
Sbjct: 631 Y--VLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVR 688

Query: 445 KYY-------LDMRRAGWSPN 458
           + Y       L+MR+ G+ P+
Sbjct: 689 QIYNYLEQLVLEMRKIGYVPD 709


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 266/765 (34%), Positives = 431/765 (56%), Gaps = 56/765 (7%)

Query: 222 VKKAGLLSDLYVGSALVSGFARLG--NFYYARKIFEQMIQKNVVSMNGLME--------- 270
           + +A     L++ + L++ + RLG  + + AR++ ++M ++N VS N L++         
Sbjct: 36  IARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTE 95

Query: 271 --------------------------------GR-RKGKEVHGYLIRSGLFDMVAVGNGL 297
                                           GR ++GK VH   +  GL + V V N L
Sbjct: 96  ESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSL 155

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           V+MYA+CG + ++R VF     +D VSWN+++SG  + G +EE +  F  MRR  +  ++
Sbjct: 156 VSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNS 215

Query: 358 FSLISTLSSCASLGWIMLG--QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
           F+L S +  C+     + G  + +HG  +K GLD+D+ +++A++ +YA  G LS  + +F
Sbjct: 216 FALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALF 275

Query: 416 FLMPEHDQVSWNSVIGAFADSEA-----LVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
             + + + V +N++I      EA     +V EA+  Y +++  G  P   TF +++ A +
Sbjct: 276 KSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACN 335

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
                + G Q+H QV+K+    +  I +AL+  Y     M+D  + F R   ++D V+W 
Sbjct: 336 LAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCF-RSVPKQDVVTWT 394

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           +MISG + NEL  +A+ L   ++  G + D FT ++V++ACAS+A +  G ++     ++
Sbjct: 395 AMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKS 454

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
             +    +G++ + MY++ G ++ A + F  M   +V SW+++IS +A+HG   +AL  F
Sbjct: 455 GFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFF 514

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
           ++M     +P+ +TF+GVL+ACSH GLVDEG ++++ M   YGL P ++  +C+VDLLGR
Sbjct: 515 NEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGR 574

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
           AG L   E FI         ++W+++LG+ CR + R  E G+  A+ + E++P ++  YV
Sbjct: 575 AGRLADAEAFIRDSIFHDEPVVWQSLLGS-CRIH-RDMERGQLVADRIMELQPASSGCYV 632

Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
            L NMY   G+    +K R  MKE  VKKE G SW+ ++ G+H FVAGD+SHPE + IY 
Sbjct: 633 NLYNMYLDAGELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHSFVAGDKSHPECNAIYT 692

Query: 831 KLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMK 889
           KL E+  K+ D      T    +      +++ ++ HSEK+AVA  ++      PIR+MK
Sbjct: 693 KLAEMLSKI-DKLTTTDTSCIEWVETTGREQNWMNCHSEKLAVALGIIHLPQSAPIRVMK 751

Query: 890 NLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           NLRVC DCHS  K ISK   REI+LRD  RFHHF DG CSCGDYW
Sbjct: 752 NLRVCRDCHSTMKLISKSECREIILRDVIRFHHFRDGSCSCGDYW 796



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 186/702 (26%), Positives = 314/702 (44%), Gaps = 106/702 (15%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVG--DLASASKLFDEMPDRNSVSWACIVSGY 61
           A   H  I +   +  +FL NTL+  Y R+G  D   A +L DEMP RN+VS+  ++  Y
Sbjct: 29  AAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAY 88

Query: 62  THKGMSNEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           +  G + E+ + F    RA  +  +R+   + L AC   G    K G  VH L +     
Sbjct: 89  SRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGR--LKEGKVVHALAVLEGLA 146

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
               VSN L++MY  C +  + ARR+F+  E RD +SWNS++S Y + G    + ++F+ 
Sbjct: 147 EGVFVSNSLVSMYARCGDMGE-ARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFAL 205

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M+    R ++  N +  GS+I        S   + + +   V KAGL +DL++ SA+V  
Sbjct: 206 MR----RCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDM 261

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------- 274
           +A+ G    A  +F+ ++  NVV  N ++ G  +                          
Sbjct: 262 YAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGME 321

Query: 275 ---------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
                                GK++HG +++        +G+ L+++Y     ++D    
Sbjct: 322 PTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRC 381

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           FR +  +D V+W  MISG  QN  +E A+  F  +   GL    F++ S +++CASL  +
Sbjct: 382 FRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVV 441

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
             G+Q+     K G D   ++ N+ + +YA +G +   ++ F  M  HD VSW+++I + 
Sbjct: 442 RTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSH 501

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE 493
           A       +A++++ +M  A   PN +TF+ +L A S   +   G + + +++K      
Sbjct: 502 A-QHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYY-EIMKMEYGLC 559

Query: 494 TTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDE-VSWNSMI-SGYIHNELLPKAMNLV 549
            T+++   ++   G+ G + D E  F R S   DE V W S++ S  IH +         
Sbjct: 560 PTVKHCTCVVDLLGRAGRLADAEA-FIRDSIFHDEPVVWQSLLGSCRIHRD--------- 609

Query: 550 WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
              M+RGQ +                  +R ME+        +         L +MY   
Sbjct: 610 ---MERGQLV-----------------ADRIMELQPASSGCYVN--------LYNMYLDA 641

Query: 610 GRIDYASRFFDLMPVRNV-----YSWNSMISGYARHGHGDKA 646
           G +   S+  DLM  R V      SW  + SG      GDK+
Sbjct: 642 GELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHSFVAGDKS 683



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 220/484 (45%), Gaps = 64/484 (13%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K+ K+ H   +  G A  VF+ N+L+++Y R GD+  A ++FD   +R+ VSW  +VSGY
Sbjct: 131 KEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGY 190

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   E  ++F  M R    LN +ALGSV++ C     S       VH  V+K+    
Sbjct: 191 LRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDT 250

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK----- 176
           D  +++ ++ MY      ++ A  +F+ +   +++ +N++I+   +  D  +V K     
Sbjct: 251 DLFLASAMVDMYAKRGALSE-AVALFKSVLDPNVVVFNAMIAGLCR--DEAAVHKEVVRE 307

Query: 177 ---LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL-QQILAMVKKAGLLSDLY 232
              L+S +Q  G    ++P E+TF S+I A     L+G     +QI   V K     D +
Sbjct: 308 ALSLYSELQSRG----MEPTEFTFSSVIRACN---LAGDIEFGKQIHGQVLKHCFQGDDF 360

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--------------------- 271
           +GSAL+  +          + F  + +++VV+   ++ G                     
Sbjct: 361 IGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVG 420

Query: 272 --------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
                                R G+++  +  +SG     A+GN  ++MYA+ G ++ + 
Sbjct: 421 LKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAI 480

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
             F+ M   D VSW+ +IS   Q+GC  +A+  F  M    ++ +  + +  L++C+  G
Sbjct: 481 QRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGG 540

Query: 372 WIMLGQQIHGEGLKL--GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ-VSWNS 428
            +  G + + E +K+  GL   V     ++ L   AG L+           HD+ V W S
Sbjct: 541 LVDEGLRYY-EIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQS 599

Query: 429 VIGA 432
           ++G+
Sbjct: 600 LLGS 603


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 279/804 (34%), Positives = 424/804 (52%), Gaps = 88/804 (10%)

Query: 155 LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSSVLSGS 212
           +  +N+ I  + Q GD  +  +L    Q+            T+GS++   A   S+  G 
Sbjct: 66  VTDYNAKILHFCQLGDLENAMELVCMCQKSELETK------TYGSVLQLCAGLKSLTDG- 118

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR 272
              +++ +++K   +  D  +G  LVS +A  G+    R++F+ M +KNV          
Sbjct: 119 ---KKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNV---------- 165

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK------------ 320
                   YL            N +V+ YAK G   +S  +F+ M+ K            
Sbjct: 166 --------YL-----------WNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASE 206

Query: 321 --------DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
                   D +SWN+MISG   NG  E  +  +  M   G+     ++IS L  CA+ G 
Sbjct: 207 LFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGT 266

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
           + LG+ +H   +K   +  ++ SN LL +Y+  G L   L+VF  M E + VSW S+I  
Sbjct: 267 LSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAG 326

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN 492
           +   +     A+     M + G   + V   +IL A +       G  VH  +   N+A+
Sbjct: 327 YT-RDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMAS 385

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
              + NAL+  Y KCG M+    +F+ M   +D +SWN+M+      EL P         
Sbjct: 386 NLFVCNALMDMYAKCGSMEGANSVFSTMV-VKDIISWNTMVG-----ELKP--------- 430

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRI 612
                  D  T A +L ACAS++ LERG E+H   +R     D  + +ALVD+Y KCG +
Sbjct: 431 -------DSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVL 483

Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
             A   FD++P +++ SW  MI+GY  HG+G++A+  F++M+  G  PD V+F+ +L AC
Sbjct: 484 GLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYAC 543

Query: 673 SHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI 732
           SH+GL+++G++ F  M   + + P+LE ++CMVDLL R G L K  +FI  +PI P++ I
Sbjct: 544 SHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATI 603

Query: 733 WRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAM 792
           W  +L  C        EL  K A  +FE+EP+N   YVLLAN+YA   K E+V + R+ +
Sbjct: 604 WGALLCGC--RIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKI 661

Query: 793 KEAEVKKEAGCSWVTMKDGVHVFVAGDE-SHPEKDLIYEKLKELNQKMRDAGYVPQTKFA 851
            +  ++K  GCSW+ +K  V++FV+G+  SHP    I   LK++ +KM++ GY P+TK+A
Sbjct: 662 GKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYA 721

Query: 852 LFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGR 910
           L + +   KE  +  HSEK+A+AF +LT   +  IR+ KNLRVCGDCH   KF+SK   R
Sbjct: 722 LINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRR 781

Query: 911 EIVLRDSNRFHHFNDGKCSCGDYW 934
           EIVLRDSNRFHHF DG CSC  +W
Sbjct: 782 EIVLRDSNRFHHFKDGYCSCRGFW 805



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 218/455 (47%), Gaps = 53/455 (11%)

Query: 19  DVFLCNTLINVYVRVGDLA--------------------SASKLFDEMPDRNSVSWACIV 58
           +V+L N +++ Y ++GD                      SAS+LFD++ DR+ +SW  ++
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMI 223

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
           SGY   G++     ++K+M+  G  ++   + SVL  C   G      G  VH L +KS+
Sbjct: 224 SGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGT--LSLGKAVHSLAIKSS 281

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
                  SN L+ MY  C +  D A R+FE++  R+++SW S+I+ Y++ G +     L 
Sbjct: 282 FERRINFSNTLLDMYSKCGD-LDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILL 340

Query: 179 SRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
            +M++EG    +K +     S++ A A S  L      + +   +K   + S+L+V +AL
Sbjct: 341 QQMEKEG----VKLDVVAITSILHACARSGSLDNG---KDVHDYIKANNMASNLFVCNAL 393

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGL--------------------MEGRRKGKE 277
           +  +A+ G+   A  +F  M+ K+++S N +                    +    +GKE
Sbjct: 394 MDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKE 453

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +HGY++R+G      V N LV++Y KCG +  +R +F  +  KD VSW  MI+G   +G 
Sbjct: 454 IHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGY 513

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IHGEGLKLGLDSDVSVSN 396
             EAI  F  MR  G+     S IS L +C+  G +  G +  +       ++  +    
Sbjct: 514 GNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYA 573

Query: 397 ALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI 430
            ++ L +  G LS+  K    +P   D   W +++
Sbjct: 574 CMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 608



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 130/540 (24%), Positives = 236/540 (43%), Gaps = 114/540 (21%)

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           L     GSVL+ C   G      G +VH ++  ++   D  +   L++ Y +C +  +  
Sbjct: 97  LETKTYGSVLQLCA--GLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKE-G 153

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGD---TISVFKLFSRMQREGFRYSLKPNEY----- 195
           RR+F+ +E +++  WN ++S Y++ GD   +I +FK+      EG R       +     
Sbjct: 154 RRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCD 213

Query: 196 ----TFGSLITAAYSSVLS--GSYLLQQILAM---VKKAGLLS---------DLYVGSA- 236
               ++ S+I+   S+ L+  G  + +Q++ +   V  A ++S          L +G A 
Sbjct: 214 RDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAV 273

Query: 237 ------------------LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---- 274
                             L+  +++ G+   A ++FE+M ++NVVS   ++ G  +    
Sbjct: 274 HSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWS 333

Query: 275 -------------------------------------GKEVHGYLIRSGLFDMVAVGNGL 297
                                                GK+VH Y+  + +   + V N L
Sbjct: 334 DGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNAL 393

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           ++MYAKCG+++ + SVF  M+ KD +SWNTM+  L  +                     +
Sbjct: 394 MDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPD---------------------S 432

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
            ++   L +CASL  +  G++IHG  L+ G  SD  V+NAL+ LY   G L     +F +
Sbjct: 433 RTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM 492

Query: 418 MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
           +P  D VSW  +I  +       +EA+  + +MR AG  P+ V+FI+IL A S   + + 
Sbjct: 493 IPSKDLVSWTVMIAGYG-MHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQ 551

Query: 478 GHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           G +    ++K +   E  +E+   ++    + G +    K    +    D   W +++ G
Sbjct: 552 GWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 610



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 132/278 (47%), Gaps = 34/278 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H   +K  F   +   NTL+++Y + GDL  A ++F++M +RN VSW  +++GYT 
Sbjct: 270 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 329

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G S+ A  + ++M + G  L+  A+ S+L AC   G      G  VH  +  +N   + 
Sbjct: 330 DGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSG--SLDNGKDVHDYIKANNMASNL 387

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V N L+ MY  C  S + A  +F  +  +D+ISWN+++                     
Sbjct: 388 FVCNALMDMYAKC-GSMEGANSVFSTMVVKDIISWNTMVG-------------------- 426

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
                 LKP+  T   ++ A  S  LS     ++I   + + G  SD +V +ALV  + +
Sbjct: 427 -----ELKPDSRTMACILPACAS--LSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY 281
            G    AR +F+ +  K++VS   ++ G      +HGY
Sbjct: 480 CGVLGLARLLFDMIPSKDLVSWTVMIAGY----GMHGY 513



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 147/344 (42%), Gaps = 44/344 (12%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H  I  +  A ++F+CN L+++Y + G +  A+ +F  M  ++ +SW  +V G  
Sbjct: 370 NGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV-GEL 428

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                  AC                    +L AC     S  + G ++H  +L++  + D
Sbjct: 429 KPDSRTMAC--------------------ILPACASL--SALERGKEIHGYILRNGYSSD 466

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V+N L+ +Y  C      AR +F+ I ++DL+SW  +I+ Y   G        F+ M+
Sbjct: 467 RHVANALVDLYVKC-GVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMR 525

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ----ILAMVKKAGLLSDLYVGSALV 238
             G    ++P+E +F S++ A      S S LL+Q       M     +   L   + +V
Sbjct: 526 DAG----IEPDEVSFISILYAC-----SHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMV 576

Query: 239 SGFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG 296
              +R GN   A K  E + I  +      L+ G R   ++     +   +F++     G
Sbjct: 577 DLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTG 636

Query: 297 ----LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
               L N+YA+    ++ + + R  IGK  +  N   S ++  G
Sbjct: 637 YYVLLANIYAEAEKREEVKRM-REKIGKKGLRKNPGCSWIEIKG 679


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 238/654 (36%), Positives = 390/654 (59%), Gaps = 12/654 (1%)

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
           FD++ + N L+ MY KCG +  +  VF  M+ ++ VSW  ++ G  QNG   E+++ F  
Sbjct: 5   FDLM-LSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSK 63

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M   G+  ++F+  + L +C  L  + +G+QIH   +K G D    V N+++ +Y+  G 
Sbjct: 64  MGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGR 123

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           ++    +F +MP  + +SWN++I  +  +     +A+  +  M+  G   +  TF + L 
Sbjct: 124 INEAACMFEVMPVRNLISWNAMIAGYTVA-GFCEKALVLFQKMQEVGGFLDEFTFTSTLK 182

Query: 468 AASSFSMGKLGHQVHAQVIK--YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           A S     K G+Q+HA +I   +  +  T +  AL+  Y KCG++    ++F+ + E+  
Sbjct: 183 ACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKH- 241

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
            +SW ++I GY     L ++M L   + +   ++D F  ++++   A  A +++G ++HA
Sbjct: 242 VISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHA 301

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
             ++     D+ + ++++DMY KCG I+ A R F  MP RNV SW  MI+GY +HG G +
Sbjct: 302 FAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKE 361

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
           A+ LF +M+LD   PD VT++ VL  CSH+GLV++G ++F  +   +G+  ++E ++CMV
Sbjct: 362 AIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMV 421

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN 765
           DLLGRAG L + +  ++ MP+  N  IW+T+L A CR +    ELG++   +L  ++ +N
Sbjct: 422 DLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSA-CRVH-GDLELGKEVGGILLRLDSEN 479

Query: 766 AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
            VNYV+++N+YA  G W++  + R+ +K  ++KKEAG SWV +   VH F  GD++HP  
Sbjct: 480 PVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLT 539

Query: 826 DLIYEKLKELNQKMRDA-GYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLT----RN 880
           + I+E LKE+ ++M++  GYV   K+AL D+E ESK D +  HSEK+A+   L       
Sbjct: 540 EKIHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEE 599

Query: 881 SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            +  IR+ KNLRVCGDCH   K +SKI+    V+RD+NRFH F DG CSC DYW
Sbjct: 600 GRKVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 227/462 (49%), Gaps = 57/462 (12%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN----------------------- 266
           DL + + L+  + + G    A  +F++M+++NVVS                         
Sbjct: 6   DLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMG 65

Query: 267 ------------------GLMEGRRKGKEVHGYLIRSGLFDMV-AVGNGLVNMYAKCGTI 307
                             GL+ G   G+++H   +++G FDMV  VGN +++MY+KCG I
Sbjct: 66  LSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTG-FDMVNVVGNSIIDMYSKCGRI 124

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
           +++  +F  M  ++ +SWN MI+G    G  E+A++ F  M+  G     F+  STL +C
Sbjct: 125 NEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKAC 184

Query: 368 ASLGWIMLGQQIHGEGLKLGL--DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           + LG I  G QIH   +  G     + +V+ AL+ LY   G L    +VF  + E   +S
Sbjct: 185 SDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVIS 244

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           W ++I  +A  E  ++E+++ +  +R +    +G    +++   + F++ + G Q+HA  
Sbjct: 245 WTALILGYA-QEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFA 303

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
           IK     + ++ N++L  Y KCG +++ E++F+ M   R+ +SW  MI+GY  + L  +A
Sbjct: 304 IKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPA-RNVISWTVMITGYGKHGLGKEA 362

Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA--C---GVRACLEFDVVIGS 600
           + L   M       D  T+  VL  C+    +E+G E  +  C   G++A +E      +
Sbjct: 363 IRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHY----A 418

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHG 641
            +VD+  + GR+  A    D MP+  NV  W +++S    HG
Sbjct: 419 CMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHG 460



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 208/463 (44%), Gaps = 54/463 (11%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           GF +D+ L N LI +Y + G L  A  +FD M  RN VSW  ++ G+   G   E+  +F
Sbjct: 2   GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
            +M  +G   N +   + L+AC     +G   G Q+H + +K+      +V N +I MY 
Sbjct: 62  SKMGLSGVKPNDFTFSTNLKACGLL--NGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYS 119

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
            C    + A  +FE +  R+LISWN++I+ Y+  G       LF +MQ  G       +E
Sbjct: 120 KCGRINEAA-CMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFL----DE 174

Query: 195 YTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL--SDLYVGSALVSGFARLGNFYYARK 252
           +TF S + A   S L       QI A +   G L   +  V  AL+  + + G  + AR+
Sbjct: 175 FTFTSTLKAC--SDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARR 232

Query: 253 IFEQMIQKNVVSMNGLMEGR---------------------------------------- 272
           +F  + +K+V+S   L+ G                                         
Sbjct: 233 VFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFAL 292

Query: 273 -RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
            ++GK++H + I+      ++V N +++MY KCG I+++  +F  M  ++ +SW  MI+G
Sbjct: 293 VQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITG 352

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GLDS 390
             ++G  +EAI  F  M+ D     + + ++ L  C+  G +  GQ+         G+ +
Sbjct: 353 YGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKA 412

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
            V     ++ L   AG L     +   MP    V  W +++ A
Sbjct: 413 RVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSA 455



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 189/405 (46%), Gaps = 24/405 (5%)

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI-GAFADSEALVSEAV 444
           +G   D+ +SN L+ +Y   G L     VF  M + + VSW +++ G   +   L  E++
Sbjct: 1   MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPL--ESL 58

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
             +  M  +G  PN  TF   L A    +   +G Q+H   +K        + N+++  Y
Sbjct: 59  LLFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMY 118

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            KCG +++   +F  M   R+ +SWN+MI+GY       KA+ L   M + G  LD FTF
Sbjct: 119 SKCGRINEAACMFEVMP-VRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTF 177

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDV--VIGSALVDMYSKCGRIDYASRFFDLM 622
            + L AC+ +  ++ G ++HA  +     + V   +  AL+D+Y KCG++  A R F  +
Sbjct: 178 TSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHI 237

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
             ++V SW ++I GYA+ G+  +++ LF Q++      D      ++   +   LV +G 
Sbjct: 238 EEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQG- 296

Query: 683 KHFKSMSQVYGLIPQLEQFSC---MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
              K M      +P     S    ++D+  + G +++ E   ++MP   N + W  ++  
Sbjct: 297 ---KQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMP-ARNVISWTVMI-- 350

Query: 740 CCRANCRKTELGRKAANMLFEM-----EPQNAVNYVLLANMYASG 779
                  K  LG++A  +  EM     EP +     +L     SG
Sbjct: 351 ---TGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSG 392



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 209/434 (48%), Gaps = 46/434 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +  H   +K GF     + N++I++Y + G +  A+ +F+ MP RN +SW  +++GYT 
Sbjct: 92  GRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTV 151

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN--QTF 121
            G   +A  +F++M   G  L+ +   S L+AC + G    K G Q+H  ++      + 
Sbjct: 152 AGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGA--IKEGNQIHAFLITGGFLYSV 209

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V+  LI +Y  C      ARR+F  IE + +ISW ++I  Y+Q G+     +LF ++
Sbjct: 210 NTAVAGALIDLYVKC-GKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQL 268

Query: 182 QREGFRYSLKPNEYTFGSL--ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           +      S++ + +   S+  + A ++ V  G    +Q+ A   K     D+ V ++++ 
Sbjct: 269 RES----SIQVDGFILSSMMGVFADFALVQQG----KQMHAFAIKVPSGVDISVCNSILD 320

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---GKEVHGYLIRSGLFDMVAVGN- 295
            + + G    A ++F +M  +NV+S   ++ G  K   GKE     IR  LFD + + + 
Sbjct: 321 MYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEA----IR--LFDEMQLDST 374

Query: 296 --------GLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAI 342
                    ++   +  G ++  +  F  +     +      +  M+  L + G  +EA 
Sbjct: 375 EPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAK 434

Query: 343 MNFCAMRRDGLMSSNFSLIST-LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS- 400
               +M     + +N  +  T LS+C   G + LG+++   G+ L LDS+  V+  ++S 
Sbjct: 435 NLVDSMP----LEANVGIWQTLLSACRVHGDLELGKEVG--GILLRLDSENPVNYVMMSN 488

Query: 401 LYADAGYLSRCLKV 414
           +YADAGY   C ++
Sbjct: 489 IYADAGYWKECERI 502



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 46/76 (60%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H   +K     D+ +CN+++++Y++ G +  A +LF EMP RN +SW  +++GY
Sbjct: 294 QQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGY 353

Query: 62  THKGMSNEACKMFKEM 77
              G+  EA ++F EM
Sbjct: 354 GKHGLGKEAIRLFDEM 369


>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
          Length = 639

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 238/542 (43%), Positives = 345/542 (63%), Gaps = 9/542 (1%)

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           VSN+L S+YA  G L   L++F  MP  + V+W +V+ A A ++    EA+++ + MRR 
Sbjct: 106 VSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRD 165

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G +PN  TF ++L A ++  M      VHA  +K  + ++  + ++L+  Y K G++D  
Sbjct: 166 GVAPNAYTFSSVLGACTTPGMLT---AVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGG 222

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            ++F  M  R D V WNS+I+G+  +     A+ L   M   G   +  T  +VL AC  
Sbjct: 223 RRVFDEMVTR-DLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTG 281

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           +  LE G +VHA  ++   + D+++ +AL+DMY KCG ++ A   F  MP R+V SW++M
Sbjct: 282 MVMLEAGRQVHAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTM 339

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           +SG A++G   +AL +F  MK  G  P+HVT VGVL ACSHAGLV++G+ +F+SM +++G
Sbjct: 340 VSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFG 399

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           + P+ E  +CMVDLLGRAG+LD+  EFI+ M + P+S+IWRT+LGA CR + +   L   
Sbjct: 400 IQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGA-CRMH-KNASLAAY 457

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
           AA  + ++EP +    VLL+N YA   +W D  K  KAM++  ++KE G SW+ ++  VH
Sbjct: 458 AAREILKLEPDDQGARVLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVH 517

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
           VF+AGD SHP  D I ++L  L  +++  GYVPQT+F L DL  E KEDL+ YHSEK+A+
Sbjct: 518 VFIAGDLSHPCSDTIIQELNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAI 577

Query: 874 AF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
            F  +      PIRIMKNLR+CGDCH+  K +SK  GR IV+RD  RFHHF DG CSCGD
Sbjct: 578 VFGTMHAVDGKPIRIMKNLRICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGD 637

Query: 933 YW 934
           YW
Sbjct: 638 YW 639



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 174/353 (49%), Gaps = 56/353 (15%)

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS-VYSQRGDTISVFKLFSRMQ 182
            VSN L +MY       D A R+F+ +  R++++W ++++ + S  G      +    M+
Sbjct: 105 FVSNSLASMYAK-FGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMR 163

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           R+G    + PN YTF S++ A  +       +L  + A   KAGL SD++V S+L+  + 
Sbjct: 164 RDG----VAPNAYTFSSVLGACTTP-----GMLTAVHASTVKAGLDSDVFVRSSLIDAYV 214

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG---------------RRK------------- 274
           +LG+    R++F++M+ +++V  N ++ G               R K             
Sbjct: 215 KLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTS 274

Query: 275 -------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                        G++VH ++++    D++ + N L++MY KCG+++D+ ++F  M  +D
Sbjct: 275 VLRACTGMVMLEAGRQVHAHVLKYDR-DLI-LHNALLDMYCKCGSLEDADALFHRMPQRD 332

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            +SW+TM+SGL QNG   EA+  F  M+  G+  ++ +++  L +C+  G +  G     
Sbjct: 333 VISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFR 392

Query: 382 EGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
              +L G+  +    N ++ L   AG L   ++    M  E D V W +++GA
Sbjct: 393 SMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGA 445



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 160/343 (46%), Gaps = 43/343 (12%)

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS------------------MNGLMEGR 272
           L+V ++L S +A+ G    A ++F+ M  +NVV+                  +  L+  R
Sbjct: 104 LFVSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMR 163

Query: 273 RKG---------------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
           R G                       VH   +++GL   V V + L++ Y K G +D  R
Sbjct: 164 RDGVAPNAYTFSSVLGACTTPGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGR 223

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
            VF  M+ +D V WN++I+G  Q+G    AI  F  M+  G  S+  +L S L +C  + 
Sbjct: 224 RVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMV 283

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
            +  G+Q+H   LK   D D+ + NALL +Y   G L     +F  MP+ D +SW++++ 
Sbjct: 284 MLEAGRQVHAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVS 341

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNV 490
             A +   V EA++ +  M+  G +PN VT + +L A S   + + G H   +    + +
Sbjct: 342 GLAQNGKSV-EALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGI 400

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
             E    N ++   G+ G++D+  +    MS   D V W +++
Sbjct: 401 QPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLL 443



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 170/359 (47%), Gaps = 39/359 (10%)

Query: 5   KLFHLQILKHG-FAYD----VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           +L H  +  HG   +D    +F+ N+L ++Y + G L  A ++FD MP RN V+W  +V+
Sbjct: 84  RLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVA 143

Query: 60  GY-THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
              +  G   EA +    M R G   N Y   SVL AC   G         VH   +K+ 
Sbjct: 144 ALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTPG-----MLTAVHASTVKAG 198

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              D  V + LI  Y   L   D  RR+F+E+ TRDL+ WNSII+ ++Q GD +   +LF
Sbjct: 199 LDSDVFVRSSLIDAYVK-LGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELF 257

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
            RM+  GF      N+ T  S++ A    V+  +   +Q+ A V K     DL + +AL+
Sbjct: 258 MRMKDAGF----SSNQGTLTSVLRACTGMVMLEAG--RQVHAHVLKYD--RDLILHNALL 309

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMV---AVG 294
             + + G+   A  +F +M Q++V+S + ++ G  + GK V    +    FD++    V 
Sbjct: 310 DMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRV----FDLMKSQGVA 365

Query: 295 NGLVNMY------AKCGTIDDSRSVFR-----FMIGKDSVSWNTMISGLDQNGCYEEAI 342
              V M       +  G ++D    FR     F I  +    N M+  L + G  +EA+
Sbjct: 366 PNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAV 424


>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 271/704 (38%), Positives = 391/704 (55%), Gaps = 87/704 (12%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR-RKGK--EVHGYLIRSGLFDMV 291
           + ++S  A  G    AR  F+   +K+ VS NG++    R G+  E  G       +D++
Sbjct: 10  NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVI 69

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           +  N L++ Y + G + ++R +F  M G+D VSWN M+SG  + G   EA       RR 
Sbjct: 70  S-WNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEA-------RR- 120

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
                       L   A +                    DV    A++S YA  G L   
Sbjct: 121 ------------LFDAAPV-------------------RDVFTWTAVVSGYAQNGMLEEA 149

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
            +VF  MPE + VSWN+++ A+     ++ EA + +                N++     
Sbjct: 150 RRVFDAMPERNAVSWNAMVAAYIQRR-MMDEAKELF----------------NMMPCR-- 190

Query: 472 FSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
                            NVA+     N +L+ Y + G +++ + +F  M ++ D VSW +
Sbjct: 191 -----------------NVASW----NTMLTGYAQAGMLEEAKAVFDTMPQK-DAVSWAA 228

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC 591
           M++ Y       + + L   M + G+ ++   FA VLS CA +A LE GM++H   +RA 
Sbjct: 229 MLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAG 288

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
                 +G+AL+ MY KCG ++ A   F+ M  R+V SWN+MI+GYARHG G +AL +F 
Sbjct: 289 YGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFD 348

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRA 711
            M+     PD +T VGVL+ACSH+GLV++G  +F SM   +G+  + E ++CM+DLLGRA
Sbjct: 349 MMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRA 408

Query: 712 GELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVL 771
           G L +  + +  MP  P+S +W  +LGA  R + R  ELGR AA  +FE+EP+NA  YVL
Sbjct: 409 GRLAEAHDLMKDMPFEPDSTMWGALLGA-SRIH-RNPELGRSAAEKIFELEPENAGMYVL 466

Query: 772 LANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEK 831
           L+N+YAS GKW D  K R  M+E  VKK  G SW+ +++ VH F AGD  HPEK+ IY  
Sbjct: 467 LSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAF 526

Query: 832 LKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKN 890
           L++L+ +M+ AGYV  T   L D+E E KE ++ YHSEK+AVA+ +L      PIR++KN
Sbjct: 527 LEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKN 586

Query: 891 LRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           LRVCGDCH+AFK+IS I GR I+LRDSNRFHHF  G CSCGDYW
Sbjct: 587 LRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 125/524 (23%), Positives = 220/524 (41%), Gaps = 103/524 (19%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D    N +I+ +   G ++ A   FD  P++++VSW  +++ Y   G   EA  +F    
Sbjct: 5   DSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN--- 61

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
                                                 S   +D +  N L++ Y    +
Sbjct: 62  --------------------------------------SRTEWDVISWNALMSGYVQWGK 83

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
            ++ AR +F+ +  RD++SWN ++S Y++RGD +   +LF                    
Sbjct: 84  MSE-ARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD------------------- 123

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
                                     A  + D++  +A+VSG+A+ G    AR++F+ M 
Sbjct: 124 --------------------------AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP 157

Query: 259 QKNVVSMNGLMEG---RRKGKEVHGYLIRSGLFDM-----VAVGNGLVNMYAKCGTIDDS 310
           ++N VS N ++     RR   E         LF+M     VA  N ++  YA+ G ++++
Sbjct: 158 ERNAVSWNAMVAAYIQRRMMDEA------KELFNMMPCRNVASWNTMLTGYAQAGMLEEA 211

Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
           ++VF  M  KD+VSW  M++   Q GC EE +  F  M R G   +  +    LS+CA +
Sbjct: 212 KAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADI 271

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
             +  G Q+HG  ++ G      V NALL++Y   G +      F  M E D VSWN++I
Sbjct: 272 AALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMI 331

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYN 489
             +A       EA++ +  MR     P+ +T + +LAA S   + + G    ++    + 
Sbjct: 332 AGYA-RHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFG 390

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           V  +      ++   G+ G + +   +   M    D   W +++
Sbjct: 391 VTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL 434



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 148/310 (47%), Gaps = 23/310 (7%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           NT++  Y + G L  A  +FD MP +++VSWA +++ Y+  G S E  ++F EM R G  
Sbjct: 196 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 255

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           +NR A   VL  C +   +  + GMQ+H  ++++       V N L+AMY  C    D A
Sbjct: 256 VNRSAFACVLSTCADI--AALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMED-A 312

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF-GSLIT 202
           R  FEE+E RD++SWN++I+ Y++ G      ++F  M+      S KP++ T  G L  
Sbjct: 313 RNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTT----STKPDDITLVGVLAA 368

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
            ++S ++     +    +M    G+ +     + ++    R G    A  + + M  +  
Sbjct: 369 CSHSGLVEKG--ISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPD 426

Query: 263 VSMNGLMEGRRKGKEVH-----GYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSV 313
            +M G + G      +H     G      +F++     G    L N+YA  G   D+R +
Sbjct: 427 STMWGALLG---ASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKM 483

Query: 314 FRFMIGKDSV 323
            R M+ +  V
Sbjct: 484 -RVMMEERGV 492



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 143/306 (46%), Gaps = 53/306 (17%)

Query: 18  YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM 77
           +DV   N L++ YV+ G ++ A +LFD MP R+ VSW  +VSGY  +G   EA ++F   
Sbjct: 66  WDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD-- 123

Query: 78  VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS------NVLIA 131
             A  + + +   +V+    + G            ++ ++ + FD +        N ++A
Sbjct: 124 --AAPVRDVFTWTAVVSGYAQNG------------MLEEARRVFDAMPERNAVSWNAMVA 169

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-QREGFRYSL 190
            Y       D A+ +F  +  R++ SWN++++ Y+Q G       +F  M Q++   ++ 
Sbjct: 170 AYIQ-RRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAA 228

Query: 191 KPNEYTFGS------------------LITAAYSSVLSGSYLL------QQILAMVKKAG 226
               Y+ G                   +  +A++ VLS    +       Q+   + +AG
Sbjct: 229 MLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAG 288

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS- 285
                +VG+AL++ + + GN   AR  FE+M +++VVS N ++ G  +    HG+   + 
Sbjct: 289 YGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYAR----HGFGKEAL 344

Query: 286 GLFDMV 291
            +FDM+
Sbjct: 345 EIFDMM 350



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 125/260 (48%), Gaps = 29/260 (11%)

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE--RGM 581
           RD V++N MIS + ++ L+  A +      ++    D  ++  +L+A      +E  RG+
Sbjct: 4   RDSVTYNVMISSHANHGLVSLARHYFDLAPEK----DAVSWNGMLAAYVRNGRVEEARGL 59

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
                   +  E+DV+  +AL+  Y + G++  A   FD MP R+V SWN M+SGYAR G
Sbjct: 60  ------FNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRG 113

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
              +A  LF       P+ D  T+  V+S  +  G+++E  + F +M +   +      +
Sbjct: 114 DMVEARRLFDA----APVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAV-----SW 164

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM 761
           + MV    +   +D+ +E  N MP   N   W T+L    +A   +       A  +F+ 
Sbjct: 165 NAMVAAYIQRRMMDEAKELFNMMPCR-NVASWNTMLTGYAQAGMLEE------AKAVFDT 217

Query: 762 EPQ-NAVNYVLLANMYASGG 780
            PQ +AV++  +   Y+ GG
Sbjct: 218 MPQKDAVSWAAMLAAYSQGG 237



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 48/94 (51%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H ++++ G+    F+ N L+ +Y + G++  A   F+EM +R+ VSW  +++GY   G 
Sbjct: 280 LHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGF 339

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
             EA ++F  M       +   L  VL AC   G
Sbjct: 340 GKEALEIFDMMRTTSTKPDDITLVGVLAACSHSG 373



 Score = 46.6 bits (109), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 101/248 (40%), Gaps = 48/248 (19%)

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
           VR  + ++V+I S     ++  G +  A  +FDL P ++  SWN M++ Y R+G  ++A 
Sbjct: 3   VRDSVTYNVMISS-----HANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEAR 57

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS------------------ 689
            LF+         D +++  ++S     G + E  + F  M                   
Sbjct: 58  GLFNSRT----EWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRG 113

Query: 690 ------QVYGLIPQLEQFSCMVDLLGRA--GELDKIEEFINKMPITPNSLIWRTVLGACC 741
                 +++   P  + F+    + G A  G L++     + MP   N++ W  ++ A  
Sbjct: 114 DMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAAYI 172

Query: 742 RANCRKTELGRKAANMLFEMEP-QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKE 800
           +            A  LF M P +N  ++  +   YA  G  E+     KA+ +   +K+
Sbjct: 173 QRRMMDE------AKELFNMMPCRNVASWNTMLTGYAQAGMLEEA----KAVFDTMPQKD 222

Query: 801 AGCSWVTM 808
           A  SW  M
Sbjct: 223 A-VSWAAM 229



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 19/175 (10%)

Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD-GPLPDHVTFVGVLSACSHAGLVDE 680
           MPVR+  ++N MIS +A HG     L   ++   D  P  D V++ G+L+A    G V+E
Sbjct: 1   MPVRDSVTYNVMISSHANHG-----LVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEE 55

Query: 681 GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC 740
               F S ++ + +I     ++ ++    + G++ +  E  ++MP   + + W  ++   
Sbjct: 56  ARGLFNSRTE-WDVI----SWNALMSGYVQWGKMSEARELFDRMP-GRDVVSWNIMVSGY 109

Query: 741 CRANCRKTELGRKAANMLFEMEP-QNAVNYVLLANMYASGGKWEDVAKARKAMKE 794
            R            A  LF+  P ++   +  + + YA  G  E+  +   AM E
Sbjct: 110 ARRG------DMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPE 158


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 255/675 (37%), Positives = 376/675 (55%), Gaps = 41/675 (6%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR-RDGLMS 355
            + +Y+  G +  +R +F  +   D  +W  +IS L ++G   EAI  +   R ++ +  
Sbjct: 17  FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76

Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
               L+S   +CASL  +M  +++H + ++ G  SDV + NAL+ +Y           VF
Sbjct: 77  DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
             MP  D +SW S+   + +   L+ EA+  +  M   G  PN VT  +IL A +     
Sbjct: 137 EGMPFRDVISWTSMASCYVNC-GLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDL 195

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           K G +VH  V++  +     + +AL++ Y  C  +   + +F  MS RRD VSWN +I+ 
Sbjct: 196 KSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMS-RRDTVSWNVLITA 254

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDH---------------------------------- 561
           Y  N+   K +++   MM  G  L++                                  
Sbjct: 255 YFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPN 314

Query: 562 -FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
             T  +VL AC ++ +L  G ++H    R     D+   +ALV MY+KCG ++ + R F 
Sbjct: 315 QITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFS 374

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
           +M  R+  SWN+MI   + HG+G++AL LF +M   G  P+ VTF GVLS CSH+ LVDE
Sbjct: 375 MMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDE 434

Query: 681 GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC 740
           G   F SMS+ + + P  +  SCMVD+L RAG L++  EFI KMPI P +  W  +LG C
Sbjct: 435 GLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGC 494

Query: 741 CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKE 800
                +  ELGR AAN LFE+E  N  NYVLL+N+  S   W + ++ RK M++  V K 
Sbjct: 495 --RVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKN 552

Query: 801 AGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESK 860
            GCSW+ +++ VH FV GD+S+ + D IY  L  + +KMR AGY+P T F L D++ E K
Sbjct: 553 PGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEK 612

Query: 861 EDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNR 919
           E+++  HSEK+AVAF VL  N +  IR+ KNLR+CGDCH+A KF++KIVG +I++RDS R
Sbjct: 613 EEVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLR 672

Query: 920 FHHFNDGKCSCGDYW 934
           FHHF DG CSC D+W
Sbjct: 673 FHHFRDGLCSCQDFW 687



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 231/520 (44%), Gaps = 53/520 (10%)

Query: 26  LINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL-L 84
            I VY   GDL  A  LFD++P  +  +W  ++S  T  G S EA + + +      +  
Sbjct: 17  FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76

Query: 85  NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCAR 144
           ++  L SV +AC            +VH   ++     D L+ N LI MYG C   ++ AR
Sbjct: 77  DKLLLLSVAKACASL--RDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKC-RCSEGAR 133

Query: 145 RIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA 204
            +FE +  RD+ISW S+ S Y   G        F +M   G R    PN  T  S++ A 
Sbjct: 134 LVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGER----PNSVTVSSILPAC 189

Query: 205 --YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
                + SG    +++   V + G+  +++V SALV+ +A   +   A+ +F+ M +++ 
Sbjct: 190 TDLKDLKSG----REVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDT 245

Query: 263 VSMNGLMEGR------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
           VS N L+          KG  V G ++  G                              
Sbjct: 246 VSWNVLITAYFLNKECEKGLSVFGRMMSEG------------------------------ 275

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
            +G +  SWN +I G  QNG  E+A+     M+  G   +  ++ S L +C +L  +  G
Sbjct: 276 -VGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGG 334

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +QIHG   +     D++ + AL+ +YA  G L    +VF +M + D VSWN++I A    
Sbjct: 335 KQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIA-TSM 393

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETT 495
                EA+  + +M  +G  PN VTF  +L+  S   +   G  +   + + ++V  +  
Sbjct: 394 HGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDAD 453

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             + ++    + G +++  +   +M       +W +++ G
Sbjct: 454 HHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGG 493



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 172/389 (44%), Gaps = 79/389 (20%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           +AK  H   ++ GF  DV L N LI++Y +      A  +F+ MP R+ +SW  + S Y 
Sbjct: 96  NAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYV 155

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
           + G+  EA   F++M   G   N   + S+L AC +      K G +VH  V+++    +
Sbjct: 156 NCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDL--KDLKSGREVHGFVVRNGMGGN 213

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY----------------- 165
             VS+ L+ MY SCL S   A+ +F+ +  RD +SWN +I+ Y                 
Sbjct: 214 VFVSSALVNMYASCL-SIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMM 272

Query: 166 ------------------SQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS- 206
                              Q G T    ++ SRMQ  GF    KPN+ T  S++ A  + 
Sbjct: 273 SEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGF----KPNQITITSVLPACTNL 328

Query: 207 SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN 266
             L G    +QI   + +     DL   +ALV  +A+ G+   +R++F  M +++ VS N
Sbjct: 329 ESLRGG---KQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWN 385

Query: 267 GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG----KDS 322
            ++        +H              GNG           +++  +FR M+      +S
Sbjct: 386 TMI----IATSMH--------------GNG-----------EEALLLFREMVDSGVRPNS 416

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           V++  ++SG   +   +E ++ F +M RD
Sbjct: 417 VTFTGVLSGCSHSRLVDEGLLIFDSMSRD 445



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 134/326 (41%), Gaps = 45/326 (13%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H  ++++G   +VF+ + L+N+Y     +  A  +FD M  R++VSW  +++ Y
Sbjct: 196 KSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAY 255

Query: 62  -----------------------------------THKGMSNEACKMFKEMVRAGFLLNR 86
                                                 G + +A ++   M  +GF  N+
Sbjct: 256 FLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQ 315

Query: 87  YALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRI 146
             + SVL AC        + G Q+H  + +     D   +  L+ MY  C +  + +RR+
Sbjct: 316 ITITSVLPACTNL--ESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGD-LELSRRV 372

Query: 147 FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS 206
           F  +  RD +SWN++I   S  G+      LF  M   G R    PN  TF  +++    
Sbjct: 373 FSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVR----PNSVTFTGVLSGCSH 428

Query: 207 SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNVVSM 265
           S L    LL    +M +   +  D    S +V   +R G    A +  ++M I+    + 
Sbjct: 429 SRLVDEGLL-IFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAW 487

Query: 266 NGLMEGRRKGKEVH-GYLIRSGLFDM 290
             L+ G R  K V  G +  + LF++
Sbjct: 488 GALLGGCRVYKNVELGRIAANRLFEI 513


>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 721

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 271/730 (37%), Positives = 412/730 (56%), Gaps = 47/730 (6%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG 275
           + + A+  K+ + S  Y+ +  V+ +++ G   YAR  F+   + NV S N +       
Sbjct: 28  KSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVI------- 80

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
                                 V  YAK   I  +R +F      D+VS+NT+ISG    
Sbjct: 81  ----------------------VKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADA 118

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
                A++ F  MR  G     F+L   +++C     + L +Q+H   +  G DS  SV+
Sbjct: 119 RETVAAMVLFKRMRELGFEVDGFTLSGLIAACCDR--VDLIKQLHCFAVSGGFDSYSSVN 176

Query: 396 NALLSLYADAGYLSRCLKVFFLMPE-HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           NA ++ Y+  G L   + VF+ M    D+VSWNS+I A+   +   ++A+  Y +M   G
Sbjct: 177 NAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKE-GAKALALYKEMIFKG 235

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE---MD 511
           +  +  T  ++L A +S      G Q H ++IK      + + + L+  Y KCG    M 
Sbjct: 236 FKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMS 295

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR-GQRLDHFTFATVLSA 570
           D EK+F  +    D V WN+MISGY  NE   +     +  MQR G R D  +F  V SA
Sbjct: 296 DSEKVFQEILSP-DLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSA 354

Query: 571 CASVATLERGMEVHACGVRACLEFD-VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           C+++++  +G ++H   +++ +  + + + +AL+ +Y K G +  A R FD MP  N  S
Sbjct: 355 CSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVS 414

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           +N MI GYA+HGHG +AL L+ +M   G  P+++TFV +LSAC+H G VDEG K+F +M 
Sbjct: 415 FNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMK 474

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
           + + + P+ E +SCM+DLLGRAG+L++ E FI+ MP  P S+ W  +LGAC +   +   
Sbjct: 475 ETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH--KNMA 532

Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMK 809
           L  +AA  L  M+P  A  YV+LANMYA  GKWE++A  RK+M+   ++K+ GCSW+ +K
Sbjct: 533 LAERAAKELMVMQPLAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVK 592

Query: 810 DGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDL---VSY 866
              HVFVA D SHP    + E L+E+ +KM+  GYV   K+A+   +   + +    + +
Sbjct: 593 KKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGEEEMRLGH 652

Query: 867 HSEKIAVAFVL--TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFN 924
           HSEK+AVAF L  TR+ +  I ++KNLR+CGDCH+A KF+S + GREI++RD+ RFH F 
Sbjct: 653 HSEKLAVAFGLMSTRDGE-EIVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFK 711

Query: 925 DGKCSCGDYW 934
           DGKCSCGDYW
Sbjct: 712 DGKCSCGDYW 721



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 129/554 (23%), Positives = 232/554 (41%), Gaps = 102/554 (18%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLAS-------------------------- 38
           K  H   +K   A   +L N  +N+Y + G L+                           
Sbjct: 28  KSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAKD 87

Query: 39  -----ASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVL 93
                A +LFDE P  ++VS+  ++SGY     +  A  +FK M   GF ++ + L  ++
Sbjct: 88  SKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLI 147

Query: 94  RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY--GSCLESTDCARRIFEEIE 151
            AC +          Q+HC  +         V+N  +  Y  G  L     A  +F  ++
Sbjct: 148 AACCD----RVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLRE---AVSVFYGMD 200

Query: 152 -TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS--SV 208
             RD +SWNS+I  Y Q  +      L+  M  +GF+  +    +T  S++ A  S   +
Sbjct: 201 GLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDM----FTLASVLNALTSLDHL 256

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG---NFYYARKIFEQMIQKNVVSM 265
           + G    +Q    + KAG   + +VGS L+  +++ G       + K+F++++  ++V  
Sbjct: 257 IGG----RQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLW 312

Query: 266 NGLMEG------------------------------------------RRKGKEVHGYLI 283
           N ++ G                                            +GK++HG  I
Sbjct: 313 NTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAI 372

Query: 284 RSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
           +S +  + ++V N L+++Y K G + D+R VF  M   ++VS+N MI G  Q+G   EA+
Sbjct: 373 KSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEAL 432

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IHGEGLKLGLDSDVSVSNALLSL 401
             +  M   G+  +N + ++ LS+CA  G +  GQ+  +       ++ +    + ++ L
Sbjct: 433 RLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDL 492

Query: 402 YADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSE--ALVSEAVKYYLDMRRAGWSPN 458
              AG L    +    MP +   V+W +++GA    +  AL   A K  + M+    +P 
Sbjct: 493 LGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATPY 552

Query: 459 GVTFINILAAASSF 472
            V   N+ A A  +
Sbjct: 553 -VMLANMYADAGKW 565



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 4/129 (3%)

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           +F  +L    +   L  G  +HA  V++ +     + +  V++YSKCG + YA   FD  
Sbjct: 10  SFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDST 69

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
              NV+S+N ++  YA+    D  + +  Q+  + P PD V++  ++S  + A       
Sbjct: 70  EEPNVFSYNVIVKAYAK----DSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAM 125

Query: 683 KHFKSMSQV 691
             FK M ++
Sbjct: 126 VLFKRMREL 134


>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/707 (36%), Positives = 390/707 (55%), Gaps = 72/707 (10%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFD 289
           D ++ + L+  +A+ G    A+ +F+ M +++V S N L+                    
Sbjct: 57  DSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSA------------------ 98

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
                      YAK G +++   VF  M  +DSVS+NT+I+    NG   +A+     M+
Sbjct: 99  -----------YAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQ 147

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
            DG   + +S ++ L +C+ L  +  G+QIHG  +   L  +  V NA+  +YA  G + 
Sbjct: 148 EDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDID 207

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
           +   +F  M + + VSWN +I  +       +E +  + +M+ +G  P+ VT  N+L A 
Sbjct: 208 KARLLFDGMIDKNVVSWNLMISGYV-KMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNA- 265

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
                                             Y +CG +DD   +F ++  ++DE+ W
Sbjct: 266 ----------------------------------YFRCGRVDDARNLFIKLP-KKDEICW 290

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
            +MI GY  N     A  L   M++R  + D +T ++++S+CA +A+L  G  VH   V 
Sbjct: 291 TTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVV 350

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
             ++  +++ SALVDMY KCG    A   F+ MP+RNV +WN+MI GYA++G   +ALTL
Sbjct: 351 MGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTL 410

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           + +M+ +   PD++TFVGVLSAC +A +V EG K+F S+S+ +G+ P L+ ++CM+ LLG
Sbjct: 411 YERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISE-HGIAPTLDHYACMITLLG 469

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
           R+G +DK  + I  MP  PN  IW T+L  C + + +  EL   AA+ LFE++P+NA  Y
Sbjct: 470 RSGSVDKAVDLIQGMPHEPNYRIWSTLLSVCAKGDLKNAEL---AASHLFELDPRNAGPY 526

Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIY 829
           ++L+N+YA+ G+W+DVA  R  MKE   KK A  SWV + + VH FV+ D  HPE   IY
Sbjct: 527 IMLSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIY 586

Query: 830 EKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR--NSKLPIRI 887
            +L  L   ++  GY P T   L ++  E K   +SYHSEK+A+AF L R  N   PIRI
Sbjct: 587 GELNRLISILQQIGYNPDTNIVLHNVGEEEKFRSISYHSEKLALAFALIRKPNGVAPIRI 646

Query: 888 MKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +KN+RVC DCH   KF S  + R I++RDSNRFHHF  GKCSC D W
Sbjct: 647 IKNIRVCDDCHVFMKFASITISRPIIMRDSNRFHHFFGGKCSCNDNW 693



 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 216/396 (54%), Gaps = 15/396 (3%)

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           +F+++  RD +S+N++I+ ++  G +    K+  RMQ +GF    +P +Y+  + + A  
Sbjct: 111 VFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGF----QPTQYSHVNALQAC- 165

Query: 206 SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
           S +L   +  +QI   +  A L  + +V +A+   +A+ G+   AR +F+ MI KNVVS 
Sbjct: 166 SQLLDLRHG-KQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSW 224

Query: 266 NGLMEGRRK----GKEVHGY--LIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
           N ++ G  K     + +H +  +  SGL  D+V V N ++N Y +CG +DD+R++F  + 
Sbjct: 225 NLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSN-VLNAYFRCGRVDDARNLFIKLP 283

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            KD + W TMI G  QNG  E+A M F  M R  +   ++++ S +SSCA L  +  GQ 
Sbjct: 284 KKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQV 343

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           +HG+ + +G+D+ + VS+AL+ +Y   G       +F  MP  + ++WN++I  +A +  
Sbjct: 344 VHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQN-G 402

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
            V EA+  Y  M++  + P+ +TF+ +L+A  +  M K G +    + ++ +A       
Sbjct: 403 QVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYA 462

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            +++  G+ G +D    +   M    +   W++++S
Sbjct: 463 CMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLS 498



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 223/452 (49%), Gaps = 31/452 (6%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV+  NTL++ Y ++G + +   +FD+MP R+SVS+  +++ +   G S +A K+   M 
Sbjct: 88  DVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQ 147

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             GF   +Y+  + L+AC +      + G Q+H  ++ ++   +  V N +  MY  C +
Sbjct: 148 EDGFQPTQYSHVNALQACSQL--LDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGD 205

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             D AR +F+ +  ++++SWN +IS Y + G+      LF+ MQ  G    LKP+  T  
Sbjct: 206 -IDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSG----LKPDLVTVS 260

Query: 199 SLITAAY--SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           +++ A +    V     L    + + KK     D    + ++ G+A+ G    A  +F  
Sbjct: 261 NVLNAYFRCGRVDDARNLF---IKLPKK-----DEICWTTMIVGYAQNGREEDAWMLFGD 312

Query: 257 MIQKNV----------VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
           M+++NV          VS    +     G+ VHG ++  G+ + + V + LV+MY KCG 
Sbjct: 313 MLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGV 372

Query: 307 IDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
             D+R +F  M  ++ ++WN MI G  QNG   EA+  +  M+++     N + +  LS+
Sbjct: 373 TLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSA 432

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVS 425
           C +   +  GQ+      + G+   +     +++L   +G + + + +   MP E +   
Sbjct: 433 CINADMVKEGQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRI 492

Query: 426 WNSVIGAFADSE---ALVSEAVKYYLDMRRAG 454
           W++++   A  +   A ++ +  + LD R AG
Sbjct: 493 WSTLLSVCAKGDLKNAELAASHLFELDPRNAG 524



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 148/315 (46%), Gaps = 18/315 (5%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G   D+   + ++N Y R G +  A  LF ++P ++ + W  ++ GY   G   +A  +F
Sbjct: 251 GLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLF 310

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
            +M+R     + Y + S++ +C +   +    G  VH  V+        LVS+ L+ MY 
Sbjct: 311 GDMLRRNVKPDSYTISSMVSSCAKL--ASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYC 368

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
            C  + D AR IFE +  R++I+WN++I  Y+Q G  +    L+ RMQ+E F    KP+ 
Sbjct: 369 KCGVTLD-ARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENF----KPDN 423

Query: 195 YTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK 252
            TF  +++A  ++  V  G    Q+    + + G+   L   + +++   R G+   A  
Sbjct: 424 ITFVGVLSACINADMVKEG----QKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVD 479

Query: 253 IFEQMI-QKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTI 307
           + + M  + N    + L+    KG   +  L  S LF++     G    L N+YA CG  
Sbjct: 480 LIQGMPHEPNYRIWSTLLSVCAKGDLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRW 539

Query: 308 DDSRSVFRFMIGKDS 322
            D   V   M  K++
Sbjct: 540 KDVAVVRSLMKEKNA 554



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 48/279 (17%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H +I+      + F+ N + ++Y + GD+  A  LFD M D+N VSW  ++SGY
Sbjct: 172 RHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGY 231

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G  NE   +F EM  +G   +   + +VL A   CG                     
Sbjct: 232 VKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCG--------------------- 270

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
                              D AR +F ++  +D I W ++I  Y+Q G     + LF  M
Sbjct: 271 -----------------RVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDM 313

Query: 182 QREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
                R ++KP+ YT  S+++  A  +S+  G  +  +++ M    G+ + + V SALV 
Sbjct: 314 ----LRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVM----GIDNSMLVSSALVD 365

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEV 278
            + + G    AR IFE M  +NV++ N ++ G  +  +V
Sbjct: 366 MYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQV 404



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 1   SKDAKLFHLQILK-----HGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWA 55
           +K A L+H Q++       G    + + + L+++Y + G    A  +F+ MP RN ++W 
Sbjct: 333 AKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWN 392

Query: 56  CIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRAC 96
            ++ GY   G   EA  +++ M +  F  +      VL AC
Sbjct: 393 AMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSAC 433


>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 287/873 (32%), Positives = 454/873 (52%), Gaps = 112/873 (12%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR 168
           ++H  + KS    + ++ + LI +Y +  E  D A ++F++I + ++  WN +IS    +
Sbjct: 31  KLHARIFKSGFDGEDVLGSRLIDIYLAHGE-VDNAIKLFDDIPSSNVSFWNKVISGLLAK 89

Query: 169 GDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL 228
                V  LFS M  E    ++ P+E TF S++ A  S   +   + +QI A +   G  
Sbjct: 90  KLASQVLGLFSLMITE----NVTPDESTFASVLRAC-SGGKAPFQVTEQIHAKIIHHGFG 144

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS----MNGLMEGRRK---------- 274
           S   V + L+  +++ G+   A+ +FE++  K+ VS    ++GL +  R+          
Sbjct: 145 SSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQM 204

Query: 275 ---------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
                                      G+++HG++++ GL     V N LV +Y++ G +
Sbjct: 205 HKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNL 264

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
             +  +F  M  +D +S+N++ISGL Q G  + A+  F  M+ D +     ++ S LS+C
Sbjct: 265 IAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSAC 324

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
           AS+G    G+Q+H   +K+G+ SD+ +  +LL LY     +    + F      + V WN
Sbjct: 325 ASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWN 384

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
            ++ A+     L SE+   +L M+  G  PN  T+ +IL   +S     LG Q+H QVIK
Sbjct: 385 VMLVAYGQLGNL-SESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIK 443

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
                   + + L+  Y K GE+D    I  R+ E  D VSW +MI+GY  ++L  +A+ 
Sbjct: 444 SGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREE-DVVSWTAMIAGYTQHDLFAEALK 502

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL----- 602
           L   M  +G R D+  F++ +SACA +  L +G ++HA    +    D+ IG+AL     
Sbjct: 503 LFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALASNVL 562

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           + +YSKCG I+ A R F  MP +NV SWN+MI+GY++HG+G +A++L             
Sbjct: 563 ITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSL------------- 609

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFIN 722
                                 F+ M Q+ GL+P    F                   + 
Sbjct: 610 ----------------------FEEMKQL-GLMPNHVTF-------------------VG 627

Query: 723 KMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKW 782
           +MPI P+++IWRT+L AC     +  E+G  AA  L E+EP+++  YVLL+NMYA  GKW
Sbjct: 628 EMPIEPDAMIWRTLLSACTVH--KNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKW 685

Query: 783 EDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDA 842
           +   + R+ MK+  VKKE G SW+ +K+ +H F  GD  HP  + IYE + +LN++  + 
Sbjct: 686 DYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEI 745

Query: 843 GYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAF 901
           GYV      L D+E E K+     HSEK+AVAF +L+  + +PIR++KNLRVC DCH+  
Sbjct: 746 GYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWI 805

Query: 902 KFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           KF+SKI  R IV+RD+ RFHHF  G CSC DYW
Sbjct: 806 KFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 838



 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 198/687 (28%), Positives = 328/687 (47%), Gaps = 76/687 (11%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           DAK  H +I K GF  +  L + LI++Y+  G++ +A KLFD++P  N   W  ++SG  
Sbjct: 28  DAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLL 87

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            K ++++   +F  M+      +     SVLRAC   G + F+   Q+H  ++       
Sbjct: 88  AKKLASQVLGLFSLMITENVTPDESTFASVLRACS-GGKAPFQVTEQIHAKIIHHGFGSS 146

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            LV N LI +Y S     D A+ +FE +  +D +SW ++IS  SQ G       LF +M 
Sbjct: 147 PLVCNPLIDLY-SKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMH 205

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           +     ++ P  Y F S+++A     L    L +Q+   + K GL S+ +V +ALV+ ++
Sbjct: 206 KS----AVIPTPYVFSSVLSACTKIELFK--LGEQLHGFIVKWGLSSETFVCNALVTLYS 259

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRR----------------------------- 273
           R GN   A +IF +M +++ +S N L+ G                               
Sbjct: 260 RWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVAS 319

Query: 274 ------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                       KGK++H Y+I+ G+   + +   L+++Y KC  I+ +   F     ++
Sbjct: 320 LLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETEN 379

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            V WN M+    Q G   E+   F  M+ +GLM + ++  S L +C SLG + LG+QIH 
Sbjct: 380 VVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHT 439

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
           + +K G   +V V + L+ +YA  G L     +   + E D VSW ++I  +   + L +
Sbjct: 440 QVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHD-LFA 498

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA-- 499
           EA+K + +M   G   + + F + ++A +       G Q+HAQ      + + +I NA  
Sbjct: 499 EALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALA 558

Query: 500 ---LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
              L++ Y KCG ++D ++ F  M E ++ VSWN+MI+GY  +    +A++L   M Q G
Sbjct: 559 SNVLITLYSKCGSIEDAKREFFEMPE-KNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLG 617

Query: 557 QRLDHFTFA-------------TVLSACASVATLERGMEVHACGVRACLEF---DVVIGS 600
              +H TF              T+LSAC    T+ + +E+     R  LE    D     
Sbjct: 618 LMPNHVTFVGEMPIEPDAMIWRTLLSAC----TVHKNIEIGEFAARHLLELEPEDSATYV 673

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNV 627
            L +MY+  G+ DY  R   +M  R V
Sbjct: 674 LLSNMYAVSGKWDYRDRTRQMMKDRGV 700



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 257/519 (49%), Gaps = 20/519 (3%)

Query: 255 EQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
           E+ I+ NV +   L EG          K++H  + +SG      +G+ L+++Y   G +D
Sbjct: 3   ERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVD 62

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
           ++  +F  +   +   WN +ISGL       + +  F  M  + +     +  S L +C+
Sbjct: 63  NAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACS 122

Query: 369 -SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
                  + +QIH + +  G  S   V N L+ LY+  G++     VF  +   D VSW 
Sbjct: 123 GGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWV 182

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           ++I   + +     EA+  +  M ++   P    F ++L+A +   + KLG Q+H  ++K
Sbjct: 183 AMISGLSQN-GREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVK 241

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
           + +++ET + NAL++ Y + G +   E+IF++M  RRD +S+NS+ISG        +A+ 
Sbjct: 242 WGLSSETFVCNALVTLYSRWGNLIAAEQIFSKM-HRRDRISYNSLISGLAQRGFSDRALQ 300

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
           L   M     + D  T A++LSACASV    +G ++H+  ++  +  D++I  +L+D+Y 
Sbjct: 301 LFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYV 360

Query: 608 KCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVG 667
           KC  I+ A  +F      NV  WN M+  Y + G+  ++  +F QM+++G +P+  T+  
Sbjct: 361 KCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPS 420

Query: 668 VLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC--MVDLLGRAGELDKIEEFINKMP 725
           +L  C+  G +D G    +  +QV     Q   + C  ++D+  + GELD     + ++ 
Sbjct: 421 ILRTCTSLGALDLG---EQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR 477

Query: 726 ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ 764
              + + W  ++     A   + +L  +A  +  EME Q
Sbjct: 478 -EEDVVSWTAMI-----AGYTQHDLFAEALKLFQEMENQ 510



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 240/532 (45%), Gaps = 57/532 (10%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M   G+ ++  + +     C + G ++  +++H    K G D +  + + L+ +Y   G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +   +K+F  +P  +   WN VI     ++ L S+ +  +  M     +P+  TF ++L 
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLL-AKKLASQVLGLFSLMITENVTPDESTFASVLR 119

Query: 468 AASSFSMG-KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           A S      ++  Q+HA++I +   +   + N L+  Y K G +D  + +F R+   +D 
Sbjct: 120 ACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLF-LKDS 178

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           VSW +MISG   N    +A+ L   M +       + F++VLSAC  +   + G ++H  
Sbjct: 179 VSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGF 238

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            V+  L  +  + +ALV +YS+ G +  A + F  M  R+  S+NS+ISG A+ G  D+A
Sbjct: 239 IVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRA 298

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAG--------------------------LVDE 680
           L LF +M+LD   PD VT   +LSAC+  G                          L+D 
Sbjct: 299 LQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDL 358

Query: 681 GFKHFK-SMSQVYGLIPQLEQ---FSCMVDLLGRAGELDKIEEFINKMPIT---PNSLIW 733
             K F    +  Y L  + E    ++ M+   G+ G L +      +M I    PN   +
Sbjct: 359 YVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTY 418

Query: 734 RTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV--LLANMYASGGKWEDVAKARKA 791
            ++L  C        +LG +    + +   Q  V YV  +L +MYA  G+ +      + 
Sbjct: 419 PSILRTCTSLGA--LDLGEQIHTQVIKSGFQFNV-YVCSVLIDMYAKHGELDTARGILQR 475

Query: 792 MKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
           ++E +V      SW  M       +AG   H   DL  E LK L Q+M + G
Sbjct: 476 LREEDV-----VSWTAM-------IAGYTQH---DLFAEALK-LFQEMENQG 511


>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 231/513 (45%), Positives = 322/513 (62%), Gaps = 35/513 (6%)

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G  PN  T   ++ A +S +  + G Q H  +IK    ++  ++ AL+  Y +CG ++D 
Sbjct: 5   GVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDA 64

Query: 514 EKIFARMSER------------------------------RDEVSWNSMISGYIHNELLP 543
             +F +MSER                              RD VSW ++I+GY  N    
Sbjct: 65  GHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGD 124

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +++N+   M + G + D F   +VLSACA +A LE G + HA  V++    D+V+GSALV
Sbjct: 125 ESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALV 184

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           DMY+K G ++ A + FD MP RN  SWNS+I+G A+HG G+ A+ LF QM   G  P+ +
Sbjct: 185 DMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEI 244

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           +FVGVLSACSH GLV+EG  +F  M+Q YG++P +  ++CM+DLLGRAG LD+ E FIN 
Sbjct: 245 SFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFING 304

Query: 724 MPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKW 782
           MP+ P+  +W  +LGAC    N   TEL ++ A  L  ME Q A  YVLL+N+YA+ G+W
Sbjct: 305 MPVEPDVSVWGALLGACRIHGN---TELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQW 361

Query: 783 EDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDA 842
           +D AK RK MK+  V K+ G SW+ +K  +H FVAG+ SHP+   I+E L+ L++KM+ A
Sbjct: 362 DDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAA 421

Query: 843 GYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAF 901
           GYVP   F L D+E + KE  +S+HSEK+A+AF ++  N    IR+ KNLRVCGDCH+  
Sbjct: 422 GYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTVI 481

Query: 902 KFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           KFIS    R+IV+RD+NRFHHF DG+CSCGDYW
Sbjct: 482 KFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 172/397 (43%), Gaps = 78/397 (19%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK------------ 320
            +GK+ H Y+I+ G    V V   LV+MYA+CG+++D+  VF  M  +            
Sbjct: 27  EQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITGH 86

Query: 321 -------------------DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
                              D VSW  +I+G  QNG  +E++  F  MR+ G+ S  F + 
Sbjct: 87  AQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMG 146

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S LS+CA L  + LG+Q H   ++ G   D+ V +AL+ +YA +G +    +VF  MP+ 
Sbjct: 147 SVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQR 206

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH-Q 480
           ++VSWNS+I   A      ++AV  +  M +AG  PN ++F+ +L+A S   +   G   
Sbjct: 207 NEVSWNSIITGCA-QHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGY 265

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIH- 538
            +     Y +  + +    ++   G+ G +D+ E     M    D   W +++    IH 
Sbjct: 266 FNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHG 325

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
           N  L K                             +A    GMEV   G+   L      
Sbjct: 326 NTELAK----------------------------RIAEHLLGMEVQIAGIYVLLS----- 352

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNV-----YSW 630
                ++Y+  G+ D A++   LM  R V     YSW
Sbjct: 353 -----NIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSW 384



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 163/332 (49%), Gaps = 43/332 (12%)

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA------DA 405
           G+  + F+L + + +CAS+  +  G+Q H   +K+G +SDV V  AL+ +YA      DA
Sbjct: 5   GVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDA 64

Query: 406 GY-------------------------LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
           G+                         + + LK+F+ M E D VSW +VI  +A +    
Sbjct: 65  GHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN-GYG 123

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
            E++  +  MR+ G   +     ++L+A +  +  +LG Q HA V++   A +  + +AL
Sbjct: 124 DESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSAL 183

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD 560
           +  Y K G M+D  ++F +M + R+EVSWNS+I+G   +     A+ L   M+Q G + +
Sbjct: 184 VDMYAKSGSMEDACQVFDKMPQ-RNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPN 242

Query: 561 HFTFATVLSACASVATLERG-----MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
             +F  VLSAC+    +  G     +     G+      DV   + ++D+  + G +D A
Sbjct: 243 EISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVP----DVSHYTCMIDLLGRAGCLDEA 298

Query: 616 SRFFDLMPVR-NVYSWNSMISGYARHGHGDKA 646
             F + MPV  +V  W +++     HG+ + A
Sbjct: 299 ENFINGMPVEPDVSVWGALLGACRIHGNTELA 330



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 164/358 (45%), Gaps = 40/358 (11%)

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
           MV  G   N++ L +V++AC     +  + G Q H  ++K     D +V   L+ MY  C
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASI--ASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARC 58

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
               D A  +F+++  R   +WN++I+ ++Q  D     KLF         Y +   +  
Sbjct: 59  GSLED-AGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLF---------YEMSERDVV 108

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
             + + A Y+    G   L  +   ++K G+ SD ++  +++S  A L            
Sbjct: 109 SWTAVIAGYAQNGYGDESLN-VFNQMRKTGMKSDRFIMGSVLSACADLAAL--------- 158

Query: 257 MIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                             G++ H Y+++SG    + VG+ LV+MYAK G+++D+  VF  
Sbjct: 159 ----------------ELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDK 202

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M  ++ VSWN++I+G  Q+G   +A++ F  M + G+  +  S +  LS+C+  G +  G
Sbjct: 203 MPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEG 262

Query: 377 QQIHGEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
           +       +  G+  DVS    ++ L   AG L         MP    VS W +++GA
Sbjct: 263 RGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGA 320



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 157/357 (43%), Gaps = 53/357 (14%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVG--------------------------- 34
           +  K  H  I+K GF  DV +   L+++Y R G                           
Sbjct: 27  EQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITGH 86

Query: 35  ----DLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
               D+  A KLF EM +R+ VSW  +++GY   G  +E+  +F +M + G   +R+ +G
Sbjct: 87  AQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMG 146

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           SVL AC +   +  + G Q H  V++S    D +V + L+ MY       D A ++F+++
Sbjct: 147 SVLSACADL--AALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMED-ACQVFDKM 203

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL- 209
             R+ +SWNSII+  +Q G       LF +M + G    +KPNE +F  +++A   + L 
Sbjct: 204 PQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAG----IKPNEISFVGVLSACSHTGLV 259

Query: 210 ---SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN 266
               G + L     M +  G++ D+   + ++    R G    A      M  +  VS+ 
Sbjct: 260 NEGRGYFNL-----MTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVW 314

Query: 267 GLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFRFM 317
           G + G  R  G       I   L  M     G    L N+YA  G  DD+  V + M
Sbjct: 315 GALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLM 371



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 114/222 (51%), Gaps = 33/222 (14%)

Query: 552 MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR 611
           M+ +G + + FT +TV+ ACAS+A+LE+G + H   ++   E DVV+ +ALV MY++CG 
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 612 IDYASRFFDLMPVRNVYSWNSMIS-------------------------------GYARH 640
           ++ A   FD M  R+  +WN+MI+                               GYA++
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
           G+GD++L +F+QM+  G   D      VLSAC+    ++ G + F +     G    +  
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELG-RQFHAYVVQSGFALDIVV 179

Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
            S +VD+  ++G ++   +  +KMP   N + W +++  C +
Sbjct: 180 GSALVDMYAKSGSMEDACQVFDKMP-QRNEVSWNSIITGCAQ 220


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 263/722 (36%), Positives = 399/722 (55%), Gaps = 65/722 (9%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK---DSVSWNTMISG 331
           G+ +HG +  +G    V V N LV MY++CG+++D+  VF  +  K   D +SWN++++ 
Sbjct: 168 GRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAA 227

Query: 332 LDQNGCYEEAIMNFCAM------RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
             +      A+  F  M      +     S   S+++ L +CASL  +   ++IH   ++
Sbjct: 228 HVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIR 287

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS--------- 436
            G  +D  V NAL+  YA  G ++  +KVF +M   D VSWN+++  +  S         
Sbjct: 288 NGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFEL 347

Query: 437 ----------------EALVS---------EAVKYYLDMRRAGWSPNGVTFINILAAASS 471
                            A+++         EA+  +  M   G  PN VT I++L+A +S
Sbjct: 348 FENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACAS 407

Query: 472 FSMGKLGHQVHAQVIK------------YNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
                 G ++HA  +K                 +  + NAL+  Y KC        IF  
Sbjct: 408 LGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDS 467

Query: 520 MSER-RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL--DHFTFATVLSACASVAT 576
           +  R R+ V+W  MI GY        A+ +   M+ +   +  + +T + +L ACA +A 
Sbjct: 468 IPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAA 527

Query: 577 LERGMEVHACGVRACLEFD---VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           L  G ++HA   R   E++     + + L+DMYSKCG +D A   FD MP RN  SW SM
Sbjct: 528 LRMGKQIHAYVTRH-HEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSM 586

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           +SGY  HG G +AL +F +M+  G +PD ++F+ +L ACSH+G+VD+G  +F  M + Y 
Sbjct: 587 MSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYD 646

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           ++   E ++C++DLL R G LDK  + I +MP+ P+++IW  +L A CR +    EL   
Sbjct: 647 VVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSA-CRVH-SNVELAEY 704

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
           A N L  M+ +N  +Y L++N+YA+  +W+DVA+ R+ MK++ +KK  GCSWV  K G  
Sbjct: 705 ALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTA 764

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
            F  GD SHP    IY  L+ L  +++  GYVP+T FAL D++ E K +L+S HSEK+A+
Sbjct: 765 SFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLSEHSEKLAL 824

Query: 874 AF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           A+ +LT +   PIRI KNLRVCGDCHSAF +ISKIV  EI++RDS+RFHHF +G CSCG 
Sbjct: 825 AYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIIVRDSSRFHHFKNGSCSCGG 884

Query: 933 YW 934
           YW
Sbjct: 885 YW 886



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 177/679 (26%), Positives = 312/679 (45%), Gaps = 76/679 (11%)

Query: 14  HGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKM 73
           H +     L   ++  Y+  G    A  + + +    +V W  +V  +  +G  + A  +
Sbjct: 77  HSYVSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGV 136

Query: 74  FKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY 133
              M+RAG   + + L   L+AC E  PS +  G  +H L+  +    +  V N L+AMY
Sbjct: 137 SCRMLRAGTKPDHFTLPYALKACGEL-PS-YCCGRALHGLICCNGFESNVFVCNALVAMY 194

Query: 134 GSCLESTDCARRIFEEIETR---DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSL 190
             C    D A  +F+EI  +   D+ISWNSI++ + +  +  +  +LFS M       + 
Sbjct: 195 SRCGSLED-ASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKAT 253

Query: 191 KPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
                    +      + L     +++I +   + G  +D +V +AL+  +A+ G+   A
Sbjct: 254 NERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDA 313

Query: 251 RKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDS 310
            K+F  M  K+VVS N ++ G                             Y + G    +
Sbjct: 314 VKVFNVMEFKDVVSWNAMVTG-----------------------------YTQSGNFGAA 344

Query: 311 RSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
             +F  M    I  D ++W+ +I+G  Q GC +EA+  F  M  DG   ++ ++IS LS+
Sbjct: 345 FELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSA 404

Query: 367 CASLGWIMLGQQIHGEGLKLGLDS------------DVSVSNALLSLYADAGYLSRCLKV 414
           CASLG +  G +IH   LK  L S            D+ V NAL+ +Y+          +
Sbjct: 405 CASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSI 464

Query: 415 FFLMP--EHDQVSWNSVIGAFA---DSEALVSEAVKYYLDM--RRAGWSPNGVTFINILA 467
           F  +P  E + V+W  +IG +A   DS    ++A+K + +M  +    +PN  T   IL 
Sbjct: 465 FDSIPRRERNVVTWTVMIGGYAQYGDS----NDALKIFSEMISKPYAVAPNAYTISCILM 520

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETT--IENALLSCYGKCGEMDDCEKIFARMSERRD 525
           A +  +  ++G Q+HA V +++    +   + N L+  Y KCG++D    +F  M  +R+
Sbjct: 521 ACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSM-PKRN 579

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
           EVSW SM+SGY  +    +A+++   M + G   D  +F  +L AC+    +++G+    
Sbjct: 580 EVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFD 639

Query: 586 CGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARH 640
              R   ++DVV      + ++D+ ++CGR+D A +    MP+  +   W +++S    H
Sbjct: 640 IMRR---DYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVH 696

Query: 641 GH---GDKALTLFSQMKLD 656
            +    + AL     MK +
Sbjct: 697 SNVELAEYALNKLVNMKAE 715



 Score =  192 bits (488), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 140/507 (27%), Positives = 236/507 (46%), Gaps = 64/507 (12%)

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           ++G G+V  Y  CG   D+ SV   +    +V WN ++    + G  + AI   C M R 
Sbjct: 84  SLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRA 143

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G    +F+L   L +C  L     G+ +HG     G +S+V V NAL+++Y+  G L   
Sbjct: 144 GTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDA 203

Query: 412 LKVFFLMPEH---DQVSWNSVIGAFADSEALVSEAVKYYLDM------RRAGWSPNGVTF 462
             VF  +      D +SWNS++ A          A++ + +M      +      + ++ 
Sbjct: 204 SLVFDEITRKGIDDVISWNSIVAAHVKGSN-PRTALELFSEMSMIVHEKATNERSDIISI 262

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
           +NIL A +S        ++H+  I+     +  + NAL+  Y KCG M+D  K+F  M E
Sbjct: 263 VNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVM-E 321

Query: 523 RRDEVSWNSMISGYIHN---------------ELLP--------------------KAMN 547
            +D VSWN+M++GY  +               E +P                    +A++
Sbjct: 322 FKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALD 381

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL------------EFD 595
               M+  G   +  T  ++LSACAS+  L +GME+HA  ++ CL              D
Sbjct: 382 AFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGED 441

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMP--VRNVYSWNSMISGYARHGHGDKALTLFSQM 653
           +++ +AL+DMYSKC     A   FD +P   RNV +W  MI GYA++G  + AL +FS+M
Sbjct: 442 LMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEM 501

Query: 654 --KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS-CMVDLLGR 710
             K     P+  T   +L AC+H   +  G +    +++ +   P +   + C++D+  +
Sbjct: 502 ISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSK 561

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVL 737
            G++D      + MP   N + W +++
Sbjct: 562 CGDVDTARNVFDSMP-KRNEVSWTSMM 587



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 142/582 (24%), Positives = 255/582 (43%), Gaps = 82/582 (14%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR---NSVSWACIVSGY 61
           +  H  I  +GF  +VF+CN L+ +Y R G L  AS +FDE+  +   + +SW  IV+ +
Sbjct: 169 RALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAH 228

Query: 62  THKGMSNEACKMFKEM---VRAGFLLNRYALGSVLRACQECGP-SGFKFGMQVHCLVLKS 117
                   A ++F EM   V       R  + S++     C          ++H   +++
Sbjct: 229 VKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRN 288

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
               D  V N LI  Y  C    D A ++F  +E +D++SWN++++ Y+Q G+  + F+L
Sbjct: 289 GTFADAFVCNALIDTYAKCGSMND-AVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFEL 347

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F  M++E                                             D+   SA+
Sbjct: 348 FENMRKENIPL-----------------------------------------DVITWSAV 366

Query: 238 VSGFARLGNFYYARKIFEQMI----QKNVVSMNGLME------GRRKGKEVHGYLIRSGL 287
           ++G+A+ G    A   F+QMI    + N V++  L+          +G E+H Y ++  L
Sbjct: 367 IAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCL 426

Query: 288 FDM------------VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS--VSWNTMISGLD 333
             +            + V N L++MY+KC +   +RS+F  +  ++   V+W  MI G  
Sbjct: 427 LSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYA 486

Query: 334 QNGCYEEAIMNFCAM--RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG--LD 389
           Q G   +A+  F  M  +   +  + +++   L +CA L  + +G+QIH    +      
Sbjct: 487 QYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEP 546

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           S   V+N L+ +Y+  G +     VF  MP+ ++VSW S++  +        EA+  +  
Sbjct: 547 SVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYG-MHGRGKEALDIFDK 605

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCG 508
           M++AG+ P+ ++F+ +L A S   M   G      + + Y+V         ++    +CG
Sbjct: 606 MQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCG 665

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISG-YIHN--ELLPKAMN 547
            +D   K    M      V W +++S   +H+  EL   A+N
Sbjct: 666 RLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALN 707



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 128/553 (23%), Positives = 220/553 (39%), Gaps = 116/553 (20%)

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           S  S+   +++ Y   G     L V   +     V WN ++      E  +  A+     
Sbjct: 81  SPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHI-KEGHLDRAIGVSCR 139

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M RAG  P+  T    L A         G  +H  +      +   + NAL++ Y +CG 
Sbjct: 140 MLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGS 199

Query: 510 MDDCEKIFARMSER--RDEVSWNSMISGYIHN-------ELLPKAMNLVWFMMQRGQRLD 560
           ++D   +F  ++ +   D +SWNS+++ ++         EL  + M+++       +R D
Sbjct: 200 LEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSE-MSMIVHEKATNERSD 258

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
             +   +L ACAS+  L +  E+H+  +R     D  + +AL+D Y+KCG ++ A + F+
Sbjct: 259 IISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFN 318

Query: 621 LMPVRNVYSWNSM-----------------------------------ISGYARHGHGDK 645
           +M  ++V SWN+M                                   I+GYA+ G   +
Sbjct: 319 VMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQE 378

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF----------------------- 682
           AL  F QM LDG  P+ VT + +LSAC+  G + +G                        
Sbjct: 379 ALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGD 438

Query: 683 -----------------KHFKSMSQVYGLIPQLEQ----FSCMVDLLGRAGE----LDKI 717
                            + FK+   ++  IP+ E+    ++ M+    + G+    L   
Sbjct: 439 GEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIF 498

Query: 718 EEFINK-MPITPNSLIWRTVLGACCRANCRKTELGRKAANML---FEMEPQNAVNYVLLA 773
            E I+K   + PN+     +L AC  A+     +G++    +    E EP        L 
Sbjct: 499 SEMISKPYAVAPNAYTISCILMAC--AHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLI 556

Query: 774 NMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLK 833
           +MY+  G   DV  AR        + E   SW +M  G  +   G E+            
Sbjct: 557 DMYSKCG---DVDTARNVFDSMPKRNEV--SWTSMMSGYGMHGRGKEA-----------L 600

Query: 834 ELNQKMRDAGYVP 846
           ++  KM+ AG+VP
Sbjct: 601 DIFDKMQKAGFVP 613


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 297/970 (30%), Positives = 485/970 (50%), Gaps = 131/970 (13%)

Query: 2   KDAKLFHLQILKH--GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWAC--I 57
           K  +  H  IL          FL + LI ++ + G+LA A  L     DR +  ++C  +
Sbjct: 60  KQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEAL----ADRFASVYSCTAM 115

Query: 58  VSGYTHKGMSNEACKMFKEM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLK 116
           +  +   G  ++A ++F  M VR     N +AL +++ AC                    
Sbjct: 116 IRAWMEHGRPDKAMELFDRMEVRP----NCHALIALVNAC-------------------- 151

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDL----ISWNSIISVYSQRGDTI 172
                             SCL +    RRI  +I  RD     +  N++IS+YS+ G  I
Sbjct: 152 ------------------SCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLI 193

Query: 173 SVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLY 232
              + F R+ R   R                                          D+ 
Sbjct: 194 DAKQAFDRLPRASKR------------------------------------------DVV 211

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL-------------MEGRRKGKEVH 279
             +A++S F R G+   A ++F  M +      N +             +      + +H
Sbjct: 212 TWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIH 271

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS----VSWNTMISGLDQN 335
           G ++ +G+     V   LV+ Y K G++DD+  VF     ++     V+ + MIS   QN
Sbjct: 272 GRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQN 331

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GLDSDVSV 394
           G  +E++  F AM  +G   S  +L+S L++C+ L        +  + +++     D  +
Sbjct: 332 GWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVL 391

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
              LL+ YA +  L R    F  +   D VSWN++  A+        EA+  +  M   G
Sbjct: 392 GTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHR-SREALVLFERMLLEG 450

Query: 455 WSPNGVTFINILAAASSF---SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             P+  TFI  L A +++   +   +G ++ + + +  +  +T + NA L+ Y KCG + 
Sbjct: 451 VRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLA 510

Query: 512 DCEKIFARMSE-RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL---DHFTFATV 567
           D   +F R+S  RRD ++WNSM++ Y H+ L  +A  L  F     ++L   +  TF  V
Sbjct: 511 DARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFEL--FQAMEAEKLVKPNKVTFVAV 568

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV--R 625
           L A  S  ++ +G E+HA  V    E D VI +AL++MY+KCG +D A   FD       
Sbjct: 569 LDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQE 628

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
           +V +W S+I+GYA++G  ++AL LF  M+  G  P+HVTF+  L+AC+H G +++G +  
Sbjct: 629 DVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELL 688

Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANC 745
             M+  +G++P  + FSC+VDLLGR G LD+ E+ + +     + + W  +L AC   N 
Sbjct: 689 SGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDAC--KNS 745

Query: 746 RKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSW 805
           ++ E G + A  + +++P+ A +Y++LA+MYA+ G+W + A  RK M +  ++ + GCS 
Sbjct: 746 KELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSA 805

Query: 806 VTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVS 865
           V +   +H F AGD+SHP+ + IY +L+ L+  ++ AGYV  T   L D+  E KE L+ 
Sbjct: 806 VEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLM 865

Query: 866 YHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFN 924
            HSEK+A+AF +++  S  P+R++KNLRVC DCH+A K ISK+ GR+I++RDS+R+HHF 
Sbjct: 866 RHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFT 925

Query: 925 DGKCSCGDYW 934
            G CSCGDYW
Sbjct: 926 SGTCSCGDYW 935



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 122/290 (42%), Gaps = 39/290 (13%)

Query: 563 TFATVLSACASVATLERGMEVHA--CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
           T+  +L AC  +  L++G  +HA     R  L     + S L+ M++KCG +  A    D
Sbjct: 45  TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
                +VYS  +MI  +  HG  DKA+ LF +M++    P+    + +++ACS  G +  
Sbjct: 105 RFA--SVYSCTAMIRAWMEHGRPDKAMELFDRMEVR---PNCHALIALVNACSCLGNLAA 159

Query: 681 GFKHFKSMSQVYGLIPQLEQFS----CMVDLLGRAGELDKIEEFINKMPITP--NSLIWR 734
           G +    +S         E+ S     ++ +  + G L   ++  +++P     + + W 
Sbjct: 160 GRRIHSQISD-----RDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWN 214

Query: 735 TVLGACCRANCRKTELGRKAANMLFEME-----PQNAVNYVLLANMYASGG--KWEDVAK 787
            ++ A  R         R+A  +  +M+     P N+V +V + +     G    EDV  
Sbjct: 215 AMISAFLRNGS-----AREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRA 269

Query: 788 ARKAMKEAEVKKEAGCSWV---------TMKDGVHVFVAGDESHPEKDLI 828
               +  A +++EA              ++ D   VF+   +  P   L+
Sbjct: 270 IHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLV 319


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 254/650 (39%), Positives = 380/650 (58%), Gaps = 17/650 (2%)

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           N L+  YAK   I  +  +F  +   D VS+NT+I+     G    A+  F  MR  GL+
Sbjct: 78  NALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLV 137

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
              F+    +++C +   + L +Q+H      G DS VSV N+LL+ Y+  G L     V
Sbjct: 138 MDGFTFSGVITACCN--HVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMV 195

Query: 415 FFLMPEH--DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
           F  M E   D+VSWNS+I A+   +  + +A+  Y DM   G+  +  T  ++L   S  
Sbjct: 196 FNGMGEEVRDEVSWNSMIVAYGQHKRGL-KALALYRDMVHRGFEIDMFTLASVLTTFSCV 254

Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE-MDDCEKIFARMSERRDEVSWNS 531
                G Q HA+ IK        + + L+  Y KCG  M +  K+F  +    D V WN+
Sbjct: 255 EDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGS-DLVVWNT 313

Query: 532 MISGYIHN-ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           MISGY  N EL  +A+     M + G   D  +F   +SAC+++++  +G + HA  +++
Sbjct: 314 MISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKS 373

Query: 591 CLEFD-VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
            +  + + + +ALV MYSKCG +  A + F  MP  N  + NS+I+GYA+HG G ++L L
Sbjct: 374 EIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNL 433

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           F QM      P  +T V +LSAC+H G V+EG K+F  M  ++G+ P+ E +SCM+DLLG
Sbjct: 434 FEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLG 493

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
           RAG+L + E  I+ MP +P S  W  +LGAC +      EL  KAAN   ++EP NAV Y
Sbjct: 494 RAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYG--NMELAEKAANQFLQLEPTNAVPY 551

Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIY 829
           ++LA+MY++  KWE+ A+ RK M++  ++K+ GCSW+ +   VHVFVA D SHP    I+
Sbjct: 552 IMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIH 611

Query: 830 EKLKELNQKMRDAGYVPQTKFALF---DLEPESKEDLVSYHSEKIAVAF--VLTRNSKLP 884
             L E+  KM+ AGYVP  ++A     +   + KE ++++HSEK+AVAF  + T++ + P
Sbjct: 612 MYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTKHGE-P 670

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           + ++KNLR+CGDCH+A KF+S I  R+I +RD+ RFH F DG+CSCGDYW
Sbjct: 671 LLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 144/567 (25%), Positives = 266/567 (46%), Gaps = 56/567 (9%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G  +H + LKS       +SN  I +Y  C   T  A   F +    ++ S+N++I+ Y+
Sbjct: 27  GKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTT-AHHAFNQTHEPNVFSFNALIAAYA 85

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
           +         LF ++         +P+  +F +LI A      + S L   +   +++ G
Sbjct: 86  KESLIHVAHHLFDQIP--------QPDLVSFNTLINAYADRGDTLSAL--SLFGEMREMG 135

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSG 286
           L+ D +  S +++                        +  GL+      +++H     SG
Sbjct: 136 LVMDGFTFSGVITA---------------------CCNHVGLI------RQLHSLAFSSG 168

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG--KDSVSWNTMISGLDQNGCYEEAIMN 344
               V+V N L+  Y+K G ++++  VF  M    +D VSWN+MI    Q+    +A+  
Sbjct: 169 FDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALAL 228

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           +  M   G     F+L S L++ + +  +  G Q H + +K G + +  V + L+ +YA 
Sbjct: 229 YRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAK 288

Query: 405 AGY-LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
            G  +S   KVF  +   D V WN++I  ++ ++ L  EA++ +  M+RAG+ P+  +F+
Sbjct: 289 CGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFV 348

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNV-ANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
             ++A S+ S    G Q HA  +K  + +N+ ++ NAL++ Y KCG + D  K+F RM +
Sbjct: 349 CAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQ 408

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG-- 580
             + V+ NS+I+GY  + +  +++NL   M+         T  ++LSACA    +E G  
Sbjct: 409 -HNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKK 467

Query: 581 ---MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISG 636
              M     G+    E +    S ++D+  + G++  A R  D MP      +W +++  
Sbjct: 468 YFNMMKDIFGI----EPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGA 523

Query: 637 YARHGH---GDKALTLFSQMKLDGPLP 660
             ++G+    +KA   F Q++    +P
Sbjct: 524 CRKYGNMELAEKAANQFLQLEPTNAVP 550



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 220/494 (44%), Gaps = 71/494 (14%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +VF  N LI  Y +   +  A  LFD++P  + VS+  +++ Y  +G +  A  +F EM 
Sbjct: 73  NVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMR 132

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS--NVLIAMYGS- 135
             G +++ +    V+ AC  C   G     Q+H L   S   FD  VS  N L+  Y   
Sbjct: 133 EMGLVMDGFTFSGVITAC--CNHVGLI--RQLHSLAFSSG--FDSYVSVKNSLLTYYSKN 186

Query: 136 -CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
             LE  +       E E RD +SWNS+I  Y Q    +    L+  M   GF   +    
Sbjct: 187 GILEEAEMVFNGMGE-EVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDM---- 241

Query: 195 YTFGSLITAAYSSV--LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG-NFYYAR 251
           +T  S++T  +S V  LSG     Q  A   K G   + +VGS L+  +A+ G     +R
Sbjct: 242 FTLASVLT-TFSCVEDLSGGL---QFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESR 297

Query: 252 KIFEQMIQKNVVSMNGLMEG---------------------------------------- 271
           K+FE++   ++V  N ++ G                                        
Sbjct: 298 KVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNL 357

Query: 272 --RRKGKEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
               +GK+ H   ++S +  + ++V N LV MY+KCG + D+R +F+ M   ++V+ N++
Sbjct: 358 SSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSI 417

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-G 387
           I+G  Q+G   E++  F  M    +  ++ +L+S LS+CA  G +  G++       + G
Sbjct: 418 IAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFG 477

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA---FADSEALVSEA 443
           ++ +    + ++ L   AG LS   ++   MP      +W +++GA   + + E L  +A
Sbjct: 478 IEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNME-LAEKA 536

Query: 444 VKYYLDMRRAGWSP 457
              +L +      P
Sbjct: 537 ANQFLQLEPTNAVP 550



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 226/491 (46%), Gaps = 56/491 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVSGYT 62
           +  H      GF   V + N+L+  Y + G L  A  +F+ M +  R+ VSW  ++  Y 
Sbjct: 158 RQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYG 217

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLR--ACQECGPSGFKFGMQVHCLVLKSNQT 120
                 +A  ++++MV  GF ++ + L SVL   +C E        G+Q H   +K+   
Sbjct: 218 QHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVE----DLSGGLQFHAKAIKTGFN 273

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD-TISVFKLFS 179
            +  V + LI MY  C      +R++FEEI   DL+ WN++IS YSQ  + ++   + F 
Sbjct: 274 KNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFR 333

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD-LYVGSALV 238
           +MQR G+     P++ +F   I+A   S LS     +Q  A+  K+ + S+ + V +ALV
Sbjct: 334 QMQRAGYW----PDDCSFVCAISAC--SNLSSPSQGKQFHALAMKSEIPSNQISVNNALV 387

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS-GLFDMVAVGN-- 295
           + +++ GN   ARK+F++M Q N V++N ++ G  +    HG    S  LF+ +   +  
Sbjct: 388 TMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQ----HGIGTESLNLFEQMLAASIA 443

Query: 296 ----GLVNMYAKC---GTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEAIM 343
                LV++ + C   G +++ +  F  M     I  ++  ++ MI  L + G   EA  
Sbjct: 444 PTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAER 503

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
               M        + +  + L +C   G + L ++   + L+L   + V     L S+Y+
Sbjct: 504 LIDTM---PFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYI-MLASMYS 559

Query: 404 DAGYLSRCLKVFFLM--------PEHDQVSWNSVIGAFA---DSEALVSEAVKYYLD--- 449
            A       ++  LM        P    +  N  +  F    +S   + E +  YLD   
Sbjct: 560 AARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKE-IHMYLDEMF 618

Query: 450 --MRRAGWSPN 458
             M+RAG+ P+
Sbjct: 619 VKMKRAGYVPD 629



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 85/194 (43%), Gaps = 36/194 (18%)

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           +F  +L +C +   L  G  +H   +++ +     + +  + +YSKC  +  A   F+  
Sbjct: 10  SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69

Query: 623 PVRNVYSWNSMISGYAR--------------------------HGHGDK-----ALTLFS 651
              NV+S+N++I+ YA+                          + + D+     AL+LF 
Sbjct: 70  HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129

Query: 652 QMKLDGPLPDHVTFVGVLSA-CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
           +M+  G + D  TF GV++A C+H GL+    +   S++   G    +   + ++    +
Sbjct: 130 EMREMGLVMDGFTFSGVITACCNHVGLI----RQLHSLAFSSGFDSYVSVKNSLLTYYSK 185

Query: 711 AGELDKIEEFINKM 724
            G L++ E   N M
Sbjct: 186 NGILEEAEMVFNGM 199


>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Brachypodium distachyon]
          Length = 689

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 262/671 (39%), Positives = 376/671 (56%), Gaps = 16/671 (2%)

Query: 273 RKGKEVHGYLIR---SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
           R G+  H   +R    GL   +     LVN+Y+K      + S          VS+   I
Sbjct: 26  RLGRAAHARALRLLSPGLPPFICAH--LVNLYSKLDLPAAAASALASDPNPTVVSFTAFI 83

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL--SSCASLGWIMLGQQIHGEGLKLG 387
           SG  Q+     A+  F AM R GL  ++F+  S    ++CA      +G QIH   L+ G
Sbjct: 84  SGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFG 143

Query: 388 -LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI-GAFADSEALVSEAVK 445
            L  D  VS A + +Y   G L    ++F  MP  + ++WN+V+  A  D   L  E  K
Sbjct: 144 YLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPL--ETFK 201

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            Y  +R AG  PN V+      A +      LG Q H  V+      + ++ NA++  YG
Sbjct: 202 AYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYG 261

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           KC        +F  M   R+ VSW SMI  Y  +     A+ +       G+    F  +
Sbjct: 262 KCRCAGKARAVFDGM-RVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVS 320

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           +VL+ CA +  L  G  +HA  VR+C++ ++ + SALVDMY KCG ++ A + F  MP R
Sbjct: 321 SVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPER 380

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQM-KLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           N+ +WN+MI GYA  G    AL +F  M +  G  P+H+T V V++ACS  GL  +G++ 
Sbjct: 381 NLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYEL 440

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           F +M + +G+ P+ E ++C+VDLLGRAG  ++  E I +MP+ P+  +W  +LGAC    
Sbjct: 441 FDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHG 500

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
             KTELGR A+  LFE++PQ++ N+VLL+NM AS G+W +    RK MK   +KKE GCS
Sbjct: 501 --KTELGRIASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKEPGCS 558

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLV 864
           W+T K+ VHVF A D  H     I   L +L ++M+ +GY+P T+++L+D+E E KE  V
Sbjct: 559 WITWKNVVHVFYAKDTKHDRNSEIQALLAKLKKQMQASGYMPDTQYSLYDVEEEEKETEV 618

Query: 865 SYHSEKIAVAFVLTR-NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
             HSEK+A+AF L      +PIRI KNLR+C DCH AFKF+S IVGREI++RD+NRFH+F
Sbjct: 619 FQHSEKLALAFGLIHIPPSVPIRITKNLRICVDCHRAFKFVSGIVGREIIVRDNNRFHYF 678

Query: 924 NDGKCSCGDYW 934
              +CSC DYW
Sbjct: 679 KQFECSCKDYW 689



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 128/517 (24%), Positives = 218/517 (42%), Gaps = 67/517 (12%)

Query: 9   LQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSN 68
           L++L  G     F+C  L+N+Y ++   A+A+      P+   VS+   +SG        
Sbjct: 36  LRLLSPGL--PPFICAHLVNLYSKLDLPAAAASALASDPNPTVVSFTAFISGAAQHARPL 93

Query: 69  EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-TFDGLVSN 127
            A   F  M+R G   N +   S  +A     P     G Q+H L L+      D  VS 
Sbjct: 94  AALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLPGDPFVSC 153

Query: 128 VLIAMY--GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
             + MY    CL     ARR+FEE+  R++I+WN++++     G  +  FK +  ++  G
Sbjct: 154 AAMDMYFKTGCL---GLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAG 210

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
                 PN  +  +   A   ++     L +Q    V   G   D+ V +A+V  + +  
Sbjct: 211 G----MPNVVSVCAFFNACAGAMFLS--LGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCR 264

Query: 246 NFYYARKIFEQMIQKNVVSMNGL-----------------MEGRRKGKE----------- 277
               AR +F+ M  +N VS   +                 M  R  G+E           
Sbjct: 265 CAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLT 324

Query: 278 -------------VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                        +H   +RS +   + V + LV+MY KCG ++D+  VF  M  ++ V+
Sbjct: 325 TCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVT 384

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEG 383
           WN MI G    G  + A+  F AM R G  S N  +L++ +++C+  G    G ++    
Sbjct: 385 WNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTM 444

Query: 384 L-KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGAF-----ADS 436
             + G++        ++ L   AG   R  ++   MP    +S W +++GA       + 
Sbjct: 445 RERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTEL 504

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
             + SE + + LD + +G   N V   N+LA+A  ++
Sbjct: 505 GRIASEKL-FELDPQDSG---NHVLLSNMLASAGRWA 537



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 195/451 (43%), Gaps = 42/451 (9%)

Query: 8   HLQILKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           H   L+ G+   D F+    +++Y + G L  A +LF+EMP+RN ++W  +++     G 
Sbjct: 136 HALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGR 195

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             E  K +  +  AG + N  ++ +   AC   G      G Q H  V+      D  VS
Sbjct: 196 PLETFKAYFGLREAGGMPNVVSVCAFFNACA--GAMFLSLGEQFHGFVVTCGFDMDVSVS 253

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N ++  YG C      AR +F+ +  R+ +SW S+I  Y+Q G       ++   +  G 
Sbjct: 254 NAMVDFYGKC-RCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTG- 311

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
               +P ++   S++T      L G    + + A+  ++ + ++++V SALV  + + G 
Sbjct: 312 ---EEPTDFMVSSVLTTCAG--LLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGG 366

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG-------LVN 299
              A ++F  M ++N+V+ N ++ G     +    L    +FD +    G       LVN
Sbjct: 367 VEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNAL---AVFDAMIRSGGTSPNHITLVN 423

Query: 300 MYAKC---GTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           +   C   G   D   +F     RF +   +  +  ++  L + G  E A   +  ++R 
Sbjct: 424 VITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERA---YEIIQRM 480

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSR 410
            +  S     + L +C   G   LG +I  E L   LD   S ++ LLS + A AG  + 
Sbjct: 481 PMRPSISVWGALLGACKMHGKTELG-RIASEKL-FELDPQDSGNHVLLSNMLASAGRWAE 538

Query: 411 CLKVFFLM--------PEHDQVSWNSVIGAF 433
              V   M        P    ++W +V+  F
Sbjct: 539 ATDVRKEMKNVGIKKEPGCSWITWKNVVHVF 569



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 144/319 (45%), Gaps = 17/319 (5%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           FH  ++  GF  DV + N +++ Y +      A  +FD M  RNSVSW  ++  Y   G 
Sbjct: 237 FHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGA 296

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             +A  ++      G     + + SVL  C   G  G  FG  +H + ++S    +  V+
Sbjct: 297 EEDALAVYMGARNTGEEPTDFMVSSVLTTCA--GLLGLNFGRALHAVAVRSCIDANIFVA 354

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L+ MYG C    D A ++F ++  R+L++WN++I  Y+  GD  +   +F  M R G 
Sbjct: 355 SALVDMYGKCGGVED-AEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSG- 412

Query: 187 RYSLKPNEYTFGSLITAAYSSVLS--GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                PN  T  ++ITA     L+  G  L      M ++ G+       + +V    R 
Sbjct: 413 --GTSPNHITLVNVITACSRGGLTKDGYELFDT---MRERFGVEPRTEHYACVVDLLGRA 467

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LV 298
           G    A +I ++M  +  +S+ G + G  +  GK   G +    LF++    +G    L 
Sbjct: 468 GMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGRIASEKLFELDPQDSGNHVLLS 527

Query: 299 NMYAKCGTIDDSRSVFRFM 317
           NM A  G   ++  V + M
Sbjct: 528 NMLASAGRWAEATDVRKEM 546


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/668 (37%), Positives = 390/668 (58%), Gaps = 12/668 (1%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +G+E+H  + R  L   V V   LV+ YAKCG +DD++ VF  M  +D V+WN+MISG  
Sbjct: 137 EGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFS 196

Query: 334 -QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
              G Y+E       M+ D +  ++ +++  L + A +  +  G++IHG  ++ G   DV
Sbjct: 197 LHEGSYDEVARLLVQMQND-VSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDV 255

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVSEAVKYY---L 448
            V   +L +Y     +    ++F +M    ++V+W++++GA+   +  + EA++ +   L
Sbjct: 256 VVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCD-FMREALELFCQLL 314

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            ++      + VT   ++   ++ +    G  +H   IK     +  + N LLS Y KCG
Sbjct: 315 MLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCG 374

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
            ++   + F  M + RD VS+ ++ISGY+ N    + + +   M   G   +  T A+VL
Sbjct: 375 IINGAMRFFNEM-DLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVL 433

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
            ACA +A L  G   H   +      D +I +AL+DMY+KCG+ID A + FD M  R + 
Sbjct: 434 PACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIV 493

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           SWN+MI  Y  HG G +AL LF  M+ +G  PD VTF+ ++SACSH+GLV EG   F +M
Sbjct: 494 SWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAM 553

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT 748
           +Q +G+IP++E ++CMVDLL RAG   ++  FI KMP+ P+  +W  +L A CR   +  
Sbjct: 554 TQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSA-CRVY-KNV 611

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
           ELG   +  + ++ P++  N+VLL+NMY++ G+W+D A+ R   KE   +K  GCSW+ +
Sbjct: 612 ELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEI 671

Query: 809 KDGVHVFVAGD-ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
              VH F+ G   SHP+   I  KL EL  +M+  GY  ++ +   D+E E KE ++ YH
Sbjct: 672 SGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYVFQDVEEEEKERVLLYH 731

Query: 868 SEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SEK+A+AF +L+ +    I + KNLRVCGDCH+A KFIS +  R+I +RD++RFHHF DG
Sbjct: 732 SEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFISLVTKRDITVRDASRFHHFKDG 791

Query: 927 KCSCGDYW 934
            C+CGD+W
Sbjct: 792 ICNCGDFW 799



 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 243/468 (51%), Gaps = 24/468 (5%)

Query: 274 KGKEVHGYLIR-------SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI--GKDSVS 324
           +GK +H +L++       + L +       LV++Y  C  +  +R VF  M    K+ V 
Sbjct: 27  RGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVFDKMPHRPKNVVL 86

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           WN +I     NG YEEAI  +  M   G+  + F+    L +C++L     G++IH +  
Sbjct: 87  WNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIK 146

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           +L L+S+V VS AL+  YA  G L    +VF  M + D V+WNS+I  F+  E    E  
Sbjct: 147 RLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVA 206

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
           +  + M+    SPN  T + +L A +  +  + G ++H   ++     +  +   +L  Y
Sbjct: 207 RLLVQMQN-DVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVY 265

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR---LDH 561
           GKC  +D   +IF  M   ++EV+W++M+  Y+  + + +A+ L   ++        L  
Sbjct: 266 GKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSA 325

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
            T ATV+  CA++  L  G  +H   +++    D+++G+ L+ MY+KCG I+ A RFF+ 
Sbjct: 326 VTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNE 385

Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH-AGLVDE 680
           M +R+  S+ ++ISGY ++G+ ++ L +F +M+L G  P+  T   VL AC+H AGL   
Sbjct: 386 MDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGL--- 442

Query: 681 GFKHFKSMSQVYGLIPQL--EQFSC--MVDLLGRAGELDKIEEFINKM 724
              H+ S S  Y +I     +   C  ++D+  + G++D   +  ++M
Sbjct: 443 ---HYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRM 487



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 153/572 (26%), Positives = 265/572 (46%), Gaps = 88/572 (15%)

Query: 129 LIAMYGSCLESTDCARRIFEEIETR--DLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           L+ +Y +C E    AR +F+++  R  +++ WN +I  Y+  G       L+ +M     
Sbjct: 57  LVDLYIACSE-LKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKM----L 111

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
            Y + PN +TF  ++ A   S L  +   ++I   +K+  L S++YV +ALV  +A+ G 
Sbjct: 112 GYGITPNRFTFPFVLKAC--SALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGC 169

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG----------------------------------- 271
              A+++F++M +++VV+ N ++ G                                   
Sbjct: 170 LDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPA 229

Query: 272 ------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM-IGKDSVS 324
                  R GKE+HG+ +R G    V VG G++++Y KC  ID +R +F  M I K+ V+
Sbjct: 230 VAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVT 289

Query: 325 WNTMISGLDQNGCYEEAIMNFCA---MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
           W+ M+          EA+  FC    ++ D ++ S  +L + +  CA+L  +  G  +H 
Sbjct: 290 WSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHC 349

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             +K G   D+ V N LLS+YA  G ++  ++ F  M   D VS+ ++I  +  +     
Sbjct: 350 YAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQN-GNSE 408

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           E ++ +L+M+ +G +P   T  ++L A +  +    G   H   I      +T I NAL+
Sbjct: 409 EGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALI 468

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
             Y KCG++D   K+F RM  +R  VSWN+MI  Y  + +  +A+ L   M   G + D 
Sbjct: 469 DMYAKCGKIDTARKVFDRM-HKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDD 527

Query: 562 FTFATVLSACASVATLERG----------------MEVHACGVRACLEFDVVIGSALVDM 605
            TF  ++SAC+    +  G                ME +AC               +VD+
Sbjct: 528 VTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYAC---------------MVDL 572

Query: 606 YSKCGRIDYASRFFDLMPVR-NVYSWNSMISG 636
            S+ G       F + MP+  +V  W +++S 
Sbjct: 573 LSRAGLFKEVHSFIEKMPLEPDVRVWGALLSA 604



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/561 (26%), Positives = 251/561 (44%), Gaps = 64/561 (11%)

Query: 26  LINVYVRVGDLASASKLFDEMPDR--NSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           L+++Y+   +L  A  +FD+MP R  N V W  ++  Y   G   EA  ++ +M+  G  
Sbjct: 57  LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGIT 116

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
            NR+    VL+AC     +    G ++HC + +     +  VS  L+  Y  C    D A
Sbjct: 117 PNRFTFPFVLKACSALKEAS--EGREIHCDIKRLRLESNVYVSTALVDFYAKC-GCLDDA 173

Query: 144 RRIFEEIETRDLISWNSIISVYS-QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           + +F+++  RD+++WNS+IS +S   G    V +L  +MQ +     + PN  T   ++ 
Sbjct: 174 KEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQND-----VSPNSSTIVGVLP 228

Query: 203 AA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQ 259
           A    +S+  G    ++I     + G + D+ VG+ ++  + +     YAR+IF+ M I 
Sbjct: 229 AVAQVNSLRHG----KEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIV 284

Query: 260 KNVVSMNGL--------------------------------------------MEGRRKG 275
           KN V+ + +                                            +     G
Sbjct: 285 KNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTG 344

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
             +H Y I+SG    + VGN L++MYAKCG I+ +   F  M  +D+VS+  +ISG  QN
Sbjct: 345 TCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQN 404

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G  EE +  F  M+  G+     +L S L +CA L  +  G   H   +  G  +D  + 
Sbjct: 405 GNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMIC 464

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           NAL+ +YA  G +    KVF  M +   VSWN++I A+     +  EA+  + +M+  G 
Sbjct: 465 NALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYG-IHGIGLEALLLFDNMQSEGL 523

Query: 456 SPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
            P+ VTFI +++A S   +   G +  +A    + +         ++    + G   +  
Sbjct: 524 KPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVH 583

Query: 515 KIFARMSERRDEVSWNSMISG 535
               +M    D   W +++S 
Sbjct: 584 SFIEKMPLEPDVRVWGALLSA 604



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 153/318 (48%), Gaps = 19/318 (5%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K GF  D+ + NTL+++Y + G +  A + F+EM  R++VS+  I+SGY   G 
Sbjct: 347 LHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGN 406

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           S E  +MF EM  +G    +  L SVL AC     +G  +G   HC  +    T D ++ 
Sbjct: 407 SEEGLRMFLEMQLSGINPEKATLASVLPACAHL--AGLHYGSCSHCYAIICGFTADTMIC 464

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI MY  C    D AR++F+ +  R ++SWN++I  Y   G  +    LF  MQ EG 
Sbjct: 465 NALIDMYAKC-GKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEG- 522

Query: 187 RYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
              LKP++ TF  LI+A   S  V  G Y      AM +  G++  +   + +V   +R 
Sbjct: 523 ---LKPDDVTFICLISACSHSGLVAEGKYWFN---AMTQDFGIIPRMEHYACMVDLLSRA 576

Query: 245 GNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LV 298
           G F       E+M ++ +V     L+   R  K V  G  +   +  +     G    L 
Sbjct: 577 GLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLS 636

Query: 299 NMYAKCGTIDDSRSVFRF 316
           NMY+  G  DD+  V RF
Sbjct: 637 NMYSAVGRWDDAAQV-RF 653



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 135/277 (48%), Gaps = 8/277 (2%)

Query: 469 ASSFSMGKLGHQVHAQVI----KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER- 523
           + S   GKL HQ   + +    + N+ N       L+  Y  C E+     +F +M  R 
Sbjct: 22  SKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVFDKMPHRP 81

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
           ++ V WN +I  Y  N    +A++L + M+  G   + FTF  VL AC+++     G E+
Sbjct: 82  KNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREI 141

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH-GH 642
           H    R  LE +V + +ALVD Y+KCG +D A   FD M  R+V +WNSMISG++ H G 
Sbjct: 142 HCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGS 201

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
            D+   L  QM+ D   P+  T VGVL A +    +  G K         G +  +   +
Sbjct: 202 YDEVARLLVQMQNDVS-PNSSTIVGVLPAVAQVNSLRHG-KEIHGFCVRRGFVGDVVVGT 259

Query: 703 CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
            ++D+ G+   +D      + M I  N + W  ++GA
Sbjct: 260 GILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGA 296



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 110/480 (22%), Positives = 205/480 (42%), Gaps = 58/480 (12%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           + + +  H  I +     +V++   L++ Y + G L  A ++FD+M  R+ V+W  ++SG
Sbjct: 135 ASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISG 194

Query: 61  YT-HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           ++ H+G  +E  ++  +M +     N   +  VL A  +   +  + G ++H   ++   
Sbjct: 195 FSLHEGSYDEVARLLVQM-QNDVSPNSSTIVGVLPAVAQV--NSLRHGKEIHGFCVRRGF 251

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIE-TRDLISWNSIISVYSQRGDTISVFKLF 178
             D +V   ++ +YG C +  D ARRIF+ +   ++ ++W++++  Y          +LF
Sbjct: 252 VGDVVVGTGILDVYGKC-QCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELF 310

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVGS 235
            ++        LK +     ++  A    V +    L     +     K+G + DL VG+
Sbjct: 311 CQL------LMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGN 364

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK--------------------- 274
            L+S +A+ G    A + F +M  ++ VS   ++ G  +                     
Sbjct: 365 TLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINP 424

Query: 275 --------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                               G   H Y I  G      + N L++MYAKCG ID +R VF
Sbjct: 425 EKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVF 484

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             M  +  VSWNTMI     +G   EA++ F  M+ +GL   + + I  +S+C+  G + 
Sbjct: 485 DRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVA 544

Query: 375 LGQQ-IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            G+   +      G+   +     ++ L + AG           MP E D   W +++ A
Sbjct: 545 EGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSA 604


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/706 (35%), Positives = 418/706 (59%), Gaps = 28/706 (3%)

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
            R+ + YY   + ++ I +N+ +         + + +HG+++++G  + + V   LVN+Y
Sbjct: 60  TRIESSYYF-PLLQECIDRNLAT---------EARMIHGHIVKTGFHEDLFVMTFLVNVY 109

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
           +KCG ++ +  VF  +  ++  +W T+++G  QN     A+  F  M   G   SN++L 
Sbjct: 110 SKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLG 169

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
             L++C+SL  I  G+Q+H   +K  +D D S+ N+L S Y+    L   +K F ++ E 
Sbjct: 170 IVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEK 229

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D +SW SVI +  D+    + ++ +++DM   G  PN  T  ++L+A        LG Q+
Sbjct: 230 DVISWTSVISSCCDN-GQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQI 288

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H+  IK    +   I+N+++  Y KCG + + +K+F  M E  + V+WN+MI+G+     
Sbjct: 289 HSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGM-ETLNLVTWNAMIAGHAKMMD 347

Query: 542 LPK-----------AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           L +           A+ +   + + G + D FTF++VLS C+++  LE+G ++H   +++
Sbjct: 348 LAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKS 407

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
            +  DVV+G+ALV MY+KCG ID AS+ F  MP R + SW SMI+G+ARHG   +AL LF
Sbjct: 408 GVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLF 467

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
             M+L G  P+ VTFVGVLSACSHAGL DE   +F+ M + Y + P ++ F+C++D+  R
Sbjct: 468 EDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLR 527

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
            G +++  + ++KM   PN  IW ++L A CR++  K++LG  AA  L +++P++   YV
Sbjct: 528 LGRVEEAFDVVHKMNFEPNETIW-SMLIAGCRSH-GKSDLGFYAAEQLLKLKPKDVETYV 585

Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
            L NM+ S G+W+DV+K RK MKE +V K    SW+++K+ V+ F   D+SH +   +Y+
Sbjct: 586 SLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYK 645

Query: 831 KLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVS--YHSEKIAVAF-VLTRNSKLPIRI 887
            L+ +  +++  GY P     + + E   +  L S   HSEK+A+AF +L   +  PIR+
Sbjct: 646 LLETVLNEVKALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRV 705

Query: 888 MKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
           +K++ +C DCH+  +FIS + GREIV+RDS + H F +G CSCG Y
Sbjct: 706 VKSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 751



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 203/423 (47%), Gaps = 61/423 (14%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           + +A++ H  I+K GF  D+F+   L+NVY + G + SA K+FD +P RN  +W  +++G
Sbjct: 80  ATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTG 139

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y        A ++F +M+ AG   + Y LG VL AC        +FG QVH  ++K +  
Sbjct: 140 YVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL--QSIEFGKQVHAYLIKYHID 197

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
           FD  + N L + Y S     + A + F+ I+ +D+ISW S+IS     G        F  
Sbjct: 198 FDTSIGNSLSSFY-SKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMD 256

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M  +G    +KPNEYT  S+++A    V+    L  QI ++  K G  S + + ++++  
Sbjct: 257 MLSDG----MKPNEYTLTSVLSAC--CVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYL 310

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------- 274
           + + G    A+K+FE M   N+V+ N ++ G  K                          
Sbjct: 311 YLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLY 370

Query: 275 --------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
                                     G+++HG +I+SG+   V VG  LV+MY KCG+ID
Sbjct: 371 RSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSID 430

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
            +   F  M  +  +SW +MI+G  ++G  ++A+  F  MR  G+  +  + +  LS+C+
Sbjct: 431 KASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACS 490

Query: 369 SLG 371
             G
Sbjct: 491 HAG 493



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 12/191 (6%)

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G R++   +  +L  C           +H   V+     D+ + + LV++YSKCG ++ A
Sbjct: 59  GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 118

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
            + FD +P RNV +W ++++GY ++ H   AL LF +M   G  P + T   VL+ACS  
Sbjct: 119 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 178

Query: 676 GLVDEGFKHFKSMSQVYG-LIPQLEQFSCMV--DLLGRAGELDKIEEFINKMPIT--PNS 730
             ++ G        QV+  LI     F   +   L     +  ++E  I    I    + 
Sbjct: 179 QSIEFG-------KQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDV 231

Query: 731 LIWRTVLGACC 741
           + W +V+ +CC
Sbjct: 232 ISWTSVISSCC 242


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 299/888 (33%), Positives = 465/888 (52%), Gaps = 79/888 (8%)

Query: 104 FKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS 163
              G +VH  + KS       + ++L+ MY  C    D A+  F+ +  +D ++W  +I 
Sbjct: 14  LDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLID-AKACFDRMPVQDALTWARLIR 72

Query: 164 VYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILA 220
            + Q GD+     LF  MQ EG    + P    F +++ A  +       LL++   I  
Sbjct: 73  AHGQIGDSEQALHLFRSMQLEG----VAPVNRNFVAVLGACSAD----PELLEEGRRIHG 124

Query: 221 MVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG------------- 267
           +++   + SD YV + L+  + +  +   ARK+F+ +  K VV  N              
Sbjct: 125 VLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQ 184

Query: 268 --------LMEG----------------RRKGKEV------------HGYLIRSGLFDMV 291
                   L+EG                + K  EV            H +L  S      
Sbjct: 185 AIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF---- 240

Query: 292 AVGNGLVNMYAKCGTIDDS-RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
                LVN Y  CG ++ + R+  R  +  + +    MI+   Q   ++EA+  F  M  
Sbjct: 241 --ATALVNFYGSCGDLEQAFRAFSRHRL--ELILATAMITQYTQRERWDEALELFKVMLL 296

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
           +G+     + ++ L++C+    +  G+ IHG   ++  D  V+  NAL+++Y   G L  
Sbjct: 297 EGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEE 356

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA-AA 469
            ++VF  M   D +SWN++I A     +   EA+     M+  G   + ++F+N L   A
Sbjct: 357 AVEVFRSMQHRDVISWNTIIAAHG-QHSQHPEALHLLHLMQLDGVKADKISFVNALPLCA 415

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
           +S ++ K G  +H+ +++  +  +  ++NA+L  YG C   DD  ++F R  + RD+VSW
Sbjct: 416 ASEALAK-GRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVF-RAMKARDQVSW 473

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQ-RGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           N+MI+ Y     L     L++  MQ  G   D  +F   LSACA+ A+L  G  +H    
Sbjct: 474 NAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIR 533

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
              LE ++ + +A+++MY+K G +  A + F  MP+ +V SWN MIS +A+HGH D+ L 
Sbjct: 534 ETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLR 593

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI-PQLEQFSCMVDL 707
            F +M  +G LP+ VTFV V+SACSH GLV +G + F S+   +  I P+ E + CMVDL
Sbjct: 594 FFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDL 653

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAV 767
           + RAG+LD  E+FI   P+ P+ +I  T+LGA      +  E  RK+A  L E+ P  + 
Sbjct: 654 IARAGKLDAAEKFIAAAPLKPDRVIHSTMLGAS--KVHKDVERARKSAEHLMELTPDRSA 711

Query: 768 NYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDL 827
            YV+L+N+Y   GK ++ AK R+ M E  ++KE   S + +K  VH F  GD ++     
Sbjct: 712 AYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPE 771

Query: 828 IYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIR 886
           I E+L+ L+ +M  AGY P T   L D+  E K+ L+SYHSEK+A+AF L   +    +R
Sbjct: 772 ILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLR 831

Query: 887 IMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           I+KNLRVCGDCH+A KFISKI GREIV+RDS+RFHHF++G CSCGDYW
Sbjct: 832 IIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 193/727 (26%), Positives = 344/727 (47%), Gaps = 61/727 (8%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H +I K       F+ + L+ +YV  G L  A   FD MP +++++WA ++  +   
Sbjct: 18  KEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHGQI 77

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G S +A  +F+ M   G         +VL AC    P   + G ++H ++  +    D  
Sbjct: 78  GDSEQALHLFRSMQLEGVAPVNRNFVAVLGACS-ADPELLEEGRRIHGVLRGTAMESDHY 136

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           VS  L+ MYG C  S + AR++F+ I  + ++ WN++I+ Y+Q+       ++F  M  E
Sbjct: 137 VSTTLLHMYGKC-SSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLE 195

Query: 185 GFR------------------------YSLKPNEYTFGSLITAAYSSVLSGSY----LLQ 216
           G +                          L   E     L  +++++ L   Y     L+
Sbjct: 196 GVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLE 255

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV--------VSMNGL 268
           Q      +  L  +L + +A+++ + +   +  A ++F+ M+ + V          +N  
Sbjct: 256 QAFRAFSRHRL--ELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNAC 313

Query: 269 --MEGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
               G  +G+ +HG++ R   FD  V  GN L+NMY KCG+++++  VFR M  +D +SW
Sbjct: 314 SGPRGLEEGRMIHGFM-REIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISW 372

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           NT+I+   Q+  + EA+     M+ DG+ +   S ++ L  CA+   +  G+ IH   ++
Sbjct: 373 NTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVE 432

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G+ +DV + NA+L +Y          +VF  M   DQVSWN++I A+A    L SEA+ 
Sbjct: 433 SGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALL 492

Query: 446 YYLDMRRAGWSPNGVTFI---NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
            +  M+  G+ P+ ++F+   +  AA +S + GKL   +H ++ +  + +  T+ NA+L+
Sbjct: 493 LFQQMQLHGFMPDVISFVAALSACAAQASLAEGKL---LHDRIRETGLESNMTVANAVLN 549

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            Y K G +    K+F +M    D +SWN MIS +  +    + +     M   G+  +  
Sbjct: 550 MYAKSGSLVLARKMFGKMP-LPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDV 608

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA-----LVDMYSKCGRIDYASR 617
           TF +V+SAC+    ++ G+++    V    +F  +   A     +VD+ ++ G++D A +
Sbjct: 609 TFVSVVSACSHGGLVKDGVQLF---VSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEK 665

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC-SHAG 676
           F    P++     +S + G ++  H D      S   L    PD      VLS      G
Sbjct: 666 FIAAAPLKPDRVIHSTMLGASK-VHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVG 724

Query: 677 LVDEGFK 683
             DEG K
Sbjct: 725 KKDEGAK 731



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 1/119 (0%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +A +L   A   +L+ G EVHA   ++ ++    +G  LV MY  CG +  A   FD MP
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-HAGLVDEG 681
           V++  +W  +I  + + G  ++AL LF  M+L+G  P +  FV VL ACS    L++EG
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEG 119



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 52/98 (53%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + KL H +I + G   ++ + N ++N+Y + G L  A K+F +MP  + +SW  ++S + 
Sbjct: 524 EGKLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFA 583

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
             G +++  + F+ M   G L N     SV+ AC   G
Sbjct: 584 QHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGG 621


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/650 (39%), Positives = 381/650 (58%), Gaps = 16/650 (2%)

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           N L+N YAK   I  +R VF  +   D VS+NT+I+     G     +  F  +R   L 
Sbjct: 79  NTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLG 138

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
              F+L   +++C     + L +Q+H   +  G D   SV+NA+L+ Y+  G+LS   +V
Sbjct: 139 LDGFTLSGVITACGDD--VGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRV 196

Query: 415 FFLMPE---HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
           F  M E    D+VSWN++I A       + EAV  + +M R G   +  T  ++L A + 
Sbjct: 197 FREMGEGGGRDEVSWNAMIVACGQHREGM-EAVGLFREMVRRGLKVDMFTMASVLTAFTC 255

Query: 472 FSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC-GEMDDCEKIFARMSERRDEVSWN 530
                 G Q H  +IK      + + + L+  Y KC G M +C K+F  ++   D V WN
Sbjct: 256 VKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAP-DLVLWN 314

Query: 531 SMISGY-IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
           +MISG+ ++ +L    +     M + G R D  +F  V SAC+++++   G +VHA  ++
Sbjct: 315 TMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIK 374

Query: 590 ACLEFD-VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
           + + ++ V + +ALV MYSKCG +  A R FD MP  N  S NSMI+GYA+HG   ++L 
Sbjct: 375 SDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLR 434

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           LF  M      P+ +TF+ VLSAC H G V+EG K+F  M + + + P+ E +SCM+DLL
Sbjct: 435 LFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLL 494

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
           GRAG+L + E  I  MP  P S+ W T+LGAC +      EL  KAAN    +EP NA  
Sbjct: 495 GRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHG--NVELAVKAANEFLRLEPYNAAP 552

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
           YV+L+NMYAS  +WE+ A  ++ M+E  VKK+ GCSW+ +   VHVFVA D SHP    I
Sbjct: 553 YVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEI 612

Query: 829 YEKLKELNQKMRDAGYVPQTKFALF---DLEPESKEDLVSYHSEKIAVAF-VLTRNSKLP 884
           +  + ++ +KM+ AGYVP  ++AL    ++EP+ +E  + YHSEK+AVAF +++    +P
Sbjct: 613 HVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFGLISTEEGVP 672

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           I ++KNLR+CGDCH+A K IS + GREI +RD++RFH F +G CSC DYW
Sbjct: 673 ILVVKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHCSCRDYW 722



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 223/479 (46%), Gaps = 73/479 (15%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           FHL    + F+Y     NTLIN Y +   +  A ++FDE+P  + VS+  +++ Y  +G 
Sbjct: 67  FHLTQYPNVFSY-----NTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGE 121

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGM--QVHCLVLKSNQTFDGL 124
                ++F+E+      L+ + L  V+ AC      G   G+  Q+HC V+         
Sbjct: 122 CGPTLRLFEEVRELRLGLDGFTLSGVITAC------GDDVGLVRQLHCFVVVCGHDCYAS 175

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIET---RDLISWNSIISVYSQRGDTISVFKLFSRM 181
           V+N ++A Y      ++ ARR+F E+     RD +SWN++I    Q  + +    LF  M
Sbjct: 176 VNNAVLACYSRKGFLSE-ARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREM 234

Query: 182 QREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            R G    LK + +T  S++TA      ++ G    +Q   M+ K+G   + +VGS L+ 
Sbjct: 235 VRRG----LKVDMFTMASVLTAFTCVKDLVGG----RQFHGMMIKSGFHGNSHVGSGLID 286

Query: 240 GFARL-GNFYYARKIFEQMIQKNVVSMNGLMEG------------------RRK------ 274
            +++  G+    RK+FE++   ++V  N ++ G                  +R       
Sbjct: 287 LYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDD 346

Query: 275 ------------------GKEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                             GK+VH   I+S + ++ V+V N LV MY+KCG + D+R VF 
Sbjct: 347 CSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFD 406

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M   ++VS N+MI+G  Q+G   E++  F  M    +  ++ + I+ LS+C   G +  
Sbjct: 407 TMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEE 466

Query: 376 GQQ-IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           GQ+  +    +  ++ +    + ++ L   AG L    ++   MP     + W +++GA
Sbjct: 467 GQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGA 525



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 221/470 (47%), Gaps = 51/470 (10%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPD---RNSVSW-ACIVSGYTHK-GMSNEACKMFKEMV 78
           N ++  Y R G L+ A ++F EM +   R+ VSW A IV+   H+ GM  EA  +F+EMV
Sbjct: 178 NAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGM--EAVGLFREMV 235

Query: 79  RAGFLLNRYALGSVLRA--CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
           R G  ++ + + SVL A  C +        G Q H +++KS    +  V + LI +Y  C
Sbjct: 236 RRGLKVDMFTMASVLTAFTCVK----DLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKC 291

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGD-TISVFKLFSRMQREGFRYSLKPNEY 195
             S    R++FEEI   DL+ WN++IS +S   D +      F  MQR GFR    P++ 
Sbjct: 292 AGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFR----PDDC 347

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGL-LSDLYVGSALVSGFARLGNFYYARKIF 254
           +F  + +A   S LS   L +Q+ A+  K+ +  + + V +ALV+ +++ GN + AR++F
Sbjct: 348 SFVCVTSAC--SNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVF 405

Query: 255 EQMIQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNGL--VNMYAKC---GTID 308
           + M + N VS+N ++ G  + G EV    +   + +     N +  + + + C   G ++
Sbjct: 406 DTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVE 465

Query: 309 DSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           + +  F     RF I  ++  ++ MI  L + G  +EA      M        +    + 
Sbjct: 466 EGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETM---PFNPGSIEWATL 522

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH-- 421
           L +C   G + L  +   E L+L    + +    L ++YA A        V  LM E   
Sbjct: 523 LGACRKHGNVELAVKAANEFLRLE-PYNAAPYVMLSNMYASAARWEEAATVKRLMRERGV 581

Query: 422 ---DQVSWNSV-----IGAFADSEALVSEAVKYYL-----DMRRAGWSPN 458
                 SW  +     +    D+   + + +  Y+      M++AG+ P+
Sbjct: 582 KKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPD 631



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 130/314 (41%), Gaps = 44/314 (14%)

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           TF N+L A  +      G  +HA   K  +   T + N     Y KCG + + +  F  +
Sbjct: 11  TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSF-HL 69

Query: 521 SERRDEVSWNSMISGYIHNELLPKAM---------------NLVWFMMQRGQ-------- 557
           ++  +  S+N++I+ Y  + L+  A                 L+     RG+        
Sbjct: 70  TQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLF 129

Query: 558 --------RLDHFTFATVLSACASVATLERGMEVHACGVRAC-LEFDVVIGSALVDMYSK 608
                    LD FT + V++AC     L R +    C V  C  +    + +A++  YS+
Sbjct: 130 EEVRELRLGLDGFTLSGVITACGDDVGLVRQLH---CFVVVCGHDCYASVNNAVLACYSR 186

Query: 609 CGRIDYASRFFDLMPV---RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
            G +  A R F  M     R+  SWN+MI    +H  G +A+ LF +M   G   D  T 
Sbjct: 187 KGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTM 246

Query: 666 VGVLSACSHA-GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR-AGELDKIEEFINK 723
             VL+A +    LV  G + F  M    G        S ++DL  + AG + +  +   +
Sbjct: 247 ASVLTAFTCVKDLV--GGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEE 304

Query: 724 MPITPNSLIWRTVL 737
           +   P+ ++W T++
Sbjct: 305 I-TAPDLVLWNTMI 317



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 1/98 (1%)

Query: 4   AKLFHLQILKHGFAYD-VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
            K  H   +K    Y+ V + N L+ +Y + G++  A ++FD MP+ N+VS   +++GY 
Sbjct: 365 GKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYA 424

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
             G+  E+ ++F+ M+      N     +VL AC   G
Sbjct: 425 QHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTG 462


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 262/684 (38%), Positives = 387/684 (56%), Gaps = 49/684 (7%)

Query: 259 QKNVVSMNGLMEGRRK---GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
           Q   +  N L +   K    K +H  L+ +G    + +   LVN+YA  G +  SR  F 
Sbjct: 16  QNEEIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFD 75

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF-SLISTLSSCASLGWIM 374
            +  KD  +WN+MIS    NG + EAI  F  +     +  +F +    L +C +L   +
Sbjct: 76  QIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTL---V 132

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
            G++IH    KLG   +V V+ +L+ +Y+  G+      +F  MP  D  SWN++I    
Sbjct: 133 DGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLI 192

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANET 494
            +    ++A+    +MR  G   N VT ++IL                            
Sbjct: 193 QN-GNAAQALDVLDEMRLEGIKMNFVTVVSILPV-------------------------- 225

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
                 +  Y K G +D   K+F  +   +D +SWN++I+GY  N L  +A+  V+ MM+
Sbjct: 226 -----FVDMYAKLGLLDSAHKVF-EIIPVKDVISWNTLITGYAQNGLASEAIE-VYKMME 278

Query: 555 RGQRL--DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRI 612
             + +  +  T+ ++L A A V  L++GM++H   ++  L  DV + + L+D+Y KCGR+
Sbjct: 279 ECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRL 338

Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
             A   F  +P  +  +WN++IS +  HGH +K L LF +M  +G  PDHVTFV +LSAC
Sbjct: 339 VDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSAC 398

Query: 673 SHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI 732
           SH+G V+EG   F+ M Q YG+ P L+ + CMVDLLGRAG L+   +FI  MP+ P++ I
Sbjct: 399 SHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASI 457

Query: 733 WRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKA 791
           W  +LGAC    N    ELG+ A++ LFE++ +N   YVLL+N+YA+ GKWE V K R  
Sbjct: 458 WGALLGACRIHGN---IELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSL 514

Query: 792 MKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFA 851
            +E  +KK  G S + +   V VF  G++SHP+   IYE+L+ L  KM+  GY+P   F 
Sbjct: 515 ARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFV 574

Query: 852 LFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGR 910
           L D+E + KE +++ HSE++A+AF +++   K PIRI KNLRVCGDCH+A KFIS+I  R
Sbjct: 575 LQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQR 634

Query: 911 EIVLRDSNRFHHFNDGKCSCGDYW 934
           EIV+RDSNRFHHF DG CSCGDYW
Sbjct: 635 EIVVRDSNRFHHFKDGICSCGDYW 658



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 210/468 (44%), Gaps = 82/468 (17%)

Query: 220 AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----- 274
           A++  AG +  +++ + LV+ +A LG+   +R  F+Q+ QK+V + N ++          
Sbjct: 40  ALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFH 99

Query: 275 ----------------------------------GKEVHGYLIRSGLFDMVAVGNGLVNM 300
                                             G+++H +  + G    V V   L++M
Sbjct: 100 EAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHM 159

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           Y++ G    +RS+F  M  +D  SWN MISGL QNG   +A+     MR           
Sbjct: 160 YSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL---------- 209

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
                                EG+K+   + VS+    + +YA  G L    KVF ++P 
Sbjct: 210 ---------------------EGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPV 248

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG-WSPNGVTFINILAAASSFSMGKLGH 479
            D +SWN++I  +A +  L SEA++ Y  M       PN  T+++IL A +     + G 
Sbjct: 249 KDVISWNTLITGYAQN-GLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGM 307

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           ++H +VIK N+  +  +   L+  YGKCG + D   +F ++ +    V+WN++IS +  +
Sbjct: 308 KIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ-ESSVTWNAIISCHGIH 366

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME----VHACGVRACLEFD 595
               K + L   M+  G + DH TF ++LSAC+    +E G      +   G++  L+  
Sbjct: 367 GHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKH- 425

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYARHGH 642
                 +VD+  + G ++ A  F   MP++   S W +++     HG+
Sbjct: 426 ---YGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGN 470



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 214/451 (47%), Gaps = 43/451 (9%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  ++  G    +F+   L+N+Y  +GD++ +   FD++P ++  +W  ++S Y H
Sbjct: 35  AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94

Query: 64  KGMSNEACKMFKEM-----VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
            G  +EA   F ++     +R  F    Y    VL+AC          G ++HC   K  
Sbjct: 95  NGHFHEAIGCFYQLLLVSEIRPDF----YTFPPVLKAC-----GTLVDGRKIHCWAFKLG 145

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
             ++  V+  LI MY S    T  AR +F+++  RD+ SWN++IS   Q G+      + 
Sbjct: 146 FQWNVFVAASLIHMY-SRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 204

Query: 179 SRMQREGFRYSLKPNEYTFGSLITA-----AYSSVLSGSYLLQQILAMVKKAGLLSDLYV 233
             M+ EG    +K N  T  S++       A   +L  ++ + +I+        + D+  
Sbjct: 205 DEMRLEG----IKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIP-------VKDVIS 253

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQ-KNVVSMNGL----------MEGRRKGKEVHGYL 282
            + L++G+A+ G    A ++++ M + K ++   G           +   ++G ++HG +
Sbjct: 254 WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRV 313

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
           I++ L   V V   L+++Y KCG + D+ S+F  +  + SV+WN +IS    +G  E+ +
Sbjct: 314 IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTL 373

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
             F  M  +G+   + + +S LS+C+  G++  G+       + G+   +     ++ L 
Sbjct: 374 KLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLL 433

Query: 403 ADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
             AGYL         MP + D   W +++GA
Sbjct: 434 GRAGYLEMAYDFIKDMPLQPDASIWGALLGA 464



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 147/327 (44%), Gaps = 57/327 (17%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D +  H    K GF ++VF+  +LI++Y R G    A  LFD+MP R+  SW  ++SG  
Sbjct: 133 DGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLI 192

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G + +A  +  EM   G  +N   + S+L                             
Sbjct: 193 QNGNAAQALDVLDEMRLEGIKMNFVTVVSILP---------------------------- 224

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG---DTISVFKLFS 179
                V + MY   L   D A ++FE I  +D+ISWN++I+ Y+Q G   + I V+K+  
Sbjct: 225 -----VFVDMYAK-LGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMME 278

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVGSA 236
             +       + PN+ T+ S++  AY+ V +    LQQ   I   V K  L  D++V + 
Sbjct: 279 ECKE------IIPNQGTWVSIL-PAYAHVGA----LQQGMKIHGRVIKTNLHLDVFVATC 327

Query: 237 LVSGFARLGNFYYARKIFEQMIQKN------VVSMNGLMEGRRKGKEVHGYLIRSGLFDM 290
           L+  + + G    A  +F Q+ Q++      ++S +G+     K  ++ G ++  G+   
Sbjct: 328 LIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPD 387

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                 L++  +  G +++ +  FR M
Sbjct: 388 HVTFVSLLSACSHSGFVEEGKWCFRLM 414


>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
 gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
 gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 721

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 271/730 (37%), Positives = 412/730 (56%), Gaps = 47/730 (6%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG 275
           + + A+  K+ + S  Y+ +  V+ +++ G   YAR  F    + NV S N +       
Sbjct: 28  KSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVI------- 80

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
                                 V  YAK   I  +R +F  +   D+VS+NT+ISG    
Sbjct: 81  ----------------------VKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADA 118

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
                A++ F  MR+ G     F+L   +++C     + L +Q+H   +  G DS  SV+
Sbjct: 119 RETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDR--VDLIKQLHCFSVSGGFDSYSSVN 176

Query: 396 NALLSLYADAGYLSRCLKVFFLMPE-HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           NA ++ Y+  G L   + VF+ M E  D+VSWNS+I A+   +   ++A+  Y +M   G
Sbjct: 177 NAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKE-GAKALALYKEMIFKG 235

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD--- 511
           +  +  T  ++L A +S      G Q H ++IK      + + + L+  Y KCG  D   
Sbjct: 236 FKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMY 295

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR-GQRLDHFTFATVLSA 570
           D EK+F  +    D V WN+MISGY  NE L +     +  MQR G R D  +F  V SA
Sbjct: 296 DSEKVFQEILSP-DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSA 354

Query: 571 CASVATLERGMEVHACGVRACLEFD-VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           C+++++  +  ++H   +++ +  + + + +AL+ +Y K G +  A   FD MP  N  S
Sbjct: 355 CSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS 414

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           +N MI GYA+HGHG +AL L+ +M   G  P+ +TFV VLSAC+H G VDEG ++F +M 
Sbjct: 415 FNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMK 474

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
           + + + P+ E +SCM+DLLGRAG+L++ E FI+ MP  P S+ W  +LGAC +   +   
Sbjct: 475 ETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH--KNMA 532

Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMK 809
           L  +AAN L  M+P  A  YV+LANMYA   KWE++A  RK+M+   ++K+ GCSW+ +K
Sbjct: 533 LAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVK 592

Query: 810 DGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDL---VSY 866
              HVFVA D SHP    + E L+E+ +KM+  GYV   K+A+   +   + D    + +
Sbjct: 593 KKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGH 652

Query: 867 HSEKIAVAFVL--TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFN 924
           HSEK+AVAF L  TR+ +  + ++KNLR+CGDCH+A KF+S + GREI++RD+ RFH F 
Sbjct: 653 HSEKLAVAFGLMSTRDGE-ELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFK 711

Query: 925 DGKCSCGDYW 934
           DGKCSCGDYW
Sbjct: 712 DGKCSCGDYW 721



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 120/503 (23%), Positives = 223/503 (44%), Gaps = 65/503 (12%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +VF  N ++  Y +   +  A +LFDE+P  ++VS+  ++SGY     +  A  +FK M 
Sbjct: 73  NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           + GF ++ + L  ++ AC +          Q+HC  +         V+N  +  Y     
Sbjct: 133 KLGFEVDGFTLSGLIAACCD----RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             +     +   E RD +SWNS+I  Y Q  +      L+  M  +GF+  +    +T  
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDM----FTLA 244

Query: 199 SLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN---FYYARKI 253
           S++ A  S   ++ G    +Q    + KAG   + +VGS L+  +++ G     Y + K+
Sbjct: 245 SVLNALTSLDHLIGG----RQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKV 300

Query: 254 FEQMIQKNVVSMNGLMEG------------------RRKG-------------------- 275
           F++++  ++V  N ++ G                  +R G                    
Sbjct: 301 FQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSS 360

Query: 276 ----KEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
               K++HG  I+S +  + ++V N L+++Y K G + D+R VF  M   ++VS+N MI 
Sbjct: 361 PSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIK 420

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IHGEGLKLGLD 389
           G  Q+G   EA++ +  M   G+  +  + ++ LS+CA  G +  GQ+  +       ++
Sbjct: 421 GYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIE 480

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSE--ALVSEAVKY 446
            +    + ++ L   AG L    +    MP +   V+W +++GA    +  AL   A   
Sbjct: 481 PEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANE 540

Query: 447 YLDMRRAGWSPNGVTFINILAAA 469
            + M+    +P  V   N+ A A
Sbjct: 541 LMVMQPLAATPY-VMLANMYADA 562



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 52/92 (56%)

Query: 9   LQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSN 68
           L I  H  +  + + N LI++Y + G+L  A  +FD MP+ N+VS+ C++ GY   G   
Sbjct: 370 LAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGT 429

Query: 69  EACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           EA  +++ M+ +G   N+    +VL AC  CG
Sbjct: 430 EALLLYQRMLDSGIAPNKITFVAVLSACAHCG 461



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           TF  +L    +   L  G  +HA  V++ +     + +  V++YSKCGR+ YA   F   
Sbjct: 10  TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
              NV+S+N ++  YA+      A  LF ++    P PD V++  ++S  + A       
Sbjct: 70  EEPNVFSYNVIVKAYAKDSKIHIARQLFDEI----PQPDTVSYNTLISGYADARETFAAM 125

Query: 683 KHFKSMSQV 691
             FK M ++
Sbjct: 126 VLFKRMRKL 134


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/706 (35%), Positives = 418/706 (59%), Gaps = 28/706 (3%)

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
            R+ + YY   + ++ I +N+ +         + + +HG+++++G  + + V   LVN+Y
Sbjct: 54  TRIESSYYF-PLLQECIDRNLAT---------EARMIHGHIVKTGFHEDLFVMTFLVNVY 103

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
           +KCG ++ +  VF  +  ++  +W T+++G  QN     A+  F  M   G   SN++L 
Sbjct: 104 SKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLG 163

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
             L++C+SL  I  G+Q+H   +K  +D D S+ N+L S Y+    L   +K F ++ E 
Sbjct: 164 IVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEK 223

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D +SW SVI +  D+    + ++ +++DM   G  PN  T  ++L+A        LG Q+
Sbjct: 224 DVISWTSVISSCCDN-GQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQI 282

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H+  IK    +   I+N+++  Y KCG + + +K+F  M E  + V+WN+MI+G+     
Sbjct: 283 HSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGM-ETLNLVTWNAMIAGHAKMMD 341

Query: 542 LPK-----------AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           L +           A+ +   + + G + D FTF++VLS C+++  LE+G ++H   +++
Sbjct: 342 LAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKS 401

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
            +  DVV+G+ALV MY+KCG ID AS+ F  MP R + SW SMI+G+ARHG   +AL LF
Sbjct: 402 GVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLF 461

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
             M+L G  P+ VTFVGVLSACSHAGL DE   +F+ M + Y + P ++ F+C++D+  R
Sbjct: 462 EDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLR 521

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
            G +++  + ++KM   PN  IW ++L A CR++  K++LG  AA  L +++P++   YV
Sbjct: 522 LGRVEEAFDVVHKMNFEPNETIW-SMLIAGCRSH-GKSDLGFYAAEQLLKLKPKDVETYV 579

Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
            L NM+ S G+W+DV+K RK MKE +V K    SW+++K+ V+ F   D+SH +   +Y+
Sbjct: 580 SLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYK 639

Query: 831 KLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVS--YHSEKIAVAF-VLTRNSKLPIRI 887
            L+ +  +++  GY P     + + E   +  L S   HSEK+A+AF +L   +  PIR+
Sbjct: 640 LLETVLNEVKALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRV 699

Query: 888 MKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
           +K++ +C DCH+  +FIS + GREIV+RDS + H F +G CSCG Y
Sbjct: 700 VKSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 745



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 203/423 (47%), Gaps = 61/423 (14%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           + +A++ H  I+K GF  D+F+   L+NVY + G + SA K+FD +P RN  +W  +++G
Sbjct: 74  ATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTG 133

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y        A ++F +M+ AG   + Y LG VL AC        +FG QVH  ++K +  
Sbjct: 134 YVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL--QSIEFGKQVHAYLIKYHID 191

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
           FD  + N L + Y S     + A + F+ I+ +D+ISW S+IS     G        F  
Sbjct: 192 FDTSIGNSLSSFY-SKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMD 250

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M  +G    +KPNEYT  S+++A    V+    L  QI ++  K G  S + + ++++  
Sbjct: 251 MLSDG----MKPNEYTLTSVLSAC--CVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYL 304

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------- 274
           + + G    A+K+FE M   N+V+ N ++ G  K                          
Sbjct: 305 YLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLY 364

Query: 275 --------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
                                     G+++HG +I+SG+   V VG  LV+MY KCG+ID
Sbjct: 365 RSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSID 424

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
            +   F  M  +  +SW +MI+G  ++G  ++A+  F  MR  G+  +  + +  LS+C+
Sbjct: 425 KASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACS 484

Query: 369 SLG 371
             G
Sbjct: 485 HAG 487



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 12/191 (6%)

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G R++   +  +L  C           +H   V+     D+ + + LV++YSKCG ++ A
Sbjct: 53  GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 112

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
            + FD +P RNV +W ++++GY ++ H   AL LF +M   G  P + T   VL+ACS  
Sbjct: 113 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 172

Query: 676 GLVDEGFKHFKSMSQVYG-LIPQLEQFSCMV--DLLGRAGELDKIEEFINKMPIT--PNS 730
             ++ G        QV+  LI     F   +   L     +  ++E  I    I    + 
Sbjct: 173 QSIEFG-------KQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDV 225

Query: 731 LIWRTVLGACC 741
           + W +V+ +CC
Sbjct: 226 ISWTSVISSCC 236


>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/661 (39%), Positives = 381/661 (57%), Gaps = 39/661 (5%)

Query: 276  KEVHGYL-IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            K++H  + I   L    ++G  L+  YA CG    +R +F  +  K+ V +N MI     
Sbjct: 1044 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 1103

Query: 335  NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            N  Y +A++ F  M   G+   +++    L + +    + +G QIH   +++GLD +V V
Sbjct: 1104 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFV 1163

Query: 395  SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             N L+S+Y   G L    +V   MP  D VSWNS++   A       +A++   +M   G
Sbjct: 1164 GNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCA-RNGQFDDALEVCKEMELLG 1222

Query: 455  WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
              P+  T  ++L A ++                      T ++N               +
Sbjct: 1223 LKPDAGTMASLLPAVTN----------------------TCLDNVSF-----------VK 1249

Query: 515  KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
            ++F +++  +  VSWN MI+ Y++N +  +A+++   M       D  + A+VL AC  +
Sbjct: 1250 EMFMKLA-NKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDL 1308

Query: 575  ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
            + L  G  +H   VR  L+ ++++ +AL+DMY+KCG ++YA   FD M  R+V SW SMI
Sbjct: 1309 SALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMI 1368

Query: 635  SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
            S Y  +G G  A++LFS+M+  G  PD + FV VLSACSHAGL+DEG  +FK M++   +
Sbjct: 1369 SAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKI 1428

Query: 695  IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
            +P++E F CMVDLLGRAG++D+   FI +MP+ PN  +W  +L A CR       +G  A
Sbjct: 1429 VPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSA-CRVYSNMI-IGLLA 1486

Query: 755  ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
            A+ LF++ P+ +  YVLL+N+YA  G+WEDV   R  MK   +KK  G S   + + VH 
Sbjct: 1487 ADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHT 1546

Query: 815  FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVA 874
            F+AGD+SHP+   IYE+L  L  KM++AGYVP+T  AL D+E E KE  ++ HSEK+A+A
Sbjct: 1547 FLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIA 1606

Query: 875  F-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
            F +L      PIRI KNLRVCGDCH A K ISKIVGREI +RD+NRFHHF +G CSCGDY
Sbjct: 1607 FAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDY 1666

Query: 934  W 934
            W
Sbjct: 1667 W 1667



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 187/391 (47%), Gaps = 36/391 (9%)

Query: 5    KLFHLQI-LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H +I + H    +  L   L+  Y   G+  S   +FDE+P +N V +  ++  Y +
Sbjct: 1044 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 1103

Query: 64   KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
              + ++A  +FK M   G   + Y    VL+A    G      GMQ+H  V++     + 
Sbjct: 1104 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASS--GSEDLWVGMQIHAAVVRVGLDLNV 1161

Query: 124  LVSNVLIAMYGSCLESTDC---ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
             V N LI+MYG C     C   A R+ +Z+  RD++SWNS+++  ++ G      ++   
Sbjct: 1162 FVGNGLISMYGKC----GCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKE 1217

Query: 181  MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
            M+  G    LKP+  T  SL+ A  ++ L     ++++   +    L+S     + +++ 
Sbjct: 1218 MELLG----LKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVS----WNVMIAV 1269

Query: 241  FARLGNFYYARKIFEQM----IQKNVVS----------MNGLMEGRRKGKEVHGYLIRSG 286
            +        A  IF QM    +  + +S          ++ L+ GRR    +H Y++R  
Sbjct: 1270 YMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRR----IHEYVVRKR 1325

Query: 287  LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
            L   + + N L++MYAKCG ++ +R VF  M  +D VSW +MIS    NG   +A+  F 
Sbjct: 1326 LQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFS 1385

Query: 347  AMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             M+  GL   + + +S LS+C+  G +  G+
Sbjct: 1386 RMQDLGLNPDSIAFVSVLSACSHAGLLDEGR 1416


>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
 gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
          Length = 650

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 243/560 (43%), Positives = 353/560 (63%), Gaps = 12/560 (2%)

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           GQ  H  G   G    + VSN+L+S+YA  G L   L++F  MPE + V+W +V+ A A+
Sbjct: 102 GQLSHYSG---GAGGGIFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALAN 158

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           ++    EA+++ + M R G +PN  TF ++L A  +   G L   +HA  +K  + ++  
Sbjct: 159 ADGRKEEALRFLVAMWRDGVAPNAYTFSSVLGACGT--PGVLA-ALHASTVKVGLDSDVF 215

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           + ++L+  Y K G++D   ++F  M  R D V WNS+I+G+  +     A+ L   M   
Sbjct: 216 VRSSLIDAYMKLGDLDGGRRVFDEMVTR-DLVVWNSIIAGFAQSGDGVGAIELFMRMKDA 274

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G   +  T  +VL AC  +  LE G +VHA  ++   E D+++ +AL+DMY KCG ++ A
Sbjct: 275 GFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDA 332

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
              F  MP R+V SW++MISG A++G   +AL +F  MK +G  P+ +T VGVL ACSHA
Sbjct: 333 EALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHA 392

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           GLV++G+ +F+SM +++G+ P+ E  +CMVDLLGRAG+LD+  EFI  M + P+++IWRT
Sbjct: 393 GLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRT 452

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           +LGA CR + +   L   AA  + ++EP +    VLL+N YA   +W D  K+ KAM++ 
Sbjct: 453 LLGA-CRMH-KSGNLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDR 510

Query: 796 EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
            +KKE G SW+ ++  VHVF+AGD SHP  D I ++L  L  ++   GYVPQT+F L DL
Sbjct: 511 GMKKEPGRSWIELEKHVHVFIAGDLSHPCSDTIVQELNRLIGRISALGYVPQTEFVLQDL 570

Query: 856 EPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
             E KEDL+ YHSEK+A+AF  +      PIRIMKNLR+CGDCH+  K +SK  GR I++
Sbjct: 571 AIEQKEDLLKYHSEKMAIAFGTMHAVGGKPIRIMKNLRICGDCHAFAKLVSKSEGRMIII 630

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RD  RFHHF DG CSCGDYW
Sbjct: 631 RDPVRFHHFQDGACSCGDYW 650



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 169/364 (46%), Gaps = 42/364 (11%)

Query: 3   DAKLFHLQILKHG--------FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSW 54
           D +L H  +  HG            +F+ N+L+++Y + G L  A +LFD MP+RN V+W
Sbjct: 90  DGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTW 149

Query: 55  ACIVSGYTH-KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCL 113
             +V+   +  G   EA +    M R G   N Y   SVL AC   G         +H  
Sbjct: 150 TTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSVLGACGTPGVLA-----ALHAS 204

Query: 114 VLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTIS 173
            +K     D  V + LI  Y   L   D  RR+F+E+ TRDL+ WNSII+ ++Q GD + 
Sbjct: 205 TVKVGLDSDVFVRSSLIDAYMK-LGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVG 263

Query: 174 VFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYV 233
             +LF RM+  GF      N+ T  S++ A    V+  +   +Q+ A V K     DL +
Sbjct: 264 AIELFMRMKDAGF----SANQGTLTSVLRACTGMVMLEAG--RQVHAHVLK--YERDLIL 315

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMV- 291
            +AL+  + + G+   A  +F +M Q++V+S + ++ G  + GK      +    FD++ 
Sbjct: 316 HNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRV----FDLMK 371

Query: 292 --AVGNGLVNMY------AKCGTIDDSRSVFR-----FMIGKDSVSWNTMISGLDQNGCY 338
              V    + M       +  G ++D    FR     F I  +    N M+  L + G  
Sbjct: 372 SEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKL 431

Query: 339 EEAI 342
           +EA+
Sbjct: 432 DEAV 435



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 172/353 (48%), Gaps = 56/353 (15%)

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR-GDTISVFKLFSRMQ 182
            VSN L++MY       D A R+F+ +  R++++W ++++  +   G      +    M 
Sbjct: 116 FVSNSLVSMYAK-FGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMW 174

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           R+G    + PN YTF S++ A  +       +L  + A   K GL SD++V S+L+  + 
Sbjct: 175 RDG----VAPNAYTFSSVLGACGTP-----GVLAALHASTVKVGLDSDVFVRSSLIDAYM 225

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG---------------RRK------------- 274
           +LG+    R++F++M+ +++V  N ++ G               R K             
Sbjct: 226 KLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTS 285

Query: 275 -------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                        G++VH ++++    D++ + N L++MY KCG+++D+ ++F  M  +D
Sbjct: 286 VLRACTGMVMLEAGRQVHAHVLKYER-DLI-LHNALLDMYCKCGSLEDAEALFHRMPQRD 343

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            +SW+TMISGL QNG   EA+  F  M+ +G+  +  +++  L +C+  G +  G     
Sbjct: 344 VISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFR 403

Query: 382 EGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
              KL G+  +    N ++ L   AG L   ++    M  E D V W +++GA
Sbjct: 404 SMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGA 456



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 128/253 (50%), Gaps = 14/253 (5%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K G   DVF+ ++LI+ Y+++GDL    ++FDEM  R+ V W  I++G+   G 
Sbjct: 201 LHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGD 260

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
              A ++F  M  AGF  N+  L SVLRAC   G    + G QVH  VLK  +  D ++ 
Sbjct: 261 GVGAIELFMRMKDAGFSANQGTLTSVLRAC--TGMVMLEAGRQVHAHVLKYER--DLILH 316

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+ MY  C  S + A  +F  +  RD+ISW+++IS  +Q G +    ++F  M+ EG 
Sbjct: 317 NALLDMYCKC-GSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEG- 374

Query: 187 RYSLKPNEYTF-GSLITAAYSSVLS-GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
              + PN  T  G L   +++ ++  G Y  +   +M K  G+  +    + +V    R 
Sbjct: 375 ---VAPNRITMVGVLFACSHAGLVEDGWYYFR---SMKKLFGIQPEREHHNCMVDLLGRA 428

Query: 245 GNFYYARKIFEQM 257
           G    A +    M
Sbjct: 429 GKLDEAVEFIRDM 441


>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 258/661 (39%), Positives = 381/661 (57%), Gaps = 39/661 (5%)

Query: 276 KEVHGYL-IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           K++H  + I   L    ++G  L+  YA CG    +R +F  +  K+ V +N MI     
Sbjct: 55  KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 114

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N  Y +A++ F  M   G+   +++    L + +    + +G QIH   +++GLD +V V
Sbjct: 115 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFV 174

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            N L+S+Y   G L    +V   MP  D VSWNS++   A +     +A++   +M   G
Sbjct: 175 GNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQF-DDALEVCKEMELLG 233

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             P+  T  ++L A ++                      T ++N               +
Sbjct: 234 LKPDAGTMASLLPAVTN----------------------TCLDNVSF-----------VK 260

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           ++F +++  +  VSWN MI+ Y++N +  +A+++   M       D  + A+VL AC  +
Sbjct: 261 EMFMKLAN-KSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDL 319

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
           + L  G  +H   VR  L+ ++++ +AL+DMY+KCG ++YA   FD M  R+V SW SMI
Sbjct: 320 SALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMI 379

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
           S Y  +G G  A++LFS+M+  G  PD + FV VLSACSHAGL+DEG  +FK M++   +
Sbjct: 380 SAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKI 439

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
           +P++E F CMVDLLGRAG++D+   FI +MP+ PN  +W  +L A CR       +G  A
Sbjct: 440 VPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSA-CRVYSNMI-IGLLA 497

Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
           A+ LF++ P+ +  YVLL+N+YA  G+WEDV   R  MK   +KK  G S   + + VH 
Sbjct: 498 ADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHT 557

Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVA 874
           F+AGD+SHP+   IYE+L     KM++AGYVP+T  AL D+E E KE  ++ HSEK+A+A
Sbjct: 558 FLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIA 617

Query: 875 F-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
           F +L      PIRI KNLRVCGDCH A K ISKIVGREI +RD+NRFHHF +G CSCGDY
Sbjct: 618 FAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDY 677

Query: 934 W 934
           W
Sbjct: 678 W 678



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 185/384 (48%), Gaps = 22/384 (5%)

Query: 5   KLFHLQI-LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           K  H +I + H    +  L   L+  Y   G+  S   +FDE+P +N V +  ++  Y +
Sbjct: 55  KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 114

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
             + ++A  +FK M   G   + Y    VL+A    G      GMQ+H  V++     + 
Sbjct: 115 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASS--GSEDLWVGMQIHAAVVRVGLDLNV 172

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V N LI+MYG C    + A R+ +++  RD++SWNS+++  ++ G      ++   M+ 
Sbjct: 173 FVGNGLISMYGKCGCLVE-ACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMEL 231

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G    LKP+  T  SL+ A  ++ L     ++++   +    L+S     + +++ +  
Sbjct: 232 LG----LKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVS----WNVMIAVYMN 283

Query: 244 LGNFYYARKIFEQM----IQKNVVSMN------GLMEGRRKGKEVHGYLIRSGLFDMVAV 293
                 A  IF QM    +  + +S+       G +     G+ +H Y++R  L   + +
Sbjct: 284 NSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLL 343

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
            N L++MYAKCG ++ +R VF  M  +D VSW +MIS    NG   +A+  F  M+  GL
Sbjct: 344 ENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGL 403

Query: 354 MSSNFSLISTLSSCASLGWIMLGQ 377
              + + +S LS+C+  G +  G+
Sbjct: 404 NPDSIAFVSVLSACSHAGLLDEGR 427


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 281/845 (33%), Positives = 433/845 (51%), Gaps = 85/845 (10%)

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +  NV++  Y      +D A  +F  +  RD+ SWN+++S Y Q    +   + F  M R
Sbjct: 92  ITHNVMLNGYAKLGRLSD-AVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHR 150

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G  +   PN +T    + +     L    L  Q+LAMV+K     D  V +ALV  F R
Sbjct: 151 SGDSW---PNAFTLACAMKSC--GALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 205

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
            G    A ++F ++ +  +   N ++ G                             Y K
Sbjct: 206 CGAVDLASRLFVRIKEPTMFCRNSMLAG-----------------------------YVK 236

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
              +D +  +F  M  +D VSWN M+S L Q+G   EA+     M+  G+   + +  S+
Sbjct: 237 TYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSS 296

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L++CA L  +  G+Q+H + ++     D  V++AL+ LYA +G       VF  + + + 
Sbjct: 297 LTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNN 356

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           V+W  +I  F       +E+V+ +  MR    + +      +++   S     LG Q+H+
Sbjct: 357 VAWTVLISGFL-QYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHS 415

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
             +K        + N+L+S Y KC  +   E IF  M+E+ D VSW SMI+ Y     + 
Sbjct: 416 LCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEK-DIVSWTSMITAYSQVGNVA 474

Query: 544 KAMN----------LVWFMM-----QRGQ-----------------RLDHFTFATVLSAC 571
           KA            + W  M     Q G                  R D  T+ T+   C
Sbjct: 475 KAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGC 534

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           A +   + G ++    V+  L  D  + +A++ MYSKCGRI  A + FD + V+++ SWN
Sbjct: 535 ADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWN 594

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           +MI+GY++HG G +A+ +F  +   G  PD++++V VLS CSH+GLV EG  +F  M + 
Sbjct: 595 AMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRA 654

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTEL 750
           + + P LE FSCMVDLLGRAG L + ++ I+ MP+ P + +W  +L AC    N    EL
Sbjct: 655 HNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGN---NEL 711

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
              AA  +FE++  ++ +Y+L+A +YA  GK +D A+ RK M++  +KK  G SW+ + +
Sbjct: 712 AELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDN 771

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
            VHVF A D SHP+   I +KL EL +K+   GYV            +S    + +HSEK
Sbjct: 772 KVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYV----------RTDSTRSEI-HHSEK 820

Query: 871 IAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +AVAF ++T  + +PI IMKNLR+CGDCH+  K IS + GRE V+RD+ RFHHFN G CS
Sbjct: 821 LAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCS 880

Query: 930 CGDYW 934
           CGDYW
Sbjct: 881 CGDYW 885



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 160/648 (24%), Positives = 280/648 (43%), Gaps = 122/648 (18%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           DA+   L  + H    +V   N ++N Y ++G L+ A +LF  MP R+  SW  ++SGY 
Sbjct: 77  DARRLLLMDIAHP---NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYF 133

Query: 63  HKGMSNEACKMFKEMVRAG-FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                  + + F  M R+G    N + L   +++C   G       +Q+  +V K +   
Sbjct: 134 QSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALG--WHSLALQLLAMVQKFDSQD 191

Query: 122 DGLVSNVLIAMYGSC-------------LEST-----------------DCARRIFEEIE 151
           D  V+  L+ M+  C              E T                 D A  +F+ + 
Sbjct: 192 DSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMP 251

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
            RD++SWN ++S  SQ G       +   MQ +G R  L    YT      A  SS+  G
Sbjct: 252 ERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR--LDSTTYTSSLTACARLSSLRWG 309

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             L  Q++  +       D YV SALV  +A+ G F  A+ +F  +  +N V+   L+ G
Sbjct: 310 KQLHAQVIRNLPHI----DPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISG 365

Query: 272 RRK-----------------------------------------GKEVHGYLIRSGLFDM 290
             +                                         G+++H   ++SG    
Sbjct: 366 FLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQA 425

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ-----------NGCYE 339
           V V N L++MYAKC  +  + ++FRFM  KD VSW +MI+   Q           +G  E
Sbjct: 426 VVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSE 485

Query: 340 EAIMNFCAM---------RRDGL------MSSNF------SLISTLSSCASLGWIMLGQQ 378
           + ++ + AM           DGL      +S  +      + ++    CA LG   LG Q
Sbjct: 486 KNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQ 545

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           I G  +K+GL  D SV+NA++++Y+  G +    KVF  +   D VSWN++I  ++    
Sbjct: 546 IIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYS-QHG 604

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTI 496
           +  +A++ + D+ + G  P+ ++++ +L+  S   + + G + +  ++K  +N++     
Sbjct: 605 MGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEG-KFYFDMMKRAHNISPGLEH 663

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIH--NEL 541
            + ++   G+ G + + + +   M  +     W +++S   IH  NEL
Sbjct: 664 FSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNEL 711



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 209/458 (45%), Gaps = 51/458 (11%)

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI-GAFADSEALVSEAVKYYLD 449
           +V   N +L+ YA  G LS  +++F  MP  D  SWN+++ G F   + LVS  ++ +L 
Sbjct: 90  NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVS--LETFLS 147

Query: 450 MRRAGWS-PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
           M R+G S PN  T    + +  +     L  Q+ A V K++  +++ +  AL+  + +CG
Sbjct: 148 MHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCG 207

Query: 509 EMDDCEKIFARMSE------------------------------RRDEVSWNSMISGYIH 538
            +D   ++F R+ E                               RD VSWN M+S    
Sbjct: 208 AVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQ 267

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
           +  + +A+++V  M  +G RLD  T+ + L+ACA +++L  G ++HA  +R     D  +
Sbjct: 268 SGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYV 327

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            SALV++Y+K G    A   F+ +  RN  +W  +ISG+ ++G   +++ LF+QM+ +  
Sbjct: 328 ASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELM 387

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
             D      ++S C     +  G +   S+    G I  +   + ++ +  +   L   E
Sbjct: 388 TLDQFALATLISGCCSRMDLCLG-RQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAE 446

Query: 719 ---EFINKMPITPNSLIWRTVLGACCRANCRKTELGR--KAANMLFEMEPQNAVNYVLLA 773
               F+N+  I      W +++ A        +++G   KA      M  +N + +  + 
Sbjct: 447 AIFRFMNEKDIVS----WTSMITA-------YSQVGNVAKAREFFDGMSEKNVITWNAML 495

Query: 774 NMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
             Y   G  ED  +  K M   E  +    ++VT+  G
Sbjct: 496 GAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKG 533


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 269/773 (34%), Positives = 413/773 (53%), Gaps = 73/773 (9%)

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY 281
           +K+  L S + V   ++    RL +F             +V+   G +   R G   HG 
Sbjct: 93  IKQGRLDSAINVSCRMLRAGTRLDHF----------TLPHVLKACGELPSYRCGSAFHGL 142

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK---DSVSWNTMISGLDQNGCY 338
           +  +G    V + N LV MY++CG+++++  +F  +  +   D +SWN+++S   ++   
Sbjct: 143 ICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNA 202

Query: 339 EEAIMNFCAM------RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
             A+  F  M      +     S   S+++ L +C SL  +   +++HG  ++ G   DV
Sbjct: 203 WTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDV 262

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS---------------- 436
            V NAL+  YA  G +   +KVF +M   D VSWN+++  ++ S                
Sbjct: 263 FVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKE 322

Query: 437 ---------EALVS---------EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
                     A+++         EA+  +  M  +G  PN VT I++L+A +S      G
Sbjct: 323 NIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 382

Query: 479 HQVHAQVIKYNVAN----------ETTIENALLSCYGKCGEMDDCEKIFARMS-ERRDEV 527
            ++HA  +K  +            +  + NAL+  Y KC        IF  +  E R+ V
Sbjct: 383 MEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVV 442

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQR--GQRLDHFTFATVLSACASVATLERGMEVHA 585
           +W  MI G+        A+ L   M+    G   + +T + +L ACA +A +  G ++HA
Sbjct: 443 TWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHA 502

Query: 586 CGVRACLEFD---VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
             +R   ++D     + + L++MYSKCG +D A   FD M  ++  SW SM++GY  HG 
Sbjct: 503 YVLRH-HQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGR 561

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
           G +AL +F +M+  G +PD +TF+ VL ACSH G+VD+G  +F SMS  YGL P+ E ++
Sbjct: 562 GSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYA 621

Query: 703 CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
             +DLL R G LDK  + +  MP+ P +++W  +L A CR +    EL   A N L EM 
Sbjct: 622 YAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSA-CRVH-SNVELAEHALNKLVEMN 679

Query: 763 PQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESH 822
            +N  +Y L++N+YA+ G+W+DVA+ R  MK++ +KK  GCSWV  + G   F  GD SH
Sbjct: 680 AENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSH 739

Query: 823 PEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNS 881
           P    IY  L+ L  +++  GYVP+T FAL D++ E K +L+  HSEK+A+A+ +LT   
Sbjct: 740 PLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFP 799

Query: 882 KLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             PIRI KNLRVCGDCHSAF +ISKIV  EIV+RD +RFHHF +G CSCG YW
Sbjct: 800 GCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 852



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 178/673 (26%), Positives = 298/673 (44%), Gaps = 96/673 (14%)

Query: 26  LINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLN 85
           ++  Y+  G    A  + + +    +V W  ++  +  +G  + A  +   M+RAG  L+
Sbjct: 57  VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLD 116

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
            + L  VL+AC E  PS ++ G   H L+  +    +  + N L+AMY  C  S + A  
Sbjct: 117 HFTLPHVLKACGEL-PS-YRCGSAFHGLICCNGFESNVFICNALVAMYSRC-GSLEEASM 173

Query: 146 IFEEIETR---DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           IF+EI  R   D+ISWNSI+S + +  +  +   LFS+M                  +  
Sbjct: 174 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 233

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
                 L      +++     + G   D++VG+AL+  +A+ G    A K+F  M  K+V
Sbjct: 234 LPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 293

Query: 263 VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM----I 318
           VS N ++ G                             Y++ G    +  +F+ M    I
Sbjct: 294 VSWNAMVAG-----------------------------YSQSGNFKAAFELFKNMRKENI 324

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
             D V+W  +I+G  Q GC  EA+  F  M   G + +  ++IS LS+CASLG    G +
Sbjct: 325 PLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGME 384

Query: 379 IHGEGLKL----------GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP--EHDQVSW 426
           IH   LK           G D D+ V NAL+ +Y+          +F  +P  E + V+W
Sbjct: 385 IHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTW 444

Query: 427 NSVIGA---FADSEALVSEAVKYYLDM--RRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
             +IG    + DS    ++A+K +++M     G +PN  T   IL A +  +  ++G Q+
Sbjct: 445 TVMIGGHAQYGDS----NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 500

Query: 482 HAQVIKYNVANETT--IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           HA V++++  + +   + N L++ Y KCG++D    +F  MS+ +  +SW SM++GY  +
Sbjct: 501 HAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQ-KSAISWTSMMTGYGMH 559

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
               +A+++   M + G   D  TF  VL AC+    +++G+                  
Sbjct: 560 GRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSY---------------- 603

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
                        D  S  + L P    Y++   I   AR G  DKA      M ++   
Sbjct: 604 ------------FDSMSADYGLTPRAEHYAY--AIDLLARFGRLDKAWKTVKDMPME--- 646

Query: 660 PDHVTFVGVLSAC 672
           P  V +V +LSAC
Sbjct: 647 PTAVVWVALLSAC 659



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 136/499 (27%), Positives = 227/499 (45%), Gaps = 75/499 (15%)

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           ++G G+V  Y  CG  D +  V   +    +V WN +I    + G  + AI   C M R 
Sbjct: 52  SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 111

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G    +F+L   L +C  L     G   HG     G +S+V + NAL+++Y+  G L   
Sbjct: 112 GTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 171

Query: 412 LKVFFLMPEH---DQVSWNSVIGAFADSEALVSEAVKYYLDM------RRAGWSPNGVTF 462
             +F  + +    D +SWNS++ A   S    + A+  +  M      +      + ++ 
Sbjct: 172 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWT-ALDLFSKMTLIVHEKPTNERSDIISI 230

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
           +NIL A  S        +VH   I+     +  + NAL+  Y KCG M++  K+F  M E
Sbjct: 231 VNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVF-NMME 289

Query: 523 RRDEVSWNSMISGY---------------IHNELLP--------------------KAMN 547
            +D VSWN+M++GY               +  E +P                    +A+N
Sbjct: 290 FKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALN 349

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL----------EFDVV 597
           +   M+  G   +  T  +VLSACAS+    +GME+HA  ++ CL          + D++
Sbjct: 350 VFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLM 409

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPV--RNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
           + +AL+DMYSKC     A   FD +P+  RNV +W  MI G+A++G  + AL LF +M  
Sbjct: 410 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS 469

Query: 656 D--GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF--------SCMV 705
           +  G  P+  T   +L AC+H   +  G        Q++  + +  Q+        +C++
Sbjct: 470 EPYGVAPNAYTISCILMACAHLAAIRIG-------KQIHAYVLRHHQYDSSAYFVANCLI 522

Query: 706 DLLGRAGELDKIEEFINKM 724
           ++  + G++D      + M
Sbjct: 523 NMYSKCGDVDTARHVFDSM 541



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 225/523 (43%), Gaps = 100/523 (19%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR---NSVSWACIVSGYTH 63
           FH  I  +GF  +VF+CN L+ +Y R G L  AS +FDE+  R   + +SW  IVS +  
Sbjct: 139 FHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVK 198

Query: 64  KGMSNEACKMFKEM---VRAGFLLNRYALGSVLRACQECGP-SGFKFGMQVHCLVLKSNQ 119
              +  A  +F +M   V       R  + S++     CG         +VH   +++  
Sbjct: 199 SSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGT 258

Query: 120 TFDGLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
             D  V N LI  Y  C  +E+   A ++F  +E +D++SWN++++ YSQ G+  + F+L
Sbjct: 259 FLDVFVGNALIDAYAKCGLMEN---AVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFEL 315

Query: 178 FSRMQREGFR------------YSLK-------------------PNEYTFGSLITA--- 203
           F  M++E               YS +                   PN  T  S+++A   
Sbjct: 316 FKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACAS 375

Query: 204 --AYSSVLS-GSYLLQQILAMVKK--AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
             A+S  +   +Y L+  L  +     G   DL V +AL+  +++  +F  AR IF+ + 
Sbjct: 376 LGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIP 435

Query: 259 --QKNVVSMNGLMEGR-------------------------------------------R 273
             ++NVV+   ++ G                                            R
Sbjct: 436 LEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIR 495

Query: 274 KGKEVHGYLIRSGLFDMVA--VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
            GK++H Y++R   +D  A  V N L+NMY+KCG +D +R VF  M  K ++SW +M++G
Sbjct: 496 IGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTG 555

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDS 390
              +G   EA+  F  MR+ G +  + + +  L +C+  G +  G           GL  
Sbjct: 556 YGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTP 615

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                   + L A  G L +  K    MP E   V W +++ A
Sbjct: 616 RAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSA 658



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 129/552 (23%), Positives = 225/552 (40%), Gaps = 114/552 (20%)

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           S  S+   +++ Y   G     L V   +     V WN +I        L S A+     
Sbjct: 49  SPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDS-AINVSCR 107

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M RAG   +  T  ++L A       + G   H  +      +   I NAL++ Y +CG 
Sbjct: 108 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 167

Query: 510 MDDCEKIFARMSER--RDEVSWNSMISGYIHN-------ELLPKAMNLVWFMMQRGQRLD 560
           +++   IF  +++R   D +SWNS++S ++ +       +L  K M L+       +R D
Sbjct: 168 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSK-MTLIVHEKPTNERSD 226

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
             +   +L AC S+  + +  EVH   +R     DV +G+AL+D Y+KCG ++ A + F+
Sbjct: 227 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 286

Query: 621 LMPVRNVYSWNSMISGYARHGH-----------------------------------GDK 645
           +M  ++V SWN+M++GY++ G+                                     +
Sbjct: 287 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 346

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF----------------------- 682
           AL +F QM   G LP+ VT + VLSAC+  G   +G                        
Sbjct: 347 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDE 406

Query: 683 ---------------KHFKSMSQVYGLIPQLEQ----FSCMVDLLGRAGEL-DKIEEFIN 722
                          + FK+   ++  IP  E+    ++ M+    + G+  D ++ F+ 
Sbjct: 407 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 466

Query: 723 KMP----ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVL---LANM 775
            +     + PN+     +L AC  A+     +G++    +      ++  Y +   L NM
Sbjct: 467 MISEPYGVAPNAYTISCILMAC--AHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINM 524

Query: 776 YASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKEL 835
           Y+  G   DV  AR       + +++  SW +M  G  +   G E+            ++
Sbjct: 525 YSKCG---DVDTARHVFD--SMSQKSAISWTSMMTGYGMHGRGSEA-----------LDI 568

Query: 836 NQKMRDAGYVPQ 847
             KMR AG+VP 
Sbjct: 569 FDKMRKAGFVPD 580



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 174/371 (46%), Gaps = 68/371 (18%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIV------ 58
           K  H   +++G   DVF+ N LI+ Y + G + +A K+F+ M  ++ VSW  +V      
Sbjct: 247 KEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQS 306

Query: 59  -----------------------------SGYTHKGMSNEACKMFKEMVRAGFLLNRYAL 89
                                        +GY+ +G S+EA  +F++M+ +G L N   +
Sbjct: 307 GNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTI 366

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKS-----NQTFDG-----LVSNVLIAMYGSCLES 139
            SVL AC   G   F  GM++H   LK+     +  F G     +V N LI MY  C  S
Sbjct: 367 ISVLSACASLG--AFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKC-RS 423

Query: 140 TDCARRIFEEI--ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
              AR IF++I  E R++++W  +I  ++Q GD+    KLF  M  E   Y + PN YT 
Sbjct: 424 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE--PYGVAPNAYTI 481

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLL--SDLYVGSALVSGFARLGNFYYARKIFE 255
             ++ A   + L+   + +QI A V +      S  +V + L++ +++ G+   AR +F+
Sbjct: 482 SCILMAC--AHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFD 539

Query: 256 QMIQKNVVSMNGLMEG---RRKGKE---VHGYLIRSGLF-DMVAVGNGLVNMYA--KCGT 306
            M QK+ +S   +M G     +G E   +   + ++G   D +     LV +YA   CG 
Sbjct: 540 SMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITF---LVVLYACSHCGM 596

Query: 307 IDDSRSVFRFM 317
           +D   S F  M
Sbjct: 597 VDQGLSYFDSM 607


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 262/741 (35%), Positives = 401/741 (54%), Gaps = 63/741 (8%)

Query: 254 FEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
            +     +V+   G +   R G   HG +  +G    V + N LV MY++CG+++++  +
Sbjct: 8   LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 67

Query: 314 FRFMIGK---DSVSWNTMISGLDQNGCYEEAIMNFCAM------RRDGLMSSNFSLISTL 364
           F  +  +   D +SWN+++S   ++     A+  F  M      +     S   S+++ L
Sbjct: 68  FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 127

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +C SL  +   +++HG  ++ G   DV V NAL+  YA  G +   +KVF +M   D V
Sbjct: 128 PACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVV 187

Query: 425 SWNSVIGAFADS-------------------------EALVS---------EAVKYYLDM 450
           SWN+++  ++ S                          A+++         EA+  +  M
Sbjct: 188 SWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQM 247

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN----------ETTIENAL 500
             +G  PN VT I++L+A +S      G ++HA  +K  +            +  + NAL
Sbjct: 248 IFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNAL 307

Query: 501 LSCYGKCGEMDDCEKIFARMS-ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR--GQ 557
           +  Y KC        IF  +  E R+ V+W  MI G+        A+ L   M+    G 
Sbjct: 308 IDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGV 367

Query: 558 RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD---VVIGSALVDMYSKCGRIDY 614
             + +T + +L ACA +A +  G ++HA  +R   ++D     + + L++MYSKCG +D 
Sbjct: 368 APNAYTISCILMACAHLAAIRIGKQIHAYVLRH-HQYDSSAYFVANCLINMYSKCGDVDT 426

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
           A   FD M  ++  SW SM++GY  HG G +AL +F +M+  G +PD +TF+ VL ACSH
Sbjct: 427 ARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 486

Query: 675 AGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWR 734
            G+VD+G  +F SMS  YGL P+ E ++  +DLL R G LDK  + +  MP+ P +++W 
Sbjct: 487 CGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWV 546

Query: 735 TVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKE 794
            +L A CR +    EL   A N L EM  +N  +Y L++N+YA+ G+W+DVA+ R  MK+
Sbjct: 547 ALLSA-CRVH-SNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKK 604

Query: 795 AEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFD 854
           + +KK  GCSWV  + G   F  GD SHP    IY  L+ L  +++  GYVP+T FAL D
Sbjct: 605 SGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHD 664

Query: 855 LEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIV 913
           ++ E K +L+  HSEK+A+A+ +LT     PIRI KNLRVCGDCHSAF +ISKIV  EIV
Sbjct: 665 VDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIV 724

Query: 914 LRDSNRFHHFNDGKCSCGDYW 934
           +RD +RFHHF +G CSCG YW
Sbjct: 725 VRDPSRFHHFKNGSCSCGGYW 745



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 171/622 (27%), Positives = 278/622 (44%), Gaps = 96/622 (15%)

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
           M+RAG  L+ + L  VL+AC E  PS ++ G   H L+  +    +  + N L+AMY  C
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGEL-PS-YRCGSAFHGLICCNGFESNVFICNALVAMYSRC 58

Query: 137 LESTDCARRIFEEIETR---DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPN 193
             S + A  IF+EI  R   D+ISWNSI+S + +  +  +   LFS+M            
Sbjct: 59  -GSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNER 117

Query: 194 EYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKI 253
                 +        L      +++     + G   D++VG+AL+  +A+ G    A K+
Sbjct: 118 SDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKV 177

Query: 254 FEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
           F  M  K+VVS N ++ G                             Y++ G    +  +
Sbjct: 178 FNMMEFKDVVSWNAMVAG-----------------------------YSQSGNFKAAFEL 208

Query: 314 FRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           F+ M    I  D V+W  +I+G  Q GC  EA+  F  M   G + +  ++IS LS+CAS
Sbjct: 209 FKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACAS 268

Query: 370 LGWIMLGQQIHGEGLKL----------GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           LG    G +IH   LK           G D D+ V NAL+ +Y+          +F  +P
Sbjct: 269 LGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIP 328

Query: 420 --EHDQVSWNSVIGA---FADSEALVSEAVKYYLDM--RRAGWSPNGVTFINILAAASSF 472
             E + V+W  +IG    + DS    ++A+K +++M     G +PN  T   IL A +  
Sbjct: 329 LEERNVVTWTVMIGGHAQYGDS----NDALKLFVEMISEPYGVAPNAYTISCILMACAHL 384

Query: 473 SMGKLGHQVHAQVIKYNVANETT--IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
           +  ++G Q+HA V++++  + +   + N L++ Y KCG++D    +F  MS+ +  +SW 
Sbjct: 385 AAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQ-KSAISWT 443

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           SM++GY  +    +A+++   M + G   D  TF  VL AC+    +++G+         
Sbjct: 444 SMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSY------- 496

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
                                 D  S  + L P    Y++   I   AR G  DKA    
Sbjct: 497 ---------------------FDSMSADYGLTPRAEHYAY--AIDLLARFGRLDKAWKTV 533

Query: 651 SQMKLDGPLPDHVTFVGVLSAC 672
             M ++   P  V +V +LSAC
Sbjct: 534 KDMPME---PTAVVWVALLSAC 552



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 209/456 (45%), Gaps = 76/456 (16%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M R G    +F+L   L +C  L     G   HG     G +S+V + NAL+++Y+  G 
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 408 LSRCLKVFFLMPEH---DQVSWNSVIGAFADSEALVSEAVKYYLDM------RRAGWSPN 458
           L     +F  + +    D +SWNS++ A   S    + A+  +  M      +      +
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWT-ALDLFSKMTLIVHEKPTNERSD 119

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
            ++ +NIL A  S        +VH   I+     +  + NAL+  Y KCG M++  K+F 
Sbjct: 120 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVF- 178

Query: 519 RMSERRDEVSWNSMISGY---------------IHNELLP-------------------- 543
            M E +D VSWN+M++GY               +  E +P                    
Sbjct: 179 NMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSH 238

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL----------E 593
           +A+N+   M+  G   +  T  +VLSACAS+    +GME+HA  ++ CL          +
Sbjct: 239 EALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGED 298

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPV--RNVYSWNSMISGYARHGHGDKALTLFS 651
            D+++ +AL+DMYSKC     A   FD +P+  RNV +W  MI G+A++G  + AL LF 
Sbjct: 299 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 358

Query: 652 QMKLD--GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF-------- 701
           +M  +  G  P+  T   +L AC+H   +  G        Q++  + +  Q+        
Sbjct: 359 EMISEPYGVAPNAYTISCILMACAHLAAIRIG-------KQIHAYVLRHHQYDSSAYFVA 411

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
           +C++++  + G++D      + M    +++ W +++
Sbjct: 412 NCLINMYSKCGDVDTARHVFDSMS-QKSAISWTSMM 446



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 225/523 (43%), Gaps = 100/523 (19%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR---NSVSWACIVSGYTH 63
           FH  I  +GF  +VF+CN L+ +Y R G L  AS +FDE+  R   + +SW  IVS +  
Sbjct: 32  FHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVK 91

Query: 64  KGMSNEACKMFKEM---VRAGFLLNRYALGSVLRACQECGP-SGFKFGMQVHCLVLKSNQ 119
              +  A  +F +M   V       R  + S++     CG         +VH   +++  
Sbjct: 92  SSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGT 151

Query: 120 TFDGLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
             D  V N LI  Y  C  +E+   A ++F  +E +D++SWN++++ YSQ G+  + F+L
Sbjct: 152 FLDVFVGNALIDAYAKCGLMEN---AVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFEL 208

Query: 178 FSRMQREGFR------------YSLK-------------------PNEYTFGSLITA--- 203
           F  M++E               YS +                   PN  T  S+++A   
Sbjct: 209 FKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACAS 268

Query: 204 --AYSSVLS-GSYLLQQILAMVKK--AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
             A+S  +   +Y L+  L  +     G   DL V +AL+  +++  +F  AR IF+ + 
Sbjct: 269 LGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIP 328

Query: 259 --QKNVVSMNGLMEGR-------------------------------------------R 273
             ++NVV+   ++ G                                            R
Sbjct: 329 LEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIR 388

Query: 274 KGKEVHGYLIRSGLFDMVA--VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
            GK++H Y++R   +D  A  V N L+NMY+KCG +D +R VF  M  K ++SW +M++G
Sbjct: 389 IGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTG 448

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDS 390
              +G   EA+  F  MR+ G +  + + +  L +C+  G +  G           GL  
Sbjct: 449 YGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTP 508

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                   + L A  G L +  K    MP E   V W +++ A
Sbjct: 509 RAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSA 551



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 116/492 (23%), Positives = 205/492 (41%), Gaps = 113/492 (22%)

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M RAG   +  T  ++L A       + G   H  +      +   I NAL++ Y +CG 
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 510 MDDCEKIFARMSER--RDEVSWNSMISGYIHN-------ELLPKAMNLVWFMMQRGQRLD 560
           +++   IF  +++R   D +SWNS++S ++ +       +L  K M L+       +R D
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSK-MTLIVHEKPTNERSD 119

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
             +   +L AC S+  + +  EVH   +R     DV +G+AL+D Y+KCG ++ A + F+
Sbjct: 120 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 179

Query: 621 LMPVRNVYSWNSMISGYARHGH-----------------------------------GDK 645
           +M  ++V SWN+M++GY++ G+                                     +
Sbjct: 180 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 239

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF----------------------- 682
           AL +F QM   G LP+ VT + VLSAC+  G   +G                        
Sbjct: 240 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDE 299

Query: 683 ---------------KHFKSMSQVYGLIPQLEQ----FSCMVDLLGRAGEL-DKIEEFIN 722
                          + FK+   ++  IP  E+    ++ M+    + G+  D ++ F+ 
Sbjct: 300 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 359

Query: 723 KMP----ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVL---LANM 775
            +     + PN+     +L AC  A+     +G++    +      ++  Y +   L NM
Sbjct: 360 MISEPYGVAPNAYTISCILMAC--AHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINM 417

Query: 776 YASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKEL 835
           Y+  G   DV  AR       + +++  SW +M  G  +   G E+            ++
Sbjct: 418 YSKCG---DVDTARHVFD--SMSQKSAISWTSMMTGYGMHGRGSEA-----------LDI 461

Query: 836 NQKMRDAGYVPQ 847
             KMR AG+VP 
Sbjct: 462 FDKMRKAGFVPD 473



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 174/371 (46%), Gaps = 68/371 (18%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIV------ 58
           K  H   +++G   DVF+ N LI+ Y + G + +A K+F+ M  ++ VSW  +V      
Sbjct: 140 KEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQS 199

Query: 59  -----------------------------SGYTHKGMSNEACKMFKEMVRAGFLLNRYAL 89
                                        +GY+ +G S+EA  +F++M+ +G L N   +
Sbjct: 200 GNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTI 259

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKS-----NQTFDG-----LVSNVLIAMYGSCLES 139
            SVL AC   G   F  GM++H   LK+     +  F G     +V N LI MY  C  S
Sbjct: 260 ISVLSACASLG--AFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKC-RS 316

Query: 140 TDCARRIFEEI--ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
              AR IF++I  E R++++W  +I  ++Q GD+    KLF  M  E   Y + PN YT 
Sbjct: 317 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE--PYGVAPNAYTI 374

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLL--SDLYVGSALVSGFARLGNFYYARKIFE 255
             ++ A   + L+   + +QI A V +      S  +V + L++ +++ G+   AR +F+
Sbjct: 375 SCILMAC--AHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFD 432

Query: 256 QMIQKNVVSMNGLMEG---RRKGKE---VHGYLIRSGLF-DMVAVGNGLVNMYA--KCGT 306
            M QK+ +S   +M G     +G E   +   + ++G   D +     LV +YA   CG 
Sbjct: 433 SMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITF---LVVLYACSHCGM 489

Query: 307 IDDSRSVFRFM 317
           +D   S F  M
Sbjct: 490 VDQGLSYFDSM 500


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 281/845 (33%), Positives = 433/845 (51%), Gaps = 85/845 (10%)

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +  NV++  Y      +D A  +F  +  RD+ SWN+++S Y Q    +   + F  M R
Sbjct: 72  ITHNVMLNGYAKLGRLSD-AVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHR 130

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G  +   PN +T    + +     L    L  Q+LAMV+K     D  V +ALV  F R
Sbjct: 131 SGDSW---PNAFTLACAMKSC--GALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 185

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
            G    A ++F ++ +  +   N ++ G                             Y K
Sbjct: 186 CGAVDLASRLFVRIKEPTMFCRNSMLAG-----------------------------YVK 216

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
              +D +  +F  M  +D VSWN M+S L Q+G   EA+     M+  G+   + +  S+
Sbjct: 217 TYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSS 276

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L++CA L  +  G+Q+H + ++     D  V++AL+ LYA +G       VF  + + + 
Sbjct: 277 LTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNN 336

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           V+W  +I  F       +E+V+ +  MR    + +      +++   S     LG Q+H+
Sbjct: 337 VAWTVLISGFL-QYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHS 395

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
             +K        + N+L+S Y KC  +   E IF  M+E+ D VSW SMI+ Y     + 
Sbjct: 396 LCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEK-DIVSWTSMITAYSQVGNVA 454

Query: 544 KAMN----------LVWFMM-----QRGQ-----------------RLDHFTFATVLSAC 571
           KA            + W  M     Q G                  R D  T+ T+   C
Sbjct: 455 KAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGC 514

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           A +   + G ++    V+  L  D  + +A++ MYSKCGRI  A + FD + V+++ SWN
Sbjct: 515 ADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWN 574

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           +MI+GY++HG G +A+ +F  +   G  PD++++V VLS CSH+GLV EG  +F  M + 
Sbjct: 575 AMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRA 634

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTEL 750
           + + P LE FSCMVDLLGRAG L + ++ I+ MP+ P + +W  +L AC    N    EL
Sbjct: 635 HNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGN---NEL 691

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
              AA  +FE++  ++ +Y+L+A +YA  GK +D A+ RK M++  +KK  G SW+ + +
Sbjct: 692 AELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDN 751

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
            VHVF A D SHP+   I +KL EL +K+   GYV            +S    + +HSEK
Sbjct: 752 KVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYV----------RTDSTRSEI-HHSEK 800

Query: 871 IAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +AVAF ++T  + +PI IMKNLR+CGDCH+  K IS + GRE V+RD+ RFHHFN G CS
Sbjct: 801 LAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCS 860

Query: 930 CGDYW 934
           CGDYW
Sbjct: 861 CGDYW 865



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 160/648 (24%), Positives = 280/648 (43%), Gaps = 122/648 (18%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           DA+   L  + H    +V   N ++N Y ++G L+ A +LF  MP R+  SW  ++SGY 
Sbjct: 57  DARRLLLMDIAHP---NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYF 113

Query: 63  HKGMSNEACKMFKEMVRAG-FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                  + + F  M R+G    N + L   +++C   G       +Q+  +V K +   
Sbjct: 114 QSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALG--WHSLALQLLAMVQKFDSQD 171

Query: 122 DGLVSNVLIAMYGSC-------------LEST-----------------DCARRIFEEIE 151
           D  V+  L+ M+  C              E T                 D A  +F+ + 
Sbjct: 172 DSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMP 231

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
            RD++SWN ++S  SQ G       +   MQ +G R  L    YT      A  SS+  G
Sbjct: 232 ERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR--LDSTTYTSSLTACARLSSLRWG 289

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             L  Q++  +       D YV SALV  +A+ G F  A+ +F  +  +N V+   L+ G
Sbjct: 290 KQLHAQVIRNLPHI----DPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISG 345

Query: 272 RRK-----------------------------------------GKEVHGYLIRSGLFDM 290
             +                                         G+++H   ++SG    
Sbjct: 346 FLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQA 405

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ-----------NGCYE 339
           V V N L++MYAKC  +  + ++FRFM  KD VSW +MI+   Q           +G  E
Sbjct: 406 VVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSE 465

Query: 340 EAIMNFCAM---------RRDGL------MSSNF------SLISTLSSCASLGWIMLGQQ 378
           + ++ + AM           DGL      +S  +      + ++    CA LG   LG Q
Sbjct: 466 KNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQ 525

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           I G  +K+GL  D SV+NA++++Y+  G +    KVF  +   D VSWN++I  ++    
Sbjct: 526 IIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYS-QHG 584

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTI 496
           +  +A++ + D+ + G  P+ ++++ +L+  S   + + G + +  ++K  +N++     
Sbjct: 585 MGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEG-KFYFDMMKRAHNISPGLEH 643

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIH--NEL 541
            + ++   G+ G + + + +   M  +     W +++S   IH  NEL
Sbjct: 644 FSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNEL 691



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 209/458 (45%), Gaps = 51/458 (11%)

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI-GAFADSEALVSEAVKYYLD 449
           +V   N +L+ YA  G LS  +++F  MP  D  SWN+++ G F   + LVS  ++ +L 
Sbjct: 70  NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVS--LETFLS 127

Query: 450 MRRAGWS-PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
           M R+G S PN  T    + +  +     L  Q+ A V K++  +++ +  AL+  + +CG
Sbjct: 128 MHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCG 187

Query: 509 EMDDCEKIFARMSE------------------------------RRDEVSWNSMISGYIH 538
            +D   ++F R+ E                               RD VSWN M+S    
Sbjct: 188 AVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQ 247

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
           +  + +A+++V  M  +G RLD  T+ + L+ACA +++L  G ++HA  +R     D  +
Sbjct: 248 SGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYV 307

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            SALV++Y+K G    A   F+ +  RN  +W  +ISG+ ++G   +++ LF+QM+ +  
Sbjct: 308 ASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELM 367

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
             D      ++S C     +  G +   S+    G I  +   + ++ +  +   L   E
Sbjct: 368 TLDQFALATLISGCCSRMDLCLG-RQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAE 426

Query: 719 ---EFINKMPITPNSLIWRTVLGACCRANCRKTELGR--KAANMLFEMEPQNAVNYVLLA 773
               F+N+  I      W +++ A        +++G   KA      M  +N + +  + 
Sbjct: 427 AIFRFMNEKDIVS----WTSMITA-------YSQVGNVAKAREFFDGMSEKNVITWNAML 475

Query: 774 NMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
             Y   G  ED  +  K M   E  +    ++VT+  G
Sbjct: 476 GAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKG 513


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 299/888 (33%), Positives = 465/888 (52%), Gaps = 79/888 (8%)

Query: 104 FKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS 163
              G +VH  + KS       + ++L+ MY  C    D A+  F+ +  +D ++W  +I 
Sbjct: 14  LDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLID-AKACFDRMPVQDALTWARLIR 72

Query: 164 VYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILA 220
            + Q GD+     LF  MQ EG    + P    F +++ A  +       LL++   I  
Sbjct: 73  AHGQIGDSEQALHLFRSMQLEG----VAPVNRNFVAVLGACSAD----PELLEEGRRIHG 124

Query: 221 MVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG------------- 267
           +++   + SD YV + L+  + +  +   ARK+F+ +  K VV  N              
Sbjct: 125 VLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQ 184

Query: 268 --------LMEG----------------RRKGKEV------------HGYLIRSGLFDMV 291
                   L+EG                + K  EV            H +L  S      
Sbjct: 185 AIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF---- 240

Query: 292 AVGNGLVNMYAKCGTIDDS-RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
                LVN Y  CG ++ + R+  R  +  + +    MI+   Q   ++EA+  F  M  
Sbjct: 241 --ATALVNFYGSCGDLEQAFRAFSRHRL--ELILATAMITQYTQRERWDEALELFKVMLL 296

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
           +G+     + ++ L++C+    +  G+ IHG   ++  D  V+  NAL+++Y   G L  
Sbjct: 297 EGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEE 356

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA-AA 469
            ++VF  M   D +SWN++I A     +   EA+     M+  G   + ++F+N L   A
Sbjct: 357 AVEVFRSMQHRDVISWNTIIAAHG-QHSQHPEALHLLHLMQLDGVKADKISFVNALPLCA 415

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
           +S ++ K G  +H+ +++  +  +  ++NA+L  YG C   DD  ++F R  + RD+VSW
Sbjct: 416 TSEALAK-GRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVF-RAMKVRDQVSW 473

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQ-RGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           N+MI+ Y     L     L++  MQ  G   D  +F   LSACA+ A+L  G  +H    
Sbjct: 474 NAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIR 533

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
              LE ++ + +A+++MY+K G +  A + F  MP+ +V SWN MIS +A+HGH D+ L 
Sbjct: 534 ETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLR 593

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI-PQLEQFSCMVDL 707
            F +M  +G LP+ VTFV V+SACSH GLV +G + F S+   +  I P+ E + CMVDL
Sbjct: 594 FFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDL 653

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAV 767
           + RAG+LD  E+FI   P+ P+ +I  T+LGA      +  E  RK+A  L E+ P  + 
Sbjct: 654 IARAGKLDAAEKFIAAAPLKPDRVIHSTMLGAS--KVHKDVERARKSAEHLMELTPDRSA 711

Query: 768 NYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDL 827
            YV+L+N+Y   GK ++ AK R+ M E  ++KE   S + +K  VH F  GD ++     
Sbjct: 712 AYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPE 771

Query: 828 IYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIR 886
           I E+L+ L+ +M  AGY P T   L D+  E K+ L+SYHSEK+A+AF L   +    +R
Sbjct: 772 ILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLR 831

Query: 887 IMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           I+KNLRVCGDCH+A KFISKI GREIV+RDS+RFHHF++G CSCGDYW
Sbjct: 832 IIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 193/727 (26%), Positives = 344/727 (47%), Gaps = 61/727 (8%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H +I K       F+ + L+ +YV  G L  A   FD MP +++++WA ++  +   
Sbjct: 18  KEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHGQI 77

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G S +A  +F+ M   G         +VL AC    P   + G ++H ++  +    D  
Sbjct: 78  GDSEQALHLFRSMQLEGVAPVNRNFVAVLGACS-ADPELLEEGRRIHGVLRGTAMESDHY 136

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           VS  L+ MYG C  S + AR++F+ I  + ++ WN++I+ Y+Q+       ++F  M  E
Sbjct: 137 VSTTLLHMYGKC-SSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLE 195

Query: 185 GFR------------------------YSLKPNEYTFGSLITAAYSSVLSGSY----LLQ 216
           G +                          L   E     L  +++++ L   Y     L+
Sbjct: 196 GVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLE 255

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV--------VSMNGL 268
           Q      +  L  +L + +A+++ + +   +  A ++F+ M+ + V          +N  
Sbjct: 256 QAFRAFSRHRL--ELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNAC 313

Query: 269 M--EGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
               G  +G+ +HG++ R   FD  V  GN L+NMY KCG+++++  VFR M  +D +SW
Sbjct: 314 SGPRGLEEGRIIHGFM-REIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISW 372

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           NT+I+   Q+  + EA+     M+ DG+ +   S ++ L  CA+   +  G+ IH   ++
Sbjct: 373 NTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVE 432

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G+ +DV + NA+L +Y          +VF  M   DQVSWN++I A+A    L SEA+ 
Sbjct: 433 SGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALL 492

Query: 446 YYLDMRRAGWSPNGVTFI---NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
            +  M+  G+ P+ ++F+   +  AA +S + GKL   +H ++ +  + +  T+ NA+L+
Sbjct: 493 LFQQMQLHGFMPDVISFVAALSACAAQASLAEGKL---LHDRIRETGLESNMTVANAVLN 549

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            Y K G +    K+F +M    D +SWN MIS +  +    + +     M   G+  +  
Sbjct: 550 MYAKSGTLVLARKMFGKMP-LPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDV 608

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA-----LVDMYSKCGRIDYASR 617
           TF +V+SAC+    ++ G+++    V    +F  +   A     +VD+ ++ G++D A +
Sbjct: 609 TFVSVVSACSHGGLVKDGVQLF---VSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEK 665

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC-SHAG 676
           F    P++     +S + G ++  H D      S   L    PD      VLS      G
Sbjct: 666 FIAAAPLKPDRVIHSTMLGASK-VHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVG 724

Query: 677 LVDEGFK 683
             DEG K
Sbjct: 725 KKDEGAK 731



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 1/119 (0%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +A +L   A   +L+ G EVHA   ++ ++    +G  LV MY  CG +  A   FD MP
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-HAGLVDEG 681
           V++  +W  +I  + + G  ++AL LF  M+L+G  P +  FV VL ACS    L++EG
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEG 119



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 52/98 (53%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + KL H +I + G   ++ + N ++N+Y + G L  A K+F +MP  + +SW  ++S + 
Sbjct: 524 EGKLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFA 583

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
             G +++  + F+ M   G L N     SV+ AC   G
Sbjct: 584 QHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGG 621


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 263/730 (36%), Positives = 397/730 (54%), Gaps = 65/730 (8%)

Query: 267 GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK---DSV 323
           G +   R G   HG +  +G    V V N LV MY++ G+++D+  VF  +  K   D +
Sbjct: 160 GELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVI 219

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAM------RRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
           SWN++++   +      A+  F  M      +     S   S+++ L +CASL  +   +
Sbjct: 220 SWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTK 279

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS- 436
           +IH   ++ G  +D  V NAL+  YA  G +   + VF +M   D VSWN+++  +  S 
Sbjct: 280 EIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSG 339

Query: 437 ------------------------EALVS---------EAVKYYLDMRRAGWSPNGVTFI 463
                                    A+++         EA+  +  M   G  PN VT I
Sbjct: 340 KFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTII 399

Query: 464 NILAAASSFSMGKLGHQVHAQVIK------------YNVANETTIENALLSCYGKCGEMD 511
           ++L+A +S      G + HA  +K                 +  + NAL+  Y KC    
Sbjct: 400 SLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFK 459

Query: 512 DCEKIFARMSER-RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL--DHFTFATVL 568
               IF  +  R R+ V+W  MI GY        A+ L   M+ +   +  + +T + +L
Sbjct: 460 AARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCIL 519

Query: 569 SACASVATLERGMEVHACGVRACLEFD---VVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
            ACA +++L  G ++HA   R   E++     + + L+DMYSKCG +D A   FD MP R
Sbjct: 520 MACAHLSSLRMGKQIHAYVTRH-HEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKR 578

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
           N  SW SM+SGY  HG G +AL +F +M+  G +PD ++F+ +L ACSH+G+VD+G  +F
Sbjct: 579 NEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYF 638

Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANC 745
             M   YG+I   + ++C++DLL R+G LDK  + I +MP+ P++ IW  +L A CR + 
Sbjct: 639 DIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSA-CRVH- 696

Query: 746 RKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSW 805
              EL   A N L  M+ +N  +Y L++N+YA+  +W+DVA+ R+ MK++ +KK  GCSW
Sbjct: 697 SNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSW 756

Query: 806 VTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVS 865
           V  K G   F  GD SHP    IY  L+ L  +++  GYVP+T FAL D++ E K +L++
Sbjct: 757 VQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLT 816

Query: 866 YHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFN 924
            HSEK+A+A+ +LT +   PIRI KNLRVCGDCHSAF +ISKIV  EI++RDS+RFHHF 
Sbjct: 817 EHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDHEIIVRDSSRFHHFK 876

Query: 925 DGKCSCGDYW 934
           +G CSCG YW
Sbjct: 877 NGSCSCGGYW 886



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 148/520 (28%), Positives = 233/520 (44%), Gaps = 90/520 (17%)

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           ++G G+V  Y  CG   D+ SV   ++   +V WN ++    + G  + AI   C M R 
Sbjct: 84  SLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRA 143

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G    +F+L   L +C  L     G   HG     G +S+V V NAL+++Y+ +G L   
Sbjct: 144 GTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDA 203

Query: 412 LKVFFLMPEH---DQVSWNSVIGA-------------FADSEALVSEAVKYYLDMRRAGW 455
             VF  +      D +SWNS++ A             F++   +V E        +    
Sbjct: 204 SLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHE--------KATNE 255

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
             + ++ +NIL A +S        ++H+  I+     +  + NAL+  Y KCG M D   
Sbjct: 256 RSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVN 315

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNL--------------VWFMM-----QRG 556
           +F  M E +D VSWN+M++GY  +     A  L               W  +     QRG
Sbjct: 316 VFNVM-EFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRG 374

Query: 557 ---QRLDHF-------------TFATVLSACASVATLERGMEVHACGVRACL-------- 592
              + LD F             T  ++LSACAS+  L +GME HA  ++ CL        
Sbjct: 375 YGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFG 434

Query: 593 ----EFDVVIGSALVDMYSKCGRIDYASRFFDLMP--VRNVYSWNSMISGYARHGHGDKA 646
                 D+V+ +AL+DMYSKC     A   F+ +P   RNV +W  MI GYA++G  + A
Sbjct: 435 GDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDA 494

Query: 647 LTLFSQM--KLDGPLPDHVTFVGVLSACSHAGLVDEG-------FKHFKSMSQVYGLIPQ 697
           L LFS+M  K     P+  T   +L AC+H   +  G        +H +  S VY +   
Sbjct: 495 LKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVA-- 552

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
               +C++D+  + G++D      + MP   N + W +++
Sbjct: 553 ----NCLIDMYSKCGDVDTARNVFDSMP-KRNEVSWTSMM 587



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 179/688 (26%), Positives = 311/688 (45%), Gaps = 94/688 (13%)

Query: 14  HGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKM 73
           H +     L   ++  Y+  G  + A  + + +    +V W  +V  +  +G  + A  +
Sbjct: 77  HSYVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGV 136

Query: 74  FKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY 133
              M+RAG   + + L   L+AC E  PS ++ G   H L+  +    +  V N L+AMY
Sbjct: 137 SCRMLRAGTKPDHFTLPYALKACGEL-PS-YRSGSAFHGLICCNGFESNVFVCNALVAMY 194

Query: 134 GSCLESTDCARRIFEEIETR---DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSL 190
                  D A  +F+EI  +   D+ISWNSI++ + +  +  +   LFS M      +  
Sbjct: 195 SRSGSLED-ASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTT--IVHEK 251

Query: 191 KPNEYTFGSLITAAYSSVLSGSYLLQ--QILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
             NE +    I     +  S   L Q  +I +   + G  +D +V +AL+  +A+ G+  
Sbjct: 252 ATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMK 311

Query: 249 YARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
            A  +F  M  K+VVS N ++ G                             Y + G   
Sbjct: 312 DAVNVFNVMEFKDVVSWNAMVTG-----------------------------YTQSGKFG 342

Query: 309 DSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
            +  +F+ M    I  D ++W+ +I+G  Q G  +EA+  F  M   G   ++ ++IS L
Sbjct: 343 AAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLL 402

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDS------------DVSVSNALLSLYADAGYLSRCL 412
           S+CASLG +  G + H   LK  L S            D+ V NAL+ +Y+         
Sbjct: 403 SACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAAR 462

Query: 413 KVFFLMP--EHDQVSWNSVIGAFA---DSEALVSEAVKYYLDM--RRAGWSPNGVTFINI 465
            +F  +P  E + V+W  +IG +A   DS    ++A+K + +M  +    +PN  T   I
Sbjct: 463 TIFNSIPRRERNVVTWTVMIGGYAQYGDS----NDALKLFSEMISKPYAVAPNAYTISCI 518

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETT--IENALLSCYGKCGEMDDCEKIFARMSER 523
           L A +  S  ++G Q+HA V +++    +   + N L+  Y KCG++D    +F  M  +
Sbjct: 519 LMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSM-PK 577

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
           R+EVSW SM+SGY  +    +A+++   M + G   D  +F  +L AC+    +++G++ 
Sbjct: 578 RNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDY 637

Query: 584 HACGVRACLEFDV------VIGSA-----LVDMYSKCGRIDYASRFFDLMPVRNVYS-WN 631
                     FD+      VI SA     ++D+ ++ GR+D A +    MP+    + W 
Sbjct: 638 ----------FDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWV 687

Query: 632 SMISGYARHGH---GDKALTLFSQMKLD 656
           +++S    H +    + AL     MK +
Sbjct: 688 ALLSACRVHSNVELAEYALNKLVSMKAE 715



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 141/586 (24%), Positives = 253/586 (43%), Gaps = 84/586 (14%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR---NSVSWACIV 58
           +    FH  I  +GF  +VF+CN L+ +Y R G L  AS +FDE+  +   + +SW  IV
Sbjct: 166 RSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIV 225

Query: 59  SGYTHKGMSNEACKMFKEM---VRAGFLLNRYALGSVLRACQECGP-SGFKFGMQVHCLV 114
           + +        A  +F EM   V       R  + S++     C          ++H   
Sbjct: 226 AAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYA 285

Query: 115 LKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISV 174
           +++    D  V N LI  Y  C    D A  +F  +E +D++SWN++++ Y+Q G   + 
Sbjct: 286 IRNGTFADAFVCNALIDTYAKCGSMKD-AVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAA 344

Query: 175 FKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVG 234
           F+LF  M++E                                             D+   
Sbjct: 345 FELFKNMRKENIPL-----------------------------------------DVITW 363

Query: 235 SALVSGFARLGNFYYARKIFEQMI----QKNVVSMNGLME------GRRKGKEVHGYLIR 284
           SA+++G+A+ G    A   F+QMI    + N V++  L+          +G E H Y ++
Sbjct: 364 SAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLK 423

Query: 285 SGLFDM------------VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS--VSWNTMIS 330
             L  +            + V N L++MY+KC +   +R++F  +  ++   V+W  MI 
Sbjct: 424 KCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIG 483

Query: 331 GLDQNGCYEEAIMNFCAM--RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG- 387
           G  Q G   +A+  F  M  +   +  + +++   L +CA L  + +G+QIH    +   
Sbjct: 484 GYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHE 543

Query: 388 LDSDVS-VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
            +S V  V+N L+ +Y+  G +     VF  MP+ ++VSW S++  +        EA+  
Sbjct: 544 YESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYG-MHGRGKEALDI 602

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTIENALLSCY 504
           +  M++AG+ P+ ++F+ +L A S   M   G   +  +++  Y V         ++   
Sbjct: 603 FDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLD-YFDIMRSDYGVIASAQHYACVIDLL 661

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHN--ELLPKAMN 547
            + G +D   K    M        W +++S   +H+  EL   A+N
Sbjct: 662 ARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALN 707



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 130/552 (23%), Positives = 224/552 (40%), Gaps = 114/552 (20%)

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           S  S+   +++ Y   G  S  L V   +     V WN ++ A  + E  +  A+     
Sbjct: 81  SPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIE-EGRLDRAIGVSCR 139

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M RAG  P+  T    L A       + G   H  +      +   + NAL++ Y + G 
Sbjct: 140 MLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGS 199

Query: 510 MDDCEKIFARMSER--RDEVSWNSMISGYIHNELLPKAMNLVWFMMQ------RGQRLDH 561
           ++D   +F  ++ +   D +SWNS+++ ++       A++L   M          +R D 
Sbjct: 200 LEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDI 259

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
            +   +L ACAS+  L +  E+H+  +R     D  + +AL+D Y+KCG +  A   F++
Sbjct: 260 ISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNV 319

Query: 622 MPVRNVYSWNSM-----------------------------------ISGYARHGHGDKA 646
           M  ++V SWN+M                                   I+GYA+ G+G +A
Sbjct: 320 MEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEA 379

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF------------------------ 682
           L  F QM L G  P+ VT + +LSAC+  G + +G                         
Sbjct: 380 LDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDG 439

Query: 683 ----------------KHFKSMSQVYGLIPQLEQ----FSCMVDLLGRAGE----LDKIE 718
                           + FK+   ++  IP+ E+    ++ M+    + G+    L    
Sbjct: 440 EDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFS 499

Query: 719 EFINK-MPITPNSLIWRTVLGACCRANCRKTELGRKA-ANMLFEMEPQNAVNYVL--LAN 774
           E I+K   + PN+     +L AC  A+     +G++  A +    E +++V +V   L +
Sbjct: 500 EMISKPYAVAPNAYTISCILMAC--AHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLID 557

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           MY+  G   DV  AR        + E   SW +M  G  +   G E+            +
Sbjct: 558 MYSKCG---DVDTARNVFDSMPKRNEV--SWTSMMSGYGMHGRGKEA-----------LD 601

Query: 835 LNQKMRDAGYVP 846
           +  KM+ AG+VP
Sbjct: 602 IFDKMQKAGFVP 613


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 264/720 (36%), Positives = 389/720 (54%), Gaps = 76/720 (10%)

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
           LVS +A  G+    R++F+ M +KNV                  YL            N 
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEKKNV------------------YL-----------WNF 32

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGK--------------------DSVSWNTMISGLDQNG 336
           +V+ YAK G   +S  +F+ M+ K                    D +SWN+MISG   NG
Sbjct: 33  MVSEYAKIGDFKESICLFKIMVEKGIEGKRSESASELFDKLCDRDVISWNSMISGYVSNG 92

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
             E  +  +  M   G+     ++IS L  CA  G + LG+ +H   +K   +  ++ SN
Sbjct: 93  LTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSN 152

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
            LL +Y+  G L   L+VF  M E + VSW S+I  +   +     A+     M + G  
Sbjct: 153 TLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT-RDGWSDGAIILLQQMEKEGVK 211

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
            + V   +IL A +       G  VH  +   N+A+   + NAL+  Y KCG M+    +
Sbjct: 212 LDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSV 271

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F+ M   +D +SWN+M+      EL P                D  T A +L ACAS++ 
Sbjct: 272 FSTMV-VKDIISWNTMVG-----ELKP----------------DSRTMACILPACASLSA 309

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           LERG E+H   +R     D  + +ALVD+Y KCG +  A   FD++P +++ SW  MI+G
Sbjct: 310 LERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAG 369

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           Y  HG+G++A+  F++M+  G  PD V+F+ +L ACSH+GL+++G++ F  M   + + P
Sbjct: 370 YGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEP 429

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAAN 756
           +LE ++CMVDLL R G L K  +FI  +PI P++ IW  +L  C        EL  K A 
Sbjct: 430 KLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGC--RIYHDIELAEKVAE 487

Query: 757 MLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV 816
            +FE+EP+N   YVLLAN+YA   KWE+V + R+ + +  ++K  GCSW+ +K  V++FV
Sbjct: 488 RVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFV 547

Query: 817 AGDE-SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
           +G+  SHP    I   LK++ +KM++ GY P+TK+AL + +   KE  +  HSEK+A+AF
Sbjct: 548 SGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAF 607

Query: 876 -VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            +LT   +  IR+ KNLRVCGDCH   KF+SK   REIVLRDSNRFHHF DG CSC  +W
Sbjct: 608 GLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 667



 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 219/455 (48%), Gaps = 53/455 (11%)

Query: 19  DVFLCNTLINVYVRVGDLA--------------------SASKLFDEMPDRNSVSWACIV 58
           +V+L N +++ Y ++GD                      SAS+LFD++ DR+ +SW  ++
Sbjct: 26  NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRSESASELFDKLCDRDVISWNSMI 85

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
           SGY   G++     ++K+M+  G  ++   + SVL  C + G      G  VH L +KS+
Sbjct: 86  SGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGT--LSLGKAVHSLAIKSS 143

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
                  SN L+ MY  C +  D A R+FE++  R+++SW S+I+ Y++ G +     L 
Sbjct: 144 FERRINFSNTLLDMYSKCGD-LDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILL 202

Query: 179 SRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
            +M++EG    +K +     S++ A A S  L      + +   +K   + S+L+V +AL
Sbjct: 203 QQMEKEG----VKLDVVAITSILHACARSGSLDNG---KDVHDYIKANNMASNLFVCNAL 255

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGL--------------------MEGRRKGKE 277
           +  +A+ G+   A  +F  M+ K+++S N +                    +    +GKE
Sbjct: 256 MDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKE 315

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +HGY++R+G      V N LV++Y KCG +  +R +F  +  KD VSW  MI+G   +G 
Sbjct: 316 IHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGY 375

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IHGEGLKLGLDSDVSVSN 396
             EAI  F  MR  G+     S IS L +C+  G +  G +  +       ++  +    
Sbjct: 376 GNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYA 435

Query: 397 ALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI 430
            ++ L +  G LS+  K    +P   D   W +++
Sbjct: 436 CMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 470



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 130/523 (24%), Positives = 239/523 (45%), Gaps = 67/523 (12%)

Query: 129 LIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD---TISVFKLFSRMQREG 185
           L++ Y +C +  +  RR+F+ +E +++  WN ++S Y++ GD   +I +FK+      EG
Sbjct: 2   LVSFYATCGDLKE-GRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 60

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
            R                      S S L  ++           D+   ++++SG+   G
Sbjct: 61  KRSE--------------------SASELFDKLCD--------RDVISWNSMISGYVSNG 92

Query: 246 NFYYARKIFEQM----IQKNVVSMNGLMEGRRK------GKEVHGYLIRSGLFDMVAVGN 295
                  I++QM    I  ++ ++  ++ G  K      GK VH   I+S     +   N
Sbjct: 93  LTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSN 152

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMS 355
            L++MY+KCG +D +  VF  M  ++ VSW +MI+G  ++G  + AI+    M ++G+  
Sbjct: 153 TLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKL 212

Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
              ++ S L +CA  G +  G+ +H       + S++ V NAL+ +YA  G +     VF
Sbjct: 213 DVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVF 272

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
             M   D +SWN+++G                         P+  T   IL A +S S  
Sbjct: 273 STMVVKDIISWNTMVGEL----------------------KPDSRTMACILPACASLSAL 310

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           + G ++H  +++   +++  + NAL+  Y KCG +     +F  M   +D VSW  MI+G
Sbjct: 311 ERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLF-DMIPSKDLVSWTVMIAG 369

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-VHACGVRACLEF 594
           Y  +    +A+     M   G   D  +F ++L AC+    LE+G    +       +E 
Sbjct: 370 YGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEP 429

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSMISG 636
            +   + +VD+ S+ G +  A +F + +P+  +   W +++ G
Sbjct: 430 KLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 472



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 132/278 (47%), Gaps = 34/278 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H   +K  F   +   NTL+++Y + GDL  A ++F++M +RN VSW  +++GYT 
Sbjct: 132 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 191

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G S+ A  + ++M + G  L+  A+ S+L AC   G      G  VH  +  +N   + 
Sbjct: 192 DGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGS--LDNGKDVHDYIKANNMASNL 249

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V N L+ MY  C  S + A  +F  +  +D+ISWN+++                     
Sbjct: 250 FVCNALMDMYAKC-GSMEGANSVFSTMVVKDIISWNTMVG-------------------- 288

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
                 LKP+  T   ++ A  S  LS     ++I   + + G  SD +V +ALV  + +
Sbjct: 289 -----ELKPDSRTMACILPACAS--LSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 341

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY 281
            G    AR +F+ +  K++VS   ++ G      +HGY
Sbjct: 342 CGVLGLARLLFDMIPSKDLVSWTVMIAGY----GMHGY 375



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 147/344 (42%), Gaps = 44/344 (12%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H  I  +  A ++F+CN L+++Y + G +  A+ +F  M  ++ +SW  +V G  
Sbjct: 232 NGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV-GEL 290

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                  AC                    +L AC     S  + G ++H  +L++  + D
Sbjct: 291 KPDSRTMAC--------------------ILPACASL--SALERGKEIHGYILRNGYSSD 328

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V+N L+ +Y  C      AR +F+ I ++DL+SW  +I+ Y   G        F+ M+
Sbjct: 329 RHVANALVDLYVKC-GVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMR 387

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ----ILAMVKKAGLLSDLYVGSALV 238
             G    ++P+E +F S++ A      S S LL+Q       M     +   L   + +V
Sbjct: 388 DAG----IEPDEVSFISILYAC-----SHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMV 438

Query: 239 SGFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG 296
              +R GN   A K  E + I  +      L+ G R   ++     +   +F++     G
Sbjct: 439 DLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTG 498

Query: 297 ----LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
               L N+YA+    ++ + + R  IGK  +  N   S ++  G
Sbjct: 499 YYVLLANIYAEAEKWEEVKRM-REKIGKKGLRKNPGCSWIEIKG 541


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  457 bits (1177), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 274/788 (34%), Positives = 424/788 (53%), Gaps = 65/788 (8%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A ++++E+  ++ +S N++IS Y + GD  S   LF  M          P+        T
Sbjct: 63  ALKVYDEMPHKNTVSTNTMISGYVKMGDLSSARHLFDAM----------PDR-------T 105

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ--- 259
               ++L G Y                            A   +F  A K+F QM +   
Sbjct: 106 VVTWTILMGWY----------------------------AGNNHFDEAFKLFRQMCRSCT 137

Query: 260 -KNVVSMNGLMEG------RRKGKEVHGYLIRSGLFD---MVAVGNGLVNMYAKCGTIDD 309
             + V+   L+ G      +    +VH + ++ G FD    + V N L+  Y +   +D 
Sbjct: 138 LPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLG-FDTNLFLTVCNVLLKSYCEVRRLDL 196

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +  +F  ++ KDSV++NT+I+G +++G Y EAI  F  MR+ G   S+F+    L +   
Sbjct: 197 ACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVG 256

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           L    LGQQ+HG  +  G   D SV N +L  Y+    +     +F  MPE D VS+N V
Sbjct: 257 LHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVV 316

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           I +++ +E    E++  + +M+  G+      F  +L+ A++ S  ++G QVH Q I   
Sbjct: 317 ISSYSQAEQY-EESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVAT 375

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV 549
             +   + N+L+  Y KC   D+ E IF  +S+R   VSW ++ISGY+   L    + L 
Sbjct: 376 ADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQR-STVSWTALISGYVQKGLHGAGLKLF 434

Query: 550 WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
             M     R D  TFATVL A A  A+L  G ++HA  +R+    +V  GS LVDMY+KC
Sbjct: 435 TKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKC 494

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
           G I  A + F+ MP RN  SWN++IS YA +G G+ A+  F++M   G  PD V+ +GVL
Sbjct: 495 GSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVL 554

Query: 670 SACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPN 729
            ACSH G V++G + F++MS +YG+ P+ + ++CM+DLLGR G   + E+ +++MP  P+
Sbjct: 555 IACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPD 614

Query: 730 SLIWRTVLGACCRANCRKTELGRKAANMLFEMEP-QNAVNYVLLANMYASGGKWEDVAKA 788
            ++W +VL AC     +   L  +AA  LF ME  ++A  YV ++N+YA+ GKWE+V   
Sbjct: 615 EIMWSSVLNAC--RIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHV 672

Query: 789 RKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQT 848
           +KAM+E  +KK    SWV +   +HVF + D++HP  D I +K+ EL  ++   GY P T
Sbjct: 673 KKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEIEREGYKPDT 732

Query: 849 KFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKI 907
              + D++ + K + + YHSE++AVAF L    +  PI +MKNLR C DCH+A K ISKI
Sbjct: 733 SSVVQDIDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKI 792

Query: 908 VGREIVLR 915
           V R I  +
Sbjct: 793 VKRVITTQ 800



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 153/561 (27%), Positives = 264/561 (47%), Gaps = 64/561 (11%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           NT+I+ YV++GDL+SA  LFD MPDR  V+W  ++  Y      +EA K+F++M R+  L
Sbjct: 79  NTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTL 138

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG----LVSNVLIAMYGSCLES 139
            +     ++L  C +  P     G QVH   +K    FD      V NVL+  Y   +  
Sbjct: 139 PDYVTFTTLLPGCNDAVPQN-AVG-QVHAFAVKLG--FDTNLFLTVCNVLLKSYCE-VRR 193

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
            D A  +FEEI  +D +++N++I+ Y + G       LF +M++ G     KP+++TF  
Sbjct: 194 LDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGH----KPSDFTFSG 249

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           ++ A     L    L QQ+  +    G   D  VG+ ++  +++       R +F +M +
Sbjct: 250 VLKAVVG--LHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPE 307

Query: 260 KNVVSMNGLMEG-----------------------RRK------------------GKEV 278
            + VS N ++                         RR                   G++V
Sbjct: 308 LDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQV 367

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H   I +    ++ VGN LV+MYAKC   D++  +F+ +  + +VSW  +ISG  Q G +
Sbjct: 368 HCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLH 427

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
              +  F  MR   L +   +  + L + A    ++LG+Q+H   ++ G   +V   + L
Sbjct: 428 GAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGL 487

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS---EALVSEAVKYYLDMRRAGW 455
           + +YA  G +   ++VF  MP+ + VSWN++I A+AD+   EA    A+  +  M ++G 
Sbjct: 488 VDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEA----AIGAFTKMIQSGL 543

Query: 456 SPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
            P+ V+ + +L A S     + G +   A    Y +  +      +L   G+ G   + E
Sbjct: 544 QPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAE 603

Query: 515 KIFARMSERRDEVSWNSMISG 535
           K+   M    DE+ W+S+++ 
Sbjct: 604 KLMDEMPFEPDEIMWSSVLNA 624



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 236/512 (46%), Gaps = 62/512 (12%)

Query: 8   HLQILKHGFAYDVFL--CNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           H   +K GF  ++FL  CN L+  Y  V  L  A  LF+E+ D++SV++  +++GY   G
Sbjct: 164 HAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDG 223

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
           +  EA  +F +M ++G   + +    VL+A    G   F  G Q+H L + +  + D  V
Sbjct: 224 LYTEAIHLFLKMRQSGHKPSDFTFSGVLKAV--VGLHDFALGQQLHGLSVTTGFSRDASV 281

Query: 126 SNVLIAMYGS---CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            N ++  Y      LE+    R +F E+   D +S+N +IS YSQ         LF  MQ
Sbjct: 282 GNQILHFYSKHDRVLET----RNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQ 337

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             GF        + F ++++ A +  LS   + +Q+      A   S L+VG++LV  +A
Sbjct: 338 CMGF----DRRNFPFATMLSIAAN--LSSLQVGRQVHCQAIVATADSILHVGNSLVDMYA 391

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---------------------------- 274
           +   F  A  IF+ + Q++ VS   L+ G  +                            
Sbjct: 392 KCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFAT 451

Query: 275 -------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                        GK++H ++IRSG  + V  G+GLV+MYAKCG+I D+  VF  M  ++
Sbjct: 452 VLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRN 511

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IH 380
           +VSWN +IS    NG  E AI  F  M + GL   + S++  L +C+  G++  G +   
Sbjct: 512 AVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQ 571

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA--FADSE 437
                 G+         +L L    G  +   K+   MP E D++ W+SV+ A     ++
Sbjct: 572 AMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQ 631

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
           +L   A +    M +   +   V+  NI AAA
Sbjct: 632 SLAERAAEQLFSMEKLRDAAAYVSMSNIYAAA 663



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 55/96 (57%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  I++ G   +VF  + L+++Y + G +  A ++F+EMPDRN+VSW  ++S Y   
Sbjct: 466 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADN 525

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G    A   F +M+++G   +  ++  VL AC  CG
Sbjct: 526 GDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCG 561



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 42/97 (43%), Gaps = 31/97 (31%)

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGY--------ARH--------------------- 640
           G++  A + +D MP +N  S N+MISGY        ARH                     
Sbjct: 58  GQVSAALKVYDEMPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYA 117

Query: 641 --GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
              H D+A  LF QM     LPD+VTF  +L  C+ A
Sbjct: 118 GNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDA 154


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  457 bits (1177), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/673 (35%), Positives = 385/673 (57%), Gaps = 17/673 (2%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            K +HG+++++G    + V   LVN+Y +CG   D+R++F  M  K+ V+W  +I+G   
Sbjct: 97  AKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTL 156

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N     A+  F  M + G   S+++L   LS+C +   I LG+Q+HG  +K G  S  S+
Sbjct: 157 NSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSI 216

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            N+L  LY  +G L   ++ F  +P+ + ++W ++I A A+ E      +  +LDM +  
Sbjct: 217 GNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGE 276

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             PN  T  ++++   +     LG QV     K   A    ++N+ +  Y + GE ++  
Sbjct: 277 VMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAM 336

Query: 515 KIFARMSERRDEVSWNSMISGYIH------NELLPK-----AMNLVWFMMQRGQRLDHFT 563
           ++F  M E    ++WN+MISG+        ++L  +     A+ +   +++   + D FT
Sbjct: 337 RLFEEM-EDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFT 395

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           F+++LS C+++  LE+G ++HA  ++     DVV+ SALV+MY+KCG I+YA++ F  MP
Sbjct: 396 FSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMP 455

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            R + +W SMISGY++HG    A+ LF  M L G  P+ +TFV +LSACS+AGLV+E  +
Sbjct: 456 TRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMR 515

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
           +F  M   Y + P ++ + CM+D+  R G LD    FI +    PN  IW +++ A CR+
Sbjct: 516 YFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLV-AGCRS 574

Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
           +    EL   AA+ L E++P+    YVLL NMY S G+W DVA+ RK  K  ++      
Sbjct: 575 HG-NMELAFYAADRLLELKPKVVETYVLLLNMYISTGRWRDVARVRKLSKHEDLGILRDR 633

Query: 804 SWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDL 863
           SW+T++D V+ F A D SHP+   +Y+ L+ L +K +  GY P     L+D E + K   
Sbjct: 634 SWITIRDKVYFFKADDRSHPQSTELYQLLETLLEKAKAIGYEPYQNTELYDSEEDGKPAA 693

Query: 864 --VSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRF 920
             + +HSE++AVA  L +    + +RI KN+ +C DCHS+ KF S +  REIV+RDS R 
Sbjct: 694 GSLKHHSERLAVALGLLKAPPGVTVRITKNITMCRDCHSSIKFFSLLANREIVVRDSKRL 753

Query: 921 HHFNDGKCSCGDY 933
           H F DG+CSCGD+
Sbjct: 754 HKFKDGRCSCGDF 766



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 193/425 (45%), Gaps = 66/425 (15%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  ++K G   D+F+  +L+NVY+R G+   A  LFDEMP++N V+W  +++GYT 
Sbjct: 97  AKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTL 156

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                 A ++F EM++ G   + Y LG +L AC          G QVH   +K       
Sbjct: 157 NSQPVLALEVFVEMLKLGRYPSDYTLGGMLSAC--VASHNIDLGKQVHGYTIKYGAASIT 214

Query: 124 LVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISV-FKLFSR 180
            + N L  +Y     LES     R F+ I  +++I+W ++IS  ++  +   +   LF  
Sbjct: 215 SIGNSLCRLYTKSGNLES---GIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLD 271

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M     +  + PNE+T  S+++   +S+     L +Q+     K G  ++L V ++ +  
Sbjct: 272 M----LKGEVMPNEFTLTSVMSLCGTSL--DMNLGKQVQGFCFKIGCATNLPVKNSTMYL 325

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG--------------RRKG----------- 275
           + R G    A ++FE+M   +V++ N ++ G              R +G           
Sbjct: 326 YLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLV 385

Query: 276 ---------------------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
                                      +++H   I++G    V V + LVNMY KCG I+
Sbjct: 386 RSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIE 445

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
            +   F  M  +  V+W +MISG  Q+G   +AI  F  M   G   +  + +S LS+C+
Sbjct: 446 YATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACS 505

Query: 369 SLGWI 373
             G +
Sbjct: 506 YAGLV 510



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 105/454 (23%), Positives = 215/454 (47%), Gaps = 19/454 (4%)

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
           AM ++G    +   +  L  C   G +   + +HG  +K G   D+ V+ +L+++Y   G
Sbjct: 68  AMLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCG 127

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFA-DSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
                  +F  MPE + V+W ++I  +  +S+ ++  A++ +++M + G  P+  T   +
Sbjct: 128 NSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVL--ALEVFVEMLKLGRYPSDYTLGGM 185

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           L+A  +     LG QVH   IKY  A+ T+I N+L   Y K G ++   + F R+ + ++
Sbjct: 186 LSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPD-KN 244

Query: 526 EVSWNSMISGYIHNELLPK-AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
            ++W +MIS    +E   +  +NL   M++     + FT  +V+S C +   +  G +V 
Sbjct: 245 VITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQ 304

Query: 585 ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR----- 639
               +     ++ + ++ + +Y + G  + A R F+ M   +V +WN+MISG+A+     
Sbjct: 305 GFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSA 364

Query: 640 ------HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
                    G +AL +F  +      PD  TF  +LS CS    +++G +   + +   G
Sbjct: 365 KDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQG-EQIHAQTIKTG 423

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
            +  +   S +V++  + G ++   +   +MP T   + W +++    + + R  +  + 
Sbjct: 424 FLSDVVVNSALVNMYNKCGCIEYATKAFVEMP-TRTLVTWTSMISGYSQ-HGRPHDAIQL 481

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
             +M+      N + +V L +  +  G  E+  +
Sbjct: 482 FEDMILAGAKPNEITFVSLLSACSYAGLVEEAMR 515


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/576 (41%), Positives = 354/576 (61%), Gaps = 8/576 (1%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           + L  C  L  +  G+ IH   L      D+ + N LL+LYA  G L    K+F  M   
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL--GH 479
           D V+W ++I  ++  +    +A+    +M R G  PN  T  ++L AAS      +  G 
Sbjct: 80  DVVTWTALITGYSQHDR-PQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGR 138

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           Q+H   ++Y   +   +  A+L  Y +C  +++ + IF  M  + +EVSWN++I+GY   
Sbjct: 139 QLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSK-NEVSWNALIAGYARK 197

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
               KA  L   M++   +  HFT+++VL ACAS+ +LE+G  VHA  ++   +    +G
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG 257

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           + L+DMY+K G I+ A + FD +  R+V SWNSM++GY++HG G  AL  F +M      
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIA 317

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           P+ +TF+ VL+ACSHAGL+DEG +H+  M + Y + PQ+  +  MVDLLGRAG LD+  +
Sbjct: 318 PNDITFLCVLTACSHAGLLDEG-RHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQ 376

Query: 720 FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASG 779
           FI++MPI P + +W  +LGA CR + +  ELG  AA  +FE++      +VLL N+YA  
Sbjct: 377 FISEMPIKPTAAVWGALLGA-CRMH-KNMELGGYAAECIFELDSHYPGTHVLLYNIYALA 434

Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
           G+W D AK RK MKE+ VKKE  CSWV M++ VHVFVA D++HP++  I+   ++++ K+
Sbjct: 435 GRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKI 494

Query: 840 RDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCH 898
           ++ GYVP +   L  ++ + +E  + YHSEK+A+AF L        IRI KN+R+CGDCH
Sbjct: 495 KEIGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCH 554

Query: 899 SAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           SAFKF+SK+V REI++RD+NRFHHF DG CSC DYW
Sbjct: 555 SAFKFVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 206/394 (52%), Gaps = 10/394 (2%)

Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
           AR+I   ++ K    +N L EG    K +H  L+ S   D + + N L+N+YAKCG +  
Sbjct: 14  AREICHTLL-KRCTHLNKLNEG----KIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVY 68

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +R +F  M  +D V+W  +I+G  Q+   ++A++    M R GL  + F+L S L + + 
Sbjct: 69  ARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASG 128

Query: 370 LGW--IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
           +G   ++ G+Q+HG  L+ G DS+V VS A+L +YA   +L     +F +M   ++VSWN
Sbjct: 129 VGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWN 188

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           ++I  +A  +    +A   + +M R    P   T+ ++L A +S    + G  VHA +IK
Sbjct: 189 ALIAGYA-RKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIK 247

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
           +       + N LL  Y K G ++D +K+F R++ +RD VSWNSM++GY  + L   A+ 
Sbjct: 248 WGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLA-KRDVVSWNSMLTGYSQHGLGKVALQ 306

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
               M++     +  TF  VL+AC+    L+ G        +  +E  +     +VD+  
Sbjct: 307 RFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLG 366

Query: 608 KCGRIDYASRFFDLMPVRNVYS-WNSMISGYARH 640
           + G +D A +F   MP++   + W +++     H
Sbjct: 367 RAGHLDRAIQFISEMPIKPTAAVWGALLGACRMH 400



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 154/271 (56%), Gaps = 11/271 (4%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K+ H  +L   F  D+ + NTL+N+Y + GDL  A KLFDEM  R+ V+W  +++GY+
Sbjct: 33  EGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYS 92

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                 +A  +  EM+R G   N++ L S+L+A    G +    G Q+H L L+     +
Sbjct: 93  QHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSN 152

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             VS  ++ MY  C    + A+ IF+ + +++ +SWN++I+ Y+++G     F LFS M 
Sbjct: 153 VYVSCAILDMYARC-HHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNML 211

Query: 183 REGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           RE    ++KP  +T+ S++ A  S  S+  G +    + A++ K G     +VG+ L+  
Sbjct: 212 RE----NVKPTHFTYSSVLCACASMGSLEQGKW----VHALMIKWGEKLVAFVGNTLLDM 263

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           +A+ G+   A+K+F+++ +++VVS N ++ G
Sbjct: 264 YAKSGSIEDAKKVFDRLAKRDVVSWNSMLTG 294



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 171/359 (47%), Gaps = 44/359 (12%)

Query: 218 ILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK--- 274
           I A++  +    DL + + L++ +A+ G+  YARK+F++M  ++VV+   L+ G  +   
Sbjct: 37  IHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDR 96

Query: 275 ----------------------------------------GKEVHGYLIRSGLFDMVAVG 294
                                                   G+++HG  +R G    V V 
Sbjct: 97  PQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVS 156

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
             +++MYA+C  +++++ +F  M+ K+ VSWN +I+G  + G  ++A   F  M R+ + 
Sbjct: 157 CAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVK 216

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
            ++F+  S L +CAS+G +  G+ +H   +K G      V N LL +YA +G +    KV
Sbjct: 217 PTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKV 276

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  + + D VSWNS++  ++    L   A++ + +M R   +PN +TF+ +L A S   +
Sbjct: 277 FDRLAKRDVVSWNSMLTGYS-QHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGL 335

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
              G      + KYNV  + +    ++   G+ G +D   +  + M  +     W +++
Sbjct: 336 LDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALL 394



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 152/321 (47%), Gaps = 19/321 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H   L++G+  +V++   ++++Y R   L  A  +FD M  +N VSW  +++GY  K
Sbjct: 138 RQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARK 197

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G  ++A  +F  M+R       +   SVL AC   G    + G  VH L++K  +     
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMG--SLEQGKWVHALMIKWGEKLVAF 255

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V N L+ MY       D A+++F+ +  RD++SWNS+++ YSQ G      + F  M   
Sbjct: 256 VGNTLLDMYAKSGSIED-AKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEM--- 311

Query: 185 GFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
             R  + PN+ TF  ++TA +++ +L      +    M+KK  +   +     +V    R
Sbjct: 312 -LRTRIAPNDITFLCVLTACSHAGLLDEG---RHYFDMMKKYNVEPQISHYVTMVDLLGR 367

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGR---RKGKEVHGYLIRSGLFDMVAVGNG---- 296
            G+   A +   +M  K   ++ G + G     K  E+ GY     +F++ +   G    
Sbjct: 368 AGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAEC-IFELDSHYPGTHVL 426

Query: 297 LVNMYAKCGTIDDSRSVFRFM 317
           L N+YA  G  +D+  V + M
Sbjct: 427 LYNIYALAGRWNDAAKVRKMM 447



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 52/99 (52%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K G     F+ NTL+++Y + G +  A K+FD +  R+ VSW  +++GY
Sbjct: 236 EQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGY 295

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           +  G+   A + F+EM+R     N      VL AC   G
Sbjct: 296 SQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAG 334


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 272/842 (32%), Positives = 443/842 (52%), Gaps = 82/842 (9%)

Query: 127 NVLIAMYG--SCLESTDCARRIFEEIETRDL----ISWNSIISVYSQRGDTISVFKLFSR 180
           + LIA+    SCL +    RRI  +I  RD     +  N++IS+YS+ G  I   + F R
Sbjct: 8   HALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDR 67

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           + R   R                                          D+   +A++S 
Sbjct: 68  LPRASKR------------------------------------------DVVTWNAMISA 85

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGL-------------MEGRRKGKEVHGYLIRSGL 287
           F R G+   A ++F  M        N +             +      + +HG ++ +G+
Sbjct: 86  FLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGI 145

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS----VSWNTMISGLDQNGCYEEAIM 343
                V   LV+ Y K G++DD+  VF     ++     V+ + MIS   QNG  +E++ 
Sbjct: 146 EREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLR 205

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GLDSDVSVSNALLSLY 402
            F AM  +G   S  +L+S L++C+ L        +  + +++     D  +   LL+ Y
Sbjct: 206 LFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSATRDNVLGTTLLTTY 265

Query: 403 ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
           A +  LSR    F  +   D VSWN++  A+        EA+  +  M   G  P+  TF
Sbjct: 266 ARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHR-PREALVLFERMLLEGVRPSVATF 324

Query: 463 INILAAASSF---SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           I  L A +++   +   +G ++ + + +  +  +T + NA L+ Y KCG + D   +F R
Sbjct: 325 ITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFER 384

Query: 520 MSE-RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL---DHFTFATVLSACASVA 575
           +S  RRD ++WNSM++ Y H+ L  +A  L  F     ++L   +  TF  VL A  S  
Sbjct: 385 ISPTRRDCITWNSMLAAYGHHGLGKEAFEL--FQAMEAEKLVKPNKVTFVAVLDASTSRT 442

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV--RNVYSWNSM 633
           ++ +G E+HA  V    E D VI +AL++MY+KCG +D A   FD       +V +W S+
Sbjct: 443 SIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSL 502

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           ++GYA++G  ++AL LF  M+  G  P+H+TF+  L+AC+H G +++G +    M+  +G
Sbjct: 503 VAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHG 562

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           ++P  + FSC+VDLLGR G LD+ E+ + +     + + W  +L AC   N ++ E G +
Sbjct: 563 IVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDAC--KNSKELERGER 619

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
            A  + +++P+ A +Y++LA+MYA+ G+W + A  RK M +  ++ + GCS V +   +H
Sbjct: 620 CAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELH 679

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
            F AGD+SHP+ + IY +L+ L+  ++ AGYV  T   L D+  E KE L+  HSEK+A+
Sbjct: 680 SFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAI 739

Query: 874 AF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           AF +++  S  P+R++KNLRVC DCH+A K ISK+ GR+I++RDS+R+HHF  G CSCGD
Sbjct: 740 AFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGD 799

Query: 933 YW 934
           YW
Sbjct: 800 YW 801



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 165/613 (26%), Positives = 297/613 (48%), Gaps = 76/613 (12%)

Query: 85  NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCAR 144
           N +AL +++ AC   G      G ++H  +   +   + ++ N LI+MY  C    D A+
Sbjct: 6   NCHALIALVNACSCLG--NLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLID-AK 62

Query: 145 RIFEEIE---TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
           + F+ +     RD+++WN++IS + + G      +LF  M  +G   +  PN  TF S++
Sbjct: 63  QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDG---APPPNSVTFVSVL 119

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF----EQM 257
            +   + L     ++ I   +  AG+  + +V +ALV  + +LG+   A ++F    ++ 
Sbjct: 120 DSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEE 179

Query: 258 IQKNVVSMNGLM----------EGRR-------KGKEVHGYLIRSGL--FDMVAVGNG-- 296
              ++V+ + ++          E  R       +G +  G  + S L    M+ VG+   
Sbjct: 180 PSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATA 239

Query: 297 ---------------------LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
                                L+  YA+   +  +R+ F  +   D VSWN M +   Q+
Sbjct: 240 FVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQH 299

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG---WIMLGQQIHGEGLKLGLDSDV 392
               EA++ F  M  +G+  S  + I+ L++CA+        +G++I     + GL+ D 
Sbjct: 300 HRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDT 359

Query: 393 SVSNALLSLYADAGYLSRCLKVF-FLMP-EHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           +V+NA L++YA  G L+    VF  + P   D ++WNS++ A+     L  EA + +  M
Sbjct: 360 AVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGH-HGLGKEAFELFQAM 418

Query: 451 RRAGW-SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
                  PN VTF+ +L A++S +    G ++HA+V+     ++T I+NALL+ Y KCG 
Sbjct: 419 EAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGS 478

Query: 510 MDDCEKIFARMSERRDEV-SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
           +DD + IF + S  +++V +W S+++GY       +A+ L W M Q+G R +H TF + L
Sbjct: 479 LDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISAL 538

Query: 569 SACASVATLERGMEV-------HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
           +AC     LE+G E+       H   V A   F     S +VD+  +CGR+D A +  + 
Sbjct: 539 TACNHGGKLEQGCELLSGMTPDHGI-VPASKHF-----SCIVDLLGRCGRLDEAEKLLER 592

Query: 622 MPVRNVYSWNSMI 634
               +V +W +++
Sbjct: 593 TSQADVITWMALL 605



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 158/611 (25%), Positives = 278/611 (45%), Gaps = 72/611 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP---DRNSVSWACIVSGY 61
           +  H QI    F  +  L N LI++Y + G L  A + FD +P    R+ V+W  ++S +
Sbjct: 27  RRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAF 86

Query: 62  THKGMSNEACKMFKEMVRAGF-LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
              G + EA ++F++M   G    N     SVL +C E G    +    +H  ++ +   
Sbjct: 87  LRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIE 146

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIF----EEIETRDLISWNSIISVYSQRGDTISVFK 176
            +  V   L+  YG  L S D A  +F    +E  +  L++ +++IS   Q G      +
Sbjct: 147 REAFVRTALVDSYGK-LGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLR 205

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGS---YLLQQILAMVKKAGLLSDLYV 233
           LF  M  EG     KP+  T  S++ A  S +  GS   ++L+Q + +V       D  +
Sbjct: 206 LFYAMNLEG----TKPSGVTLVSVLNAC-SMLPVGSATAFVLEQAMEVVSAT---RDNVL 257

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG---------------------LMEGR 272
           G+ L++ +AR  +   AR  F+ +   +VVS N                      L+EG 
Sbjct: 258 GTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGV 317

Query: 273 RK-----------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
           R                        GK +   L  +GL    AV N  +NMYAKCG++ D
Sbjct: 318 RPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLAD 377

Query: 310 SRSVFRFM--IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSS 366
           +R+VF  +    +D ++WN+M++    +G  +EA   F AM  + L+  N  + ++ L +
Sbjct: 378 ARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDA 437

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP--EHDQV 424
             S   I  G++IH   +  G +SD  + NALL++YA  G L     +F      + D +
Sbjct: 438 STSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVI 497

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ-VHA 483
           +W S++  +A        A+K +  M++ G  PN +TFI+ L A +     + G + +  
Sbjct: 498 AWTSLVAGYAQY-GQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSG 556

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
               + +   +   + ++   G+CG +D+ EK+  R S+  D ++W +++    +++ L 
Sbjct: 557 MTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTSQ-ADVITWMALLDACKNSKELE 615

Query: 544 KAMNLVWFMMQ 554
           +       +MQ
Sbjct: 616 RGERCAERIMQ 626



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 119/226 (52%), Gaps = 9/226 (3%)

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           PN    I ++ A S       G ++H+Q+   +    + + NAL+S Y KCG + D ++ 
Sbjct: 5   PNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQA 64

Query: 517 FARM--SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG-QRLDHFTFATVLSAC-- 571
           F R+  + +RD V+WN+MIS ++ N    +A+ L   M   G    +  TF +VL +C  
Sbjct: 65  FDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVE 124

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF----DLMPVRNV 627
           A + +LE    +H   V A +E +  + +ALVD Y K G +D A   F    D  P  ++
Sbjct: 125 AGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSL 184

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
            + ++MIS   ++G   ++L LF  M L+G  P  VT V VL+ACS
Sbjct: 185 VTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACS 230



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 149/318 (46%), Gaps = 22/318 (6%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVSGYTHKGMSNEACK 72
           G   D  + N  +N+Y + G LA A  +F+ +    R+ ++W  +++ Y H G+  EA +
Sbjct: 354 GLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFE 413

Query: 73  MFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
           +F+ M     +  N+    +VL A      +    G ++H  V+ +    D ++ N L+ 
Sbjct: 414 LFQAMEAEKLVKPNKVTFVAVLDA--STSRTSIAQGREIHARVVSNGFESDTVIQNALLN 471

Query: 132 MYGSCLESTDCARRIFEEIET--RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           MY  C  S D A+ IF++  +   D+I+W S+++ Y+Q G      KLF  MQ++G R  
Sbjct: 472 MYAKC-GSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVR-- 528

Query: 190 LKPNEYTFGSLITAAY--SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             PN  TF S +TA      +  G  LL     M    G++      S +V    R G  
Sbjct: 529 --PNHITFISALTACNHGGKLEQGCELLS---GMTPDHGIVPASKHFSCIVDLLGRCGRL 583

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDM-VAVGNG---LVNMYA 302
             A K+ E+  Q +V++   L++  +  KE+  G      +  +   V +    L +MYA
Sbjct: 584 DEAEKLLERTSQADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYA 643

Query: 303 KCGTIDDSRSVFRFMIGK 320
             G  +++ ++ + M+ K
Sbjct: 644 AAGRWNEAATIRKTMLDK 661


>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
          Length = 694

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/646 (40%), Positives = 373/646 (57%), Gaps = 16/646 (2%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           LVN+Y+K      + +          VS+   ISG  Q+G    A+  F  M R GL  +
Sbjct: 57  LVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPN 116

Query: 357 NFSLISTLSSCASLGW-IMLGQQIHGEGLKLG-LDSDVSVSNALLSLYADAGYLSRCLKV 414
           +F+  S   + AS      +G QIH   ++ G L  D  VS A L +Y   G L     +
Sbjct: 117 DFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHL 176

Query: 415 FFLMPEHDQVSWNSVI-GAFADSEALVSEAVKYYLDMRRAGWSPNGVT---FINILAAAS 470
           F  MP  + V+WN+V+  A  D   L  E ++ Y  +R AG  PN V+   F N  A A 
Sbjct: 177 FGEMPNRNVVAWNAVMTNAVLDGRPL--ETIEAYFGLREAGGLPNVVSACAFFNACAGAM 234

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
             S   LG Q H  V+K     + ++ N+++  YGKC        +F  M  R + VSW 
Sbjct: 235 YLS---LGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVR-NSVSWC 290

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           SM++ Y  N    +A        + G+    F  ++ L+ CA +  L  G  +HA  VR+
Sbjct: 291 SMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRS 350

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
           C++ ++ + SALVDMY KCG ++ A + F   P RN+ +WN+MI GYA  G    AL +F
Sbjct: 351 CIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVF 410

Query: 651 SQMKLDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
             M   G   P+++T V V+++CS  GL  +G++ F++M + +G+ P+ E ++C+VDLLG
Sbjct: 411 DDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLG 470

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
           RAG  ++  E I  MP+ P+  +W  +LGAC      KTELGR AA  LFE++PQ++ N+
Sbjct: 471 RAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHG--KTELGRIAAEKLFELDPQDSGNH 528

Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIY 829
           VLL+NM+AS G+W +    RK MK   +KK+ GCSWVT K+ VHVF A D  H   + I 
Sbjct: 529 VLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQ 588

Query: 830 EKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIM 888
             L +L ++M+ AGY+P T+++L+DLE E KE  V  HSEK+A+AF ++     +PIRIM
Sbjct: 589 ALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIM 648

Query: 889 KNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           KNLR+C DCH AFKFIS IVGREI++RD+NRFHHF   +CSCGDYW
Sbjct: 649 KNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 694



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 207/426 (48%), Gaps = 56/426 (13%)

Query: 155 LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL 214
           ++S+ + IS  +Q G  +     F+ M R G    L+PN++TF S   AA +S    S +
Sbjct: 82  VVSYTAFISGAAQHGRPLPALSAFAGMLRLG----LRPNDFTFPSAFKAA-ASAPPRSTI 136

Query: 215 LQQILAMVKKAGLLS-DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM---- 269
             QI ++  + G L  D +V  A +  + + G    AR +F +M  +NVV+ N +M    
Sbjct: 137 GPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAV 196

Query: 270 -EGR------------------------------------RKGKEVHGYLIRSGLFDMVA 292
            +GR                                      G++ HG++++ G    V+
Sbjct: 197 LDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVS 256

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           V N +V+ Y KC     +R+VF  M  ++SVSW +M++   QNG  EEA   +   RR G
Sbjct: 257 VLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSG 316

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
              ++F + S L++CA L  + LG+ +H   ++  +D+++ V++AL+ +Y   G +    
Sbjct: 317 EEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAE 376

Query: 413 KVFFLMPEHDQVSWNSVIGAFA---DSEALVSEAVKYYLDMRRAG-WSPNGVTFINILAA 468
           ++F+  P+ + V+WN++IG +A   D++     A+  + DM R+G  +PN +T +N++ +
Sbjct: 377 QIFYETPQRNLVTWNAMIGGYAHIGDAQ----NALLVFDDMIRSGETAPNYITLVNVITS 432

Query: 469 ASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
            S   + K G+++   +  ++ +   T     ++   G+ G  +   ++   M  R    
Sbjct: 433 CSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSIS 492

Query: 528 SWNSMI 533
            W +++
Sbjct: 493 VWGALL 498



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 193/462 (41%), Gaps = 55/462 (11%)

Query: 17  AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKE 76
           A   F+C  L+N+Y ++   A+A+      P    VS+   +SG    G    A   F  
Sbjct: 48  ALSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQHGRPLPALSAFAG 107

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-TFDGLVSNVLIAMYGS 135
           M+R G   N +   S  +A     P     G Q+H L ++      D  VS   + MY  
Sbjct: 108 MLRLGLRPNDFTFPSAFKAAASAPPRS-TIGPQIHSLAIRFGYLPVDPFVSCAALDMYFK 166

Query: 136 CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
                  AR +F E+  R++++WN++++     G  +   + +  ++  G   ++     
Sbjct: 167 T-GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACA 225

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
            F +   A Y S      L +Q    V K G   D+ V +++V  + +      AR +F+
Sbjct: 226 FFNACAGAMYLS------LGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFD 279

Query: 256 QMIQKNVVS---------MNGLME--------GRRKGKE--------------------- 277
            M  +N VS          NG  E         RR G+E                     
Sbjct: 280 GMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHL 339

Query: 278 ---VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
              +H   +RS +   + V + LV+MY KCG ++D+  +F     ++ V+WN MI G   
Sbjct: 340 GRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAH 399

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNF-SLISTLSSCASLGWIMLGQQIHGEGL--KLGLDSD 391
            G  + A++ F  M R G  + N+ +L++ ++SC+  G    G ++  E +  + G++  
Sbjct: 400 IGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELF-ETMRERFGIEPR 458

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
                 ++ L   AG   +  +V   MP    +S W +++GA
Sbjct: 459 TEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGA 500



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 214/487 (43%), Gaps = 57/487 (11%)

Query: 8   HLQILKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           H   ++ G+   D F+    +++Y + G L  A  LF EMP+RN V+W  +++     G 
Sbjct: 141 HSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGR 200

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             E  + +  +  AG L N  +  +   AC   G      G Q H  V+K     D  V 
Sbjct: 201 PLETIEAYFGLREAGGLPNVVSACAFFNAC--AGAMYLSLGEQFHGFVVKCGFEMDVSVL 258

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N ++  YG C      AR +F+ +  R+ +SW S+++ Y+Q G     F  +   +R G 
Sbjct: 259 NSMVDFYGKC-RCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSG- 316

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
               +P ++   S +T    + L G +L + + A+  ++ + ++++V SALV  + + G 
Sbjct: 317 ---EEPTDFMVSSALTTC--AGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGC 371

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLF-DMVAVGN------GLVN 299
              A +IF +  Q+N+V+ N ++ G     +    L+   +F DM+  G        LVN
Sbjct: 372 VEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALL---VFDDMIRSGETAPNYITLVN 428

Query: 300 MYAKC---GTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           +   C   G   D   +F     RF I   +  +  ++  L + G  E+A      M   
Sbjct: 429 VITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMP-- 486

Query: 352 GLMSSNFSLI-STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLS 409
             M  + S+  + L +C   G   LG +I  E L   LD   S ++ LLS ++A AG  +
Sbjct: 487 --MRPSISVWGALLGACKMHGKTELG-RIAAEKL-FELDPQDSGNHVLLSNMFASAGRWA 542

Query: 410 RCLKVFFLM--------PEHDQVSWNSVIGAFA----------DSEALVSEAVKYYLDMR 451
               +   M        P    V+W +V+  F           + +AL+S+  K    M+
Sbjct: 543 EATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRK---QMQ 599

Query: 452 RAGWSPN 458
            AG+ P+
Sbjct: 600 AAGYMPD 606



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 154/339 (45%), Gaps = 25/339 (7%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           FH  ++K GF  DV + N++++ Y +      A  +FD M  RNSVSW  +V+ Y   G 
Sbjct: 242 FHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGA 301

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA   +    R+G     + + S L  C   G  G   G  +H + ++S    +  V+
Sbjct: 302 EEEAFAAYLGARRSGEEPTDFMVSSALTTC--AGLLGLHLGRALHAVAVRSCIDANIFVA 359

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L+ MYG C    D A +IF E   R+L++WN++I  Y+  GD  +   +F  M R G 
Sbjct: 360 SALVDMYGKCGCVED-AEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSG- 417

Query: 187 RYSLKPNEYTFGSLITAAYSSVLS--GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                PN  T  ++IT+     L+  G  L +    M ++ G+       + +V    R 
Sbjct: 418 --ETAPNYITLVNVITSCSRGGLTKDGYELFE---TMRERFGIEPRTEHYACVVDLLGRA 472

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LV 298
           G    A ++ + M  +  +S+ G + G  +  GK   G +    LF++    +G    L 
Sbjct: 473 GMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLS 532

Query: 299 NMYAKCGTIDDSRSVFRFM----IGKDS----VSWNTMI 329
           NM+A  G   ++  + + M    I KD     V+W  ++
Sbjct: 533 NMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVV 571


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 268/803 (33%), Positives = 422/803 (52%), Gaps = 55/803 (6%)

Query: 91  SVLRACQECGPSG----FKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRI 146
           S+ R    C P+G     +    +H     + +  D  ++N+L+  Y +     D AR +
Sbjct: 17  SLARVLLSCLPTGGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRD-ARHL 75

Query: 147 FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS 206
           F+ +  R+L+SW S+IS+Y+Q G       LF   Q+        PNE+   S++ A   
Sbjct: 76  FDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEV---PNEFLLASVLRACTQ 132

Query: 207 SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN 266
           S      L +Q+  +  K  L +++YVG+AL++ +A+LG    A  +F  +  +  V+ N
Sbjct: 133 S--KAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWN 190

Query: 267 GLMEGRRK-----------------------------------------GKEVHGYLIRS 285
            ++ G  +                                         G+++HGY  RS
Sbjct: 191 TVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRS 250

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
                 +V N L+++Y KC  +  +R +F  M  ++ VSW TMISG  QN    EAI  F
Sbjct: 251 ATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMF 310

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             M + G     F+  S L+SC SL  I  G+QIH   +K  L++D  V NAL+ +YA  
Sbjct: 311 WNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKC 370

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
            +L+    VF  + E D +S+N++I  ++ +  L +EAV  +  MR     P+ +TF+++
Sbjct: 371 EHLTEARAVFDALAEDDAISYNAMIEGYSKNRDL-AEAVNIFQRMRFFSLRPSLLTFVSL 429

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           L  +SS    +L  Q+H  +IK   + +    +AL+  Y KC  ++D + +F  M   +D
Sbjct: 430 LGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVF-NMLHYKD 488

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
            V WNSMI G+  NE   +A+ L   ++  G   + FTF  +++  +++A++  G + HA
Sbjct: 489 MVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHA 548

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
             ++A ++ D  + +AL+DMY+KCG I      F+     +V  WNSMI+ YA+HGH ++
Sbjct: 549 WIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEE 608

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
           AL +F  M      P++VTFVGVLSAC+HAG V EG  HF SM   Y + P +E ++ +V
Sbjct: 609 ALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVV 668

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN 765
           +L GR+G+L   +EFI +MPI P + +WR++L AC        E+GR AA M    +P +
Sbjct: 669 NLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFG--NAEIGRYAAEMALLADPTD 726

Query: 766 AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
           +  YVLL+N+YAS G W DV   R+ M  +   KE GCSW+ +   VH F+     HPE 
Sbjct: 727 SGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEA 786

Query: 826 DLIYEKLKELNQKMRDAGYVPQT 848
           +LIY  L EL   +++ GYVP T
Sbjct: 787 ELIYSVLDELTSLIKNLGYVPDT 809



 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 196/693 (28%), Positives = 327/693 (47%), Gaps = 68/693 (9%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+FL N L+  Y  +G L  A  LFD MP RN VSW  ++S YT  G  + A  +F    
Sbjct: 52  DLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQ 111

Query: 79  RAGF-LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
           +A   + N + L SVLRAC +        G QVH + +K +   +  V   LI +Y   L
Sbjct: 112 KASCEVPNEFLLASVLRACTQ--SKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAK-L 168

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
              D A  +F  +  R  ++WN++I+ Y+Q G      +LF RM  EG R    P+ +  
Sbjct: 169 GCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVR----PDRFVL 224

Query: 198 GSLITAAYS-SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
            S ++A  +   L G    +QI     ++   +D  V + L+  + +      ARK+F+ 
Sbjct: 225 ASAVSACSALGFLEGG---RQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDC 281

Query: 257 MIQKNVVSMNGLMEGRR-----------------------------------------KG 275
           M  +N+VS   ++ G                                           +G
Sbjct: 282 MEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQG 341

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           +++H ++I++ L     V N L++MYAKC  + ++R+VF  +   D++S+N MI G  +N
Sbjct: 342 RQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKN 401

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
               EA+  F  MR   L  S  + +S L   +S   I L +QIHG  +K G   D+  +
Sbjct: 402 RDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAA 461

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           +AL+ +Y+    ++    VF ++   D V WNS+I   A +E    EA+K +  +  +G 
Sbjct: 462 SALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQ-GEEAIKLFNQLLLSGM 520

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
           +PN  TF+ ++  AS+ +    G Q HA +IK  V N+  + NAL+  Y KCG + +   
Sbjct: 521 APNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRM 580

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F       D + WNSMI+ Y  +    +A+ +   M +     ++ TF  VLSACA   
Sbjct: 581 LFESTCG-EDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAG 639

Query: 576 TLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVRNVYS-W 630
            +  G+  H   +++   +D+  G    +++V+++ + G++  A  F + MP++   + W
Sbjct: 640 FVGEGLN-HFNSMKS--NYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVW 696

Query: 631 NSMIS-----GYARHGHGDKALTLFSQMKLDGP 658
            S++S     G A  G     + L +     GP
Sbjct: 697 RSLLSACHLFGNAEIGRYAAEMALLADPTDSGP 729



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 136/477 (28%), Positives = 230/477 (48%), Gaps = 63/477 (13%)

Query: 14  HGFAY------DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           HG+AY      D  + N LI++Y +   L++A KLFD M  RN VSW  ++SGY     +
Sbjct: 244 HGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFN 303

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA  MF  M +AG+  + +A  S+L +C     +    G Q+H  V+K++   D  V N
Sbjct: 304 AEAITMFWNMTQAGWQPDGFACTSILNSCGSL--AAIWQGRQIHAHVIKADLEADEYVKN 361

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI MY  C   T+ AR +F+ +   D IS+N++I  YS+  D      +F RM+     
Sbjct: 362 ALIDMYAKCEHLTE-ARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMR----F 416

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           +SL+P+  TF SL+  + S +     L +QI  ++ K+G   DLY  SAL+  +++    
Sbjct: 417 FSLRPSLLTFVSLLGVSSSQL--AIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLV 474

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------------- 274
             A+ +F  +  K++V  N ++ G  +                                 
Sbjct: 475 NDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVA 534

Query: 275 --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                   G++ H ++I++G+ +   V N L++MYAKCG I + R +F    G+D + WN
Sbjct: 535 STLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWN 594

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
           +MI+   Q+G  EEA+  F  M    +  +  + +  LS+CA  G++  G   H   +K 
Sbjct: 595 SMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLN-HFNSMKS 653

Query: 387 GLDSDVSVSN--ALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA---FADSE 437
             D +  + +  ++++L+  +G L    +    MP     + W S++ A   F ++E
Sbjct: 654 NYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAE 710



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 161/355 (45%), Gaps = 50/355 (14%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H  ++K     D ++ N LI++Y +   L  A  +FD + + +++S+  ++ GY+  
Sbjct: 342 RQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKN 401

Query: 65  GMSNEACKMFKEM----VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
               EA  +F+ M    +R   L     LG              +   Q+H L++KS  +
Sbjct: 402 RDLAEAVNIFQRMRFFSLRPSLLTFVSLLGV------SSSQLAIELSKQIHGLIIKSGTS 455

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D   ++ LI +Y  C    D A+ +F  +  +D++ WNS+I  ++Q        KLF++
Sbjct: 456 LDLYAASALIDVYSKCSLVND-AKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQ 514

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           +   G    + PNE+TF +L+T A  S L+  +  QQ  A + KAG+ +D +V +AL+  
Sbjct: 515 LLLSG----MAPNEFTFVALVTVA--STLASMFHGQQFHAWIIKAGVDNDPHVSNALIDM 568

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
           +A+ G     R +FE    ++V+                               N ++  
Sbjct: 569 YAKCGFIKEGRMLFESTCGEDVICW-----------------------------NSMITT 599

Query: 301 YAKCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           YA+ G  +++  VFR M    +  + V++  ++S     G   E + +F +M+ +
Sbjct: 600 YAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSN 654



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 123/265 (46%), Gaps = 14/265 (5%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           +K  H  I+K G + D++  + LI+VY +   +  A  +F+ +  ++ V W  ++ G+  
Sbjct: 442 SKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQ 501

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                EA K+F +++ +G   N +   +++        +    G Q H  ++K+    D 
Sbjct: 502 NEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTL--ASMFHGQQFHAWIIKAGVDNDP 559

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG---DTISVFKLFSR 180
            VSN LI MY  C    +  R +FE     D+I WNS+I+ Y+Q G   + + VF+L   
Sbjct: 560 HVSNALIDMYAKCGFIKE-GRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGE 618

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
            + E       PN  TF  +++A   +   G   L    +M     +   +   +++V+ 
Sbjct: 619 AEVE-------PNYVTFVGVLSACAHAGFVGEG-LNHFNSMKSNYDIEPGIEHYASVVNL 670

Query: 241 FARLGNFYYARKIFEQMIQKNVVSM 265
           F R G  + A++  E+M  K   ++
Sbjct: 671 FGRSGKLHAAKEFIERMPIKPAAAV 695


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/578 (41%), Positives = 362/578 (62%), Gaps = 8/578 (1%)

Query: 352 GLMSSNFSLISTL-SSCASLGWIMLGQQIHGEGLKLG-LDSDVSVSNALLSLYADAGYLS 409
           G +  +++L S L   C  LG +  G+ +H   +    LD+ + + N ++++YA  G L 
Sbjct: 81  GSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLD 140

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
              ++F  MP  D V+W ++I  F+ +     +A+  +  M R G+ PN  T  ++L A+
Sbjct: 141 DARRMFDEMPTKDMVTWTALIAGFSQNNR-PRDALLLFPQMLRLGFQPNHFTLSSLLKAS 199

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
            S      G Q+HA  +KY   +   + +AL+  Y +CG MD  +  F  M  +  EVSW
Sbjct: 200 GSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTK-SEVSW 258

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
           N++ISG+        A++L+W M ++  +  HFT+++VLSACAS+  LE+G  VHA  ++
Sbjct: 259 NALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIK 318

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
           + L+    IG+ L+DMY+K G ID A R FD +   +V SWN+M++G A+HG G + L  
Sbjct: 319 SGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDR 378

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           F QM   G  P+ ++F+ VL+ACSH+GL+DEG  +F+ M + Y + P +  +   VDLLG
Sbjct: 379 FEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLG 437

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
           R G LD+ E FI +MPI P + +W  +LGA CR + +  ELG  AA   FE++P ++   
Sbjct: 438 RVGLLDRAERFIREMPIEPTAAVWGALLGA-CRMH-KNMELGVYAAERAFELDPHDSGPR 495

Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIY 829
           +LL+N+YAS G+W DVAK RK MKE+ VKK+  CSWV +++ VH+FVA DE+HP    I 
Sbjct: 496 MLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIR 555

Query: 830 EKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIM 888
            K +E++ K+++ GYVP T   L  ++ + +E+ + YHSEK+A+AF +L   +  PIRI 
Sbjct: 556 GKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIK 615

Query: 889 KNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           KN+RVCGDCH+A KF+SK+V REI++RD+NRFH F DG
Sbjct: 616 KNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDG 653



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 192/420 (45%), Gaps = 36/420 (8%)

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY--SSVLSGSYLLQQILA-MVK 223
           QRG  +  + L+S++ +E  R      +   G ++ A    S  L    +LQ I+  M  
Sbjct: 79  QRGSLVPDYNLYSKLLKECTRLG----KVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYA 134

Query: 224 KAGLLSD------------LYVGSALVSGFARLGNFYYARKIFEQMI----QKNVVSMNG 267
           K G L D            +   +AL++GF++      A  +F QM+    Q N  +++ 
Sbjct: 135 KCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSS 194

Query: 268 LME------GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
           L++      G   G ++H + ++ G    V VG+ LV+MYA+CG +D ++  F  M  K 
Sbjct: 195 LLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKS 254

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            VSWN +ISG  + G  E A+     M+R     ++F+  S LS+CAS+G +  G+ +H 
Sbjct: 255 EVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHA 314

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             +K GL     + N LL +YA AG +    +VF  + + D VSWN+++   A    L  
Sbjct: 315 HMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCA-QHGLGK 373

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           E +  +  M R G  PN ++F+ +L A S   +   G      + KY V  +       +
Sbjct: 374 ETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFV 433

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNELLPKAMNLVWFMMQRGQRLD 560
              G+ G +D  E+    M        W +++    +H     K M L  +  +R   LD
Sbjct: 434 DLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMH-----KNMELGVYAAERAFELD 488



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 149/273 (54%), Gaps = 14/273 (5%)

Query: 2   KDAKLFHLQIL-KHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +  ++ H  ++  H     + L N ++N+Y + G L  A ++FDEMP ++ V+W  +++G
Sbjct: 104 EQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAG 163

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           ++      +A  +F +M+R GF  N + L S+L+A       G   G Q+H   LK    
Sbjct: 164 FSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKAS--GSEHGLDPGTQLHAFCLKYGYQ 221

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
               V + L+ MY  C    D A+  F+ + T+  +SWN++IS ++++G+      L  +
Sbjct: 222 SSVYVGSALVDMYARC-GHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWK 280

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           MQR+ F    +P  +T+ S+++A  S  ++  G +    + A + K+GL    ++G+ L+
Sbjct: 281 MQRKNF----QPTHFTYSSVLSACASIGALEQGKW----VHAHMIKSGLKLIAFIGNTLL 332

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             +A+ G+   A+++F+++++ +VVS N ++ G
Sbjct: 333 DMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTG 365



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 144/319 (45%), Gaps = 19/319 (5%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   LK+G+   V++ + L+++Y R G + +A   FD MP ++ VSW  ++SG+  KG 
Sbjct: 211 LHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGE 270

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
              A  +  +M R  F    +   SVL AC   G    + G  VH  ++KS       + 
Sbjct: 271 GEHALHLLWKMQRKNFQPTHFTYSSVLSACASIG--ALEQGKWVHAHMIKSGLKLIAFIG 328

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+ MY     S D A+R+F+ +   D++SWN++++  +Q G        F +M R G 
Sbjct: 329 NTLLDMYAKA-GSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIG- 386

Query: 187 RYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
              ++PNE +F  ++TA   S L   G Y  +    ++KK  +  D+      V    R+
Sbjct: 387 ---IEPNEISFLCVLTACSHSGLLDEGLYYFE----LMKKYKVEPDVPHYVTFVDLLGRV 439

Query: 245 GNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LV 298
           G    A +   +M I+        L+   R  K +  G       F++    +G    L 
Sbjct: 440 GLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLS 499

Query: 299 NMYAKCGTIDDSRSVFRFM 317
           N+YA  G   D   V + M
Sbjct: 500 NIYASAGRWRDVAKVRKMM 518



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K G     F+ NTL+++Y + G +  A ++FD +   + VSW  +++G 
Sbjct: 307 EQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGC 366

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G+  E    F++M+R G   N  +   VL AC   G
Sbjct: 367 AQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSG 405


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/665 (39%), Positives = 374/665 (56%), Gaps = 17/665 (2%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           + +H   + SG      V + L  +Y      +D+R VF  +   D+V WNT+++GL  +
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGS 202

Query: 336 GCYEEAIMNFCAMRRDG-LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
               EA+  F  M   G +   + +L S L + A +    +G+ +H  G K GL     V
Sbjct: 203 ----EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
              L+SLYA  G +     +F  M   D V++N++I  ++ +  +V  +V+ + ++   G
Sbjct: 259 VTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSIN-GMVGSSVELFKELVGMG 317

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             P+  T + ++   S F    L   +HA V+K  +     +  AL + Y +  +MD   
Sbjct: 318 LRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSAR 377

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           + F  M E+  E SWN+MISGY  N L   A+ L   M     R +  T ++ LSACA +
Sbjct: 378 RAFDAMPEKTME-SWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQL 436

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
             L  G  VH       LE +V + +AL+DMY KCG I  A   FD M  +NV SWN MI
Sbjct: 437 GALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMI 496

Query: 635 SGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           SGY  HG G +AL L+  M +D  L P   TF+ VL ACSH GLV EG   F+SM+  YG
Sbjct: 497 SGYGLHGQGAEALKLYKDM-MDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYG 555

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMP---ITPNSLIWRTVLGACCRANCRKTEL 750
           + P +E  +CMVDLLGRAG+L +  E I++ P   + P   IW  +LGAC     +  +L
Sbjct: 556 ITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPG--IWGALLGACMVH--KDGDL 611

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
            + A+  LFE+EP+N   YVLL+N+Y S  ++ + A  R+  K  ++ K  GC+ + + D
Sbjct: 612 AKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGD 671

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
             HVF+AGD +HP+ D IY  L++L  KM +AGY P T+ AL+D+E E KE +V  HSEK
Sbjct: 672 RPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEK 731

Query: 871 IAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +A+AF +L       IRI+KNLRVC DCH+A K ISK+  R IV+RD++RFHHF DG CS
Sbjct: 732 LAIAFGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCS 791

Query: 930 CGDYW 934
           CGDYW
Sbjct: 792 CGDYW 796



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 145/580 (25%), Positives = 237/580 (40%), Gaps = 74/580 (12%)

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSII-SVYSQRGDTISVFKLF 178
           T D   ++ L+  Y S         R++      D    NS++ S+ + R D      LF
Sbjct: 54  TLDHAPASSLLLRYASLRSPPAHLLRLYRAFPRPDRFLRNSLLRSLPTLRADL-----LF 108

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG--------SYLLQQILAMVKKAGLLSD 230
                        P+ ++F    T+  SS   G        S  L+ + A+   +G  +D
Sbjct: 109 P-----------SPDSFSFAFAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAAD 157

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG------------------- 271
            +V SAL   +  L     ARK+F+ +   + V  N L+ G                   
Sbjct: 158 NFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGSEALEAFVRMAGAGSV 217

Query: 272 -------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
                                 G+ VH +  + GL     V  GL+++YAKCG ++ +R 
Sbjct: 218 RPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARH 277

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           +F  M G D V++N +ISG   NG    ++  F  +   GL  S+ +L++ +   +  G 
Sbjct: 278 LFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGH 337

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
             L   +H   +K GLD++  VS AL +LY     +    + F  MPE    SWN++I  
Sbjct: 338 EPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISG 397

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN 492
           +A +  L   AV  +  M+     PN +T  + L+A +      LG  VH  +    +  
Sbjct: 398 YAQN-GLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLEL 456

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
              +  AL+  Y KCG + +   IF  M + ++ VSWN MISGY  +    +A+ L   M
Sbjct: 457 NVYVMTALIDMYVKCGSIAEARCIFDSM-DNKNVVSWNVMISGYGLHGQGAEALKLYKDM 515

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG----SALVDMYSK 608
           M         TF +VL AC+    ++ G  V         ++ +  G    + +VD+  +
Sbjct: 516 MDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTS---DYGITPGIEHCTCMVDLLGR 572

Query: 609 CGRIDYASRFFDLMPVRNVYS--WNSMISGYARHGHGDKA 646
            G++  A       P   V    W +++     H  GD A
Sbjct: 573 AGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLA 612



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 202/473 (42%), Gaps = 58/473 (12%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H   +  GFA D F+ + L  +Y  +     A K+FD +P  ++V W  +++G +  
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLS-- 200

Query: 65  GMSNEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
              +EA + F  M  AG +  +   L SVL A  E   +    G  VH    K       
Sbjct: 201 --GSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEV--ANTTMGRCVHAFGEKCGLAQHE 256

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V   LI++Y  C +  +CAR +F+ +E  DL+++N++IS YS  G   S  +LF  +  
Sbjct: 257 HVVTGLISLYAKCGD-MECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVG 315

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G R    P+  T  +LI     S      L   + A V KAGL ++  V +AL + + R
Sbjct: 316 MGLR----PSSSTLVALIPV--HSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCR 369

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------------------------- 274
             +   AR+ F+ M +K + S N ++ G  +                             
Sbjct: 370 FNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSA 429

Query: 275 ------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                       GK VH  +    L   V V   L++MY KCG+I ++R +F  M  K+ 
Sbjct: 430 LSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNV 489

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI-HG 381
           VSWN MISG   +G   EA+  +  M    L  ++ + +S L +C+  G +  G  +   
Sbjct: 490 VSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRS 549

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS--WNSVIGA 432
                G+   +     ++ L   AG L    ++    P+       W +++GA
Sbjct: 550 MTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGA 602



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 7/200 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A   H  ++K G   +  +   L  +Y R  D+ SA + FD MP++   SW  ++SGY  
Sbjct: 341 AGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQ 400

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G++  A  +F++M       N   + S L AC + G      G  VH ++       + 
Sbjct: 401 NGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLG--ALSLGKWVHKIIANEKLELNV 458

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V   LI MY  C  S   AR IF+ ++ ++++SWN +IS Y   G      KL+  M  
Sbjct: 459 YVMTALIDMYVKC-GSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMD 517

Query: 184 EGFRYSLKPNEYTFGSLITA 203
                 L P   TF S++ A
Sbjct: 518 A----HLHPTSSTFLSVLYA 533


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 293/858 (34%), Positives = 452/858 (52%), Gaps = 102/858 (11%)

Query: 151 ETRDLISWNSIISVYSQRGDTI-SVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
           E R    W S +   +Q   T       ++ M   G    + P+ + F +++ A  ++ +
Sbjct: 45  EPRLPSEWVSHLRSQTQSSSTFHQAISTYTNMVTAG----VPPDNFAFPAVLKA--TAGI 98

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN--- 266
               L +Q+ A V K G      V ++LV+ + + G+   AR++F+++  ++ VS N   
Sbjct: 99  QDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMI 158

Query: 267 ---------------------------------------GLMEGRRKGKEVHGYLIRSGL 287
                                                   L+ G   GK+VH +++R+G 
Sbjct: 159 NAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGD 218

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
           +      N LV MYAK G + +++++F     KD VSWNT+IS L QN  +EEA++    
Sbjct: 219 WRTFT-NNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHV 277

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL-KLGLDSDVSVSNALLSLYADAG 406
           M + G+  +  +L S L +C+ L  +  G++IH   L    L  +  V  AL+ +Y +  
Sbjct: 278 MLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCK 337

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR-RAGWSPNGVTFINI 465
              +   VF  M       WN++I  +  +E    EA++ +++M    G SPN VT  ++
Sbjct: 338 QPEKGRLVFDGMFRRTIAVWNAMIAGYVRNE-FDYEAIELFVEMVFELGLSPNSVTLSSV 396

Query: 466 LAAA---SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
           L A     SF + K G  +H+ V+K+    +  ++NAL+  Y + G ++    IF  M+ 
Sbjct: 397 LPACVRCESF-LDKEG--IHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMN- 452

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ---RLDHF----------------T 563
           R+D VSWN+MI+GY+       A+NL+   MQRGQ   R++ F                T
Sbjct: 453 RKDIVSWNTMITGYVVCGRHDDALNLL-HDMQRGQAEHRINTFDDYEDNKNFPLKPNSVT 511

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
             TVL  CA++A L +G E+HA  V+  L  DV +GSALVDMY+KCG ++ +   F+ M 
Sbjct: 512 LMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMS 571

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP-----LPDHVTFVGVLSACSHAGLV 678
           VRNV +WN +I  Y  HG G++AL LF +M  +G       P+ VT++ + ++ SH+G+V
Sbjct: 572 VRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMV 631

Query: 679 DEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL-IWRTVL 737
           DEG   F +M   +G+ P  + ++C+VDLLGR+G++++    I  MP     +  W ++L
Sbjct: 632 DEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLL 691

Query: 738 GACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEV 797
           GAC     +  E+G  AA  LF ++P N ++Y    +M              + MKE  V
Sbjct: 692 GAC--KIHQNLEIGEIAAKNLFVLDP-NVLDYGTKQSMLG------------RKMKEKGV 736

Query: 798 KKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEP 857
           +KE GCSW+   D VH F+AGD SHP+   ++E L+ L+ +M+  GYVP T   L ++  
Sbjct: 737 RKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGE 796

Query: 858 ESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRD 916
           E KE ++  HSE++A+AF L   S    IR+ KNLRVC DCH A KFISKIV REI+LRD
Sbjct: 797 EEKETMLCGHSERLAIAFGLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRD 856

Query: 917 SNRFHHFNDGKCSCGDYW 934
             RFHHF +G CSCGDYW
Sbjct: 857 VRRFHHFRNGTCSCGDYW 874



 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 169/641 (26%), Positives = 289/641 (45%), Gaps = 78/641 (12%)

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           ++A   +  MV AG   + +A  +VL+A    G      G Q+H  V K  Q     V N
Sbjct: 67  HQAISTYTNMVTAGVPPDNFAFPAVLKAT--AGIQDLNLGKQLHAHVFKFGQALPTAVPN 124

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MYG C +  D ARR+F+EI  RD +SWNS+I+   +  +      LF  M  E   
Sbjct: 125 SLVNMYGKCGD-IDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLE--- 180

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
            ++ P  +T  S +  A S++++G  L +Q+ A V + G     +  +ALV+ +A+LG  
Sbjct: 181 -NVGPTSFTLVS-VAHACSNLINGLLLGKQVHAFVLRNGDWRT-FTNNALVTMYAKLGRV 237

Query: 248 YYARKIFEQMIQKNVVSMNG---------------------LMEGRRK------------ 274
           Y A+ +F+    K++VS N                      L  G R             
Sbjct: 238 YEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPAC 297

Query: 275 --------GKEVHGY-LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                   GKE+H + L+ + L +   VG  LV+MY  C   +  R VF  M  +    W
Sbjct: 298 SHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVW 357

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRD-GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           N MI+G  +N    EAI  F  M  + GL  ++ +L S L +C      +  + IH   +
Sbjct: 358 NAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVV 417

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI------GAFADSEA 438
           K G + D  V NAL+ +Y+  G +     +F  M   D VSWN++I      G   D+  
Sbjct: 418 KWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALN 477

Query: 439 LVSEAVK-----------YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           L+ +  +            Y D +     PN VT + +L   ++ +    G ++HA  +K
Sbjct: 478 LLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVK 537

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
             ++ +  + +AL+  Y KCG ++    +F +MS  R+ ++WN +I  Y  +    +A+ 
Sbjct: 538 QMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMS-VRNVITWNVLIMAYGMHGKGEEALK 596

Query: 548 LVWFMMQRGQ-----RLDHFTFATVLSACASVATLERGMEV-HACGVRACLEFDVVIGSA 601
           L   M++ G      R +  T+  + ++ +    ++ G+ + +    +  +E      + 
Sbjct: 597 LFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYAC 656

Query: 602 LVDMYSKCGRIDYASRFFDLMP--VRNVYSWNSMISGYARH 640
           LVD+  + G+I+ A      MP  ++ V +W+S++     H
Sbjct: 657 LVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIH 697



 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 159/605 (26%), Positives = 276/605 (45%), Gaps = 75/605 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  + K G A    + N+L+N+Y + GD+ +A ++FDE+ +R+ VSW  +++    
Sbjct: 104 GKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACR 163

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                 A  +F+ M+        + L SV  AC     +G   G QVH  VL+ N  +  
Sbjct: 164 FEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNL-INGLLLGKQVHAFVLR-NGDWRT 221

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
             +N L+ MY   L     A+ +F+  + +DL+SWN+IIS  SQ             M +
Sbjct: 222 FTNNALVTMYAK-LGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQ 280

Query: 184 EGFRYSLKPNEYTFGSLITAA------------YSSVLSGSYLLQQIL---AMV------ 222
            G R    PN  T  S++ A             ++ VL  + L++      A+V      
Sbjct: 281 SGVR----PNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNC 336

Query: 223 ---KKAGLLSD------LYVGSALVSGFARLGNFYYARKIFEQMI-----QKNVVSMNGL 268
              +K  L+ D      + V +A+++G+ R    Y A ++F +M+       N V+++ +
Sbjct: 337 KQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSV 396

Query: 269 M------EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
           +      E     + +H  +++ G      V N L++MY++ G I+ +RS+F  M  KD 
Sbjct: 397 LPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDI 456

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRD------------------GLMSSNFSLISTL 364
           VSWNTMI+G    G +++A+     M+R                    L  ++ +L++ L
Sbjct: 457 VSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVL 516

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
             CA+L  +  G++IH   +K  L  DV+V +AL+ +YA  G L+    VF  M   + +
Sbjct: 517 PGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVI 576

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAG-----WSPNGVTFINILAAASSFSMGKLGH 479
           +WN +I A+        EA+K +  M   G       PN VT+I I A+ S   M   G 
Sbjct: 577 TWNVLIMAYG-MHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGL 635

Query: 480 QV-HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV-SWNSMISG-Y 536
            + +    K+ +   +     L+   G+ G++++   +   M     +V +W+S++    
Sbjct: 636 NLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACK 695

Query: 537 IHNEL 541
           IH  L
Sbjct: 696 IHQNL 700



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 126/280 (45%), Gaps = 35/280 (12%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D +  H  ++K GF  D ++ N L+++Y R+G +  A  +F  M  ++ VSW  +++GY 
Sbjct: 408 DKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYV 467

Query: 63  HKGMSNEACKMFKEMVRA----------------GFLL--NRYALGSVLRACQECGPSGF 104
             G  ++A  +  +M R                  F L  N   L +VL  C      G 
Sbjct: 468 VCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALG- 526

Query: 105 KFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISV 164
             G ++H   +K   + D  V + L+ MY  C    + +R +FE++  R++I+WN +I  
Sbjct: 527 -KGKEIHAYAVKQMLSKDVAVGSALVDMYAKC-GCLNLSRTVFEQMSVRNVITWNVLIMA 584

Query: 165 YSQRGDTISVFKLFSRMQREG-FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQIL---- 219
           Y   G      KLF RM  EG     ++PNE T+ ++  +     LS S ++ + L    
Sbjct: 585 YGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFAS-----LSHSGMVDEGLNLFY 639

Query: 220 AMVKKAGL--LSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            M  K G+   SD Y  + LV    R G    A  + + M
Sbjct: 640 TMKAKHGIEPTSDHY--ACLVDLLGRSGQIEEAYNLIKTM 677


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 257/747 (34%), Positives = 399/747 (53%), Gaps = 65/747 (8%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------R 272
           DL+  + L++ + +LG    AR++F++M ++N+VS   L++                  R
Sbjct: 95  DLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLR 154

Query: 273 RKGKEVHGYLIRSGLFDMVA------------------------VGNGLVNMYAKCGTID 308
            +G EV+ +++ + L   +A                        VG+GL++ Y+ C  + 
Sbjct: 155 WEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVS 214

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
           D+  VF  ++ KD+V W  M+S   +N C E A    CA                  SC+
Sbjct: 215 DAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFR--CA-----------------QSCS 255

Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
            L      Q IHG  +K   D++  V  ALL +YA  G +      F ++P  D +  + 
Sbjct: 256 LLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSF 315

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
           +I  +A S     +A + +L + R+   PN  +  ++L A ++      G Q+H   IK 
Sbjct: 316 MISRYAQSNQ-NEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKI 374

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNL 548
              ++  + NAL+  Y KC +MD   KIF+ + +  +EVSWN+++ G+  + L  +A+++
Sbjct: 375 GHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDA-NEVSWNTIVVGFSQSGLGEEALSV 433

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
              M          T+++VL ACAS A++    ++H    ++    D VIG++L+D Y+K
Sbjct: 434 FCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAK 493

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
           CG I  A + F  +  R++ SWN++ISGYA HG    AL LF +M       + +TFV +
Sbjct: 494 CGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVAL 553

Query: 669 LSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITP 728
           LS C   GLV+ G   F SM   +G+ P +E ++C+V LLGRAG L+   +FI  +P  P
Sbjct: 554 LSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAP 613

Query: 729 NSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKA 788
           ++++WR +L +C     +   LGR +A  + E+EPQ+   YVLL+NMYA+ G  + VA  
Sbjct: 614 SAMVWRALLSSCIIH--KNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALL 671

Query: 789 RKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQT 848
           RK+M+   V+K  G SWV +K  +H F  G   HP+  +I   L+ LN K    GY+P  
Sbjct: 672 RKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDI 731

Query: 849 KFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKI 907
              L D++ E K  ++  HSE++A+A+ L       PIRI+KNLR C DCH+AF  ISKI
Sbjct: 732 NVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKI 791

Query: 908 VGREIVLRDSNRFHHFNDGKCSCGDYW 934
           V REI++RD NRFHHF DGKCSCGDYW
Sbjct: 792 VKREIIVRDINRFHHFEDGKCSCGDYW 818



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/563 (24%), Positives = 264/563 (46%), Gaps = 37/563 (6%)

Query: 1   SKDAKLFHLQILKHGFA--YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIV 58
           ++  +  H  +++ G     D+F  N L+N+Y ++G LASA +LFD MP+RN VS+  +V
Sbjct: 75  ARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLV 134

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
             +  +G    A  +F+ +   G  +N++ L ++L+       +G   G  VH    K  
Sbjct: 135 QAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGG--VHSCAWKLG 192

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK-- 176
              +  V + LI  Y  C   +D A  +F  I  +D + W +++S YS+     + F+  
Sbjct: 193 HDHNAFVGSGLIDAYSLCSLVSD-AEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRCA 251

Query: 177 -----LFSRMQREGFR----YSLKPNEYTFGSLITAAYSSV--LSGSYLLQQILAMVKKA 225
                L     R+G       +L   E   G  +   Y+    +  + L  +++      
Sbjct: 252 QSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPY---- 307

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV----SMNGLMEGRRK------G 275
               D+ + S ++S +A+      A ++F ++++ +V+    S++ +++          G
Sbjct: 308 ---DDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFG 364

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           K++H + I+ G    + VGN L++ YAKC  +D S  +F  +   + VSWNT++ G  Q+
Sbjct: 365 KQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQS 424

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G  EEA+  FC M+   +  +  +  S L +CAS   I    QIH    K   ++D  + 
Sbjct: 425 GLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIG 484

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           N+L+  YA  GY+   LKVF  + E D +SWN++I  +A      ++A++ +  M ++  
Sbjct: 485 NSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYA-LHGQAADALELFDRMNKSNV 543

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQV-IKYNVANETTIENALLSCYGKCGEMDDCE 514
             N +TF+ +L+   S  +   G  +   + I + +         ++   G+ G ++D  
Sbjct: 544 ESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDAL 603

Query: 515 KIFARMSERRDEVSWNSMISGYI 537
           +    +      + W +++S  I
Sbjct: 604 QFIGDIPSAPSAMVWRALLSSCI 626


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/639 (38%), Positives = 367/639 (57%), Gaps = 38/639 (5%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           L+  Y+  G    +R +F   + K+ V +N MI     N  Y EA+  F  M        
Sbjct: 77  LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
           +++    L +C+ L  + +G Q+H   +K+GLD+++ + NAL+++Y   G L    KV  
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            MP  D VSWNS++  +A S                         F + L          
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSG-----------------------QFDDALEICKEMDSLN 233

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY 536
           L H          V   T++EN           +     +F RM+ +++ +SWN MI+ Y
Sbjct: 234 LNHDAGTMASLSPVVCYTSLEN-----------VQYIHNMFERMT-KKNLISWNVMIAIY 281

Query: 537 IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
           ++N +  +A++L   M + G + D  T A++L AC  ++ L  G  +H    +  L+ ++
Sbjct: 282 VNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNL 341

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
           ++ +AL+DMY+KCG ++ A   FD M +R+V SW SM+S Y R G G  A+ LF++M   
Sbjct: 342 LLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDS 401

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
           G  PD + FV VLSACSH GL+D+G  +F+ M++ YG++P++E F+CMVDL GRAGE+++
Sbjct: 402 GQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEE 461

Query: 717 IEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMY 776
              FI +MP+ PN  +W  +L A CR +  K ++G  AA++LF++ P+ +  YVLL+N+Y
Sbjct: 462 AYSFIKQMPMEPNERVWGALLSA-CRVH-SKMDIGLVAADLLFQLAPKQSGYYVLLSNIY 519

Query: 777 ASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELN 836
           A  G W+DV   R AMK+  +KK  G S V +   VH F+AGD+ HP+   IY +L  L 
Sbjct: 520 AKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLV 579

Query: 837 QKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCG 895
            KM++ GY+PQT+ AL D+E E KE  ++ HSEK+A+ F +L      PIRI KNLRVCG
Sbjct: 580 GKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCG 639

Query: 896 DCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           DCH A K ISKIV R I++RD NRFHHF++G CSCGDYW
Sbjct: 640 DCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 195/432 (45%), Gaps = 17/432 (3%)

Query: 113 LVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTI 172
           +V+  +   D  ++  L+  Y +  E T  AR IF+    ++++ +N +I  Y      +
Sbjct: 61  IVINEHLRIDPTLAIKLMRAYSAQGE-TSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYV 119

Query: 173 SVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLY 232
               +F  M    F     P+ YTF  ++ A   S L    +  Q+   + K GL ++L+
Sbjct: 120 EALSIFQVMLSCAF----NPDHYTFPCVLKAC--SGLDNLRVGLQVHDAIVKVGLDTNLF 173

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA 292
           +G+ALV+ + + G    ARK+ +QM  ++VVS N ++ G  +  +    L      D + 
Sbjct: 174 IGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLN 233

Query: 293 VGNGLVNM--------YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
           + +    M        Y     +    ++F  M  K+ +SWN MI+    N    EA+  
Sbjct: 234 LNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSL 293

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F  M   G+     ++ S L +C  L  + LG+++H    K  L  ++ + NALL +YA 
Sbjct: 294 FLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAK 353

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
            G L     VF  M   D VSW S++ A+  S     +AV  +  M  +G +P+ + F++
Sbjct: 354 CGCLEEARDVFDKMRLRDVVSWTSMMSAYGRS-GQGYDAVALFAKMLDSGQNPDSIAFVS 412

Query: 465 ILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           +L+A S   +   G H       +Y +         ++  +G+ GE+++      +M   
Sbjct: 413 VLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPME 472

Query: 524 RDEVSWNSMISG 535
            +E  W +++S 
Sbjct: 473 PNERVWGALLSA 484



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 203/444 (45%), Gaps = 31/444 (6%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           KL    ++      D  L   L+  Y   G+ + A  +FD   ++N V +  ++  Y + 
Sbjct: 56  KLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNN 115

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            +  EA  +F+ M+   F  + Y    VL+AC   G    + G+QVH  ++K     +  
Sbjct: 116 NLYVEALSIFQVMLSCAFNPDHYTFPCVLKACS--GLDNLRVGLQVHDAIVKVGLDTNLF 173

Query: 125 VSNVLIAMYGSCLESTDC---ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           + N L+AMYG C     C   AR++ +++  RD++SWNS+++ Y+Q G      ++   M
Sbjct: 174 IGNALVAMYGKC----GCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEM 229

Query: 182 QREGFRYSLKPNEYTFGSL-ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
                  +L  +  T  SL     Y+S+ +  Y+      M KK     +L   + +++ 
Sbjct: 230 DS----LNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKK-----NLISWNVMIAI 280

Query: 241 FARLGNFYYARKIFEQM----IQKNVVSMNGLMEGRRK------GKEVHGYLIRSGLFDM 290
           +        A  +F QM    ++ + V++  L+           G+ +H Y+ +  L   
Sbjct: 281 YVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPN 340

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           + + N L++MYAKCG ++++R VF  M  +D VSW +M+S   ++G   +A+  F  M  
Sbjct: 341 LLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLD 400

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQ-IHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
            G    + + +S LS+C+  G +  G+        + G+   +     ++ L+  AG + 
Sbjct: 401 SGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVE 460

Query: 410 RCLKVFFLMP-EHDQVSWNSVIGA 432
                   MP E ++  W +++ A
Sbjct: 461 EAYSFIKQMPMEPNERVWGALLSA 484



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 160/345 (46%), Gaps = 42/345 (12%)

Query: 476 KLGHQVHAQ-VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           K  +++H++ VI  ++  + T+   L+  Y   GE      IF R S  ++ V +N MI 
Sbjct: 52  KTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDR-SLEKNVVFFNVMIR 110

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
            Y++N L  +A+++   M+      DH+TF  VL AC+ +  L  G++VH   V+  L+ 
Sbjct: 111 SYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDT 170

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           ++ IG+ALV MY KCG +  A +  D MP R+V SWNSM++GYA+ G  D AL +  +M 
Sbjct: 171 NLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMD 230

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKH--FKSMS---------------------QV 691
                 D  T   +     +  L +  + H  F+ M+                     + 
Sbjct: 231 SLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEA 290

Query: 692 YGLIPQLEQFSCMVD------LLGRAGELD------KIEEFINKMPITPNSLIWRTVLGA 739
             L  Q+E+     D      LL   G+L       ++ ++I K  + PN L+   +L  
Sbjct: 291 VSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDM 350

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
             +  C +     +A ++  +M  ++ V++  + + Y   G+  D
Sbjct: 351 YAKCGCLE-----EARDVFDKMRLRDVVSWTSMMSAYGRSGQGYD 390


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 226/566 (39%), Positives = 357/566 (63%), Gaps = 6/566 (1%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           + L  C     ++ G+ +H   L+     D+ + N LL++YA  G L    KVF  MP+ 
Sbjct: 65  TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D V+W ++I  ++  +    +A+ ++  M R G+SPN  T  +++ AA++   G  GHQ+
Sbjct: 125 DFVTWTTLISGYSQHDR-PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H   +K    +   + +ALL  Y + G MDD + +F  + E R++VSWN++I+G+     
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL-ESRNDVSWNALIAGHARRSG 242

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             KA+ L   M++ G R  HF++A++  AC+S   LE+G  VHA  +++  +     G+ 
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+DMY+K G I  A + FD +  R+V SWNS+++ YA+HG G +A+  F +M+  G  P+
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            ++F+ VL+ACSH+GL+DEG+ +++ M +  G++P+   +  +VDLLGRAG+L++   FI
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFI 421

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
            +MPI P + IW+ +L A CR + + TELG  AA  +FE++P +   +V+L N+YASGG+
Sbjct: 422 EEMPIEPTAAIWKALLNA-CRMH-KNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 479

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           W D A+ RK MKE+ VKKE  CSWV +++ +H+FVA DE HP+++ I  K +E+  K+++
Sbjct: 480 WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 539

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSA 900
            GYVP T   +  ++ + +E  + YHSEKIA+AF L        I I KN+RVCGDCH+A
Sbjct: 540 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTA 599

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDG 926
            K  SK+VGREI++RD+NRFHHF D 
Sbjct: 600 IKLASKVVGREIIVRDTNRFHHFKDA 625



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 218/433 (50%), Gaps = 15/433 (3%)

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
           G++  A + F   + K       L++GR     VH ++++S     + +GN L+NMYAKC
Sbjct: 53  GSYIPADRRFYNTLLKKCTVFKLLIQGRI----VHAHILQSIFRHDIVMGNTLLNMYAKC 108

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G+++++R VF  M  +D V+W T+ISG  Q+    +A++ F  M R G   + F+L S +
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            + A+      G Q+HG  +K G DS+V V +ALL LY   G +     VF  +   + V
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           SWN++I   A       +A++ +  M R G+ P+  ++ ++  A SS    + G  VHA 
Sbjct: 229 SWNALIAGHARRSG-TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAY 287

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
           +IK          N LL  Y K G + D  KIF R++ +RD VSWNS+++ Y  +    +
Sbjct: 288 MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKE 346

Query: 545 AMNLVWF--MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
           A  + WF  M + G R +  +F +VL+AC+    L+ G   +    +  +  +      +
Sbjct: 347 A--VWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTV 404

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYARHGH---GDKALTLFSQMKLDGP 658
           VD+  + G ++ A RF + MP+    + W ++++    H +   G  A     ++  D P
Sbjct: 405 VDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDP 464

Query: 659 LPDHVTFVGVLSA 671
            P HV    + ++
Sbjct: 465 GP-HVILYNIYAS 476



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 187/393 (47%), Gaps = 57/393 (14%)

Query: 85  NRYALGSVLRACQECGPSGFKFGMQ---VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD 141
           +R    ++L+ C     + FK  +Q   VH  +L+S    D ++ N L+ MY  C  S +
Sbjct: 59  DRRFYNTLLKKC-----TVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC-GSLE 112

Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
            AR++FE++  RD ++W ++IS YSQ          F++M R G+     PNE+T  S+I
Sbjct: 113 EARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGY----SPNEFTLSSVI 168

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
            AA +          Q+     K G  S+++VGSAL+  + R G    A+ +F+ +  +N
Sbjct: 169 KAAAAE--RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRN 226

Query: 262 VVSMNGLMEG--RRKGKE---------------------------------------VHG 280
            VS N L+ G  RR G E                                       VH 
Sbjct: 227 DVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHA 286

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
           Y+I+SG   +   GN L++MYAK G+I D+R +F  +  +D VSWN++++   Q+G  +E
Sbjct: 287 YMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKE 346

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A+  F  MRR G+  +  S +S L++C+  G +  G   +    K G+  +      ++ 
Sbjct: 347 AVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVD 406

Query: 401 LYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           L   AG L+R L+    MP E     W +++ A
Sbjct: 407 LLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 155/313 (49%), Gaps = 17/313 (5%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           +K GF  +V + + L+++Y R G +  A  +FD +  RN VSW  +++G+  +  + +A 
Sbjct: 188 VKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKAL 247

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
           ++F+ M+R GF  + ++  S+  AC   G    + G  VH  ++KS +       N L+ 
Sbjct: 248 ELFQGMLRDGFRPSHFSYASLFGACSSTG--FLEQGKWVHAYMIKSGEKLVAFAGNTLLD 305

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY       D AR+IF+ +  RD++SWNS+++ Y+Q G        F  M+R G R    
Sbjct: 306 MYAKSGSIHD-ARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR---- 360

Query: 192 PNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
           PNE +F S++TA ++S +L   +   +++   KK G++ + +    +V    R G+   A
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELM---KKDGIVPEAWHYVTVVDLLGRAGDLNRA 417

Query: 251 RKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAKC 304
            +  E+M I+        L+   R  K    G      +F++     G    L N+YA  
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477

Query: 305 GTIDDSRSVFRFM 317
           G  +D+  V + M
Sbjct: 478 GRWNDAARVRKKM 490



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 65/114 (57%)

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           D   + T+L  C     L +G  VHA  +++    D+V+G+ L++MY+KCG ++ A + F
Sbjct: 59  DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
           + MP R+  +W ++ISGY++H     AL  F+QM   G  P+  T   V+ A +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K G     F  NTL+++Y + G +  A K+FD +  R+ VSW  +++ Y
Sbjct: 279 EQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAY 338

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   EA   F+EM R G   N  +  SVL AC   G
Sbjct: 339 AQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/639 (38%), Positives = 366/639 (57%), Gaps = 38/639 (5%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           L+  Y+  G    +R +F   + K+ V +N MI     N  Y EA+  F  M        
Sbjct: 77  LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
           +++    L +C+ L  + +G Q+H   +K+GLD+++ + NAL+++Y   G L    KV  
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            MP  D VSWNS++  +A S                         F + L          
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSG-----------------------QFDDALEICKEMDSLN 233

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY 536
           L H          V   T++EN           +     +F RM+ +++ +SWN MI+ Y
Sbjct: 234 LNHDAGTMASLSPVVCYTSLEN-----------VQYIHNMFERMT-KKNLISWNVMIAIY 281

Query: 537 IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
           ++N +  +A++L   M + G + D  T A++L AC  ++ L  G  +H    +  L  ++
Sbjct: 282 VNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNL 341

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
           ++ +AL+DMY+KCG ++ A   FD M +R+V SW SM+S Y R G G  A+ LF++M   
Sbjct: 342 LLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDS 401

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
           G  PD + FV VLSACSH GL+D+G  +F+ M++ YG++P++E F+CMVDL GRAGE+++
Sbjct: 402 GQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEE 461

Query: 717 IEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMY 776
              FI +MP+ PN  +W  +L A CR +  K ++G  AA++LF++ P+ +  YVLL+N+Y
Sbjct: 462 AYSFIKQMPMEPNERVWGALLSA-CRVH-SKMDIGLVAADLLFQLAPKQSGYYVLLSNIY 519

Query: 777 ASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELN 836
           A  G W+DV   R AMK+  +KK  G S V +   VH F+AGD+ HP+   IY +L  L 
Sbjct: 520 AKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLV 579

Query: 837 QKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCG 895
            KM++ GY+PQT+ AL D+E E KE  ++ HSEK+A+ F +L      PIRI KNLRVCG
Sbjct: 580 GKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCG 639

Query: 896 DCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           DCH A K ISKIV R I++RD NRFHHF++G CSCGDYW
Sbjct: 640 DCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/444 (24%), Positives = 200/444 (45%), Gaps = 18/444 (4%)

Query: 102 SGFKFGMQVHC-LVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNS 160
            G K   ++H  +V+  +   D  ++  L+  Y +  E T  AR IF+    ++++ +N 
Sbjct: 49  PGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGE-TSVARYIFDRSLEKNVVFFNV 107

Query: 161 IISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILA 220
           +I  Y      +    +F  M    F     P+ YTF  ++ A   S L    +  Q+  
Sbjct: 108 MIRSYVNNNLYVEALSIFQVMLSCAF----NPDHYTFPCVLKAC--SGLDNLRVGLQVHD 161

Query: 221 MVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHG 280
            + K GL ++L++G+ALV+ + + G    ARK+ +QM  ++VVS N ++ G  +  +   
Sbjct: 162 AIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDD 221

Query: 281 YLIRSGLFDMVAVGNGLVNM--------YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
            L      D + + +    M        Y     +    ++F  M  K+ +SWN MI+  
Sbjct: 222 ALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIY 281

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
             N    EA+  F  M   G+     ++ S L +C  L  + LG+++H    K  L  ++
Sbjct: 282 VNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNL 341

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            + NALL +YA  G L     VF  M   D VSW S++ A+  S     +AV  +  M  
Sbjct: 342 LLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRS-GQGYDAVALFAKMLD 400

Query: 453 AGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
           +G +P+ + F+++L+A S   +   G H       +Y +         ++  +G+ GE++
Sbjct: 401 SGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVE 460

Query: 512 DCEKIFARMSERRDEVSWNSMISG 535
           +      +M    +E  W +++S 
Sbjct: 461 EAYSFIKQMPMEPNERVWGALLSA 484



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 203/444 (45%), Gaps = 31/444 (6%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           KL    ++      D  L   L+  Y   G+ + A  +FD   ++N V +  ++  Y + 
Sbjct: 56  KLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNN 115

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            +  EA  +F+ M+   F  + Y    VL+AC   G    + G+QVH  ++K     +  
Sbjct: 116 NLYVEALSIFQVMLSCAFNPDHYTFPCVLKACS--GLDNLRVGLQVHDAIVKVGLDTNLF 173

Query: 125 VSNVLIAMYGSCLESTDC---ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           + N L+AMYG C     C   AR++ +++  RD++SWNS+++ Y+Q G      ++   M
Sbjct: 174 IGNALVAMYGKC----GCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEM 229

Query: 182 QREGFRYSLKPNEYTFGSL-ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
                  +L  +  T  SL     Y+S+ +  Y+      M KK     +L   + +++ 
Sbjct: 230 DS----LNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKK-----NLISWNVMIAI 280

Query: 241 FARLGNFYYARKIFEQM----IQKNVVSMNGLMEGRRK------GKEVHGYLIRSGLFDM 290
           +        A  +F QM    ++ + V++  L+           G+ +H Y+ +  L   
Sbjct: 281 YVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPN 340

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           + + N L++MYAKCG ++++R VF  M  +D VSW +M+S   ++G   +A+  F  M  
Sbjct: 341 LLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLD 400

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQ-IHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
            G    + + +S LS+C+  G +  G+        + G+   +     ++ L+  AG + 
Sbjct: 401 SGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVE 460

Query: 410 RCLKVFFLMP-EHDQVSWNSVIGA 432
                   MP E ++  W +++ A
Sbjct: 461 EAYSFIKQMPMEPNERVWGALLSA 484



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 160/345 (46%), Gaps = 42/345 (12%)

Query: 476 KLGHQVHAQ-VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           K  +++H++ VI  ++  + T+   L+  Y   GE      IF R S  ++ V +N MI 
Sbjct: 52  KTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDR-SLEKNVVFFNVMIR 110

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
            Y++N L  +A+++   M+      DH+TF  VL AC+ +  L  G++VH   V+  L+ 
Sbjct: 111 SYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDT 170

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           ++ IG+ALV MY KCG +  A +  D MP R+V SWNSM++GYA+ G  D AL +  +M 
Sbjct: 171 NLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMD 230

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKH--FKSMS---------------------QV 691
                 D  T   +     +  L +  + H  F+ M+                     + 
Sbjct: 231 SLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEA 290

Query: 692 YGLIPQLEQFSCMVD------LLGRAGELD------KIEEFINKMPITPNSLIWRTVLGA 739
             L  Q+E+     D      LL   G+L       ++ ++I K  + PN L+   +L  
Sbjct: 291 VSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDM 350

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
             +  C +     +A ++  +M  ++ V++  + + Y   G+  D
Sbjct: 351 YAKCGCLE-----EARDVFDKMRLRDVVSWTSMMSAYGRSGQGYD 390


>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
 gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 687

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 251/662 (37%), Positives = 378/662 (57%), Gaps = 11/662 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK VH  ++R+  FD+V   N L+ +Y KCG +  +R VF  M  ++ VS N ++SG   
Sbjct: 35  GKAVHARVVRAARFDVVQYNN-LIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYAS 93

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +G + +A+     +R      + + L S +++ A +    +G+Q HG  +K GL     V
Sbjct: 94  SGRHRDAL---ALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYV 150

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            +A+L +Y    ++   +KVF  +   +  ++NS+I  F D   +          +R  G
Sbjct: 151 CSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVG 210

Query: 455 -WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
            W  + V+++ +L   +S     LG QVH Q +K  +     + +AL+  YGKC    + 
Sbjct: 211 QW--DHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEA 268

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            ++F  + E+ + VSW ++++ Y  NEL   A+ L   M   G R + FT+A  L++CA 
Sbjct: 269 NRVFEVLPEK-NIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAG 327

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           +ATL+ G  + AC ++      + + +AL++MYSK G ++ A R F  MP R+V SWNS+
Sbjct: 328 LATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSI 387

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I GYA HG   +A+  F  M     +P +VTF+GVLSAC+  GLVDEGF +   M +  G
Sbjct: 388 IIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVG 447

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           + P  E ++CMV LL R G LD+ E FI    I  + + WR++L +C     R   LG +
Sbjct: 448 VKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSC--QVYRNYGLGHR 505

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
            A  +F+++P++   YVLL+NMYA   +W+ V K R+ M+E  V+KE G SW+ +   VH
Sbjct: 506 VAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVH 565

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
           VF + D+ HP  + I +KL+EL  K++  GYVP    AL D+E E KE+ + YHSEK+A+
Sbjct: 566 VFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLAL 625

Query: 874 AFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           AF L R  K   IRIMKN+R+C DCH A K IS   GR IV+RD+ RFH   DG CSC D
Sbjct: 626 AFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSCDD 685

Query: 933 YW 934
           YW
Sbjct: 686 YW 687



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 185/410 (45%), Gaps = 54/410 (13%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H ++++    +DV   N LI +YV+ G L  A ++FD MP RN VS   ++SGY   
Sbjct: 36  KAVHARVVR-AARFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASS 94

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   +A  + +    A F LN Y L S + A        +  G Q H   +K+       
Sbjct: 95  GRHRDALALLRV---ADFGLNEYVLSSAVAATAHV--RSYDMGRQCHGYAIKAGLAEHPY 149

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V + ++ MY  C    D A ++F+ + + ++ ++NS+I+ +  RG       +   M R 
Sbjct: 150 VCSAVLHMYCQCAH-MDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRN 208

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
             ++         G    A+   V+ GS +  Q L    K  L  ++YVGSALV  + + 
Sbjct: 209 VGQWDHVSYVAVLGH--CASTKEVVLGSQVHTQAL----KRRLELNVYVGSALVDMYGKC 262

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLM---------------------EGRR---------- 273
              + A ++FE + +KN+VS   +M                     EG R          
Sbjct: 263 DFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVAL 322

Query: 274 ----------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      G  +    +++G + ++ V N L+NMY+K G+++D+R VF  M  +D V
Sbjct: 323 NSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVV 382

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           SWN++I G   +G   EA+  F  M     + S  + I  LS+CA LG +
Sbjct: 383 SWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLV 432



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 140/293 (47%), Gaps = 19/293 (6%)

Query: 472 FSMGKLGHQVHAQVIKYNVANETTIE-NALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
            S+GK    VHA+V++   A    ++ N L++ Y KCG +    ++F  M   R+ VS N
Sbjct: 32  LSLGK---AVHARVVR--AARFDVVQYNNLIALYVKCGRLGLARQVFDAMPS-RNPVSGN 85

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
            ++SGY  +     A+ L   +      L+ +  ++ ++A A V + + G + H   ++A
Sbjct: 86  LLMSGYASSGRHRDALAL---LRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKA 142

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
            L     + SA++ MY +C  +D A + FD +   NV+++NSMI+G+   G  D + ++ 
Sbjct: 143 GLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIV 202

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLG 709
             M  +    DHV++V VL  C+    V  G + H +++ +   L   +   S +VD+ G
Sbjct: 203 RSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLEL--NVYVGSALVDMYG 260

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
           +     +       +P   N + W  ++ A       + EL   A  +  +ME
Sbjct: 261 KCDFPHEANRVFEVLP-EKNIVSWTAIMTAYT-----QNELFEDALQLFLDME 307


>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
 gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
          Length = 845

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 256/763 (33%), Positives = 405/763 (53%), Gaps = 44/763 (5%)

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME-- 270
           Y  + +   ++  G++   Y+ S+L+ GF+  G  Y A  +F Q++    V  N      
Sbjct: 86  YAQKALELFIEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFV 145

Query: 271 --------GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                      +G +VHG +++ G    + V N L++ Y +CG ID  R VF  M  ++ 
Sbjct: 146 LSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNV 205

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           VSW ++I G  + GCY+EA+  F  M   G+  ++ +++  +S+CA L  + LG+Q+   
Sbjct: 206 VSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTC 265

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
             +L L+ +  + NAL+ +Y   G + +  K+F    + + V +N+++  +   + L  E
Sbjct: 266 IGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYV-RQGLARE 324

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
            +    +M + G  P+ +T ++ ++A S       G   H  V++  +     + NA+++
Sbjct: 325 VLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIIN 384

Query: 503 CYGKCGEMDDCEKIFARMSERR------------------------------DEVSWNSM 532
            Y KCG+ +   ++F RM  +                               D VSWN+M
Sbjct: 385 MYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTM 444

Query: 533 ISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL 592
           I   +   +  +A+ L   M   G   D  T   V SAC  +  L+    +H    +  +
Sbjct: 445 IGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDI 504

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
            FD+ +G+ALVDM+++CG    A + F+ M  R+V +W + I   A  G+G  A+ LF +
Sbjct: 505 HFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDE 564

Query: 653 MKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG 712
           M   G  PD V FV +L+A SH GLV++G+  F+SM  +YG+ PQ   + CMVDLLGRAG
Sbjct: 565 MLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAG 624

Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLL 772
            L +    IN M + PN +IW ++L A CR + +  ++   AA  + E++P+    +VLL
Sbjct: 625 LLSEALSLINSMQMEPNDVIWGSLLAA-CRVH-KNVDIAAYAAERISELDPERTGIHVLL 682

Query: 773 ANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKL 832
           +N+YAS G+W+DVAK R  +KE    K  G S + +   +  F  GDESHPE   I   L
Sbjct: 683 SNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPML 742

Query: 833 KELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNL 891
           KE+  ++RD GYVP     L D+  + KE L+S HSEK+A+AF L    + +PIR+ KNL
Sbjct: 743 KEICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNL 802

Query: 892 RVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           R+C DCHS  K +SK   REI++RD+NRFH F  G CSCGDYW
Sbjct: 803 RICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQQGFCSCGDYW 845



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 263/557 (47%), Gaps = 50/557 (8%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  I+K GF  D+F+ N+LI+ Y   G++    ++FD+M +RN VSW  ++ GY  +G  
Sbjct: 162 HGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCY 221

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA  +F EMV  G   N   +  V+ AC +      + G QV   + +     + L+ N
Sbjct: 222 KEAVSLFFEMVEVGIRPNSVTMVGVISACAKL--QDLQLGEQVCTCIGELELEVNALMVN 279

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY  C  + D AR+IF+E   ++L+ +N+I+S Y ++G    V  +   M + G R
Sbjct: 280 ALVDMYMKC-GAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPR 338

Query: 188 YSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
               P+  T  S ++A      V  G +    +L    + GL     V +A+++ + + G
Sbjct: 339 ----PDRITMLSAVSACSELDDVSCGKWCHGYVL----RNGLEGWDNVCNAIINMYMKCG 390

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
               A ++F++M+ K  VS N L+ G                             + + G
Sbjct: 391 KQEMACRVFDRMLNKTRVSWNSLIAG-----------------------------FVRNG 421

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            ++ +  +F  M   D VSWNTMI  L Q   ++EAI  F  M+ +G+ +   +++   S
Sbjct: 422 DMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVAS 481

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           +C  LG + L + IHG   K  +  D+ +  AL+ ++A  G     ++VF  M + D  +
Sbjct: 482 ACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSA 541

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQ 484
           W + IGA A  E   + A++ + +M + G  P+GV F+ +L A S   + + G H   + 
Sbjct: 542 WTAAIGAMA-MEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSM 600

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNELLP 543
              Y +A +      ++   G+ G + +   +   M    ++V W S+++   +H     
Sbjct: 601 KDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVH----- 655

Query: 544 KAMNLVWFMMQRGQRLD 560
           K +++  +  +R   LD
Sbjct: 656 KNVDIAAYAAERISELD 672



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 164/307 (53%), Gaps = 14/307 (4%)

Query: 377 QQIHGEGLKLGLDS-DVSVSNAL-----LSLYADAGYLSRCLKVFF----LMPEHDQVSW 426
           +Q+H +  K GL+   +S++N +     +  +    Y  + L++F     +M  H   S 
Sbjct: 50  KQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFS- 108

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
            S+I  F+    L  +A+  +  +   G  P+  TF  +L+A +  +    G QVH  ++
Sbjct: 109 -SLIRGFSAC-GLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166

Query: 487 KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAM 546
           K     +  +EN+L+  YG+CGE+D   ++F +MSER + VSW S+I GY       +A+
Sbjct: 167 KMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSER-NVVSWTSLIGGYAKRGCYKEAV 225

Query: 547 NLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMY 606
           +L + M++ G R +  T   V+SACA +  L+ G +V  C     LE + ++ +ALVDMY
Sbjct: 226 SLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMY 285

Query: 607 SKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFV 666
            KCG ID A + FD    +N+  +N+++S Y R G   + L +  +M   GP PD +T +
Sbjct: 286 MKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITML 345

Query: 667 GVLSACS 673
             +SACS
Sbjct: 346 SAVSACS 352



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 38/231 (16%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVY-------------------------------VR 32
            K  H  +L++G      +CN +IN+Y                               VR
Sbjct: 360 GKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVR 419

Query: 33  VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSV 92
            GD+ SA K+F  MPD + VSW  ++     + M  EA ++F+ M   G   ++  +  V
Sbjct: 420 NGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGV 479

Query: 93  LRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIET 152
             AC   G         +H  + K +  FD  +   L+ M+  C +    A ++F ++  
Sbjct: 480 ASACGYLG--ALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQS-AMQVFNKMVK 536

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           RD+ +W + I   +  G+     +LF  M ++G    +KP+   F +L+TA
Sbjct: 537 RDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQG----IKPDGVVFVALLTA 583



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 58/282 (20%), Positives = 113/282 (40%), Gaps = 47/282 (16%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  I K    +D+ L   L++++ R GD  SA ++F++M  R+  +W   +     
Sbjct: 492 AKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAM 551

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           +G    A ++F EM++ G   +     ++L A    G            LV +    F  
Sbjct: 552 EGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGG------------LVEQGWHIFRS 599

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +       +YG   ++                + +  ++ +  + G       L + MQ 
Sbjct: 600 MKD-----IYGIAPQA----------------VHYGCMVDLLGRAGLLSEALSLINSMQM 638

Query: 184 EGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAM-VKKAG---LLSDLYVGSAL 237
           E       PN+  +GSL+ A   + +V   +Y  ++I  +  ++ G   LLS++Y  +  
Sbjct: 639 E-------PNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGR 691

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVH 279
               A++   +   K   +M   + + +NG +     G E H
Sbjct: 692 WDDVAKV-RLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESH 732


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/662 (36%), Positives = 380/662 (57%), Gaps = 7/662 (1%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKC--GTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           ++VH +L+++       +   ++   A     TID + S+F  +   +S ++N MI GL 
Sbjct: 38  QQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLA 97

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
                + A++ F  M    +    F+  S L +C+ +  +  G+Q+H   LK G  S+  
Sbjct: 98  FKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEF 157

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V N L+ +YA+ G +     VF  MPE   V+WNS++  +  +  L  E VK +  +   
Sbjct: 158 VENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKN-GLWDEVVKLFRKILEL 216

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
               + VT I++L A    +  ++G  +   ++   +    T+  +L+  Y KCG++D  
Sbjct: 217 RIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTA 276

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            K+F  M ++RD V+W++MISGY   +   +A+NL   M +     +  T  +VL +CA 
Sbjct: 277 RKLFDEM-DKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAM 335

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           +   E G  VH    +  ++  V +G+ L+D Y+KCG ID +   F  M  +NV++W ++
Sbjct: 336 LGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTAL 395

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I G A +G G  AL  FS M  +   P+ VTF+GVLSACSHA LVD+G   F SM + + 
Sbjct: 396 IQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFD 455

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           + P++E + CMVD+LGRAG L++  +FI+ MP  PN+++WRT+L A CRA+ +  E+  K
Sbjct: 456 IEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLL-ASCRAH-KNIEMAEK 513

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
           +   +  +EP ++ +Y+LL+N YA  G+ ED  + R  +KE E+KK  GCS + +   VH
Sbjct: 514 SLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVH 573

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
            F + D  H     I++ L ++ ++++  GYVP T  A  + E ESKE  VS+HSEK+A+
Sbjct: 574 EFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAI 633

Query: 874 AFVLTRNS-KLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           A+ L R S +  IRI KNLR+C DCH+A KFIS++  R I++RD NRFHHF DG CSC D
Sbjct: 634 AYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCND 693

Query: 933 YW 934
           YW
Sbjct: 694 YW 695



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 205/407 (50%), Gaps = 16/407 (3%)

Query: 251 RKIFEQMIQKNVVSMNGL------MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
           +K+ E+ +Q +  + + +      M+  R+G++VH  +++SG      V N L+ MYA C
Sbjct: 110 KKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANC 169

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G I  +R VF  M  +  V+WN+M+SG  +NG ++E +  F  +    +   + ++IS L
Sbjct: 170 GQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVL 229

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +C  L  + +G+ I    +  GL  + +++ +L+ +YA  G +    K+F  M + D V
Sbjct: 230 MACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVV 289

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           +W+++I  +A ++    EA+  + +M++    PN VT +++L + +     + G  VH  
Sbjct: 290 AWSAMISGYAQADR-CKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFY 348

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
           + K  +    T+   L+  Y KCG +D   ++F  MS  ++  +W ++I G  +N     
Sbjct: 349 IKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMS-FKNVFTWTALIQGLANNGEGKM 407

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG----S 600
           A+     M++   + +  TF  VLSAC+    +++G  +     R   +FD+        
Sbjct: 408 ALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRR---DFDIEPRIEHYG 464

Query: 601 ALVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSMISGYARHGHGDKA 646
            +VD+  + G ++ A +F D MP   N   W ++++    H + + A
Sbjct: 465 CMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMA 511



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 213/477 (44%), Gaps = 56/477 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLIN--VYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           KD +  H  +LK     D  +   ++     +    +  A  +F+ +    S ++  ++ 
Sbjct: 35  KDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIR 94

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           G   K   + A  +FK+M       +++   SVL+AC        + G QVH L+LKS  
Sbjct: 95  GLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRM--KALREGEQVHALILKSGF 152

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             +  V N LI MY +C +    AR +F+ +  R +++WNS++S Y++ G    V KLF 
Sbjct: 153 KSNEFVENTLIQMYANCGQ-IGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLF- 210

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
              R+     ++ ++ T  S++ A     L+   + + I   +   GL  +  + ++L+ 
Sbjct: 211 ---RKILELRIEFDDVTMISVLMAC--GRLANLEIGELIGEYIVSKGLRRNNTLTTSLID 265

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------- 274
            +A+ G    ARK+F++M +++VV+ + ++ G  +                         
Sbjct: 266 MYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVT 325

Query: 275 ----------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                           GK VH Y+ +  +   V +G  L++ YAKCG ID S  VF+ M 
Sbjct: 326 MVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMS 385

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            K+  +W  +I GL  NG  + A+  F +M  + +  ++ + I  LS+C+    +  G+ 
Sbjct: 386 FKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRH 445

Query: 379 IHGEGLKLGLDSDVSVSN--ALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           +    ++   D +  + +   ++ +   AG+L    +    MP   + V W +++ +
Sbjct: 446 LFN-SMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLAS 501


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/713 (35%), Positives = 401/713 (56%), Gaps = 20/713 (2%)

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMN----------GLMEGRRKGKEVHGYLIRSG 286
           ++  +A  G F  +  ++  M+Q  V   N            ++  + G+ +H +    G
Sbjct: 78  MIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILG 137

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS--VSWNTMISGLDQNGCYEEAIMN 344
           L   + V   L++MYAKCG +  ++++F  +  +D   V+WN MI+    +  + + I +
Sbjct: 138 LSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHS 197

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
              M++ G+  ++ +L+S L +      +  G+ IH   ++     +V +  ALL +YA 
Sbjct: 198 VAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAK 257

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR-RAGWSPNGVTFI 463
              L    K+F  + + + V W+++IG +   ++ +S+A+  Y DM    G +P   T  
Sbjct: 258 CHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDS-ISDALALYDDMLCIYGLNPTPATLA 316

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
            +L A +  +  K G ++H  +IK  +  +TT+ N+L+S Y KCG MD+       M  +
Sbjct: 317 TMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAK 376

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF-TFATVLSACASVATLERGME 582
            D VS++++ISG + N    KA+ L++  MQ      +  T   +L AC+ +A L+ G  
Sbjct: 377 -DTVSYSAIISGCVQNGYAEKAL-LIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTC 434

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
            H   V      D  I +A++DMYSKCG+I  +   FD M  R++ SWN+MI GY  HG 
Sbjct: 435 CHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGL 494

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
             +AL+LF +++  G  PD VT + VLSACSH+GLV EG   F SMSQ + + P++  + 
Sbjct: 495 CVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYI 554

Query: 703 CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
           CMVDLL RAG LD+   FI +MP  PN  IW  +L A CR + +  E+G + +  +  + 
Sbjct: 555 CMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAA-CRTH-KNIEMGEQVSKKIQLLG 612

Query: 763 PQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESH 822
           P+   N+VL++N+Y+S G+W+D A  R   +    KK  GCSWV +   +HVF+ G +SH
Sbjct: 613 PEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSH 672

Query: 823 PEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNS 881
           P+   I +KL+EL  +M+  GY   + F L D+E E KE ++ YHSEK+A+AF +L  + 
Sbjct: 673 PQSASINKKLQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSP 732

Query: 882 KLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
              I + KNLR+C DCHSA KFI+ +  REI +RD++RFHHF DG C+C D+W
Sbjct: 733 SSRILVTKNLRICVDCHSAIKFITLLTEREITVRDASRFHHFKDGICNCQDFW 785



 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 250/486 (51%), Gaps = 11/486 (2%)

Query: 258 IQKNVVSMNGLMEGRRKGKEVHGYLIRSG---LFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
           +++ VVS+  L+  R++ +++  +        + D  A    L   +     I  +R VF
Sbjct: 6   LKREVVSI-LLINWRQRHRQIRSFSPHPHPHRVSDSDAAATQLARYHISRNEIQLARHVF 64

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             +     V WN MI     +G ++++I  +  M + G+  +NF+    L +C+SL  + 
Sbjct: 65  DQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQ 124

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ--VSWNSVIGA 432
           LG+ IH     LGL  D+ VS ALL +YA  G+L +   +F  +   D+  V+WN++I A
Sbjct: 125 LGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAA 184

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN 492
           F+   AL ++ +     M++AG +PN  T ++IL      +    G  +HA  I+    +
Sbjct: 185 FS-FHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFD 243

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
              ++ ALL  Y KC  +    KIF  ++++ D V W++MI GY+ ++ +  A+ L   M
Sbjct: 244 NVVLQTALLDMYAKCHLLFYARKIFNTVNKKND-VCWSAMIGGYVLHDSISDALALYDDM 302

Query: 553 M-QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR 611
           +   G      T AT+L ACA +  L+RG ++H   +++ ++ D  +G++L+ MY+KCG 
Sbjct: 303 LCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGI 362

Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
           +D A  F D M  ++  S++++ISG  ++G+ +KAL +F QM+  G  P   T + +L A
Sbjct: 363 MDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPA 422

Query: 672 CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
           CSH   +  G       + V G        + ++D+  + G++    E  ++M    + +
Sbjct: 423 CSHLAALQHG-TCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQ-NRDII 480

Query: 732 IWRTVL 737
            W T++
Sbjct: 481 SWNTMI 486



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/558 (23%), Positives = 252/558 (45%), Gaps = 61/558 (10%)

Query: 26  LINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLN 85
           L   ++   ++  A  +FD++P  + V W  ++  Y   G   ++  ++  M++ G    
Sbjct: 47  LARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPT 106

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
            +    +L+AC        + G  +H        + D  VS  L+ MY  C      A+ 
Sbjct: 107 NFTFPFLLKACSSL--QALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQ-AQT 163

Query: 146 IFEEI--ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI-T 202
           +F  I  + RD+++WN++I+ +S            ++MQ+ G    + PN  T  S++ T
Sbjct: 164 LFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAG----VTPNSSTLVSILPT 219

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
              ++ L      + I A   +     ++ + +AL+  +A+    +YARKIF  + +KN 
Sbjct: 220 IGQANALHQG---KAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKND 276

Query: 263 VSMNGLMEGR------------------------------------------RKGKEVHG 280
           V  + ++ G                                           ++GK++H 
Sbjct: 277 VCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHC 336

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
           ++I+SG+     VGN L++MYAKCG +D++      MI KD+VS++ +ISG  QNG  E+
Sbjct: 337 HMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEK 396

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A++ F  M+  G+     ++I+ L +C+ L  +  G   HG  +  G  +D S+ NA++ 
Sbjct: 397 ALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIID 456

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +Y+  G ++   ++F  M   D +SWN++I  +     L  EA+  + +++  G  P+ V
Sbjct: 457 MYSKCGKITISREIFDRMQNRDIISWNTMIIGYG-IHGLCVEALSLFQELQALGLKPDDV 515

Query: 461 TFINILAAASSFSM---GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           T I +L+A S   +   GK      +Q   +N+         ++    + G +D+     
Sbjct: 516 TLIAVLSACSHSGLVTEGKYWFSSMSQ--NFNIKPRMAHYICMVDLLARAGNLDEAYTFI 573

Query: 518 ARMSERRDEVSWNSMISG 535
            RM    +   W ++++ 
Sbjct: 574 QRMPFVPNVRIWGALLAA 591



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 184/417 (44%), Gaps = 53/417 (12%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVSGYT 62
           +L H      G + D+++   L+++Y + G L  A  LF+ +   DR+ V+W  +++ ++
Sbjct: 127 RLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFS 186

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
              +  +      +M +AG   N   L S+L    +   +    G  +H   ++ N  FD
Sbjct: 187 FHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQA--NALHQGKAIHAYYIR-NFFFD 243

Query: 123 GLV-SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
            +V    L+ MY  C      AR+IF  +  ++ + W+++I  Y           L+  M
Sbjct: 244 NVVLQTALLDMYAKC-HLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDM 302

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
                 Y L P   T  +++ A   + L+     +++   + K+G+  D  VG++L+S +
Sbjct: 303 L---CIYGLNPTPATLATMLRAC--AQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMY 357

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG------------------------------ 271
           A+ G    A    ++MI K+ VS + ++ G                              
Sbjct: 358 AKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMI 417

Query: 272 -----------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                       + G   HGY +  G  +  ++ N +++MY+KCG I  SR +F  M  +
Sbjct: 418 ALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNR 477

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
           D +SWNTMI G   +G   EA+  F  ++  GL   + +LI+ LS+C+  G +  G+
Sbjct: 478 DIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGK 534



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 149/325 (45%), Gaps = 21/325 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  ++K G   D  + N+LI++Y + G + +A    DEM  +++VS++ I+SG 
Sbjct: 329 KRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGC 388

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G + +A  +F++M  +G       + ++L AC     +  + G   H   +    T 
Sbjct: 389 VQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHL--AALQHGTCCHGYTVVRGFTN 446

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  + N +I MY  C + T  +R IF+ ++ RD+ISWN++I  Y   G  +    LF  +
Sbjct: 447 DTSICNAIIDMYSKCGKIT-ISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQEL 505

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           Q  G    LKP++ T  ++++A   S  V  G Y      +M +   +   +     +V 
Sbjct: 506 QALG----LKPDDVTLIAVLSACSHSGLVTEGKYWFS---SMSQNFNIKPRMAHYICMVD 558

Query: 240 GFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG- 296
             AR GN   A    ++M    NV     L+   R  K +  G  +   +  +   G G 
Sbjct: 559 LLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGN 618

Query: 297 ---LVNMYAKCGTIDDS---RSVFR 315
              + N+Y+  G  DD+   RS+ R
Sbjct: 619 FVLMSNIYSSVGRWDDAAYIRSIQR 643


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 272/843 (32%), Positives = 431/843 (51%), Gaps = 81/843 (9%)

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +  N+++  Y   L S   A  +F  + TRD+ SWN+I+S Y Q G  ++   +F  M++
Sbjct: 93  ITHNIMMNGYAK-LGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQ 151

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G      PN +TFG ++ +     L    +  Q+L ++ K     D  V +ALV    R
Sbjct: 152 TGDSL---PNAFTFGCVMKSC--GALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVR 206

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
            G   +A K F ++    ++  N ++ G                             YAK
Sbjct: 207 CGAMDFASKQFSRIKNPTIICRNSMLVG-----------------------------YAK 237

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
              +D +  +F+ M  +D VSWN +IS L ++G   EA+     M   G+   + +  S+
Sbjct: 238 SHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSS 297

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L++CA L  +  G+Q+H + ++     D  V++A++ LYA  G      +VF  + + + 
Sbjct: 298 LTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNS 357

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSW  +IG F       SE+V+ +  MR    + +      +++   +     LG Q+H+
Sbjct: 358 VSWTVLIGGFL-QYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHS 416

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER-------------------- 523
             +K        + N+L+S Y KCG + + E IF  M+ER                    
Sbjct: 417 LCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAK 476

Query: 524 ----------RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL-DHFTFATVLSACA 572
                     R+ ++WN+M+  YI +      + +   M+     + D  T+ T+   CA
Sbjct: 477 AREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCA 536

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
            +   + G ++    V+  L  D  + +A++ MYSKCGRI  A + FD +  +++ SWN+
Sbjct: 537 DIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNA 596

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           MI+GY++HG G +A+ +F  +   G  PD++++V VLS CSH+GLV+EG  +F  M + +
Sbjct: 597 MITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDH 656

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
            + P LE FSCMVDLLGRAG L + +  I++MP+ P + +W  +L AC        +L  
Sbjct: 657 NISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSAC--KTHGNNDLAE 714

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
            AA  LF+++   +  Y+LLA MYA  GK +D A+ RK M++  +KK  G SW+ + + V
Sbjct: 715 LAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRV 774

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
           HVF A D SHP+   I EKL EL +K+   GYV           P S+     +HSEK+A
Sbjct: 775 HVFKAEDVSHPQVIAIREKLDELMEKIAHLGYVRTE-------SPRSE----IHHSEKLA 823

Query: 873 VAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
           VAF +++  + +PI IMKNLR+C DCH+  K IS +  RE V+RD  RFHHF  G CSC 
Sbjct: 824 VAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLISTVTDREFVIRDGVRFHHFKGGSCSCM 883

Query: 932 DYW 934
           DYW
Sbjct: 884 DYW 886



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 140/548 (25%), Positives = 238/548 (43%), Gaps = 102/548 (18%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR------------------- 315
            + +H  LI  GL  +V + N L++ Y  CG + D+R++ R                   
Sbjct: 44  ARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPNVITHNIMMNGYA 103

Query: 316 -------------FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG-LMSSNFSLI 361
                         M  +D  SWNT++SG  Q+G +  A+  F +MR+ G  + + F+  
Sbjct: 104 KLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFG 163

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL-------------------- 401
             + SC +LGW  +  Q+ G   K     D  V  AL+ +                    
Sbjct: 164 CVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNP 223

Query: 402 -----------YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
                      YA +  +   L++F  MPE D VSWN VI A + S   V EA+   +DM
Sbjct: 224 TIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKS-GRVREALDMVVDM 282

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
              G  P+  T+ + L A +  S  + G Q+H QVI+     +  + +A++  Y KCG  
Sbjct: 283 HGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCF 342

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
            + +++F+ + + R+ VSW  +I G++      +++ L   M      +D F  AT++S 
Sbjct: 343 KEAKRVFSSLRD-RNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISG 401

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC--------------------- 609
           C +   +  G ++H+  +++     VV+ ++L+ MY+KC                     
Sbjct: 402 CCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSW 461

Query: 610 ----------GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP- 658
                     G I  A  FFD M  RNV +WN+M+  Y +HG  +  L ++S M  +   
Sbjct: 462 TGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDV 521

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL---GRAGELD 715
           +PD VT+V +   C+  G    G +      +V GLI      + ++ +    GR  E  
Sbjct: 522 IPDWVTYVTLFRGCADIGANKLGDQIIGHTVKV-GLILDTSVVNAVITMYSKCGRISEAR 580

Query: 716 KIEEFINK 723
           K  +F+++
Sbjct: 581 KAFDFLSR 588



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 153/625 (24%), Positives = 267/625 (42%), Gaps = 120/625 (19%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +V   N ++N Y ++G L+ A +LF  MP R+  SW  I+SGY   G    A  +F  M 
Sbjct: 91  NVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMR 150

Query: 79  RAG-FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC- 136
           + G  L N +  G V+++C   G    +  +Q+  L+ K +   D  V   L+ M   C 
Sbjct: 151 QTGDSLPNAFTFGCVMKSCGALG--WHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCG 208

Query: 137 -----------------------------LESTDCARRIFEEIETRDLISWNSIISVYSQ 167
                                            D A  IF+ +  RD++SWN +IS  S+
Sbjct: 209 AMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSK 268

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKA 225
            G       +   M  +G R    P+  T+ S +TA    SS+  G  L  Q++  +   
Sbjct: 269 SGRVREALDMVVDMHGKGVR----PDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHI 324

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------- 274
               D YV SA+V  +A+ G F  A+++F  +  +N VS   L+ G  +           
Sbjct: 325 ----DPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELF 380

Query: 275 ------------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
                                         G ++H   ++SG    V V N L++MYAKC
Sbjct: 381 NQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKC 440

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA-----------IMNFCAM----- 348
           G + ++  +F FM  +D VSW  MI+   Q G   +A           ++ + AM     
Sbjct: 441 GNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYI 500

Query: 349 ----RRDGL-MSSNF-----------SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
                 DGL M S+            + ++    CA +G   LG QI G  +K+GL  D 
Sbjct: 501 QHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDT 560

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
           SV NA++++Y+  G +S   K F  +   D VSWN++I  ++    +  +A++ + D+  
Sbjct: 561 SVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYS-QHGMGKQAIEIFDDILN 619

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTIENALLSCYGKCGEM 510
            G  P+ ++++ +L+  S   + + G + +  ++K  +N++      + ++   G+ G +
Sbjct: 620 KGAKPDYISYVAVLSGCSHSGLVEEG-KFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHL 678

Query: 511 DDCEKIFARMSERRDEVSWNSMISG 535
            + + +   M  +     W +++S 
Sbjct: 679 IEAKNLIDEMPMKPTAEVWGALLSA 703



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 179/373 (47%), Gaps = 37/373 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H+Q++++    D ++ + ++ +Y + G    A ++F  + DRNSVSW  ++ G+   
Sbjct: 311 KQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQY 370

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G  +E+ ++F +M      ++++AL +++  C  C       G Q+H L LKS  T   +
Sbjct: 371 GCFSESVELFNQMRAELMAVDQFALATLISGC--CNTMDICLGSQLHSLCLKSGHTRAVV 428

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           VSN LI+MY  C  +   A  IF  +  RD++SW  +I+ YSQ G+     + F  M   
Sbjct: 429 VSNSLISMYAKC-GNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTR 487

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                   N  T+ +++  AY    +    L+    M+ +  ++ D      L  G A +
Sbjct: 488 --------NVITWNAML-GAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADI 538

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
           G    A K+ +Q+I                     G+ ++ GL    +V N ++ MY+KC
Sbjct: 539 G----ANKLGDQII---------------------GHTVKVGLILDTSVVNAVITMYSKC 573

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G I ++R  F F+  KD VSWN MI+G  Q+G  ++AI  F  +   G      S ++ L
Sbjct: 574 GRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVL 633

Query: 365 SSCASLGWIMLGQ 377
           S C+  G +  G+
Sbjct: 634 SGCSHSGLVEEGK 646



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 18/151 (11%)

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
           E +V+  + +++ Y+K G +  A   F  MP R+V SWN+++SGY + G    AL +F  
Sbjct: 89  EPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVS 148

Query: 653 MKLDG-PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ------FSCMV 705
           M+  G  LP+  TF  V+ +C   G  +          Q+ GL+ + +        + +V
Sbjct: 149 MRQTGDSLPNAFTFGCVMKSCGALGWHEVAL-------QLLGLLSKFDSQDDPDVQTALV 201

Query: 706 DLLGRAGELD----KIEEFINKMPITPNSLI 732
           D+L R G +D    +     N   I  NS++
Sbjct: 202 DMLVRCGAMDFASKQFSRIKNPTIICRNSML 232


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 269/724 (37%), Positives = 408/724 (56%), Gaps = 39/724 (5%)

Query: 221 MVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ--MIQKNVVSMNGLMEGRRKGKEV 278
           MV+   L S+    ++ +S + R+G+ + ARK+F+   + Q+ + S N ++    +  + 
Sbjct: 13  MVQARSLCSN----TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKP 68

Query: 279 HGYLIRSGLFDMVAVGN-----GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
              L+   LFD +   N     G+++ Y K G + D+R VF  M  ++ VSW +M+ G  
Sbjct: 69  RDALL---LFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYV 125

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           Q G  EEA   F  M R  ++S    +   L          L   I         + DV 
Sbjct: 126 QEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIP--------EKDVV 177

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V   ++  Y   G L    ++F  M   +  +W +++  +A +   V  A K +  M   
Sbjct: 178 VVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKN-GRVDVARKLFEVMPER 236

Query: 454 GWSPNGVTFINILAA-ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
               N V++  +L     S  M +      A  +K+ VA      N ++  +G  GEM  
Sbjct: 237 ----NEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVAC-----NEMILQFGLAGEMHR 287

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
              +F  M ER DE +WN+MI  +    L  +A+ L   M + G  L+  +  +VLS CA
Sbjct: 288 ARMMFEGMKER-DEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCA 346

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
           S+A+L+ G +VHA  VR+  + D+ + S L+ MY KCG +  A   F+    ++V  WNS
Sbjct: 347 SLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNS 406

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           MI+GY++HG G++AL +F  M   G  PD VTF+GVLSACS++G V EGF+ F++M   Y
Sbjct: 407 MITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTY 466

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
            + P +E ++CMVDLLGRAG +D+  E + KMP+ P++++W  +LGAC   N  K +L  
Sbjct: 467 QVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGAC--RNHMKLDLAE 524

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
            A   L ++EP+NA  YVLL++MYA+ G+W DV   RK +    V K  GCSW+ ++  V
Sbjct: 525 VAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINR-RVIKFPGCSWIEVEKKV 583

Query: 813 HVFVAGD-ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
           H+F  GD +SHPE+ +I + L++L+  +R+AGY P   F L D++ E K   + YHSE++
Sbjct: 584 HMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGYHSERL 643

Query: 872 AVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           AVA+ L +  + +PIR+MKNLRVCGDCHSA K I+K+ GREI+LRD+NRFHHF DG CSC
Sbjct: 644 AVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGSCSC 703

Query: 931 GDYW 934
            D+W
Sbjct: 704 KDFW 707



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 142/558 (25%), Positives = 261/558 (46%), Gaps = 50/558 (8%)

Query: 103 GFKFGMQVHCLVLKSNQTFDGLVSNV-LIAMYGSCLESTDCARRIFE--EIETRDLISWN 159
           G+ +   + C ++++      L SN   I+ YG  +     AR++F+   +  R + SWN
Sbjct: 2   GYGYAATLRCRMVQARS----LCSNTSAISRYGR-IGDIHNARKVFDNTPLPQRTIASWN 56

Query: 160 SIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQIL 219
           +++S Y +         LF +M +                  T +++ ++SG Y+   ++
Sbjct: 57  AMVSAYFESHKPRDALLLFDQMPQRN----------------TVSFNGMISG-YVKNGMV 99

Query: 220 AMVKKA-GLLSDLYVGS--ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGK 276
           A  +K   ++ +  V S  ++V G+ + G    A K+F +M ++NVVS   ++ G  K  
Sbjct: 100 ADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKES 159

Query: 277 EVHGYLIRSGLFDM-----VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
            +        LFDM     V V   ++  Y + G +D++R +F  M  ++  +W TM+SG
Sbjct: 160 RIDDA---KKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSG 216

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
             +NG  + A   F  M     +S    L         +G+   G+      L   +   
Sbjct: 217 YAKNGRVDVARKLFEVMPERNEVSWTAML---------MGYTQSGRMKEAFELFEAMPVK 267

Query: 392 VSVS-NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
             V+ N ++  +  AG + R   +F  M E D+ +WN++I  F + + L  EA+  +  M
Sbjct: 268 WIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVF-ERKGLDLEALGLFARM 326

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
           +R G + N  + I++L+  +S +    G QVHA++++     +  + + L++ Y KCG++
Sbjct: 327 QREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDL 386

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
              + IF R    +D V WNSMI+GY  + L  +A+N+   M   G + D  TF  VLSA
Sbjct: 387 VRAKGIFNRFL-FKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSA 445

Query: 571 CASVATLERGMEV-HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVY 628
           C+    ++ G E+  A      +E  +   + +VD+  + GR+D A    + MP+  +  
Sbjct: 446 CSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAI 505

Query: 629 SWNSMISGYARHGHGDKA 646
            W +++     H   D A
Sbjct: 506 VWGALLGACRNHMKLDLA 523



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 211/446 (47%), Gaps = 56/446 (12%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N +I+ YV+ G +A A K+FD MP+RN VSW  +V GY  +GM  EA K+F EM R   +
Sbjct: 87  NGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVV 146

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY----GSC-LE 138
                +G +L+  +                +  + + FD +    ++ +     G C + 
Sbjct: 147 SWTVMIGGLLKESR----------------IDDAKKLFDMIPEKDVVVVTNMIGGYCQVG 190

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-QREGFRYSLKPNEYTF 197
             D AR +F+E++ R++ +W +++S Y++ G      KLF  M +R    ++     YT 
Sbjct: 191 RLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQ 250

Query: 198 GSLITAAYSSVLSGSYLLQQILA---MVKKAGLLSDLY---------------VGSALVS 239
              +  A+   L  +  ++ I+A   M+ + GL  +++                 +A++ 
Sbjct: 251 SGRMKEAFE--LFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIK 308

Query: 240 GFARLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRRKGKEVHGYLIRSGLFD 289
            F R G    A  +F +M ++          +V+S+   +     G++VH  L+RS    
Sbjct: 309 VFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQ 368

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
            + V + L+ MY KCG +  ++ +F   + KD V WN+MI+G  Q+G  EEA+  F  M 
Sbjct: 369 DLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMC 428

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN--ALLSLYADAGY 407
             G+     + I  LS+C+  G +  G +I  E +K     +  + +   ++ L   AG 
Sbjct: 429 SSGVQPDEVTFIGVLSACSYSGKVKEGFEIF-EAMKCTYQVEPGIEHYACMVDLLGRAGR 487

Query: 408 LSRCLKVFFLMP-EHDQVSWNSVIGA 432
           +   +++   MP E D + W +++GA
Sbjct: 488 VDEAMELVEKMPMEPDAIVWGALLGA 513



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 2/107 (1%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H ++++  F  D+++ + LI +YV+ GDL  A  +F+    ++ V W  +++GY+  G+ 
Sbjct: 358 HARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLG 417

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKFGMQVHC 112
            EA  +F +M  +G   +      VL AC   G    GF+    + C
Sbjct: 418 EEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKC 464


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 279/891 (31%), Positives = 466/891 (52%), Gaps = 89/891 (9%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G ++H L+L++       +   L+AMY  C  S + AR +F+ I+ + +++W S+I V +
Sbjct: 59  GRRIHGLILRNGIEVGDFLGARLLAMYCKC-GSPEEARAVFQGIQDKSVVAWTSLIGVNA 117

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
           + G     F LF  MQ +G    + PN+ T+ +++ A         + +  I A V+  G
Sbjct: 118 RSGHPKEAFHLFREMQLQG----VMPNDVTYVAVLGAC-----GHPWEVDTIRARVEACG 168

Query: 227 LLS-DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG---LMEGRRKGKE----- 277
            L  D+ V +A+++ + + G+   A  +F+ ++ ++    N    L+    +G E     
Sbjct: 169 SLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELF 228

Query: 278 ---------------------------------VHGYLIR-SGLFDMVAVGNGLVNMYAK 303
                                            +H +    +G  D V V   LVNMY K
Sbjct: 229 RQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTV-VQTALVNMYGK 287

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
            G +DD+  +F  +  +D VSWN M++    NG +++A   F  M   G + S  + ++ 
Sbjct: 288 FGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAI 347

Query: 364 LSSCASLGWIMLGQQIHGEGLKL-------GLDS-DVSVSNALLSLYADAGYLSRCLKV- 414
           L++C      +     HG+ +K        G++S DV +  A++++Y      SRC    
Sbjct: 348 LNAC-----FLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMY------SRCKSPK 396

Query: 415 ------FFLMPEHDQVS---WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
                   L  + DQ S   WN+V+  + ++E    EA   +  M   G + + V+ + +
Sbjct: 397 SAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQF-EEAFTIFRLMLLGGVTIDTVSLMTV 455

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
             A  S +  + G  +H+ + +  +  +T ++NAL++ Y + G ++D  +IF  M+ R +
Sbjct: 456 FNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTR-N 514

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
            +SW +M+  +    L  +A+ +   ++  G   +  TF  VL+AC ++A++     V A
Sbjct: 515 VISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQA 574

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
           C        +V + + L+    KCG ++  + FF +M V+N  SWN+ I+  A+HG+G +
Sbjct: 575 CLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVR 634

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
            + LF  M+L+G     VT +GVLS+CSHAGLV +G+ +F +M   YG   + E +SC++
Sbjct: 635 GVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVI 694

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLI-WRTVLGACCRANCRKTELGRKAANMLFEMEPQ 764
           DLL RAG L+  EEF+ ++P    S+  W T+L  C        E G +A   +  + P 
Sbjct: 695 DLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHG--DLERGGRATQRILGLNPG 752

Query: 765 NAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPE 824
           +   Y+++ N+YA  GKW + A  RK+M E   KKE G SW+ +K  +H F  GD SHP 
Sbjct: 753 STGPYLVMHNLYAGAGKWPEAAAVRKSMVELGPKKEPGLSWIEVKGRIHEFRVGDTSHPR 812

Query: 825 KDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKL 883
              I+ +L+ LN++M+ AG+V   K  ++DL+ + KE L+  HSEK+A+AF +++  +  
Sbjct: 813 SSEIHRELERLNEEMKRAGFVCDIKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAGE 872

Query: 884 PIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           P+RIMKNLRVC DCHSA KFIS +VGREIV+RD+ RFHHF  G CSC D+W
Sbjct: 873 PLRIMKNLRVCSDCHSATKFISGLVGREIVVRDAYRFHHFRGGACSCEDFW 923



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 256/531 (48%), Gaps = 25/531 (4%)

Query: 254 FEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
           F  +I K    ++ L +GRR    +HG ++R+G+     +G  L+ MY KCG+ +++R+V
Sbjct: 43  FAALIHK-CARLHDLAQGRR----IHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAV 97

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           F+ +  K  V+W ++I    ++G  +EA   F  M+  G+M ++ + ++ L +C    W 
Sbjct: 98  FQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGH-PWE 156

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
           +   +   E     L+ DV V+ A+++ Y   G L     VF  +   D   WN++I   
Sbjct: 157 VDTIRARVEACG-SLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLL 215

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE 493
              E    EA++ +  MR  G +PN  T +  L A           ++HA   +     +
Sbjct: 216 VAHEQ-GDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDAD 274

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM 553
           T ++ AL++ YGK G++DD E+IF R+ E RD VSWN+M++    N    KA      M+
Sbjct: 275 TVVQTALVNMYGKFGKVDDAEEIFERIQE-RDVVSWNAMLTANACNGFHDKAFKCFREML 333

Query: 554 QRGQRLDHFTFATVLSACASVATLERGMEVH------ACGVRACLEFDVVIGSALVDMYS 607
             G+     T+  +L+AC   A L+ G  V        CG+ +    DVV+G+A+++MYS
Sbjct: 334 LVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIES---VDVVMGTAIMNMYS 390

Query: 608 KCGRIDYA-SRFFDLMPVRN---VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           +C     A S    L   R+   +  WN+++S Y  +   ++A T+F  M L G   D V
Sbjct: 391 RCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTV 450

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           + + V +AC  +  +++G K   S+     L  +    + +V +  R G L+   E  + 
Sbjct: 451 SLMTVFNACGSSASLEKG-KWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDA 509

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
           M  T N + W  ++G   +    +  L R   ++L E    N V +  + N
Sbjct: 510 M-TTRNVISWTAMVGVHSQLGLNREAL-RIFRSILLEGVAPNEVTFTAVLN 558



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 167/693 (24%), Positives = 302/693 (43%), Gaps = 74/693 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H  IL++G     FL   L+ +Y + G    A  +F  + D++ V+W  ++      
Sbjct: 60  RRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQGIQDKSVVAWTSLIGVNARS 119

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   EA  +F+EM   G + N     +VL AC               C  L+     D +
Sbjct: 120 GHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVDTIRARVEACGSLE----LDVI 175

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS--VYSQRGDTISVFKLFSRMQ 182
           V+  ++  YG C +  D A  +F+ I  RD   WN++IS  V  ++GD     +LF +M+
Sbjct: 176 VATAVMNAYGKCGD-LDSAWGVFDGILVRDAAVWNAMISLLVAHEQGD--EALELFRQMR 232

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             G    + PN+ T  + + A   S      L  +I A  ++    +D  V +ALV+ + 
Sbjct: 233 LGG----VTPNKGTCVAALNACCHSRDFSEAL--RIHAFARELAGDADTVVQTALVNMYG 286

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------RKGKEV-------------- 278
           + G    A +IFE++ +++VVS N ++             +  +E+              
Sbjct: 287 KFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVA 346

Query: 279 ------------HGYLIRS-------GLFDM-VAVGNGLVNMYAKCGTIDDS-RSVFRFM 317
                       HG  +++       G+  + V +G  ++NMY++C +   +  S     
Sbjct: 347 ILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLE 406

Query: 318 IGKDSVS---WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             +D  S   WNT++S   +N  +EEA   F  M   G+     SL++  ++C S   + 
Sbjct: 407 QDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLE 466

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
            G+ IH    +  L     V NAL+++YA  G L    ++F  M   + +SW +++G  +
Sbjct: 467 KGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHS 526

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANET 494
               L  EA++ +  +   G +PN VTF  +L A  + +       V A + +       
Sbjct: 527 QL-GLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNV 585

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
            + N LL   GKCG +++    F  M+  +++VSWN+ I+    +    + + L   M  
Sbjct: 586 EVANGLLCTLGKCGSLEEVANFFQVMA-VKNQVSWNTAIAANAQHGNGVRGVELFQTMQL 644

Query: 555 RGQRLDHFTFATVLSACASVATLERG----MEVHACGVRACLEFDVVIGSALVDMYSKCG 610
            G      T   VLS+C+    + +G    + +H   V      +    S ++D+ S+ G
Sbjct: 645 EGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMH---VDYGFPAEAEHYSCVIDLLSRAG 701

Query: 611 RIDYASRFFDLMPV--RNVYSWNSMISGYARHG 641
            +++A  F   +P   ++V+ W +++ G   HG
Sbjct: 702 WLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHG 734



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 37/280 (13%)

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           D  TFA ++  CA +  L +G  +H   +R  +E    +G+ L+ MY KCG  + A   F
Sbjct: 39  DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVF 98

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
             +  ++V +W S+I   AR GH  +A  LF +M+L G +P+ VT+V VL AC H   VD
Sbjct: 99  QGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVD 158

Query: 680 -----------------------EGFKHFKSMSQVYG-----LIPQLEQFSCMVDLLGRA 711
                                    +     +   +G     L+     ++ M+ LL   
Sbjct: 159 TIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAH 218

Query: 712 GELDKIEEFINKM---PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
            + D+  E   +M    +TPN       L ACC +      L   A       +    V 
Sbjct: 219 EQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQ 278

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
             L+ NMY   GK +D  +  + ++E +V      SW  M
Sbjct: 279 TALV-NMYGKFGKVDDAEEIFERIQERDV-----VSWNAM 312


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 256/652 (39%), Positives = 391/652 (59%), Gaps = 21/652 (3%)

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           N L++ YAK   ++ +  +F  M   DSVS+NT+I+   + G  + A   F  MR   L 
Sbjct: 78  NTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLD 137

Query: 355 SSNFSLISTLSSCA-SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
              F+L   +++C  ++G I   +Q+H   +  GLDS VSV NAL++ Y+  G+L    +
Sbjct: 138 MDGFTLSGIITACGINVGLI---RQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARR 194

Query: 414 VF-FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
           +F +L  + D+VSWNS++ A+       S+A++ YL+M   G   +  T  ++L A ++ 
Sbjct: 195 IFHWLSEDRDEVSWNSMVVAYMQHRE-GSKALELYLEMTVRGLIVDIFTLASVLTAFTNV 253

Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE-MDDCEKIFARMSERRDEVSWNS 531
                G Q HA++IK      + + + L+  Y KCG  M DC K+F  +S   D V WN+
Sbjct: 254 QDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP-DLVLWNT 312

Query: 532 MISGY-IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           MISGY ++ +L  +A+     +   G R D  +   V+SAC+++++  +G +VH   ++ 
Sbjct: 313 MISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKL 372

Query: 591 CLEFD-VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
            +  + + + +AL+ MYSKCG +  A   FD MP  N  S+NSMI+GYA+HG G ++L L
Sbjct: 373 DIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHL 432

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           F +M   G  P ++TF+ VL+AC+H G V++G  +F  M Q +G+ P+   FSCM+DLLG
Sbjct: 433 FQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLG 492

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVN 768
           RAG+L + E  I  +P  P    W  +LGAC    N    EL  KAAN L +++P NA  
Sbjct: 493 RAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGN---VELAIKAANRLLQLDPLNAAP 549

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
           YV+LAN+Y+  G+ +D A  RK M++  VKK+ GCSW+ +   +H+FVA D  HP    I
Sbjct: 550 YVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKI 609

Query: 829 YEKLKELNQKMRDAGYVPQTKFALF---DLEPESKEDL-VSYHSEKIAVAFVL--TRNSK 882
            E L+E+ +K++  GY P+ + AL    D   + +E+L + +HSEK+AV+F L  TR  +
Sbjct: 610 QEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTREGE 669

Query: 883 LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            PI + KNLR+C DCH+A K+IS++V REI +RDS+RFH F DG+CSCG YW
Sbjct: 670 -PILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 217/445 (48%), Gaps = 59/445 (13%)

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           D +V   N L+S YA   Y+    ++F  MP+ D VS+N++I A+A        A + +L
Sbjct: 71  DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYA-RRGDTQPAFQLFL 129

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
           +MR A    +G T   I+ A    ++G L  Q+HA  +   + +  ++ NAL++ Y K G
Sbjct: 130 EMREAFLDMDGFTLSGIITAC-GINVG-LIRQLHALSVVTGLDSYVSVGNALITSYSKNG 187

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
            + +  +IF  +SE RDEVSWNSM+  Y+ +    KA+ L   M  RG  +D FT A+VL
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR-FFDLMPVRNV 627
           +A  +V  L  G++ HA  +++    +  +GS L+D+YSKCG      R  FD +   ++
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDL 307

Query: 628 YSWNSMISGYARHGH-GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
             WN+MISGY+ +    D+AL  F Q+++ G  PD  + V V+SACS+     +G     
Sbjct: 308 VLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQG----- 362

Query: 687 SMSQVYGLIPQLEQFS-------CMVDLLGRAGELDKIEEFINKMP-------------- 725
              QV+GL  +L+  S        ++ +  + G L   +   + MP              
Sbjct: 363 --RQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGY 420

Query: 726 --------------------ITPNSLIWRTVLGACCRANCRKTELGRKAANML---FEME 762
                                TP ++ + +VL AC  A+  + E G+   NM+   F +E
Sbjct: 421 AQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAAC--AHTGRVEDGKIYFNMMKQKFGIE 478

Query: 763 PQNAVNYVLLANMYASGGKWEDVAK 787
           P+ A ++  + ++    GK  +  +
Sbjct: 479 PE-AGHFSCMIDLLGRAGKLSEAER 502



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 123/516 (23%), Positives = 224/516 (43%), Gaps = 103/516 (19%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASK-------------------- 41
           +  K  H   +K       +L N  + +Y +   L++A +                    
Sbjct: 25  RTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAY 84

Query: 42  -----------LFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
                      LFDEMP  +SVS+  +++ Y  +G +  A ++F EM  A   ++ + L 
Sbjct: 85  AKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLS 144

Query: 91  SVLRACQECGPSGFKFGM--QVHCLVLKSNQTFDGLVSNVLIAMY---GSCLESTDCARR 145
            ++ AC      G   G+  Q+H L + +       V N LI  Y   G   E    ARR
Sbjct: 145 GIITAC------GINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKE----ARR 194

Query: 146 IFEEI-ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA- 203
           IF  + E RD +SWNS++  Y Q  +     +L+  M   G    L  + +T  S++TA 
Sbjct: 195 IFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRG----LIVDIFTLASVLTAF 250

Query: 204 -AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN-FYYARKIFEQMIQKN 261
                +L G     Q  A + K+G   + +VGS L+  +++ G      RK+F+++   +
Sbjct: 251 TNVQDLLGG----LQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPD 306

Query: 262 VVSMNGLMEG------------------------------------------RRKGKEVH 279
           +V  N ++ G                                            +G++VH
Sbjct: 307 LVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVH 366

Query: 280 GYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           G  ++  +  + ++V N L+ MY+KCG + D++++F  M   ++VS+N+MI+G  Q+G  
Sbjct: 367 GLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMG 426

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ-QIHGEGLKLGLDSDVSVSNA 397
            +++  F  M   G   +N + IS L++CA  G +  G+   +    K G++ +    + 
Sbjct: 427 FQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSC 486

Query: 398 LLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           ++ L   AG LS   ++   +P +     W++++GA
Sbjct: 487 MIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGA 522



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 9/139 (6%)

Query: 559 LDHFT-----FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID 613
           + HF+     F   L  C +   L  G  +HA  +++ +     + +  + +YSKC R+ 
Sbjct: 1   MHHFSSLLHNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLS 60

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
            A R FD     NV+S+N++IS YA+  + + A  LF +M    P PD V++  +++A +
Sbjct: 61  AARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEM----PQPDSVSYNTLIAAYA 116

Query: 674 HAGLVDEGFKHFKSMSQVY 692
             G     F+ F  M + +
Sbjct: 117 RRGDTQPAFQLFLEMREAF 135


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/625 (39%), Positives = 370/625 (59%), Gaps = 15/625 (2%)

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D  SWN++I+ L + G   E++  F  MR+  +  +  +    + SC++L  +  G+Q H
Sbjct: 46  DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAH 105

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
            + L  G +SD+ VS+AL+ +Y+  G LS    +F  +P  + V+W S+I  +  ++   
Sbjct: 106 QQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDD-A 164

Query: 441 SEAVKYYLDM---------RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA 491
            EA+  + +             G S + V  I++L+A S  S   +   VH   IK  + 
Sbjct: 165 HEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLD 224

Query: 492 NETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWF 551
               +EN LL  Y KCGE+    K+F  M+E+ D VSWNSMI+ Y  N L   A  +   
Sbjct: 225 KVMGVENTLLDAYAKCGEVSLSRKVFDDMAEK-DVVSWNSMIAVYAQNGLSTDAFEVFHG 283

Query: 552 MMQRGQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCG 610
           M++ G  + +  T +T+L ACA    L  GM +H   ++     +V++ ++++DMY KCG
Sbjct: 284 MLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCG 343

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
           + + A   FD M  +NV SW +MI+GY  HG   +AL +F QM   G  P+++TF+ VL+
Sbjct: 344 QAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLA 403

Query: 671 ACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNS 730
           ACSHAG ++EG++ F +MS  Y + P +E + CMVDLLGRAG + +    I  M +  + 
Sbjct: 404 ACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDF 463

Query: 731 LIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARK 790
           ++W ++L A CR + +  EL   +A  LF+++P N   YVLLAN+YA  G+W+DV + R 
Sbjct: 464 VLWGSLLAA-CRIH-KDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRI 521

Query: 791 AMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKF 850
            +K+  + K  G S V +K  VHVF+ GD+ HP+ + IY+ L+EL+ K+++AGYVP    
Sbjct: 522 LVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPNMAS 581

Query: 851 ALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVG 909
            L D++ E KE +V  HSEK+AVAF V+       I ++KNLRVCGDCH+  K ISKIV 
Sbjct: 582 VLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIKLISKIVS 641

Query: 910 REIVLRDSNRFHHFNDGKCSCGDYW 934
           REI++RD+ RFHHF DG CSCGDYW
Sbjct: 642 REIIVRDAKRFHHFKDGLCSCGDYW 666



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 202/443 (45%), Gaps = 64/443 (14%)

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA--AYSSVLSG 211
           D+ SWNS+I+  ++ GD+    + FS M++      +KPN  TF   I +  A   + SG
Sbjct: 46  DVYSWNSLIAELARGGDSCESLRAFSWMRK----LDIKPNRSTFPCAIKSCSALFDLNSG 101

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
               QQ L      G  SDL+V SAL+  +++ G    AR +F+++ ++N+V+   L+ G
Sbjct: 102 KQAHQQALVF----GFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITG 157

Query: 272 ----------------------RRKGKEV----------------------------HGY 281
                                    G+EV                            HG 
Sbjct: 158 YVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGV 217

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
            I+ GL  ++ V N L++ YAKCG +  SR VF  M  KD VSWN+MI+   QNG   +A
Sbjct: 218 AIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDA 277

Query: 342 IMNFCAMRRDGLMSSNFSLIST-LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
              F  M + G    N   +ST L +CA  G + +G  +H + +K+G  ++V ++ +++ 
Sbjct: 278 FEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIID 337

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +Y   G        F  M E +  SW ++I  +        EA+  +  M  AG  PN +
Sbjct: 338 MYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYG-MHGFAREALDVFYQMIWAGVKPNYI 396

Query: 461 TFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           TFI++LAA S     + G +  +A   +YNV         ++   G+ G + +   +   
Sbjct: 397 TFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKS 456

Query: 520 MSERRDEVSWNSMISG-YIHNEL 541
           M  RRD V W S+++   IH ++
Sbjct: 457 MKVRRDFVLWGSLLAACRIHKDV 479



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 227/493 (46%), Gaps = 55/493 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q L  GF  D+F+ + LI++Y + G L++A  LFDE+P RN V+W  +++GY   
Sbjct: 102 KQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQN 161

Query: 65  GMSNEACKMFKEMV---------RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVL 115
             ++EA  +FKE +           G  ++  A+ SVL AC          G  VH + +
Sbjct: 162 DDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEG--VHGVAI 219

Query: 116 KSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVF 175
           K        V N L+  Y  C E    +R++F+++  +D++SWNS+I+VY+Q G +   F
Sbjct: 220 KVGLDKVMGVENTLLDAYAKCGE-VSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAF 278

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLS-GSYLLQQILAMVKKAGLLSDLYV 233
           ++F  M + G     K NE T  +L+ A A+   L  G  L  Q++ M    G ++++ +
Sbjct: 279 EVFHGMLKAG---GGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKM----GYVNNVIM 331

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGL 287
            ++++  + + G    AR  F+ M +KNV S   ++ G       R+  +V   +I +G+
Sbjct: 332 ATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGV 391

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEA- 341
                    ++   +  G +++    F  M  + +V      +  M+  L + G  +EA 
Sbjct: 392 KPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAY 451

Query: 342 -IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
            ++    +RRD ++       S L++C     + L +    E  KL   S+      L +
Sbjct: 452 NLIKSMKVRRDFVLWG-----SLLAACRIHKDVELAEISARELFKLD-PSNCGYYVLLAN 505

Query: 401 LYADAGYLSRCLKVFFLM--------PEHDQVSWNSVIGAF--ADSEALVSEAVKYYLD- 449
           +YADAG      ++  L+        P +  V     +  F   D E    E +  YL+ 
Sbjct: 506 IYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEE 565

Query: 450 ----MRRAGWSPN 458
               ++ AG+ PN
Sbjct: 566 LSVKLQEAGYVPN 578



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 192/443 (43%), Gaps = 55/443 (12%)

Query: 40  SKLFDEMPDRNSV-SWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQE 98
           + LF++  DR  V SW  +++     G S E+ + F  M +     NR      +++C  
Sbjct: 35  TTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCS- 93

Query: 99  CGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISW 158
                   G Q H   L      D  VS+ LI MY  C + ++ AR +F+EI  R++++W
Sbjct: 94  -ALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSN-ARVLFDEIPRRNIVTW 151

Query: 159 NSIISVYSQRGD---TISVFK--LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY 213
            S+I+ Y Q  D    + VFK  LF + +  G       +     S+++A   S +S   
Sbjct: 152 TSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSAC--SRVSNKA 209

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM---- 269
           + + +  +  K GL   + V + L+  +A+ G    +RK+F+ M +K+VVS N ++    
Sbjct: 210 VSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYA 269

Query: 270 -------------------------------------EGR-RKGKEVHGYLIRSGLFDMV 291
                                                EG  R G  +H  +I+ G  + V
Sbjct: 270 QNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNV 329

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
            +   +++MY KCG  + +R+ F  M  K+  SW  MI+G   +G   EA+  F  M   
Sbjct: 330 IMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWA 389

Query: 352 GLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
           G+  +  + IS L++C+  G++  G +  +    +  ++  V     ++ L   AGY+  
Sbjct: 390 GVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKE 449

Query: 411 CLKVFFLMP-EHDQVSWNSVIGA 432
              +   M    D V W S++ A
Sbjct: 450 AYNLIKSMKVRRDFVLWGSLLAA 472



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 9/167 (5%)

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F +  +R D  SWNS+I+         +++    +M +   + +  TF   + +C+++ 
Sbjct: 37  LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            L  G + H   +    E D+ + SAL+DMYSKCG++  A   FD +P RN+ +W S+I+
Sbjct: 97  DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156

Query: 636 GYARHGHGDKALTLFSQMKLD---------GPLPDHVTFVGVLSACS 673
           GY ++    +AL +F +   +         G   D V  + VLSACS
Sbjct: 157 GYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACS 203


>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
 gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
          Length = 1096

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 299/962 (31%), Positives = 492/962 (51%), Gaps = 87/962 (9%)

Query: 24   NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
            N ++N+Y + G +  A  +F+ +P+RN VSW  +++     G   +A ++F+ M   G +
Sbjct: 165  NAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSV 224

Query: 84   L-NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG--LVSNVLIAMYGSCLEST 140
              N     SV+ AC          G   H  ++++   FD    V N L+ MYG C  S 
Sbjct: 225  RPNDATFVSVVDACSNL--LDLPRGKSTHERIIRTG--FDSYLFVGNSLVNMYGKC-GSV 279

Query: 141  DCARRIFEEIETRDLIS---WNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
            D AR +FE++  RD++S   W  II+ ++  G  +  F LF +M  EG    + PN+ TF
Sbjct: 280  DHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEG----VLPNKVTF 335

Query: 198  GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
             +++ A  +         ++I A VK  GL  D  +G+A VS FA+LG+   AR +FE +
Sbjct: 336  VTVLRACTTLAQC-----EKIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENL 390

Query: 258  -IQKNVVSMNGLM--------------------------------------EGRRKGKEV 278
               +NVVS   ++                                      E   + +++
Sbjct: 391  GSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCEPNAVTFMAVMDSCLRPEDLPRAEQI 450

Query: 279  HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
            H +++ SG    V +   LV MY KCG++D + S+F  +  +  V+WN+M+S    NGCY
Sbjct: 451  HAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCY 510

Query: 339  EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
            E ++  +  M  +G      + ++ L +C S+       +         L+ D++  NA 
Sbjct: 511  ERSLKLYERMLLEGTKPDKITYLAVLDACQSV------SEARRYAATFELELDIAARNAA 564

Query: 399  LSLYADAGYLSRCLKVF-FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
            +S YA  G L      F  +  +++ V+WN++I   A       +A++ +  M   G   
Sbjct: 565  VSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQ-HGESKQALECFWKMELEGVRA 623

Query: 458  NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
            N VT++  L A SS      G Q+HA+++  N+ +E  + NA+++ YGKCG +D+    F
Sbjct: 624  NSVTYLASLEACSSLKDLTRGRQLHARILLENI-HEANLSNAVINMYGKCGSLDEAMDEF 682

Query: 518  ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
             +M ER D +SWN+MI+ Y  +    +A+     M   G   D  T+   + AC SV +L
Sbjct: 683  VKMPER-DVISWNTMIATYAQHGSGRQALEFFKQMDLEGWTPDRATYLGAIDACGSVPSL 741

Query: 578  ERGMEVHACGVRA--CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
              G  +H+    A  CLE D  + +ALV MY++CG +  A   F     RN+ +W+++I+
Sbjct: 742  ALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIA 801

Query: 636  GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLV-DEGFKHFKSMSQVYGL 694
              A+HG  ++AL LF +M+L G  PD +TF  +++ACS  G+V D G + F ++ +VY +
Sbjct: 802  ACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGGRRIFDALGRVYPV 861

Query: 695  IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
                E + CMV++LGRAG+L++ E  I  MP   +  IW  +L AC R      E G +A
Sbjct: 862  SASAEHYGCMVEVLGRAGKLEEAEGLIQGMPRKASGAIWMALLAACNRRG--DLERGIRA 919

Query: 755  ANMLFEMEPQN-AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC-SWVTMKDGV 812
            AN   +++P + A +  +LA +Y + G+WED A+ RKA++    ++E G  SW+ + + V
Sbjct: 920  ANRAQQLDPGSFAASMAMLAELYGAAGRWEDAARVRKAVESRNARREPGGRSWIEVNNRV 979

Query: 813  HVFVAGDE--SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
            H F   D+    P  D I  +L+ L+    + G + + + A   +       L   HSEK
Sbjct: 980  HEFGEDDDRLQGPRLDKIRGELQRLSSLAVEEGGICKDENARAHI-------LGCCHSEK 1032

Query: 871  IAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFN-DGKC 928
            +A+ F +++  +   IRI+KNLR C DCH+  KF+S+ + REI +RD    H F+ +G C
Sbjct: 1033 VAIGFGIVSTPAGQLIRIVKNLRACHDCHAFAKFVSRRIQREISVRDPYGLHCFHTNGSC 1092

Query: 929  SC 930
            SC
Sbjct: 1093 SC 1094



 Score =  301 bits (772), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 227/811 (27%), Positives = 384/811 (47%), Gaps = 85/811 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           KL H  IL  G   + +L N LI +Y + G L  A ++F+ +P  N  SW  +++ Y  +
Sbjct: 46  KLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAVEVFELLPCPNVFSWTALITAYAKE 105

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVH-CLVLKSNQTFDG 123
           G   E    F++M   G   + +   +VL AC   G      G  +H C+VL   +T   
Sbjct: 106 GHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAG--ALNEGKAIHDCVVLAGMET--Q 161

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +V N ++ +YG C    + A+ +FE +  R+L+SWN++I+  +Q G      ++F  M  
Sbjct: 162 VVGNAIVNLYGKCGRVHE-AKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDL 220

Query: 184 EGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           +G   S++PN+ TF S++ A  +   +  G    ++I+    + G  S L+VG++LV+ +
Sbjct: 221 DG---SVRPNDATFVSVVDACSNLLDLPRGKSTHERII----RTGFDSYLFVGNSLVNMY 273

Query: 242 ARLGNFYYARKIFEQMIQKNVVSM------------NGLM------------EGRRKGKE 277
            + G+  +AR +FE+M  ++V+S+            NG +            EG    K 
Sbjct: 274 GKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKV 333

Query: 278 VHGYLIRS-----------------GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM-IG 319
               ++R+                 GL     +G   V+ +AK G +  +R VF  +   
Sbjct: 334 TFVTVLRACTTLAQCEKIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSS 393

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           ++ VSW  MI    Q G    A   F   +R     +  + ++ + SC     +   +QI
Sbjct: 394 RNVVSWTVMIWAYAQQGFIRAA---FDLYKRMDCEPNAVTFMAVMDSCLRPEDLPRAEQI 450

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           H   +  G +SDV +   L+++Y   G +     +F  + E   V+WNS++ AFA S   
Sbjct: 451 HAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFA-SNGC 509

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
              ++K Y  M   G  P+ +T++ +L A  S S      +       + +  +    NA
Sbjct: 510 YERSLKLYERMLLEGTKPDKITYLAVLDACQSVS------EARRYAATFELELDIAARNA 563

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
            +S Y +CG + + +  F  +  + + V+WN+MISG   +    +A+   W M   G R 
Sbjct: 564 AVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRA 623

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLE--FDVVIGSALVDMYSKCGRIDYASR 617
           +  T+   L AC+S+  L RG ++HA   R  LE   +  + +A+++MY KCG +D A  
Sbjct: 624 NSVTYLASLEACSSLKDLTRGRQLHA---RILLENIHEANLSNAVINMYGKCGSLDEAMD 680

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGL 677
            F  MP R+V SWN+MI+ YA+HG G +AL  F QM L+G  PD  T++G + AC     
Sbjct: 681 EFVKMPERDVISWNTMIATYAQHGSGRQALEFFKQMDLEGWTPDRATYLGAIDACGSVPS 740

Query: 678 VDEGFKHFKSMSQVYGLIPQLEQ----FSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
           +  G K   S+  V    P LEQ     + +V +  R G L   +    +   + N + W
Sbjct: 741 LALG-KTIHSI--VATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSH-SRNLVTW 796

Query: 734 RTVLGACCRANCRKTELGRKAANMLFEMEPQ 764
             ++ AC + + R+ E    A ++  EM+ Q
Sbjct: 797 SNLIAACAQ-HGRENE----ALDLFREMQLQ 822



 Score =  263 bits (672), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 197/703 (28%), Positives = 337/703 (47%), Gaps = 82/703 (11%)

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
           RYA  S+L+ C E        G  VH  +L S    +  + N LI MY  C    D A  
Sbjct: 28  RYA--SLLQKCAE--QKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQD-AVE 82

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           +FE +   ++ SW ++I+ Y++ G    V   F +MQ +G     KP+ + F +++TA  
Sbjct: 83  VFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDG----TKPDAFVFSTVLTACS 138

Query: 206 SS-VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS 264
           S+  L+    +   + +   AG+ + + VG+A+V+ + + G  + A+ +FE++ ++N+VS
Sbjct: 139 SAGALNEGKAIHDCVVL---AGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVS 194

Query: 265 MNGLMEGR------------------------------------------RKGKEVHGYL 282
            N L+                                              +GK  H  +
Sbjct: 195 WNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERI 254

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV---SWNTMISGLDQNGCYE 339
           IR+G    + VGN LVNMY KCG++D +R VF  M  +D +   SW  +I+    NG   
Sbjct: 255 IRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLL 314

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           EA + F  M  +G++ +  + ++ L +C +L      ++I      LGL+ D ++  A +
Sbjct: 315 EAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQC---EKIFARVKHLGLELDTTLGTAFV 371

Query: 400 SLYADAGYLSRCLKVF-FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           S +A  G L+    VF  L    + VSW  +I A+A  +  +  A   Y   +R    PN
Sbjct: 372 STFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQ-QGFIRAAFDLY---KRMDCEPN 427

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
            VTF+ ++ +           Q+HA ++     ++  ++  L++ YGKCG +D    IF 
Sbjct: 428 AVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFE 487

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
            + E R  V+WNSM+S +  N    +++ L   M+  G + D  T+  VL AC SV+   
Sbjct: 488 NLKE-RSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQSVSEAR 546

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGY 637
           R            LE D+   +A V  Y++CG +  A   FD +  + N  +WN+MISG 
Sbjct: 547 RYAATFE------LELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGL 600

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYGLIP 696
           A+HG   +AL  F +M+L+G   + VT++  L ACS    +  G + H + + +    I 
Sbjct: 601 AQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKDLTRGRQLHARILLEN---IH 657

Query: 697 QLEQFSCMVDLLGRAGELDK-IEEFINKMPITPNSLIWRTVLG 738
           +    + ++++ G+ G LD+ ++EF+ KMP   + + W T++ 
Sbjct: 658 EANLSNAVINMYGKCGSLDEAMDEFV-KMP-ERDVISWNTMIA 698



 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 242/511 (47%), Gaps = 37/511 (7%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK VH +++ SG      + N L+ MYAKCG + D+  VF  +   +  SW  +I+   +
Sbjct: 45  GKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAVEVFELLPCPNVFSWTALITAYAK 104

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G   E +  F  M+ DG     F   + L++C+S G +  G+ IH   +  G+++ V V
Sbjct: 105 EGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCVVLAGMETQV-V 163

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            NA+++LY   G +     VF  +PE + VSWN++I A A +     +A++ +  M   G
Sbjct: 164 GNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQN-GHCKDAMQVFQLMDLDG 222

Query: 455 -WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
              PN  TF++++ A S+      G   H ++I+    +   + N+L++ YGKCG +D  
Sbjct: 223 SVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHA 282

Query: 514 EKIFARMSERR--DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
             +F +M  R      SW  +I+ + HN  L +A  L + M   G   +  TF TVL AC
Sbjct: 283 RLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRAC 342

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD-LMPVRNVYSW 630
            ++A  E+   + A      LE D  +G+A V  ++K G +  A   F+ L   RNV SW
Sbjct: 343 TTLAQCEK---IFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSW 399

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC-----------SHAGLVD 679
             MI  YA+ G    A  L+ +M  +   P+ VTF+ V+ +C            HA +V 
Sbjct: 400 TVMIWAYAQQGFIRAAFDLYKRMDCE---PNAVTFMAVMDSCLRPEDLPRAEQIHAHMVA 456

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
            GF+          ++ Q+    C+V + G+ G +D        +    + + W ++L A
Sbjct: 457 SGFES--------DVVLQV----CLVTMYGKCGSVDSAWSIFENLK-ERSVVAWNSMLSA 503

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
                C +  L +    ML E    + + Y+
Sbjct: 504 FASNGCYERSL-KLYERMLLEGTKPDKITYL 533



 Score =  179 bits (453), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 192/382 (50%), Gaps = 11/382 (2%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S L  CA       G+ +H   L  G   +  + N L+ +YA  G L   ++VF L+P  
Sbjct: 31  SLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAVEVFELLPCP 90

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           +  SW ++I A+A  E  + E + ++  M+  G  P+   F  +L A SS      G  +
Sbjct: 91  NVFSWTALITAYA-KEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAI 149

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H  V+   +  +  + NA+++ YGKCG + + + +F R+ E R+ VSWN++I+    N  
Sbjct: 150 HDCVVLAGMETQ-VVGNAIVNLYGKCGRVHEAKAVFERLPE-RNLVSWNALIAANAQNGH 207

Query: 542 LPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
              AM +   M   G  R +  TF +V+ AC+++  L RG   H   +R   +  + +G+
Sbjct: 208 CKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGN 267

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRN---VYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           +LV+MY KCG +D+A   F+ M +R+   VYSW  +I+ +A +GH  +A  LF +M L+G
Sbjct: 268 SLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEG 327

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
            LP+ VTFV VL AC+     ++ F   K +    GL       +  V    + G+L   
Sbjct: 328 VLPNKVTFVTVLRACTTLAQCEKIFARVKHL----GLELDTTLGTAFVSTFAKLGDLAAA 383

Query: 718 EEFINKMPITPNSLIWRTVLGA 739
            +    +  + N + W  ++ A
Sbjct: 384 RDVFENLGSSRNVVSWTVMIWA 405



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/422 (22%), Positives = 184/422 (43%), Gaps = 70/422 (16%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H  ++  GF  DV L   L+ +Y + G + SA  +F+ + +R+ V+W  ++S +  
Sbjct: 447 AEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFAS 506

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPS---GFKFGMQVHCLVLKSNQT 120
            G    + K+++ M+  G   ++    +VL ACQ    +      F +++          
Sbjct: 507 NGCYERSLKLYERMLLEGTKPDKITYLAVLDACQSVSEARRYAATFELEL---------- 556

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETR-DLISWNSIISVYSQRGDTISVFKLFS 179
            D    N  ++ Y  C  S   A+  F+ I+ + + ++WN++IS  +Q G++    + F 
Sbjct: 557 -DIAARNAAVSAYARC-GSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECFW 614

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           +M+ EG R     N  T+ + + A  S   +  G  L  +IL        LS+     A+
Sbjct: 615 KMELEGVR----ANSVTYLASLEACSSLKDLTRGRQLHARILLENIHEANLSN-----AV 665

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLM-------EGRRK---------------- 274
           ++ + + G+   A   F +M +++V+S N ++        GR+                 
Sbjct: 666 INMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYAQHGSGRQALEFFKQMDLEGWTPDR 725

Query: 275 ------------------GKEVHGYLIRSG--LFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                             GK +H  +  +   L     V   LV MYA+CG++ D++SVF
Sbjct: 726 ATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVF 785

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
                ++ V+W+ +I+   Q+G   EA+  F  M+  G      +  + +++C+  G + 
Sbjct: 786 WRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVK 845

Query: 375 LG 376
            G
Sbjct: 846 DG 847


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 247/670 (36%), Positives = 377/670 (56%), Gaps = 10/670 (1%)

Query: 269 MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
           ++   + K+ H  L+R GL     + N L+           +  VF      +   +NT+
Sbjct: 13  LKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTL 72

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG-WIMLGQQIHGEGLKLG 387
           I G+  N  + +A+  + +MR+ G    NF+    L +C  L  +  +G  +H   +K G
Sbjct: 73  IRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTG 132

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
            D DV V   L+ LY+  G+L+   KVF  +PE + VSW ++I  + +S     EA+  +
Sbjct: 133 FDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIES-GCFGEALGLF 191

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
             +   G  P+  T + IL A S       G  +   + +        +  +L+  Y KC
Sbjct: 192 RGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKC 251

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
           G M++  ++F  M E+ D V W+++I GY  N +  +A+++ + M +   R D +    V
Sbjct: 252 GSMEEARRVFDGMVEK-DVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGV 310

Query: 568 LSACASVATLERGMEVHACGVRACLEF--DVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
            SAC+ +  LE G    A G+    EF  + V+G+AL+D Y+KCG +  A   F  M  +
Sbjct: 311 FSACSRLGALELGN--WARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRK 368

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
           +   +N++ISG A  GH   A  +F QM   G  PD  TFVG+L  C+HAGLVD+G ++F
Sbjct: 369 DCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYF 428

Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANC 745
             MS V+ + P +E + CMVDL  RAG L + ++ I  MP+  NS++W  +LG  CR + 
Sbjct: 429 SGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGG-CRLH- 486

Query: 746 RKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSW 805
           + T+L       L E+EP N+ +YVLL+N+Y++  +W++  K R ++ +  ++K  GCSW
Sbjct: 487 KDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSW 546

Query: 806 VTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVS 865
           V +   VH F+ GD SHP    IYEKL+ L + +R+AGY P T+F LFD+E E KE  + 
Sbjct: 547 VEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLG 606

Query: 866 YHSEKIAVAFVL-TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFN 924
            HSEK+AVAF L +  +K  IR++KNLRVCGDCH A K +SK+ GREI++RD+NRFHHF 
Sbjct: 607 CHSEKLAVAFALISTGAKDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFT 666

Query: 925 DGKCSCGDYW 934
           +G CSC DYW
Sbjct: 667 EGSCSCRDYW 676



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 221/496 (44%), Gaps = 63/496 (12%)

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE--STDCARRI 146
           +GS L+ C   G        Q HCL+L+     D  + N+L+    S L   +T  A  +
Sbjct: 1   MGSELKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLINLLLR---SSLHFAATQYATVV 57

Query: 147 FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS 206
           F +    ++  +N++I              +++ M++ GF     P+ +TF   +  A +
Sbjct: 58  FAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGF----APDNFTF-PFVLKACT 112

Query: 207 SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS-- 264
            +    ++   + ++V K G   D++V + LV  +++ G    ARK+F+++ +KNVVS  
Sbjct: 113 RLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWT 172

Query: 265 ------------------MNGLME-GRRK--------------------GKEVHGYLIRS 285
                               GL+E G R                     G+ + GY+  S
Sbjct: 173 AIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRES 232

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
           G    V V   LV+MYAKCG+++++R VF  M+ KD V W+ +I G   NG  +EA+  F
Sbjct: 233 GSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVF 292

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN-----ALLS 400
             M+R+ +    ++++   S+C+ LG + LG    G      +D D  +SN     AL+ 
Sbjct: 293 FEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGL-----MDGDEFLSNPVLGTALID 347

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
            YA  G +++  +VF  M   D V +N+VI   A     V  A   +  M + G  P+G 
Sbjct: 348 FYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMC-GHVGAAFGVFGQMVKVGMQPDGN 406

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           TF+ +L   +   +   GH+  + +   ++V         ++    + G + + + +   
Sbjct: 407 TFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRS 466

Query: 520 MSERRDEVSWNSMISG 535
           M    + + W +++ G
Sbjct: 467 MPMEANSIVWGALLGG 482



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 114/474 (24%), Positives = 206/474 (43%), Gaps = 55/474 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  +L+ G   D +L N L+   +       A+ +F + P  N   +  ++ G   
Sbjct: 19  AKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVS 78

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                +A  ++  M + GF  + +    VL+AC    P  F  G+ +H LV+K+   +D 
Sbjct: 79  NDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRL-PHYFHVGLSLHSLVIKTGFDWDV 137

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V   L+ +Y      TD AR++F+EI  ++++SW +II  Y + G       LF  +  
Sbjct: 138 FVKTGLVCLYSKNGFLTD-ARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLE 196

Query: 184 EGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            G    L+P+ +T   ++ A      + SG +    I   ++++G + +++V ++LV  +
Sbjct: 197 MG----LRPDSFTLVRILYACSRVGDLASGRW----IDGYMRESGSVGNVFVATSLVDMY 248

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGK----------EVHGYLIRSGLFDMV 291
           A+ G+   AR++F+ M++K+VV  + L++G               E+    +R   + MV
Sbjct: 249 AKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMV 308

Query: 292 AV-------------------------------GNGLVNMYAKCGTIDDSRSVFRFMIGK 320
            V                               G  L++ YAKCG++  ++ VF+ M  K
Sbjct: 309 GVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRK 368

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-I 379
           D V +N +ISGL   G    A   F  M + G+     + +  L  C   G +  G +  
Sbjct: 369 DCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYF 428

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            G      +   +     ++ L A AG L     +   MP E + + W +++G 
Sbjct: 429 SGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGG 482


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/716 (35%), Positives = 409/716 (57%), Gaps = 20/716 (2%)

Query: 235 SALVSGFARLGNFYYARKIFEQM----IQKN------VVSMNGLMEGRRKGKEVHGYLIR 284
           +AL+  ++  G F+ A  ++  M    +  N      V+     +     G+ +H +   
Sbjct: 68  NALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAA 127

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
            GL   + V   L+++Y +C     + +VF  M  +D V+WN M++G   +G Y  AI +
Sbjct: 128 VGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAH 187

Query: 345 FCAMR-RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD---VSVSNALLS 400
              M+ R GL  +  +L+S L   A  G +  G  +H   L+  LD +   V +  ALL 
Sbjct: 188 LLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLD 247

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +YA   +L    +VF  M   ++V+W+++IG F   + + +EA   + DM   G      
Sbjct: 248 MYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM-TEAFNLFKDMLVEGMCFLSA 306

Query: 461 TFI-NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           T + + L   +S +  ++G Q+HA + K  +  + T  N+LLS Y K G +++   +F  
Sbjct: 307 TSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDE 366

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           ++ + D +S+ +++SGY+ N    +A  +   M     + D  T  +++ AC+ +A L+ 
Sbjct: 367 IAIK-DTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQH 425

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G   H   +   L  +  I ++L+DMY+KCGRID + + FD MP R++ SWN+MI+GY  
Sbjct: 426 GRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGI 485

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
           HG G +A TLF  MK  G  PD VTF+ +++ACSH+GLV EG   F +M+  YG++P++E
Sbjct: 486 HGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRME 545

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            + CMVDLL R G LD+  +FI  MP+  +  +W  +LGA CR + +  +LG++ + M+ 
Sbjct: 546 HYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGA-CRIH-KNIDLGKQVSRMIQ 603

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           ++ P+   N+VLL+N++++ G++++ A+ R   K    KK  GCSW+ +   +H FV GD
Sbjct: 604 KLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGD 663

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLT 878
           +SHP    IY +L  +   ++  GY   T F L DLE E KE  + YHSEK+A+AF VL+
Sbjct: 664 QSHPCSPDIYHELDNILIDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLS 723

Query: 879 RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            N    I + KNLRVCGDCH+A K+++ +  R I++RD+NRFHHF +G+CSCGD+W
Sbjct: 724 LNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 242/496 (48%), Gaps = 24/496 (4%)

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G +  +R VF  +   D+ ++N +I      G +  AI  + +M    +  + ++    L
Sbjct: 47  GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +C++L  +  G+ IH     +GL +D+ VS AL+ LY           VF  MP  D V
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMR-RAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           +WN+++  +A+   +   A+ + LDM+ R G  PN  T +++L   +       G  VHA
Sbjct: 167 AWNAMLAGYAN-HGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHA 225

Query: 484 QVIK-YNVANE--TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
             ++ Y   NE    I  ALL  Y KC  +    ++F  M+  R+EV+W+++I G++  +
Sbjct: 226 YCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTV-RNEVTWSALIGGFVLCD 284

Query: 541 LLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
            + +A NL   M+  G   L   + A+ L  CAS+A L  G ++HA   ++ +  D+  G
Sbjct: 285 RMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAG 344

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           ++L+ MY+K G I+ A+  FD + +++  S+ +++SGY ++G  ++A  +F +M+     
Sbjct: 345 NSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQ 404

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           PD  T V ++ ACSH   +  G     S+  + GL  +    + ++D+  + G +D   +
Sbjct: 405 PDIATMVSLIPACSHLAALQHGRCSHGSVI-IRGLALETSICNSLIDMYAKCGRIDLSRQ 463

Query: 720 FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM-----EPQNAVNYVLLA- 773
             +KMP   + + W T++     A      LG++A  +   M     EP +     L+A 
Sbjct: 464 VFDKMP-ARDIVSWNTMI-----AGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAA 517

Query: 774 ----NMYASGGKWEDV 785
                +   G  W D 
Sbjct: 518 CSHSGLVTEGKHWFDT 533



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 137/553 (24%), Positives = 249/553 (45%), Gaps = 61/553 (11%)

Query: 30  YVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYAL 89
           ++  G LA A ++FD +P  ++ ++  ++  Y+ +G  + A  +++ M+      N+Y  
Sbjct: 43  HIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTF 102

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
             VL+AC     +    G  +H          D  VS  LI +Y  C      A  +F +
Sbjct: 103 PFVLKACSAL--ADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAA-NVFAK 159

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSS 207
           +  RD+++WN++++ Y+  G           MQ  G    L+PN  T  SL+   A + +
Sbjct: 160 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRG---GLRPNASTLVSLLPLLAQHGA 216

Query: 208 VLSGS----YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
           +  G+    Y L+  L   ++  L     +G+AL+  +A+  +  YA ++F  M  +N V
Sbjct: 217 LFQGTSVHAYCLRAYLDQNEEQVL-----IGTALLDMYAKCKHLVYACRVFHGMTVRNEV 271

Query: 264 SMNGLMEG------------------------------------------RRKGKEVHGY 281
           + + L+ G                                           R G ++H  
Sbjct: 272 TWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHAL 331

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           L +SG+   +  GN L++MYAK G I+++  +F  +  KD++S+  ++SG  QNG  EEA
Sbjct: 332 LAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEA 391

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
            + F  M+   +     +++S + +C+ L  +  G+  HG  +  GL  + S+ N+L+ +
Sbjct: 392 FLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDM 451

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           YA  G +    +VF  MP  D VSWN++I  +     L  EA   +L M+  G+ P+ VT
Sbjct: 452 YAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYG-IHGLGKEATTLFLSMKNQGFEPDDVT 510

Query: 462 FINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           FI ++AA S   +   G H       KY +         ++    + G +D+  +    M
Sbjct: 511 FICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSM 570

Query: 521 SERRDEVSWNSMI 533
             + D   W +++
Sbjct: 571 PLKADVRVWGALL 583



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 128/514 (24%), Positives = 225/514 (43%), Gaps = 52/514 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H      G   D+F+   LI++Y+R      A+ +F +MP R+ V+W  +++GY + 
Sbjct: 119 RTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANH 178

Query: 65  GMSNEACKMFKEMV-RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           GM + A     +M  R G   N   L S+L    + G       +  +CL    +Q  + 
Sbjct: 179 GMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQ 238

Query: 124 -LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            L+   L+ MY  C +    A R+F  +  R+ ++W+++I  +         F LF  M 
Sbjct: 239 VLIGTALLDMYAKC-KHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDML 297

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            EG  + L          + A+ + +  G+    Q+ A++ K+G+ +DL  G++L+S +A
Sbjct: 298 VEGMCF-LSATSVASALRVCASLADLRMGT----QLHALLAKSGIHADLTAGNSLLSMYA 352

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------------ 272
           + G    A  +F+++  K+ +S   L+ G                               
Sbjct: 353 KAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVS 412

Query: 273 -----------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                      + G+  HG +I  GL    ++ N L++MYAKCG ID SR VF  M  +D
Sbjct: 413 LIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARD 472

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IH 380
            VSWNTMI+G   +G  +EA   F +M+  G    + + I  +++C+  G +  G+    
Sbjct: 473 IVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFD 532

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEAL 439
               K G+   +     ++ L A  G+L    +    MP + D   W +++GA    + +
Sbjct: 533 TMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNI 592

Query: 440 -VSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
            + + V   +       + N V   NI +AA  F
Sbjct: 593 DLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRF 626



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 147/320 (45%), Gaps = 28/320 (8%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  + K G   D+   N+L+++Y + G +  A+ LFDE+  ++++S+  ++SGY   G 
Sbjct: 328 LHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGK 387

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           + EA  +FK+M       +   + S++ AC     +  + G   H  V+      +  + 
Sbjct: 388 AEEAFLVFKKMQACNVQPDIATMVSLIPACSHL--AALQHGRCSHGSVIIRGLALETSIC 445

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI MY  C    D +R++F+++  RD++SWN++I+ Y   G       LF  M+ +GF
Sbjct: 446 NSLIDMYAKC-GRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGF 504

Query: 187 RYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
               +P++ TF  LI A   S  V  G +       M  K G+L  +     +V   AR 
Sbjct: 505 ----EPDDVTFICLIAACSHSGLVTEGKHWFD---TMTHKYGILPRMEHYICMVDLLARG 557

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------GKEVHGYLIRSGLFDMVAVGNG- 296
           G    A +  + M  K  V + G + G  +       GK+V   + + G       G G 
Sbjct: 558 GFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLG-----PEGTGN 612

Query: 297 ---LVNMYAKCGTIDDSRSV 313
              L N+++  G  D++  V
Sbjct: 613 FVLLSNIFSAAGRFDEAAEV 632


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/716 (35%), Positives = 402/716 (56%), Gaps = 21/716 (2%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNV----VSMNGLM---EGRRK----GKEVHGYLI 283
           ++L+S F   G+F  A  +F +M+   V    ++   ++    GR +    GK VH +++
Sbjct: 85  TSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDEGKRVHSHIM 144

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
           ++G      V N +V MY KCG ++ + +VF  +   +  SW  +I+   QNG   E + 
Sbjct: 145 QTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLR 204

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSLY 402
               M + G+    ++  + L +C ++G +   + +H   +   GLD D +V  AL++LY
Sbjct: 205 LLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLY 264

Query: 403 ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
              G L     VF  +   D VSW+S+I AFA S      A++  + M   G  PN VTF
Sbjct: 265 GKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQS-GQAKSAIQLLMLMDLEGVRPNNVTF 323

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
           +N+L A +S    + G ++HA++++   +++  + +AL+  Y   G ++    IF   S 
Sbjct: 324 VNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIF-ESSR 382

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
            RD VSW+SMI+GY  NE   +A++L   M   G + +  TF + + ACA V  L RG +
Sbjct: 383 ERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQ 442

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
           +H       L+ DV + +ALV++Y KCGR++ A   F  M  +N+ +W S+   Y ++GH
Sbjct: 443 LHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGH 502

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
           G ++L L   M+L G  PD + FV +L +C++AG + +G  ++  M+Q +G+ P +E   
Sbjct: 503 GSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCG 562

Query: 703 CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
           CMVD+LGRAG+L+  E+ IN M    +SL W  +L AC   N   T    +AA  +F++E
Sbjct: 563 CMVDILGRAGKLEAAEQLINTMKF-ESSLAWMMLLTACKAHN--DTARAARAAEKIFQLE 619

Query: 763 PQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESH 822
           P+NA  YVLL++++ + G WE   + R+ M    V++  G S + + D VH FVA  +  
Sbjct: 620 PKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVHEFVAASDVL 679

Query: 823 PEKDL--IYEKLKELNQKMRDAGYVPQ-TKFALFDLEPESKEDLVSYHSEKIAVAF-VLT 878
           P   +  I+  L++L ++M+ AGYVP  T   L D+E   KE+ V YHSE +A+   +++
Sbjct: 680 PHHLVGEIFAALEKLGREMQGAGYVPDATAVRLRDVEEGGKENAVPYHSEMLALGLGIIS 739

Query: 879 RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             +  P+RI KNLR+C DCH A KF+SK+V R I +RD  R HHF +G CSCGDYW
Sbjct: 740 TPAGTPLRITKNLRMCSDCHIATKFVSKLVHRRISVRDGRRHHHFENGVCSCGDYW 795



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 148/543 (27%), Positives = 262/543 (48%), Gaps = 52/543 (9%)

Query: 21  FLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRA 80
            L N +I +Y+R G    A  +FD M D+N V+W  ++S +T  G   +A  +F++M+ +
Sbjct: 51  LLENIVIQMYLRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLS 110

Query: 81  GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST 140
           G   +R    S+L             G +VH  ++++    D +V N+++ MYG C +  
Sbjct: 111 GVSPDRITFTSILLKWSG-RERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGD-V 168

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
           + A  +F+ I+  ++ SW  II+ Y+Q G  + V +L SRM + G    +KP+ YTF ++
Sbjct: 169 EQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAG----VKPDGYTFTTV 224

Query: 201 ITAAYS-SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           + A  +   L  + +L    A +   GL  D  VG+AL++ + + G    A  +F Q+  
Sbjct: 225 LGACTAVGALEEAKILHA--ATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDN 282

Query: 260 KNVVSMNGL---------------------MEGRRK--------------------GKEV 278
           K++VS + +                     +EG R                     GKE+
Sbjct: 283 KDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEI 342

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H  ++++G  D V + + LV MY   G ++ +RS+F     +D VSW++MI+G  QN   
Sbjct: 343 HARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESP 402

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
             A+  F  M  DG+  ++ + +S + +CA +G +  G Q+H     LGLD DV V+ AL
Sbjct: 403 ARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATAL 462

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           ++LY   G L     VF  M + + ++W S+  A+  +    S ++K    M   G  P+
Sbjct: 463 VNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQN-GHGSRSLKLLHGMELQGMKPD 521

Query: 459 GVTFINILAAAS-SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           G+ F+ IL + + +  M K  H  +     + +A        ++   G+ G+++  E++ 
Sbjct: 522 GIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLI 581

Query: 518 ARM 520
             M
Sbjct: 582 NTM 584



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 242/475 (50%), Gaps = 21/475 (4%)

Query: 274 KGKEVHGYLIRSGLF-----DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
           +GK VHG ++R  L      D   + N ++ MY +CG  D +  VF  M  ++ V+W ++
Sbjct: 28  EGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDRMKDQNVVAWTSL 87

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW------IMLGQQIHGE 382
           IS     G + +A++ F  M   G+     +  S L     L W      +  G+++H  
Sbjct: 88  ISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSIL-----LKWSGRERNLDEGKRVHSH 142

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            ++ G + D  V N ++ +Y   G + +   VF  + + +  SW  +I A+A +   + E
Sbjct: 143 IMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCM-E 201

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN-VANETTIENALL 501
            ++    M +AG  P+G TF  +L A ++    +    +HA  I    +  +  +  AL+
Sbjct: 202 VLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALI 261

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
           + YGKCG +++   +F ++ + +D VSW+SMI+ +  +     A+ L+  M   G R ++
Sbjct: 262 NLYGKCGALEEAFGVFVQI-DNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNN 320

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
            TF  VL A  S+   + G E+HA  V+A    DV + SALV MY   G ++ A   F+ 
Sbjct: 321 VTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFES 380

Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
              R+V SW+SMI+GY+++    +AL+LF +M++DG  P+ VTFV  + AC+  G +  G
Sbjct: 381 SRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRG 440

Query: 682 FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
            +  + + +  GL   +   + +V+L G+ G L++ E     M    N L W ++
Sbjct: 441 TQLHERV-RCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMK-KKNLLTWTSI 493



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 176/343 (51%), Gaps = 16/343 (4%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVS-----VSNALLSLYADAGYLSRCLKVFF 416
           + L++C+ L  +  G+++HG  ++  L  D       + N ++ +Y   G     L VF 
Sbjct: 15  AILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFD 74

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG- 475
            M + + V+W S+I AF  +     +A+  +  M  +G SP+ +TF +IL   S      
Sbjct: 75  RMKDQNVVAWTSLISAFTFAGHF-GDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNL 133

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             G +VH+ +++     +  + N ++  YGKCG+++    +F  + +  +  SW  +I+ 
Sbjct: 134 DEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQD-PNVFSWTIIIAA 192

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC-LEF 594
           Y  N    + + L+  M Q G + D +TF TVL AC +V  LE    +HA  + +  L+ 
Sbjct: 193 YAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDR 252

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           D  +G+AL+++Y KCG ++ A   F  +  +++ SW+SMI+ +A+ G    A+ L   M 
Sbjct: 253 DAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMD 312

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
           L+G  P++VTFV VL A +         K F+   +++  I Q
Sbjct: 313 LEGVRPNNVTFVNVLEAVT-------SLKAFQYGKEIHARIVQ 348



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 117/473 (24%), Positives = 203/473 (42%), Gaps = 52/473 (10%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H  I++ G+  D  + N ++ +Y + GD+  A  +FD + D N  SW  I++ Y 
Sbjct: 135 EGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYA 194

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-TF 121
             G   E  ++   M +AG   + Y   +VL AC   G    +    +H   + S     
Sbjct: 195 QNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVG--ALEEAKILHAATISSTGLDR 252

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V   LI +YG C  + + A  +F +I+ +D++SW+S+I+ ++Q G   S  +L   M
Sbjct: 253 DAAVGTALINLYGKC-GALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLM 311

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             EG R    PN  TF +++ A  S  L      ++I A + +AG   D+ + SALV  +
Sbjct: 312 DLEGVR----PNNVTFVNVLEAVTS--LKAFQYGKEIHARIVQAGYSDDVCLTSALVKMY 365

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------------------------- 272
              G    AR IFE   +++VVS + ++ G                              
Sbjct: 366 CNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFV 425

Query: 273 ------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                       R+G ++H  +   GL   V V   LVN+Y KCG ++++ +VF  M  K
Sbjct: 426 SAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKK 485

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           + ++W ++     QNG    ++     M   G+       ++ L SC   G +  G   +
Sbjct: 486 NLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYY 545

Query: 381 GEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
               +  G+   V     ++ +   AG L    ++   M     ++W  ++ A
Sbjct: 546 NLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAWMMLLTA 598



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 109/259 (42%), Gaps = 39/259 (15%)

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFD-----VVIGSALVDMYSKCGRIDYASRFF 619
           A +L+AC+ +  L  G  VH   +R  L  D      ++ + ++ MY +CG  D A   F
Sbjct: 14  AAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVF 73

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS------ 673
           D M  +NV +W S+IS +   GH   A+ LF +M L G  PD +TF  +L   S      
Sbjct: 74  DRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNL 133

Query: 674 ------HAGLVDEGFKH----FKSMSQVYGLIPQLEQFSCMVDLL--------------- 708
                 H+ ++  G++        + ++YG    +EQ   + D +               
Sbjct: 134 DEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAY 193

Query: 709 ---GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN 765
              G   E+ ++   +N+  + P+   + TVLGAC      +      AA +      ++
Sbjct: 194 AQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRD 253

Query: 766 AVNYVLLANMYASGGKWED 784
           A     L N+Y   G  E+
Sbjct: 254 AAVGTALINLYGKCGALEE 272


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/662 (35%), Positives = 384/662 (58%), Gaps = 8/662 (1%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           K++H  L+  GL     +   L++  +  G I  +R VF  +       WN +I G  +N
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
             +++A++ +  M+   +   +F+    L +C+ L  + +G+ +H +  +LG D+DV V 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 396 NALLSLYADAGYLSRCLKVF--FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           N L++LYA    L     VF    +PE   VSW +++ A+A +   + EA++ +  MR+ 
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM-EALEIFSQMRKM 216

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
              P+ V  +++L A +     K G  +HA V+K  +  E  +  +L + Y KCG++   
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
           + +F +M +  + + WN+MISGY  N    +A+++   M+ +  R D  +  + +SACA 
Sbjct: 277 KILFDKM-KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           V +LE+   ++    R+    DV I SAL+DM++KCG ++ A   FD    R+V  W++M
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I GY  HG   +A++L+  M+  G  P+ VTF+G+L AC+H+G+V EG+  F  M+  + 
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HK 454

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           + PQ + ++C++DLLGRAG LD+  E I  MP+ P   +W  +L AC +   R  ELG  
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH--RHVELGEY 512

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
           AA  LF ++P N  +YV L+N+YA+   W+ VA+ R  MKE  + K+ GCSWV ++  + 
Sbjct: 513 AAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLE 572

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
            F  GD+SHP  + I  +++ +  ++++ G+V     +L DL  E  E+ +  HSE+IA+
Sbjct: 573 AFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAI 632

Query: 874 AFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           A+ L    +  P+RI KNLR C +CH+A K ISK+V REIV+RD+NRFHHF DG CSCGD
Sbjct: 633 AYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGD 692

Query: 933 YW 934
           YW
Sbjct: 693 YW 694



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 213/470 (45%), Gaps = 49/470 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H ++L  G  +  FL   LI+     GD+  A ++FD++P      W  I+ GY+  
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
               +A  M+  M  A    + +    +L+AC   G S  + G  VH  V +     D  
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACS--GLSHLQMGRFVHAQVFRLGFDADVF 155

Query: 125 VSNVLIAMYGSCLESTDCARRIFE--EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
           V N LIA+Y  C      AR +FE   +  R ++SW +I+S Y+Q G+ +   ++FS+M+
Sbjct: 156 VQNGLIALYAKC-RRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214

Query: 183 REGFRYSLKPNEYTFGSLITA------------AYSSVLSGSY-----LLQQILAMVKKA 225
           +      +KP+     S++ A             ++SV+         LL  +  M  K 
Sbjct: 215 K----MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC 270

Query: 226 GLLS------------DLYVGSALVSGFARLGNFYYARKIFEQMIQKNV----------V 263
           G ++            +L + +A++SG+A+ G    A  +F +MI K+V          +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330

Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
           S    +    + + ++ Y+ RS   D V + + L++M+AKCG+++ +R VF   + +D V
Sbjct: 331 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
            W+ MI G   +G   EAI  + AM R G+  ++ + +  L +C   G +  G       
Sbjct: 391 VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM 450

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
               ++        ++ L   AG+L +  +V   MP    V+ W +++ A
Sbjct: 451 ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 19/309 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H  ++K G   +  L  +L  +Y + G +A+A  LFD+M   N + W  ++SGY
Sbjct: 239 KQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGY 298

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G + EA  MF EM+      +  ++ S + AC + G    +    ++  V +S+   
Sbjct: 299 AKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG--SLEQARSMYEYVGRSDYRD 356

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  +S+ LI M+  C  S + AR +F+    RD++ W+++I  Y   G       L+  M
Sbjct: 357 DVFISSALIDMFAKC-GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           +R G    + PN+ TF  L+ A   S  V  G +   ++     K       Y  + ++ 
Sbjct: 416 ERGG----VHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD--HKINPQQQHY--ACVID 467

Query: 240 GFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG- 296
              R G+   A ++ + M +Q  V     L+   +K + V  G      LF +     G 
Sbjct: 468 LLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGH 527

Query: 297 ---LVNMYA 302
              L N+YA
Sbjct: 528 YVQLSNLYA 536


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 257/729 (35%), Positives = 393/729 (53%), Gaps = 44/729 (6%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVG 294
           S +V GFA++G++      F ++I+           G R       ++IR+   D+  + 
Sbjct: 148 SVMVGGFAKVGDYINCFGTFRELIRC----------GARPDNYTLPFVIRA-CRDLKNLQ 196

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
             LV+MY KC  I+D+R +F  M  +D V+W  MI G  + G   E+++ F  MR +G++
Sbjct: 197 MALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV 256

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
               ++++ + +CA LG +   + I     +     DV +  A++ +YA  G +    ++
Sbjct: 257 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 316

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  M E + +SW+++I A+        +A+  +  M  +G  P+ +T  ++L A  +   
Sbjct: 317 FDRMEEKNVISWSAMIAAYG-YHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRN 375

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
                QVHAQ   + +     + N L+  Y     +DD   +F  M  R D VSW+ M+ 
Sbjct: 376 LTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVR-DSVSWSVMVG 434

Query: 535 GYIH----------------------NELLPKAMN----LVWF--MMQRGQRLDHFTFAT 566
           G+                        N  LP   N    LV F  M + G   D     T
Sbjct: 435 GFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVT 494

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           V+ ACA +  + +   +     R   + DV++G+A++DM++KCG ++ A   FD M  +N
Sbjct: 495 VVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKN 554

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
           V SW++MI+ Y  HG G KAL LF  M   G LP+ +T V +L ACSHAGLV+EG + F 
Sbjct: 555 VISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFS 614

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
            M + Y +   ++ ++C+VDLLGRAG LD+  + I  M +  +  +W   LGA CR + +
Sbjct: 615 LMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA-CRTH-K 672

Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
              L  KAA  L E++PQN  +Y+LL+N+YA+ G+WEDVAK R  M +  +KK  G +W+
Sbjct: 673 DVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWI 732

Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSY 866
            + +  H F  GD +HP    IYE LK L  K+   GYVP T F L D++ E K  ++  
Sbjct: 733 EVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYS 792

Query: 867 HSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFND 925
           HSEK+A+AF ++      PIRI+KNLRVCGDCH+  K +S I GR I++RD+NRFHHF +
Sbjct: 793 HSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKE 852

Query: 926 GKCSCGDYW 934
           G CSCGDYW
Sbjct: 853 GACSCGDYW 861



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 140/597 (23%), Positives = 268/597 (44%), Gaps = 103/597 (17%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q   HG   ++ + N LI  Y     L  A  LFD M  R+SVSW+ +V G+   G  
Sbjct: 101 HAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDY 160

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
                 F+E++R G   + Y L  V+RAC++                LK+ Q        
Sbjct: 161 INCFGTFRELIRCGARPDNYTLPFVIRACRD----------------LKNLQM------- 197

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY  C E  D AR +F++++ RDL++W  +I  Y++ G       LF +M+ EG  
Sbjct: 198 ALVDMYVKCREIED-ARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEG-- 254

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQIL-AMVKKAGLLSDLYVGSALVSGFARLGN 246
             + P++    +++T  ++    G+    +I+   +++     D+ +G+A++  +A+ G 
Sbjct: 255 --VVPDKV---AMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGC 309

Query: 247 FYYARKIFEQMIQKNVVSMNGLM-------EGRR-------------------------- 273
              AR+IF++M +KNV+S + ++       +GR+                          
Sbjct: 310 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYA 369

Query: 274 --------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                   + ++VH      G+   + V N LV+ Y+    +DD+  +F  M  +DSVSW
Sbjct: 370 CINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSW 429

Query: 326 NTMISGLDQNGCY----------------------------EEAIMNFCAMRRDGLMSSN 357
           + M+ G  + G Y                             E+++ F  MR +G++   
Sbjct: 430 SVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDK 489

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
            ++++ + +CA LG +   + I     +     DV +  A++ ++A  G +    ++F  
Sbjct: 490 VAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDR 549

Query: 418 MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
           M E + +SW+++I A+        +A+  +  M R+G  PN +T +++L A S   + + 
Sbjct: 550 MEEKNVISWSAMIAAYG-YHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEE 608

Query: 478 GHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           G +  + + + Y+V  +      ++   G+ G +D+  K+   M+  +DE  W + +
Sbjct: 609 GLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFL 665



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/527 (23%), Positives = 233/527 (44%), Gaps = 67/527 (12%)

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
            F++ +++  +     +V+   L + R    +VH      G+ + + V N L+  Y+   
Sbjct: 72  KFHFLQRLNPKFYISALVNCRNLTQVR----QVHAQASVHGMLENIVVANKLIYFYSYYR 127

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            +DD+  +F  M  +DSVSW+ M+ G  + G Y      F  + R G    N++L   + 
Sbjct: 128 ALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIR 187

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           +C  L                      ++  AL+ +Y     +     +F  M E D V+
Sbjct: 188 ACRDLK---------------------NLQMALVDMYVKCREIEDARFLFDKMQERDLVT 226

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           W  +IG +A+     +E++  +  MR  G  P+ V  + ++     F+  KLG    A++
Sbjct: 227 WTVMIGGYAEC-GKANESLVLFEKMREEGVVPDKVAMVTVV-----FACAKLGAMHKARI 280

Query: 486 IKYNVAN-----ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           I   +       +  +  A++  Y KCG ++   +IF RM E ++ +SW++MI+ Y ++ 
Sbjct: 281 IDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEE-KNVISWSAMIAAYGYHG 339

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
              KA++L   M+  G   D  T A++L AC +   L +  +VHA      +  ++++ +
Sbjct: 340 QGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVAN 399

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH-------------------- 640
            LV  YS    +D A   FD M VR+  SW+ M+ G+A+                     
Sbjct: 400 KLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARP 459

Query: 641 --------GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
                   G+ +++L LF +M+ +G +PD V  V V+ AC+  G + +  +      Q  
Sbjct: 460 DNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKA-RTIDDYIQRK 518

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
                +   + M+D+  + G ++   E  ++M    N + W  ++ A
Sbjct: 519 KFQLDVILGTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAA 564



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 203/438 (46%), Gaps = 57/438 (13%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A++    I +  F  DV L   +I++Y + G + SA ++FD M ++N +SW+ +++ Y +
Sbjct: 278 ARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGY 337

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   +A  +F+ M+ +G L ++  L S+L AC  C         QVH          + 
Sbjct: 338 HGQGRKALDLFRMMLSSGMLPDKITLASLLYACINC--RNLTQVRQVHAQASVHGMLQNL 395

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +V+N L+  Y S   + D A  +F+ +  RD +SW+ ++  +++ GD ++ F  F    R
Sbjct: 396 IVANKLVHFY-SYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTF----R 450

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           E  R   +P+ YT      A  S VL            +++ G++ D      +V   A+
Sbjct: 451 ELIRCGARPDNYTLPFCGNANESLVL---------FDKMREEGVVPDKVAMVTVVFACAK 501

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
           LG  + AR I +  IQ+    ++ ++                        G  +++M+AK
Sbjct: 502 LGAMHKARTI-DDYIQRKKFQLDVIL------------------------GTAMIDMHAK 536

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           CG ++ +R +F  M  K+ +SW+ MI+    +G   +A+  F  M R G++ +  +L+S 
Sbjct: 537 CGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSL 596

Query: 364 LSSCASLGWIMLGQQIHGEGLKL--------GLDSDVSVSNALLSLYADAGYLSRCLKVF 415
           L +C+  G +        EGL+          + +DV     ++ L   AG L   LK+ 
Sbjct: 597 LYACSHAGLV-------EEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLI 649

Query: 416 FLMP-EHDQVSWNSVIGA 432
             M  E D+  W + +GA
Sbjct: 650 ESMTVEKDEGLWGAFLGA 667


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 250/649 (38%), Positives = 381/649 (58%), Gaps = 19/649 (2%)

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           V + L  +Y     +D +R VF  +   D+V WNT+++GL  +    EA+ +F  M  DG
Sbjct: 151 VASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGS----EAVESFARMVCDG 206

Query: 353 LMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL--S 409
            +  +  +L S L + A +  + +G+ +H    K GL     V   L+SLY+  G +  +
Sbjct: 207 SVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESA 266

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
           RCL  F +M + D V++N++I  ++    +V  +V  + ++   G  PN  T + ++   
Sbjct: 267 RCL--FDMMEKPDLVAYNALISGYS-VNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVH 323

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
           S F    L   +H  V+K      + +  A+ + + +  +M+   K F  M E+  E SW
Sbjct: 324 SPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTME-SW 382

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
           N+MISGY  N L   A+ L   M++   R +  T ++ LSACA +  L  G  +H     
Sbjct: 383 NAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITE 442

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
             LE +V + +AL+DMY+KCG I  A R F+ M  +NV SWN+MI+GY  HG G +AL L
Sbjct: 443 EDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKL 502

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           +  M     LP   TF+ VL ACSH GLV+EG+K F+SM+  Y + P +E  +CMVDLLG
Sbjct: 503 YKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLG 562

Query: 710 RAGELDKIEEFINKMP---ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           RAG+L +  E I++ P   + P   +W  +LGAC     + ++L + A+  LFE++P+N+
Sbjct: 563 RAGQLKEAFELISEFPKSAVGPG--VWGALLGACMVH--KDSDLAKLASQKLFELDPENS 618

Query: 767 VNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKD 826
             YVLL+N++ S  ++ + A  R+  K  ++ K  G + + + +  HVF+AGD +HP+ +
Sbjct: 619 GYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSE 678

Query: 827 LIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPI 885
            IY  L++L  KM +AGY P+T+ AL+D+E E KE +V  HSEK+A+AF +L+      I
Sbjct: 679 AIYSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEI 738

Query: 886 RIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           RI+KNLRVC DCH+A KFISK+  R IV+RD++RFHHF DG CSCGDYW
Sbjct: 739 RIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 116/466 (24%), Positives = 200/466 (42%), Gaps = 59/466 (12%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------------- 272
           D +V SAL   +  L    +ARK+F+ +   + V  N L+ G                  
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEAVESFARMVCDGS 207

Query: 273 ---------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
                                  G+ VH +  + GL +   V  GL+++Y+KCG ++ +R
Sbjct: 208 VRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESAR 267

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
            +F  M   D V++N +ISG   NG    ++  F  +   GL  ++ +L++ +   +  G
Sbjct: 268 CLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFG 327

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
             +L Q +HG  LK G  ++  VS A+ +L+     +    K F  MPE    SWN++I 
Sbjct: 328 HDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMIS 387

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA 491
            +A +  L   AV  +  M +    PN +T  + L+A +      LG  +H  + + ++ 
Sbjct: 388 GYAQN-GLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLE 446

Query: 492 NETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWF 551
               +  AL+  Y KCG + +  +IF  M + ++ VSWN+MI+GY  +    +A+ L   
Sbjct: 447 PNVYVMTALIDMYAKCGSISEARRIFNTM-DNKNVVSWNAMIAGYGLHGQGAEALKLYKD 505

Query: 552 MMQRGQRLDHFTFATVLSACASVATLERGMEVHAC---------GVRACLEFDVVIGSAL 602
           M+         TF +VL AC+    +E G +V            G+  C        + +
Sbjct: 506 MLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHC--------TCM 557

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYS--WNSMISGYARHGHGDKA 646
           VD+  + G++  A       P   V    W +++     H   D A
Sbjct: 558 VDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLA 603



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 198/459 (43%), Gaps = 58/459 (12%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D F+ + L  +Y  +  +  A K+FD +P  ++V W  +++G +     +EA + F  MV
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLS----GSEAVESFARMV 203

Query: 79  RAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
             G +  +   L SVL A  E   +    G  VH    K        V   LI++Y  C 
Sbjct: 204 CDGSVRPDATTLASVLPAAAEV--ADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCG 261

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
           +  + AR +F+ +E  DL+++N++IS YS  G   S   LF+ +   G    L PN  T 
Sbjct: 262 D-VESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLG----LWPNSSTL 316

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            +LI     S      L Q +   V K+G  ++  V +A+ +   RL +   ARK F+ M
Sbjct: 317 VALIPV--HSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTM 374

Query: 258 IQKNVVSMNGLMEGRRK-----------------------------------------GK 276
            +K + S N ++ G  +                                         GK
Sbjct: 375 PEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGK 434

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
            +H  +    L   V V   L++MYAKCG+I ++R +F  M  K+ VSWN MI+G   +G
Sbjct: 435 WLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHG 494

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI-HGEGLKLGLDSDVSVS 395
              EA+  +  M    L+ ++ + +S L +C+  G +  G ++         ++  +   
Sbjct: 495 QGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHC 554

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEH--DQVSWNSVIGA 432
             ++ L   AG L    ++    P+       W +++GA
Sbjct: 555 TCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGA 593



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 171/364 (46%), Gaps = 30/364 (8%)

Query: 13  KHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACK 72
           K G A    +   LI++Y + GD+ SA  LFD M   + V++  ++SGY+  GM   +  
Sbjct: 240 KCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVN 299

Query: 73  MFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQ-VHCLVLKSNQTFDGLVSNVLIA 131
           +F E++  G   N   L +++       P G     Q +H  VLKS  T +  VS  +  
Sbjct: 300 LFTELMTLGLWPNSSTLVALIPVHS---PFGHDLLAQCLHGFVLKSGFTANSPVSTAITT 356

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           ++   L   + AR+ F+ +  + + SWN++IS Y+Q G T     LF +M     + +++
Sbjct: 357 LHCR-LNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQM----VKLNVR 411

Query: 192 PNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
           PN  T  S ++A A    LS    L +I   + +  L  ++YV +AL+  +A+ G+   A
Sbjct: 412 PNPITISSTLSACAQLGALSLGKWLHRI---ITEEDLEPNVYVMTALIDMYAKCGSISEA 468

Query: 251 RKIFEQMIQKNVVSMNGLMEG---RRKGKE---VHGYLIRSGLFDMVAVGNGLVNMYAKC 304
           R+IF  M  KNVVS N ++ G     +G E   ++  ++ + L    A    ++   +  
Sbjct: 469 RRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHG 528

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G +++   VFR M    +++      G++   C  +       + R G +   F LIS  
Sbjct: 529 GLVEEGWKVFRSMTDDYAIN-----PGIEHCTCMVD------LLGRAGQLKEAFELISEF 577

Query: 365 SSCA 368
              A
Sbjct: 578 PKSA 581



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 7/200 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H  +LK GF  +  +   +  ++ R+ D+ SA K FD MP++   SW  ++SGY  
Sbjct: 332 AQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQ 391

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G++  A  +F++MV+     N   + S L AC + G      G  +H ++ + +   + 
Sbjct: 392 NGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLG--ALSLGKWLHRIITEEDLEPNV 449

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V   LI MY  C  S   ARRIF  ++ ++++SWN++I+ Y   G      KL+  M  
Sbjct: 450 YVMTALIDMYAKC-GSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDM-- 506

Query: 184 EGFRYSLKPNEYTFGSLITA 203
                 L P   TF S++ A
Sbjct: 507 --LDAHLLPTSATFLSVLYA 524



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 52/96 (54%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  I +     +V++   LI++Y + G ++ A ++F+ M ++N VSW  +++GY   
Sbjct: 434 KWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLH 493

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G   EA K++K+M+ A  L       SVL AC   G
Sbjct: 494 GQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGG 529



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%)

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           D  + SAL  +Y    R+D+A + FD +P  +   WN++++G +    G +A+  F++M 
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLS----GSEAVESFARMV 203

Query: 655 LDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGE 713
            DG + PD  T   VL A +    V  G +   S ++  GL       + ++ L  + G+
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMG-RCVHSFAEKCGLAEHEHVLTGLISLYSKCGD 262

Query: 714 LDKIEEFINKM 724
           ++      + M
Sbjct: 263 VESARCLFDMM 273


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 255/703 (36%), Positives = 398/703 (56%), Gaps = 44/703 (6%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT---IDDSRSVFRFMIGKDSVSWNTMI 329
           ++G ++H   I +GL   +   + L++ ++  G+   +D SR +F  +   +   WNTMI
Sbjct: 23  KQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMI 82

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMS-SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
            G  ++    EAI+ + +M   G+   +NF+    L+SCA L  +  G ++H   +K G 
Sbjct: 83  RGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGF 142

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           +SD+ V NAL+ LY+  G L+    +F      D VS+N++I  +A+     S A+  + 
Sbjct: 143 ESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPES-ALCLFG 201

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTIENALLSCYGK 506
           +M+ +G  P+  TF+ + +  S  +   +G Q+HAQV K   ++ +   +++A++  Y K
Sbjct: 202 EMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAK 261

Query: 507 CGEMDDCEKIFARMS-------------------------------ERRDEVSWNSMISG 535
           CG ++  E++F+ M                                  RD +SW +MISG
Sbjct: 262 CGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISG 321

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV-HACGVRACLEF 594
           Y       +A+ L   M   G + D  T   VLSACA +   + G  + H          
Sbjct: 322 YSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQ 381

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLM--PVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
           + ++ +A++DMY+KCG ID A   F  +   ++  + +NSMI+G A+HG G+ A+T+F +
Sbjct: 382 NTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRE 441

Query: 653 MKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG 712
           +   G  PD VTFVGVL AC H+GL++EG K F+SM   YG+ PQ+E + CMVDLLGR G
Sbjct: 442 LISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYG 501

Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLL 772
            L++  + + KMP   NS+IWR +L A CR +    ++G  A   L EME Q+   YVLL
Sbjct: 502 CLEEAYDLVQKMPFEANSVIWRALLSA-CRTH-GNVKIGEIAGQKLLEMEAQHGARYVLL 559

Query: 773 ANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKL 832
           +N+ A   +WE+  + RK M++  ++K  G S++ +   +H FVA D+SHP+   I   L
Sbjct: 560 SNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELML 619

Query: 833 KELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKL-PIRIMKNL 891
           K++  +++ AGYVP T   +FD++ E KE +VSYHSEK+A+AF L   S    IRI+KNL
Sbjct: 620 KDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNL 679

Query: 892 RVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           R+C DCH AFK +S+I GREI +RD+ RFHHF +G CSC D+W
Sbjct: 680 RICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/544 (24%), Positives = 251/544 (46%), Gaps = 48/544 (8%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGD---LASASKLFDEMPDRNSVSWACIV 58
           K     H Q + +G  + +F  + LI+ +  +G    L  +  LF ++   N   W  ++
Sbjct: 23  KQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMI 82

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLL-NRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
            GY+      EA  ++  M+  G    N +    +L +C     S  + G +VH  ++K 
Sbjct: 83  RGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARL--SSLEPGHEVHSHIIKH 140

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
               D  V N LI +Y S   + + AR +F+E   RDL+S+N++I  Y++     S   L
Sbjct: 141 GFESDLFVRNALIHLY-SVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCL 199

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK--AGLLSDLYVGS 235
           F  MQ  G    + P+E+TF +L +    SVL+   + +QI A V K    + S++ + S
Sbjct: 200 FGEMQNSG----ILPDEFTFVALFSVC--SVLNEPNVGKQIHAQVYKNLRSIDSNILLKS 253

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN 295
           A+V  +A+ G    A ++F  M                            G     A  +
Sbjct: 254 AIVDMYAKCGLINIAERVFSTM----------------------------GTSKSAAAWS 285

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMS 355
            +V  YA+CG I+ +R +F  M  +D +SW  MISG  Q G   EA+  F  M   G+  
Sbjct: 286 SMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKP 345

Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL-DSDVSVSNALLSLYADAGYLSRCLKV 414
              +L++ LS+CA LG   LG++++ + ++ G+ + +  ++ A++ +YA  G +   L++
Sbjct: 346 DEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEI 405

Query: 415 FFLMPEHDQVS--WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
           F  + ++ +    +NS+I   A    L   A+  + ++   G  P+ VTF+ +L A    
Sbjct: 406 FRRVGKNMKTGFVFNSMIAGLAQ-HGLGETAITVFRELISTGLKPDEVTFVGVLCACGHS 464

Query: 473 SMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
            + + G ++   +   Y +  +      ++   G+ G +++   +  +M    + V W +
Sbjct: 465 GLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRA 524

Query: 532 MISG 535
           ++S 
Sbjct: 525 LLSA 528



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 176/343 (51%), Gaps = 18/343 (5%)

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD--DCEKIFARMSE 522
           +L +  SF   K G Q+HAQ I   + ++    + L+S +   G  D  D  ++     +
Sbjct: 15  LLESCKSF---KQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQID 71

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG-QRLDHFTFATVLSACASVATLERGM 581
             +   WN+MI GY  ++   +A+ L   M+ +G    ++FTF  +L++CA +++LE G 
Sbjct: 72  CPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGH 131

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           EVH+  ++   E D+ + +AL+ +YS  G ++ A   FD   VR++ S+N+MI GYA   
Sbjct: 132 EVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVN 191

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
             + AL LF +M+  G LPD  TFV + S CS   +++E     +  +QVY  +  ++  
Sbjct: 192 QPESALCLFGEMQNSGILPDEFTFVALFSVCS---VLNEPNVGKQIHAQVYKNLRSIDSN 248

Query: 702 ----SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
               S +VD+  + G ++  E   + M  + ++  W +++  C  A C +  + RK  N 
Sbjct: 249 ILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMV--CGYARCGEINVARKLFN- 305

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKE 800
              M  ++ +++  + + Y+  G+  +  +  K M+   +K +
Sbjct: 306 --HMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPD 346



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 23/300 (7%)

Query: 30  YVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYAL 89
           Y R G++  A KLF+ M +R+ +SW  ++SGY+  G  +EA ++FKEM   G   +   L
Sbjct: 291 YARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTL 350

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTF--DGLVSNVLIAMYGSCLESTDCARRIF 147
            +VL AC   G   F  G +++   ++ N  F  + +++  ++ MY  C  S D A  IF
Sbjct: 351 VAVLSACARLG--AFDLGKRLYHQYIE-NGVFNQNTILTAAVMDMYAKC-GSIDSALEIF 406

Query: 148 EEI--ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF-GSLITAA 204
             +    +    +NS+I+  +Q G   +   +F    RE     LKP+E TF G L    
Sbjct: 407 RRVGKNMKTGFVFNSMIAGLAQHGLGETAITVF----RELISTGLKPDEVTFVGVLCACG 462

Query: 205 YSSVL-SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNV 262
           +S ++  G  L +   +M    G+   +     +V    R G    A  + ++M  + N 
Sbjct: 463 HSGLIEEGKKLFE---SMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANS 519

Query: 263 VSMNGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFRFM 317
           V    L+   R  G    G +    L +M A        L N+ A     +++R V + M
Sbjct: 520 VIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVM 579


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 295/895 (32%), Positives = 472/895 (52%), Gaps = 67/895 (7%)

Query: 84  LNRYALGSVLRACQEC-GPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC 142
           LN YA     R  QEC        G +VH  +  +    D  ++N+LI+MY  C  S + 
Sbjct: 51  LNFYA-----RRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKC-GSIED 104

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A  +F+ +E +D++SWN++IS Y+  G       LF +MQREG    LKPN+ +F S+++
Sbjct: 105 ANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREG----LKPNQNSFISILS 160

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
           A  + ++      +QI + + KAG  SD+ V +AL++ + + G+   ARK+F +M ++NV
Sbjct: 161 ACQTPIVL--EFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNV 218

Query: 263 VSMNGLMEGR-----------------------------------------RKGKEVHGY 281
           VS   ++ G                                           +G ++H Y
Sbjct: 219 VSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAY 278

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           + ++GL   V VGN L++MYA+CG++ ++R VF  +   + VSWN MI+G  + G  EEA
Sbjct: 279 IKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEA 337

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
              F  M++ G     F+  S L+ CA    +  G+++H + ++   ++DV+V+ AL+S+
Sbjct: 338 FRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISM 397

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           YA  G L    KVF  MPE + VSWN+ I A         EA + +  MRR    P+ VT
Sbjct: 398 YAKCGSLEEARKVFNQMPEKNAVSWNAFI-ACCCRHGSEKEAFQVFKQMRRDDVIPDHVT 456

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           FI +L + +S    + G  +H ++ ++ + +   + NAL+S YG+CG++ D  ++F R+ 
Sbjct: 457 FITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRI- 515

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
            RRD  SWN+MI+ Y+ +     A +L       G + D +TF  VL A A++  L+ G 
Sbjct: 516 RRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGR 575

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           ++H    +A LE D+ I + L+ MYSKCG +  A   F  +  ++V  WN+M++ Y    
Sbjct: 576 KIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSD 635

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
           HG  AL LF QM+L+G  PD  T+  VL+AC+  G ++ G K F +  +   +      +
Sbjct: 636 HGQDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHG-KKFHTQLKEAAMETDTRHY 694

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM 761
           +CMV  LGRA  L + EEFI ++    ++L+W ++L A CR +     L   A   L ++
Sbjct: 695 ACMVAALGRASLLKEAEEFIEEISSESDALMWESLLVA-CRIH-HNVGLAETAVEHLLDV 752

Query: 762 EPQNAVNYV-LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           + Q++      L N+YA+ G+WEDV+  +  M+EA +     C+ + +    H F+    
Sbjct: 753 KAQSSPAVCEQLMNIYAAAGRWEDVSVIKATMREAGLLAPKSCT-IEVNSEFHTFMTNHF 811

Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRN 880
           S P+   + +K++EL  KM D G++    +A  D     KE L S+  E +AVA+ L   
Sbjct: 812 S-PQIG-VEDKIEELVWKMMDKGFLLDPHYAPND--SREKERLFSHCPELLAVAYGLEHT 867

Query: 881 SK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
              + +R + +  V    H   KFISK   R I +RD N FH+F DG CSCGDYW
Sbjct: 868 PPGVLVRCVTDSPVTDPSHRMLKFISKAYNRGIFVRDPNCFHNFKDGICSCGDYW 922



 Score =  323 bits (828), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 201/637 (31%), Positives = 325/637 (51%), Gaps = 57/637 (8%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H  +    F  D++L N LI++Y + G +  A+ +F  M D++ VSW  ++SGY 
Sbjct: 69  EGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDVVSWNAMISGYA 128

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G   EA  +F +M R G   N+ +  S+L ACQ   P   +FG Q+H  + K+    D
Sbjct: 129 LHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQT--PIVLEFGEQIHSHITKAGYESD 186

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             VS  LI MY  C  S + AR++F E+  R+++SW ++IS Y Q GD+   F LF ++ 
Sbjct: 187 VNVSTALINMYCKC-GSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLI 245

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQIL---AMVKKAGLLSDLYVGSALVS 239
           R G     +PN+ +F S++ A      +    L+Q L   A +K+AGL  ++ VG+AL+S
Sbjct: 246 RSG----TQPNKVSFASILGAC-----TNPNDLEQGLKLHAYIKQAGLEQEVLVGNALIS 296

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR--------------------------- 272
            +AR G+   AR++F+ +   N VS N ++ G                            
Sbjct: 297 MYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGEGFMEEAFRLFRDMQQKGFQPDRFTY 356

Query: 273 -------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                         +GKE+H  ++R+     V V   L++MYAKCG+++++R VF  M  
Sbjct: 357 ASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPE 416

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           K++VSWN  I+   ++G  +EA   F  MRRD ++  + + I+ L+SC S      G+ I
Sbjct: 417 KNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYI 476

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           HG+  + G+ S+  V+NAL+S+Y   G L+   +VF+ +   D  SWN++I A+    A 
Sbjct: 477 HGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGAN 536

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
            S A   ++  +  G   +  TFIN+L A ++      G ++H  V K  +  +  I   
Sbjct: 537 GS-AFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTT 595

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  Y KCG + D   +F  + E +D V WN+M++ Y H++    A+ L   M   G   
Sbjct: 596 LIKMYSKCGSLRDAYSVFKNVQE-KDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNP 654

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
           D  T+ +VL+ACA +  +E G + H     A +E D 
Sbjct: 655 DSATYTSVLNACARLGAIEHGKKFHTQLKEAAMETDT 691



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 96/176 (54%), Gaps = 1/176 (0%)

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
           V  + +RG + +   +A  L  C    +L  G +VH     A  E D+ + + L+ MYSK
Sbjct: 39  VQLLGKRGVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSK 98

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
           CG I+ A+  F  M  ++V SWN+MISGYA HG G +A+ LF QM+ +G  P+  +F+ +
Sbjct: 99  CGSIEDANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISI 158

Query: 669 LSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           LSAC    +++ G +    +++  G    +   + ++++  + G L+   +  N+M
Sbjct: 159 LSACQTPIVLEFGEQIHSHITKA-GYESDVNVSTALINMYCKCGSLELARKVFNEM 213


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 285/886 (32%), Positives = 448/886 (50%), Gaps = 91/886 (10%)

Query: 8    HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
            H  ++K GF    +    LI +Y +   L  A  +FD   + + VSW  ++ GY   G+ 
Sbjct: 183  HCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLP 242

Query: 68   NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
             EA K+F+EM + G   ++ A  +V+ A  + G                           
Sbjct: 243  EEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLG--------------------------- 275

Query: 128  VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
                         D A  +F  +  R++++WN +IS +++ G  +   + F  M++ G  
Sbjct: 276  -----------RLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAG-- 322

Query: 188  YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
              +K    T GS+++A  S       LL    A+  K GL S++YVGS+LVS +A+ G  
Sbjct: 323  --IKSTRSTLGSVLSAIASLAALDFGLLVHAEAL--KQGLHSNVYVGSSLVSMYAKCGKM 378

Query: 248  YYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------------- 274
              A+K+F+ + ++NVV  N ++ G  +                                 
Sbjct: 379  EAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSAC 438

Query: 275  --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                    G ++H  +I++     + VGN LV+MYAK G ++D+R  F  +  +D+VSWN
Sbjct: 439  ACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWN 498

Query: 327  TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
             +I G  Q     EA   F  M   G++    SL S LS+CAS+  +  G+Q+H   +K 
Sbjct: 499  VIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKT 558

Query: 387  GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
            G ++ +   ++L+ +YA  G +    K+   MPE   VS N++I  +A  +  + +AV  
Sbjct: 559  GQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYA--QINLEQAVNL 616

Query: 447  YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA-NETTIENALLSCYG 505
            + DM   G +   +TF ++L A        LG Q+H+ ++K  +  ++  +  +LL  Y 
Sbjct: 617  FRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYM 676

Query: 506  KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
                  D   +F+  S  +  V W +MISG   N+    A+ L   M       D  TF 
Sbjct: 677  NSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFV 736

Query: 566  TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP-V 624
            + L ACA V++++ G E H+       + D +  SALVDMY+KCG +  + + F  M   
Sbjct: 737  SALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRK 796

Query: 625  RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
            ++V SWNSMI G+A++G+ + AL +F +MK     PD VTF+GVL+ACSH+G V EG   
Sbjct: 797  KDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLI 856

Query: 685  FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
            F  M  +YG+ P+ +  +CMVDLLGR G L + EEFINK+   P++ +W T+LGA CR +
Sbjct: 857  FDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGA-CRIH 915

Query: 745  CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
                  G++AA  L E+EPQN+  YVLL+N+YA+ G W++V   R+ M+E  VKK  GCS
Sbjct: 916  GDDIR-GQQAAEKLIELEPQNSSPYVLLSNIYAASGNWDEVNTLRREMREKGVKKLPGCS 974

Query: 805  WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKF 850
            W+ +    ++FVAGD+SH     I   LK+L   MR+  YV Q  F
Sbjct: 975  WIVVGQETNMFVAGDKSHHSASEIDAILKDLTPLMRENDYVVQLDF 1020



 Score =  296 bits (758), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 203/609 (33%), Positives = 327/609 (53%), Gaps = 25/609 (4%)

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
           +H   LK      G++ NV++ +Y  C +  D A R F+++E +D+++WNSI+S++S++G
Sbjct: 81  IHAQSLKLGFWSKGVLGNVIVDLYAKCAD-VDYAERAFKQLEDKDILAWNSILSMHSKQG 139

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGL 227
               V K F  +   G    + PNE+TF  +++  A    V  G    +Q+   V K G 
Sbjct: 140 FPHLVVKYFGLLWNSG----VWPNEFTFAIVLSSCARLEMVKCG----RQVHCNVVKMGF 191

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------GKEVHGY 281
            S  Y   AL+  +A+      AR IF+  ++ + VS   ++ G  K        +V   
Sbjct: 192 ESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQE 251

Query: 282 LIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
           + + G   D VA    ++N Y   G +D++  +F  M  ++ V+WN MISG  + G   E
Sbjct: 252 MEKVGQEPDQVAFVT-VINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVE 310

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           AI  F  MR+ G+ S+  +L S LS+ ASL  +  G  +H E LK GL S+V V ++L+S
Sbjct: 311 AIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVS 370

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +YA  G +    KVF  + E + V WN+++G +  +    +E ++ + +M+  G+ P+  
Sbjct: 371 MYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQN-GYANEVMELFFNMKSCGFYPDDF 429

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           T+ +IL+A +      LGHQ+H+ +IK   A+   + NAL+  Y K G ++D  + F  +
Sbjct: 430 TYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQF-EL 488

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
              RD VSWN +I GY+  E   +A +L   M   G   D  + A++LSACASV  LE+G
Sbjct: 489 IRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQG 548

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
            +VH   V+   E  +  GS+L+DMY+KCG ID A +    MP R+V S N++I+GYA+ 
Sbjct: 549 KQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQI 608

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
            + ++A+ LF  M ++G     +TF  +L AC     ++ G +   S+    GL  QL+ 
Sbjct: 609 -NLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLG-RQIHSLILKMGL--QLDD 664

Query: 701 FSCMVDLLG 709
               V LLG
Sbjct: 665 EFLGVSLLG 673



 Score =  282 bits (722), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 216/751 (28%), Positives = 355/751 (47%), Gaps = 33/751 (4%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S   K+ H Q LK GF     L N ++++Y +  D+  A + F ++ D++ ++W  I+S 
Sbjct: 75  STTNKIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSM 134

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           ++ +G  +   K F  +  +G   N +    VL +C        K G QVHC V+K    
Sbjct: 135 HSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARL--EMVKCGRQVHCNVVKMGFE 192

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
                   LI MY  C   TD AR IF+     D +SW S+I  Y + G      K+F  
Sbjct: 193 SISYCEGALIGMYAKCNFLTD-ARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQE 251

Query: 181 MQREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           M++ G     +P++  F ++I A      + + S L  ++           ++   + ++
Sbjct: 252 MEKVG----QEPDQVAFVTVINAYVDLGRLDNASDLFSRMPN--------RNVVAWNLMI 299

Query: 239 SGFARLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRRKGKEVHGYLIRSGLF 288
           SG A+ G    A + F+ M +           +V+S    +     G  VH   ++ GL 
Sbjct: 300 SGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLH 359

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
             V VG+ LV+MYAKCG ++ ++ VF  +  ++ V WN M+ G  QNG   E +  F  M
Sbjct: 360 SNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNM 419

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           +  G    +F+  S LS+CA L ++ LG Q+H   +K    S++ V NAL+ +YA +G L
Sbjct: 420 KSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGAL 479

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
               + F L+   D VSWN +I  +   E  V EA   +  M   G  P+ V+  +IL+A
Sbjct: 480 EDARQQFELIRNRDNVSWNVIIVGYVQEEDEV-EAFHLFRRMNLLGILPDEVSLASILSA 538

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
            +S    + G QVH   +K     +    ++L+  Y KCG +D   KI A M E R  VS
Sbjct: 539 CASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPE-RSVVS 597

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
            N++I+GY     L +A+NL   M+  G      TFA++L AC     L  G ++H+  +
Sbjct: 598 MNALIAGYAQIN-LEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLIL 656

Query: 589 RACLEF-DVVIGSALVDMYSKCGRIDYASRFF-DLMPVRNVYSWNSMISGYARHGHGDKA 646
           +  L+  D  +G +L+ MY    R   AS  F +    ++   W +MISG +++     A
Sbjct: 657 KMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVA 716

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           L L+ +M+    LPD  TFV  L AC+    + +G +    +    G        S +VD
Sbjct: 717 LQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHT-GFDSDELTSSALVD 775

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
           +  + G++    +   +M    + + W +++
Sbjct: 776 MYAKCGDVKSSMQVFKEMSRKKDVISWNSMI 806



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 157/578 (27%), Positives = 271/578 (46%), Gaps = 77/578 (13%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           K +H   ++ G +    +GN +V++YAKC  +D +   F+ +  KD ++WN+++S   + 
Sbjct: 79  KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G     +  F  +   G+  + F+    LSSCA L  +  G+Q+H   +K+G +S     
Sbjct: 139 GFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCE 198

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
            AL+ +YA   +L+    +F    E D+VSW S+IG +     L  EAVK + +M + G 
Sbjct: 199 GALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKV-GLPEEAVKVFQEMEKVGQ 257

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            P+ V F+ ++ A                                   Y   G +D+   
Sbjct: 258 EPDQVAFVTVINA-----------------------------------YVDLGRLDNASD 282

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F+RM   R+ V+WN MISG+       +A+     M + G +    T  +VLSA AS+A
Sbjct: 283 LFSRMP-NRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLA 341

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            L+ G+ VHA  ++  L  +V +GS+LV MY+KCG+++ A + FD +  +NV  WN+M+ 
Sbjct: 342 ALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLG 401

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-----------HAGLVDEGFKH 684
           GY ++G+ ++ + LF  MK  G  PD  T+  +LSAC+           H+ ++   F  
Sbjct: 402 GYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFAS 461

Query: 685 -----------------FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF-----IN 722
                             +   Q + LI   +  S  V ++G   E D++E F     +N
Sbjct: 462 NLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMN 521

Query: 723 KMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAV-NYVLLANMYASGGK 781
            + I P+ +   ++L AC  A+ R  E G++   +  +   +  + +   L +MYA  G 
Sbjct: 522 LLGILPDEVSLASILSAC--ASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGA 579

Query: 782 WEDVAKARKAMKEAEVKKE----AGCSWVTMKDGVHVF 815
            +   K    M E  V       AG + + ++  V++F
Sbjct: 580 IDSAHKILACMPERSVVSMNALIAGYAQINLEQAVNLF 617



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 137/277 (49%), Gaps = 15/277 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H   +K G    ++  ++LI++Y + G + SA K+   MP+R+ VS   +++GY
Sbjct: 546 EQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGY 605

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN-QT 120
               +  +A  +F++M+  G         S+L AC E        G Q+H L+LK   Q 
Sbjct: 606 AQINLE-QAVNLFRDMLVEGINSTEITFASLLDACHE--QQKLNLGRQIHSLILKMGLQL 662

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D  +   L+ MY + L +TD +    E    +  + W ++IS  SQ   ++   +L+  
Sbjct: 663 DDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKE 722

Query: 181 MQREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           M+      ++ P++ TF S +   A  SS+  G+    +  +++   G  SD    SALV
Sbjct: 723 MR----SCNVLPDQATFVSALRACAVVSSIKDGT----ETHSLIFHTGFDSDELTSSALV 774

Query: 239 SGFARLGNFYYARKIFEQMI-QKNVVSMNGLMEGRRK 274
             +A+ G+   + ++F++M  +K+V+S N ++ G  K
Sbjct: 775 DMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAK 811


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 274/730 (37%), Positives = 406/730 (55%), Gaps = 94/730 (12%)

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVF-RFMIG-KDSVSWNTMISGLDQNGCYEEAIMNFC 346
           D+VA    L+  ++  G  + +R +F    +G +D+V +N MI+G   N     AI  F 
Sbjct: 80  DIVA-RTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFR 138

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLG----QQIHGEGLKLGLDSDVSVSNALLSLY 402
            + R+G    NF+  S L    +L  I+      QQIH   +K G     SV NALLS++
Sbjct: 139 DLLRNGFRPDNFTFTSVL---GALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVF 195

Query: 403 ADAGY---------LSRCLKVFFLMPEHDQVSWNSVIGAFADS----------------- 436
                         ++   K+F  M E D++SW ++I  +  +                 
Sbjct: 196 VKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKL 255

Query: 437 ----EALVS---------EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
                A++S         EA++ +  M   G   +  T+ ++L+A ++      G QVHA
Sbjct: 256 VVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHA 315

Query: 484 QVIKY----NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
            +++     ++    ++ NAL + Y KCG++D+  ++F +M   +D VSWN+++SGY++ 
Sbjct: 316 YILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMP-VKDLVSWNAILSGYVNA 374

Query: 540 ----------ELLPKAMNLVWFMMQRGQRLDHF---------------------TFATVL 568
                     E +P+   L W +M  G   + F                      FA  +
Sbjct: 375 GRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAI 434

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
            ACA +A L  G ++HA  VR   +  +  G+AL+ MY+KCG ++ A   F  MP  +  
Sbjct: 435 IACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSV 494

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           SWN+MI+   +HGHG +AL LF  M  +  LPD +TF+ VLS CSHAGLV+EG ++FKSM
Sbjct: 495 SWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSM 554

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT 748
           S +YG+ P  + ++ M+DLL RAG+  + ++ I  MP+ P   IW  +L A CR +    
Sbjct: 555 SGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALL-AGCRIH-GNM 612

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
           +LG +AA  LFE+ PQ+   YVLL+NMYA+ G+W+DVAK RK M++  VKKE GCSW+ +
Sbjct: 613 DLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEV 672

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
           ++ VHVF+  D  HPE   +Y  L+EL  KMR  GY+P TKF L D+E E KE ++S HS
Sbjct: 673 ENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHS 732

Query: 869 EKIAVAFVLTRNSKLP----IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFN 924
           EK+AV F L    KLP    +R+ KNLR+CGDCH+AFKF+SK+V REIV+RD  RFHHF 
Sbjct: 733 EKLAVGFGLL---KLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFK 789

Query: 925 DGKCSCGDYW 934
           +G+CSCG+YW
Sbjct: 790 NGECSCGNYW 799



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 148/607 (24%), Positives = 269/607 (44%), Gaps = 110/607 (18%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEM--PD------------- 48
           A+  H  ++  GF    ++ N LI+VY +  DL SA  LFDE+  PD             
Sbjct: 34  ARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSS 93

Query: 49  ------------------RNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
                             R++V +  +++GY+H      A ++F++++R GF  + +   
Sbjct: 94  AGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFT 153

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD--------C 142
           SVL A         K   Q+HC V+KS   F   V N L++++  C  S           
Sbjct: 154 SVLGALALIVEDE-KQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAA 212

Query: 143 ARRIFEEIETRD-------------------------------LISWNSIISVYSQRGDT 171
           AR++F+E+  RD                               +++WN++IS Y   G  
Sbjct: 213 ARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFF 272

Query: 172 ISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLS 229
           +   ++F +M   G ++    +E+T+ S+++A  ++   L G  +   IL    +  L  
Sbjct: 273 LEALEMFRKMYLLGIQW----DEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDF 328

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFD 289
            L V +AL + + + G    AR++F QM  K++VS N ++ G                  
Sbjct: 329 SLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSG------------------ 370

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
                      Y   G ID+++S F  M  ++ ++W  MISGL QNG  EE++  F  M+
Sbjct: 371 -----------YVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMK 419

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
            +G    +++    + +CA L  +M G+Q+H + ++LG DS +S  NAL+++YA  G + 
Sbjct: 420 SEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVE 479

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
               +F  MP  D VSWN++I A        ++A++ +  M +    P+ +TF+ +L+  
Sbjct: 480 AAHCLFLTMPYLDSVSWNAMIAALG-QHGHGAQALELFELMLKEDILPDRITFLTVLSTC 538

Query: 470 SSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
           S   + + GH+    +   Y +         ++    + G+  + + +   M        
Sbjct: 539 SHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPI 598

Query: 529 WNSMISG 535
           W ++++G
Sbjct: 599 WEALLAG 605



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 143/322 (44%), Gaps = 24/322 (7%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           Q+       D+   N +++ YV  G +  A   F+EMP+RN ++W  ++SG    G   E
Sbjct: 351 QVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEE 410

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS--N 127
           + K+F  M   GF    YA    + AC     +    G Q+H  +++    FD  +S  N
Sbjct: 411 SLKLFNRMKSEGFEPCDYAFAGAIIACAWL--AALMHGRQLHAQLVRLG--FDSSLSAGN 466

Query: 128 VLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
            LI MY  C  +E+  C   +F  +   D +SWN++I+   Q G      +LF  M +E 
Sbjct: 467 ALITMYAKCGVVEAAHC---LFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKE- 522

Query: 186 FRYSLKPNEYTFGSLI-TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
               + P+  TF +++ T +++ ++   +   + ++ +       D Y  + ++    R 
Sbjct: 523 ---DILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHY--ARMIDLLCRA 577

Query: 245 GNFYYARKIFEQM-IQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG----LV 298
           G F  A+ + E M ++        L+ G R  G    G      LF+++   +G    L 
Sbjct: 578 GKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLS 637

Query: 299 NMYAKCGTIDDSRSVFRFMIGK 320
           NMYA  G  DD   V + M  K
Sbjct: 638 NMYATVGRWDDVAKVRKLMRDK 659


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 246/632 (38%), Positives = 367/632 (58%), Gaps = 26/632 (4%)

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF--SLISTLSSCASLGWIMLGQQIHGE 382
           W   I      G + +A+  F  MR      S+   SL + L SCA+LG   LG  +H  
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75

Query: 383 GLKLGLDSDVSVSNALLSLY--ADAGYLSRC-----------------LKVFFLMPEHDQ 423
            ++ G  +D   +NALL+LY      YL                     KVF  M E D 
Sbjct: 76  AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSWN+++   A+ E    EA+ +   M R G+ P+  T   +L   +  +  K G +VH 
Sbjct: 136 VSWNTLVLGCAE-EGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHG 194

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
              +    ++  + ++L+  Y  C   D   K+F  +  R D + WNS+++G   N  + 
Sbjct: 195 FAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR-DHILWNSLLAGCAQNGSVE 253

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +A+ +   M+Q G R    TF++++  C ++A+L  G ++HA  +    E +V I S+L+
Sbjct: 254 EALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLI 313

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           DMY KCG I  A   FD M   +V SW +MI GYA HG   +AL LF +M+L    P+H+
Sbjct: 314 DMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHI 373

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TF+ VL+ACSHAGLVD+G+K+FKSMS  YG++P LE F+ + D LGRAGELD+   FI+K
Sbjct: 374 TFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISK 433

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           M I P + +W T+L A CR + + T L  + A  + E+EP++  ++V+L+NMY++ G+W 
Sbjct: 434 MQIKPTASVWSTLLRA-CRVH-KNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWN 491

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
           + A  R++M++  +KK+  CSW+ +K  +HVFVA D SHP  D I + L   +++M   G
Sbjct: 492 EAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREG 551

Query: 844 YVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFK 902
           +VP T+    D+E E K  ++  HSEK+A+ F +++  +   IR+MKNLRVC DCH+  K
Sbjct: 552 HVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTK 611

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           FISK+  REIV+RD+NRFHHF DG CSCGD+W
Sbjct: 612 FISKLADREIVVRDANRFHHFKDGNCSCGDFW 643



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 187/392 (47%), Gaps = 33/392 (8%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAK--CGTIDDS-----------------RSVFR 315
           G  +H   IRSG F      N L+N+Y K  C  +D +                 R VF 
Sbjct: 69  GASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFD 128

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            MI +D VSWNT++ G  + G + EA+     M R+G    +F+L + L   A    +  
Sbjct: 129 EMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKR 188

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G ++HG   + G DSDV V ++L+ +YA+       +KVF  +P  D + WNS++   A 
Sbjct: 189 GLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQ 248

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           + + V EA+  +  M +AG  P  VTF +++    + +  + G Q+HA VI     +   
Sbjct: 249 NGS-VEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVF 307

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           I ++L+  Y KCGE+     IF +MS   D VSW +MI GY  +    +A+ L   M   
Sbjct: 308 ISSSLIDMYCKCGEISIAHCIFDKMSS-PDVVSWTAMIMGYALHGPAREALVLFERMELG 366

Query: 556 GQRLDHFTFATVLSACASVATLERG------MEVHACGVRACLEFDVVIGSALVDMYSKC 609
             + +H TF  VL+AC+    +++G      M  H  G+   LE      +AL D   + 
Sbjct: 367 NAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHY-GIVPTLEH----FAALADTLGRA 421

Query: 610 GRIDYASRFFDLMPVRNVYS-WNSMISGYARH 640
           G +D A  F   M ++   S W++++     H
Sbjct: 422 GELDEAYNFISKMQIKPTASVWSTLLRACRVH 453



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 109/438 (24%), Positives = 185/438 (42%), Gaps = 68/438 (15%)

Query: 158 WNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS-SVLSGSYLLQ 216
           W   I   +  G       LF RM     R S  P      SL  A  S + L  S L  
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRM-----RASAAPRSSVPASLPAALKSCAALGLSALGA 70

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLG-------------------NFYYARKIFEQM 257
            + A+  ++G  +D +  +AL++ + ++                     F   RK+F++M
Sbjct: 71  SLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEM 130

Query: 258 IQKNVVSMNGLM-----EGR------------------------------------RKGK 276
           I+++VVS N L+     EGR                                    ++G 
Sbjct: 131 IERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGL 190

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           EVHG+  R+G    V VG+ L++MYA C   D S  VF  +  +D + WN++++G  QNG
Sbjct: 191 EVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNG 250

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
             EEA+  F  M + G+     +  S +  C +L  +  G+Q+H   +  G + +V +S+
Sbjct: 251 SVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISS 310

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           +L+ +Y   G +S    +F  M   D VSW ++I  +A       EA+  +  M      
Sbjct: 311 SLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYA-LHGPAREALVLFERMELGNAK 369

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEK 515
           PN +TF+ +L A S   +   G +    +   Y +        AL    G+ GE+D+   
Sbjct: 370 PNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYN 429

Query: 516 IFARMSERRDEVSWNSMI 533
             ++M  +     W++++
Sbjct: 430 FISKMQIKPTASVWSTLL 447



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 148/315 (46%), Gaps = 32/315 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVG------------DLASAS-------KLFD 44
           A L  L I    FA D F  N L+N+Y +V             D+  +S       K+FD
Sbjct: 70  ASLHALAIRSGAFA-DRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFD 128

Query: 45  EMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGF 104
           EM +R+ VSW  +V G   +G  +EA    ++M R GF  + + L +VL    EC  +  
Sbjct: 129 EMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAEC--ADV 186

Query: 105 KFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISV 164
           K G++VH    ++    D  V + LI MY +C   TD + ++F+ +  RD I WNS+++ 
Sbjct: 187 KRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTR-TDYSVKVFDNLPVRDHILWNSLLAG 245

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
            +Q G       +F RM + G R    P   TF SLI    +  L+     +Q+ A V  
Sbjct: 246 CAQNGSVEEALGIFRRMLQAGVR----PVPVTFSSLIPVCGN--LASLRFGKQLHAYVIC 299

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIR 284
            G   ++++ S+L+  + + G    A  IF++M   +VVS   ++ G          L+ 
Sbjct: 300 GGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALV- 358

Query: 285 SGLFDMVAVGNGLVN 299
             LF+ + +GN   N
Sbjct: 359 --LFERMELGNAKPN 371



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/385 (24%), Positives = 161/385 (41%), Gaps = 71/385 (18%)

Query: 54  WACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFK-FGMQVHC 112
           WA  +     +G   +A  +F  M RA          S+  A + C   G    G  +H 
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRM-RASAAPRSSVPASLPAALKSCAALGLSALGASLHA 74

Query: 113 LVLKSNQTFDGLVSNVLIAMYG----SCLESTDCA--------------RRIFEEIETRD 154
           L ++S    D   +N L+ +Y     S L+ST  A              R++F+E+  RD
Sbjct: 75  LAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERD 134

Query: 155 LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL--ITAAYSSVLSGS 212
           ++SWN+++   ++ G          +M REGFR    P+ +T  ++  I A  + V  G 
Sbjct: 135 VVSWNTLVLGCAEEGRHHEALGFVRKMCREGFR----PDSFTLSTVLPIFAECADVKRG- 189

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG- 271
               ++     + G  SD++VGS+L+  +A      Y+ K+F+ +  ++ +  N L+ G 
Sbjct: 190 ---LEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGC 246

Query: 272 ----------------------------------------RRKGKEVHGYLIRSGLFDMV 291
                                                    R GK++H Y+I  G  D V
Sbjct: 247 AQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNV 306

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
            + + L++MY KCG I  +  +F  M   D VSW  MI G   +G   EA++ F  M   
Sbjct: 307 FISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELG 366

Query: 352 GLMSSNFSLISTLSSCASLGWIMLG 376
               ++ + ++ L++C+  G +  G
Sbjct: 367 NAKPNHITFLAVLTACSHAGLVDKG 391



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 122/255 (47%), Gaps = 10/255 (3%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
            ++GF  DVF+ ++LI++Y        + K+FD +P R+ + W  +++G    G   EA 
Sbjct: 197 FRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEAL 256

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
            +F+ M++AG         S++  C     +  +FG Q+H  V+      +  +S+ LI 
Sbjct: 257 GIFRRMLQAGVRPVPVTFSSLIPVCGNL--ASLRFGKQLHAYVICGGFEDNVFISSSLID 314

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY  C E    A  IF+++ + D++SW ++I  Y+  G       LF RM+      + K
Sbjct: 315 MYCKCGE-ISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELG----NAK 369

Query: 192 PNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
           PN  TF +++TA +++ ++   +  +   +M    G++  L   +AL     R G    A
Sbjct: 370 PNHITFLAVLTACSHAGLVDKGW--KYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEA 427

Query: 251 RKIFEQMIQKNVVSM 265
                +M  K   S+
Sbjct: 428 YNFISKMQIKPTASV 442



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  ++  GF  +VF+ ++LI++Y + G+++ A  +FD+M   + VSW  ++ GY   
Sbjct: 291 KQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALH 350

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKF--GMQVHCLVLKSNQT 120
           G + EA  +F+ M       N     +VL AC   G    G+K+   M  H  ++ + + 
Sbjct: 351 GPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEH 410

Query: 121 FDGLVSNV 128
           F  L   +
Sbjct: 411 FAALADTL 418


>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 241/581 (41%), Positives = 351/581 (60%), Gaps = 17/581 (2%)

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC------LKV 414
           I+ L SCAS  +    +QIH   ++ G    V ++N  +  Y     LS C       ++
Sbjct: 43  IALLLSCASSKFKF--RQIHAFSIRHG----VPLTNPDMGKYLIFTLLSFCSPMSYAHQI 96

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  +   +  +WN++I  +A+SE  +  A++ Y  M  +   P+  T+  +L A +    
Sbjct: 97  FSQIQNPNIFTWNTMIRGYAESENPMP-ALELYRQMHVSCIEPDTHTYPFLLKAIAKLMD 155

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            + G +VH+  I+    +   ++N L+  Y  CG  +   K+F  M+ER + V+WNS+I+
Sbjct: 156 VREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAER-NLVTWNSVIN 214

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           GY  N    +A+ L   M  RG   D FT  ++LSACA +  L  G   H   V+  L+ 
Sbjct: 215 GYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDG 274

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           ++  G+AL+D+Y+KCG I  A + FD M  ++V SW S+I G A +G G +AL LF +++
Sbjct: 275 NLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELE 334

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
             G +P  +TFVGVL ACSH G+VDEGF +FK M + YG++P++E + CMVDLLGRAG +
Sbjct: 335 RKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLV 394

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
            +  EFI  MP+ PN+++WRT+LGAC         LG  A   L ++EP+++ +YVLL+N
Sbjct: 395 KQAHEFIQNMPMQPNAVVWRTLLGACTIHG--HLALGEVARAQLLQLEPKHSGDYVLLSN 452

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           +YAS  +W DV K R+ M    VKK  G S V +++ +H FV GD SHP+ + IY KL E
Sbjct: 453 LYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAE 512

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRV 893
           + + ++  GYVP     L D+E E KE  +SYHSEKIA+AF+L   +  +PIR++KNLRV
Sbjct: 513 ITKLLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRV 572

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           C DCH A K ISK+  REIV+RD +RFHHF DG CSC DYW
Sbjct: 573 CADCHLAIKLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 183/381 (48%), Gaps = 18/381 (4%)

Query: 173 SVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLY 232
           S FK F ++     R+ +       G  +     S  S      QI + ++      +++
Sbjct: 52  SKFK-FRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNP----NIF 106

Query: 233 VGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLMEG------RRKGKEVHGYL 282
             + ++ G+A   N   A +++ QM    I+ +  +   L++        R+G++VH   
Sbjct: 107 TWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIA 166

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
           IR+G   +V V N LV+MYA CG  + +  +F  M  ++ V+WN++I+G   NG   EA+
Sbjct: 167 IRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEAL 226

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
             F  M   G+    F+++S LS+CA LG + LG++ H   +K+GLD ++   NALL LY
Sbjct: 227 TLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLY 286

Query: 403 ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
           A  G + +  KVF  M E   VSW S+I   A +     EA++ + ++ R G  P+ +TF
Sbjct: 287 AKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVN-GFGKEALELFKELERKGLMPSEITF 345

Query: 463 INILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           + +L A S   M   G     ++  +Y +  +      ++   G+ G +    +    M 
Sbjct: 346 VGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMP 405

Query: 522 ERRDEVSWNSMISG-YIHNEL 541
            + + V W +++    IH  L
Sbjct: 406 MQPNAVVWRTLLGACTIHGHL 426



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/395 (23%), Positives = 173/395 (43%), Gaps = 61/395 (15%)

Query: 87  YALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL-VSNVLIAMYGSCLESTDCARR 145
           Y L   +     C  S FKF  Q+H   ++         +   LI    S       A +
Sbjct: 37  YILKKCIALLLSCASSKFKF-RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQ 95

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           IF +I+  ++ +WN++I  Y++  + +   +L+ +M        ++P+ +T+  L+ A  
Sbjct: 96  IFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVS----CIEPDTHTYPFLLKAIA 151

Query: 206 S--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
               V  G    +++ ++  + G  S ++V + LV  +A  G+   A K+FE M ++N+V
Sbjct: 152 KLMDVREG----EKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLV 207

Query: 264 SMNGL-----MEGRRK------------------------------------GKEVHGYL 282
           + N +     + GR                                      G+  H Y+
Sbjct: 208 TWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYM 267

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
           ++ GL   +  GN L+++YAKCG+I  +  VF  M  K  VSW ++I GL  NG  +EA+
Sbjct: 268 VKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEAL 327

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG----QQIHGEGLKLGLDSDVSVSNAL 398
             F  + R GLM S  + +  L +C+  G +  G    +++  E    G+   +     +
Sbjct: 328 ELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEE---YGIVPKIEHYGCM 384

Query: 399 LSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           + L   AG + +  +    MP + + V W +++GA
Sbjct: 385 VDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGA 419



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 153/328 (46%), Gaps = 24/328 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H   +++GF   VF+ NTL+++Y   G   SA KLF+ M +RN V+W  +++GY
Sbjct: 157 REGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGY 216

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G  NEA  +F+EM   G   + + + S+L AC E G      G + H  ++K     
Sbjct: 217 ALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELG--ALALGRRAHVYMVKVGLDG 274

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +    N L+ +Y  C  S   A ++F+E+E + ++SW S+I   +  G      +LF  +
Sbjct: 275 NLHAGNALLDLYAKC-GSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKEL 333

Query: 182 QREGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           +R+G    L P+E TF G L   ++  ++   +       M ++ G++  +     +V  
Sbjct: 334 ERKG----LMPSEITFVGVLYACSHCGMVDEGF--DYFKRMKEEYGIVPKIEHYGCMVDL 387

Query: 241 FARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVHGYL-----IRSGLFDMVAVG 294
             R G    A +  + M +Q N V    L+        +HG+L      R+ L  +    
Sbjct: 388 LGRAGLVKQAHEFIQNMPMQPNAVVWRTLL----GACTIHGHLALGEVARAQLLQLEPKH 443

Query: 295 NG----LVNMYAKCGTIDDSRSVFRFMI 318
           +G    L N+YA      D   V R M+
Sbjct: 444 SGDYVLLSNLYASEQRWSDVHKVRRTML 471



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 182/395 (46%), Gaps = 34/395 (8%)

Query: 36  LASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRA 95
           ++ A ++F ++ + N  +W  ++ GY        A +++++M  +    + +    +L+A
Sbjct: 90  MSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKA 149

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDL 155
             +      + G +VH + +++       V N L+ MY +C  + + A ++FE +  R+L
Sbjct: 150 IAKL--MDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHA-ESAHKLFELMAERNL 206

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL 215
           ++WNS+I+ Y+  G       LF  M   G    ++P+ +T  SL++A   + L    L 
Sbjct: 207 VTWNSVINGYALNGRPNEALTLFREMGLRG----VEPDGFTMVSLLSAC--AELGALALG 260

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR--- 272
           ++    + K GL  +L+ G+AL+  +A+ G+   A K+F++M +K+VVS   L+ G    
Sbjct: 261 RRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVN 320

Query: 273 ---RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM-----IGKDSVS 324
              ++  E+   L R GL        G++   + CG +D+    F+ M     I      
Sbjct: 321 GFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEH 380

Query: 325 WNTMISGLDQNGCYEEA---IMNFCAMRRDGLMSSNFSLIST-LSSCASLGWIMLGQQIH 380
           +  M+  L + G  ++A   I N         M  N  +  T L +C   G + LG+   
Sbjct: 381 YGCMVDLLGRAGLVKQAHEFIQNMP-------MQPNAVVWRTLLGACTIHGHLALGEVAR 433

Query: 381 GEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLKV 414
            + L+  L+   S    LLS LYA     S   KV
Sbjct: 434 AQLLQ--LEPKHSGDYVLLSNLYASEQRWSDVHKV 466


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 250/646 (38%), Positives = 378/646 (58%), Gaps = 35/646 (5%)

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           + + SW   +    ++  + EAI  +  M   G    NF+  + L + + L  +  G+QI
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 380 HGEGLKLGL-DSDVSVSN--------------------ALLSLYADAGYLSRCLKVFFLM 418
           H   +K G   S V+V+N                    AL+++YA  G +     +F   
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESF 174

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
            + D VSWN++I +F+ S+   SEA+ ++  M   G   +GVT  ++L A S      +G
Sbjct: 175 VDRDMVSWNTMISSFSQSDRF-SEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVG 233

Query: 479 HQVHAQVIKYNVANETT-IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI 537
            ++HA V++ N   E + + +AL+  Y  C +++   ++F  +  RR E+ WN+MISGY 
Sbjct: 234 KEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIEL-WNAMISGYA 292

Query: 538 HNELLPKAMNLVWFMMQ-RGQRLDHFTFATVLSACA-SVATLERGMEVHACGVRACLEFD 595
            N L  KA+ L   M++  G   +  T A+V+ AC  S+A + +G E+HA  +R  L  D
Sbjct: 293 RNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASD 352

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
           + +GSALVDMY+KCG ++ + R F+ MP +NV +WN +I     HG G++AL LF  M  
Sbjct: 353 ITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVA 412

Query: 656 DG-----PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
           +        P+ VTF+ V +ACSH+GL+ EG   F  M   +G+ P  + ++C+VDLLGR
Sbjct: 413 EAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGR 472

Query: 711 AGELDKIEEFINKMPITPNSL-IWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
           AG+L++  E +N MP   + +  W ++LGAC R + +  ELG  AA  L  +EP  A +Y
Sbjct: 473 AGQLEEAYELVNTMPAEFDKVGAWSSLLGAC-RIH-QNVELGEVAAKNLLHLEPNVASHY 530

Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIY 829
           VLL+N+Y+S G W    + RK M++  VKKE GCSW+  +D VH F+AGD SHP+ + ++
Sbjct: 531 VLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLH 590

Query: 830 EKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIM 888
             L+ L++KMR  GYVP T   L +++ + KE+L+  HSEK+A+AF +L       IR+ 
Sbjct: 591 GFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVA 650

Query: 889 KNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           KNLRVC DCH+A KFISKI+ REI++RD  RFHHF +G CSCGDYW
Sbjct: 651 KNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 204/475 (42%), Gaps = 92/475 (19%)

Query: 36  LASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRA 95
           L S +      P R++ SW   +   T      EA   + EM  +G   + +A  +VL+A
Sbjct: 42  LTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKA 101

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGL-VSNVLIAMYGSC------------------ 136
               G    K G Q+H   +K       + V+N L+ MYG C                  
Sbjct: 102 VS--GLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYA 159

Query: 137 -LESTDCARRIFEEIETRDLISWNSIISVYSQR---------------------GDTI-S 173
            L   D ++ +FE    RD++SWN++IS +SQ                      G TI S
Sbjct: 160 KLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIAS 219

Query: 174 VFKLFSRMQR-----EGFRYSLKPNEYTFGSLITAAY-------SSVLSGSYLLQQILAM 221
           V    S ++R     E   Y L+ N+    S + +A          V SG  +   IL  
Sbjct: 220 VLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHIL-- 277

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ-----KNVVSMNGLMEG----- 271
               G   +L+  +A++SG+AR G    A  +F +MI+      N  +M  +M       
Sbjct: 278 ----GRRIELW--NAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSL 331

Query: 272 --RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
               KGKE+H Y IR+ L   + VG+ LV+MYAKCG ++ SR VF  M  K+ ++WN +I
Sbjct: 332 AAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLI 391

Query: 330 SGLDQNGCYEEAIMNFCAM----RRDGLMSSN-FSLISTLSSCASLGWIMLGQQI----- 379
                +G  EEA+  F  M     R G    N  + I+  ++C+  G I  G  +     
Sbjct: 392 MACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMK 451

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQV-SWNSVIGA 432
           H  G++   D    V    + L   AG L    ++   MP E D+V +W+S++GA
Sbjct: 452 HDHGVEPTSDHYACV----VDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGA 502



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 182/370 (49%), Gaps = 21/370 (5%)

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
           G+ D     N L+ MYAK G +DDS+++F   + +D VSWNTMIS   Q+  + EA+  F
Sbjct: 143 GIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFF 202

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG-LDSDVSVSNALLSLYAD 404
             M  +G+     ++ S L +C+ L  + +G++IH   L+   L  +  V +AL+ +Y +
Sbjct: 203 RLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCN 262

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM-RRAGWSPNGVTFI 463
              +    +VF  +       WN++I  +A +  L  +A+  +++M + AG  PN  T  
Sbjct: 263 CRQVESGRRVFDHILGRRIELWNAMISGYARN-GLDEKALILFIEMIKVAGLLPNTTTMA 321

Query: 464 NILAA-ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
           +++ A   S +    G ++HA  I+  +A++ T+ +AL+  Y KCG ++   ++F  M  
Sbjct: 322 SVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMP- 380

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR-----LDHFTFATVLSACASVATL 577
            ++ ++WN +I     +    +A+ L   M+    R      +  TF TV +AC+    +
Sbjct: 381 NKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLI 440

Query: 578 ERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR--NVYSW 630
             G+ +     H  GV    +    +    VD+  + G+++ A    + MP     V +W
Sbjct: 441 SEGLNLFYRMKHDHGVEPTSDHYACV----VDLLGRAGQLEEAYELVNTMPAEFDKVGAW 496

Query: 631 NSMISGYARH 640
           +S++     H
Sbjct: 497 SSLLGACRIH 506



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 129/256 (50%), Gaps = 8/256 (3%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G     F  N L+ +Y ++G +  +  LF+   DR+ VSW  ++S ++     +EA   F
Sbjct: 143 GIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFF 202

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG-LVSNVLIAMY 133
           + MV  G  L+   + SVL AC          G ++H  VL++N   +   V + L+ MY
Sbjct: 203 RLMVLEGVELDGVTIASVLPACSHL--ERLDVGKEIHAYVLRNNDLIENSFVGSALVDMY 260

Query: 134 GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPN 193
            +C +  +  RR+F+ I  R +  WN++IS Y++ G       LF  M +      L PN
Sbjct: 261 CNCRQ-VESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVA---GLLPN 316

Query: 194 EYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKI 253
             T  S++ A   S L+     ++I A   +  L SD+ VGSALV  +A+ G    +R++
Sbjct: 317 TTTMASVMPACVHS-LAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRV 375

Query: 254 FEQMIQKNVVSMNGLM 269
           F +M  KNV++ N L+
Sbjct: 376 FNEMPNKNVITWNVLI 391



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 81/182 (44%), Gaps = 21/182 (11%)

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
           S  R   SW   +     +    +A++    M   G R D+F F  VL A + +  L+ G
Sbjct: 52  SPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTG 111

Query: 581 MEVHACGVR-ACLEFDVVIGSALVDMYSKC--------------------GRIDYASRFF 619
            ++HA  V+       V + + LV+MY KC                    GR+D +   F
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALF 171

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           +    R++ SWN+MIS +++     +AL  F  M L+G   D VT   VL ACSH   +D
Sbjct: 172 ESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLD 231

Query: 680 EG 681
            G
Sbjct: 232 VG 233



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   +++  A D+ + + L+++Y + G L  + ++F+EMP++N ++W  ++      
Sbjct: 338 KEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMH 397

Query: 65  GMSNEACKMFKEMV----RAGFL-LNRYALGSVLRACQECG 100
           G   EA ++FK MV    R G    N     +V  AC   G
Sbjct: 398 GKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSG 438


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/662 (35%), Positives = 384/662 (58%), Gaps = 8/662 (1%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           K++H  L+  GL     +   L++  +  G I  +R VF  +       WN +I G  +N
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
             +++A++ +  M+   +   +F+    L +C+ L  + +G+ +H +  +LG D+DV V 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 396 NALLSLYADAGYLSRCLKVF--FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           N L++LYA    L     VF    +PE   VSW +++ A+A +   + EA++ +  MR+ 
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM-EALEIFSHMRKM 216

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
              P+ V  +++L A +     K G  +HA V+K  +  E  +  +L + Y KCG++   
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
           + +F +M +  + + WN+MISGY  N    +A+++   M+ +  R D  +  + +SACA 
Sbjct: 277 KILFDKM-KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           V +LE+   ++    R+    DV I SAL+DM++KCG ++ A   FD    R+V  W++M
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I GY  HG   +A++L+  M+  G  P+ VTF+G+L AC+H+G+V EG+  F  M+  + 
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMAD-HK 454

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           + PQ + ++C++DLLGRAG LD+  E I  MP+ P   +W  +L AC +   R  ELG  
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH--RHVELGEY 512

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
           AA  LF ++P N  +YV L+N+YA+   W+ VA+ R  MKE  + K+ GCSWV ++  + 
Sbjct: 513 AAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLE 572

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
            F  GD+SHP  + I  +++ +  ++++ G+V     +L DL  E  E+ +  HSE+IA+
Sbjct: 573 AFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAI 632

Query: 874 AFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           A+ L    +  P+RI KNLR C +CH+A K ISK+V REIV+RD+NRFHHF DG CSCGD
Sbjct: 633 AYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGD 692

Query: 933 YW 934
           YW
Sbjct: 693 YW 694



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 212/470 (45%), Gaps = 49/470 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H ++L  G  +  FL   LI+     GD+  A ++FD++P      W  I+ GY+  
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
               +A  M+  M  A    + +    +L+AC   G S  + G  VH  V +     D  
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACS--GLSHLQMGRFVHAQVFRLGFDADVF 155

Query: 125 VSNVLIAMYGSCLESTDCARRIFE--EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
           V N LIA+Y  C      AR +FE   +  R ++SW +I+S Y+Q G+ +   ++FS M+
Sbjct: 156 VQNGLIALYAKC-RRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMR 214

Query: 183 REGFRYSLKPNEYTFGSLITA------------AYSSVLSGSY-----LLQQILAMVKKA 225
           +      +KP+     S++ A             ++SV+         LL  +  M  K 
Sbjct: 215 K----MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC 270

Query: 226 GLLS------------DLYVGSALVSGFARLGNFYYARKIFEQMIQKNV----------V 263
           G ++            +L + +A++SG+A+ G    A  +F +MI K+V          +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330

Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
           S    +    + + ++ Y+ RS   D V + + L++M+AKCG+++ +R VF   + +D V
Sbjct: 331 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
            W+ MI G   +G   EAI  + AM R G+  ++ + +  L +C   G +  G       
Sbjct: 391 VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLM 450

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
               ++        ++ L   AG+L +  +V   MP    V+ W +++ A
Sbjct: 451 ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 17/308 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H  ++K G   +  L  +L  +Y + G +A+A  LFD+M   N + W  ++SGY
Sbjct: 239 KQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGY 298

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G + EA  MF EM+      +  ++ S + AC + G    +    ++  V +S+   
Sbjct: 299 AKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG--SLEQARSMYEYVGRSDYRD 356

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  +S+ LI M+  C  S + AR +F+    RD++ W+++I  Y   G       L+  M
Sbjct: 357 DVFISSALIDMFAKC-GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415

Query: 182 QREGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           +R G    + PN+ TF G L+   +S ++   +    ++A   K       Y  + ++  
Sbjct: 416 ERGG----VHPNDVTFLGLLMACNHSGMVREGWWFFNLMA-DHKINPQQQHY--ACVIDL 468

Query: 241 FARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG-- 296
             R G+   A ++ + M +Q  V     L+   +K + V  G      LF +     G  
Sbjct: 469 LGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHY 528

Query: 297 --LVNMYA 302
             L N+YA
Sbjct: 529 VQLSNLYA 536


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 271/818 (33%), Positives = 436/818 (53%), Gaps = 68/818 (8%)

Query: 108 MQVHCLVLKSNQTF---------DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISW 158
           +Q +C  L  N  F         D +  N +I  Y   + + + A+ +F+ +  RD++SW
Sbjct: 80  LQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAG-VGNMEFAQFLFDSMPERDVVSW 138

Query: 159 NSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQI 218
           NS++S Y Q G      ++F++M+       ++ +  TF  ++ A       G  L  Q+
Sbjct: 139 NSMLSCYLQNGFHRKSIEIFTKMRL----LEIQHDYATFAVVLKACTGIEDYGLGL--QV 192

Query: 219 LAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---- 274
             +  + G  SD+  G+ALV  ++      +A  IF +M ++N V  + ++ G  +    
Sbjct: 193 HCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRF 252

Query: 275 -------------------------------------GKEVHGYLIRSGL-FDMVAVGNG 296
                                                G ++H Y +++   +D + VG  
Sbjct: 253 TEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNI-VGTA 311

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
            ++MYAKC  + D+R VF         S N +I G  +     EA+  F ++++  L   
Sbjct: 312 TLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFD 371

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
             SL   L++C+++   + G Q+HG  +K GLD ++ V+N +L +YA  G L     +F 
Sbjct: 372 EISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFD 431

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            M   D VSWN++I A   +E  V E +  ++ M R+   P+  TF +++ A +      
Sbjct: 432 DMEIKDAVSWNAIIAAHEQNEH-VEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALN 490

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY 536
            G +VH +VIK  +  +  + +A++  Y KCG + + EKI  R+ E R  VSWNS+ISG+
Sbjct: 491 YGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERL-EERTTVSWNSIISGF 549

Query: 537 IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
              +    A++    M+Q G   D+FT+ATVL  CA++AT+E G ++H   ++  L  DV
Sbjct: 550 SSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDV 609

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
            I S +VDMYSKCG +  +   F+  P R+  +W++MI  YA HG G+ A+ LF +M+L 
Sbjct: 610 YIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQ 669

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
              P+H  F+ VL AC+H G VD+G  +F+ M   YGL PQ+E +SCMVDLLGR+G++++
Sbjct: 670 NVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNE 729

Query: 717 IEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANM 775
             E I  MP   + +IWRT+LG C  + N    E+  KAAN L +++PQ++  YVLL+N+
Sbjct: 730 ALELIESMPFEADDVIWRTLLGICRLQGN---VEVAEKAANSLLQLDPQDSSAYVLLSNV 786

Query: 776 YASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKEL 835
           YA  G W +VAK R  MK  ++KKE GCSW+ ++D VH F+ GD++HP  + IY++   L
Sbjct: 787 YAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLL 846

Query: 836 NQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
             +M+  GYVP+    L D E + ++   SY   KI V
Sbjct: 847 VDEMKWDGYVPEIDGFLLDEEVDEQD---SYEGHKITV 881



 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 179/648 (27%), Positives = 307/648 (47%), Gaps = 55/648 (8%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV   NT+I  Y  VG++  A  LFD MP+R+ VSW  ++S Y   G   ++ ++F +M 
Sbjct: 103 DVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMR 162

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
                 +      VL+AC   G   +  G+QVHCL ++     D +    L+ MY +C +
Sbjct: 163 LLEIQHDYATFAVVLKACT--GIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTC-K 219

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             D A  IF E+  R+ + W+++I+ Y +        KL+  M  EG   S    + TF 
Sbjct: 220 KLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVS----QATFA 275

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           S   +   + LS   L  Q+ A   K     D  VG+A +  +A+      ARK+F    
Sbjct: 276 SAFRSC--AGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFP 333

Query: 259 QKNVVSMNGL-----------------------------------------MEGRRKGKE 277
                S N L                                         ++G  +G +
Sbjct: 334 NPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQ 393

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +HG  ++ GL   + V N +++MYAKCG + ++  +F  M  KD+VSWN +I+  +QN  
Sbjct: 394 LHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEH 453

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
            EE +  F +M R  +   +++  S + +CA    +  G ++HG  +K G+  D  V +A
Sbjct: 454 VEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSA 513

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           ++ +Y   G L    K+   + E   VSWNS+I  F+ SE     A+ Y+  M + G  P
Sbjct: 514 IIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFS-SEKQGENALSYFSRMLQVGVIP 572

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           +  T+  +L   ++ +  +LG Q+H Q++K  + ++  I + ++  Y KCG M D   +F
Sbjct: 573 DNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMF 632

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
            + + +RD V+W++MI  Y ++ L   A+ L   M  +  + +H  F +VL ACA +  +
Sbjct: 633 EK-APKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFV 691

Query: 578 ERGMEVHACGVRACLEFDVVIG--SALVDMYSKCGRIDYASRFFDLMP 623
           ++G+      +R+    D  +   S +VD+  + G+++ A    + MP
Sbjct: 692 DKGLHYFR-EMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMP 738



 Score =  225 bits (574), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 147/568 (25%), Positives = 267/568 (47%), Gaps = 52/568 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   ++ GF  DV     L+++Y     L  A  +F EMP+RNSV W+ +++GY      
Sbjct: 193 HCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRF 252

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            E  K++K M+  G  +++    S  R+C   G S F+ G Q+H   LK+N  +D +V  
Sbjct: 253 TEGLKLYKVMLDEGMGVSQATFASAFRSC--AGLSAFELGTQLHAYALKTNFGYDNIVGT 310

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
             + MY  C    D AR++F         S N++I  Y+++   +   ++F  +Q+    
Sbjct: 311 ATLDMYAKCDRMVD-ARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLD 369

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           +    +E +    +TA   S + G     Q+  +  K GL  ++ V + ++  +A+ G  
Sbjct: 370 F----DEISLSGALTAC--SAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGAL 423

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------------- 274
             A  IF+ M  K+ VS N ++    +                                 
Sbjct: 424 MEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKAC 483

Query: 275 --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                   G EVHG +I+SG+     VG+ +++MY KCG + ++  +   +  + +VSWN
Sbjct: 484 AGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWN 543

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
           ++ISG       E A+  F  M + G++  NF+  + L  CA+L  + LG+QIHG+ LKL
Sbjct: 544 SIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKL 603

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
            L SDV +++ ++ +Y+  G +     +F   P+ D V+W+++I A+A    L  +A+K 
Sbjct: 604 QLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYA-YHGLGEDAIKL 662

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYG 505
           + +M+     PN   FI++L A +       G H        Y +  +    + ++   G
Sbjct: 663 FEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLG 722

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMI 533
           + G++++  ++   M    D+V W +++
Sbjct: 723 RSGQVNEALELIESMPFEADDVIWRTLL 750



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/608 (24%), Positives = 280/608 (46%), Gaps = 77/608 (12%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG 275
           +Q  A +   G +  ++V + L+  + +  N  YA  +F++M Q++V+S N ++ G    
Sbjct: 58  KQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFG---- 113

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
                                    YA  G ++ ++ +F  M  +D VSWN+M+S   QN
Sbjct: 114 -------------------------YAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQN 148

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G + ++I  F  MR   +     +    L +C  +    LG Q+H   +++G DSDV   
Sbjct: 149 GFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTG 208

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
            AL+ +Y+    L     +F  MPE + V W++VI  +  ++   +E +K Y  M   G 
Sbjct: 209 TALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRF-TEGLKLYKVMLDEGM 267

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
             +  TF +   + +  S  +LG Q+HA  +K N   +  +  A L  Y KC  M D  K
Sbjct: 268 GVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARK 327

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F        + S N++I GY   + + +A+ +   + +     D  + +  L+AC+++ 
Sbjct: 328 VFNTFPNPTRQ-SHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIK 386

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
               G+++H   V+  L+F++ + + ++DMY+KCG +  A   FD M +++  SWN++I+
Sbjct: 387 GYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIA 446

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYGL 694
            + ++ H ++ L LF  M      PD  TF  V+ AC+    ++ G + H + +    G 
Sbjct: 447 AHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMG- 505

Query: 695 IPQLEQF--SCMVDLLGRAG---ELDKIEEFIN--------------------------- 722
              L+ F  S ++D+  + G   E +KI E +                            
Sbjct: 506 ---LDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYF 562

Query: 723 ----KMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV--LLANMY 776
               ++ + P++  + TVL  C  AN    ELG++    + +++  + V Y+   + +MY
Sbjct: 563 SRMLQVGVIPDNFTYATVLDIC--ANLATVELGKQIHGQILKLQLHSDV-YIASTIVDMY 619

Query: 777 ASGGKWED 784
           +  G  +D
Sbjct: 620 SKCGNMQD 627



 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 219/471 (46%), Gaps = 58/471 (12%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   LK  F YD  +    +++Y +   +  A K+F+  P+    S   ++ GY  +  
Sbjct: 293 LHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQ 352

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA ++F+ + ++    +  +L   L AC      G+  G+Q+H L +K    F+  V+
Sbjct: 353 VLEALEIFRSLQKSYLDFDEISLSGALTACS--AIKGYLEGIQLHGLAVKCGLDFNICVA 410

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N ++ MY  C    + A  IF+++E +D +SWN+II+ + Q         LF  M     
Sbjct: 411 NTILDMYAKCGALME-ACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSM----L 465

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQ---QILAMVKKAGLLSDLYVGSALVSGFAR 243
           R +++P++YTFGS++ A      +G   L    ++   V K+G+  D +VGSA++  + +
Sbjct: 466 RSTMEPDDYTFGSVVKAC-----AGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCK 520

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------------------------- 274
            G    A KI E++ ++  VS N ++ G                                
Sbjct: 521 CGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATV 580

Query: 275 ------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                       GK++HG +++  L   V + + +V+MY+KCG + DSR +F     +D 
Sbjct: 581 LDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDY 640

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           V+W+ MI     +G  E+AI  F  M+   +  ++   IS L +CA +G++  G     E
Sbjct: 641 VTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFRE 700

Query: 383 GLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIG 431
                GLD  +   + ++ L   +G ++  L++   MP E D V W +++G
Sbjct: 701 MRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLG 751



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 196/432 (45%), Gaps = 33/432 (7%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
              C++L  I  G+Q H +    G    V VSN LL  Y     L+    VF  MP+ D 
Sbjct: 45  FQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDV 104

Query: 424 VSWNSVIGAFA------------DS---------EALVS---------EAVKYYLDMRRA 453
           +SWN++I  +A            DS          +++S         ++++ +  MR  
Sbjct: 105 ISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLL 164

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
               +  TF  +L A +      LG QVH   I+    ++     AL+  Y  C ++D  
Sbjct: 165 EIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHA 224

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
             IF  M E R+ V W+++I+GY+ N+   + + L   M+  G  +   TFA+   +CA 
Sbjct: 225 FNIFCEMPE-RNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAG 283

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           ++  E G ++HA  ++    +D ++G+A +DMY+KC R+  A + F+  P     S N++
Sbjct: 284 LSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNAL 343

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I GYAR     +AL +F  ++      D ++  G L+ACS      EG +    ++   G
Sbjct: 344 IVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQ-LHGLAVKCG 402

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           L   +   + ++D+  + G L +     + M I  +++ W  ++ A  +    +  L   
Sbjct: 403 LDFNICVANTILDMYAKCGALMEACLIFDDMEIK-DAVSWNAIIAAHEQNEHVEETLALF 461

Query: 754 AANMLFEMEPQN 765
            + +   MEP +
Sbjct: 462 VSMLRSTMEPDD 473



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 36/220 (16%)

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
            TF+ +   C+++  +  G + HA          V + + L+  Y KC  ++YA   FD 
Sbjct: 39  LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98

Query: 622 MPVRNVYSWNSMISGYA-------------------------------RHGHGDKALTLF 650
           MP R+V SWN+MI GYA                               ++G   K++ +F
Sbjct: 99  MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIF 158

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLG 709
           ++M+L     D+ TF  VL AC+  G+ D G       ++   G    +   + +VD+  
Sbjct: 159 TKMRLLEIQHDYATFAVVLKACT--GIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYS 216

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
              +LD       +MP   NS+ W  V+    R N R TE
Sbjct: 217 TCKKLDHAFNIFCEMP-ERNSVCWSAVIAGYVR-NDRFTE 254



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 55/96 (57%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H QILK     DV++ +T++++Y + G++  +  +F++ P R+ V+W+ ++  Y + 
Sbjct: 594 KQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYH 653

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G+  +A K+F+EM       N     SVLRAC   G
Sbjct: 654 GLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMG 689


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 238/616 (38%), Positives = 359/616 (58%), Gaps = 25/616 (4%)

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A+  +  MR+  +   +F + S L +C+ +    +G++IHG  +K GL SDV V NAL+ 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA------DSEALVS------------- 441
           +Y++ G L     +F  M E D VSW+++I A+          ++VS             
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 442 --EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
             E  + ++ M      PN +T ++++ +       +LG ++HA +++        +  A
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATA 272

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  YGKCGE+     IF  M + +D ++W +MIS Y     +  A  L   M   G R 
Sbjct: 273 LVDMYGKCGEIRSARAIFDSM-KNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRP 331

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           +  T  ++LS CA    L+ G   HA   +  +E DV++ +AL+DMY+KCG I  A R F
Sbjct: 332 NELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLF 391

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
                R++ +WN M++GY  HG+G+KAL LF++M+  G  P+ +TF+G L ACSHAGLV 
Sbjct: 392 SEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVV 451

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           EG   F+ M   +GL+P++E + CMVDLLGRAG LD+  + I  MP+TPN  IW  +L A
Sbjct: 452 EGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKK 799
           C     + + +G  AA  L  +EPQN    VL++N+YA+  +W DVA  RKA+K+  +KK
Sbjct: 512 C--KIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKK 569

Query: 800 EAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES 859
           E G S + +   VH F  GD +HP  + I E L E+++K+++AGY+P T   L +++ E 
Sbjct: 570 EPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEE 629

Query: 860 KEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSN 918
           KE  ++YHSEK+A+AF L   +   PIR++KNLR+C DCH+  K +SKI  R I++RD N
Sbjct: 630 KETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRN 689

Query: 919 RFHHFNDGKCSCGDYW 934
           RFHHF +G CSCG YW
Sbjct: 690 RFHHFREGSCSCGGYW 705



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 217/477 (45%), Gaps = 69/477 (14%)

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
           A   +  M +    ++ + + SVL+AC +   S  + G ++H   +K+    D  V N L
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQI--SVARMGKEIHGFSVKNGLVSDVFVVNAL 150

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           + MY  C  S   AR +F+++  RD++SW+++I  Y      I++F  FS  QR      
Sbjct: 151 MQMYSEC-GSLVSARLLFDKMSERDVVSWSTMIRAY------ITLFYGFS--QR------ 195

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
                            S++S +                       A+++G+ R  +   
Sbjct: 196 -----------------SIVSWT-----------------------AMIAGYIRCNDLEE 215

Query: 250 ARKIFEQMIQKNVVSMN----------GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVN 299
             ++F +MI++NV   +          G +   + GK +H Y++R+G    +A+   LV+
Sbjct: 216 GERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVD 275

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
           MY KCG I  +R++F  M  KD ++W  MIS   Q  C + A   F  MR +G+  +  +
Sbjct: 276 MYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELT 335

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           ++S LS CA  G + +G+  H    K G++ DV +  AL+ +YA  G +S   ++F    
Sbjct: 336 MVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAI 395

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
           + D  +WN ++  +        +A+K + +M   G  PN +TFI  L A S   +   G 
Sbjct: 396 DRDICTWNVMMAGYG-MHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGK 454

Query: 480 QVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
            +  ++I  + +  +      ++   G+ G +D+  K+   M    +   W +M++ 
Sbjct: 455 GLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 163/352 (46%), Gaps = 28/352 (7%)

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA 491
           +F+  E+    A+  Y  MR+     +     ++L A S  S+ ++G ++H   +K  + 
Sbjct: 82  SFSPFESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLV 141

Query: 492 NETTIENALLSCYGKCGEMDDCEKIFARMSER---------------------RDEVSWN 530
           ++  + NAL+  Y +CG +     +F +MSER                     R  VSW 
Sbjct: 142 SDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWT 201

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           +MI+GYI    L +   L   M++     +  T  +++ +C  V  ++ G  +HA  +R 
Sbjct: 202 AMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRN 261

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
                + + +ALVDMY KCG I  A   FD M  ++V +W +MIS YA+    D A  LF
Sbjct: 262 GFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLF 321

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
            QM+ +G  P+ +T V +LS C+  G +D G K F +     G+   +   + ++D+  +
Sbjct: 322 VQMRDNGVRPNELTMVSLLSLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALIDMYAK 380

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
            G++   +   ++  I  +   W  ++     A       G KA  +  EME
Sbjct: 381 CGDISGAQRLFSE-AIDRDICTWNVMM-----AGYGMHGYGEKALKLFTEME 426



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 144/294 (48%), Gaps = 39/294 (13%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWA---------------- 55
           +K+G   DVF+ N L+ +Y   G L SA  LFD+M +R+ VSW+                
Sbjct: 136 VKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQR 195

Query: 56  ------CIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQ 109
                  +++GY       E  ++F  M+      N   + S++ +C   G    + G +
Sbjct: 196 SIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVG--AVQLGKR 253

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
           +H  +L++       ++  L+ MYG C E    AR IF+ ++ +D+++W ++IS Y+Q  
Sbjct: 254 LHAYILRNGFGMSLALATALVDMYGKCGE-IRSARAIFDSMKNKDVMTWTAMISAYAQAN 312

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGL 227
                F+LF +M+  G R    PNE T  SL++  A   ++  G +      A + K G+
Sbjct: 313 CIDYAFQLFVQMRDNGVR----PNELTMVSLLSLCAVNGALDMGKWF----HAYIDKQGV 364

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY 281
             D+ + +AL+  +A+ G+   A+++F + I +++ + N +M G      +HGY
Sbjct: 365 EVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGY----GMHGY 414



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 127/267 (47%), Gaps = 12/267 (4%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  IL++GF   + L   L+++Y + G++ SA  +FD M +++ ++W  ++S Y   
Sbjct: 252 KRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQA 311

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
              + A ++F +M   G   N   + S+L  C   G      G   H  + K     D +
Sbjct: 312 NCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNG--ALDMGKWFHAYIDKQGVEVDVI 369

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           +   LI MY  C + +  A+R+F E   RD+ +WN +++ Y   G      KLF+ M+  
Sbjct: 370 LKTALIDMYAKCGDISG-AQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETL 428

Query: 185 GFRYSLKPNEYTF-GSLITAAYSS-VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           G    +KPN+ TF G+L   +++  V+ G  L ++   M+   GL+  +     +V    
Sbjct: 429 G----VKPNDITFIGALHACSHAGLVVEGKGLFEK---MIHDFGLVPKVEHYGCMVDLLG 481

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLM 269
           R G    A K+ E M     +++ G M
Sbjct: 482 RAGLLDEAYKMIESMPVTPNIAIWGAM 508


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 260/718 (36%), Positives = 402/718 (55%), Gaps = 20/718 (2%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLME------GRRKGKEVH 279
           D++  + LV G+A+ G F  A  ++ +M    I+ NV +   +++         +GKE+H
Sbjct: 162 DVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIH 221

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
            ++IR G    V VGN L+ MY KCG I ++R +F  M  +D +SWN MISG  +NG   
Sbjct: 222 AHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGL 281

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           E +  F  MR   +     ++ +  S+C  L    LG+ +HG  +K     D+S++N+L+
Sbjct: 282 EGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLI 341

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
            +Y+  G L     VF  M   D VSW ++I +   S  L  +AV+ Y  M   G  P+ 
Sbjct: 342 QMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLV-SHKLPFKAVETYKMMELEGILPDE 400

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           +T +++L+A +      LG ++H   IK  + +   + N+L+  Y KC  +D+  ++F  
Sbjct: 401 ITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRN 460

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           +S + + VSW S+I G   N    +A+ L +  M+   + +  T  +VLSACA +  L R
Sbjct: 461 ISGK-NVVSWTSLILGLRINNRSFEAL-LFFRQMKESMKPNSVTLISVLSACARIGALMR 518

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G E+HA  +R  + FD  + +A++DMY +CGR   A   F+    ++V +WN +++GYA+
Sbjct: 519 GKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQ 577

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
            G    A+ LF +M      PD +TF+ +L ACS +G+V EG ++F  M   Y L P L+
Sbjct: 578 QGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLK 637

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            ++C+VD+LGRAG+LD   +FI  MPI P++ IW  +L A CR + R  ELG  AA  +F
Sbjct: 638 HYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNA-CRIH-RNVELGEIAAKRVF 695

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           E + ++   Y+LL N+YA  G W+ V+K R  M+E  +  + GCSWV +K  VH F++GD
Sbjct: 696 EKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGD 755

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR 879
            SH +   I   L     KM++ G+         ++E  S+ D+   HSE+ A+AF L  
Sbjct: 756 NSHSQSKEINGVLDGFCSKMKENGFGNLKSSFTSEIE-SSRADIFCGHSERQAIAFGLIN 814

Query: 880 NSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD--YW 934
            +  +PI + KNL +C  CH+  KFIS IV REI +RD   +HHF DG CSCGD  YW
Sbjct: 815 TAPGMPIWVXKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 158/558 (28%), Positives = 266/558 (47%), Gaps = 54/558 (9%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           V L N L++++VR G+L  A  +F +M +R+  SW  +V GY   G  +EA  ++  M+ 
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
           A    N Y   SVL+ C   G S    G ++H  V++     D  V N LI MY  C + 
Sbjct: 192 AEIRPNVYTFPSVLKTC--AGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDI 249

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
           ++ AR +F+++  RD ISWN++IS Y + G  +   +LFS M+      S+ P+  T  +
Sbjct: 250 SN-ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMR----ELSVDPDLITMTT 304

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           + +A    +L    L + +   V K+    D+ + ++L+  ++ LG    A  +F +M  
Sbjct: 305 VASAC--ELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMES 362

Query: 260 KNVVSMNGL---------------------MEGRRK--------------------GKEV 278
           K+VVS   +                     +EG                       G  +
Sbjct: 363 KDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRL 422

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H   I++GL   V V N L++MY+KC  +D++  VFR + GK+ VSW ++I GL  N   
Sbjct: 423 HEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRS 482

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
            EA++ F  M ++ +  ++ +LIS LS+CA +G +M G++IH   L+ G+  D  + NA+
Sbjct: 483 FEALLFFRQM-KESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAI 541

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           L +Y   G     L  F    + D  +WN ++  +A  +     AV+ +  M      P+
Sbjct: 542 LDMYVRCGRKVPALNQFN-SQKKDVTAWNILLTGYA-QQGQAKLAVELFDKMLELEIHPD 599

Query: 459 GVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
            +TFI++L A S   M   G +  +    KYN+         ++   G+ G++DD     
Sbjct: 600 EITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFI 659

Query: 518 ARMSERRDEVSWNSMISG 535
             M  R D   W ++++ 
Sbjct: 660 QDMPIRPDAAIWGALLNA 677



 Score =  212 bits (540), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 163/627 (25%), Positives = 302/627 (48%), Gaps = 70/627 (11%)

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQ-ECGPSGFKFGMQVHCLVLKSNQTFD 122
           +G   +A K  + M+     +   A  ++LR C+    P     G +V+ LV  S     
Sbjct: 75  QGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDE---GSRVYELVSSSKSCLC 131

Query: 123 GLVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             + N L++M+   G+ L+    A  +F ++  RD+ SWN ++  Y++ G       L+ 
Sbjct: 132 VRLGNALLSMFVRFGNLLD----AWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYH 187

Query: 180 RMQREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           RM        ++PN YTF S++   A  S +  G    ++I A V + G  SD+ VG+AL
Sbjct: 188 RM----LWAEIRPNVYTFPSVLKTCAGVSDIARG----KEIHAHVIRFGFESDVDVGNAL 239

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-------------------------- 271
           ++ + + G+   AR +F++M +++ +S N ++ G                          
Sbjct: 240 ITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDL 299

Query: 272 ---------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                           R G+ VHGY+++S     +++ N L+ MY+  G ++++ +VF  
Sbjct: 300 ITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSR 359

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M  KD VSW  MI+ L  +    +A+  +  M  +G++    +L+S LS+CA +G + LG
Sbjct: 360 MESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLG 419

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI-GAFAD 435
            ++H   +K GL S V VSN+L+ +Y+    +   L+VF  +   + VSW S+I G   +
Sbjct: 420 IRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRIN 479

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           + +   EA+ ++  M+ +   PN VT I++L+A +       G ++HA  ++  V  +  
Sbjct: 480 NRSF--EALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGF 536

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           + NA+L  Y +CG        F   S+++D  +WN +++GY        A+ L   M++ 
Sbjct: 537 LPNAILDMYVRCGRKVPALNQFN--SQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLEL 594

Query: 556 GQRLDHFTFATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
               D  TF ++L AC+    +  G+E  +    +  L  ++   + +VD+  + G++D 
Sbjct: 595 EIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDD 654

Query: 615 ASRFFDLMPVR-NVYSWNSMISGYARH 640
           A  F   MP+R +   W ++++    H
Sbjct: 655 AYDFIQDMPIRPDAAIWGALLNACRIH 681



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 191/380 (50%), Gaps = 8/380 (2%)

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           V + NALLS++   G L     VF  M E D  SWN ++G +A +     EA+  Y  M 
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKA-GCFDEALNLYHRML 190

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
            A   PN  TF ++L   +  S    G ++HA VI++   ++  + NAL++ Y KCG++ 
Sbjct: 191 WAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDIS 250

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
           +   +F +M  +RD +SWN+MISGY  N    + + L   M +     D  T  TV SAC
Sbjct: 251 NARMLFDKMP-KRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASAC 309

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
             +     G  VH   V++    D+ + ++L+ MYS  GR++ A   F  M  ++V SW 
Sbjct: 310 ELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWT 369

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           +MI+    H    KA+  +  M+L+G LPD +T V VLSAC+  G +D G +    ++  
Sbjct: 370 AMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIR-LHEIAIK 428

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDK-IEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
            GL+  +   + ++D+  +   +D  +E F N   I+  +++  T L    R N R  E 
Sbjct: 429 TGLVSHVIVSNSLIDMYSKCKCVDNALEVFRN---ISGKNVVSWTSLILGLRINNRSFEA 485

Query: 751 GRKAANMLFEMEPQNAVNYV 770
                 M   M+P N+V  +
Sbjct: 486 LLFFRQMKESMKP-NSVTLI 504



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 211/472 (44%), Gaps = 54/472 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  +++ GF  DV + N LI +YV+ GD+++A  LFD+MP R+ +SW  ++SGY  
Sbjct: 217 GKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFE 276

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   E  ++F  M       +   + +V  AC+       + G  VH  V+KS    D 
Sbjct: 277 NGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNE--RLGRGVHGYVVKSEFGGDI 334

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            ++N LI MY S L   + A  +F  +E++D++SW ++I+            + +  M+ 
Sbjct: 335 SMNNSLIQMYSS-LGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMEL 393

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           EG    + P+E T  S+++A   + +    L  ++  +  K GL+S + V ++L+  +++
Sbjct: 394 EG----ILPDEITLVSVLSAC--ACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSK 447

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRR------------------------------ 273
                 A ++F  +  KNVVS   L+ G R                              
Sbjct: 448 CKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMKPNSVTLISVL 507

Query: 274 ----------KGKEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                     +GKE+H + +R+G+ FD   + N +++MY +CG    + + F     KD 
Sbjct: 508 SACARIGALMRGKEIHAHALRTGVGFDGF-LPNAILDMYVRCGRKVPALNQFNSQ-KKDV 565

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHG 381
            +WN +++G  Q G  + A+  F  M    +     + IS L +C+  G +  G +  + 
Sbjct: 566 TAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNI 625

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
              K  L  ++     ++ +   AG L         MP   D   W +++ A
Sbjct: 626 MKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNA 677


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 260/718 (36%), Positives = 402/718 (55%), Gaps = 20/718 (2%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLME------GRRKGKEVH 279
           D++  + LV G+A+ G F  A  ++ +M    I+ NV +   +++         +GKE+H
Sbjct: 162 DVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIH 221

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
            ++IR G    V VGN L+ MY KCG I ++R +F  M  +D +SWN MISG  +NG   
Sbjct: 222 AHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGL 281

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           E +  F  MR   +     ++ +  S+C  L    LG+ +HG  +K     D+S++N+L+
Sbjct: 282 EGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLI 341

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
            +Y+  G L     VF  M   D VSW ++I +   S  L  +AV+ Y  M   G  P+ 
Sbjct: 342 QMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLV-SHKLPFKAVETYKMMELEGILPDE 400

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           +T +++L+A +      LG ++H   IK  + +   + N+L+  Y KC  +D+  ++F  
Sbjct: 401 ITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRN 460

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           +S + + VSW S+I G   N    +A+ L +  M+   + +  T  +VLSACA +  L R
Sbjct: 461 ISGK-NVVSWTSLILGLRINNRSFEAL-LFFRQMKESMKPNSVTLISVLSACARIGALMR 518

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G E+HA  +R  + FD  + +A++DMY +CGR   A   F+    ++V +WN +++GYA+
Sbjct: 519 GKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQ 577

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
            G    A+ LF +M      PD +TF+ +L ACS +G+V EG ++F  M   Y L P L+
Sbjct: 578 QGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLK 637

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            ++C+VD+LGRAG+LD   +FI  MPI P++ IW  +L A CR + R  ELG  AA  +F
Sbjct: 638 HYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNA-CRIH-RNVELGEIAAKRVF 695

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           E + ++   Y+LL N+YA  G W+ V+K R  M+E  +  + GCSWV +K  VH F++GD
Sbjct: 696 EKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGD 755

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR 879
            SH +   I   L     KM++ G+         ++E  S+ D+   HSE+ A+AF L  
Sbjct: 756 NSHSQSKEINGVLDGFCSKMKENGFGNLKSSFTSEIE-SSRADIFCGHSERQAIAFGLIN 814

Query: 880 NSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD--YW 934
            +  +PI + KNL +C  CH+  KFIS IV REI +RD   +HHF DG CSCGD  YW
Sbjct: 815 TAPGMPIWVTKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 158/558 (28%), Positives = 266/558 (47%), Gaps = 54/558 (9%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           V L N L++++VR G+L  A  +F +M +R+  SW  +V GY   G  +EA  ++  M+ 
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
           A    N Y   SVL+ C   G S    G ++H  V++     D  V N LI MY  C + 
Sbjct: 192 AEIRPNVYTFPSVLKTC--AGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDI 249

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
           ++ AR +F+++  RD ISWN++IS Y + G  +   +LFS M+      S+ P+  T  +
Sbjct: 250 SN-ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMR----ELSVDPDLITMTT 304

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           + +A    +L    L + +   V K+    D+ + ++L+  ++ LG    A  +F +M  
Sbjct: 305 VASAC--ELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMES 362

Query: 260 KNVVSMNGL---------------------MEGRRK--------------------GKEV 278
           K+VVS   +                     +EG                       G  +
Sbjct: 363 KDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRL 422

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H   I++GL   V V N L++MY+KC  +D++  VFR + GK+ VSW ++I GL  N   
Sbjct: 423 HEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRS 482

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
            EA++ F  M ++ +  ++ +LIS LS+CA +G +M G++IH   L+ G+  D  + NA+
Sbjct: 483 FEALLFFRQM-KESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAI 541

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           L +Y   G     L  F    + D  +WN ++  +A  +     AV+ +  M      P+
Sbjct: 542 LDMYVRCGRKVPALNQFN-SQKKDVTAWNILLTGYA-QQGQAKLAVELFDKMLELEIHPD 599

Query: 459 GVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
            +TFI++L A S   M   G +  +    KYN+         ++   G+ G++DD     
Sbjct: 600 EITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFI 659

Query: 518 ARMSERRDEVSWNSMISG 535
             M  R D   W ++++ 
Sbjct: 660 QDMPIRPDAAIWGALLNA 677



 Score =  212 bits (540), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 163/627 (25%), Positives = 302/627 (48%), Gaps = 70/627 (11%)

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQ-ECGPSGFKFGMQVHCLVLKSNQTFD 122
           +G   +A K  + M+     +   A  ++LR C+    P     G +V+ LV  S     
Sbjct: 75  QGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDE---GSRVYELVSSSKSCLC 131

Query: 123 GLVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             + N L++M+   G+ L+    A  +F ++  RD+ SWN ++  Y++ G       L+ 
Sbjct: 132 VRLGNALLSMFVRFGNLLD----AWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYH 187

Query: 180 RMQREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           RM        ++PN YTF S++   A  S +  G    ++I A V + G  SD+ VG+AL
Sbjct: 188 RM----LWAEIRPNVYTFPSVLKTCAGVSDIARG----KEIHAHVIRFGFESDVDVGNAL 239

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-------------------------- 271
           ++ + + G+   AR +F++M +++ +S N ++ G                          
Sbjct: 240 ITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDL 299

Query: 272 ---------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                           R G+ VHGY+++S     +++ N L+ MY+  G ++++ +VF  
Sbjct: 300 ITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSR 359

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M  KD VSW  MI+ L  +    +A+  +  M  +G++    +L+S LS+CA +G + LG
Sbjct: 360 MESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLG 419

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI-GAFAD 435
            ++H   +K GL S V VSN+L+ +Y+    +   L+VF  +   + VSW S+I G   +
Sbjct: 420 IRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRIN 479

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           + +   EA+ ++  M+ +   PN VT I++L+A +       G ++HA  ++  V  +  
Sbjct: 480 NRSF--EALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGF 536

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           + NA+L  Y +CG        F   S+++D  +WN +++GY        A+ L   M++ 
Sbjct: 537 LPNAILDMYVRCGRKVPALNQFN--SQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLEL 594

Query: 556 GQRLDHFTFATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
               D  TF ++L AC+    +  G+E  +    +  L  ++   + +VD+  + G++D 
Sbjct: 595 EIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDD 654

Query: 615 ASRFFDLMPVR-NVYSWNSMISGYARH 640
           A  F   MP+R +   W ++++    H
Sbjct: 655 AYDFIQDMPIRPDAAIWGALLNACRIH 681



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 191/380 (50%), Gaps = 8/380 (2%)

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           V + NALLS++   G L     VF  M E D  SWN ++G +A +     EA+  Y  M 
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKA-GCFDEALNLYHRML 190

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
            A   PN  TF ++L   +  S    G ++HA VI++   ++  + NAL++ Y KCG++ 
Sbjct: 191 WAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDIS 250

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
           +   +F +M  +RD +SWN+MISGY  N    + + L   M +     D  T  TV SAC
Sbjct: 251 NARMLFDKMP-KRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASAC 309

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
             +     G  VH   V++    D+ + ++L+ MYS  GR++ A   F  M  ++V SW 
Sbjct: 310 ELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWT 369

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           +MI+    H    KA+  +  M+L+G LPD +T V VLSAC+  G +D G +    ++  
Sbjct: 370 AMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIR-LHEIAIK 428

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDK-IEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
            GL+  +   + ++D+  +   +D  +E F N   I+  +++  T L    R N R  E 
Sbjct: 429 TGLVSHVIVSNSLIDMYSKCKCVDNALEVFRN---ISGKNVVSWTSLILGLRINNRSFEA 485

Query: 751 GRKAANMLFEMEPQNAVNYV 770
                 M   M+P N+V  +
Sbjct: 486 LLFFRQMKESMKP-NSVTLI 504



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 211/472 (44%), Gaps = 54/472 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  +++ GF  DV + N LI +YV+ GD+++A  LFD+MP R+ +SW  ++SGY  
Sbjct: 217 GKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFE 276

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   E  ++F  M       +   + +V  AC+       + G  VH  V+KS    D 
Sbjct: 277 NGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNE--RLGRGVHGYVVKSEFGGDI 334

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            ++N LI MY S L   + A  +F  +E++D++SW ++I+            + +  M+ 
Sbjct: 335 SMNNSLIQMYSS-LGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMEL 393

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           EG    + P+E T  S+++A   + +    L  ++  +  K GL+S + V ++L+  +++
Sbjct: 394 EG----ILPDEITLVSVLSAC--ACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSK 447

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRR------------------------------ 273
                 A ++F  +  KNVVS   L+ G R                              
Sbjct: 448 CKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMKPNSVTLISVL 507

Query: 274 ----------KGKEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                     +GKE+H + +R+G+ FD   + N +++MY +CG    + + F     KD 
Sbjct: 508 SACARIGALMRGKEIHAHALRTGVGFDGF-LPNAILDMYVRCGRKVPALNQFNSQ-KKDV 565

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHG 381
            +WN +++G  Q G  + A+  F  M    +     + IS L +C+  G +  G +  + 
Sbjct: 566 TAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNI 625

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
              K  L  ++     ++ +   AG L         MP   D   W +++ A
Sbjct: 626 MKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNA 677


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/692 (36%), Positives = 383/692 (55%), Gaps = 75/692 (10%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GKE+H ++++ G    V V N L+NMYA CG + D+R +F      DSVSWN++++G  +
Sbjct: 160 GKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVK 219

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G  EEA + F  M +                                        ++  
Sbjct: 220 KGDVEEAKLIFDQMPQ---------------------------------------RNIVA 240

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           SN+++ L    G +    K+F  M E D VSW+++I  + +   +  EA+  +++M   G
Sbjct: 241 SNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGY-EQNGMYEEALVMFIEMNANG 299

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
              + V  +++L+A +  S+ K G  +H  VI+  + +   ++NAL+  Y   GE+ D +
Sbjct: 300 MRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQ 359

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM---------------------- 552
           K+F   S   D++SWNSMISG +    + KA  L   M                      
Sbjct: 360 KLF-NGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFS 418

Query: 553 --------MQRGQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
                   MQ GQ R D     +V+SAC  +A L++G  VHA   +  L+ +V++G+ L+
Sbjct: 419 ETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLL 478

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           DMY KCG ++ A   F+ M  + V SWN++I G A +G  +++L +FS+MK +G +P+ +
Sbjct: 479 DMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEI 538

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TF+GVL AC H GLVDEG  HF SM + +G+ P ++ + CMVDLLGRAG L++ E+ I  
Sbjct: 539 TFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIES 598

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           MP+ P+   W  +LGAC +     TE+G +    L E++P +   +VLL+N++AS G WE
Sbjct: 599 MPMAPDVATWGALLGACKKHG--DTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWE 656

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
           DV + R  MK+  V K  GCS +     VH F+AGD++HP  + +   L E+ ++++  G
Sbjct: 657 DVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEG 716

Query: 844 YVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFK 902
           Y P T     D++ E KE  +  HSEK+A+AF +LT +   PIRIMKNLR+C DCH+A K
Sbjct: 717 YAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAK 776

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            ISK   REIV+RD +RFH+F +G CSC DYW
Sbjct: 777 LISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 152/568 (26%), Positives = 277/568 (48%), Gaps = 51/568 (8%)

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
           D + +IF+ IE  +   WN+++  Y Q         L+  M     + ++ P+ YT+  +
Sbjct: 92  DYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLM----VKNNVGPDNYTYPLV 147

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
           + A    +L   +  ++I   V K G  SD+YV + L++ +A  GN   ARK+F++    
Sbjct: 148 VQACAVRLLE--FGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVL 205

Query: 261 NVVSMNGLMEGRRKGKEVHGYLIRSGLFDM-----VAVGNGLVNMYAKCGTIDDSRSVFR 315
           + VS N ++ G  K  +V    +   +FD      +   N ++ +  K G + ++  +F 
Sbjct: 206 DSVSWNSILAGYVKKGDVEEAKL---IFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFN 262

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M  KD VSW+ +ISG +QNG YEEA++ F  M  +G+      ++S LS+CA L  +  
Sbjct: 263 EMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKT 322

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAG----------------------YLSRCLK 413
           G+ IHG  +++G++S V++ NAL+ +Y+ +G                       +S C+K
Sbjct: 323 GKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMK 382

Query: 414 ---------VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
                    +F +MPE D VSW++VI  +A  +   SE +  + +M+     P+    ++
Sbjct: 383 CGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCF-SETLALFHEMQLGQIRPDETILVS 441

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           +++A +  +    G  VHA + K  +     +   LL  Y KCG +++  ++F  M E +
Sbjct: 442 VISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGM-EEK 500

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
              SWN++I G   N L+ +++++   M   G   +  TF  VL AC  +  ++ G    
Sbjct: 501 GVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHF 560

Query: 585 ACGV-RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSMISGYARHGH 642
           A  + +  +E +V     +VD+  + G ++ A +  + MP+  +V +W +++    +  H
Sbjct: 561 ASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKK--H 618

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLS 670
           GD  +      KL    PDH  F  +LS
Sbjct: 619 GDTEMGERVGRKLIELQPDHDGFHVLLS 646



 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 145/570 (25%), Positives = 255/570 (44%), Gaps = 66/570 (11%)

Query: 10  QILKHGFAYDVFLCNTLINVYVR---VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           Q++  GF  D F  + L+        +G L  + ++FD + + N   W  ++  Y     
Sbjct: 63  QMILTGFISDTFAASRLLKFSTDSPFIG-LDYSLQIFDRIENSNGFMWNTMMRAYIQSNS 121

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKF-GMQVHCLVLKSNQTFDGLV 125
           + +A  ++K MV+     + Y    V++A   C     +F G ++H  VLK     D  V
Sbjct: 122 AEKALLLYKLMVKNNVGPDNYTYPLVVQA---CAVRLLEFGGKEIHDHVLKVGFDSDVYV 178

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
            N LI MY  C    D AR++F+E    D +SWNSI++ Y ++GD      +F +M +  
Sbjct: 179 QNTLINMYAVCGNMRD-ARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQ-- 235

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
            R  +  N      ++      V+    L  +   M +K     D+   SAL+SG+ + G
Sbjct: 236 -RNIVASNSMI---VLLGKMGQVMEAWKLFNE---MDEK-----DMVSWSALISGYEQNG 283

Query: 246 NFYYARKIF----------EQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN 295
            +  A  +F          ++++  +V+S    +   + GK +HG +IR G+   V + N
Sbjct: 284 MYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQN 343

Query: 296 GLVNMYA-------------------------------KCGTIDDSRSVFRFMIGKDSVS 324
            L++MY+                               KCG+++ +R++F  M  KD VS
Sbjct: 344 ALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVS 403

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W+ +ISG  Q+ C+ E +  F  M+   +      L+S +S+C  L  +  G+ +H    
Sbjct: 404 WSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIR 463

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           K GL  +V +   LL +Y   G +   L+VF  M E    SWN++I   A    LV  ++
Sbjct: 464 KNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLA-VNGLVERSL 522

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSC 503
             + +M+  G  PN +TF+ +L A     +   G    A +I K+ +         ++  
Sbjct: 523 DMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDL 582

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            G+ G +++ EK+   M    D  +W +++
Sbjct: 583 LGRAGLLNEAEKLIESMPMAPDVATWGALL 612



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 128/501 (25%), Positives = 215/501 (42%), Gaps = 118/501 (23%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  +LK GF  DV++ NTLIN+Y   G++  A KLFDE P  +SVSW  I++GY  
Sbjct: 160 GKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVK 219

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           KG   EA  +F +M +                                  ++ SN     
Sbjct: 220 KGDVEEAKLIFDQMPQRN--------------------------------IVASNSMI-- 245

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
               VL+   G  +E    A ++F E++ +D++SW+++IS Y Q G       +F  M  
Sbjct: 246 ----VLLGKMGQVME----AWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNA 297

Query: 184 EGFRYS----------------LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
            G R                  +K  +   G +I     S ++   L   ++ M   +G 
Sbjct: 298 NGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVN---LQNALIHMYSGSGE 354

Query: 228 LSD---LYVGS---------ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK- 274
           + D   L+ GS         +++SG  + G+   AR +F+ M +K++VS + ++ G  + 
Sbjct: 355 IMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQH 414

Query: 275 ----------------------------------------GKEVHGYLIRSGLFDMVAVG 294
                                                   GK VH Y+ ++GL   V +G
Sbjct: 415 DCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILG 474

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
             L++MY KCG ++++  VF  M  K   SWN +I GL  NG  E ++  F  M+ +G++
Sbjct: 475 TTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVI 534

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGL--KLGLDSDVSVSNALLSLYADAGYLSRCL 412
            +  + +  L +C  +G +  G + H   +  K G++ +V     ++ L   AG L+   
Sbjct: 535 PNEITFMGVLGACRHMGLVDEG-RCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAE 593

Query: 413 KVFFLMP-EHDQVSWNSVIGA 432
           K+   MP   D  +W +++GA
Sbjct: 594 KLIESMPMAPDVATWGALLGA 614



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/383 (22%), Positives = 173/383 (45%), Gaps = 51/383 (13%)

Query: 387 GLDSDVSVSNALLSLYADAGY--LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           G  SD   ++ LL    D+ +  L   L++F  +   +   WN+++ A+  S +   +A+
Sbjct: 68  GFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNS-AEKAL 126

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
             Y  M +    P+  T+  ++ A +   +   G ++H  V+K    ++  ++N L++ Y
Sbjct: 127 LLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMY 186

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
             CG M D  K+F   S   D VSWNS+++GY+    + +A  +   M QR         
Sbjct: 187 AVCGNMRDARKLFDE-SPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQR--------- 236

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
                                         ++V  ++++ +  K G++  A + F+ M  
Sbjct: 237 ------------------------------NIVASNSMIVLLGKMGQVMEAWKLFNEMDE 266

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           +++ SW+++ISGY ++G  ++AL +F +M  +G   D V  V VLSAC+H  +V  G K 
Sbjct: 267 KDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTG-KM 325

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
              +    G+   +   + ++ +   +GE+   ++  N      + + W +++  C +  
Sbjct: 326 IHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSH-NLDQISWNSMISGCMK-- 382

Query: 745 CRKTELGRKAANMLFEMEPQNAV 767
           C   E  R     LF++ P+  +
Sbjct: 383 CGSVEKARA----LFDVMPEKDI 401



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 138/285 (48%), Gaps = 22/285 (7%)

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           +D   +IF R+ E  +   WN+M+  YI +    KA+ L   M++     D++T+  V+ 
Sbjct: 91  LDYSLQIFDRI-ENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQ 149

Query: 570 ACASVATLE-RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
           ACA V  LE  G E+H   ++   + DV + + L++MY+ CG +  A + FD  PV +  
Sbjct: 150 ACA-VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSV 208

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           SWNS+++GY + G  ++A  +F QM    P  + V    ++      G V E +K F  M
Sbjct: 209 SWNSILAGYVKKGDVEEAKLIFDQM----PQRNIVASNSMIVLLGKMGQVMEAWKLFNEM 264

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDK-----IEEFINKMPITPNSLIWRTVLGACCRA 743
            +       +  +S ++    + G  ++     IE   N M +  + ++  +VL AC   
Sbjct: 265 DE-----KDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRL--DEVVVVSVLSACAHL 317

Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYV-LLANMYASGGKWEDVAK 787
           +  KT  G+    ++  M  ++ VN    L +MY+  G+  D  K
Sbjct: 318 SIVKT--GKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQK 360



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/376 (22%), Positives = 147/376 (39%), Gaps = 46/376 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWA------ 55
           K  K+ H  +++ G    V L N LI++Y   G++  A KLF+   + + +SW       
Sbjct: 321 KTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGC 380

Query: 56  -------------------------CIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
                                     ++SGY      +E   +F EM       +   L 
Sbjct: 381 MKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILV 440

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           SV+ AC     +    G  VH  + K+    + ++   L+ MY  C    + A  +F  +
Sbjct: 441 SVISACTHL--AALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKC-GCVENALEVFNGM 497

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLS 210
           E + + SWN++I   +  G       +FS M+  G    + PNE TF  ++ A     L 
Sbjct: 498 EEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNG----VIPNEITFMGVLGACRHMGLV 553

Query: 211 GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
                    +M++K G+  ++     +V    R G    A K+ E M     V+  G + 
Sbjct: 554 DEGRC-HFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALL 612

Query: 271 G--RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
           G  ++ G    G  +   L ++    +G    L N++A  G  +D   V R M+ +  V 
Sbjct: 613 GACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEV-RGMMKQQGVV 671

Query: 325 WNTMISGLDQNGCYEE 340
                S ++ NG   E
Sbjct: 672 KTPGCSLIEANGVVHE 687


>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
 gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
          Length = 1029

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 272/881 (30%), Positives = 457/881 (51%), Gaps = 90/881 (10%)

Query: 2    KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
            +  +  H  +LK GF    F    L+++Y +  ++  A ++FD +   +++ WA +++GY
Sbjct: 177  EQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGY 236

Query: 62   THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
               G   +A  +F  M + G                   P       QV  + + S    
Sbjct: 237  HRVGRYQQALALFSRMEKMG-----------------SAPD------QVTYVTIISTLAS 273

Query: 122  DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
             G +S+               AR + + I+    ++WN++IS YSQ G    VF L+  M
Sbjct: 274  MGRLSD---------------ARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDM 318

Query: 182  QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            +R+G    L P   TF S+++AA S  ++     QQI A   K GL ++++VGS+L++ +
Sbjct: 319  KRQG----LMPTRSTFASMLSAAAS--MTAFDEGQQIHAAAVKHGLDANVFVGSSLINLY 372

Query: 242  ARLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRK---------- 274
             + G    A+K+F+   +KN+V  N ++ G                 RR           
Sbjct: 373  VKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFV 432

Query: 275  --------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                          G++VH   I++ +   + V N +++MY+K G ID ++++F  + GK
Sbjct: 433  SVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGK 492

Query: 321  DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
            DSVSWN +I GL  N   EEA+     M+  G+     S  + +++C+++     G+QIH
Sbjct: 493  DSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIH 552

Query: 381  GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
               +K  + S+ +V ++L+ LY+  G +    KV   +     V  N++I     +    
Sbjct: 553  CASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNR-E 611

Query: 441  SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE-TTIENA 499
             EA++ +  + + G+ P+  TF +IL+  +      +G QVH+  +K  + N+ T++  +
Sbjct: 612  DEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGIS 671

Query: 500  LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
            L+  Y KC  ++D  K+ A + + ++ V W + ISGY  N    +++ + W M     R 
Sbjct: 672  LVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRS 731

Query: 560  DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
            D  TFA+VL AC+ +A L  G E+H   +++         SAL+DMYSKCG +  +   F
Sbjct: 732  DEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIF 791

Query: 620  -DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLV 678
             +L   +N+  WNSMI G+A++G+ ++AL LF +M+     PD VT +GVL ACSHAGL+
Sbjct: 792  KELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLI 851

Query: 679  DEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
             EG   F SMSQVYG++P+++ ++C++DLLGR G L + +E I+++P   + +IW T L 
Sbjct: 852  SEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLA 911

Query: 739  ACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVK 798
            AC     +  E G+ AA  L EMEPQ +  YV L++++A+ G W +   AR+AM+E  V 
Sbjct: 912  AC--QMHKDEERGKVAAKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVM 969

Query: 799  KEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
            K  GCSW+T+ +  ++FV  D  HP+   IY+ L +L   M
Sbjct: 970  KFPGCSWITVGNKTNLFVVQDTHHPDTLGIYKMLDDLTGMM 1010



 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 218/750 (29%), Positives = 374/750 (49%), Gaps = 42/750 (5%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD--EMPDRNSVSWACIVSGYTH 63
           + H ++L+ G      L + L+++Y R G +  A +          +  + + ++S +  
Sbjct: 77  VLHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHAR 136

Query: 64  KGMSNEACKMFKEM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            G   +    F+ +    G   +++ L  VL AC   G    + G QVHC VLKS     
Sbjct: 137 SGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLG--ALEQGRQVHCDVLKSGFCSS 194

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
                 L+ MY  C+E  D ARR+F+ I   D I W S+I+ Y + G       LFSRM+
Sbjct: 195 AFCQAGLVDMYAKCVEVKD-ARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRME 253

Query: 183 REGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQI-----------LAMVKKAGLLS 229
           + G      P++ T+ ++I+  A+   +     LL++I           ++   ++GL S
Sbjct: 254 KMGS----APDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLES 309

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFD 289
           +++    L     R G     R  F  M+     S    M    +G+++H   ++ GL  
Sbjct: 310 EVF---GLYKDMKRQG-LMPTRSTFASML-----SAAASMTAFDEGQQIHAAAVKHGLDA 360

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
            V VG+ L+N+Y K G I D++ VF F   K+ V WN M+ G  QN   EE I  F  MR
Sbjct: 361 NVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMR 420

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
           R  L + +F+ +S L +C +L  + +G+Q+H   +K  +D+D+ V+NA+L +Y+  G + 
Sbjct: 421 RADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAID 480

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
               +F L+P  D VSWN++I   A +E    EAV     M+  G +P+ V+F   + A 
Sbjct: 481 VAKALFSLIPGKDSVSWNALIVGLAHNEE-EEEAVYMLKRMKCYGIAPDEVSFATAINAC 539

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
           S+    + G Q+H   IKYNV +   + ++L+  Y K G+++   K+ A + +    V  
Sbjct: 540 SNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHV-DASSMVPI 598

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
           N++I+G + N    +A+ L   +++ G +  +FTFA++LS C    +   G +VH+  ++
Sbjct: 599 NALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLK 658

Query: 590 -ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSMISGYARHGHGDKAL 647
            A L  D  +G +LV +Y KC  ++ A++    +P  +N+  W + ISGYA++G+ D++L
Sbjct: 659 SALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSL 718

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDL 707
            +F +M+      D  TF  VL ACS    + +G K    +    G +      S ++D+
Sbjct: 719 VMFWRMRSHDVRSDEATFASVLKACSEIAALTDG-KEIHGLIIKSGFVSYETAASALMDM 777

Query: 708 LGRAGEL----DKIEEFINKMPITP-NSLI 732
             + G++    +  +E  NK  I P NS+I
Sbjct: 778 YSKCGDVISSFEIFKELKNKQNIMPWNSMI 807


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 233/589 (39%), Positives = 360/589 (61%), Gaps = 11/589 (1%)

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
           AM R G+ +   +    +  C++ G +  G+++H      G +  + V N LL++Y    
Sbjct: 45  AMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFN 104

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
            L     +F  MPE + VSW ++I A+  S  L  +A+K  + M R G  PN  T+ ++L
Sbjct: 105 LLEEAEDLFDEMPERNVVSWTTMISAY--SNKLNDKALKCLILMFREGVRPNMFTYSSVL 162

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
            A       +   Q+H  +IK  + ++  + +AL+  Y K  ++D+   +F  M  R D 
Sbjct: 163 RACDGLPNLR---QLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTR-DL 218

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           V WNS+I G+  N    +A+NL   M + G   D  T  +VL AC  +A LE G +VH  
Sbjct: 219 VVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVH 278

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            ++   + D+++ +AL+DMY KCG ++ A+  F  M  ++V SW++M++G A++G+  +A
Sbjct: 279 VLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQA 336

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           L LF  MK  G  P+++T +GVL ACSHAGLV++G+ +F+SM +++G+ P  E + C++D
Sbjct: 337 LELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLID 396

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           LLGRAG LD+  + I++M   P+S+ WRT+LGA CR + R  +L   AA  + E+EP++A
Sbjct: 397 LLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGA-CRVH-RNVDLAIYAAKKIIELEPEDA 454

Query: 767 VNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKD 826
             Y+LL+N+YA+  +WEDVA+ RK M    ++K  GCSW+ +   +HVF+ GD SHP+ +
Sbjct: 455 GTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIE 514

Query: 827 LIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPI 885
            I ++L +L +++   GYVP T F L DLE E KED + YHSEK+A+ F L   S+   +
Sbjct: 515 EIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTV 574

Query: 886 RIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           RI KNLR+CGDCH   K +S++  R IV+RD  R+HHF DG CSCGDYW
Sbjct: 575 RIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 198/380 (52%), Gaps = 16/380 (4%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           ++GK VH ++   G    + V N L+NMY K   ++++  +F  M  ++ VSW TMIS  
Sbjct: 72  QEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAY 131

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
             N   ++A+     M R+G+  + F+  S L +C  L  +   +Q+H   +K GL+SDV
Sbjct: 132 -SNKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDV 187

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V +AL+ +Y+    L   L VF  MP  D V WNS+IG FA +    +EA+  +  M+R
Sbjct: 188 FVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSD-GNEALNLFKRMKR 246

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           AG+  +  T  ++L A +  ++ +LG QVH  V+K++   +  + NAL+  Y KCG ++D
Sbjct: 247 AGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFD--QDLILNNALIDMYCKCGSLED 304

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
               F+RM E +D +SW++M++G   N    +A+ L   M + G R ++ T   VL AC+
Sbjct: 305 ANSAFSRMVE-KDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACS 363

Query: 573 SVATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVR-NV 627
               +E+G        +    F V  G      L+D+  + GR+D A +    M    + 
Sbjct: 364 HAGLVEKGWYYFRSMKKL---FGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDS 420

Query: 628 YSWNSMISGYARHGHGDKAL 647
            +W +++     H + D A+
Sbjct: 421 VTWRTLLGACRVHRNVDLAI 440



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 145/270 (53%), Gaps = 15/270 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ K  H  I   G+   +F+ NTL+N+YV+   L  A  LFDEMP+RN VSW  ++S Y
Sbjct: 72  QEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAY 131

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           ++K ++++A K    M R G   N +   SVLRAC      G     Q+HC ++K+    
Sbjct: 132 SNK-LNDKALKCLILMFREGVRPNMFTYSSVLRAC-----DGLPNLRQLHCGIIKTGLES 185

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V + LI +Y S     D A  +F+E+ TRDL+ WNSII  ++Q  D      LF RM
Sbjct: 186 DVFVRSALIDVY-SKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRM 244

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           +R GF      ++ T  S++ A   + L+   L +Q+   V K     DL + +AL+  +
Sbjct: 245 KRAGFL----ADQATLTSVLRAC--TGLALLELGRQVHVHVLKFD--QDLILNNALIDMY 296

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
            + G+   A   F +M++K+V+S + ++ G
Sbjct: 297 CKCGSLEDANSAFSRMVEKDVISWSTMVAG 326



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 176/387 (45%), Gaps = 47/387 (12%)

Query: 187 RYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           R+ +  +  T+  LI   +A  +V  G  + + I       G    ++V + L++ + + 
Sbjct: 48  RHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFC----KGYEPKMFVVNTLLNMYVKF 103

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLM--------------------EGRRKG--------- 275
                A  +F++M ++NVVS   ++                    EG R           
Sbjct: 104 NLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMFREGVRPNMFTYSSVLR 163

Query: 276 --------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
                   +++H  +I++GL   V V + L+++Y+K   +D++  VF  M  +D V WN+
Sbjct: 164 ACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNS 223

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           +I G  QN    EA+  F  M+R G ++   +L S L +C  L  + LG+Q+H   LK  
Sbjct: 224 IIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK-- 281

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
            D D+ ++NAL+ +Y   G L      F  M E D +SW++++   A +     +A++ +
Sbjct: 282 FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQN-GYSRQALELF 340

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGK 506
             M+ +G  PN +T + +L A S   + + G      + K + V         L+   G+
Sbjct: 341 ESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGR 400

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMI 533
            G +D+  K+   M    D V+W +++
Sbjct: 401 AGRLDEAVKLIHEMECEPDSVTWRTLL 427



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 131/255 (51%), Gaps = 14/255 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H  I+K G   DVF+ + LI+VY +  DL +A  +FDEMP R+ V W  I+ G+   
Sbjct: 172 RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQN 231

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
              NEA  +FK M RAGFL ++  L SVLRAC   G +  + G QVH  VLK +Q  D +
Sbjct: 232 SDGNEALNLFKRMKRAGFLADQATLTSVLRACT--GLALLELGRQVHVHVLKFDQ--DLI 287

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           ++N LI MY  C    D A   F  +  +D+ISW+++++  +Q G +    +LF  M+  
Sbjct: 288 LNNALIDMYCKCGSLED-ANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKES 346

Query: 185 GFRYSLKPNEYT-FGSLITAAYSSVLS-GSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           G R    PN  T  G L   +++ ++  G Y  +   +M K  G+         L+    
Sbjct: 347 GSR----PNYITVLGVLFACSHAGLVEKGWYYFR---SMKKLFGVDPGREHYGCLIDLLG 399

Query: 243 RLGNFYYARKIFEQM 257
           R G    A K+  +M
Sbjct: 400 RAGRLDEAVKLIHEM 414



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 131/322 (40%), Gaps = 65/322 (20%)

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
           + + H   L +AM  +  M + G   D  T++ ++  C++   ++ G  VH        E
Sbjct: 28  ANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYE 87

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
             + + + L++MY K   ++ A   FD MP RNV SW +MIS Y+ +   DKAL     M
Sbjct: 88  PKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILM 146

Query: 654 KLDGPLPDHVTFVGVLSACS--------HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
             +G  P+  T+  VL AC         H G++  G +     S V+         S ++
Sbjct: 147 FREGVRPNMFTYSSVLRACDGLPNLRQLHCGIIKTGLE-----SDVF-------VRSALI 194

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLG--------------------------- 738
           D+  +  +LD      ++MP T + ++W +++G                           
Sbjct: 195 DVYSKWSDLDNALGVFDEMP-TRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQ 253

Query: 739 --------ACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARK 790
                   AC        ELGR+    + + +    +N  L+ +MY   G  ED   A  
Sbjct: 254 ATLTSVLRAC--TGLALLELGRQVHVHVLKFDQDLILNNALI-DMYCKCGSLEDANSAFS 310

Query: 791 AMKEAEVKKEAGCSWVTMKDGV 812
            M E +V      SW TM  G+
Sbjct: 311 RMVEKDV-----ISWSTMVAGL 327


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 250/676 (36%), Positives = 386/676 (57%), Gaps = 22/676 (3%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+ +H + I +GL   + V   L++MY KC  + D+  +F  M  +D V+WN M++G   
Sbjct: 144 GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAH 203

Query: 335 NGCYEEAIMNFCAMRRD--GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD- 391
           +G Y  A+ +  +M+     L  +  +L++ L   A  G +  G  +H   ++  L S+ 
Sbjct: 204 HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNR 263

Query: 392 ---------VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
                    V +  ALL +YA  G L    +VF  MP  ++V+W+++IG F     + ++
Sbjct: 264 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRM-TQ 322

Query: 443 AVKYYLDMRRAGW---SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
           A   +  M   G    SP  +   + L A +S    ++G Q+HA + K  V  + T  N+
Sbjct: 323 AFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNS 380

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           LLS Y K G +D    +F  M+ + D VS+++++SGY+ N    +A  +   M       
Sbjct: 381 LLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEP 439

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           D  T  +++ AC+ +A L+ G   H   +   L  +  I +AL+DMY+KCGRID + + F
Sbjct: 440 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 499

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           ++MP R++ SWN+MI+GY  HG G +A  LF +M   G  PD VTF+ +LSACSH+GLV 
Sbjct: 500 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 559

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           EG   F  M   YGL P++E + CMVDLL R G LD+  EFI  MP+  +  +W  +LGA
Sbjct: 560 EGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 619

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKK 799
           C     +  +LG+K + M+ E+ P+   N+VLL+N+Y++ G++++ A+ R   K    KK
Sbjct: 620 C--RVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKK 677

Query: 800 EAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES 859
             GCSW+ +   +H FV GD+SHP+   IY +L  +   ++  GY P T F L DLE E 
Sbjct: 678 SPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEE 737

Query: 860 KEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSN 918
           KE  +  HSEK+A+A+ +L+ +    I + KNLRVCGDCH+  K IS +  R I++RD+N
Sbjct: 738 KEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLLKRRAIIVRDAN 797

Query: 919 RFHHFNDGKCSCGDYW 934
           RFHHF +G+CSCGD+W
Sbjct: 798 RFHHFKNGQCSCGDFW 813



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 257/557 (46%), Gaps = 59/557 (10%)

Query: 30  YVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEA--CKMFKEMVRAGFLLNRY 87
           ++  G L+ A  LFD++P  +  ++  ++  Y+    +  A    +++ M+R     N Y
Sbjct: 67  HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126

Query: 88  ALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIF 147
                L+AC     +    G  +H   + +    D  VS  L+ MY  C    D A  IF
Sbjct: 127 TFPFALKACSAL--ADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAH-IF 183

Query: 148 EEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAY 205
             +  RDL++WN++++ Y+  G           MQ +  R  L+PN  T  +L+   A  
Sbjct: 184 ATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR--LRPNASTLVALLPLLAQQ 241

Query: 206 SSVLSGS----YLLQQILAMVK--KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
            ++  G+    Y ++  L   +  K+ L   + +G+AL+  +A+ G+  YAR++F+ M  
Sbjct: 242 GALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPA 301

Query: 260 KNVVSMNGLMEG------------------------------------------RRKGKE 277
           +N V+ + L+ G                                           R G++
Sbjct: 302 RNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQ 361

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +H  L +SG+   +  GN L++MYAK G ID + ++F  M  KD+VS++ ++SG  QNG 
Sbjct: 362 LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR 421

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
            EEA + F  M+   +     +++S + +C+ L  +  G+  HG  +  GL S+ S+ NA
Sbjct: 422 AEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA 481

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+ +YA  G +    +VF +MP  D VSWN++I  +     L  EA   +L+M   G+ P
Sbjct: 482 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYG-IHGLGKEATALFLEMNNLGFPP 540

Query: 458 NGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           +GVTFI +L+A S   +   G H  H     Y +         ++    + G +D+  + 
Sbjct: 541 DGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEF 600

Query: 517 FARMSERRDEVSWNSMI 533
              M  R D   W +++
Sbjct: 601 IQSMPLRADVRVWVALL 617



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 233/495 (47%), Gaps = 28/495 (5%)

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLIS 362
           G +  +  +F  +   D  ++N +I     +     A  +  +  M R  +  +N++   
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
            L +C++L     G+ IH   +  GL +D+ VS ALL +Y     L     +F  MP  D
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRA--GWSPNGVTFINILAAASSFSMGKLGHQ 480
            V+WN+++  +A    +   AV + L M+       PN  T + +L   +       G  
Sbjct: 191 LVAWNAMLAGYAH-HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249

Query: 481 VHAQVI----------KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
           VHA  I          K  + +   +  ALL  Y KCG +    ++F  M   R+EV+W+
Sbjct: 250 VHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPA-RNEVTWS 308

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASVATLERGMEVHACGVR 589
           ++I G++    + +A  L   M+ +G   L   + A+ L ACAS+  L  G ++HA   +
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAK 368

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
           + +  D+  G++L+ MY+K G ID A   FD M V++  S+++++SGY ++G  ++A  +
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 428

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           F +M+     PD  T V ++ ACSH   +  G     S+  + GL  +    + ++D+  
Sbjct: 429 FKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGLASETSICNALIDMYA 487

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME----PQN 765
           + G +D   +  N MP + + + W T++     A      LG++A  +  EM     P +
Sbjct: 488 KCGRIDLSRQVFNMMP-SRDIVSWNTMI-----AGYGIHGLGKEATALFLEMNNLGFPPD 541

Query: 766 AVNYVLLANMYASGG 780
            V ++ L +  +  G
Sbjct: 542 GVTFICLLSACSHSG 556



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 214/487 (43%), Gaps = 71/487 (14%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H   +  G   D+F+   L+++YV+   L  A+ +F  MP R+ V+W  +++GY H 
Sbjct: 145 RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 204

Query: 65  GMSNEACKMFKEMVRAGFLL--NRYALGSVLRACQECGPSGFKFGMQVHCLVLKS----- 117
           GM + A      M      L  N   L ++L    + G      G  VH   +++     
Sbjct: 205 GMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQG--ALAQGTSVHAYRIRACLHSN 262

Query: 118 ----NQTFDG-LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTI 172
               ++  DG L+   L+ MY  C  S   ARR+F+ +  R+ ++W+++I  +       
Sbjct: 263 RNSKSKLTDGVLLGTALLDMYAKC-GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMT 321

Query: 173 SVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLY 232
             F LF  M  +G  + L P          A+   +  G    +Q+ A++ K+G+ +DL 
Sbjct: 322 QAFLLFKAMLAQGLCF-LSPTSIASALRACASLDHLRMG----EQLHALLAKSGVHADLT 376

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR-------------------- 272
            G++L+S +A+ G    A  +F++M  K+ VS + L+ G                     
Sbjct: 377 AGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACN 436

Query: 273 ---------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
                                + G+  HG +I  GL    ++ N L++MYAKCG ID SR
Sbjct: 437 VEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSR 496

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
            VF  M  +D VSWNTMI+G   +G  +EA   F  M   G      + I  LS+C+  G
Sbjct: 497 QVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSG 556

Query: 372 WIMLGQQI-----HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS- 425
            ++ G+       HG GL   ++  +     ++ L +  G+L    +    MP    V  
Sbjct: 557 LVIEGKHWFHVMRHGYGLTPRMEHYI----CMVDLLSRGGFLDEAYEFIQSMPLRADVRV 612

Query: 426 WNSVIGA 432
           W +++GA
Sbjct: 613 WVALLGA 619



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 161/342 (47%), Gaps = 28/342 (8%)

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS-EAVKYYLDMRRAGWSPNGVTFI 463
           +G+LSR   +F  +P  D  ++N +I A++ S    + + +  Y  M R   +PN  TF 
Sbjct: 70  SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
             L A S+ +    G  +H   I   +  +  +  ALL  Y KC  + D   IFA M   
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPA- 188

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL--DHFTFATVLSACASVATLERGM 581
           RD V+WN+M++GY H+ +   A+  +  M  +  RL  +  T   +L   A    L +G 
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 248

Query: 582 EVHACGVRACLEFD----------VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
            VHA  +RACL  +          V++G+AL+DMY+KCG + YA R FD MP RN  +W+
Sbjct: 249 SVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWS 308

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGP-LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           ++I G+       +A  LF  M   G       +    L AC+          H +   Q
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACA-------SLDHLRMGEQ 361

Query: 691 VYGLIPQ------LEQFSCMVDLLGRAGELDKIEEFINKMPI 726
           ++ L+ +      L   + ++ +  +AG +D+     ++M +
Sbjct: 362 LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 403


>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/587 (42%), Positives = 348/587 (59%), Gaps = 11/587 (1%)

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS--VSNALLSLYADAGYLSR 410
            +S N SL S + S  S     LG+  H + +K  LD+ +   + N L+++Y+     + 
Sbjct: 3   FLSPN-SLASLVESAVSTQCSRLGRAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNS 60

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
              +  L P    V+W ++I     +    S A+ ++ +MRR    PN  TF     A+ 
Sbjct: 61  AQLLLSLTPNRSVVTWTALIAGSVQNGRFTS-ALFHFSNMRRDSIQPNDFTFPCAFKASG 119

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
           S     +G QVHA  +K    ++  +  +    Y K G  ++  K+F  M ER +  +WN
Sbjct: 120 SLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPER-NIATWN 178

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           + +S  +       A+       + G     F  ++VLSACA ++ LE G  VH   V+A
Sbjct: 179 AYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKA 238

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
           C+  ++ +GSALVDMY KCG I+ A R FD MP RN+ +WN+MI GYA  G  D A+TLF
Sbjct: 239 CVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLF 298

Query: 651 SQMKLDGP--LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
            +M        P++VTFV VLSACS AG V+ G + F+SM   YG+ P  E ++C+VDLL
Sbjct: 299 DEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLL 358

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
           GRAG +++  +FI KMPI P   +W  +LGA       K+ELG+ AA+ LFE++P ++ N
Sbjct: 359 GRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFG--KSELGKVAADNLFELDPLDSGN 416

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
           +VLL+NM+A+ G+WE+    RK MK+  +KK AGCSW+T  + VHVF A D SH     I
Sbjct: 417 HVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEI 476

Query: 829 YEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRI 887
              L +L  +M  AGY+P T FALFDLE E K   V YHSEKIA+AF +++  + +PIRI
Sbjct: 477 QAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRI 536

Query: 888 MKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            KNLR+CGDCHSA KFIS IVGREI++RD+N FH F D +CSC DYW
Sbjct: 537 TKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 583



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 209/428 (48%), Gaps = 16/428 (3%)

Query: 273 RKGKEVHGYLIRSGLFDMVA-VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
           R G+  H  +I++    + + + N LVNMY+K    + ++ +      +  V+W  +I+G
Sbjct: 23  RLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAG 82

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
             QNG +  A+ +F  MRRD +  ++F+      +  SL   ++G+Q+H   +K G  SD
Sbjct: 83  SVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISD 142

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           V V  +   +Y+ AG      K+F  MPE +  +WN+ + + +  E    +A+  +++ R
Sbjct: 143 VFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYL-SNSVLEGRYDDALTAFIEAR 201

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
           + G  P      ++L+A +  S+ ++G  VH   +K  V     + +AL+  YGKCG ++
Sbjct: 202 KEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIE 261

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL--DHFTFATVLS 569
           D E+ F  M E R+ V+WN+MI GY H      A+ L   M     R+  ++ TF  VLS
Sbjct: 262 DAERAFDEMPE-RNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLS 320

Query: 570 ACASVATLERGMEV-HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
           AC+   ++  GME+  +   R  +E      + +VD+  + G ++ A +F   MP+R   
Sbjct: 321 ACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTV 380

Query: 629 S-WNSMISGYARHGHGD----KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
           S W +++      G  +     A  LF    LD    +HV    + +A   AG  +E   
Sbjct: 381 SVWGALLGASKMFGKSELGKVAADNLFELDPLDS--GNHVLLSNMFAA---AGRWEEATL 435

Query: 684 HFKSMSQV 691
             K M  V
Sbjct: 436 VRKEMKDV 443



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 150/312 (48%), Gaps = 14/312 (4%)

Query: 235 SALVSGFARLGNFYYARKIFEQM----IQKN------VVSMNGLMEGRRKGKEVHGYLIR 284
           +AL++G  + G F  A   F  M    IQ N          +G +     GK+VH   ++
Sbjct: 77  TALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVK 136

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
           +G    V VG    +MY+K G  +++R +F  M  ++  +WN  +S     G Y++A+  
Sbjct: 137 AGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTA 196

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F   R++G+  ++F + S LS+CA L  + +G+ +H   +K  +  ++ V +AL+ +Y  
Sbjct: 197 FIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGK 256

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW--SPNGVTF 462
            G +    + F  MPE + V+WN++IG +A  +     AV  + +M       +PN VTF
Sbjct: 257 CGSIEDAERAFDEMPERNLVTWNAMIGGYAH-QGQADMAVTLFDEMTCGSHRVAPNYVTF 315

Query: 463 INILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           + +L+A S      +G ++   +  +Y +         ++   G+ G ++   +   +M 
Sbjct: 316 VCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMP 375

Query: 522 ERRDEVSWNSMI 533
            R     W +++
Sbjct: 376 IRPTVSVWGALL 387



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 151/319 (47%), Gaps = 12/319 (3%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   +K G   DVF+  +  ++Y + G    A K+FDEMP+RN  +W   +S    +
Sbjct: 128 KQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLE 187

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G  ++A   F E  + G     + + SVL AC   G S  + G  VH L +K+    +  
Sbjct: 188 GRYDDALTAFIEARKEGIEPTDFMVSSVLSAC--AGLSVLEVGKSVHTLAVKACVVGNIF 245

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V + L+ MYG C  S + A R F+E+  R+L++WN++I  Y+ +G       LF  M   
Sbjct: 246 VGSALVDMYGKC-GSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCG 304

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
             R  + PN  TF  +++A  S   S +  ++   +M  + G+       + +V    R 
Sbjct: 305 SHR--VAPNYVTFVCVLSAC-SRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRA 361

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRK--GKEVHGYLIRSGLFDMVAVGNG----LV 298
           G    A +  ++M  +  VS+ G + G  K  GK   G +    LF++  + +G    L 
Sbjct: 362 GMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLS 421

Query: 299 NMYAKCGTIDDSRSVFRFM 317
           NM+A  G  +++  V + M
Sbjct: 422 NMFAAAGRWEEATLVRKEM 440



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 114/487 (23%), Positives = 202/487 (41%), Gaps = 83/487 (17%)

Query: 1   SKDAKLFHLQILKH-GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           S+  +  H QI+K        F+ N L+N+Y ++    SA  L    P+R+ V+W  +++
Sbjct: 22  SRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIA 81

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           G    G    A   F  M R     N +      +A           G QVH L +K+ Q
Sbjct: 82  GSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSP--LVGKQVHALAVKAGQ 139

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D  V      MY S    T+ AR++F+E+  R++ +WN+ +S     G        F 
Sbjct: 140 ISDVFVGCSAFDMY-SKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFI 198

Query: 180 RMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
             ++EG    ++P ++   S+++A A  SVL    + + +  +  KA ++ +++VGSALV
Sbjct: 199 EARKEG----IEPTDFMVSSVLSACAGLSVLE---VGKSVHTLAVKACVVGNIFVGSALV 251

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLV 298
             + + G+   A + F++M ++N+V+ N ++ G                           
Sbjct: 252 DMYGKCGSIEDAERAFDEMPERNLVTWNAMIGG--------------------------- 284

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
             YA  G  D + ++F  M                            C   R   ++ N+
Sbjct: 285 --YAHQGQADMAVTLFDEMT---------------------------CGSHR---VAPNY 312

Query: 359 -SLISTLSSCASLGWIMLGQQIHGEGL--KLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
            + +  LS+C+  G + +G +I  E +  + G++        ++ L   AG + +  +  
Sbjct: 313 VTFVCVLSACSRAGSVNVGMEIF-ESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFI 371

Query: 416 FLMPEHDQVS-WNSVIGA---FADSE-ALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
             MP    VS W +++GA   F  SE   V+    + LD   +G   N V   N+ AAA 
Sbjct: 372 KKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSG---NHVLLSNMFAAAG 428

Query: 471 SFSMGKL 477
            +    L
Sbjct: 429 RWEEATL 435


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/662 (35%), Positives = 382/662 (57%), Gaps = 8/662 (1%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           +++H  L+  GL     +   L++  +  G I  +R VF  +       WN +I G  +N
Sbjct: 38  RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
             +++A++ +  M+   +   +F+    L +C  L  + +G+ +H +  +LG ++DV V 
Sbjct: 98  NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQ 157

Query: 396 NALLSLYADAGYLSRCLKVF--FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           N L++LYA    L     VF    +PE   VSW +++ A+A +   V EA++ +  MR+ 
Sbjct: 158 NGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPV-EALEIFSQMRKM 216

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
              P+ V  +++L A +     + G  +HA V+K  +  E  +  +L + Y KCG++   
Sbjct: 217 DVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATA 276

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
           + +F +M +  + + WN+MISGY  N     A++L   M+ +  R D  +  + +SACA 
Sbjct: 277 KILFDKM-KSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQ 335

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           V +LE+   +     R+    DV I SAL+DM++KCG ++ A   FD    R+V  W++M
Sbjct: 336 VGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAM 395

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I GY  HG   +A++L+  M+ DG  P+ VTF+G+L AC+H+G+V EG+  F  M+  + 
Sbjct: 396 IVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMAD-HK 454

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           + PQ + ++C++DLLGRAG LD+  E I  MP+ P   +W  +L AC +   R  ELG+ 
Sbjct: 455 INPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH--RHVELGKY 512

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
           AA  LF ++P N  +YV L+N+YA+   W+ VA+ R  MKE  + K+ GCSWV ++  + 
Sbjct: 513 AAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLE 572

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
            F  GD+SHP  + I  +++ +  ++++ G+V     +L DL  E  E+ +  HSE+I +
Sbjct: 573 GFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERITI 632

Query: 874 AFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           A+ L    +   +RI KNLR C +CH+A K ISK+VGREIV+RD+NRFHHF DG CSCGD
Sbjct: 633 AYGLISTPQGTTLRITKNLRACVNCHAATKLISKLVGREIVVRDTNRFHHFKDGVCSCGD 692

Query: 933 YW 934
           YW
Sbjct: 693 YW 694



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 217/470 (46%), Gaps = 49/470 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H ++L  G  +  FL   LI+     GD+  A ++FD++P      W  I+ GY+  
Sbjct: 38  RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
               +A  M+ +M  A    + +    +L+AC   G S  + G  VH  V +     D  
Sbjct: 98  NHFQDALLMYSKMQLARVSPDSFTFPHLLKACG--GLSHLQMGRFVHAQVFRLGFEADVF 155

Query: 125 VSNVLIAMYGSCLESTDCARRIFE--EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
           V N LIA+Y  C     CAR +FE   +  R ++SW +I+S Y+Q G+ +   ++FS+M+
Sbjct: 156 VQNGLIALYAKC-RRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMR 214

Query: 183 REGFRYSLKPNEYTFGSLITA------------AYSSVL-----SGSYLLQQILAMVKKA 225
               +  +KP+     S++ A             ++SV+     +   LL  +  M  K 
Sbjct: 215 ----KMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKC 270

Query: 226 GLLS------------DLYVGSALVSGFARLGNFYYARKIFEQMIQKNV----------V 263
           G ++            +L + +A++SG+A+ G    A  +F +MI K+V          +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAI 330

Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
           S    +    + + +  Y+ RS   D V + + L++M+AKCG+++ +RSVF   + +D V
Sbjct: 331 SACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVV 390

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
            W+ MI G   +G   EAI  + AM RDG+  ++ + +  L +C   G +  G       
Sbjct: 391 VWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRM 450

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
               ++        ++ L   AG+L +  +V   MP    V+ W +++ A
Sbjct: 451 ADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 17/308 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H  ++K G   +  L  +L  +Y + G +A+A  LFD+M   N + W  ++SGY
Sbjct: 239 EQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGY 298

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G + +A  +F EM+      +  ++ S + AC + G       M  +  V +S+   
Sbjct: 299 AKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEY--VSRSDYRD 356

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  +S+ LI M+  C  S +CAR +F+    RD++ W+++I  Y   G       L+  M
Sbjct: 357 DVFISSALIDMFAKC-GSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAM 415

Query: 182 QREGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           +R+G    + PN+ TF G LI   +S ++   +     +A   K       Y  + ++  
Sbjct: 416 ERDG----VHPNDVTFLGLLIACNHSGMVREGWWFFNRMAD-HKINPQQQHY--ACIIDL 468

Query: 241 FARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG-- 296
             R G+   A ++ + M +Q  V     L+   +K + V  G      LF +     G  
Sbjct: 469 LGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHY 528

Query: 297 --LVNMYA 302
             L N+YA
Sbjct: 529 VQLSNLYA 536


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 250/676 (36%), Positives = 386/676 (57%), Gaps = 22/676 (3%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+ +H + I +GL   + V   L++MY KC  + D+  +F  M  +D V+WN M++G   
Sbjct: 29  GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAH 88

Query: 335 NGCYEEAIMNFCAMRRD--GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD- 391
           +G Y  A+ +  +M+     L  +  +L++ L   A  G +  G  +H   ++  L  + 
Sbjct: 89  HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNR 148

Query: 392 ---------VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
                    V +  ALL +YA  G L    +VF  MP  ++V+W+++IG F     + ++
Sbjct: 149 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRM-TQ 207

Query: 443 AVKYYLDMRRAGW---SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
           A   +  M   G    SP  +   + L A +S    ++G Q+HA + K  V  + T  N+
Sbjct: 208 AFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNS 265

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           LLS Y K G +D    +F  M+ + D VS+++++SGY+ N    +A  +   M       
Sbjct: 266 LLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEP 324

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           D  T  +++ AC+ +A L+ G   H   +   L  +  I +AL+DMY+KCGRID + + F
Sbjct: 325 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 384

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           ++MP R++ SWN+MI+GY  HG G +A  LF +M   G  PD VTF+ +LSACSH+GLV 
Sbjct: 385 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 444

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           EG   F  M   YGL P++E + CMVDLL R G LD+  EFI  MP+  +  +W  +LGA
Sbjct: 445 EGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 504

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKK 799
            CR   +  +LG+K + M+ E+ P+   N+VLL+N+Y++ G++++ A+ R   K    KK
Sbjct: 505 -CRVY-KNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKK 562

Query: 800 EAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES 859
             GCSW+ +   +H FV GD+SHP+   IY +L  +   ++  GY P T F L DLE E 
Sbjct: 563 SPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEE 622

Query: 860 KEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSN 918
           KE  +  HSEK+A+A+ +L+ +    I + KNLRVCGDCH+  K IS +  R I++RD+N
Sbjct: 623 KEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDAN 682

Query: 919 RFHHFNDGKCSCGDYW 934
           RFHHF +G+CSCGD+W
Sbjct: 683 RFHHFKNGQCSCGDFW 698



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 233/508 (45%), Gaps = 57/508 (11%)

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
           M+R     N Y     L+AC     +    G  +H   + +    D  VS  L+ MY  C
Sbjct: 1   MLRHRVAPNNYTFPFALKACSAL--ADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKC 58

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
               D A  IF  +  RDL++WN++++ Y+  G           MQ +  R  L+PN  T
Sbjct: 59  ACLPDAAH-IFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR--LRPNAST 115

Query: 197 FGSLIT--AAYSSVLSGS----YLLQQILAMVK--KAGLLSDLYVGSALVSGFARLGNFY 248
             +L+   A   ++  G+    Y ++  L   +  K+ L   + +G+AL+  +A+ G+  
Sbjct: 116 LVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLL 175

Query: 249 YARKIFEQMIQKNVVSMNGLMEG------------------------------------- 271
           YAR++F+ M  +N V+ + L+ G                                     
Sbjct: 176 YARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRAC 235

Query: 272 -----RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                 R G+++H  L +SG+   +  GN L++MYAK G ID + ++F  M  KD+VS++
Sbjct: 236 ASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYS 295

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            ++SG  QNG  EEA + F  M+   +     +++S + +C+ L  +  G+  HG  +  
Sbjct: 296 ALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR 355

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
           GL S+ S+ NAL+ +YA  G +    +VF +MP  D VSWN++I  +     L  EA   
Sbjct: 356 GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYG-IHGLGKEATAL 414

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYG 505
           +L+M   G+ P+GVTFI +L+A S   +   G H  H     Y +         ++    
Sbjct: 415 FLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLS 474

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMI 533
           + G +D+  +    M  R D   W +++
Sbjct: 475 RGGFLDEAYEFIQSMPLRADVRVWVALL 502



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 217/450 (48%), Gaps = 26/450 (5%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M R  +  +N++    L +C++L     G+ IH   +  GL +D+ VS ALL +Y     
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA--GWSPNGVTFINI 465
           L     +F  MP  D V+WN+++  +A    +   AV + L M+       PN  T + +
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAH-HGMYHHAVAHLLSMQMQMHRLRPNASTLVAL 119

Query: 466 LAAASSFSMGKLGHQVHAQVI----------KYNVANETTIENALLSCYGKCGEMDDCEK 515
           L   +       G  VHA  I          K  + +   +  ALL  Y KCG +    +
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASV 574
           +F  M   R+EV+W+++I G++    + +A  L   M+ +G   L   + A+ L ACAS+
Sbjct: 180 VFDAMPA-RNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASL 238

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
             L  G ++HA   ++ +  D+  G++L+ MY+K G ID A   FD M V++  S+++++
Sbjct: 239 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALV 298

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
           SGY ++G  ++A  +F +M+     PD  T V ++ ACSH   +  G     S+  + GL
Sbjct: 299 SGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGL 357

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
             +    + ++D+  + G +D   +  N MP + + + W T++     A      LG++A
Sbjct: 358 ASETSICNALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMI-----AGYGIHGLGKEA 411

Query: 755 ANMLFEME----PQNAVNYVLLANMYASGG 780
             +  EM     P + V ++ L +  +  G
Sbjct: 412 TALFLEMNNLGFPPDGVTFICLLSACSHSG 441



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 209/481 (43%), Gaps = 59/481 (12%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H   +  G   D+F+   L+++YV+   L  A+ +F  MP R+ V+W  +++GY H 
Sbjct: 30  RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 89

Query: 65  GMSNEACKMFKEMVRAGFLL--NRYALGSVLRACQECGPSGFKFGMQVHCLVL------- 115
           GM + A      M      L  N   L ++L    + G       +  +C+         
Sbjct: 90  GMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRN 149

Query: 116 -KSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISV 174
            KS  T   L+   L+ MY  C  S   ARR+F+ +  R+ ++W+++I  +         
Sbjct: 150 SKSKLTDGVLLGTALLDMYAKC-GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 208

Query: 175 FKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVG 234
           F LF  M  +G  + L P          A+   +  G    +Q+ A++ K+G+ +DL  G
Sbjct: 209 FLLFKAMLAQGLCF-LSPTSIASALRACASLDHLRMG----EQLHALLAKSGVHADLTAG 263

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------------------- 272
           ++L+S +A+ G    A  +F++M  K+ VS + L+ G                       
Sbjct: 264 NSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVE 323

Query: 273 -------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
                              + G+  HG +I  GL    ++ N L++MYAKCG ID SR V
Sbjct: 324 PDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQV 383

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           F  M  +D VSWNTMI+G   +G  +EA   F  M   G      + I  LS+C+  G +
Sbjct: 384 FNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLV 443

Query: 374 MLGQQ-IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIG 431
           + G+   H  G   GL   +     ++ L +  G+L    +    MP    V  W +++G
Sbjct: 444 IEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLG 503

Query: 432 A 432
           A
Sbjct: 504 A 504


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 271/839 (32%), Positives = 445/839 (53%), Gaps = 67/839 (7%)

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           N   ++  +M+  GF+   Y    +L+    C  S   +  +V           D +  N
Sbjct: 23  NPGKQVHTQMIVTGFVPTIYVANCLLQF--YCKSSKMNYAFKV----FDRMPQRDVISWN 76

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI  Y   + +   A+ +F+ +  RD++SWNS++S Y   G      ++F RM+     
Sbjct: 77  TLIFGYAG-IGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMR----- 130

Query: 188 YSLK-PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
            SLK P++Y   ++I  A S +      LQ +  +  + G  +D+  GSALV  +++   
Sbjct: 131 -SLKIPHDYATFAVILKACSGIEDYGLGLQ-VHCLAIQMGFENDVVTGSALVDMYSKCKK 188

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGR---------------------------------- 272
              A ++F +M ++N+V  + ++ G                                   
Sbjct: 189 LDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRS 248

Query: 273 -------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                  + G ++HG+ ++S       +G   ++MYAKC  + D+  VF  +      S+
Sbjct: 249 CAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSY 308

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N +I G  +     +A+  F +++R+ L     SL   L++C+ +   + G Q+HG  +K
Sbjct: 309 NAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVK 368

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            GL  ++ V+N +L +Y   G L     +F  M   D VSWN++I A   +E +V + + 
Sbjct: 369 CGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIV-KTLS 427

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            ++ M R+   P+  T+ +++ A +       G ++H ++IK  +  +  + +AL+  YG
Sbjct: 428 LFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYG 487

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           KCG + + EKI AR+ E +  VSWNS+ISG+   +    A      M++ G   D++T+A
Sbjct: 488 KCGMLMEAEKIHARL-EEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYA 546

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           TVL  CA++AT+E G ++HA  ++  L  DV I S LVDMYSKCG +  +   F+  P R
Sbjct: 547 TVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKR 606

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
           +  +W++MI  YA HG G+KA+ LF +M+L    P+H  F+ VL AC+H G VD+G  +F
Sbjct: 607 DYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYF 666

Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANC 745
           + M   YGL PQ+E +SCMVDLLGR+G++++  + I  MP   + +IWRT+L     +NC
Sbjct: 667 QKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLL-----SNC 721

Query: 746 R---KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
           +     E+  KA N L +++PQ++  YVLLAN+YA  G W +VAK R  MK  ++KKE G
Sbjct: 722 KMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPG 781

Query: 803 CSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKE 861
           CSW+ ++D VH F+ GD++HP  + IYE+   L  +M+ AGYVP   F L D E E ++
Sbjct: 782 CSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPDIDFML-DEEMEEQD 839



 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 190/680 (27%), Positives = 333/680 (48%), Gaps = 51/680 (7%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV   NTLI  Y  +G++  A  LFD MP+R+ VSW  ++S Y H G++ ++ ++F  M 
Sbjct: 71  DVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMR 130

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
                 +      +L+AC   G   +  G+QVHCL ++     D +  + L+ MY  C +
Sbjct: 131 SLKIPHDYATFAVILKACS--GIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC-K 187

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             D A R+F E+  R+L+ W+++I+ Y Q    I   KLF  M + G   S       F 
Sbjct: 188 KLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247

Query: 199 S--------LITAAYSSVLSGSYLLQQI-----LAMVKKAGLLSDLY------------V 233
           S        L T  +   L   +    I     L M  K   + D +             
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQS 307

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNV----VSMNG------LMEGRRKGKEVHGYLI 283
            +A++ G+AR      A  IF+ + + N+    +S++G      +++   +G ++HG  +
Sbjct: 308 YNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAV 367

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
           + GL   + V N +++MY KCG + ++  +F  M  +D+VSWN +I+  +QN    + + 
Sbjct: 368 KCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLS 427

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            F +M R  +   +F+  S + +CA    +  G +IHG  +K G+  D  V +AL+ +Y 
Sbjct: 428 LFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYG 487

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
             G L    K+   + E   VSWNS+I  F+ S+     A +Y+  M   G  P+  T+ 
Sbjct: 488 KCGMLMEAEKIHARLEEKTTVSWNSIISGFS-SQKQSENAQRYFSQMLEMGIIPDNYTYA 546

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
            +L   ++ +  +LG Q+HAQ++K  + ++  I + L+  Y KCG M D   +F + + +
Sbjct: 547 TVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEK-APK 605

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME- 582
           RD V+W++MI  Y ++ L  KA+NL   M     + +H  F +VL ACA +  +++G+  
Sbjct: 606 RDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHY 665

Query: 583 ----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGY 637
               +   G+   +E      S +VD+  + G+++ A +  + MP   +   W +++S  
Sbjct: 666 FQKMLSHYGLDPQMEH----YSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNC 721

Query: 638 ARHGHGDKALTLF-SQMKLD 656
              G+ + A   F S ++LD
Sbjct: 722 KMQGNVEVAEKAFNSLLQLD 741



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/569 (26%), Positives = 271/569 (47%), Gaps = 52/569 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   ++ GF  DV   + L+++Y +   L  A ++F EMP+RN V W+ +++GY      
Sbjct: 161 HCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRF 220

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            E  K+FK+M++ G  +++    SV R+C   G S FK G Q+H   LKS+  +D ++  
Sbjct: 221 IEGLKLFKDMLKVGMGVSQSTYASVFRSC--AGLSAFKLGTQLHGHALKSDFAYDSIIGT 278

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
             + MY  C    D A ++F  +      S+N+II  Y+++   +    +F  +QR    
Sbjct: 279 ATLDMYAKCERMFD-AWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLG 337

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           +    +E +    +TA   SV+       Q+  +  K GL  ++ V + ++  + + G  
Sbjct: 338 F----DEISLSGALTAC--SVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGAL 391

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------------- 274
             A  IFE+M +++ VS N ++    +                                 
Sbjct: 392 MEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKAC 451

Query: 275 --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                   G E+HG +I+SG+     VG+ LV+MY KCG + ++  +   +  K +VSWN
Sbjct: 452 AGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWN 511

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
           ++ISG       E A   F  M   G++  N++  + L  CA++  I LG+QIH + LKL
Sbjct: 512 SIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKL 571

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
            L SDV +++ L+ +Y+  G +     +F   P+ D V+W+++I A+A    L  +A+  
Sbjct: 572 QLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYA-YHGLGEKAINL 630

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYG 505
           + +M+     PN   FI++L A +       G H     +  Y +  +    + ++   G
Sbjct: 631 FEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLG 690

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           + G++++  K+   M    D+V W +++S
Sbjct: 691 RSGQVNEALKLIESMPFEADDVIWRTLLS 719



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 150/606 (24%), Positives = 274/606 (45%), Gaps = 94/606 (15%)

Query: 254 FEQMIQK--NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
           F  ++QK  N+ ++N        GK+VH  +I +G    + V N L+  Y K   ++ + 
Sbjct: 9   FSHILQKCSNLKALN-------PGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAF 61

Query: 312 SVFRFMIGKDSVSWNTMISGLD-------------------------------QNGCYEE 340
            VF  M  +D +SWNT+I G                                  NG   +
Sbjct: 62  KVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRK 121

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           +I  F  MR   +     +    L +C+ +    LG Q+H   +++G ++DV   +AL+ 
Sbjct: 122 SIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVD 181

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +Y+    L    +VF  MPE + V W++VI  +  ++  + E +K + DM + G   +  
Sbjct: 182 MYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFI-EGLKLFKDMLKVGMGVSQS 240

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           T+ ++  + +  S  KLG Q+H   +K + A ++ I  A L  Y KC  M D  K+F  +
Sbjct: 241 TYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTL 300

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
                + S+N++I GY   +   KA+++   + +     D  + +  L+AC+ +     G
Sbjct: 301 PNPPRQ-SYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEG 359

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
           +++H   V+  L F++ + + ++DMY KCG +  A   F+ M  R+  SWN++I+ + ++
Sbjct: 360 IQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQN 419

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ--- 697
               K L+LF  M      PD  T+  V+ AC+    ++ G       ++++G I +   
Sbjct: 420 EEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYG-------TEIHGRIIKSGM 472

Query: 698 -LEQF--SCMVDLLGRAGELDKIEEF---------------------------------- 720
            L+ F  S +VD+ G+ G L + E+                                   
Sbjct: 473 GLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQ 532

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV--LLANMYAS 778
           + +M I P++  + TVL  C  AN    ELG++    + +++  + V Y+   L +MY+ 
Sbjct: 533 MLEMGIIPDNYTYATVLDVC--ANMATIELGKQIHAQILKLQLHSDV-YIASTLVDMYSK 589

Query: 779 GGKWED 784
            G  +D
Sbjct: 590 CGNMQD 595



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 129/266 (48%), Gaps = 41/266 (15%)

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           +TF +IL   S+      G QVH Q+I         + N LL  Y K  +M+   K+F R
Sbjct: 7   LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66

Query: 520 MSER------------------------------RDEVSWNSMISGYIHNELLPKAMNLV 549
           M +R                              RD VSWNS++S Y+HN +  K++ + 
Sbjct: 67  MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI- 125

Query: 550 WFMMQRGQRL--DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
            F+  R  ++  D+ TFA +L AC+ +     G++VH   ++   E DVV GSALVDMYS
Sbjct: 126 -FVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYS 184

Query: 608 KCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVG 667
           KC ++D A R F  MP RN+  W+++I+GY ++    + L LF  M   G      T+  
Sbjct: 185 KCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244

Query: 668 VLSACSHAGLVDEGFKHFKSMSQVYG 693
           V  +C+       G   FK  +Q++G
Sbjct: 245 VFRSCA-------GLSAFKLGTQLHG 263



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 142/263 (53%), Gaps = 9/263 (3%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K G  +++ + NT++++Y + G L  A  +F+EM  R++VSW  I++ +     
Sbjct: 362 LHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEE 421

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             +   +F  M+R+    + +  GSV++AC   G     +G ++H  ++KS    D  V 
Sbjct: 422 IVKTLSLFVSMLRSTMEPDDFTYGSVVKAC--AGQQALNYGTEIHGRIIKSGMGLDWFVG 479

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L+ MYG C    + A +I   +E +  +SWNSIIS +S +  + +  + FS+M   G 
Sbjct: 480 SALVDMYGKCGMLME-AEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMG- 537

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              + P+ YT+ +++    +  ++   L +QI A + K  L SD+Y+ S LV  +++ GN
Sbjct: 538 ---IIPDNYTYATVLDVCAN--MATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGN 592

Query: 247 FYYARKIFEQMIQKNVVSMNGLM 269
              +R +FE+  +++ V+ + ++
Sbjct: 593 MQDSRLMFEKAPKRDYVTWSAMI 615



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H QILK     DV++ +TL+++Y + G++  +  +F++ P R+ V+W+ ++  Y +
Sbjct: 561 GKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAY 620

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G+  +A  +F+EM       N     SVLRAC   G
Sbjct: 621 HGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMG 657


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1028

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 281/885 (31%), Positives = 448/885 (50%), Gaps = 91/885 (10%)

Query: 4    AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
             +  H  ++K G   + +    L+++Y +   L  A ++FD + D N+V W C+ SGY  
Sbjct: 179  GRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVK 238

Query: 64   KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
             G+  EA  +F+ M   G   +  A  +V+      G              LK       
Sbjct: 239  AGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGK-------------LKD------ 279

Query: 124  LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
                               AR +F E+ + D+++WN +IS + +RG  I   + F  M++
Sbjct: 280  -------------------ARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRK 320

Query: 184  EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
                 S+K    T GS+++A    +++   L   + A   K GL S++YVGS+LVS +++
Sbjct: 321  S----SVKSTRSTLGSVLSAI--GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374

Query: 244  LGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------------- 272
                  A K+FE + ++N V  N ++ G                                
Sbjct: 375  CEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSL 434

Query: 273  ----------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                        G + H  +I+  L   + VGN LV+MYAKCG ++D+R +F  M  +D+
Sbjct: 435  LSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDN 494

Query: 323  VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
            VSWNT+I G  Q+    EA   F  M   G++S    L STL +C ++  +  G+Q+H  
Sbjct: 495  VSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCL 554

Query: 383  GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
             +K GLD  +   ++L+ +Y+  G +    KVF  MPE   VS N++I  ++ +   + E
Sbjct: 555  SVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNN--LEE 612

Query: 443  AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT-IENALL 501
            AV  + +M   G +P+ +TF  I+ A        LG Q H Q+IK+  ++E   +  +LL
Sbjct: 613  AVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLL 672

Query: 502  SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
              Y     M +   +F+ +S  +  V W  M+SG+  N    +A+     M   G   D 
Sbjct: 673  GLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQ 732

Query: 562  FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
             TF TVL  C+ +++L  G  +H+       + D +  + L+DMY+KCG +  +S+ FD 
Sbjct: 733  ATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDE 792

Query: 622  MPVR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
            M  R NV SWNS+I+GYA++G+ + AL +F  M+    +PD +TF+GVL+ACSHAG V +
Sbjct: 793  MRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSD 852

Query: 681  GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC 740
            G K F+ M   YG+  +++  +CMVDLLGR G L + ++FI    + P++ +W ++LGA 
Sbjct: 853  GRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGA- 911

Query: 741  CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKE 800
            CR +      G  AA  L E+EPQN+  YVLL+N+YAS G+WE+    RKAM++  VKK 
Sbjct: 912  CRIHGDDMR-GEIAAERLIELEPQNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKV 970

Query: 801  AGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
             G SW+ +    H+F AGD+SH +   I   L++L   M+D   V
Sbjct: 971  PGYSWIDVGQRRHIFAAGDQSHSDIGKIEMFLEDLYDLMKDDAVV 1015



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 188/623 (30%), Positives = 315/623 (50%), Gaps = 41/623 (6%)

Query: 63  HKGMSN---EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           H+G+     E CK+FK       + +R AL               + G  VH   L    
Sbjct: 45  HQGLLEICLEQCKLFKSRKVFDEMPHRLALA-------------LRIGKAVHSKSLILGI 91

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             +G + N ++ +Y  C +    A + F  +E +D+ +WNS++S+YS  G    V + F 
Sbjct: 92  DSEGRLGNAIVDLYAKCAQ-VSYAEKQFNSLE-KDVTAWNSMLSMYSSIGQPGKVLRSFV 149

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            +    F   + PN++TF   I  + S+  +     +QI   + K GL  + Y G ALV 
Sbjct: 150 SL----FENLIFPNKFTFS--IVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVD 203

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG----------KEVHGYLIRSGLFD 289
            +A+      A+++F+ ++  N V    L  G  K           + + G   R     
Sbjct: 204 MYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLA 263

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
            V V    +N Y   G + D+R +F  M   D V+WN MISG  + GC   AI  F  MR
Sbjct: 264 FVTV----INTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMR 319

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
           +  + S+  +L S LS+   +  + LG  +H E +KLGL S++ V ++L+S+Y+    + 
Sbjct: 320 KSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKME 379

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
              KVF  + E + V WN++I  +A +     + ++ ++DM+ +G++ +  TF ++L+  
Sbjct: 380 AAAKVFEALEERNDVLWNAMIRGYAHN-GESHKVMELFMDMKSSGYNIDDFTFTSLLSTC 438

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
           +     ++G Q H+ +IK  +     + NAL+  Y KCG ++D  +IF  M + RD VSW
Sbjct: 439 AVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCD-RDNVSW 497

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
           N++I GY+ +E   +A +L   M   G   D    A+ L AC +V  L +G +VH   V+
Sbjct: 498 NTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVK 557

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
             L+  +  GS+L+DMYSKCG I+ A + F  MP  +V S N++I+GY+++ + ++A+ L
Sbjct: 558 CGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQN-NLEEAVVL 616

Query: 650 FSQMKLDGPLPDHVTFVGVLSAC 672
           F +M   G  P  +TF  ++ AC
Sbjct: 617 FQEMLTKGVNPSEITFATIVEAC 639



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 172/374 (45%), Gaps = 31/374 (8%)

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           ++G  VH++ +   + +E  + NA++  Y KC ++   EK F  +   +D  +WNSM+S 
Sbjct: 77  RIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL--EKDVTAWNSMLSM 134

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
           Y       K +     + +     + FTF+ VLS  A    +E G ++H   ++  LE +
Sbjct: 135 YSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERN 194

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
              G ALVDMY+KC R+  A R FD +   N   W  + SGY + G  ++A+ +F +M+ 
Sbjct: 195 SYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRG 254

Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG-EL 714
           +G  PDH+ FV V++     G + +    F  M       P +  ++ M+   G+ G E+
Sbjct: 255 EGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPS-----PDVVAWNVMISGHGKRGCEI 309

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRA--NCRKTELGRKAANMLFEMEPQNAVNYV-- 770
             IE F+N    +  S   R+ LG+   A       +LG        ++   + + YV  
Sbjct: 310 VAIEYFLNMRKSSVKST--RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI-YVGS 366

Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
            L +MY+   K E  AK  +A++E          W  M  G   +    ESH        
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEE-----RNDVLWNAMIRG---YAHNGESH-------- 410

Query: 831 KLKELNQKMRDAGY 844
           K+ EL   M+ +GY
Sbjct: 411 KVMELFMDMKSSGY 424



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 1/100 (1%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR-NSVSWACIVSG 60
           ++ +  H  I       D    NTLI++Y + GD+ S+S++FDEM  R N VSW  +++G
Sbjct: 749 REGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLING 808

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           Y   G + +A K+F  M ++  + +      VL AC   G
Sbjct: 809 YAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAG 848



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 12/213 (5%)

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            L  G  VH+  +   ++ +  +G+A+VD+Y+KC ++ YA + F+ +  ++V +WNSM+S
Sbjct: 75  ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSMLS 133

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
            Y+  G   K L  F  +  +   P+  TF  VLS  +    V+ G +   SM ++ GL 
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKM-GLE 192

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
                   +VD+  +   L   +   + + + PN++ W      C  +   K  L  +A 
Sbjct: 193 RNSYCGGALVDMYAKCDRLGDAQRVFDGI-VDPNTVCW-----TCLFSGYVKAGLPEEAV 246

Query: 756 NMLFEMEPQ----NAVNYVLLANMYASGGKWED 784
            +   M  +    + + +V + N Y S GK +D
Sbjct: 247 IVFERMRGEGHRPDHLAFVTVINTYISLGKLKD 279


>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
 gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/621 (39%), Positives = 370/621 (59%), Gaps = 13/621 (2%)

Query: 318 IGKDSVS-WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           I K S S ++T+I    ++   ++       ++  G +   F L   L   A    +M  
Sbjct: 65  IDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDS 124

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           Q++  E      + D+   N L+S YA  G L     +F  MPE D  SW ++I  +   
Sbjct: 125 QKLFDEMP----ERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRH 180

Query: 437 EALVSEAVKYYLDMRRAGWSP-NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           +   +EA++ +  M+R+  S  N  T  + LAAA++    ++G ++H  +++  + ++  
Sbjct: 181 DR-PNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEV 239

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           + +AL   YGKCG +++   IF +M +R D V+W +MI  Y  +    +  +L   +++ 
Sbjct: 240 VWSALSDMYGKCGSIEEARHIFDKMVDR-DIVTWTAMIDRYFQDGRRKEGFDLFADLLRS 298

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G R + FTF+ VL+ACA+  + E G +VH    R   +      SALV MYSKCG +  A
Sbjct: 299 GIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSA 358

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
            R F   P  +++SW S+I+GYA++G  D+A+  F  +   G  PDH+TFVGVLSAC+HA
Sbjct: 359 ERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHA 418

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           GLVD+G  +F S+ + YGL    + ++C++DLL R+G+ D+ E  I+KM + P+  +W +
Sbjct: 419 GLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWAS 478

Query: 736 VLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKE 794
           +LG C    N +   L ++AA  LFE+EP+N   YV LAN+YA+ G W +VAK RK M +
Sbjct: 479 LLGGCRIHGNLK---LAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDD 535

Query: 795 AEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFD 854
             V K+ G SW+ +K  VHVF+ GD+SHP+   I E L +L+++M++ G+VP T F L D
Sbjct: 536 RGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHD 595

Query: 855 LEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIV 913
           +E E KE  +SYHSEK+AVAF +++     PI++ KNLR C DCH+A KFISKI  R+I+
Sbjct: 596 VEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKITNRKII 655

Query: 914 LRDSNRFHHFNDGKCSCGDYW 934
           +RDSNRFH F DG CSC DYW
Sbjct: 656 VRDSNRFHFFEDGHCSCRDYW 676



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 220/453 (48%), Gaps = 43/453 (9%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           ++GK+VH ++  SG    + + N L+ MYAKC ++ DS+ +F  M  +D  SWN +ISG 
Sbjct: 87  QQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGY 146

Query: 333 DQNGCYEEAIMNFCAM--------------------------------RRDGLMSSNFSL 360
            + G  +EA   F  M                                R D   S+ F++
Sbjct: 147 AKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTV 206

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
            S L++ A++  + +G++IHG  ++ GLDSD  V +AL  +Y   G +     +F  M +
Sbjct: 207 SSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVD 266

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            D V+W ++I  +   +    E    + D+ R+G  PN  TF  +L A ++ +  +LG +
Sbjct: 267 RDIVTWTAMIDRYF-QDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKK 325

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           VH  + +      +   +AL+  Y KCG M   E++F + + + D  SW S+I+GY  N 
Sbjct: 326 VHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVF-KETPQPDLFSWTSLIAGYAQNG 384

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-VHACGVRACLEFDVVIG 599
              +A+     +++ G + DH TF  VLSACA    +++G++  H+   +  L       
Sbjct: 385 QPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHY 444

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGH---GDKALTLFSQMKL 655
           + ++D+ ++ G+ D A      M ++ + + W S++ G   HG+     +A     +++ 
Sbjct: 445 ACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEP 504

Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           + P     T+V + +  + AG+  E  K  K+M
Sbjct: 505 ENP----ATYVTLANIYATAGMWSEVAKIRKTM 533



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 122/493 (24%), Positives = 224/493 (45%), Gaps = 64/493 (12%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G +VH  +  S       + N L+ MY  C    D ++++F+E+  RDL SWN +IS Y+
Sbjct: 89  GKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMD-SQKLFDEMPERDLCSWNILISGYA 147

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
           + G                                            LLQ+  ++  K  
Sbjct: 148 KMG--------------------------------------------LLQEAKSLFDKMP 163

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR-----------RKG 275
              D +  +A++SG+ R      A ++F  M + +    N                 R G
Sbjct: 164 E-RDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIG 222

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           KE+HGY++R+GL     V + L +MY KCG+I+++R +F  M+ +D V+W  MI    Q+
Sbjct: 223 KEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQD 282

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G  +E    F  + R G+  + F+    L++CA+     LG+++HG   ++G D     +
Sbjct: 283 GRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAA 342

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           +AL+ +Y+  G +    +VF   P+ D  SW S+I  +A +     EA++Y+  + ++G 
Sbjct: 343 SALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQN-GQPDEAIRYFELLVKSGT 401

Query: 456 SPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
            P+ +TF+ +L+A +   +   G    H+   +Y + +       ++    + G+ D+ E
Sbjct: 402 QPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAE 461

Query: 515 KIFARMSERRDEVSWNSMISG-YIHNEL-LPKAMNLVWFMMQRGQRLDHFTFATVLSAC- 571
            I ++MS + D+  W S++ G  IH  L L +      F ++      + T A + +   
Sbjct: 462 NIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAG 521

Query: 572 --ASVATLERGME 582
             + VA + + M+
Sbjct: 522 MWSEVAKIRKTMD 534



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 196/409 (47%), Gaps = 31/409 (7%)

Query: 22  LC--NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           LC  N LI+ Y ++G L  A  LFD+MP+R++ SW  ++SGY      NEA ++F+ M R
Sbjct: 136 LCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKR 195

Query: 80  A-GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           +     N++ + S L A         + G ++H  ++++    D +V + L  MYG C  
Sbjct: 196 SDNSKSNKFTVSSALAAAAAV--PCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKC-G 252

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
           S + AR IF+++  RD+++W ++I  Y Q G     F LF+ + R G R    PNE+TF 
Sbjct: 253 SIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIR----PNEFTFS 308

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
            ++ A  +   +   L +++   + + G     +  SALV  +++ GN   A ++F++  
Sbjct: 309 GVLNACANQ--TSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETP 366

Query: 259 QKNVVSMNGLMEGRRKG---KEVHGY---LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
           Q ++ S   L+ G  +     E   Y   L++SG         G+++  A  G +D    
Sbjct: 367 QPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLD 426

Query: 313 VF-----RFMIGKDSVSWNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLS 365
            F     ++ +   +  +  +I  L ++G ++EA  I++  +M+ D      F   S L 
Sbjct: 427 YFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPD-----KFLWASLLG 481

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
            C   G + L Q+   E L      + +    L ++YA AG  S   K+
Sbjct: 482 GCRIHGNLKLAQRA-AEALFEIEPENPATYVTLANIYATAGMWSEVAKI 529



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 146/342 (42%), Gaps = 37/342 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  I++ G   D  + + L ++Y + G +  A  +FD+M DR+ V+W  ++  Y  
Sbjct: 222 GKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQ 281

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   E   +F +++R+G   N +    VL AC     +  + G +VH  + +       
Sbjct: 282 DGRRKEGFDLFADLLRSGIRPNEFTFSGVLNAC--ANQTSEELGKKVHGYMTRVGFDPFS 339

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
             ++ L+ MY  C      A R+F+E    DL SW S+I+ Y+Q G      + F  + +
Sbjct: 340 FAASALVHMYSKCGNMV-SAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVK 398

Query: 184 EGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            G     +P+  TF G L   A++ ++     L    ++ ++ GL       + ++   A
Sbjct: 399 SG----TQPDHITFVGVLSACAHAGLVDKG--LDYFHSIKEQYGLTHTADHYACIIDLLA 452

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYL-----IRSGLFDM----VAV 293
           R G F  A  I  +M  K    +   + G   G  +HG L         LF++     A 
Sbjct: 453 RSGQFDEAENIISKMSMKPDKFLWASLLG---GCRIHGNLKLAQRAAEALFEIEPENPAT 509

Query: 294 GNGLVNMYAKCG----------TIDDSRSVFRFMIGKDSVSW 325
              L N+YA  G          T+DD     R ++ K  +SW
Sbjct: 510 YVTLANIYATAGMWSEVAKIRKTMDD-----RGVVKKPGLSW 546


>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Brachypodium distachyon]
          Length = 642

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 252/635 (39%), Positives = 379/635 (59%), Gaps = 17/635 (2%)

Query: 309 DSRSVFRFMIGKDSVSWN--TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
           D RS  R   G  S      ++ S L  +G +  A+     +   G+ +   SL   +  
Sbjct: 16  DRRSRRRLHSGSHSHPHPLVSIFSRLCLDGPFTAALALLPDIAAAGVRADPVSLCRLIKL 75

Query: 367 CASLGWIMLGQQIHGE------GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           C   G +  G+ IH        G        + VSN+L+S+YA  G L   L++F  MP+
Sbjct: 76  CVRHGTVGDGRAIHRHVSLCAHGGGGATHGSLFVSNSLVSMYAKFGMLDDALELFGGMPQ 135

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            + VSW +V+ A A++     EA+++ ++MRR G + N  TF ++L A  +   G L   
Sbjct: 136 RNVVSWTTVVAALANAPGRKKEALRFLVEMRRDGVAANSYTFSSVLGACGT--PGVLA-A 192

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +HA +IK  + ++  + ++L+  Y K G++D    +F  M    D V WNS+I+G+  + 
Sbjct: 193 MHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTC-DLVVWNSIIAGFAQSG 251

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
               AM L   M + G   +  T  +VL AC  +  LE G +VHA  ++   + D+++ +
Sbjct: 252 DGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAHVLK--YDRDLILHN 309

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           AL+DMY KCG +  A   F  M  R+V SW++MISG A++G   +AL +F  MK +GP P
Sbjct: 310 ALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTP 369

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           +++T VGVL ACSHAGLV++G+ +F+SM +++G+ P+ E  +CMVDLLGRAG+LD+  +F
Sbjct: 370 NNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKF 429

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           I +M   P+S+IWRT+LGA CR + +   L   AA  + ++EP++    +LL+N+YA   
Sbjct: 430 IGEMKFEPDSVIWRTLLGA-CRMH-KNATLASYAATEILKLEPEDQGARILLSNIYADLR 487

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
           +W +  K+ K M++  VKKE G SW+ +   VHVF+AG+ SHP  D I ++L  L ++ +
Sbjct: 488 QWSNAEKSWKTMRDQGVKKEPGRSWIELGKLVHVFIAGELSHPCSDRIVQELNRLIRRAK 547

Query: 841 DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHS 899
           D GYVPQT+F L DL  E KEDL+ YHSEK+A+AF  +      P+RIMKNLR+CGDCH+
Sbjct: 548 DLGYVPQTEFVLQDLGTEQKEDLLKYHSEKLAIAFGTMNSMEGKPVRIMKNLRICGDCHA 607

Query: 900 AFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             K +SK  G+ I++RD  RFHHF  G CSCGDYW
Sbjct: 608 FAKLVSKTEGKAIIIRDPVRFHHFQHGVCSCGDYW 642



 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 189/381 (49%), Gaps = 41/381 (10%)

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL-DQNGCYEEAIMNFCAMRRD 351
           V N LV+MYAK G +DD+  +F  M  ++ VSW T+++ L +  G  +EA+     MRRD
Sbjct: 109 VSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRD 168

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G+ +++++  S L +C + G +     +H + +K+GLDSDV V ++L+  Y   G L   
Sbjct: 169 GVAANSYTFSSVLGACGTPGVL---AAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSG 225

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
             VF  M   D V WNS+I  FA S   V  A++ ++ M+ +G+  N  T  ++L A + 
Sbjct: 226 RGVFDEMVTCDLVVWNSIIAGFAQSGDGVG-AMELFMRMKESGFLANQGTLTSVLRACTG 284

Query: 472 FSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
             M ++G QVHA V+KY+   +  + NALL  Y KCG + D + +F+RM + RD +SW++
Sbjct: 285 MVMLEVGRQVHAHVLKYD--RDLILHNALLDMYCKCGCLLDADALFSRMHD-RDVISWST 341

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC 591
           MISG   N    +A+ +   M   G   ++ T   VL AC+    +E G           
Sbjct: 342 MISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHY-------- 393

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
                                    + F + P R     N M+    R G  D+A+    
Sbjct: 394 --------------------FRSMDKLFGIQPERE--HCNCMVDLLGRAGKLDEAMKFIG 431

Query: 652 QMKLDGPLPDHVTFVGVLSAC 672
           +MK +   PD V +  +L AC
Sbjct: 432 EMKFE---PDSVIWRTLLGAC 449



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 161/343 (46%), Gaps = 43/343 (12%)

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS------------------MNGLMEGR 272
           L+V ++LVS +A+ G    A ++F  M Q+NVVS                  +  L+E R
Sbjct: 107 LFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMR 166

Query: 273 RKG---------------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
           R G                       +H  +I+ GL   V V + L++ Y K G +D  R
Sbjct: 167 RDGVAANSYTFSSVLGACGTPGVLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGR 226

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
            VF  M+  D V WN++I+G  Q+G    A+  F  M+  G +++  +L S L +C  + 
Sbjct: 227 GVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMV 286

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
            + +G+Q+H   LK   D D+ + NALL +Y   G L     +F  M + D +SW+++I 
Sbjct: 287 MLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMIS 344

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNV 490
             A +   V EA+K +  M+  G +PN +T + +L A S   + + G H   +    + +
Sbjct: 345 GLAQNGRSV-EALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGI 403

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
             E    N ++   G+ G++D+  K    M    D V W +++
Sbjct: 404 QPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLL 446



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 160/339 (47%), Gaps = 34/339 (10%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH-KGMSNEACKMFKEMV 78
           +F+ N+L+++Y + G L  A +LF  MP RN VSW  +V+   +  G   EA +   EM 
Sbjct: 107 LFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMR 166

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           R G   N Y   SVL A   CG  G    M  H  ++K     D  V + LI  Y   L 
Sbjct: 167 RDGVAANSYTFSSVLGA---CGTPGVLAAM--HADIIKVGLDSDVFVRSSLIDAYMK-LG 220

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             D  R +F+E+ T DL+ WNSII+ ++Q GD +   +LF RM+  GF      N+ T  
Sbjct: 221 DLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFL----ANQGTLT 276

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           S++ A    V+    + +Q+ A V K     DL + +AL+  + + G    A  +F +M 
Sbjct: 277 SVLRACTGMVM--LEVGRQVHAHVLKYD--RDLILHNALLDMYCKCGCLLDADALFSRMH 332

Query: 259 QKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMVAVGN---------GLVNMYAKCGTID 308
            ++V+S + ++ G  + G+ V    +    FD++             G++   +  G ++
Sbjct: 333 DRDVISWSTMISGLAQNGRSVEALKV----FDLMKAEGPTPNNITMVGVLFACSHAGLVE 388

Query: 309 DSRSVFR-----FMIGKDSVSWNTMISGLDQNGCYEEAI 342
           D    FR     F I  +    N M+  L + G  +EA+
Sbjct: 389 DGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAM 427



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 128/252 (50%), Gaps = 12/252 (4%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  I+K G   DVF+ ++LI+ Y+++GDL S   +FDEM   + V W  I++G+   G 
Sbjct: 193 MHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGD 252

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
              A ++F  M  +GFL N+  L SVLRAC   G    + G QVH  VLK ++  D ++ 
Sbjct: 253 GVGAMELFMRMKESGFLANQGTLTSVLRACT--GMVMLEVGRQVHAHVLKYDR--DLILH 308

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+ MY  C    D A  +F  +  RD+ISW+++IS  +Q G ++   K+F  M+ EG 
Sbjct: 309 NALLDMYCKCGCLLD-ADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEG- 366

Query: 187 RYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
                PN  T  G L   +++ ++   +      +M K  G+  +    + +V    R G
Sbjct: 367 ---PTPNNITMVGVLFACSHAGLVEDGW--HYFRSMDKLFGIQPEREHCNCMVDLLGRAG 421

Query: 246 NFYYARKIFEQM 257
               A K   +M
Sbjct: 422 KLDEAMKFIGEM 433


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/676 (36%), Positives = 385/676 (56%), Gaps = 22/676 (3%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+ +H + I +GL   + V   L++MY KC  + D+  +F  M  +D V+WN M++G   
Sbjct: 144 GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAH 203

Query: 335 NGCYEEAIMNFCAMRRD--GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD- 391
           +G Y  A+ +  +M+     L  +  +L++ L   A  G +  G  +H   ++  L  + 
Sbjct: 204 HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNR 263

Query: 392 ---------VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
                    V +  ALL +YA  G L    +VF  MP  ++V+W+++IG F     + ++
Sbjct: 264 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRM-TQ 322

Query: 443 AVKYYLDMRRAGW---SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
           A   +  M   G    SP  +   + L A +S    ++G Q+HA + K  V  + T  N+
Sbjct: 323 AFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNS 380

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           LLS Y K G +D    +F  M+ + D VS+++++SGY+ N    +A  +   M       
Sbjct: 381 LLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEP 439

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           D  T  +++ AC+ +A L+ G   H   +   L  +  I +AL+DMY+KCGRID + + F
Sbjct: 440 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 499

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           ++MP R++ SWN+MI+GY  HG G +A  LF +M   G  PD VTF+ +LSACSH+GLV 
Sbjct: 500 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 559

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           EG   F  M   YGL P++E + CMVDLL R G LD+  EFI  MP+  +  +W  +LGA
Sbjct: 560 EGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 619

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKK 799
           C     +  +LG+K + M+ E+ P+   N+VLL+N+Y++ G++++ A+ R   K    KK
Sbjct: 620 C--RVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKK 677

Query: 800 EAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES 859
             GCSW+ +   +H FV GD+SHP+   IY +L  +   ++  GY P T F L DLE E 
Sbjct: 678 SPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEE 737

Query: 860 KEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSN 918
           KE  +  HSEK+A+A+ +L+ +    I + KNLRVCGDCH+  K IS +  R I++RD+N
Sbjct: 738 KEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDAN 797

Query: 919 RFHHFNDGKCSCGDYW 934
           RFHHF +G+CSCGD+W
Sbjct: 798 RFHHFKNGQCSCGDFW 813



 Score =  202 bits (515), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 257/557 (46%), Gaps = 59/557 (10%)

Query: 30  YVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEA--CKMFKEMVRAGFLLNRY 87
           ++  G L+ A  LFD++P  +  ++  ++  Y+    +  A    +++ M+R     N Y
Sbjct: 67  HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126

Query: 88  ALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIF 147
                L+AC     +    G  +H   + +    D  VS  L+ MY  C    D A  IF
Sbjct: 127 TFPFALKACSAL--ADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAH-IF 183

Query: 148 EEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAY 205
             +  RDL++WN++++ Y+  G           MQ +  R  L+PN  T  +L+   A  
Sbjct: 184 ATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR--LRPNASTLVALLPLLAQQ 241

Query: 206 SSVLSGS----YLLQQILAMVK--KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
            ++  G+    Y ++  L   +  K+ L   + +G+AL+  +A+ G+  YAR++F+ M  
Sbjct: 242 GALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPA 301

Query: 260 KNVVSMNGLMEG------------------------------------------RRKGKE 277
           +N V+ + L+ G                                           R G++
Sbjct: 302 RNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQ 361

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +H  L +SG+   +  GN L++MYAK G ID + ++F  M  KD+VS++ ++SG  QNG 
Sbjct: 362 LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR 421

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
            EEA + F  M+   +     +++S + +C+ L  +  G+  HG  +  GL S+ S+ NA
Sbjct: 422 AEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA 481

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+ +YA  G +    +VF +MP  D VSWN++I  +     L  EA   +L+M   G+ P
Sbjct: 482 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYG-IHGLGKEATALFLEMNNLGFPP 540

Query: 458 NGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           +GVTFI +L+A S   +   G H  H     Y +         ++    + G +D+  + 
Sbjct: 541 DGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEF 600

Query: 517 FARMSERRDEVSWNSMI 533
              M  R D   W +++
Sbjct: 601 IQSMPLRADVRVWVALL 617



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 233/495 (47%), Gaps = 28/495 (5%)

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLIS 362
           G +  +  +F  +   D  ++N +I     +     A  +  +  M R  +  +N++   
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
            L +C++L     G+ IH   +  GL +D+ VS ALL +Y     L     +F  MP  D
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRA--GWSPNGVTFINILAAASSFSMGKLGHQ 480
            V+WN+++  +A    +   AV + L M+       PN  T + +L   +       G  
Sbjct: 191 LVAWNAMLAGYAH-HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249

Query: 481 VHAQVI----------KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
           VHA  I          K  + +   +  ALL  Y KCG +    ++F  M   R+EV+W+
Sbjct: 250 VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPA-RNEVTWS 308

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASVATLERGMEVHACGVR 589
           ++I G++    + +A  L   M+ +G   L   + A+ L ACAS+  L  G ++HA   +
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAK 368

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
           + +  D+  G++L+ MY+K G ID A   FD M V++  S+++++SGY ++G  ++A  +
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 428

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           F +M+     PD  T V ++ ACSH   +  G     S+  + GL  +    + ++D+  
Sbjct: 429 FKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGLASETSICNALIDMYA 487

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME----PQN 765
           + G +D   +  N MP + + + W T++     A      LG++A  +  EM     P +
Sbjct: 488 KCGRIDLSRQVFNMMP-SRDIVSWNTMI-----AGYGIHGLGKEATALFLEMNNLGFPPD 541

Query: 766 AVNYVLLANMYASGG 780
            V ++ L +  +  G
Sbjct: 542 GVTFICLLSACSHSG 556



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 212/483 (43%), Gaps = 63/483 (13%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H   +  G   D+F+   L+++YV+   L  A+ +F  MP R+ V+W  +++GY H 
Sbjct: 145 RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 204

Query: 65  GMSNEACKMFKEMVRAGFLL--NRYALGSVLRACQECGPSGFKFGMQVHCLVLKS----- 117
           GM + A      M      L  N   L ++L    + G      G  VH   +++     
Sbjct: 205 GMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQG--ALAQGTSVHAYCIRACLHPN 262

Query: 118 ----NQTFDG-LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTI 172
               ++  DG L+   L+ MY  C  S   ARR+F+ +  R+ ++W+++I  +       
Sbjct: 263 RNSKSKLTDGVLLGTALLDMYAKC-GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMT 321

Query: 173 SVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLY 232
             F LF  M  +G  + L P          A+   +  G    +Q+ A++ K+G+ +DL 
Sbjct: 322 QAFLLFKAMLAQGLCF-LSPTSIASALRACASLDHLRMG----EQLHALLAKSGVHADLT 376

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR-------------------- 272
            G++L+S +A+ G    A  +F++M  K+ VS + L+ G                     
Sbjct: 377 AGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACN 436

Query: 273 ---------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
                                + G+  HG +I  GL    ++ N L++MYAKCG ID SR
Sbjct: 437 VEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSR 496

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
            VF  M  +D VSWNTMI+G   +G  +EA   F  M   G      + I  LS+C+  G
Sbjct: 497 QVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSG 556

Query: 372 WIMLGQQ-IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSV 429
            ++ G+   H  G   GL   +     ++ L +  G+L    +    MP    V  W ++
Sbjct: 557 LVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVAL 616

Query: 430 IGA 432
           +GA
Sbjct: 617 LGA 619



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 161/342 (47%), Gaps = 28/342 (8%)

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS-EAVKYYLDMRRAGWSPNGVTFI 463
           +G+LSR   +F  +P  D  ++N +I A++ S    + + +  Y  M R   +PN  TF 
Sbjct: 70  SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
             L A S+ +    G  +H   I   +  +  +  ALL  Y KC  + D   IFA M   
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPA- 188

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL--DHFTFATVLSACASVATLERGM 581
           RD V+WN+M++GY H+ +   A+  +  M  +  RL  +  T   +L   A    L +G 
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 248

Query: 582 EVHACGVRACLEFD----------VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
            VHA  +RACL  +          V++G+AL+DMY+KCG + YA R FD MP RN  +W+
Sbjct: 249 SVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWS 308

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGP-LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           ++I G+       +A  LF  M   G       +    L AC+          H +   Q
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACA-------SLDHLRMGEQ 361

Query: 691 VYGLIPQ------LEQFSCMVDLLGRAGELDKIEEFINKMPI 726
           ++ L+ +      L   + ++ +  +AG +D+     ++M +
Sbjct: 362 LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 403


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 252/635 (39%), Positives = 367/635 (57%), Gaps = 29/635 (4%)

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF--SLISTLSSCASLGWIMLGQQIHG 381
           SW   I      G +  AI  F  MR      S+   SL + L SCA LG   L   +H 
Sbjct: 14  SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73

Query: 382 EGLKLGLDSDVSVSNALLSL---------------------YADAGYLSRCLKVFFLMPE 420
             ++ G  +D   +NALL+L                        A Y S   KVF  M E
Sbjct: 74  LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESM-RKVFDEMLE 132

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            D VSWN++I   A+ +    EA+    +M R G+ P+  T   +L   +  +  K G  
Sbjct: 133 RDAVSWNTLILGCAEHKRH-QEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMV 191

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           VH   IK    N+  + ++L+  Y  C +MD   K+F   S+  D V WNSM++GY  N 
Sbjct: 192 VHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDC-DAVLWNSMLAGYAQNG 250

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
            + +A+ +   M+Q G R    TF++++ A  +++ L  G ++HA  +RA    ++ I S
Sbjct: 251 SVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISS 310

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           +L+DMY KCG +D A R F+ +   ++ SW +MI GYA HG   +A  LF +M+L    P
Sbjct: 311 SLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKP 370

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           +H+TF+ VL+ACSHAGLVD G+K+F SMS  YG +P LE  + + D LGRAG+LD+   F
Sbjct: 371 NHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNF 430

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           I++M I P S +W T+L A CR + + T L  + A  +FE+EP++  ++V+L+NMY++ G
Sbjct: 431 ISEMKIKPTSSVWSTLLRA-CRVH-KNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASG 488

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
           +W + A+ RK+M+   +KKE  CSW+ +K+ +HVF+A D+SHP  D I + L   +++M 
Sbjct: 489 RWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMI 548

Query: 841 DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHS 899
             GYVP  +  L D+E E K +++  HSEK+A+ F +++      IR+MKNLRVC DCH 
Sbjct: 549 RQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHI 608

Query: 900 AFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           A KFISKIV REIV+RD NRFH F DG CSCGD+W
Sbjct: 609 ATKFISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 188/389 (48%), Gaps = 32/389 (8%)

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKC-------GTIDDS-------------RSVFRFM 317
           +H   IRSG F      N L+N+  K        GT   S             R VF  M
Sbjct: 71  LHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEM 130

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
           + +D+VSWNT+I G  ++  ++EA+     M RDG M   F+L + L   A    I  G 
Sbjct: 131 LERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGM 190

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
            +HG  +K G D+DV V ++L+ +YA+   +   +KVF    + D V WNS++  +A + 
Sbjct: 191 VVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNG 250

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
           + V EA+  +  M +AG  P  VTF +++ A  + S+ +LG Q+HA +I+    +   I 
Sbjct: 251 S-VEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFIS 309

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ 557
           ++L+  Y KCG +D   ++F  + +  D VSW +MI GY  +    +A  L   M     
Sbjct: 310 SSLIDMYCKCGNVDIARRVFNGI-QSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNV 368

Query: 558 RLDHFTFATVLSACASVATLERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRI 612
           + +H TF  VL+AC+    ++ G +      +  G    LE      +AL D   + G +
Sbjct: 369 KPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEH----CAALADTLGRAGDL 424

Query: 613 DYASRFFDLMPVRNVYS-WNSMISGYARH 640
           D A  F   M ++   S W++++     H
Sbjct: 425 DEAYNFISEMKIKPTSSVWSTLLRACRVH 453



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 113/495 (22%), Positives = 208/495 (42%), Gaps = 74/495 (14%)

Query: 157 SWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV-LSGSYLL 215
           SW   I + + +G  +    LF +M     R S+ P      SL  A  S   L    L 
Sbjct: 14  SWAYQIRMAASQGQFLHAISLFLQM-----RASVAPRSSVPASLPAALKSCAGLGLCTLA 68

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA--------------------RKIFE 255
             + A+  ++G  +D +  +AL++   +L  F++                     RK+F+
Sbjct: 69  ASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFD 128

Query: 256 QMIQKNVVSMNGLMEG-----------------------------------------RRK 274
           +M++++ VS N L+ G                                          ++
Sbjct: 129 EMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKR 188

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G  VHGY I++G  + V VG+ L++MYA C  +D S  VF      D+V WN+M++G  Q
Sbjct: 189 GMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQ 248

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG  EEA+  F  M + G+     +  S + +  +L  + LG+Q+H   ++   + ++ +
Sbjct: 249 NGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFI 308

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           S++L+ +Y   G +    +VF  +   D VSW ++I  +A      +EA   +  M    
Sbjct: 309 SSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYA-LHGPTTEAFVLFERMELGN 367

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
             PN +TF+ +L A S   +   G +  ++   +Y          AL    G+ G++D+ 
Sbjct: 368 VKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEA 427

Query: 514 EKIFARMSERRDEVSWNSMISG-YIH-NELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
               + M  +     W++++    +H N +L + +    F ++      H   + + SA 
Sbjct: 428 YNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSAS 487

Query: 572 A---SVATLERGMEV 583
                 A L + M +
Sbjct: 488 GRWNEAAQLRKSMRI 502



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 152/313 (48%), Gaps = 34/313 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRV---------------GDLASAS-----KLF 43
           A   H   ++ G   D F  N L+N+ +++               G L SA+     K+F
Sbjct: 68  AASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVF 127

Query: 44  DEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSG 103
           DEM +R++VSW  ++ G        EA  M +EM R GF+ + + L +VL    EC  + 
Sbjct: 128 DEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAEC--AD 185

Query: 104 FKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS 163
            K GM VH   +K+    D  V + LI MY +C +  D + ++F+     D + WNS+++
Sbjct: 186 IKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQ-MDYSMKVFDSFSDCDAVLWNSMLA 244

Query: 164 VYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVK 223
            Y+Q G       +F RM + G R    P   TF SLI A  +  LS   L +Q+ A + 
Sbjct: 245 GYAQNGSVEEALGIFRRMLQAGVR----PVPVTFSSLIPAFGN--LSLLRLGKQLHAYLI 298

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLI 283
           +A    ++++ S+L+  + + GN   AR++F  +   ++VS   ++     G  +HG   
Sbjct: 299 RARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMI----MGYALHGPTT 354

Query: 284 RS-GLFDMVAVGN 295
            +  LF+ + +GN
Sbjct: 355 EAFVLFERMELGN 367



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 158/323 (48%), Gaps = 16/323 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K   + H   +K+GF  DVF+ ++LI++Y     +  + K+FD   D ++V W  +++GY
Sbjct: 187 KRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGY 246

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   EA  +F+ M++AG         S++ A      S  + G Q+H  ++++    
Sbjct: 247 AQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNL--SLLRLGKQLHAYLIRARFND 304

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  +S+ LI MY  C  + D ARR+F  I++ D++SW ++I  Y+  G T   F LF RM
Sbjct: 305 NIFISSSLIDMYCKC-GNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERM 363

Query: 182 QREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           +      ++KPN  TF +++TA +++ ++   +  +   +M  + G +  L   +AL   
Sbjct: 364 ELG----NVKPNHITFLAVLTACSHAGLVDNGW--KYFNSMSNQYGFVPSLEHCAALADT 417

Query: 241 FARLGNFYYARKIFEQMIQKNVVSM-NGLMEGRRKGKE-VHGYLIRSGLFDMVAVGNG-- 296
             R G+   A     +M  K   S+ + L+   R  K  V    +   +F++     G  
Sbjct: 418 LGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSH 477

Query: 297 --LVNMYAKCGTIDDSRSVFRFM 317
             L NMY+  G  +++  + + M
Sbjct: 478 VILSNMYSASGRWNEAAQLRKSM 500


>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
          Length = 1021

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 271/883 (30%), Positives = 456/883 (51%), Gaps = 90/883 (10%)

Query: 8    HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
            H  +LK GF   VF    L+++Y + G++  A ++FD +   +++ W  +++GY   G  
Sbjct: 180  HCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRY 239

Query: 68   NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
             +A  +F  M + G + +                       QV C+ + S     G + +
Sbjct: 240  QQALALFSRMEKMGSVPD-----------------------QVTCVTIISTLASMGRLGD 276

Query: 128  VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
                           AR + + I     ++WN++I+ YSQ G    VF L+  M+++G  
Sbjct: 277  ---------------ARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQG-- 319

Query: 188  YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
              L P   TF S+++AA +  ++     +QI A   K GL ++++VGS+L++ + + G  
Sbjct: 320  --LMPTRSTFASILSAAAN--MTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCI 375

Query: 248  YYARKIFEQMIQKNVVSMNGLMEG-----------------RRK---------------- 274
              A+K+F+   +KN+V  N ++ G                 RR                 
Sbjct: 376  SDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGAC 435

Query: 275  --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                    G++VH   I++G+   + V N +++MY+K G ID ++++F  +  KDSVSWN
Sbjct: 436  INLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWN 495

Query: 327  TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
             +I GL  N    EAI     M+  G+     S  + +++C+++  I  G+QIH   +K 
Sbjct: 496  ALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKY 555

Query: 387  GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
             + S+ +V ++L+ LY+  G +    KV   +     V  N++I     +     EA++ 
Sbjct: 556  NVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNR-EDEAIEL 614

Query: 447  YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE-TTIENALLSCYG 505
            +  + + G+ P+  TF +IL+  +      +G QVH   +K  + N+ T++  +L+  Y 
Sbjct: 615  FQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYL 674

Query: 506  KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
            KC  ++D  K+   + + ++ V W + ISGY  N    +++ + W M     R D  TF 
Sbjct: 675  KCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFT 734

Query: 566  TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF-DLMPV 624
            +VL AC+ +A L  G E+H   V++         SAL+DMYSKCG +  +   F +L   
Sbjct: 735  SVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNR 794

Query: 625  RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
            +N+  WNSMI G+A++G+ ++AL LF +M+     PD VT +GVL ACSHAGL+ EG   
Sbjct: 795  QNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLHF 854

Query: 685  FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
            F SMSQVYG++P+++ ++C++DLLGR G L K +E I+++P   + +IW T L AC    
Sbjct: 855  FDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLAAC--QM 912

Query: 745  CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
             +  E G+ AA  L EMEPQ++  YV L++++A+ G W +   AR+AM+E  V K  GCS
Sbjct: 913  HKDEERGKVAAKKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCS 972

Query: 805  WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQ 847
            W+T+ +   VFV  D  HP+   IY+ L +L   M   G + +
Sbjct: 973  WITVGNKQSVFVVQDTHHPDALSIYKMLDDLTGMMNKDGRIKE 1015



 Score =  288 bits (738), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 210/747 (28%), Positives = 375/747 (50%), Gaps = 36/747 (4%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD--EMPDRNSVSWACIVSGYTH 63
           + H +IL+ G      L + L+++Y R G +  A +          +S + + ++S +  
Sbjct: 74  VLHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHAR 133

Query: 64  KGMSNEACKMFKEM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            G   +    F+ +    G   +++ +  VL AC   G    + G QVHC VLKS     
Sbjct: 134 SGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLG--ALEHGRQVHCDVLKSGFCSS 191

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
                 L+ MY  C E  D ARR+F+ I   D I W S+I+ Y + G       LFSRM+
Sbjct: 192 VFCQAGLVDMYAKCGEVDD-ARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRME 250

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           + G      P++ T  ++I     S L+    L     ++K+  + S +   +A+++ ++
Sbjct: 251 KMGS----VPDQVTCVTII-----STLASMGRLGDARTLLKRIRMTSTV-AWNAVIASYS 300

Query: 243 RLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA 292
           + G       +++ M ++          +++S    M    +G+++H   ++ GL   V 
Sbjct: 301 QSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVF 360

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           VG+ L+N+Y K G I D++ VF F   K+ V WN ++ G  QN   EE I  F  MRR  
Sbjct: 361 VGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRAD 420

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
           L + +F+ +S L +C +L  + LG+Q+H   +K G+D+D+ V+NA+L +Y+  G +    
Sbjct: 421 LEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAK 480

Query: 413 KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
            +F L+P  D VSWN++I   A +E    EA+     M+  G + + V+F   + A S+ 
Sbjct: 481 ALFSLIPVKDSVSWNALIVGLAHNEE-EGEAINMLKRMKFYGIALDEVSFATAINACSNI 539

Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
              + G Q+H+  IKYNV +   + ++L+  Y K G+++   K+ A + +    V  N++
Sbjct: 540 WAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHV-DASSIVPINAL 598

Query: 533 ISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR-AC 591
           I+G + N    +A+ L   +++ G +  +FTF ++LS C    +   G +VH   ++ A 
Sbjct: 599 ITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAI 658

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMP-VRNVYSWNSMISGYARHGHGDKALTLF 650
           L  D  +G +LV +Y KC  ++ A++  + +P  +N+  W + ISGYA++G+  ++L +F
Sbjct: 659 LNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMF 718

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
            +M+      D  TF  VL ACS    + +G K    +    G +      S ++D+  +
Sbjct: 719 WRMRSYDVRSDEATFTSVLKACSEMAALTDG-KEIHGLIVKSGFVSYETATSALMDMYSK 777

Query: 711 AGEL----DKIEEFINKMPITP-NSLI 732
            G++    +  +E  N+  I P NS+I
Sbjct: 778 CGDVISSFEIFKELKNRQNIMPWNSMI 804



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 144/580 (24%), Positives = 271/580 (46%), Gaps = 59/580 (10%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H   +KHG   +VF+ ++LIN+YV+ G ++ A K+FD   ++N V W  I+ G+ 
Sbjct: 342 EGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFV 401

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
              +  E  +MF+ M RA    + +   SVL AC          G QVHC+ +K+    D
Sbjct: 402 QNELQEETIQMFQYMRRADLEADDFTFVSVLGAC--INLYSLDLGRQVHCITIKNGMDAD 459

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V+N ++ MY S L + D A+ +F  I  +D +SWN++I   +   +      +  RM+
Sbjct: 460 LFVANAMLDMY-SKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMK 518

Query: 183 REGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
                Y +  +E +F + I A  +  ++ +G    +QI +   K  + S+  VGS+L+  
Sbjct: 519 ----FYGIALDEVSFATAINACSNIWAIETG----KQIHSASIKYNVCSNHAVGSSLIDL 570

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMN----GLMEGRRK---------------------- 274
           +++ G+   +RK+   +   ++V +N    GL++  R+                      
Sbjct: 571 YSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTF 630

Query: 275 ---------------GKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                          GK+VH Y ++S + +   ++G  LV +Y KC  ++D+  +   + 
Sbjct: 631 TSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVP 690

Query: 319 G-KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             K+ V W   ISG  QNG   ++++ F  MR   + S   +  S L +C+ +  +  G+
Sbjct: 691 DHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGK 750

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV-SWNSVIGAFADS 436
           +IHG  +K G  S  + ++AL+ +Y+  G +    ++F  +     +  WNS+I  FA +
Sbjct: 751 EIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKN 810

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETT 495
               +EA+  +  M+ +   P+ VT + +L A S   +   G H   +    Y +     
Sbjct: 811 -GYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVD 869

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
               L+   G+ G +   +++  ++  R D V W + ++ 
Sbjct: 870 HYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLAA 909



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 15/175 (8%)

Query: 575 ATLERGMEVHACGV------RACLEFDVVIGSALVDMYSKCGRIDYASRFFDL---MPVR 625
           A L R  +  ACGV      R  L     +G ALVD+Y + GR+ YA R        P  
Sbjct: 61  AGLHRTHQARACGVLHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPAS 120

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLD-GPLPDHVTFVGVLSACSHAGLVDEGFK- 683
           +  + +S++S +AR G     L  F +++   G  PD      VLSACS  G ++ G + 
Sbjct: 121 SAAA-SSVLSCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQV 179

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
           H   +    G    +   + +VD+  + GE+D      + +   P+++ W +++ 
Sbjct: 180 HCDVLKS--GFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIA-CPDTICWTSMIA 231


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/699 (35%), Positives = 385/699 (55%), Gaps = 41/699 (5%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYA--KCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
           ++ K++H  ++R+GLF      + L+   A     ++D ++ VF  +   +  +WNT+I 
Sbjct: 49  KQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIR 108

Query: 331 GLDQNGCYEEAIMNFCAM-RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
               +    ++++ F  M  +       F+    + + + L  +  G+  HG  +K+ L 
Sbjct: 109 AYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLG 168

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           SDV + N+L+  YA  G L    +VF  +P  D VSWNS+I AF        EA++ + +
Sbjct: 169 SDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQG-GCPEEALELFQE 227

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M      PNG+T + +L+A +  S  + G  VH+ + +  +    T+ NA+L  Y KCG 
Sbjct: 228 METQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGS 287

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIH----------------------NELL----- 542
           ++D +++F +M E+ D VSW +M+ GY                        N L+     
Sbjct: 288 VEDAKRLFDKMPEK-DIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQ 346

Query: 543 ---PKAMNLVWFMMQ--RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
              PK    ++  +Q  +  + D  T  + LSACA +  ++ G  +H    +  ++ +  
Sbjct: 347 CGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCH 406

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           + ++L+DMY KCG +  A   F  +  ++V+ W++MI+G A HGHG  A+ LFS+M+ D 
Sbjct: 407 LTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDK 466

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
             P+ VTF  +L ACSH GLV+EG   F  M  VYG++P ++ ++CMVD+LGRAG L++ 
Sbjct: 467 VKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEA 526

Query: 718 EEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYA 777
            E I KMP+ P + +W  +LGAC         L  +A + L E+EP N   YVLL+N+YA
Sbjct: 527 VELIEKMPMAPAASVWGALLGACTIH--ENVVLAEQACSQLIELEPGNHGAYVLLSNIYA 584

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
             GKW+ V+  RK M++  +KKE GCS + +   VH F+ GD SHP    IY KL E+  
Sbjct: 585 KAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVA 644

Query: 838 KMRDAGYVPQTKFALFDLEPES-KEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCG 895
           ++   GYVP     L  +E E  KE  +  HSEK+A+AF +++     PIRI+KNLRVCG
Sbjct: 645 RLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCG 704

Query: 896 DCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           DCHS  K +SK+  REI+LRD  RFHHF +G CSC DYW
Sbjct: 705 DCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 127/538 (23%), Positives = 241/538 (44%), Gaps = 44/538 (8%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYV--RVGDLASASKLFDEMPDRNSVSWACIV 58
           +K  K  H Q+L+ G  +D F  + LI          L  A ++FD++P  N  +W  ++
Sbjct: 48  TKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLI 107

Query: 59  SGYTHKGMSNEACKMFKEMV-RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
             Y      +++  +F  M+ ++    +++    +++A  E        G   H +V+K 
Sbjct: 108 RAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASEL--EELFTGKAFHGMVIKV 165

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
               D  + N LI  Y  C E      R+F  I  RD++SWNS+I+ + Q G      +L
Sbjct: 166 LLGSDVFILNSLIHFYAKCGE-LGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALEL 224

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F  M+ +    ++KPN  T   +++A      S     + + + +++  +   L + +A+
Sbjct: 225 FQEMETQ----NVKPNGITMVGVLSACAKK--SDFEFGRWVHSYIERNRIGESLTLSNAM 278

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGL 297
           +  + + G+   A+++F++M +K++VS   ++ G                          
Sbjct: 279 LDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVG-------------------------- 312

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
              YAK G  D ++ +F  M  +D  +WN +IS  +Q G  +EA+  F  ++       +
Sbjct: 313 ---YAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPD 369

Query: 358 -FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
             +L+STLS+CA LG + LG  IH    K G+  +  ++ +L+ +Y   G L + L VF 
Sbjct: 370 EVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFH 429

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            +   D   W+++I   A       +A+  +  M+     PN VTF NIL A S   + +
Sbjct: 430 SVERKDVFVWSAMIAGLA-MHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVE 488

Query: 477 LGHQVHAQV-IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            G     Q+ + Y V         ++   G+ G +++  ++  +M        W +++
Sbjct: 489 EGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALL 546



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/529 (23%), Positives = 236/529 (44%), Gaps = 59/529 (11%)

Query: 159 NSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQI 218
           +  +S+  Q  +T  + ++ ++M R G  +    + ++   LITAA  S        QQ+
Sbjct: 36  HPTLSLIDQCSETKQLKQIHAQMLRTGLFF----DPFSASRLITAAALSPFPSLDYAQQV 91

Query: 219 LAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN-----------VVSMNG 267
              +       +LY  + L+  +A   N + +  IF +M+ ++           ++    
Sbjct: 92  FDQIPH----PNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAAS 147

Query: 268 LMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
            +E    GK  HG +I+  L   V + N L++ YAKCG +     VF  +  +D VSWN+
Sbjct: 148 ELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNS 207

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           MI+   Q GC EEA+  F  M    +  +  +++  LS+CA       G+ +H    +  
Sbjct: 208 MITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNR 267

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS----------- 436
           +   +++SNA+L +Y   G +    ++F  MPE D VSW +++  +A             
Sbjct: 268 IGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFD 327

Query: 437 ----------EALVS---------EAVKYYLDMRRAGWS-PNGVTFINILAAASSFSMGK 476
                      AL+S         EA++ + +++ +  + P+ VT ++ L+A +      
Sbjct: 328 AMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMD 387

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY 536
           LG  +H  + K  +     +  +L+  Y KCG++     +F  + ER+D   W++MI+G 
Sbjct: 388 LGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSV-ERKDVFVWSAMIAGL 446

Query: 537 IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
             +     A+ L   M +   + +  TF  +L AC+ V  +E G        +  L + V
Sbjct: 447 AMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFN---QMELVYGV 503

Query: 597 VIG----SALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYARH 640
           + G    + +VD+  + G ++ A    + MP+    S W +++     H
Sbjct: 504 LPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIH 552



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 202/449 (44%), Gaps = 61/449 (13%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K FH  ++K     DVF+ N+LI+ Y + G+L    ++F  +P R+ VSW  +++ +   
Sbjct: 156 KAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQG 215

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   EA ++F+EM       N   +  VL AC +   S F+FG  VH  + ++       
Sbjct: 216 GCPEEALELFQEMETQNVKPNGITMVGVLSACAK--KSDFEFGRWVHSYIERNRIGESLT 273

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           +SN ++ MY  C  S + A+R+F+++  +D++SW +++  Y++ G+  +   +F  M   
Sbjct: 274 LSNAMLDMYTKC-GSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAM--- 329

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                  PN+                                   D+   +AL+S + + 
Sbjct: 330 -------PNQ-----------------------------------DIAAWNALISAYEQC 347

Query: 245 GNFYYARKIFEQM-----IQKNVVSMNGLMEGRRK------GKEVHGYLIRSGLFDMVAV 293
           G    A ++F ++      + + V++   +    +      G  +H Y+ + G+     +
Sbjct: 348 GKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHL 407

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
              L++MY KCG +  +  VF  +  KD   W+ MI+GL  +G  ++AI  F  M+ D +
Sbjct: 408 TTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKV 467

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGE-GLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
             +  +  + L +C+ +G +  G+    +  L  G+   V     ++ +   AG L   +
Sbjct: 468 KPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAV 527

Query: 413 KVFFLMPEHDQVS-WNSVIGAFADSEALV 440
           ++   MP     S W +++GA    E +V
Sbjct: 528 ELIEKMPMAPAASVWGALLGACTIHENVV 556



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 133/308 (43%), Gaps = 19/308 (6%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM- 77
           D+    T++  Y ++G+  +A  +FD MP+++  +W  ++S Y   G   EA ++F E+ 
Sbjct: 302 DIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQ 361

Query: 78  VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
           +      +   L S L AC + G      G  +H  + K     +  ++  LI MY  C 
Sbjct: 362 LSKTAKPDEVTLVSTLSACAQLG--AMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCG 419

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
           +    A  +F  +E +D+  W+++I+  +  G       LFS+MQ +     +KPN  TF
Sbjct: 420 DLQK-ALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQED----KVKPNAVTF 474

Query: 198 GSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
            +++ A      V  G     Q   M    G+L  +   + +V    R G    A ++ E
Sbjct: 475 TNILCACSHVGLVEEGRTFFNQ---MELVYGVLPGVKHYACMVDILGRAGLLEEAVELIE 531

Query: 256 QMIQKNVVSMNGLMEGRRKGKE--VHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDD 309
           +M      S+ G + G     E  V      S L ++    +G    L N+YAK G  D 
Sbjct: 532 KMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDR 591

Query: 310 SRSVFRFM 317
              + + M
Sbjct: 592 VSGLRKLM 599


>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 245/668 (36%), Positives = 392/668 (58%), Gaps = 12/668 (1%)

Query: 275 GKEVHG-YLIRSGLFDMVAVG--NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
           GK +H  +LIR+   +   +   N LV++Y KCG +  +R++F  M  ++ VSWN +++G
Sbjct: 31  GKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAG 90

Query: 332 LDQNGCYEEAIMNFCAM-RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
               G + E ++ F  M        + +   + LS+C+  G +  G Q HG   K GL  
Sbjct: 91  YLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVC 150

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMP-EH--DQVSWNSVIGAFADSEALVSEAVKYY 447
              V +AL+ +Y+   ++   L+V   +P EH  D  S+NSV+ A  +S     EAV+  
Sbjct: 151 HQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVES-GRGEEAVEVL 209

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
             M     + + VT++ ++   +     +LG +VHA++++  +  +  + + L+  YGKC
Sbjct: 210 RRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKC 269

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
           GE+ +   +F  + + R+ V W ++++ Y+ N    +++NL   M + G   + +TFA +
Sbjct: 270 GEVLNARNVFDGL-QNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVL 328

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           L+ACA +A L  G  +HA   +   +  V++ +AL++MYSK G ID +   F  M  R++
Sbjct: 329 LNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDI 388

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            +WN+MI GY+ HG G +AL +F  M      P++VTF+GVLSA SH GLV EGF +   
Sbjct: 389 ITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNH 448

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           + + + + P LE ++CMV LL RAG LD+ E F+    +  + + WRT+L AC     R 
Sbjct: 449 LMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVH--RN 506

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
            +LGR+ A  + +M+P +   Y LL+NMYA   +W+ V   RK M+E  +KKE G SW+ 
Sbjct: 507 YDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLD 566

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
           +++ +HVF++   +HPE   IY+K+++L   ++  GYVP     L D+E E KE  +SYH
Sbjct: 567 IRNDIHVFLSEGSNHPESIQIYKKVQQLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYH 626

Query: 868 SEKIAVAFVLTR-NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SEK+A+A+ L +  S  PIRI+KNLR+C DCH+A K ISK+  R I++RD+NRFHHF DG
Sbjct: 627 SEKLALAYGLMKIPSPAPIRIIKNLRMCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDG 686

Query: 927 KCSCGDYW 934
            C+C D+W
Sbjct: 687 SCTCLDHW 694



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 181/375 (48%), Gaps = 10/375 (2%)

Query: 367 CASLGWIMLGQQIHGEGL---KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           CA + W+  G+ +H + L   +    S +S  N+L+ LY   G L     +F  MP  + 
Sbjct: 22  CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSWN ++  +      +   V +   +      PN   F   L+A S     K G Q H 
Sbjct: 82  VSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHG 141

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR--DEVSWNSMISGYIHNEL 541
            + K+ +     +++AL+  Y +C  ++   ++   +      D  S+NS+++  + +  
Sbjct: 142 LLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGR 201

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +A+ ++  M+      DH T+  V+  CA +  L+ G+ VHA  +R  L FD  +GS 
Sbjct: 202 GEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSM 261

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+DMY KCG +  A   FD +  RNV  W ++++ Y ++G+ +++L LF+ M  +G LP+
Sbjct: 262 LIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPN 321

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK----I 717
             TF  +L+AC+    +  G     +  +  G    +   + ++++  ++G +D      
Sbjct: 322 EYTFAVLLNACAGIAALRHG-DLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVF 380

Query: 718 EEFINKMPITPNSLI 732
            + I +  IT N++I
Sbjct: 381 TDMIYRDIITWNAMI 395



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 176/398 (44%), Gaps = 54/398 (13%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR-AGF 82
           N+L+++YV+ G L  A  LFD MP RN VSW  +++GY H G   E   +FK MV     
Sbjct: 54  NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113

Query: 83  LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC 142
             N Y   + L AC   G    K GMQ H L+ K        V + L+ MY  C    + 
Sbjct: 114 CPNEYVFTTALSACSHGGR--VKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRC-SHVEL 170

Query: 143 ARRIFEEI---ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
           A ++ + +      D+ S+NS+++   + G      ++  RM  E   +    +  T+  
Sbjct: 171 ALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAW----DHVTYVG 226

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           ++     + +    L  ++ A + + GL+ D +VGS L+  + + G    AR +F+ +  
Sbjct: 227 VM--GLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQN 284

Query: 260 KNVVSMNGLM---------------------EGR--------------------RKGKEV 278
           +NVV    LM                     EG                     R G  +
Sbjct: 285 RNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLL 344

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H  + + G  + V V N L+NMY+K G+ID S +VF  MI +D ++WN MI G   +G  
Sbjct: 345 HARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLG 404

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           ++A+  F  M       +  + I  LS+ + LG +  G
Sbjct: 405 KQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEG 442



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 114/242 (47%), Gaps = 27/242 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H ++L+ G  +D F+ + LI++Y + G++ +A  +FD + +RN V W  +++ Y   G  
Sbjct: 244 HARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYF 303

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            E+  +F  M R G L N Y    +L AC   G +  + G  +H  V K       +V N
Sbjct: 304 EESLNLFTCMDREGTLPNEYTFAVLLNAC--AGIAALRHGDLLHARVEKLGFKNHVIVRN 361

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI MY     S D +  +F ++  RD+I+WN++I  YS  G      ++F  M      
Sbjct: 362 ALINMYSKS-GSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDM----VS 416

Query: 188 YSLKPNEYTFGSLITAAYSS---VLSGSYLLQQIL----------------AMVKKAGLL 228
               PN  TF  +++ AYS    V  G Y L  ++                A++ +AGLL
Sbjct: 417 AEECPNYVTFIGVLS-AYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLL 475

Query: 229 SD 230
            +
Sbjct: 476 DE 477



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 2/107 (1%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +   L H ++ K GF   V + N LIN+Y + G + S+  +F +M  R+ ++W  ++ GY
Sbjct: 339 RHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGY 398

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKF 106
           +H G+  +A ++F++MV A    N      VL A    G    GF +
Sbjct: 399 SHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYY 445


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/575 (39%), Positives = 360/575 (62%), Gaps = 8/575 (1%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S +++CA    +   + IH           V + N+L+ LY   G ++   +VF  MP  
Sbjct: 69  SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D  SW S+I  +A ++ +  EA+     M R  + PNG TF ++L AA + +   +G Q+
Sbjct: 129 DMCSWTSLIAGYAQND-MPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQI 187

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           HA  +KY+  ++  + +ALL  Y +CG MD    +F ++ E ++ VSWN++I+G+     
Sbjct: 188 HALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQL-ESKNGVSWNALIAGFARKGD 246

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
               + +   M + G    HFT+++V SA A +  LE+G  VHA  +++       +G+ 
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNT 306

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           ++DMY+K G +  A + FD +  ++V +WNSM++ +A++G G +A+T F +M+  G   +
Sbjct: 307 ILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLN 366

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            +TF+ +L+ACSH GLV EG ++F  M + Y L P+++ +  +VDLLGRAG L+    FI
Sbjct: 367 QITFLSILTACSHGGLVKEGKQYFDMMKE-YNLEPEIDHYVTVVDLLGRAGLLNDALVFI 425

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
            KMP+ P + +W  +LG+C R + +  ++G+ AA+ +FE++P +    VLL N+YAS G+
Sbjct: 426 FKMPMKPTAAVWGALLGSC-RMH-KNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQ 483

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           W+  A+ RK MK   VKKE  CSWV +++ VH+FVA D++HP  + IY+K +E++ ++R 
Sbjct: 484 WDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRK 543

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKL--PIRIMKNLRVCGDCHS 899
           AGYVP T + L  ++ + ++  + YHSEKIA+AF L  N  L   IRIMKN+R+CGDCHS
Sbjct: 544 AGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALI-NMPLGATIRIMKNIRICGDCHS 602

Query: 900 AFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           AF++ISK+  REIV+RD+NRFHHF+ G CSCGDYW
Sbjct: 603 AFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 180/370 (48%), Gaps = 9/370 (2%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            + +H +L  S     V + N L+++Y KCG + D+R VF  M  +D  SW ++I+G  Q
Sbjct: 83  ARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQ 142

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N   +EA+     M R     + F+  S L +  +     +G+QIH   +K     DV V
Sbjct: 143 NDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYV 202

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA---DSEALVSEAVKYYLDMR 451
            +ALL +YA  G +   + VF  +   + VSWN++I  FA   D E      +  + +M+
Sbjct: 203 GSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET----TLLMFAEMQ 258

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
           R G+     T+ ++ +A +     + G  VHA +IK        + N +L  Y K G M 
Sbjct: 259 RNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMI 318

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
           D  K+F R+ +++D V+WNSM++ +    L  +A+     M + G  L+  TF ++L+AC
Sbjct: 319 DARKVFDRV-DKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTAC 377

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-W 630
           +    ++ G +         LE ++     +VD+  + G ++ A  F   MP++   + W
Sbjct: 378 SHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVW 437

Query: 631 NSMISGYARH 640
            +++     H
Sbjct: 438 GALLGSCRMH 447



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 208/434 (47%), Gaps = 76/434 (17%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           DA+  H  +    FA  VFL N+LI++Y + G +A A ++FD MP R+  SW  +++GY 
Sbjct: 82  DARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYA 141

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
              M +EA  +   M+R  F  N +   S+L+A      SG   G Q+H L +K +   D
Sbjct: 142 QNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSG--IGEQIHALTVKYDWHDD 199

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V + L+ MY  C    D A  +F+++E+++ +SWN++I+ ++++GD  +   +F+ MQ
Sbjct: 200 VYVGSALLDMYARC-GRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQ 258

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVGSALVS 239
           R GF    +   +T+ S+ +A     ++G   L+Q   + A + K+G     +VG+ ++ 
Sbjct: 259 RNGF----EATHFTYSSVFSA-----IAGIGALEQGKWVHAHMIKSGERLSAFVGNTILD 309

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVN 299
            +A+ G+   ARK+F+++ +K+VV+ N ++                              
Sbjct: 310 MYAKSGSMIDARKVFDRVDKKDVVTWNSMLTA---------------------------- 341

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
            +A+ G            +G+++V+                   +F  MR+ G+  +  +
Sbjct: 342 -FAQYG------------LGREAVT-------------------HFEEMRKCGVHLNQIT 369

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
            +S L++C+  G +  G+Q      +  L+ ++     ++ L   AG L+  L   F MP
Sbjct: 370 FLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMP 429

Query: 420 EHDQVS-WNSVIGA 432
                + W +++G+
Sbjct: 430 MKPTAAVWGALLGS 443



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 2/187 (1%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           + ++++ACA   +L+    +HA    +     V + ++L+ +Y KCG +  A R FD MP
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            R++ SW S+I+GYA++   D+AL L   M      P+  TF  +L A   +     G +
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIG-E 185

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
              +++  Y     +   S ++D+  R G +D      +++  + N + W  ++    R 
Sbjct: 186 QIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE-SKNGVSWNALIAGFARK 244

Query: 744 NCRKTEL 750
              +T L
Sbjct: 245 GDGETTL 251



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 12/121 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K G     F+ NT++++Y + G +  A K+FD +  ++ V+W  +++ +
Sbjct: 283 EQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAF 342

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G+  EA   F+EM + G  LN+    S+L AC   G            LV +  Q F
Sbjct: 343 AQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGG------------LVKEGKQYF 390

Query: 122 D 122
           D
Sbjct: 391 D 391


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 230/574 (40%), Positives = 350/574 (60%), Gaps = 7/574 (1%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L+ C +   +  GQ++H   +K      V +S  L+ LY     L     VF  M E + 
Sbjct: 17  LNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNV 76

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSW ++I  ++      SEA+  ++ M R+   PN  TF  +L++ + FS  +LG Q+H+
Sbjct: 77  VSWTAMISGYSQ-RGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHS 135

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
            + K N  N   + ++LL  Y K G + +   +F  + ER D VS  ++ISGY    L  
Sbjct: 136 HIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPER-DVVSCTAIISGYAQLGLDE 194

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +A+ L   + + G   ++ T+A++L+A + +A L+ G +VH+  +R  L F VV+ ++L+
Sbjct: 195 EALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLI 254

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDH 662
           DMYSKCG ++YA + F+ MPVR V SWN+M+ GY++HG G + + LF  M+ +  + PD 
Sbjct: 255 DMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDS 314

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ-LEQFSCMVDLLGRAGELDKIEEFI 721
           VTF+ VLS CSH GL D+G + F  M      I   +E + C++DLLGRAG +++  E I
Sbjct: 315 VTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELI 374

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
            KMP  P + IW ++LGAC R +   T +G      L E+EP+NA NYV+L+N+YAS G+
Sbjct: 375 KKMPFEPTAAIWGSLLGAC-RVH-SNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGR 432

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           WEDV   R+ M E  V KE G SW+ +   +H F A D SHP ++ ++ K++EL  K ++
Sbjct: 433 WEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKE 492

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSA 900
           +GYVP     L+D++ E KE ++  HSEK+A+AF L   S+ +P+R++KNLR+C DCH+ 
Sbjct: 493 SGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNF 552

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            KF+SK+ GR++ +RD NRFHH   G CSCGDYW
Sbjct: 553 AKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586



 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 184/372 (49%), Gaps = 6/372 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R+G+ VH ++I++     V +   L+ +Y KC  +  +R VF  M  ++ VSW  MISG 
Sbjct: 27  REGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGY 86

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            Q G   EA+  F  M R     + F+  + LSSC       LG+QIH    K   ++ +
Sbjct: 87  SQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHI 146

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V ++LL +YA AG +     VF  +PE D VS  ++I  +A    L  EA++ +  ++R
Sbjct: 147 FVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQL-GLDEEALELFCRLQR 205

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G S N VT+ ++L A S  +    G QVH+ V++  +     ++N+L+  Y KCG ++ 
Sbjct: 206 EGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNY 265

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSAC 571
             KIF  M   R  +SWN+M+ GY  +    + + L   M +  + + D  TF  VLS C
Sbjct: 266 ARKIFNNMP-VRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGC 324

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIG--SALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           +     ++G+E+    +    E +  I     ++D+  + GR++ A      MP     +
Sbjct: 325 SHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAA 384

Query: 630 -WNSMISGYARH 640
            W S++     H
Sbjct: 385 IWGSLLGACRVH 396



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 149/276 (53%), Gaps = 15/276 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H  ++K  +   V+L   LI +Y +   L  A  +FDEM +RN VSW  ++SGY
Sbjct: 27  REGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGY 86

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           + +G ++EA  +F +M+R+    N +   +VL +C   G SGF+ G Q+H  + K N   
Sbjct: 87  SQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCT--GFSGFELGRQIHSHIFKRNYEN 144

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V + L+ MY       + AR +FE +  RD++S  +IIS Y+Q G      +LF R+
Sbjct: 145 HIFVGSSLLDMYAKAGRIHE-ARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRL 203

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL---QQILAMVKKAGLLSDLYVGSALV 238
           QREG    +  N  T+ SL+TA     LSG   L   +Q+ + V +  L   + + ++L+
Sbjct: 204 QREG----MSSNYVTYASLLTA-----LSGLAALDHGKQVHSHVLRCELPFYVVLQNSLI 254

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK 274
             +++ GN  YARKIF  M  + V+S N ++ G  K
Sbjct: 255 DMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSK 290



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 160/312 (51%), Gaps = 14/312 (4%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKN----------VVSMNGLMEGRRKGKEVHGYLIR 284
           +A++SG+++ G    A  +F QM++ +          V+S      G   G+++H ++ +
Sbjct: 80  TAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFK 139

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
               + + VG+ L++MYAK G I ++R VF  +  +D VS   +ISG  Q G  EEA+  
Sbjct: 140 RNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALEL 199

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           FC ++R+G+ S+  +  S L++ + L  +  G+Q+H   L+  L   V + N+L+ +Y+ 
Sbjct: 200 FCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSK 259

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG-WSPNGVTFI 463
            G L+   K+F  MP    +SWN+++  ++     + E VK +  MR      P+ VTF+
Sbjct: 260 CGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGI-EVVKLFKLMREENKVKPDSVTFL 318

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMS 521
            +L+  S   +   G ++  +++      E  IE+   ++   G+ G +++  ++  +M 
Sbjct: 319 AVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMP 378

Query: 522 ERRDEVSWNSMI 533
                  W S++
Sbjct: 379 FEPTAAIWGSLL 390



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 155/335 (46%), Gaps = 36/335 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +  H  I K  +   +F+ ++L+++Y + G +  A  +F+ +P+R+ VS   I+SGY  
Sbjct: 130 GRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQ 189

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+  EA ++F  + R G   N     S+L A    G +    G QVH  VL+    F  
Sbjct: 190 LGLDEEALELFCRLQREGMSSNYVTYASLLTALS--GLAALDHGKQVHSHVLRCELPFYV 247

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           ++ N LI MY  C  + + AR+IF  +  R +ISWN+++  YS+ G  I V KLF  M+ 
Sbjct: 248 VLQNSLIDMYSKC-GNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMRE 306

Query: 184 EGFRYSLKPNEYTFGSLITAA------------YSSVLSGSYLLQQILAMVKKAGLLSDL 231
           E     +KP+  TF ++++              +  +++G     +I A ++  G + DL
Sbjct: 307 EN---KVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGG---DEIEAGIEHYGCVIDL 360

Query: 232 YVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFD 289
                      R G    A ++ ++M  +   ++ G + G  R       G  +   L +
Sbjct: 361 ---------LGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLE 411

Query: 290 MVAVGNG----LVNMYAKCGTIDDSRSVFRFMIGK 320
           +     G    L N+YA  G  +D R+V   M+ K
Sbjct: 412 IEPENAGNYVILSNLYASAGRWEDVRNVRELMMEK 446



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 13/180 (7%)

Query: 552 MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR 611
           M  +G  +    +  +L+ C +   +  G  VHA  ++ C    V + + L+ +Y+KC  
Sbjct: 1   MAIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCEC 60

Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
           +  A   FD M  RNV SW +MISGY++ G   +AL LF QM      P+  TF  VLS+
Sbjct: 61  LGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSS 120

Query: 672 CSHAGLVDEGFKHFKSMSQVYGLI------PQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
           C+       GF  F+   Q++  I        +   S ++D+  +AG + +       +P
Sbjct: 121 CT-------GFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLP 173


>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
 gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
 gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 776

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 252/679 (37%), Positives = 393/679 (57%), Gaps = 38/679 (5%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R GK VH  ++  GL + + + N + +MYA+CG + ++R VF     +D VSWN ++SG 
Sbjct: 119 RTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGY 178

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC---------ASLGWIMLGQQIHGEG 383
            + G  EE +  F  M R GL  ++F+L S +  C           +G   + + +HG  
Sbjct: 179 VRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCV 238

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA--LVS 441
           +K GLD+D+ +++A++ +YA  G L+  + +F  +P+ + +  N++I  F   EA  +  
Sbjct: 239 VKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAR 298

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           EA+  Y +++  G  P+  +F +IL A +       G Q+H QV+K++   +  I +AL+
Sbjct: 299 EALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALI 358

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
             Y   G M+D  + F R   ++D V W S+ISG + NEL  +A+ L    ++ G R D 
Sbjct: 359 DLYSGSGCMEDGYRCF-RSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDV 417

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
           F  ++V++ACAS+A    G ++    V++       +G++ + M ++ G +D A+R F  
Sbjct: 418 FAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQE 477

Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL--PDHVTFVGVLSACSHAGLVD 679
           M  R+V SW+++IS +A HG    AL +F++M LD  +  P+ +TF+ +L+ACSH GLVD
Sbjct: 478 MESRDVVSWSAVISSHAHHGCARDALCVFNEM-LDAKVAPPNEITFLSILTACSHGGLVD 536

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           EG +++  M+  YGL P ++  +C+VDLLGRAG L   E FI       ++++WR++L  
Sbjct: 537 EGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLL-- 594

Query: 740 CCRANCR---KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAE 796
              A+CR     E G+  A+ + ++EP ++ +YV+L NMY   G+    +K R  MKE  
Sbjct: 595 ---ASCRIHGDMERGQLVADKIMDLEPTSSASYVILYNMYLDAGELSSASKTRDLMKERG 651

Query: 797 VKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLE 856
           VKKE G SW+ +  GVH FVAGD+SHPE   IY K+ E+  K+  AG   +         
Sbjct: 652 VKKEPGLSWIELSSGVHSFVAGDKSHPESKAIYRKVAEMVSKV--AGISSR--------- 700

Query: 857 PESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLR 915
              ++DL   HSEK+AVAF ++      PIR+MKNLRVC DCHS  + ISK   REI+LR
Sbjct: 701 ---EQDLAGCHSEKLAVAFGMIHLPQSAPIRVMKNLRVCRDCHSTMELISKSERREIILR 757

Query: 916 DSNRFHHFNDGKCSCGDYW 934
           D+ RFH F DG CSCG YW
Sbjct: 758 DAIRFHRFRDGSCSCGGYW 776



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 152/630 (24%), Positives = 280/630 (44%), Gaps = 70/630 (11%)

Query: 20  VFLCNTLINVYVRVGDLAS--ASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM 77
           +FL N L+  Y R+G  A   A++L DEMP RN+VS+  ++  Y+  G+   +   F   
Sbjct: 34  LFLRNCLLASYCRLGVGAPLHAARLLDEMPRRNAVSYNLVIVAYSRAGLPALSLATFARA 93

Query: 78  VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
                +++R+   + L AC        + G  VH +V+         +SN + +MY  C 
Sbjct: 94  RAWARVVDRFTYAAALAACSR--ALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCG 151

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
           E  + ARR+F+  E R                D +S   L S   R G R      E T 
Sbjct: 152 EMGE-ARRVFDAAEER----------------DDVSWNALLSGYVRAGAR------EETL 188

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
                              ++ +++ + GL            G+    N +    I +  
Sbjct: 189 -------------------EVFSLMCRHGL------------GW----NSFALGSIIKCC 213

Query: 258 IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
              +  +  G + G R  + VHG ++++GL   + + + +++MYAK G + ++ ++F+ +
Sbjct: 214 ASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSV 273

Query: 318 IGKDSVSWNTMISGL---DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
              + +  N MI+G    +      EA+  +  ++  G+  S FS  S L +C   G   
Sbjct: 274 PDPNVIVLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFG 333

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
            G+QIHG+ LK     DV + +AL+ LY+ +G +    + F  +P+ D V W SVI    
Sbjct: 334 FGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCV 393

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANET 494
            +E L  EA++ + +  R G  P+     +++ A +S ++ + G Q+    +K      T
Sbjct: 394 QNE-LFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFT 452

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
            + N+ +    + G++D   + F  M E RD VSW+++IS + H+     A+ +   M+ 
Sbjct: 453 AMGNSFIHMCARSGDVDAATRRFQEM-ESRDVVSWSAVISSHAHHGCARDALCVFNEMLD 511

Query: 555 -RGQRLDHFTFATVLSACASVATLERGMEVHAC-GVRACLEFDVVIGSALVDMYSKCGRI 612
            +    +  TF ++L+AC+    ++ G+  +        L   +   + +VD+  + GR+
Sbjct: 512 AKVAPPNEITFLSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRL 571

Query: 613 DYASRFF-DLMPVRNVYSWNSMISGYARHG 641
             A  F  D     +   W S+++    HG
Sbjct: 572 ADAEAFIRDSAFHDDAVVWRSLLASCRIHG 601



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 119/487 (24%), Positives = 221/487 (45%), Gaps = 65/487 (13%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++  G    +FL N++ ++Y R G++  A ++FD   +R+ VSW  ++SGY
Sbjct: 119 RTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGY 178

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGP-------SGFKFGMQVHCLV 114
              G   E  ++F  M R G   N +ALGS+++ C             G +    VH  V
Sbjct: 179 VRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCV 238

Query: 115 LKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISV 174
           +K+    D  +++ +I MY      T+ A  +F+ +   ++I  N++I+ +  R +   V
Sbjct: 239 VKAGLDADLFLASAMIDMYAKRGALTN-AVALFKSVPDPNVIVLNAMIAGFC-REEAADV 296

Query: 175 FK----LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY-LLQQILAMVKKAGLLS 229
            +    L+S +Q  G    ++P+E++F S++ A     L+G +   +QI   V K     
Sbjct: 297 AREALGLYSELQSRG----MQPSEFSFSSILRACN---LAGEFGFGKQIHGQVLKHSFQG 349

Query: 230 DLYVGSAL-------------------------------VSGFARLGNFYYARKIFEQMI 258
           D+Y+GSAL                               +SG  +   F  A ++F++ +
Sbjct: 350 DVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESV 409

Query: 259 ----QKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
               + +V +M+ +M         R G+++    ++SG     A+GN  ++M A+ G +D
Sbjct: 410 RCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVD 469

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSC 367
            +   F+ M  +D VSW+ +IS    +GC  +A+  F  M    +   N  + +S L++C
Sbjct: 470 AATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTAC 529

Query: 368 ASLGWIMLGQQIHG-EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ-VS 425
           +  G +  G + +G    + GL   +     ++ L   AG L+           HD  V 
Sbjct: 530 SHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVV 589

Query: 426 WNSVIGA 432
           W S++ +
Sbjct: 590 WRSLLAS 596



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 120/529 (22%), Positives = 238/529 (44%), Gaps = 42/529 (7%)

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGT---IDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           VH +L R+     + + N L+  Y + G    +  +R +   M  +++VS+N +I    +
Sbjct: 21  VHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAAR-LLDEMPRRNAVSYNLVIVAYSR 79

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G    ++  F   R    +   F+  + L++C+    +  G+ +H   +  GL + + +
Sbjct: 80  AGLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTGKAVHAMVVLGGLGNGLFL 139

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           SN++ S+YA  G +    +VF    E D VSWN+++  +  + A   E ++ +  M R G
Sbjct: 140 SNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAR-EETLEVFSLMCRHG 198

Query: 455 WSPNGVTFINILAAASSFSM---------GKLGHQVHAQVIKYNVANETTIENALLSCYG 505
              N     +I+   +S S          G++   VH  V+K  +  +  + +A++  Y 
Sbjct: 199 LGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYA 258

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE---LLPKAMNLVWFMMQRGQRLDHF 562
           K G + +   +F  + +  + +  N+MI+G+   E   +  +A+ L   +  RG +   F
Sbjct: 259 KRGALTNAVALFKSVPD-PNVIVLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSEF 317

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           +F+++L AC        G ++H   ++   + DV IGSAL+D+YS  G ++   R F  +
Sbjct: 318 SFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSL 377

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGL----- 677
           P ++V  W S+ISG  ++   ++AL LF +    G  PD      V++AC+   +     
Sbjct: 378 PKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGE 437

Query: 678 ------VDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
                 V  GF  F +M   +            + +  R+G++D       +M  + + +
Sbjct: 438 QIQCLAVKSGFNRFTAMGNSF------------IHMCARSGDVDAATRRFQEME-SRDVV 484

Query: 732 IWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
            W  V+ +     C +  L      +  ++ P N + ++ +    + GG
Sbjct: 485 SWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSHGG 533



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 152/341 (44%), Gaps = 22/341 (6%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q+LKH F  DV++ + LI++Y   G +    + F  +P ++ V W  ++SG    
Sbjct: 336 KQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQN 395

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            +  EA ++F+E VR G   + +A+ SV+ AC     +  + G Q+ CL +KS       
Sbjct: 396 ELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVA--RTGEQIQCLAVKSGFNRFTA 453

Query: 125 VSNVLIAMYGSCLES--TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
           + N  I M   C  S   D A R F+E+E+RD++SW+++IS ++  G       +F+ M 
Sbjct: 454 MGNSFIHM---CARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEML 510

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
                    PNE TF S++TA     L    L    + M  + GL   +   + +V    
Sbjct: 511 DAKV---APPNEITFLSILTACSHGGLVDEGLRYYGI-MNDEYGLSPTIKHCTCVVDLLG 566

Query: 243 RLGNFYYARK-IFEQMIQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG---- 296
           R G    A   I +     + V    L+   R  G    G L+   + D+    +     
Sbjct: 567 RAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADKIMDLEPTSSASYVI 626

Query: 297 LVNMYAKCGTIDDSRSVFRFM----IGKDS-VSWNTMISGL 332
           L NMY   G +  +      M    + K+  +SW  + SG+
Sbjct: 627 LYNMYLDAGELSSASKTRDLMKERGVKKEPGLSWIELSSGV 667


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/669 (35%), Positives = 380/669 (56%), Gaps = 5/669 (0%)

Query: 267 GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
           G +     G+ +H  L R+      ++ N L+ MY  CG+  D + VF  M+ K+ VSW 
Sbjct: 98  GKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWV 157

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            +IS   +NG  E+AI  F  M+  G+  ++   +S L SC    ++ LG+QIH   ++ 
Sbjct: 158 IVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRA 217

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
            L+++++V  A+ ++Y   G+L     VF  M   + V+W  ++  +  ++ L   A++ 
Sbjct: 218 QLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKL-EVALEL 276

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
           +  M   G   +   F  +L          +G Q+H+ ++K    +E ++   L+  Y K
Sbjct: 277 FARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVK 336

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
           CG+++   + F R+SE  D VSW+++ISG+  +  L   + +   +   G  L+ F + +
Sbjct: 337 CGDIESAYRSFGRISEPND-VSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTS 395

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           V  ACA+ A L  G + H   ++  L   +   SA+V MYSKCGR+DYA R F+ +   +
Sbjct: 396 VFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPD 455

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
             +W ++ISGYA HG+  +AL  F +M+  G  P+ VTF+ VL+ACSH+GLV E  ++  
Sbjct: 456 AVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLG 515

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
           SMS+ YG+ P ++ + CM+D   RAG L +  E IN+MP  P+++ W+++LG C  A+C 
Sbjct: 516 SMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCW-AHC- 573

Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
             +LG+ AA  LF ++P +   Y+LL N+Y++ GKWE+    RK M E E+KKE  CSW+
Sbjct: 574 DLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWI 633

Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSY 866
           ++K  VH FV GD  HP+ + IY KL+E    + D+      +         ++++ +  
Sbjct: 634 SVKGQVHRFVVGDRHHPQTEAIYSKLEEFKCSVIDSPVRLLNEEDDVSCSLSARKEQLLD 693

Query: 867 HSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFND 925
           HSEK+A+AF +++     PI + KNLR C DCH   K +S + GR+IV+RDS RFHHF  
Sbjct: 694 HSEKLAIAFGLISTEDNAPILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKS 753

Query: 926 GKCSCGDYW 934
           GKCSC DYW
Sbjct: 754 GKCSCNDYW 762



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 137/525 (26%), Positives = 248/525 (47%), Gaps = 57/525 (10%)

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           + +G   EA    KEM  A   +  ++   +  AC +        G  +H  + ++ +  
Sbjct: 63  SKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKL--RSLADGRLIHDRLRRTVKNP 120

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
            G + N L+ MY  C    D  +++F+E+  ++L+SW  +IS Y++ G+     +LFS M
Sbjct: 121 SGSIENCLLRMYCDCGSCID-VQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDM 179

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL--QQILAMVKKAGLLSDLYVGSALVS 239
           Q  G R    PN   + SL+     S L  S+L   +QI + V +A L +++ V +A+ +
Sbjct: 180 QASGIR----PNSAVYMSLL----QSCLGPSFLELGKQIHSHVIRAQLNANITVETAICN 231

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------- 274
            + R G    A+ +F+ M  +N V+  GLM G  +                         
Sbjct: 232 MYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFV 291

Query: 275 ----------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                           G+++H ++++ G    V+VG  LV+ Y KCG I+ +   F  + 
Sbjct: 292 FSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRIS 351

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
             + VSW+ +ISG  Q+G  E+ I  F ++R +G++ ++F   S   +CA+   + +G Q
Sbjct: 352 EPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQ 411

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
            HG+ +K GL S +   +A++++Y+  G L    + F  + E D V+W ++I  +A    
Sbjct: 412 AHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYA-YHG 470

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIE 497
             +EA+ ++  M+  G  PN VTFI +L A S   +     Q    + + Y V       
Sbjct: 471 NAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHY 530

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
           + ++  Y + G + +  ++  RM    D +SW S++ G + H +L
Sbjct: 531 DCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDL 575



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 190/375 (50%), Gaps = 6/375 (1%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
             +C  L  +  G+ IH    +   +   S+ N LL +Y D G      KVF  M   + 
Sbjct: 94  FEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNL 153

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSW  VI A+A +  L  +A++ + DM+ +G  PN   ++++L +    S  +LG Q+H+
Sbjct: 154 VSWVIVISAYAKNGEL-EKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHS 212

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
            VI+  +    T+E A+ + Y +CG ++  + +F  M + ++ V+W  ++ GY   + L 
Sbjct: 213 HVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGM-DAQNAVTWTGLMVGYTQAKKLE 271

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
            A+ L   M   G  LD F F+ VL  C  +   + G ++H+  V+   E +V +G+ LV
Sbjct: 272 VALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLV 331

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           D Y KCG I+ A R F  +   N  SW+++ISG+++ G  +  + +F+ ++ +G + +  
Sbjct: 332 DFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSF 391

Query: 664 TFVGVLSACSHAGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFIN 722
            +  V  AC+    ++ G + H  ++ +  GL+  L   S MV +  + G LD       
Sbjct: 392 IYTSVFQACAAQANLNMGSQAHGDAIKR--GLVSYLYGESAMVTMYSKCGRLDYARRAFE 449

Query: 723 KMPITPNSLIWRTVL 737
            +   P+++ W  ++
Sbjct: 450 SID-EPDAVAWTAII 463



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 216/474 (45%), Gaps = 56/474 (11%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D +L H ++ +        + N L+ +Y   G      K+FDEM  +N VSW  ++S Y 
Sbjct: 105 DGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYA 164

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G   +A ++F +M  +G   N     S+L++C   GPS  + G Q+H  V+++    +
Sbjct: 165 KNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSC--LGPSFLELGKQIHSHVIRAQLNAN 222

Query: 123 GLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
             V   +  MY  C  LE    A+ +F+ ++ ++ ++W  ++  Y+Q        +LF+R
Sbjct: 223 ITVETAICNMYVRCGWLEG---AKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFAR 279

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M  EG    ++ +E+ F  ++       L    + +QI + + K G  S++ VG+ LV  
Sbjct: 280 MAMEG----VELDEFVFSIVLKVCCG--LEDWDMGRQIHSHIVKLGAESEVSVGTPLVDF 333

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------- 274
           + + G+   A + F ++ + N VS + L+ G  +                          
Sbjct: 334 YVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIY 393

Query: 275 ---------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                          G + HG  I+ GL   +   + +V MY+KCG +D +R  F  +  
Sbjct: 394 TSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDE 453

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
            D+V+W  +ISG   +G   EA+  F  M+  G+  +  + I+ L++C+  G +   +Q 
Sbjct: 454 PDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQY 513

Query: 380 HGE-GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIG 431
            G      G+   +   + ++  Y+ AG L   L++   MP E D +SW S++G
Sbjct: 514 LGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLG 567



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 131/273 (47%), Gaps = 19/273 (6%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H  I+K G   +V +   L++ YV+ GD+ SA + F  + + N VSW+ ++SG++  
Sbjct: 309 RQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQS 368

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   +  K+F  +   G +LN +   SV +AC     +    G Q H   +K      GL
Sbjct: 369 GRLEDCIKIFTSLRSEGVVLNSFIYTSVFQAC--AAQANLNMGSQAHGDAIKR-----GL 421

Query: 125 VS-----NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           VS     + ++ MY  C    D ARR FE I+  D ++W +IIS Y+  G+       F 
Sbjct: 422 VSYLYGESAMVTMYSKC-GRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFR 480

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           RMQ     Y ++PN  TF +++TA   S L      Q + +M +  G+   +     ++ 
Sbjct: 481 RMQ----SYGVRPNAVTFIAVLTACSHSGLVAE-AKQYLGSMSRDYGVKPTIDHYDCMID 535

Query: 240 GFARLGNFYYARKIFEQM-IQKNVVSMNGLMEG 271
            ++R G    A ++  +M  + + +S   L+ G
Sbjct: 536 TYSRAGLLQEALELINRMPFEPDAMSWKSLLGG 568


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 248/664 (37%), Positives = 377/664 (56%), Gaps = 6/664 (0%)

Query: 272 RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
           +R   ++H  L+ SGL     +   LVN  +  G I  +R +F      D   WN +I  
Sbjct: 69  KRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRS 128

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
             +N  Y + +  +  MR  G+    F+    L +C  L    L   IHG+ +K G  SD
Sbjct: 129 YSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSD 188

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           V V N L++LYA  G++     VF  +     VSW S+I  +A +   V EA++ +  MR
Sbjct: 189 VFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAV-EALRMFSQMR 247

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             G  P+ +  ++IL A +     + G  +H  VIK  + +E  +  +L + Y KCG + 
Sbjct: 248 NNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVT 307

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
             +  F +M +  + + WN+MISGY  N    +A+NL  +M+ R  + D  T  + + A 
Sbjct: 308 VAKSFFDQM-KTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLAS 366

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           A V +LE    +     ++    D+ + ++L+DMY+KCG +++A R FD    ++V  W+
Sbjct: 367 AQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWS 426

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           +MI GY  HG G +A+ L+  MK  G  P+ VTF+G+L+AC+H+GLV EG++ F  M   
Sbjct: 427 AMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKD- 485

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
           + ++P+ E +SC+VDLLGRAG L +   FI K+PI P   +W  +L AC    C    LG
Sbjct: 486 FEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRC--VTLG 543

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
             AAN LF ++P N  +YV L+N+YAS   W+ VA  R  M+E  + K+ G S + +   
Sbjct: 544 EYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGK 603

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
           +  F  GD+SHP    I+++L+ L +++++ G+VP T+  L DL  E KE+ +S+HSE+I
Sbjct: 604 LQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERI 663

Query: 872 AVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           AVA+ L   +    +RI KNLR C +CHSA K ISK+V REI++RD+NRFHHF DG CSC
Sbjct: 664 AVAYGLISTAPGTTLRITKNLRACVNCHSAIKLISKLVEREIIVRDANRFHHFKDGLCSC 723

Query: 931 GDYW 934
           GDYW
Sbjct: 724 GDYW 727



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 211/468 (45%), Gaps = 53/468 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H +++  G  ++ FL   L+N    +G +  A KLFDE    +   W  I+  Y+   M 
Sbjct: 76  HNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMY 135

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQ--VHCLVLKSNQTFDGLV 125
            +  +M++ M   G   + +    VL+AC E       FG+   +H  ++K     D  V
Sbjct: 136 RDTVEMYRWMRWTGVHPDGFTFPYVLKACTEL----LDFGLSCIIHGQIIKYGFGSDVFV 191

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
            N L+A+Y  C      A+ +F+ +  R ++SW SIIS Y+Q G  +   ++FS+M+  G
Sbjct: 192 QNGLVALYAKC-GHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNG 250

Query: 186 FRYSLKPNEYTFGSLITAAYSSV--------LSG----------SYLLQQILAMVKKAGL 227
               +KP+     S++  AY+ V        + G            LL  + A   K GL
Sbjct: 251 ----VKPDWIALVSILR-AYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGL 305

Query: 228 L------------SDLYVGSALVSGFARLGNFYYARKIFEQMIQKN-----VVSMNGLME 270
           +            +++ + +A++SG+A+ G+   A  +F  MI +N     V   + ++ 
Sbjct: 306 VTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLA 365

Query: 271 GRRKG-----KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
             + G     + +  Y+ +S     + V   L++MYAKCG+++ +R VF     KD V W
Sbjct: 366 SAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMW 425

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           + MI G   +G   EAI  +  M++ G+  ++ + I  L++C   G +  G ++      
Sbjct: 426 SAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKD 485

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
             +       + ++ L   AGYL         +P    VS W +++ A
Sbjct: 486 FEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSA 533



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 140/266 (52%), Gaps = 9/266 (3%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           + H QI+K+GF  DVF+ N L+ +Y + G +  A  +FD +  R  VSW  I+SGY   G
Sbjct: 175 IIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNG 234

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
            + EA +MF +M   G   +  AL S+LRA  +      + G  +H  V+K     +  +
Sbjct: 235 KAVEALRMFSQMRNNGVKPDWIALVSILRAYTDV--DDLEQGRSIHGFVIKMGLEDEPAL 292

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
              L A Y  C   T  A+  F++++T ++I WN++IS Y++ G       LF  M    
Sbjct: 293 LISLTAFYAKCGLVT-VAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYM---- 347

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
              ++KP+  T  S + A  S+ +    L Q +   V K+   SD++V ++L+  +A+ G
Sbjct: 348 ISRNIKPDSVTVRSAVLA--SAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCG 405

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEG 271
           +  +AR++F++   K+VV  + ++ G
Sbjct: 406 SVEFARRVFDRNSDKDVVMWSAMIMG 431



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 7/208 (3%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H  ++K G   +  L  +L   Y + G +  A   FD+M   N + W  ++SGY
Sbjct: 272 EQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGY 331

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G + EA  +F  M+      +   + S + A  + G    +    +   V KSN   
Sbjct: 332 AKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVG--SLELAQWMDDYVSKSNYGS 389

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V+  LI MY  C  S + ARR+F+    +D++ W+++I  Y   G       L+  M
Sbjct: 390 DIFVNTSLIDMYAKC-GSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVM 448

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVL 209
           ++ G    + PN+ TF  L+TA   S L
Sbjct: 449 KQAG----VFPNDVTFIGLLTACNHSGL 472


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 248/646 (38%), Positives = 390/646 (60%), Gaps = 8/646 (1%)

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           ++GN L++ Y KCG++  +R VF  +  +  V+WN+MI+   +NG  +EAI  +  M  D
Sbjct: 111 SLGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPD 170

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD-SDVSVSNALLSLYADAGYLSR 410
           G++   F+  S   + + LG +  GQ+ HG+ + LG+  S+V V +AL+ +YA  G +  
Sbjct: 171 GILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRD 230

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
              V   +   D V + ++I  ++       E+++ + +M + G   N  T  ++L    
Sbjct: 231 ARLVSDQVVGKDVVLFTALIVGYS-HHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCG 289

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
           +      G  +H  ++K  + +    + +LL+ Y +CG +DD  K+F +     ++V+W 
Sbjct: 290 NLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINP-NQVTWT 348

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           S+I G + N     A+     M++     + FT ++VL AC+S+A LE+G ++HA  ++ 
Sbjct: 349 SVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKF 408

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
            L+ D  +G+AL+D Y KCG  + A   F+ +   +V S NSMI  YA++G G +AL LF
Sbjct: 409 GLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLF 468

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
           S MK  G  P++VT++GVLSAC++AGL++EG   F S      +    + ++CMVDLLGR
Sbjct: 469 SGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGR 528

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
           AG L + E  IN++ I+ + +IWRT+L A CR +    E+ ++  N + ++ P++   +V
Sbjct: 529 AGRLKEAEMLINQVNIS-DVVIWRTLLSA-CRIHG-DVEMAKRVMNRVIDLAPEDGGTHV 585

Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
           LL+N+YAS G W  V + + AM+E  +KK    SWV ++  +H F+AGD SHP    I E
Sbjct: 586 LLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIRE 645

Query: 831 KLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNS--KLPIRIM 888
           KL+EL +K+++ GYVP T+F L DL+ E K   + YHSEK+AVAF L R++     IRI+
Sbjct: 646 KLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRIL 705

Query: 889 KNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           KNLRVCGDCH+  KF+SKIVGR+I+ RD  RFHHF +G CSCGDYW
Sbjct: 706 KNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDYW 751



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 236/489 (48%), Gaps = 61/489 (12%)

Query: 108 MQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQ 167
           +Q H L     + F   + N LI  Y  C  S   AR++F+E+  R +++WNS+I+ Y +
Sbjct: 99  IQSHAL----KRGFHHSLGNKLIDAYLKC-GSVVYARKVFDEVPHRHIVAWNSMIASYIR 153

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
            G +     ++ RM  +G    + P+E+TF S+  A     L          ++V   G+
Sbjct: 154 NGRSKEAIDIYQRMVPDG----ILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGV 209

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------------- 271
            S+++VGSALV  +A+ G    AR + +Q++ K+VV    L+ G                
Sbjct: 210 -SNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRN 268

Query: 272 -RRKGKE------------------------VHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
             +KG E                        +HG ++++GL   VA    L+ MY +CG 
Sbjct: 269 MTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGL 328

Query: 307 IDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
           +DDS  VF+  I  + V+W ++I GL QNG  E A++ F  M R  +  ++F+L S L +
Sbjct: 329 VDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRA 388

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSW 426
           C+SL  +  G+QIH   +K GLD D  V  AL+  Y   G       VF  + E D VS 
Sbjct: 389 CSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSV 448

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
           NS+I ++A +     EA++ +  M+  G  PN VT++ +L+A +  + G L    H    
Sbjct: 449 NSMIYSYAQN-GFGHEALQLFSGMKDTGLEPNNVTWLGVLSACN--NAGLLEEGCHIFSS 505

Query: 487 KYNVAN-ETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHN--E 540
             N  N E T ++   ++   G+ G + + E +  +++   D V W +++S   IH   E
Sbjct: 506 ARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVN-ISDVVIWRTLLSACRIHGDVE 564

Query: 541 LLPKAMNLV 549
           +  + MN V
Sbjct: 565 MAKRVMNRV 573



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 214/467 (45%), Gaps = 60/467 (12%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           LK GF +   L N LI+ Y++ G +  A K+FDE+P R+ V+W  +++ Y   G S EA 
Sbjct: 104 LKRGFHHS--LGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAI 161

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
            +++ MV  G L + +   SV +A  + G    G +   Q   L +  +  F   V + L
Sbjct: 162 DIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVF---VGSAL 218

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           + MY    +  D AR + +++  +D++ + ++I  YS  G+     ++F  M ++G    
Sbjct: 219 VDMYAKFGKMRD-ARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKG---- 273

Query: 190 LKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           ++ NEYT  S++        + SG    + I  ++ KAGL S +   ++L++ + R G  
Sbjct: 274 IEANEYTLSSVLVCCGNLEDLTSG----RLIHGLIVKAGLESAVASQTSLLTMYYRCGLV 329

Query: 248 YYARKIFEQMIQKNVVSMN----GLMEGRR------------------------------ 273
             + K+F+Q I  N V+      GL++  R                              
Sbjct: 330 DDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRAC 389

Query: 274 -------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                  +GK++H  +++ GL     VG  L++ Y KCG+ + +RSVF  ++  D VS N
Sbjct: 390 SSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVN 449

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
           +MI    QNG   EA+  F  M+  GL  +N + +  LS+C + G +  G  I       
Sbjct: 450 SMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNS 509

Query: 387 G-LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
           G ++        ++ L   AG L     +   +   D V W +++ A
Sbjct: 510 GNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSA 556



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 145/317 (45%), Gaps = 33/317 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +L H  I+K G    V    +L+ +Y R G +  + K+F +  + N V+W  ++ G   
Sbjct: 297 GRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQ 356

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G    A   F++M+R+    N + L SVLRAC        + G Q+H +V+K     D 
Sbjct: 357 NGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAM--LEQGKQIHAIVMKFGLDIDK 414

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V   LI  YG C  ST+ AR +F  +   D++S NS+I  Y+Q G      +LFS M+ 
Sbjct: 415 YVGAALIDFYGKC-GSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKD 473

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAG---LLSDLYVGSAL 237
            G    L+PN  T+  +++A      + + LL++   I +  + +G   L  D Y  + +
Sbjct: 474 TG----LEPNNVTWLGVLSAC-----NNAGLLEEGCHIFSSARNSGNIELTKDHY--ACM 522

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYL-----IRSGLFDMVA 292
           V    R G    A  +  Q+   +VV    L+   R    +HG +     + + + D+  
Sbjct: 523 VDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACR----IHGDVEMAKRVMNRVIDLAP 578

Query: 293 VGNG----LVNMYAKCG 305
              G    L N+YA  G
Sbjct: 579 EDGGTHVLLSNLYASTG 595


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 231/641 (36%), Positives = 371/641 (57%), Gaps = 6/641 (0%)

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           N ++ MY KCG++ D+R VF  M  ++ VSWNT+IS   +NG +++    F  M      
Sbjct: 49  NSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETK 108

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
            +  + I  L S  +   + +G+QIH   ++ GL S+ SV+ A+ ++Y   G+L     V
Sbjct: 109 PNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELV 168

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  M E + V+W  ++  +  +E  + +A+  +  M   G   +   F  +L A +    
Sbjct: 169 FEKMSEKNAVAWTGIMVGYTQAERQM-DALALFAKMVNEGVELDEYVFSIVLKACAGLEE 227

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
              G Q+H  ++K  + +E ++   L+  Y KC  ++   K F  +SE  D VSW+++I+
Sbjct: 228 LNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPND-VSWSALIT 286

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           GY       +A+     +  R   ++ FT+ ++  AC+++A    G + HA  +++ L  
Sbjct: 287 GYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVA 346

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
                SA++ MYS+CGR+DYA+R F+ +   +  +W ++I+GYA  G+  +AL LF +M+
Sbjct: 347 YQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQ 406

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
             G  P+ VTF+ VL+ACSH+GLV EG ++ +SMS  YG+   ++ + CMVD+  RAG L
Sbjct: 407 DCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFL 466

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
            +  E I  MP +P+++ W+ +LG C     R  E+G  AA  LF+++P++   Y+L+ N
Sbjct: 467 QEALELIRSMPFSPDAMSWKCLLGGCW--TYRNLEIGELAAENLFQLDPEDTAGYILMFN 524

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           +YAS GKW++ A  RK M E  ++KE  CSW+T+K  VH F+ GD+ HP+ + IY KL+ 
Sbjct: 525 LYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEA 584

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRV 893
           LN  +        T+  + +  PE KE L+  HSE++A+AF +++  S  P+ + KNLR 
Sbjct: 585 LNDSVIKEETGLLTEEDVSNSLPERKEQLL-VHSERLALAFGLISTPSSAPVVVFKNLRA 643

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           C DCH   K +S I GREIV+RDS RFHHF  G+CSC DYW
Sbjct: 644 CKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECSCNDYW 684



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 219/491 (44%), Gaps = 49/491 (9%)

Query: 189 SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
           S+ P  Y           S+  G    +Q+   VK        ++ ++++  + + G+  
Sbjct: 7   SVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNP----PEFLENSVLKMYCKCGSLA 62

Query: 249 YARKIFEQMIQKNVVSMNGLME-------------------------------------- 270
            ARK+F++M ++N+VS N ++                                       
Sbjct: 63  DARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLL 122

Query: 271 ---GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
              G   GK++H + IRSGL    +V   + NMY KCG ++ +  VF  M  K++V+W  
Sbjct: 123 NPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTG 182

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           ++ G  Q     +A+  F  M  +G+    +     L +CA L  +  G+QIHG  +KLG
Sbjct: 183 IMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLG 242

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
           L+S+VSV   L+  Y     L    K F  + E + VSW+++I  +        EA+K +
Sbjct: 243 LESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEF-EEALKTF 301

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
             +R      N  T+ +I  A S+ +    G Q HA  IK ++      E+A+++ Y +C
Sbjct: 302 ESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRC 361

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
           G +D   ++F  + +  D V+W ++I+GY +    P+A+ L   M   G R +  TF  V
Sbjct: 362 GRLDYATRVFESIDD-PDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAV 420

Query: 568 LSACASVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR- 625
           L+AC+    +  G + + +      +   +     +VD+YS+ G +  A      MP   
Sbjct: 421 LTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSP 480

Query: 626 NVYSWNSMISG 636
           +  SW  ++ G
Sbjct: 481 DAMSWKCLLGG 491



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 217/474 (45%), Gaps = 56/474 (11%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D +LFH Q+ +       FL N+++ +Y + G LA A K+FDEM +RN VSW  I+S Y 
Sbjct: 28  DGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYA 87

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G+ ++   MF  M+      N       LR+     PSG + G Q+H   ++S    +
Sbjct: 88  ENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSL--LNPSGLEIGKQIHSHAIRSGLGSN 145

Query: 123 GLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
             V+  +  MY  C  LE    A  +FE++  ++ ++W  I+  Y+Q    +    LF++
Sbjct: 146 ASVNTAISNMYVKCGWLEG---AELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAK 202

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M  EG    ++ +EY F  ++ A   + L      +QI   + K GL S++ VG+ LV  
Sbjct: 203 MVNEG----VELDEYVFSIVLKAC--AGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDF 256

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------------------------- 272
           + +  N   A K FE + + N VS + L+ G                             
Sbjct: 257 YVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTY 316

Query: 273 -------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                          G + H   I+S L       + ++ MY++CG +D +  VF  +  
Sbjct: 317 TSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDD 376

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ- 378
            D+V+W  +I+G    G   EA+  F  M+  G+  +  + I+ L++C+  G ++ G+Q 
Sbjct: 377 PDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQY 436

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIG 431
           +       G+ + +   + ++ +Y+ AG+L   L++   MP   D +SW  ++G
Sbjct: 437 LESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLG 490



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 193/397 (48%), Gaps = 16/397 (4%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M   G+  S  S      +C  +  +  G+  H +  +   +    + N++L +Y   G 
Sbjct: 1   MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           L+   KVF  M E + VSWN++I A+A++  +  +    + +M      PNG T+I  L 
Sbjct: 61  LADARKVFDEMRERNLVSWNTIISAYAEN-GVFDKGFCMFSNMLELETKPNGSTYIGFLR 119

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
           +  + S  ++G Q+H+  I+  + +  ++  A+ + Y KCG ++  E +F +MSE ++ V
Sbjct: 120 SLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSE-KNAV 178

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           +W  ++ GY   E    A+ L   M+  G  LD + F+ VL ACA +  L  G ++H   
Sbjct: 179 AWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHI 238

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
           V+  LE +V +G+ LVD Y KC  ++ A++ F+ +   N  SW+++I+GY + G  ++AL
Sbjct: 239 VKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEAL 298

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG------LIPQLEQF 701
             F  ++      +  T+  +  ACS   L D     F S +Q +       L+      
Sbjct: 299 KTFESLRTRSVDINSFTYTSIFQACS--ALAD-----FNSGAQAHADAIKSSLVAYQHGE 351

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
           S M+ +  R G LD        +   P+++ W  ++ 
Sbjct: 352 SAMITMYSRCGRLDYATRVFESID-DPDAVAWTAIIA 387



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 157/337 (46%), Gaps = 23/337 (6%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H  I+K G   +V +   L++ YV+  +L SA+K F+ + + N VSW+ +++GY   
Sbjct: 232 RQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQM 291

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   EA K F+ +      +N +   S+ +AC     + F  G Q H   +KS+      
Sbjct: 292 GEFEEALKTFESLRTRSVDINSFTYTSIFQACS--ALADFNSGAQAHADAIKSSLVAYQH 349

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
             + +I MY  C    D A R+FE I+  D ++W +II+ Y+ +G+     KLF RMQ  
Sbjct: 350 GESAMITMYSRC-GRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDC 408

Query: 185 GFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           G R    PN  TF +++TA   S  V+ G   L+   +M    G+ + +     +V  ++
Sbjct: 409 GVR----PNAVTFIAVLTACSHSGLVIEGRQYLE---SMSSNYGVATTIDHYDCMVDIYS 461

Query: 243 RLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG---- 296
           R G    A ++   M    + +S   L+ G    + +  G L    LF +          
Sbjct: 462 RAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYIL 521

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKD-----SVSWNTM 328
           + N+YA  G   ++ +V + M  ++     S SW T+
Sbjct: 522 MFNLYASFGKWKEAANVRKMMAERNLRKELSCSWITV 558


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 256/708 (36%), Positives = 385/708 (54%), Gaps = 58/708 (8%)

Query: 278  VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
            +H   +++G    +   N L+ +YAK   +  ++ +F  +  +++ +W  +ISG  + G 
Sbjct: 311  LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370

Query: 338  YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
             E     F  M+  G   + ++L S L  C+    + LG+ +H   L+ G+D DV + N+
Sbjct: 371  SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430

Query: 398  LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR----- 452
            +L LY          ++F LM E D VSWN +IGA+     L +  V+  LDM R     
Sbjct: 431  ILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAY-----LRAGDVEKSLDMFRRLPYK 485

Query: 453  --AGWSP----------------------------NGVTFINILAAASSFSMGKLGHQVH 482
                W+                             + VTF   L  ASS S  +LG Q+H
Sbjct: 486  DVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLH 545

Query: 483  AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF------------ARMSERRDE---V 527
              V+K+   ++  I ++L+  Y KCG MD    I             AR+S +  +   V
Sbjct: 546  GMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIV 605

Query: 528  SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
            SW SM+SGY+ N      +     M++    +D  T  T++SACA+   LE G  VHA  
Sbjct: 606  SWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYV 665

Query: 588  VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
             +     D  +GS+L+DMYSK G +D A   F      N+  W SMISGYA HG G  A+
Sbjct: 666  QKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAI 725

Query: 648  TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDL 707
             LF +M   G +P+ VTF+GVL+ACSHAGL++EG ++F+ M   Y + P +E  + MVDL
Sbjct: 726  GLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDL 785

Query: 708  LGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAV 767
             GRAG L K + FI K  I+  + +W++ L + CR + +  E+G+  + ML ++ P +  
Sbjct: 786  YGRAGHLTKTKNFIFKNGISHLTSVWKSFLSS-CRLH-KNVEMGKWVSEMLLQVAPSDPG 843

Query: 768  NYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDL 827
             YVLL+NM AS  +W++ A+ R  M +  VKK+ G SW+ +KD +H FV GD SHP+ D 
Sbjct: 844  AYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDE 903

Query: 828  IYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIR 886
            IY  L  L  ++++ GY    K  + D+E E  E L+S+HSEK+AV F ++   ++ PIR
Sbjct: 904  IYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIR 963

Query: 887  IMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            I+KNLR+C DCH+  K+ S+++ REI++RD +RFHHF  G CSCGDYW
Sbjct: 964  IIKNLRICTDCHNFIKYASQLLDREIIVRDIHRFHHFKHGSCSCGDYW 1011



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 135/546 (24%), Positives = 245/546 (44%), Gaps = 58/546 (10%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K+G    +   N L+ +Y +  ++A A KLFDE+P RN+ +W  ++SG+   G 
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           S     +F+EM   G   N+Y L SVL+ C     +  + G  VH  +L++    D ++ 
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCSL--DNNLQLGKGVHAWMLRNGIDVDVVLG 428

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N ++ +Y  C +  + A R+FE +   D++SWN +I  Y + GD      +F R+     
Sbjct: 429 NSILDLYLKC-KVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRL----- 482

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
                             Y  V+S + ++  +L    +   L  LY            G 
Sbjct: 483 -----------------PYKDVVSWNTIVDGLLQCGYERHALEQLYC-------MVECGT 518

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
            + A      +I  + +S   L      G+++HG +++ G      + + LV MY KCG 
Sbjct: 519 EFSAVTFSIALILASSLSHVEL------GRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGR 572

Query: 307 IDDSRSVFR----FMIGKDS------------VSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           +D +  + R     ++ K +            VSW +M+SG   NG YE+ +  F  M R
Sbjct: 573 MDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVR 632

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
           + ++    ++ + +S+CA+ G +  G+ +H    K+G   D  V ++L+ +Y+ +G L  
Sbjct: 633 ELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDD 692

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
              VF    E + V W S+I  +A        A+  + +M   G  PN VTF+ +L A S
Sbjct: 693 AWMVFRQSNEPNIVMWTSMISGYA-LHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACS 751

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
              + + G + + +++K        +E+  +++  YG+ G +   +    +         
Sbjct: 752 HAGLIEEGCR-YFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSV 810

Query: 529 WNSMIS 534
           W S +S
Sbjct: 811 WKSFLS 816


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/585 (40%), Positives = 359/585 (61%), Gaps = 7/585 (1%)

Query: 352 GLMSSNFSLISTL-SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
           G +  + +L +TL   C  LG +  G+ +H   L      D+ + N+LL +YA  G L  
Sbjct: 68  GSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEG 127

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
             ++F  MP  D VSW S+I  +A ++   S+A+  +  M   G  PN  T  +++    
Sbjct: 128 ARRLFDEMPHRDMVSWTSMITGYAQNDR-ASDALLLFPRMLSDGAEPNEFTLSSLVKCCG 186

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
             +    G Q+HA   KY   +   + ++L+  Y +CG + +   +F ++   ++EVSWN
Sbjct: 187 YMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLG-CKNEVSWN 245

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           ++I+GY       +A+ L   M + G R   FT++ +LS+C+S+  LE+G  +HA  +++
Sbjct: 246 ALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKS 305

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
             +    +G+ L+ MY+K G I  A + FD +   +V S NSM+ GYA+HG G +A   F
Sbjct: 306 SQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQF 365

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
            +M   G  P+ +TF+ VL+ACSHA L+DEG KH+  + + Y + P++  ++ +VDLLGR
Sbjct: 366 DEMIRFGIEPNDITFLSVLTACSHARLLDEG-KHYFGLMRKYNIEPKVSHYATIVDLLGR 424

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
           AG LD+ + FI +MPI P   IW  +LGA      + TE+G  AA  +FE++P     + 
Sbjct: 425 AGLLDQAKSFIEEMPIEPTVAIWGALLGA--SKMHKNTEMGAYAAQRVFELDPSYPGTHT 482

Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
           LLAN+YAS G+WEDVAK RK MK++ VKKE  CSWV +++ VHVFVA D +HP+K+ I++
Sbjct: 483 LLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHK 542

Query: 831 KLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMK 889
             ++LNQK+++ GYVP T   L  ++ + KE  + YHSEK+A++F L        IRIMK
Sbjct: 543 MWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMK 602

Query: 890 NLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           N+RVCGDCHSA K++S +V REI++RD+NRFHHF DG CSCGDYW
Sbjct: 603 NIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 193/369 (52%), Gaps = 3/369 (0%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           ++GK VH +++ S     + + N L+ MYA+CG+++ +R +F  M  +D VSW +MI+G 
Sbjct: 91  KEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGY 150

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            QN    +A++ F  M  DG   + F+L S +  C  +     G+QIH    K G  S+V
Sbjct: 151 AQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNV 210

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V ++L+ +YA  GYL   + VF  +   ++VSWN++I  +A  +    EA+  ++ M+R
Sbjct: 211 FVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYA-RKGEGEEALALFVRMQR 269

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G+ P   T+  +L++ SS    + G  +HA ++K +      + N LL  Y K G + D
Sbjct: 270 EGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRD 329

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
            EK+F ++  + D VS NSM+ GY  + L  +A      M++ G   +  TF +VL+AC+
Sbjct: 330 AEKVFDKLV-KVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACS 388

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWN 631
               L+ G        +  +E  V   + +VD+  + G +D A  F + MP+   V  W 
Sbjct: 389 HARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWG 448

Query: 632 SMISGYARH 640
           +++     H
Sbjct: 449 ALLGASKMH 457



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 203/434 (46%), Gaps = 74/434 (17%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K+ KL H  +L   F +D+ + N+L+ +Y R G L  A +LFDEMP R+ VSW  +++GY
Sbjct: 91  KEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGY 150

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                +++A  +F  M+  G   N + L S+++ C     + +  G Q+H    K     
Sbjct: 151 AQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYM--ASYNCGRQIHACCWKYGCHS 208

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V + L+ MY  C    + A  +F+++  ++ +SWN++I+ Y+++G+      LF RM
Sbjct: 209 NVFVGSSLVDMYARCGYLGE-AMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRM 267

Query: 182 QREGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           QREG+R    P E+T+ +L+++  S   +  G +L   ++   +K  L+   YVG+ L+ 
Sbjct: 268 QREGYR----PTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQK--LVG--YVGNTLLH 319

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVN 299
            +A+ G+   A K+F+++++ +VVS N ++ G                            
Sbjct: 320 MYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIG---------------------------- 351

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
            YA+ G            +GK+                   A   F  M R G+  ++ +
Sbjct: 352 -YAQHG------------LGKE-------------------AAQQFDEMIRFGIEPNDIT 379

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
            +S L++C+    +  G+   G   K  ++  VS    ++ L   AG L +       MP
Sbjct: 380 FLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMP 439

Query: 420 EHDQVS-WNSVIGA 432
               V+ W +++GA
Sbjct: 440 IEPTVAIWGALLGA 453



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 162/345 (46%), Gaps = 42/345 (12%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK--------------- 274
           DL + ++L+  +AR G+   AR++F++M  +++VS   ++ G  +               
Sbjct: 108 DLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRML 167

Query: 275 --------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
                                     G+++H    + G    V VG+ LV+MYA+CG + 
Sbjct: 168 SDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLG 227

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
           ++  VF  +  K+ VSWN +I+G  + G  EEA+  F  M+R+G   + F+  + LSSC+
Sbjct: 228 EAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCS 287

Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
           S+G +  G+ +H   +K        V N LL +YA +G +    KVF  + + D VS NS
Sbjct: 288 SMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNS 347

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
           ++  +A    L  EA + + +M R G  PN +TF+++L A S   +   G      + KY
Sbjct: 348 MLIGYA-QHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKY 406

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           N+  + +    ++   G+ G +D  +     M        W +++
Sbjct: 407 NIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALL 451



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 159/327 (48%), Gaps = 21/327 (6%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +  H    K+G   +VF+ ++L+++Y R G L  A  +FD++  +N VSW  +++GY  
Sbjct: 194 GRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYAR 253

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           KG   EA  +F  M R G+    +   ++L +C   G    + G  +H  ++KS+Q   G
Sbjct: 254 KGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMG--CLEQGKWLHAHLMKSSQKLVG 311

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V N L+ MY       D A ++F+++   D++S NS++  Y+Q G      + F  M  
Sbjct: 312 YVGNTLLHMYAKSGSIRD-AEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEM-- 368

Query: 184 EGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
              R+ ++PN+ TF S++TA +++ +L      +    +++K  +   +   + +V    
Sbjct: 369 --IRFGIEPNDITFLSVLTACSHARLLDEG---KHYFGLMRKYNIEPKVSHYATIVDLLG 423

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGR---RKGKEVHGYLIRSGLFDMVAVGNG--- 296
           R G    A+   E+M  +  V++ G + G     K  E+  Y  +  +F++     G   
Sbjct: 424 RAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQR-VFELDPSYPGTHT 482

Query: 297 -LVNMYAKCGTIDDSRSVFRFMIGKDS 322
            L N+YA  G  +D   V + M  KDS
Sbjct: 483 LLANIYASAGRWEDVAKVRKIM--KDS 507


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 240/630 (38%), Positives = 367/630 (58%), Gaps = 23/630 (3%)

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS----SCASLGWIMLGQQI 379
           SW   I      G +  AI  F  MR     ++  S++++L     SCA+LG   LG  +
Sbjct: 21  SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80

Query: 380 HGEGLKLGLDSDVSVSNALLSLY--------------ADAGYLSRCLKVFFLMPEHDQVS 425
           H   L+ G  +D   +NALL+LY                A  L    KVF  MPE D VS
Sbjct: 81  HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVS 140

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           WN+++   A+S     EA+    +M R G  P+  T  ++L   +  +  + G ++H   
Sbjct: 141 WNTLVLGCAES-GRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFA 199

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
            +    ++  + ++L+  Y  C   D   K+F  +  R D + WNSM++G   N  + +A
Sbjct: 200 TRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR-DAILWNSMLAGCAQNGSVDEA 258

Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
           + L   M+  G +    TF++++ AC ++A+L  G ++HA  +R   + +V I S+L+DM
Sbjct: 259 LGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDM 318

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
           Y KCG +  A R FD +   ++ SW +MI G+A HG   +AL LF +M+L    P+H+TF
Sbjct: 319 YCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITF 378

Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
           + VL+ACSHAGLVD+G+K+F SMS  YG++P LE  + + D LGR G+L++   FI+ M 
Sbjct: 379 LAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMK 438

Query: 726 ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDV 785
           I P + +W T+L AC     + T L  + A  +F++EP++  ++++L+N Y+S G+W + 
Sbjct: 439 IKPTASVWSTLLRAC--KVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEA 496

Query: 786 AKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
           A  RK+M++  ++KE  CSW+ +K+  HVFVA D+SHP  + I + L   +++M   GYV
Sbjct: 497 AHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYV 556

Query: 846 PQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFI 904
           P T     D+E E K  ++  HSEK+A+ F +++      IR+MKNLRVC DCH+  KFI
Sbjct: 557 PNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHTVTKFI 616

Query: 905 SKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           SKIVGREIV+RD+NRFHHF DG CSCGD+W
Sbjct: 617 SKIVGREIVMRDANRFHHFKDGICSCGDFW 646



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 203/434 (46%), Gaps = 42/434 (9%)

Query: 242 ARLGNFYYARKIFEQMIQKN--------VVSMNGLMEG------RRKGKEVHGYLIRSGL 287
           A  G+F++A  +F +M   +        + S+ G ++       R  G  +H   +RSG 
Sbjct: 30  ASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASLHALALRSGA 89

Query: 288 FDMVAVGNGLVNMYAKCG--------------TIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           F      N L+N+Y K                 ++  R VF  M  KD VSWNT++ G  
Sbjct: 90  FADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSWNTLVLGCA 149

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           ++G + EA+     M RDG    +F+L S L   A    +  G ++HG   + G   DV 
Sbjct: 150 ESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVF 209

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V ++L+ +YA+       +KVF  +P  D + WNS++   A + + V EA+  +  M  +
Sbjct: 210 VGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGS-VDEALGLFRRMLHS 268

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G  P  VTF +++ A  + +   LG Q+HA VI+        I ++L+  Y KCG +   
Sbjct: 269 GIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIA 328

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            +IF R+ +  D VSW +MI G+  +    +A+ L   M     + +H TF  VL+AC+ 
Sbjct: 329 RRIFDRI-QSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSH 387

Query: 574 VATLERG------MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
              +++G      M  H  G+   LE      +AL D   + G+++ A  F   M ++  
Sbjct: 388 AGLVDKGWKYFNSMSDHY-GIVPSLEHH----AALADTLGRPGKLEEAYNFISGMKIKPT 442

Query: 628 YS-WNSMISGYARH 640
            S W++++     H
Sbjct: 443 ASVWSTLLRACKVH 456



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 147/303 (48%), Gaps = 26/303 (8%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGD--------------LASASKLFDEMPDRNSV 52
            H   L+ G   D F  N L+N+Y ++                L S  K+FDEMP+++ V
Sbjct: 80  LHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVV 139

Query: 53  SWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHC 112
           SW  +V G    G   EA  + +EM R G   + + L SVL    E   +  + GM++H 
Sbjct: 140 SWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEG--ADVRRGMELHG 197

Query: 113 LVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTI 172
              ++    D  V + LI MY +C   TD + ++F+ +  RD I WNS+++  +Q G   
Sbjct: 198 FATRNGFHDDVFVGSSLIDMYANCTR-TDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVD 256

Query: 173 SVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLY 232
               LF RM   G    +KP   TF SLI A  +  L+   L +Q+ A V + G   +++
Sbjct: 257 EALGLFRRMLHSG----IKPMPVTFSSLIPACGN--LASLLLGKQLHAYVIRGGFDGNVF 310

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA 292
           + S+L+  + + GN   AR+IF+++   ++VS   ++ G          L+   LFD + 
Sbjct: 311 ISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALV---LFDRME 367

Query: 293 VGN 295
           +GN
Sbjct: 368 LGN 370



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 127/256 (49%), Gaps = 14/256 (5%)

Query: 13  KHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACK 72
           ++GF  DVF+ ++LI++Y        + K+FD +P R+++ W  +++G    G  +EA  
Sbjct: 201 RNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALG 260

Query: 73  MFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG--LVSNVLI 130
           +F+ M+ +G         S++ AC     +    G Q+H  V++    FDG   +S+ LI
Sbjct: 261 LFRRMLHSGIKPMPVTFSSLIPACGNL--ASLLLGKQLHAYVIRGG--FDGNVFISSSLI 316

Query: 131 AMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSL 190
            MY  C  +   ARRIF+ I++ D++SW ++I  ++  G       LF RM+      +L
Sbjct: 317 DMYCKC-GNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELG----NL 371

Query: 191 KPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
           KPN  TF +++TA +++ ++   +  +   +M    G++  L   +AL     R G    
Sbjct: 372 KPNHITFLAVLTACSHAGLVDKGW--KYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEE 429

Query: 250 ARKIFEQMIQKNVVSM 265
           A      M  K   S+
Sbjct: 430 AYNFISGMKIKPTASV 445



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 51/96 (53%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  +++ GF  +VF+ ++LI++Y + G+++ A ++FD +   + VSW  ++ G+   
Sbjct: 294 KQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALH 353

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G + EA  +F  M       N     +VL AC   G
Sbjct: 354 GPAREALVLFDRMELGNLKPNHITFLAVLTACSHAG 389


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 254/652 (38%), Positives = 389/652 (59%), Gaps = 21/652 (3%)

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           N L++ YAK   ++ +  +F  M   DSVS+NT+I+   + G  + A   F  MR   L 
Sbjct: 78  NTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLD 137

Query: 355 SSNFSLISTLSSCA-SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
              F+L   +++C  ++G I   +Q+H   +  GLDS VSV NAL++ Y+  G+L    +
Sbjct: 138 MDGFTLSGIITACGINVGLI---RQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARR 194

Query: 414 VF-FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
           +F +L  + D+VSWNS++ A+       S+A++ YL+M   G   +  T  ++L A ++ 
Sbjct: 195 IFHWLSEDRDEVSWNSMVVAYMQHRE-GSKALELYLEMTVRGLIVDIFTLASVLTAFTNV 253

Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE-MDDCEKIFARMSERRDEVSWNS 531
                G Q HA++IK      + + + L+  Y KCG  M DC K+F  +S   D V WN+
Sbjct: 254 QDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP-DLVLWNT 312

Query: 532 MISGY-IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           MISGY ++ +L  +A+     +   G R D  +   V+SAC+++++  +G +VH   ++ 
Sbjct: 313 MISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKL 372

Query: 591 CLEFD-VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
            +  + + + +AL+ MYSKCG +  A   FD MP  N  S+NSMI+GYA+HG G ++L L
Sbjct: 373 DIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHL 432

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           F +M      P ++TF+ VL+AC+H G V++G  +F  M Q +G+ P+   FSCM+DLLG
Sbjct: 433 FQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLG 492

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVN 768
           RAG+L + E  I  +P  P    W  +LGAC    N    EL  KAAN L +++P NA  
Sbjct: 493 RAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGN---VELAIKAANRLLQLDPLNAAP 549

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
           YV+LAN+Y+  G+ +D A  RK M++  VKK+ GCSW+ +   +H+FVA D  HP    I
Sbjct: 550 YVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKI 609

Query: 829 YEKLKELNQKMRDAGYVPQTKFALF---DLEPESKEDL-VSYHSEKIAVAFVL--TRNSK 882
            E L+E+ +K++  GY P+ + A     D   + +E+L + +HSEK+AV+F L  TR  +
Sbjct: 610 QEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTREGE 669

Query: 883 LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            PI + KNLR+C DCH+A K+IS++V REI +RDS+RFH F DG+CSCG YW
Sbjct: 670 -PILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 216/445 (48%), Gaps = 59/445 (13%)

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           D +V   N L+S YA   Y+    ++F  MP+ D VS+N++I A+A        A + +L
Sbjct: 71  DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYA-RRGDTQPAFQLFL 129

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
           +MR A    +G T   I+ A    ++G L  Q+HA  +   + +  ++ NAL++ Y K G
Sbjct: 130 EMREAFLDMDGFTLSGIITAC-GINVG-LIRQLHALSVVTGLDSYVSVGNALITSYSKNG 187

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
            + +  +IF  +SE RDEVSWNSM+  Y+ +    KA+ L   M  RG  +D FT A+VL
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR-FFDLMPVRNV 627
           +A  +V  L  G++ HA  +++    +  +GS L+D+YSKCG      R  FD +   ++
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDL 307

Query: 628 YSWNSMISGYARHGH-GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
             WN+MISGY+ +    D+AL  F Q++  G  PD  + V V+SACS+     +G     
Sbjct: 308 VLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQG----- 362

Query: 687 SMSQVYGLIPQLEQFS-------CMVDLLGRAGELDKIEEFINKMP-------------- 725
              QV+GL  +L+  S        ++ +  + G L   +   + MP              
Sbjct: 363 --RQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGY 420

Query: 726 --------------------ITPNSLIWRTVLGACCRANCRKTELGRKAANML---FEME 762
                                TP ++ + +VL AC  A+  + E G+   NM+   F +E
Sbjct: 421 AQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAAC--AHTGRVEDGKIYFNMMKQKFGIE 478

Query: 763 PQNAVNYVLLANMYASGGKWEDVAK 787
           P+ A ++  + ++    GK  +  +
Sbjct: 479 PE-AGHFSCMIDLLGRAGKLSEAER 502



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 122/516 (23%), Positives = 223/516 (43%), Gaps = 103/516 (19%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASK-------------------- 41
           +  K  H   +K       +L N  + +Y +   L++A +                    
Sbjct: 25  RTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAY 84

Query: 42  -----------LFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
                      LFDEMP  +SVS+  +++ Y  +G +  A ++F EM  A   ++ + L 
Sbjct: 85  AKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLS 144

Query: 91  SVLRACQECGPSGFKFGM--QVHCLVLKSNQTFDGLVSNVLIAMY---GSCLESTDCARR 145
            ++ AC      G   G+  Q+H L + +       V N LI  Y   G   E    ARR
Sbjct: 145 GIITAC------GINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKE----ARR 194

Query: 146 IFEEI-ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA- 203
           IF  + E RD +SWNS++  Y Q  +     +L+  M   G    L  + +T  S++TA 
Sbjct: 195 IFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRG----LIVDIFTLASVLTAF 250

Query: 204 -AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN-FYYARKIFEQMIQKN 261
                +L G     Q  A + K+G   + +VGS L+  +++ G      RK+F+++   +
Sbjct: 251 TNVQDLLGG----LQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPD 306

Query: 262 VVSMNGLMEG------------------------------------------RRKGKEVH 279
           +V  N ++ G                                            +G++VH
Sbjct: 307 LVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVH 366

Query: 280 GYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           G  ++  +  + ++V N L+ MY+KCG + D++++F  M   ++VS+N+MI+G  Q+G  
Sbjct: 367 GLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMG 426

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ-QIHGEGLKLGLDSDVSVSNA 397
            +++  F  M       +N + IS L++CA  G +  G+   +    K G++ +    + 
Sbjct: 427 FQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSC 486

Query: 398 LLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           ++ L   AG LS   ++   +P +     W++++GA
Sbjct: 487 MIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGA 522



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 4/130 (3%)

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           +F   L  C +   L  G  +HA  +++ +     + +  + +YSKC R+  A R FD  
Sbjct: 10  SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
              NV+S+N++IS YA+  + + A  LF +M    P PD V++  +++A +  G     F
Sbjct: 70  HDCNVFSFNTLISAYAKESYVEVAHQLFDEM----PQPDSVSYNTLIAAYARRGDTQPAF 125

Query: 683 KHFKSMSQVY 692
           + F  M + +
Sbjct: 126 QLFLEMREAF 135


>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 259/748 (34%), Positives = 407/748 (54%), Gaps = 84/748 (11%)

Query: 232 YVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMV 291
           YV + L++ +AR G    AR++F+ M   N+ + N L+                      
Sbjct: 46  YVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSA-------------------- 85

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY------------E 339
                     A    + D   +F  M  +D+VS+N +I+G    G              E
Sbjct: 86  ---------LAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLRE 136

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           EA+++   +R      S  ++   + + ++LG   LG+Q+H + ++LG  +     + L+
Sbjct: 137 EAVVDGARVR-----PSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLV 191

Query: 400 SLYADAGY-------------------------LSRC------LKVFFLMPEHDQVSWNS 428
            +YA  G                          L RC        VF  M + D ++W +
Sbjct: 192 DMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTT 251

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
           ++     +  L SEA+  +  MR  G   +  TF +IL A  + +  + G Q+HA  I+ 
Sbjct: 252 MVTGLTQN-GLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRT 310

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNL 548
                  + +AL+  Y KC  +   E +F RM+ + + +SW +MI GY  N    +A+ +
Sbjct: 311 LYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCK-NIISWTAMIVGYGQNGCGEEAVRV 369

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
              M   G + + FT  +V+S+CA++A+LE G + H   + + L   + + SALV +Y K
Sbjct: 370 FSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGK 429

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
           CG I+ A R FD MP  +  S+ +++SGYA+ G   + + LF +M L G  P+ VTF+GV
Sbjct: 430 CGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGV 489

Query: 669 LSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITP 728
           LSACS +GLV++G  +F SM Q +G++   + ++CM+DL  R+G L + EEFI +MP  P
Sbjct: 490 LSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCP 549

Query: 729 NSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
           +++ W T+L AC  R +    E+G+ AA  L + +PQN  +YVLL +M+AS G+W +VA 
Sbjct: 550 DAIGWATLLSACRLRGD---MEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVAL 606

Query: 788 ARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQ 847
            R+ M++ +VKKE GCSW+  K+ VH+F A D+SHP    IYEKL+ LN KM + GY P 
Sbjct: 607 LRRGMRDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPD 666

Query: 848 TKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISK 906
               L D+    K  ++S HSEK+A+AF ++    ++PIR++KNLRVC DCH+A KFISK
Sbjct: 667 VSSVLHDVADAEKVHMLSNHSEKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKFISK 726

Query: 907 IVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           I GR+I++RD+ RFH F++G CSCGD+W
Sbjct: 727 ITGRDILVRDAVRFHKFSNGICSCGDFW 754



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 144/569 (25%), Positives = 250/569 (43%), Gaps = 86/569 (15%)

Query: 9   LQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSN 68
           L+ L H      ++ N L+  Y R G L  A +LFD MPD N  +   ++S   H  +  
Sbjct: 36  LRTLPH--PPPTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHARLLP 93

Query: 69  EACKMFKEMVR----------AGF---------------LL-------------NRYALG 90
           +  ++F  M +          AGF               LL             +R  + 
Sbjct: 94  DMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMS 153

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
            ++ A    G      G QVHC +++          + L+ MY       D A+R+F+E+
Sbjct: 154 GMVMAASALGDRAL--GRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGD-AKRVFDEM 210

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG---FRYSLKPNEYTFGSLITAAYSS 207
             ++++ +N++I+             L  +M  E    F   +  +  T+ +++T    +
Sbjct: 211 VVKNVVMYNTMITGL-----------LRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQN 259

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
            L    L   +   ++  G+  D Y   ++++                           G
Sbjct: 260 GLQSEAL--DVFRRMRAEGVGIDQYTFGSILTAC-------------------------G 292

Query: 268 LMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
            +    +GK++H Y IR+     + VG+ LV+MY+KC +I  + +VFR M  K+ +SW  
Sbjct: 293 ALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTA 352

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           MI G  QNGC EEA+  F  M+ DG+  ++F+L S +SSCA+L  +  G Q H   L  G
Sbjct: 353 MIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSG 412

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
           L   ++VS+AL++LY   G +    ++F  MP HDQVS+ +++  +A       E +  +
Sbjct: 413 LRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQF-GKAKETIDLF 471

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGK 506
             M   G  PNGVTFI +L+A S   + + G    H+    + +         ++  Y +
Sbjct: 472 EKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSR 531

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISG 535
            G + + E+   +M    D + W +++S 
Sbjct: 532 SGRLKEAEEFIRQMPRCPDAIGWATLLSA 560



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 113/459 (24%), Positives = 199/459 (43%), Gaps = 104/459 (22%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDE---------------------- 45
           H QI++ GF    F  + L+++Y ++G +  A ++FDE                      
Sbjct: 172 HCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMV 231

Query: 46  ---------MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRAC 96
                    M DR+S++W  +V+G T  G+ +EA  +F+ M   G  +++Y  GS+L AC
Sbjct: 232 EEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTAC 291

Query: 97  QECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLI 156
                S  + G Q+H   +++    +  V + L+ MY  C  S   A  +F  +  +++I
Sbjct: 292 GALAAS--EEGKQIHAYTIRTLYDGNIFVGSALVDMYSKC-RSIRLAEAVFRRMTCKNII 348

Query: 157 SWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYL 214
           SW ++I  Y Q G      ++FS MQ +G    +KPN++T GS+I+  A  +S+  G+  
Sbjct: 349 SWTAMIVGYGQNGCGEEAVRVFSEMQTDG----IKPNDFTLGSVISSCANLASLEEGA-- 402

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK 274
             Q   M   +GL   + V SALV+ + + G+   A ++F++M   + VS   L+ G   
Sbjct: 403 --QFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSG--- 457

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
                                     YA+ G   ++  +F  M          ++ G+  
Sbjct: 458 --------------------------YAQFGKAKETIDLFEKM----------LLKGVKP 481

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG     +++ C+  R GL+    S   ++            QQ HG  L   LD   + 
Sbjct: 482 NGVTFIGVLSACS--RSGLVEKGCSYFHSM------------QQDHGIVL---LDDHYT- 523

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPE-HDQVSWNSVIGA 432
              ++ LY+ +G L    +    MP   D + W +++ A
Sbjct: 524 --CMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSA 560



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 130/262 (49%), Gaps = 18/262 (6%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S++ K  H   ++  +  ++F+ + L+++Y +   +  A  +F  M  +N +SW  ++ G
Sbjct: 297 SEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVG 356

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y   G   EA ++F EM   G   N + LGSV+ +C     +  + G Q HC+ L S   
Sbjct: 357 YGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANL--ASLEEGAQFHCMALVSGLR 414

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
               VS+ L+ +YG C  S + A R+F+E+   D +S+ +++S Y+Q G       LF +
Sbjct: 415 PYITVSSALVTLYGKC-GSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEK 473

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVL-----SGSYLLQQILAMVKKAGLLSDLYVGS 235
           M  +G    +KPN  TF  +++A   S L     S  + +QQ   +V    LL D Y  +
Sbjct: 474 MLLKG----VKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIV----LLDDHY--T 523

Query: 236 ALVSGFARLGNFYYARKIFEQM 257
            ++  ++R G    A +   QM
Sbjct: 524 CMIDLYSRSGRLKEAEEFIRQM 545



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 11/169 (6%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           FH   L  G    + + + L+ +Y + G +  A +LFDEMP  + VS+  +VSGY   G 
Sbjct: 404 FHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGK 463

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQ-----ECGPSGFKFGMQVHCLVLKSNQTF 121
           + E   +F++M+  G   N      VL AC      E G S F    Q H +VL  +   
Sbjct: 464 AKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHY- 522

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD 170
                  +I +Y       +    I +     D I W +++S    RGD
Sbjct: 523 -----TCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGD 566


>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
 gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
          Length = 706

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/682 (36%), Positives = 387/682 (56%), Gaps = 24/682 (3%)

Query: 260 KNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
           ++   +  L EGRR    +H  + R GL   V V N LV MY KCG+++++R VF     
Sbjct: 42  QSCARLGALAEGRR----IHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPA 97

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC-ASLGWIMLGQQ 378
           K+  SW  +I+   Q+G  +EA+  F  M + G+   + S  + +++C A   ++  G+ 
Sbjct: 98  KNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRA 157

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           +H    + G    V  + +L+S+Y+  G L   +K F  M E + VSWN++I AFA+   
Sbjct: 158 LHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRR 217

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
            + EA++    M   G     VT+I +++A    S  K    +H  +++     +  + N
Sbjct: 218 GL-EALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGF--DQDVVN 274

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
            +L+ YGKCG + D E +F  MS+  D ++WN+MI+ Y  +    +A+     M + G  
Sbjct: 275 VILNMYGKCGCLQDAEAMFKSMSQP-DVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVV 333

Query: 559 LDHFTFATVLSACASVATLERGMEVHA-CGVRACLEFDVV-IGSALVDMYSKCGRIDYAS 616
            D +T+ +V+ ACA++  +E G +VH   G RA   F V  + ++LV+MY KCG +D A 
Sbjct: 334 PDDYTYVSVIDACATLGDMEVGKQVHRRLGDRA---FQVTELANSLVNMYGKCGILDVAR 390

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
             FD    +   +WN+MI  YA+H H  +A  LF  M+LDG  P ++TF+ VLSAC++AG
Sbjct: 391 SIFD-KTAKGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAG 449

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
           L +E   +F  M Q +G+ P    + CMV+ LG+AG L   E  I  MP  P+ L W + 
Sbjct: 450 LPEEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSF 509

Query: 737 LGACCRANCRK---TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMK 793
           L     ANCR     + G+ AA     ++P+ +  YV LA ++A  G +++ ++ RK M 
Sbjct: 510 L-----ANCRSHGDMKRGKFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLML 564

Query: 794 EAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALF 853
           +  ++K AG S + +   V+ F AGD+S+P    I+++LK L+++M+ AGY P       
Sbjct: 565 DRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKRAGYDPDMTHVAH 624

Query: 854 DLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREI 912
           D+E   KE L+  HSE++A+AF +++ +   P+RIMKNLRVCGDCH+  K  SKI  REI
Sbjct: 625 DVEAGQKEPLLFAHSERLAIAFGIISTSQGTPLRIMKNLRVCGDCHAMTKLTSKITRREI 684

Query: 913 VLRDSNRFHHFNDGKCSCGDYW 934
           ++RDSNRFHHF +G CSC D+W
Sbjct: 685 IVRDSNRFHHFKNGSCSCKDFW 706



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 207/417 (49%), Gaps = 17/417 (4%)

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           +T++S   Q G    AI +    R+D  +      +  + SCA LG +  G++IH    +
Sbjct: 7   STLLSKRQQLGQIAAAI-DALQKRKDADLKE---CVRVIQSCARLGALAEGRRIHQLIRR 62

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
           +GL SDV VSN L+ +Y   G L     VF   P  +  SW  +I   A       EA+ 
Sbjct: 63  VGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCA-QHGRSQEALA 121

Query: 446 YYLDMRRAGWSPNGVTF---INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
            + +M + G  P+ V+F   IN  +A   F     G  +HA + +Y   +      +L+S
Sbjct: 122 LFYEMLKQGIQPHSVSFTAAINACSAGPEFL--PAGRALHALLRRYGFQDAVVATTSLVS 179

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            Y KCG +++  K F  M+E  + VSWN+MI+ +  +    +A+  +  M   G R    
Sbjct: 180 MYSKCGSLEESVKTFESMTE-LNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSV 238

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           T+ T++SA    + L+    +H C +R   + DVV  + +++MY KCG +  A   F  M
Sbjct: 239 TYITLMSAYDQPSQLKSARYIHDCILRTGFDQDVV--NVILNMYGKCGCLQDAEAMFKSM 296

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
              +V +WN+MI+ Y++HGH  +AL  +  M+ +G +PD  T+V V+ AC+  G ++ G 
Sbjct: 297 SQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGK 356

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           +  + +      + +L   + +V++ G+ G LD      +K      S+ W  ++GA
Sbjct: 357 QVHRRLGDRAFQVTELA--NSLVNMYGKCGILDVARSIFDK--TAKGSVTWNAMIGA 409



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 127/516 (24%), Positives = 227/516 (43%), Gaps = 62/516 (12%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H  I + G   DV++ N L+ +Y + G L  A  +F+  P +N  SW  +++   
Sbjct: 52  EGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCA 111

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G S EA  +F EM++ G   +  +  + + AC   GP     G  +H L+ +      
Sbjct: 112 QHGRSQEALALFYEMLKQGIQPHSVSFTAAINAC-SAGPEFLPAGRALHALLRRYGFQDA 170

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            + +  L++MY  C  S + + + FE +   + +SWN++I+ +++    +   +   +M 
Sbjct: 171 VVATTSLVSMYSKC-GSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKMF 229

Query: 183 REGFR-----YSLKPNEYTFGSLITAA---YSSVLSGSY---LLQQILAMVKKAGLLS-- 229
            EG R     Y    + Y   S + +A   +  +L   +   ++  IL M  K G L   
Sbjct: 230 LEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQDVVNVILNMYGKCGCLQDA 289

Query: 230 ----------DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN------------- 266
                     D+   + +++ +++ G+   A + +E M ++ VV  +             
Sbjct: 290 EAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATL 349

Query: 267 GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
           G ME    GK+VH  L     F +  + N LVNMY KCG +D +RS+F     K SV+WN
Sbjct: 350 GDME---VGKQVHRRLGDRA-FQVTELANSLVNMYGKCGILDVARSIFD-KTAKGSVTWN 404

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            MI    Q+   ++A   F  MR DG   S  + +S LS+CA+ G   L ++ H   + +
Sbjct: 405 AMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAG---LPEEAHSYFVCM 461

Query: 387 GLDSDVSVSNA----LLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVS 441
             D  V         ++     AG LS    +   MP E D ++W S +           
Sbjct: 462 QQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLA---------- 511

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
              + + DM+R  ++  G   I+  A+    ++ ++
Sbjct: 512 -NCRSHGDMKRGKFAAKGAIRIDPEASTGYVALARI 546



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 2/224 (0%)

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRI 612
           +Q+ +  D      V+ +CA +  L  G  +H    R  L  DV + + LV MY KCG +
Sbjct: 26  LQKRKDADLKECVRVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSL 85

Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
           + A   F+  P +NV+SW  +I+  A+HG   +AL LF +M   G  P  V+F   ++AC
Sbjct: 86  EEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINAC 145

Query: 673 SHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI 732
           S         +   ++ + YG    +   + +V +  + G L++  +    M    N++ 
Sbjct: 146 SAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESM-TELNAVS 204

Query: 733 WRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMY 776
           W  ++ A      R  E  R    M  E     +V Y+ L + Y
Sbjct: 205 WNAMIAAFAEHR-RGLEALRTLQKMFLEGIRACSVTYITLMSAY 247


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/650 (37%), Positives = 380/650 (58%), Gaps = 18/650 (2%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMI--------GKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
           L+ +Y+K G +  +R++F              +S   NTM+      G   EAI  +  M
Sbjct: 64  LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           +R G+  +NF+    L  CAS    + G+ +HG+ ++ G  SD+ V  AL+ +YA  G +
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEI 183

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
               +VF  M   D V W ++I  +  +E  + +A+  +  M+  G+  + +T I++ +A
Sbjct: 184 GDAHEVFDRMLIRDVVCWTAMITLYEQAERPL-KALMLFRKMQEEGFLGDEITAISVASA 242

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
                 G++   VH   +      + ++ N+++  Y KCG ++    +F RM E R+ +S
Sbjct: 243 VGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRM-EERNGIS 301

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           WNSM+SGY  N     A++L   M       +  T   ++SAC+ + +   G ++H   +
Sbjct: 302 WNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVI 361

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFD--LMPVRNVYSWNSMISGYARHGHGDKA 646
            + ++ D  + +A++DMY KCG +D A   F+   +  R+V SWN +ISGY  HGHG +A
Sbjct: 362 SSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEA 421

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           L LFS+M+++G  P+ +TF  +LSACSHAGL+DEG K F  M+++  + P+++ ++CMVD
Sbjct: 422 LELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKL-SVRPEMKHYACMVD 480

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQN 765
           +LGRAG L++    I K+P  P+  +W  +L AC    N   TELG  AAN LF++EP++
Sbjct: 481 MLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGN---TELGEIAANNLFQLEPEH 537

Query: 766 AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
              YVL++N+YA+  KW++V   R+ MK   +KK A  S +     VH F   D+S P  
Sbjct: 538 TGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYY 597

Query: 826 DLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLP 884
             +Y K++ L  +M+  GYVP     L D+EPE KE L++YHSEK+AVAF ++  +  +P
Sbjct: 598 REVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMP 657

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           I++ KNLRVC DCH AFKFIS I GR+I++RD NRFHHF  G+CSCGDYW
Sbjct: 658 IQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 707



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 200/398 (50%), Gaps = 5/398 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+ VHG ++R+G    + V   LV+MYAKCG I D+  VF  M+ +D V W  MI+  +Q
Sbjct: 151 GEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQ 210

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
                +A+M F  M+ +G +    + IS  S+   LG   +   +HG  +  G   DVSV
Sbjct: 211 AERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSV 270

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            N+++ +YA  G + R   VF  M E + +SWNS++  +  +    ++A+  +  M+ + 
Sbjct: 271 GNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQN-GRPTDALSLFNQMQASE 329

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             PN VT + +++A S      LG ++H  VI   +  +TT+ NA++  Y KCG++D   
Sbjct: 330 CDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAV 389

Query: 515 KIFARMS-ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
           ++F       RD  SWN +ISGY  +    +A+ L   M   G   +  TF ++LSAC+ 
Sbjct: 390 EMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSH 449

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNS 632
              ++ G +  A   +  +  ++   + +VDM  + G ++ A R    +P R     W +
Sbjct: 450 AGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGA 509

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
           ++   A   HG+  L   +   L    P+H  +  ++S
Sbjct: 510 LL--LACRIHGNTELGEIAANNLFQLEPEHTGYYVLMS 545



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 198/418 (47%), Gaps = 50/418 (11%)

Query: 159 NSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQI 218
           N+++  Y+  G +     L+  MQR G    +  N +T+  ++    S +  G+   + +
Sbjct: 101 NTMLRAYANAGRSYEAIDLYIYMQRMG----VGVNNFTYPFVLKVCASEL--GAVFGEVV 154

Query: 219 LAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV--------------S 264
              V + G  SDL+V +ALV  +A+ G    A ++F++M+ ++VV               
Sbjct: 155 HGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERP 214

Query: 265 MNGLMEGRRKGKE---------------------------VHGYLIRSGLFDMVAVGNGL 297
           +  LM  R+  +E                           VHGY + +G    V+VGN +
Sbjct: 215 LKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSI 274

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           V MYAKCG ++ +R VF  M  ++ +SWN+M+SG  QNG   +A+  F  M+      + 
Sbjct: 275 VGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNP 334

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF-- 415
            + +  +S+C+ LG   LG+++H   +   +D D ++ NA++ +Y   G L   +++F  
Sbjct: 335 VTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNN 394

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
             + E D  SWN +I  +        EA++ +  M+  G  PN +TF +IL+A S   + 
Sbjct: 395 CELGERDVSSWNVLISGYG-VHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLI 453

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
             G +  A + K +V  E      ++   G+ G +++  ++  ++  R  +  W +++
Sbjct: 454 DEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALL 511



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 218/484 (45%), Gaps = 68/484 (14%)

Query: 5   KLFHLQILKHGFA-YDVFLCNTLINVYVRVGDLASASKLFD----------EMPDRNSVS 53
           KL H  +   GF  +       LI +Y ++GDL SA  LFD          + P  NS  
Sbjct: 42  KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAP--NSFL 99

Query: 54  WACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCL 113
              ++  Y + G S EA  ++  M R G  +N +    VL+ C      G  FG  VH  
Sbjct: 100 CNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVC--ASELGAVFGEVVHGQ 157

Query: 114 VLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTIS 173
           V+++    D  V   L+ MY  C E  D A  +F+ +  RD++ W ++I++Y Q    + 
Sbjct: 158 VVRTGFGSDLFVEAALVDMYAKCGEIGD-AHEVFDRMLIRDVVCWTAMITLYEQAERPLK 216

Query: 174 VFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYV 233
              LF +MQ EGF      +E T  S+ +A     L    +   +       G + D+ V
Sbjct: 217 ALMLFRKMQEEGFL----GDEITAISVASAV--GQLGDGRMAISVHGYAVLNGFIGDVSV 270

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------------------- 271
           G+++V  +A+ GN   AR +F++M ++N +S N ++ G                      
Sbjct: 271 GNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASEC 330

Query: 272 -------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
                              +  G+++H ++I S +     + N +++MY KCG +D +  
Sbjct: 331 DPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVE 390

Query: 313 VFRF--MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
           +F    +  +D  SWN +ISG   +G  +EA+  F  M+ +G+  ++ +  S LS+C+  
Sbjct: 391 MFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHA 450

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH--DQVSWNS 428
           G I  G++   +  KL +  ++     ++ +   AG+L+   ++   +P    D+V W +
Sbjct: 451 GLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEV-WGA 509

Query: 429 VIGA 432
           ++ A
Sbjct: 510 LLLA 513



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 179/389 (46%), Gaps = 32/389 (8%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            ++ H Q+++ GF  D+F+   L+++Y + G++  A ++FD M  R+ V W  +++ Y  
Sbjct: 151 GEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQ 210

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                +A  +F++M   GFL +     SV  A  + G    +  + VH   + +    D 
Sbjct: 211 AERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDG--RMAISVHGYAVLNGFIGDV 268

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V N ++ MY  C  + + AR +F+ +E R+ ISWNS++S Y+Q G       LF++MQ 
Sbjct: 269 SVGNSIVGMYAKC-GNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQA 327

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
                   PN  T  +LI  +  S L   +L +++   V  + +  D  + +A++  + +
Sbjct: 328 S----ECDPNPVT--ALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMK 381

Query: 244 LGNFYYARKIFE--QMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGLFDMVAVGNGLV 298
            G+   A ++F   ++ +++V S N L+ G      GKE      R  +  +        
Sbjct: 382 CGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFT 441

Query: 299 NMYAKC---GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMS 355
           ++ + C   G ID+ R  F  M  K SV        +    C  +       + R G ++
Sbjct: 442 SILSACSHAGLIDEGRKCFADMT-KLSVR-----PEMKHYACMVD------MLGRAGFLN 489

Query: 356 SNFSLISTLSSCAS---LGWIMLGQQIHG 381
             F LI  + S  S    G ++L  +IHG
Sbjct: 490 EAFRLIKKIPSRPSDEVWGALLLACRIHG 518


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 258/777 (33%), Positives = 429/777 (55%), Gaps = 57/777 (7%)

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
           VH  ++      D  +SN+LI +Y         AR++FE++  R+L+SW++++S  +  G
Sbjct: 66  VHGQIIVWGLELDTYLSNILINLYSRA-GGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124

Query: 170 ---DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
              +++ VF  F R +++       PNEY   S I A       G +++ Q+ + + K+G
Sbjct: 125 IYEESLVVFLEFWRTRKDS------PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSG 178

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------ 274
              D+YVG+ L+  + + GN  YAR +F+ + +K+ V+   ++ G  K            
Sbjct: 179 FDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFY 238

Query: 275 -----------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
                                        GK++H +++R GL    ++ N L++ Y KCG
Sbjct: 239 QLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCG 298

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            +  +  +F  M  K+ +SW T++SG  QN  ++EA+  F +M + GL    ++  S L+
Sbjct: 299 RVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILT 358

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           SCASL  +  G Q+H   +K  L +D  V+N+L+ +YA    L+   KVF +    D V 
Sbjct: 359 SCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVL 418

Query: 426 WNSVIGAFA--DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           +N++I  ++   ++  + EA+  + DMR     P+ +TF+++L A++S +   L  Q+H 
Sbjct: 419 FNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHG 478

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
            + KY +  +    +AL+  Y  C  + D   +F  M + +D V WNSM +GY+      
Sbjct: 479 LMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM-KVKDLVIWNSMFAGYVQQSENE 537

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +A+NL   +    +R D FTFA +++A  ++A+++ G E H   ++  LE +  I +AL+
Sbjct: 538 EALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALL 597

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           DMY+KCG  + A + FD    R+V  WNS+IS YA HG G KAL +  +M  +G  P+++
Sbjct: 598 DMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYI 657

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TFVGVLSACSHAGLV++G K F+ M + +G+ P+ E + CMV LLGRAG L+K  E I K
Sbjct: 658 TFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEK 716

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           MP  P +++WR++L  C +A     EL   AA M    +P+++ ++ +L+N+YAS G W 
Sbjct: 717 MPTKPAAIVWRSLLSGCAKAG--NVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWT 774

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
           +  K R+ MK   V KE G SW+ +   VH+F++ D+SH + + IYE L +L  ++R
Sbjct: 775 EAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831



 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 199/685 (29%), Positives = 328/685 (47%), Gaps = 55/685 (8%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H QI+  G   D +L N LIN+Y R G +  A K+F++MP+RN VSW+ +VS   H G+ 
Sbjct: 67  HGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIY 126

Query: 68  NEACKMFKEMVRA-GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            E+  +F E  R      N Y L S ++AC      G     Q+   ++KS    D  V 
Sbjct: 127 EESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVG 186

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
            +LI  Y     + D AR +F+ +  +  ++W ++IS   + G +    +LF ++  +  
Sbjct: 187 TLLIDFYLKD-GNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED-- 243

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
             ++ P+ Y   ++++A   S+L      +QI A + + GL  D  + + L+  + + G 
Sbjct: 244 --NVVPDGYILSTVLSAC--SILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------------- 274
              A K+F  M  KN++S   L+ G ++                                
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359

Query: 275 ---------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    G +VH Y I++ L +   V N L++MYAKC  + D+R VF      D V +
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLF 419

Query: 326 NTMISGLDQNGC---YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           N MI G  + G      EA+  F  MR   +  S  + +S L + ASL  + L +QIHG 
Sbjct: 420 NAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
             K GL+ D+   +AL+ +Y++   L     VF  M   D V WNS+   +   ++   E
Sbjct: 480 MFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQ-QSENEE 538

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           A+  +L+++ +   P+  TF N++ AA + +  +LG + H Q++K  +     I NALL 
Sbjct: 539 ALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLD 598

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            Y KCG  +D  K F   +  RD V WNS+IS Y ++    KA+ ++  MM  G   ++ 
Sbjct: 599 MYAKCGSPEDAHKAFDSAAS-RDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYI 657

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           TF  VLSAC+    +E G++     +R  +E +      +V +  + GR++ A    + M
Sbjct: 658 TFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKM 717

Query: 623 PVRN-VYSWNSMISGYARHGHGDKA 646
           P +     W S++SG A+ G+ + A
Sbjct: 718 PTKPAAIVWRSLLSGCAKAGNVELA 742



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 229/474 (48%), Gaps = 48/474 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  IL++G   D  L N LI+ YV+ G + +A KLF+ MP++N +SW  ++SGY   
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            +  EA ++F  M + G   + YA  S+L +C      G  FG QVH   +K+N   D  
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALG--FGTQVHAYTIKANLGNDSY 386

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V+N LI MY  C   TD AR++F+     D++ +N++I  YS+ G    + +  +  +  
Sbjct: 387 VTNSLIDMYAKCDCLTD-ARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDM 445

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
            FR  ++P+  TF SL+ A  S+ L+   L +QI  ++ K GL  D++ GSAL+  ++  
Sbjct: 446 RFRL-IRPSLLTFVSLLRA--SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNC 502

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------ 274
                +R +F++M  K++V  N +  G  +                              
Sbjct: 503 YCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMV 562

Query: 275 -----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      G+E H  L++ GL     + N L++MYAKCG+ +D+   F     +D V
Sbjct: 563 TAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVV 622

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
            WN++IS    +G  ++A+     M  +G+  +  + +  LS+C+  G +  G +     
Sbjct: 623 CWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM 682

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD-QVSWNSVIGAFADS 436
           L+ G++ +      ++SL   AG L++  ++   MP     + W S++   A +
Sbjct: 683 LRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKA 736



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 140/279 (50%), Gaps = 6/279 (2%)

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           F  +L   +S  +    + VH Q+I + +  +T + N L++ Y + G M    K+F +M 
Sbjct: 47  FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNL-VWFMMQRGQRLDHFTFATVLSACASVATLERG 580
           E R+ VSW++M+S   H+ +  +++ + + F   R    + +  ++ + AC+ +    R 
Sbjct: 107 E-RNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRW 165

Query: 581 M--EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
           M  ++ +  V++  + DV +G+ L+D Y K G IDYA   FD +P ++  +W +MISG  
Sbjct: 166 MVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCV 225

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
           + G    +L LF Q+  D  +PD      VLSACS    + EG K   +    YGL    
Sbjct: 226 KMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFL-EGGKQIHAHILRYGLEMDA 284

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
              + ++D   + G +    +  N MP   N + W T+L
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTLL 322



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 9/257 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           +K  H  + K+G   D+F  + LI+VY     L  +  +FDEM  ++ V W  + +GY  
Sbjct: 473 SKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQ 532

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           +  + EA  +F E+  +    + +   +++ A      +  + G + HC +LK     + 
Sbjct: 533 QSENEEALNLFLELQLSRERPDEFTFANMVTAAGNL--ASVQLGQEFHCQLLKRGLECNP 590

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            ++N L+ MY  C    D A + F+   +RD++ WNS+IS Y+  G+     ++  +M  
Sbjct: 591 YITNALLDMYAKCGSPED-AHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMS 649

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           EG    ++PN  TF  +++A   + L    L Q    ++ + G+  +      +VS   R
Sbjct: 650 EG----IEPNYITFVGVLSACSHAGLVEDGLKQ--FELMLRFGIEPETEHYVCMVSLLGR 703

Query: 244 LGNFYYARKIFEQMIQK 260
            G    AR++ E+M  K
Sbjct: 704 AGRLNKARELIEKMPTK 720



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 11/192 (5%)

Query: 555 RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
           RG+R     FA +L   AS   L     VH   +   LE D  + + L+++YS+ G + Y
Sbjct: 42  RGRR----EFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVY 97

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM-KLDGPLPDHVTFVGVLSACS 673
           A + F+ MP RN+ SW++M+S    HG  +++L +F +  +     P+       + ACS
Sbjct: 98  ARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS 157

Query: 674 HAGLVDEG---FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNS 730
             GL   G       +S     G    +   + ++D   + G +D      + +P   ++
Sbjct: 158 --GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKST 214

Query: 731 LIWRTVLGACCR 742
           + W T++  C +
Sbjct: 215 VTWTTMISGCVK 226


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/670 (36%), Positives = 392/670 (58%), Gaps = 15/670 (2%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R  + VH +  R+GL   + V   LV++YAKC +   + +VFR M  +D V+WN M++G 
Sbjct: 146 RSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGY 205

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD- 391
             +G Y + I     M+ D   +++ +L++ L   A  G +  G+ +H   ++     D 
Sbjct: 206 ALHGKYSDTIACLLLMQDDHAPNAS-TLVALLPLLAQHGALSQGRAVHAYSVRACSLHDH 264

Query: 392 ---VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
              V V  ALL +YA  G+L    +VF  M   ++V+W++++G F     ++ EA   + 
Sbjct: 265 KDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRML-EAFSLFK 323

Query: 449 DMRRAGW---SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
           DM   G    SP  V   + L A ++ S   LG Q+HA + K  +  + T  N+LLS Y 
Sbjct: 324 DMLAQGLCFLSPTSVA--SALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYA 381

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           K G +D    +F +M  + D VS+++++SGY+ N    +A  +   M     + D  T  
Sbjct: 382 KAGLIDQATTLFDQMVVK-DTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMV 440

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           +++ AC+ +A L+ G   H   +   +  +  I +AL+DMY+KCGRID + + FD+MP R
Sbjct: 441 SLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPAR 500

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
           ++ SWN+MI+GY  HG G +A  LF  MK     PD VTF+ ++SACSH+GLV EG + F
Sbjct: 501 DIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWF 560

Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANC 745
             M+  YG+ P++E +  MVDLL R G LD+  +FI  MP+  +  +W  +LGA CR + 
Sbjct: 561 HMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGA-CRVH- 618

Query: 746 RKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSW 805
           +  +LG++ ++M+ ++ P+   N+VLL+N++++ G++++ A+ R   KE   KK  GCSW
Sbjct: 619 KNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSW 678

Query: 806 VTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVS 865
           + +   +H F+ GD SH +   IY++L  +   +   GY   T F L D+E E KE  + 
Sbjct: 679 IEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQDVEEEEKEKALL 738

Query: 866 YHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFN 924
           YHSEK+A+AF VLT +    I + KNLRVCGDCH+  K+++ +  R I++RD+NRFHHF 
Sbjct: 739 YHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAIIVRDANRFHHFK 798

Query: 925 DGKCSCGDYW 934
           +G+CSCGD+W
Sbjct: 799 NGQCSCGDFW 808



 Score =  189 bits (479), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 145/552 (26%), Positives = 250/552 (45%), Gaps = 68/552 (12%)

Query: 34  GDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVL 93
           GDL+ A  LFD++P      +  ++  Y+ +G +           R     N Y    VL
Sbjct: 77  GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136

Query: 94  RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
           +AC        +    VHC   ++    D  VS  L+ +Y  C  S   A  +F  +  R
Sbjct: 137 KACSAL--LDLRSARAVHCHAARAGLHADLFVSTALVDVYAKC-ASFRHAATVFRRMPAR 193

Query: 154 DLISWNSIISVYSQRG---DTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSSV 208
           D+++WN++++ Y+  G   DTI+   L   MQ +       PN  T  +L+   A + ++
Sbjct: 194 DVVAWNAMLAGYALHGKYSDTIACLLL---MQDDH-----APNASTLVALLPLLAQHGAL 245

Query: 209 LSGSYLLQQILAMVKKAGLLSD----LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS 264
             G    + + A   +A  L D    + VG+AL+  +A+ G+  YA ++FE M  +N V+
Sbjct: 246 SQG----RAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVT 301

Query: 265 MNGLMEG---------------------------------RRK---------GKEVHGYL 282
            + L+ G                                  R          GK++H  L
Sbjct: 302 WSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALL 361

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
            +SGL   +  GN L++MYAK G ID + ++F  M+ KD+VS++ ++SG  QNG  +EA 
Sbjct: 362 AKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAF 421

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
             F  M+   +     +++S + +C+ L  +  G+  HG  +  G+ S+ S+ NAL+ +Y
Sbjct: 422 RVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMY 481

Query: 403 ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
           A  G +    ++F +MP  D VSWN++I  +     L  EA   +LDM+     P+ VTF
Sbjct: 482 AKCGRIDLSRQIFDVMPARDIVSWNTMIAGYG-IHGLGKEATALFLDMKHQACEPDDVTF 540

Query: 463 INILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           I +++A S   +   G +  H    KY +         ++    + G +D+  +    M 
Sbjct: 541 ICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMP 600

Query: 522 ERRDEVSWNSMI 533
            + D   W +++
Sbjct: 601 LKADVRVWGALL 612



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 226/466 (48%), Gaps = 15/466 (3%)

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           CG +  +R +F  +       +N +I      G      +     RR     +N++    
Sbjct: 76  CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L +C++L  +   + +H    + GL +D+ VS AL+ +YA          VF  MP  D 
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           V+WN+++  +A      S+ +   L M+    +PN  T + +L   +       G  VHA
Sbjct: 196 VAWNAMLAGYA-LHGKYSDTIACLLLMQD-DHAPNASTLVALLPLLAQHGALSQGRAVHA 253

Query: 484 QVIK----YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
             ++    ++  +   +  ALL  Y KCG +    ++F  M+  R+EV+W++++ G++  
Sbjct: 254 YSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAV-RNEVTWSALVGGFVLC 312

Query: 540 ELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
             + +A +L   M+ +G   L   + A+ L ACA+++ L  G ++HA   ++ L  D+  
Sbjct: 313 GRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTA 372

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
           G++L+ MY+K G ID A+  FD M V++  S+++++SGY ++G  D+A  +F +M+    
Sbjct: 373 GNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNV 432

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
            PD  T V ++ ACSH   +  G K       V G+  +    + ++D+  + G +D   
Sbjct: 433 QPDVATMVSLIPACSHLAALQHG-KCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSR 491

Query: 719 EFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ 764
           +  + MP   + + W T++     A      LG++A  +  +M+ Q
Sbjct: 492 QIFDVMPAR-DIVSWNTMI-----AGYGIHGLGKEATALFLDMKHQ 531



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 228/521 (43%), Gaps = 61/521 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           + A+  H    + G   D+F+   L++VY +      A+ +F  MP R+ V+W  +++GY
Sbjct: 146 RSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGY 205

Query: 62  THKGMSNE--ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
              G  ++  AC +  +   A    N   L ++L    + G      G  VH   +++  
Sbjct: 206 ALHGKYSDTIACLLLMQDDHAP---NASTLVALLPLLAQHG--ALSQGRAVHAYSVRACS 260

Query: 120 TFDG----LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVF 175
             D     LV   L+ MY  C      A R+FE +  R+ ++W++++  +   G  +  F
Sbjct: 261 LHDHKDGVLVGTALLDMYAKCGHLV-YASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAF 319

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS 235
            LF  M  +G  + L P          A  S +  G    +Q+ A++ K+GL +DL  G+
Sbjct: 320 SLFKDMLAQGLCF-LSPTSVASALRACANLSDLCLG----KQLHALLAKSGLHTDLTAGN 374

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------------------- 272
           +L+S +A+ G    A  +F+QM+ K+ VS + L+ G                        
Sbjct: 375 SLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQP 434

Query: 273 ------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                             + GK  HG +I  G+    ++ N L++MYAKCG ID SR +F
Sbjct: 435 DVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIF 494

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             M  +D VSWNTMI+G   +G  +EA   F  M+       + + I  +S+C+  G + 
Sbjct: 495 DVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVT 554

Query: 375 LGQQ-IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            G++  H    K G+   +     ++ L A  G+L    +    MP + D   W +++GA
Sbjct: 555 EGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGA 614

Query: 433 FADSEAL-VSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
               + + + + V   +       + N V   NI +AA  F
Sbjct: 615 CRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRF 655



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 151/319 (47%), Gaps = 22/319 (6%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  + K G   D+   N+L+++Y + G +  A+ LFD+M  +++VS++ +VSGY   
Sbjct: 355 KQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQN 414

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G ++EA ++F++M       +   + S++ AC     +  + G   H  V+      +  
Sbjct: 415 GKADEAFRVFRKMQACNVQPDVATMVSLIPACSHL--AALQHGKCGHGSVIVRGIASETS 472

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           + N LI MY  C    D +R+IF+ +  RD++SWN++I+ Y   G       LF  M+ +
Sbjct: 473 ICNALIDMYAKC-GRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQ 531

Query: 185 GFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDL--YVGSALVSG 240
               + +P++ TF  LI+A   S  V  G         M  K G+   +  Y+G  +V  
Sbjct: 532 ----ACEPDDVTFICLISACSHSGLVTEGKRWFHM---MAHKYGITPRMEHYIG--MVDL 582

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGR-RKGKEVH-GYLIRSGLFDMVAVGNG-- 296
            AR G    A +  + M  K  V + G + G  R  K +  G  + S +  +   G G  
Sbjct: 583 LARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNF 642

Query: 297 --LVNMYAKCGTIDDSRSV 313
             L N+++  G  D++  V
Sbjct: 643 VLLSNIFSAAGRFDEAAEV 661


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 272/787 (34%), Positives = 425/787 (54%), Gaps = 23/787 (2%)

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
           T  L+  NSI++  S+    I V  L  R    GF  SL   E         A S   S 
Sbjct: 4   TLPLVQSNSIVASKSREAAEILVTVLTIRKSIFGFSLSLLGLEEKLQVQKENARSKPNSN 63

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
               + +  M ++      L+  ++  SG  +   F     +      K++++    ++ 
Sbjct: 64  ---FEGLGPMSREVAFWLQLF--TSYQSGVPKFHQFSSVPDL------KHLLNNAAKLKS 112

Query: 272 RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS--VSWNTMI 329
            +   ++H  L+ +     +A  N L+ +YAKCG+I  +  +F       +  V+W T+I
Sbjct: 113 LKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLI 172

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
           + L ++    +A+  F  MR  G+  ++F+  + L +CA    +  GQQIH    K    
Sbjct: 173 NQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFL 232

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           +D  V+ ALL +YA  G +     VF  MP  + VSWNS+I  F  ++ L   A+  + +
Sbjct: 233 NDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNK-LYGRAIGVFRE 291

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           +   G  P+ V+  ++L+A +       G QVH  ++K  +     ++N+L+  Y KCG 
Sbjct: 292 VLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGL 349

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
            +D  K+F    +R D V+WN MI G        +A      M++ G   D  +++++  
Sbjct: 350 FEDATKLFCGGGDR-DVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFH 408

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           A AS+A L +G  +H+  ++     +  I S+LV MY KCG +  A + F      NV  
Sbjct: 409 ASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVC 468

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           W +MI+ + +HG  ++A+ LF +M  +G +P+++TFV VLSACSH G +D+GFK+F SM+
Sbjct: 469 WTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMA 528

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR-ANCRKT 748
            V+ + P LE ++CMVDLLGR G L++   FI  MP  P+SL+W  +LGAC + AN    
Sbjct: 529 NVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHAN---V 585

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
           E+GR+ A  LF++EP N  NY+LL+N+Y   G  E+  + R+ M    V+KE+GCSW+ +
Sbjct: 586 EMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDV 645

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
           K+   VF A D SH     IY  L++L + ++  GYV +T+FA   +E  S+E  +  HS
Sbjct: 646 KNRTFVFNANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSVEG-SEEQSLWCHS 704

Query: 869 EKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGK 927
           EK+A+AF +L      P+RI KNLR CGDCH+  KF S+I  REI++RD NRFH F +G 
Sbjct: 705 EKLALAFGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRFTNGS 764

Query: 928 CSCGDYW 934
           CSC DYW
Sbjct: 765 CSCMDYW 771



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 204/481 (42%), Gaps = 66/481 (13%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD--EMPDRNSVSWACIVS 59
           K A   H Q++       +   NTL+ +Y + G +     LF+    P  N V+W  +++
Sbjct: 114 KHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLIN 173

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
             +      +A   F  M   G   N +   ++L AC     +    G Q+H L+ K   
Sbjct: 174 QLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHA--ALLSEGQQIHALIHKHCF 231

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR---GDTISVFK 176
             D  V+  L+ MY  C  S   A  +F+E+  R+L+SWNS+I  + +    G  I VF 
Sbjct: 232 LNDPFVATALLDMYAKC-GSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVF- 289

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAA-------YSSVLSGS----------YLLQQIL 219
                 RE    SL P++ +  S+++A        +   + GS          Y+   ++
Sbjct: 290 ------REVL--SLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLV 341

Query: 220 AMVKKAGLLSD---LYVG---------SALVSGFARLGNFYYARKIFEQMIQKNV----V 263
            M  K GL  D   L+ G         + ++ G  R  NF  A   F+ MI++ V     
Sbjct: 342 DMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEA 401

Query: 264 SMNGLMEGR------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
           S + L           +G  +H +++++G      + + LV MY KCG++ D+  VFR  
Sbjct: 402 SYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRET 461

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI---- 373
              + V W  MI+   Q+GC  EAI  F  M  +G++    + +S LS+C+  G I    
Sbjct: 462 KEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGF 521

Query: 374 -MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIG 431
                  +   +K GL+        ++ L    G L    +    MP E D + W +++G
Sbjct: 522 KYFNSMANVHNIKPGLEHYA----CMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLG 577

Query: 432 A 432
           A
Sbjct: 578 A 578


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 241/664 (36%), Positives = 379/664 (57%), Gaps = 6/664 (0%)

Query: 272 RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
           +R   ++H  L+ SGL +   +    VN     G I  +R VF          WN +I G
Sbjct: 84  KRHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRG 143

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
              +  + +AI  +  M+  G+    F+L   L +C+ +  + +G+++HG+  +LG +SD
Sbjct: 144 YSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESD 203

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           V V N L++LYA  G + +   VF  + + + VSW S+I  +  +  L  EA++ +  MR
Sbjct: 204 VFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQN-GLPMEALRIFGQMR 262

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
           +    P+ +  +++L A +     + G  +H  V+K  +  E  +  +L + Y KCG++ 
Sbjct: 263 QRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVM 322

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
                F +M E  + + WN+MISGY  N    +A+ L   M+ +  R D  T  + + AC
Sbjct: 323 VARSFFDQM-EIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILAC 381

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           A V +L+    +     +     DV + +AL+DM++KCG +D A   FD    ++V  W+
Sbjct: 382 AQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWS 441

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           +MI GY  HG G  A+ LF  MK  G  P+ VTFVG+L+AC+H+GLV+EG++ F SM + 
Sbjct: 442 AMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM-KY 500

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
           YG+  + + ++C+VDLLGR+G L++  +FI  MPI P   +W  +LGAC     R   LG
Sbjct: 501 YGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGAC--KIYRHVTLG 558

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
             AA  LF ++P N  +YV L+N+YAS   W+ VAK R  M+E  + K+ G S + +   
Sbjct: 559 EYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGK 618

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
           +  F  GD+SHP    I+E+L+ L +++++AG++P  +  L DL  E KE+ +  HSE++
Sbjct: 619 LQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERL 678

Query: 872 AVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           A+A+ L   +    +RI KNLR C +CHSA K ISK+V REIV+RD+NRFHHF +G CSC
Sbjct: 679 AIAYGLISTAPGTTLRITKNLRACINCHSATKLISKLVNREIVVRDANRFHHFKNGVCSC 738

Query: 931 GDYW 934
            DYW
Sbjct: 739 RDYW 742



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 223/466 (47%), Gaps = 49/466 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q++  G     FL    +N    +G++  A K+FDE P+ +   W  I+ GY+     
Sbjct: 91  HAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFF 150

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            +A +M+  M  +G   + + L  VL+AC   G    + G +VH  + +     D  V N
Sbjct: 151 GDAIEMYSRMQASGVNPDGFTLPCVLKACS--GVPVLEVGKRVHGQIFRLGFESDVFVQN 208

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+A+Y  C    + AR +FE ++ R+++SW S+IS Y Q G  +   ++F +M++    
Sbjct: 209 GLVALYAKC-GRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQR--- 264

Query: 188 YSLKPNEYTFGSLITAAYSSV--------LSGSY----------LLQQILAMVKKAGL-- 227
            ++KP+     S++  AY+ V        + G            LL  + AM  K G   
Sbjct: 265 -NVKPDWIALVSVLR-AYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVM 322

Query: 228 ----------LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS-----MNGLMEGR 272
                     + ++ + +A++SG+A+ G    A  +F++MI KN+ +      + ++   
Sbjct: 323 VARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACA 382

Query: 273 RKG-----KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
           + G     K +  Y+ ++   + V V   L++M+AKCG++D +R VF   + KD V W+ 
Sbjct: 383 QVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSA 442

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           MI G   +G  ++AI  F AM++ G+  ++ + +  L++C   G +  G ++       G
Sbjct: 443 MIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYG 502

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
           +++       ++ L   +G+L+        MP    VS W +++GA
Sbjct: 503 IEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGA 548



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 138/269 (51%), Gaps = 11/269 (4%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H QI + GF  DVF+ N L+ +Y + G +  A  +F+ + DRN VSW  ++SGY  
Sbjct: 188 GKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQ 247

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+  EA ++F +M +     +  AL SVLRA  +      + G  +H  V+K    F+ 
Sbjct: 248 NGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDV--EDLEQGKSIHGCVVKMGLEFEP 305

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            +   L AMY  C +    AR  F+++E  +++ WN++IS Y++ G T     LF  M  
Sbjct: 306 DLLISLTAMYAKCGQVM-VARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMIS 364

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILA-MVKKAGLLSDLYVGSALVSGFA 242
           +  R     +  T  S I A       GS  L + +   + K    +D++V +AL+  FA
Sbjct: 365 KNIR----TDSITVRSAILACAQ---VGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFA 417

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           + G+   AR++F++ + K+VV  + ++ G
Sbjct: 418 KCGSVDLAREVFDRTLDKDVVVWSAMIVG 446



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 7/208 (3%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K G  ++  L  +L  +Y + G +  A   FD+M   N + W  ++SGY
Sbjct: 287 EQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGY 346

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G +NEA  +F+EM+      +   + S + AC + G       M  +  + K+    
Sbjct: 347 AKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDY--INKTEYRN 404

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V+  LI M+  C  S D AR +F+    +D++ W+++I  Y   G       LF  M
Sbjct: 405 DVFVNTALIDMFAKC-GSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAM 463

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVL 209
           ++ G    + PN+ TF  L+TA   S L
Sbjct: 464 KQAG----VCPNDVTFVGLLTACNHSGL 487


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/630 (39%), Positives = 370/630 (58%), Gaps = 14/630 (2%)

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
           R++   D  SWN++I+ L ++G   EA+  F +MR+  L  +  S    + +C+SL  I 
Sbjct: 34  RYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIF 93

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
            G+Q H +    G  SD+ VS+AL+ +Y+  G L    KVF  +P+ + VSW S+I  + 
Sbjct: 94  SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGY- 152

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTF------INILAAASSFSMGKLGHQVHAQVIKY 488
           D      +AV  + D+       +   F      +++++A S  +   L   +H+ VIK 
Sbjct: 153 DLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKR 212

Query: 489 NVANETTIENALLSCYGKCGE--MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAM 546
                 ++ N LL  Y K GE  +    KIF ++ ++ D VS+NS++S Y  + +  +A 
Sbjct: 213 GFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK-DRVSYNSIMSVYAQSGMSNEAF 271

Query: 547 NLVWFMM-QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
           ++   ++ ++    +  T +TVL A +    L  G  +H   +R  LE DV++G++++DM
Sbjct: 272 DVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
           Y KCGR++ A   FD M  +NV SW +MI+GY  HGH  KAL LF  M   G  P+++TF
Sbjct: 332 YCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITF 391

Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
           V VL+ACSHAGL D G+  F +M   +G+ P LE + CMVDLLGRAG L K  + I KM 
Sbjct: 392 VSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMK 451

Query: 726 ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDV 785
           + P+S+IW ++L A CR + +  EL   +   LFE++P N   Y+LL+++YA  G+W+DV
Sbjct: 452 MEPDSIIWSSLLAA-CRIH-KNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDV 509

Query: 786 AKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
            + R  MK   + K  G S + +   VHVF+ GDE HP+++ IYE L ELN+K+ +AGYV
Sbjct: 510 ERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYV 569

Query: 846 PQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFI 904
             T     D++ E KE  +  HSEK+A+AF ++       + ++KNLRVC DCH+  K I
Sbjct: 570 SNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLI 629

Query: 905 SKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           SKIV RE V+RD+ RFHHF DG CSCGDYW
Sbjct: 630 SKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 216/476 (45%), Gaps = 80/476 (16%)

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQ--------------KNVVSMNGLMEGRRK 274
           +D++  +++++  AR G+   A + F  M +              K   S+  +  G++ 
Sbjct: 39  TDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQT 98

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            ++   +  +S +F    V + L+ MY+ CG ++D+R VF  +  ++ VSW +MI G D 
Sbjct: 99  HQQAFVFGYQSDIF----VSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154

Query: 335 NGCYEEAIMNFCAMRRDGLMSSN----------FSLISTLSSCASLGWIMLGQQIHGEGL 384
           NG   +A+  F    +D L+  N            ++S +S+C+ +    L + IH   +
Sbjct: 155 NGNALDAVSLF----KDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVI 210

Query: 385 KLGLDSDVSVSNALLSLYADAGY--LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
           K G D  VSV N LL  YA  G   ++   K+F  + + D+VS+NS++  +A S  + +E
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS-GMSNE 269

Query: 443 AVKYYLDM-RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           A   +  + +    + N +T   +L A S     ++G  +H QVI+  + ++  +  +++
Sbjct: 270 AFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
             Y KCG ++     F RM + ++  SW +MI+GY  +    KA+ L   M+  G R ++
Sbjct: 330 DMYCKCGRVETARLAFDRM-KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNY 388

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
            TF +VL+AC                                   S  G  D    +F+ 
Sbjct: 389 ITFVSVLAAC-----------------------------------SHAGLHDVGWHWFNA 413

Query: 622 MPVR-----NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
           M  R      +  +  M+    R G   KA  L  +MK++   PD + +  +L+AC
Sbjct: 414 MKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKME---PDSIIWSSLLAAC 466



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 189/440 (42%), Gaps = 50/440 (11%)

Query: 40  SKLFDEMPDRNSV-SWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQE 98
           + LF+   D+  V SW  +++     G S EA + F  M +      R +    ++AC  
Sbjct: 29  TTLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSS 88

Query: 99  CGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISW 158
                   G Q H          D  VS+ LI MY +C +  D AR++F+EI  R+++SW
Sbjct: 89  L--LDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLED-ARKVFDEIPKRNIVSW 145

Query: 159 NSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQI 218
            S+I  Y   G+ +    LF  +  E           + G +   +  S ++   L + I
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESI 205

Query: 219 LAMVKKAGLLSDLYVGSALVSGFAR--LGNFYYARKIFEQMIQKNVVSMNGLME------ 270
            + V K G    + VG+ L+  +A+   G    ARKIF+Q++ K+ VS N +M       
Sbjct: 206 HSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG 265

Query: 271 ------------------------------------GRRKGKEVHGYLIRSGLFDMVAVG 294
                                                 R GK +H  +IR GL D V VG
Sbjct: 266 MSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVG 325

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
             +++MY KCG ++ +R  F  M  K+  SW  MI+G   +G   +A+  F AM   G+ 
Sbjct: 326 TSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVR 385

Query: 355 SSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
            +  + +S L++C+  G   +G    +    + G++  +     ++ L   AG+L +   
Sbjct: 386 PNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYD 445

Query: 414 VFFLMP-EHDQVSWNSVIGA 432
           +   M  E D + W+S++ A
Sbjct: 446 LIQKMKMEPDSIIWSSLLAA 465



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 141/278 (50%), Gaps = 22/278 (7%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q    G+  D+F+ + LI +Y   G L  A K+FDE+P RN VSW  ++ GY   
Sbjct: 96  KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155

Query: 65  GMSNEACKMFKEMV------RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
           G + +A  +FK+++       A   L+   + SV+ AC      G      +H  V+K  
Sbjct: 156 GNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLT--ESIHSFVIK-- 211

Query: 119 QTFDGLVS--NVLIAMYGSCLE-STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVF 175
           + FD  VS  N L+  Y    E     AR+IF++I  +D +S+NSI+SVY+Q G +   F
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271

Query: 176 KLFSRMQREGFRYSLKPNEYTFGS-LITAAYSSVLS-GSYLLQQILAMVKKAGLLSDLYV 233
            +F R+ +E     +  N  T  + L+  ++S  L  G  +  Q++ M    GL  D+ V
Sbjct: 272 DVFRRLIKEKV---VTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRM----GLEDDVIV 324

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           G++++  + + G    AR  F++M  KNV S   ++ G
Sbjct: 325 GTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAG 362



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 153/382 (40%), Gaps = 61/382 (15%)

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
           E  +   +F R  ++ D  SWNS+I+    +    +A+     M +        +F   +
Sbjct: 24  ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAI 83

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
            AC+S+  +  G + H        + D+ + SAL+ MYS CG+++ A + FD +P RN+ 
Sbjct: 84  KACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF------VGVLSACS--------- 673
           SW SMI GY  +G+   A++LF  + ++    D   F      V V+SACS         
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTE 203

Query: 674 --HAGLVDEGFKHFKSMSQVY----------GLIPQLEQFSCMVD-----------LLGR 710
             H+ ++  GF    S+              G+    + F  +VD           +  +
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263

Query: 711 AG----ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           +G      D     I +  +T N +   TVL A   +   +  +G+   + +  M  ++ 
Sbjct: 264 SGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALR--IGKCIHDQVIRMGLEDD 321

Query: 767 VNY-VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
           V     + +MY   G+ E    A   MK   V+     SW  M  G      G   H  K
Sbjct: 322 VIVGTSIIDMYCKCGRVETARLAFDRMKNKNVR-----SWTAMIAGY-----GMHGHAAK 371

Query: 826 DLIYEKLKELNQKMRDAGYVPQ 847
            L      EL   M D+G  P 
Sbjct: 372 AL------ELFPAMIDSGVRPN 387



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 52/96 (54%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q+++ G   DV +  ++I++Y + G + +A   FD M ++N  SW  +++GY   
Sbjct: 307 KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMH 366

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G + +A ++F  M+ +G   N     SVL AC   G
Sbjct: 367 GHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAG 402


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/630 (39%), Positives = 370/630 (58%), Gaps = 14/630 (2%)

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
           R++   D  SWN++I+ L ++G   EA++ F +MR+  L  +  S    + +C+SL  I 
Sbjct: 34  RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
            G+Q H +    G  SD+ VS+AL+ +Y+  G L    KVF  +P+ D VSW S+I  + 
Sbjct: 94  SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGY- 152

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTF------INILAAASSFSMGKLGHQVHAQVIKY 488
           D      +AV  + D+       +   F      +++++A S      L   +H+ VIK 
Sbjct: 153 DLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKR 212

Query: 489 NVANETTIENALLSCYGKCGE--MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAM 546
                 ++ N LL  Y K GE  +    KIF ++ ++ D VS+NS++S Y  + +  +A 
Sbjct: 213 GFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK-DRVSYNSIMSVYAQSGMSNEAF 271

Query: 547 NLVWFMMQ-RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
            +   +++ +    +  T +TVL A +    L  G  +H   +R  LE DV++G++++DM
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
           Y KCGR++ A + FD M  +NV SW +MI+GY  HGH  KAL LF  M   G  P+++TF
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITF 391

Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
           V VL+ACSHAGL  EG++ F +M   +G+ P LE + CMVDLLGRAG L K  + I +M 
Sbjct: 392 VSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK 451

Query: 726 ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDV 785
           + P+S+IW ++L A CR + +  EL   +   LFE++  N   Y+LL+++YA  G+W+DV
Sbjct: 452 MKPDSIIWSSLLAA-CRIH-KNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDV 509

Query: 786 AKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
            + R  MK   + K  G S + +   VHVF+ GDE HP+++ IYE L ELN+K+ +AGYV
Sbjct: 510 ERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYV 569

Query: 846 PQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFI 904
             T     D++ E KE  +  HSEK+A+AF ++       + ++KNLRVC DCH+  K I
Sbjct: 570 SNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLI 629

Query: 905 SKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           SKIV RE V+RD+ RFHHF DG CSCGDYW
Sbjct: 630 SKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 194/407 (47%), Gaps = 44/407 (10%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK+ H      G    + V + L+ MY+ CG ++D+R VF  +  +D VSW +MI G D 
Sbjct: 95  GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDL 154

Query: 335 NGCYEEAIMNFCAM------RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           NG   +A+  F  +        D +   +  L+S +S+C+ +    L + IH   +K G 
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214

Query: 389 DSDVSVSNALLSLYADAGY--LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
           D  VSV N LL  YA  G   ++   K+F  + + D+VS+NS++  +A S  + +EA + 
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS-GMSNEAFEV 273

Query: 447 YLDM-RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
           +  + +    + N +T   +L A S     ++G  +H QVI+  + ++  +  +++  Y 
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           KCG ++   K F RM + ++  SW +MI+GY  +    KA+ L   M+  G R ++ TF 
Sbjct: 334 KCGRVETARKAFDRM-KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFV 392

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           +VL+AC+          +H  G R    F+ + G                   F + P  
Sbjct: 393 SVLAACSHAG-------LHVEGWRW---FNAMKGR------------------FGVEP-- 422

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
            +  +  M+    R G   KA  L  +MK+    PD + +  +L+AC
Sbjct: 423 GLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK---PDSIIWSSLLAAC 466



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 193/444 (43%), Gaps = 58/444 (13%)

Query: 40  SKLFDEMPDRNSV-SWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQE 98
           + LF+   D+  V SW  +++     G S EA   F  M +      R +    ++AC  
Sbjct: 29  TTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACS- 87

Query: 99  CGPSGFKF--GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLI 156
              S F    G Q H          D  VS+ LI MY +C +  D AR++F+EI  RD++
Sbjct: 88  ---SLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLED-ARKVFDEIPKRDIV 143

Query: 157 SWNSIISVYSQRGDTISVFKLFSRM--QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL 214
           SW S+I  Y   G+ +    LF  +         ++  +     S+I+A   S +    L
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISAC--SRVPAKGL 201

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFAR--LGNFYYARKIFEQMIQKNVVSMNGLME-- 270
            + I + V K G    + VG+ L+  +A+   G    ARKIF+Q++ K+ VS N +M   
Sbjct: 202 TESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVY 261

Query: 271 ----------------------------------------GRRKGKEVHGYLIRSGLFDM 290
                                                     R GK +H  +IR GL D 
Sbjct: 262 AQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDD 321

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           V VG  +++MY KCG ++ +R  F  M  K+  SW  MI+G   +G   +A+  F AM  
Sbjct: 322 VIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID 381

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
            G+  +  + +S L++C+  G  + G +  +    + G++  +     ++ L   AG+L 
Sbjct: 382 SGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ 441

Query: 410 RCLKVFFLMP-EHDQVSWNSVIGA 432
           +   +   M  + D + W+S++ A
Sbjct: 442 KAYDLIQRMKMKPDSIIWSSLLAA 465



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 141/278 (50%), Gaps = 22/278 (7%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q    G+  D+F+ + LI +Y   G L  A K+FDE+P R+ VSW  ++ GY   
Sbjct: 96  KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLN 155

Query: 65  GMSNEACKMFKEMV------RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
           G + +A  +FK+++           L+   L SV+ AC      G      +H  V+K  
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT--ESIHSFVIK-- 211

Query: 119 QTFDGLVS--NVLIAMYGSCLE-STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVF 175
           + FD  VS  N L+  Y    E     AR+IF++I  +D +S+NSI+SVY+Q G +   F
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271

Query: 176 KLFSRMQREGFRYSLKPNEYTFGS-LITAAYSSVLS-GSYLLQQILAMVKKAGLLSDLYV 233
           ++F R+ +      +  N  T  + L+  ++S  L  G  +  Q++ M    GL  D+ V
Sbjct: 272 EVFRRLVKNKV---VTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM----GLEDDVIV 324

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           G++++  + + G    ARK F++M  KNV S   ++ G
Sbjct: 325 GTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAG 362



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 157/382 (41%), Gaps = 61/382 (15%)

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
           E  +   +F R  ++ D  SWNS+I+    +    +A+     M +        +F   +
Sbjct: 24  ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAI 83

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
            AC+S+  +  G + H        + D+ + SAL+ MYS CG+++ A + FD +P R++ 
Sbjct: 84  KACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIV 143

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF------VGVLSACS--------- 673
           SW SMI GY  +G+   A++LF  + +D    D   F      V V+SACS         
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203

Query: 674 --HAGLVDEGFKHFKSMSQVY----------GLIPQLEQFSCMVD-----------LLGR 710
             H+ ++  GF    S+              G+    + F  +VD           +  +
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263

Query: 711 AGELDKIEEFINKM----PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           +G  ++  E   ++     +T N++   TVL A   +   +  +G+   + +  M  ++ 
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALR--IGKCIHDQVIRMGLEDD 321

Query: 767 VNY-VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
           V     + +MY   G+ E   KA   MK   V+     SW  M  G      G   H  K
Sbjct: 322 VIVGTSIIDMYCKCGRVETARKAFDRMKNKNVR-----SWTAMIAGY-----GMHGHAAK 371

Query: 826 DLIYEKLKELNQKMRDAGYVPQ 847
            L      EL   M D+G  P 
Sbjct: 372 AL------ELFPAMIDSGVRPN 387



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 53/96 (55%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q+++ G   DV +  ++I++Y + G + +A K FD M ++N  SW  +++GY   
Sbjct: 307 KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMH 366

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G + +A ++F  M+ +G   N     SVL AC   G
Sbjct: 367 GHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAG 402


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/668 (35%), Positives = 378/668 (56%), Gaps = 44/668 (6%)

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
           +Y+    + DS  +F  +    +++W ++I     +G   +++ +F  M   GL   +  
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR--------- 410
             S L SCA L  + LG+ +HG  +++GLD D+   NAL+++Y+   +L           
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 411 -----------------------CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
                                    K+F +MPE D VSWN++I   A +  L  E ++  
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARN-GLYEETLRMI 227

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
            +M  A   P+  T  ++L   +       G ++H   I+  +  +  + ++L+  Y KC
Sbjct: 228 REMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKC 287

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
             + D  ++F  ++ER D +SWNS+I+G + N L  + +     M+    +   ++F+++
Sbjct: 288 TRVADSCRVFTLLTER-DGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSI 346

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           + ACA + TL  G ++H    R   + ++ I S+LVDMY+KCG I  A + FD M +R++
Sbjct: 347 MPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDM 406

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            SW +MI G A HG    A+ LF QM+ +G          VL+ACSH GLVDE +K+F S
Sbjct: 407 VSWTAMIMGCALHGQAPDAIELFEQMETEG-------IKAVLTACSHGGLVDEAWKYFNS 459

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           M++ +G+ P +E ++ + DLLGRAG L++  +FI  M I P   IW T+L AC R + + 
Sbjct: 460 MTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSAC-RVH-KN 517

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
            ++  K AN + E++P N   Y+LLAN+Y++  +W++ AK R +M+   ++K   CSW+ 
Sbjct: 518 IDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIE 577

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
           +K+ V+ F+AGDESHP  + I E ++ L + M   GYVP T     D+E E K+ LV  H
Sbjct: 578 VKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSH 637

Query: 868 SEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SE++A+ F ++   + + IR+ KNLRVC DCH+A KFISKIVGREIV+RD++RFHHF +G
Sbjct: 638 SERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNG 697

Query: 927 KCSCGDYW 934
            CSCGDYW
Sbjct: 698 TCSCGDYW 705



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 184/397 (46%), Gaps = 37/397 (9%)

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
            QQ+H + LK    S +   + LLS+Y+    L   L++F  +     ++W SVI  +  
Sbjct: 25  AQQLHAQVLKFQASS-LCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYT- 82

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           S  L  +++  ++ M  +G  P+   F ++L + +      LG  +H  +I+  +  +  
Sbjct: 83  SHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLY 142

Query: 496 IENALLSCYGK-------------CGEM-------------------DDCEKIFARMSER 523
             NAL++ Y K              GE+                   D   KIF  M E 
Sbjct: 143 TGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPE- 201

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
           +D VSWN++I+G   N L  + + ++  M     + D FT ++VL   A    + RG E+
Sbjct: 202 KDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEI 261

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           H C +R  L+ D+ + S+L+DMY+KC R+  + R F L+  R+  SWNS+I+G  ++G  
Sbjct: 262 HGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLF 321

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC 703
           D+ L  F QM +    P   +F  ++ AC+H   +  G K         G    +   S 
Sbjct: 322 DEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLG-KQLHGYITRNGFDENIFIASS 380

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC 740
           +VD+  + G +   ++  ++M +  + + W  ++  C
Sbjct: 381 LVDMYAKCGNIRTAKQIFDRMRLR-DMVSWTAMIMGC 416



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 157/359 (43%), Gaps = 79/359 (22%)

Query: 145 RIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA 204
           R+F  I     ++W S+I  Y+  G        F  M   G    L P+   F S++ + 
Sbjct: 61  RLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASG----LYPDHNVFPSVLKSC 116

Query: 205 YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV-----------SGFARLG-------- 245
             ++L    L + +   + + GL  DLY G+AL+           SG  RLG        
Sbjct: 117 --ALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEM 174

Query: 246 -------------NFYYARKIFEQMIQKNVVSMNGLMEGR-------------------- 272
                        +    RKIFE M +K++VS N ++ G                     
Sbjct: 175 TERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGAN 234

Query: 273 ---------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
                                 +GKE+HG  IR GL   + V + L++MYAKC  + DS 
Sbjct: 235 LKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSC 294

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
            VF  +  +D +SWN++I+G  QNG ++E +  F  M    +   ++S  S + +CA L 
Sbjct: 295 RVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLT 354

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
            + LG+Q+HG   + G D ++ ++++L+ +YA  G +    ++F  M   D VSW ++I
Sbjct: 355 TLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMI 413



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 206/473 (43%), Gaps = 95/473 (20%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H Q+LK   A  +   + L+++Y  +  L  + +LF+ +    +++W  ++  YT 
Sbjct: 25  AQQLHAQVLKFQ-ASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTS 83

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+ +++   F  M+ +G   +     SVL++C          G  +H  +++    FD 
Sbjct: 84  HGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALL--MDLNLGESLHGYIIRVGLDFDL 141

Query: 124 LVSNVLIAMYGSC--LE-----------------------------STDCARRIFEEIET 152
              N L+ MY     LE                             S D  R+IFE +  
Sbjct: 142 YTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPE 201

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV-LSG 211
           +DL+SWN+II+  ++ G    +++   RM RE    +LKP+ +T  S++     +V +S 
Sbjct: 202 KDLVSWNTIIAGNARNG----LYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISR 257

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM-- 269
               ++I     + GL +D+YV S+L+  +A+      + ++F  + +++ +S N ++  
Sbjct: 258 G---KEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAG 314

Query: 270 --------EGRR-------------------------------KGKEVHGYLIRSGLFDM 290
                   EG R                                GK++HGY+ R+G  + 
Sbjct: 315 CVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDEN 374

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           + + + LV+MYAKCG I  ++ +F  M  +D VSW  MI G   +G   +AI  F  M  
Sbjct: 375 IFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMET 434

Query: 351 DGLMSSNFSLISTLSSCASLG-----WIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           +G+        + L++C+  G     W          G+  G++   +VS+ L
Sbjct: 435 EGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLL 480


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  447 bits (1151), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/673 (35%), Positives = 386/673 (57%), Gaps = 17/673 (2%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            + VHG++ ++G    + V   LVN Y +CG   D+R +F  M  ++ V+W  +++G   
Sbjct: 97  ARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTL 156

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N      +  F  M   G   S+++L +TL++C +   + LG+Q+HG  +K G +S  S+
Sbjct: 157 NSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSM 216

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            N+L SLYA  G L   L+ F+ +PE + ++W ++I A A+ E  V   +  ++DM   G
Sbjct: 217 GNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDG 276

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             PN  T  ++++   +     LG QV A   K        ++N+ +  Y + GE D+  
Sbjct: 277 VMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAM 336

Query: 515 KIFARMSERRDEVSWNSMISGYIH------NELLPK-----AMNLVWFMMQRGQRLDHFT 563
           ++F +M E    ++WN+MISGY        ++L  +     A+ +   + +   + D FT
Sbjct: 337 RLFEQM-EDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFT 395

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           F+++LS C+++  LE+G ++HA  +++    DVV+ SALV+MY+KCG I  A++ F  MP
Sbjct: 396 FSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMP 455

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            R   +W SMISGY++HG   +A+ LF +M+L G  P+ +TFV +LSACS+AGLV+E   
Sbjct: 456 TRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEH 515

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
           +F  M + Y + P ++ + CM+D+  R G ++    FI +    PN  IW +++ A CR+
Sbjct: 516 YFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLV-AGCRS 574

Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
           +    EL   AA+ L E++P+    Y+LL NMY S  +W+DVA+ RK MK+ +V      
Sbjct: 575 H-GNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDR 633

Query: 804 SWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDL 863
           SW+T+KD V+ F A D +HP+   +Y+ L+ L +K +  GY P     L D E + K   
Sbjct: 634 SWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAA 693

Query: 864 --VSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRF 920
             + +HSE++AVA  L +      +R+ KN+ +C DCHS+ K  S +  REI++RDS R 
Sbjct: 694 GSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRL 753

Query: 921 HHFNDGKCSCGDY 933
           H F DG+CSCGD+
Sbjct: 754 HKFKDGRCSCGDF 766



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 195/427 (45%), Gaps = 70/427 (16%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H  + K G   D+F+  +L+N Y+R G    A +LFD MP+RN V+W  +V+GYT 
Sbjct: 97  ARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTL 156

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                   ++F EM+  G   + Y LG+ L AC          G QVH   +K       
Sbjct: 157 NSQPALGLEVFVEMLEMGRYPSHYTLGATLNAC--LASCDVDLGKQVHGYAIKYGAESIT 214

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISV-FKLFSRMQ 182
            + N L ++Y   L S D A R F  I  +++I+W ++IS  ++  + + +   LF  M 
Sbjct: 215 SMGNSLCSLYAK-LGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDML 273

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL----QQILAMVKKAGLLSDLYVGSALV 238
            +G    + PNE+T  S+++      L G+ L     +Q+ A   K G  ++L V ++ +
Sbjct: 274 MDG----VMPNEFTLTSVMS------LCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTM 323

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--------------RRKG--------- 275
             + R G    A ++FEQM   ++++ N ++ G              R +G         
Sbjct: 324 YLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRD 383

Query: 276 -----------------------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
                                        +++H   I+SG    V V + LVNMY KCG 
Sbjct: 384 LKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGC 443

Query: 307 IDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
           I D+   F  M  +  V+W +MISG  Q+G  +EAI  F  MR  G+  +  + +S LS+
Sbjct: 444 IQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSA 503

Query: 367 CASLGWI 373
           C+  G +
Sbjct: 504 CSYAGLV 510



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 189/390 (48%), Gaps = 18/390 (4%)

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           +  L  C  +G +   + +HG   K G  +D+ V+ +L++ Y   G      ++F  MPE
Sbjct: 82  VPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPE 141

Query: 421 HDQVSWNSVIGAFA-DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
            + V+W +++  +  +S+  +   ++ +++M   G  P+  T    L A  +     LG 
Sbjct: 142 RNVVTWTALVTGYTLNSQPAL--GLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGK 199

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           QVH   IKY   + T++ N+L S Y K G +D   + F R+ E ++ ++W +MIS    +
Sbjct: 200 QVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPE-KNVITWTTMISACAED 258

Query: 540 -ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
            E +   ++L   M+  G   + FT  +V+S C +   L  G +V A   +   E ++ +
Sbjct: 259 EECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPV 318

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR-----------HGHGDKAL 647
            ++ + +Y + G  D A R F+ M   ++ +WN+MISGYA+              G +AL
Sbjct: 319 KNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQAL 378

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDL 707
           T+F  +K     PD  TF  +LS CS    +++G +   + +   G +  +   S +V++
Sbjct: 379 TIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQG-EQIHAQTIKSGFLSDVVVNSALVNM 437

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVL 737
             + G +    +   +MP T   + W +++
Sbjct: 438 YNKCGCIQDANKAFLEMP-TRTFVTWTSMI 466



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 2/189 (1%)

Query: 552 MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR 611
           M+  G+ +    +  +L  C  + +L     VH    +     D+ + ++LV+ Y +CG 
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGA 128

Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
              A R FD MP RNV +W ++++GY  +      L +F +M   G  P H T    L+A
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188

Query: 672 CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
           C  +  VD G K     +  YG        + +  L  + G LD       ++P   N +
Sbjct: 189 CLASCDVDLG-KQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP-EKNVI 246

Query: 732 IWRTVLGAC 740
            W T++ AC
Sbjct: 247 TWTTMISAC 255


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  447 bits (1151), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 259/720 (35%), Positives = 403/720 (55%), Gaps = 24/720 (3%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMN------GLMEGRRKGKEVH 279
           DL+  + LV G+A+ G F  A  ++ +M    I+ +V +        G +    +G+EVH
Sbjct: 159 DLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVH 218

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
            ++IR G    V V N L+ MY KCG I  +R VF  M  +D +SWN MISG  +N    
Sbjct: 219 LHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCL 278

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           E +  F  MR   +     ++ S +S+C +LG   LG+++HG  +K G  ++VSV+N+L+
Sbjct: 279 EGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLI 338

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
            +++  G       VF  M   D VSW ++I  + +   L  +AV+ Y  M   G  P+ 
Sbjct: 339 QMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGY-EKNGLPEKAVETYTIMEHEGVVPDE 397

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           +T  ++L+A +   +   G  +H    +  + +   + N+L+  Y KC  +D   ++F R
Sbjct: 398 ITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHR 457

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR--GQRLDHFTFATVLSACASVATL 577
           +  + + +SW S+I G   N    ++   ++F  Q     + +  T  +VLSACA +  L
Sbjct: 458 IPNK-NVISWTSIILGLRLNY---RSFEALFFFQQMILSLKPNSVTLVSVLSACARIGAL 513

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
             G E+HA  +R  L FD  + +AL+DMY +CGR++ A   F+    ++V SWN +++GY
Sbjct: 514 SCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGY 572

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
           A+ G G  A+ LF +M      PD +TF  +L ACS +G+V +G ++F+SM   + + P 
Sbjct: 573 AQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPN 632

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
           L+ ++ +VDLLGRAG L+   EFI KMPI P+  IW  +L AC     +  ELG  AA  
Sbjct: 633 LKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNAC--RIYQNVELGELAAQH 690

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           +FEM+ ++   Y+LL N+YA  GKW++VA+ RK M+E  +  + GCSWV +   VH F+ 
Sbjct: 691 IFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLT 750

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL 877
           GD+ HP+   I   L+   +KM   G +  +K +  D    SK ++   HSE++A+AF L
Sbjct: 751 GDDFHPQIKEINAVLEGFYEKMEATG-LSMSKDSRRDDIDASKAEIFCGHSERLAIAFGL 809

Query: 878 TRN-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD--YW 934
                  PI + KNL +C +CH+  KFISK+V R I +RD+ +FHHF DG CSCGD  YW
Sbjct: 810 INTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGDEGYW 869



 Score =  235 bits (599), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 167/570 (29%), Positives = 283/570 (49%), Gaps = 40/570 (7%)

Query: 259 QKNVVSMNGLMEGRR---KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
           ++  +++  L E +R   +G  VH Y+ ++     V +GN L++M+ + G + ++  VF 
Sbjct: 94  EETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFG 153

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M  +D  SWN ++ G  + G ++EA+  +  M   G+    ++    L +C  L  +  
Sbjct: 154 KMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLAR 213

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G+++H   ++ G +SDV V NAL+++Y   G +     VF  MP  D++SWN++I  + +
Sbjct: 214 GREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFE 273

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           ++  + E ++ +  MR     P+ +T  ++++A  +    +LG +VH  VIK     E +
Sbjct: 274 NDVCL-EGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVS 332

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           + N+L+  +   G  D+ E +F++M E +D VSW +MISGY  N L  KA+     M   
Sbjct: 333 VNNSLIQMHSSVGCWDEAEMVFSKM-EFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHE 391

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G   D  T A+VLSACA +  L++G+ +H    R  L   V++ ++L+DMYSKC  ID A
Sbjct: 392 GVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKA 451

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC--- 672
              F  +P +NV SW S+I G   +    +AL  F QM L    P+ VT V VLSAC   
Sbjct: 452 LEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLK-PNSVTLVSVLSACARI 510

Query: 673 ----------SHAGLVDEGFKHF--KSMSQVY----GLIPQLEQF-SCMVDL-------- 707
                     +HA     GF  F   ++  +Y     + P   QF SC  D+        
Sbjct: 511 GALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLT 570

Query: 708 -LGRAGELDKIEEFINKM---PITPNSLIWRTVLGACCRANCRKTELGR-KAANMLFEME 762
              + G+     E  +KM    + P+ + + ++L AC R+      L   ++    F + 
Sbjct: 571 GYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIA 630

Query: 763 PQNAVNYVLLANMYASGGKWEDVAKARKAM 792
           P N  +Y  + ++    G+ ED  +  K M
Sbjct: 631 P-NLKHYASVVDLLGRAGRLEDAYEFIKKM 659



 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 155/558 (27%), Positives = 259/558 (46%), Gaps = 54/558 (9%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           V L N L++++VR GDL  A  +F +M +R+  SW  +V GY   G  +EA  ++  M+ 
Sbjct: 129 VRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLW 188

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
            G   + Y    VLR C   G      G +VH  V++     D  V N LI MY  C + 
Sbjct: 189 VGIRPDVYTFPCVLRTCG--GLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDI 246

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
              AR +F+ +  RD ISWN++IS Y +    +   +LF  M RE F   + P+  T  S
Sbjct: 247 FS-ARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFF-MMREFF---VDPDLMTMTS 301

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           +I+A     L    L +++   V K G ++++ V ++L+   + +G +  A  +F +M  
Sbjct: 302 VISAC--EALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEF 359

Query: 260 KNVVSMNGLMEGRR-----------------------------------------KGKEV 278
           K++VS   ++ G                                           KG  +
Sbjct: 360 KDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIML 419

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H +  R+GL   V V N L++MY+KC  ID +  VF  +  K+ +SW ++I GL  N   
Sbjct: 420 HEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRS 479

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
            EA+  F  M    L  ++ +L+S LS+CA +G +  G++IH   L+ GL  D  + NAL
Sbjct: 480 FEALFFFQQMIL-SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNAL 538

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           L +Y   G +      F    E D  SWN ++  +A  +     AV+ +  M  +  +P+
Sbjct: 539 LDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYA-QQGKGGLAVELFHKMIESDVNPD 596

Query: 459 GVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
            +TF ++L A S   M   G +   +   K+++A       +++   G+ G ++D  +  
Sbjct: 597 EITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFI 656

Query: 518 ARMSERRDEVSWNSMISG 535
            +M    D   W ++++ 
Sbjct: 657 KKMPIDPDPAIWGALLNA 674



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 220/445 (49%), Gaps = 6/445 (1%)

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N++I  L   G  E+A+++  +M+   +     + I+ L  C        G ++H    K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
                 V + NALLS++   G L     VF  M E D  SWN ++G +A +     EA+ 
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKA-GYFDEALN 181

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            Y  M   G  P+  TF  +L           G +VH  VI+Y   ++  + NAL++ Y 
Sbjct: 182 LYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           KCG++     +F RM  RRD +SWN+MISGY  N++  + + L + M +     D  T  
Sbjct: 242 KCGDIFSARLVFDRMP-RRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMT 300

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           +V+SAC ++     G EVH   ++     +V + ++L+ M+S  G  D A   F  M  +
Sbjct: 301 SVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFK 360

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
           ++ SW +MISGY ++G  +KA+  ++ M+ +G +PD +T   VLSAC+  GL+D+G    
Sbjct: 361 DLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIM-L 419

Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANC 745
              +   GL   +   + ++D+  +   +DK  E  +++P   N + W +++    R N 
Sbjct: 420 HEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILG-LRLNY 477

Query: 746 RKTELGRKAANMLFEMEPQNAVNYV 770
           R  E       M+  ++P N+V  V
Sbjct: 478 RSFEALFFFQQMILSLKP-NSVTLV 501



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 222/470 (47%), Gaps = 58/470 (12%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           HL ++++GF  DV + N LI +YV+ GD+ SA  +FD MP R+ +SW  ++SGY    + 
Sbjct: 218 HLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVC 277

Query: 68  NEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            E  ++F  M+R  F+  +   + SV+ AC+  G    + G +VH  V+K+    +  V+
Sbjct: 278 LEGLRLFF-MMREFFVDPDLMTMTSVISACEALGDE--RLGREVHGYVIKTGFVAEVSVN 334

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI M+ S +   D A  +F ++E +DL+SW ++IS Y + G      + ++ M+ EG 
Sbjct: 335 NSLIQMHSS-VGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEG- 392

Query: 187 RYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
              + P+E T  S+++A A   +L    +L +      + GL S + V ++L+  +++  
Sbjct: 393 ---VVPDEITIASVLSACAGLGLLDKGIMLHE---FADRTGLTSYVIVANSLIDMYSKCR 446

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------- 274
               A ++F ++  KNV+S   ++ G R                                
Sbjct: 447 CIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLSA 506

Query: 275 ---------GKEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                    GKE+H + +R+GL FD   + N L++MY +CG ++ + + F     KD  S
Sbjct: 507 CARIGALSCGKEIHAHALRTGLGFDGF-LPNALLDMYVRCGRMEPAWNQFN-SCEKDVAS 564

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEG 383
           WN +++G  Q G    A+  F  M    +     +  S L +C+  G +  G +      
Sbjct: 565 WNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESME 624

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            K  +  ++    +++ L   AG L    +    MP + D   W +++ A
Sbjct: 625 HKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNA 674


>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  447 bits (1151), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 252/664 (37%), Positives = 375/664 (56%), Gaps = 54/664 (8%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKC--GTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           ++HG ++RSG F    V   L+  YA       D +  VF  +   +   WN +I G  +
Sbjct: 51  QLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N    +AI  +  M  D    + F+  +   +C+    +  G+QIHG  +K G+ SDV +
Sbjct: 111 NNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            +A + +YA  G L    K+F+   E D V WN++I                        
Sbjct: 170 KSAGIHMYASFGRLEDARKMFY-SGESDVVCWNTMI------------------------ 204

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
              +G     +L AA           + AQ+   N+ +   + N L     K G + D  
Sbjct: 205 ---DGYLKCGVLEAAKG---------LFAQMPVKNIGSWNVMINGL----AKGGNLGDAR 248

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           K+F  MSER DE+SW+SM+ GYI      +A+ +   M +   R   F  ++VL+AC+++
Sbjct: 249 KLFDEMSER-DEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNI 307

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
             +++G  VHA   R  ++ D V+G+AL+DMY+KCGR+D     F+ M  R +++WN+MI
Sbjct: 308 GAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMI 367

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
            G A HG  + AL LFS+++     P+ +T VGVL+AC+HAG VD+G + F++M + YG+
Sbjct: 368 GGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGV 427

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRK 753
            P+LE + CMVDLLGR+G   + E+ IN MP+ PN+ +W  +LGAC    N    +L  +
Sbjct: 428 DPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNF---DLAER 484

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
              +L E+EPQN+  YVLL+N+YA  G+++DV+K RK MK+  +K   G S V +   VH
Sbjct: 485 VGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVH 544

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
            F  GD SHP+   IY KLK + ++++ AG+ P T   LFD++ E KE  V+YHSEK+A+
Sbjct: 545 EFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAI 604

Query: 874 AFVLTRNSKLP---IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           AF L   + LP   I I+KNLRVC DCHSA K IS+I  REI++RD  R+HHF +G CSC
Sbjct: 605 AFGLI--NTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSC 662

Query: 931 GDYW 934
            D+W
Sbjct: 663 KDFW 666



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 208/450 (46%), Gaps = 19/450 (4%)

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC-LESTDCARRIFEE 149
           +VL+       +  ++  Q+H LVL+S    D  VS  L+  Y +    + D A ++F  
Sbjct: 33  TVLKLFDSKSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSS 92

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
           I   ++  WN +I    +          + RM  +      +PN++T+ +L  A   SV 
Sbjct: 93  IPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-----RPNKFTYPTLFKAC--SVA 145

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
                 +QI   V K G+ SD+++ SA +  +A  G    ARK+F    + +VV  N ++
Sbjct: 146 QAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSG-ESDVVCWNTMI 204

Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVGN-----GLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
           +G  K   +       GLF  + V N      ++N  AK G + D+R +F  M  +D +S
Sbjct: 205 DGYLKCGVLEA---AKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEIS 261

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W++M+ G    G Y+EA+  F  M+R+      F L S L++C+++G I  G+ +H    
Sbjct: 262 WSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLK 321

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           +  +  D  +  ALL +YA  G L    +VF  M E +  +WN++IG  A       +A+
Sbjct: 322 RNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLA-IHGRAEDAL 380

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSC 503
           + +  ++     PNG+T + +L A +       G ++   + + Y V  E      ++  
Sbjct: 381 ELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDL 440

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            G+ G   + E +   M  + +   W +++
Sbjct: 441 LGRSGLFSEAEDLINSMPMKPNAAVWGALL 470



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 154/330 (46%), Gaps = 23/330 (6%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N +IN   + G+L  A KLFDEM +R+ +SW+ +V GY   G   EA ++F++M R    
Sbjct: 232 NVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETR 291

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
             R+ L SVL AC   G      G  VH  + +++   D ++   L+ MY  C    D  
Sbjct: 292 PGRFILSSVLAACSNIG--AIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKC-GRLDMG 348

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
             +FEE++ R++ +WN++I   +  G      +LFS++Q EG    +KPN  T   ++TA
Sbjct: 349 WEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQ-EG---RMKPNGITLVGVLTA 404

Query: 204 -AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
            A++  +     + Q   M +  G+  +L     +V    R G F  A  +   M  K  
Sbjct: 405 CAHAGFVDKGLRIFQ--TMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPN 462

Query: 263 VSMNGLMEGRRKGKEVHGYL-----IRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSV 313
            ++ G + G  +   +HG       +   L ++    +G    L N+YAK G  DD   +
Sbjct: 463 AAVWGALLGACR---IHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKI 519

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
            + M  +  +     +S +D NG   E  M
Sbjct: 520 RKLMKDR-GIKTVPGVSIVDLNGTVHEFKM 548



 Score = 46.2 bits (108), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 43/93 (46%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  + ++    D  L   L+++Y + G L    ++F+EM +R   +W  ++ G    G +
Sbjct: 317 HAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRA 376

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            +A ++F ++       N   L  VL AC   G
Sbjct: 377 EDALELFSKLQEGRMKPNGITLVGVLTACAHAG 409


>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
 gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/731 (33%), Positives = 383/731 (52%), Gaps = 73/731 (9%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           K  + H  +++SG  +   +   L+  Y+     +D+  V + +      S++++I  L 
Sbjct: 33  KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           +   + ++I  F  M   GL+  +  L +    CA L    +G+QIH      GLD D  
Sbjct: 93  KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQV----------------------------- 424
           V  ++  +Y   G +    KVF  M + D V                             
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212

Query: 425 ------SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
                 SWN ++  F  S     EAV  +  +   G+ P+ VT  ++L +     M  +G
Sbjct: 213 IEANIVSWNGILSGFNRS-GYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEM---------------------------- 510
             +H  VIK  +  +  + +A++  YGK G +                            
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331

Query: 511 ---DDCEKIFARMSERRDE---VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
              D   ++F    E+  E   VSW S+I+G   N    +A+ L   M   G + +H T 
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
            ++L AC ++A L  G   H   VR  L  +V +GSAL+DMY+KCGRI+ +   F++MP 
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           +N+  WNS+++G++ HG   + +++F  +      PD ++F  +LSAC   GL DEG+K+
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           FK MS+ YG+ P+LE +SCMV+LLGRAG+L +  + I +MP  P+S +W  +L +C   N
Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQN 571

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
               +L   AA  LF +EP+N   YVLL+N+YA+ G W +V   R  M+   +KK  GCS
Sbjct: 572 --NVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLV 864
           W+ +K+ V+  +AGD+SHP+ D I EK+ E++++MR +G+ P   FAL D+E + +E ++
Sbjct: 630 WIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQML 689

Query: 865 SYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
             HSEK+AV F +L      P++++KNLR+CGDCH+  KFIS   GREI +RD+NRFHHF
Sbjct: 690 WGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHF 749

Query: 924 NDGKCSCGDYW 934
            DG CSCGD+W
Sbjct: 750 KDGICSCGDFW 760



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 116/545 (21%), Positives = 248/545 (45%), Gaps = 35/545 (6%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H +ILK G   D ++   LI  Y        A  +   +PD    S++ ++   T   + 
Sbjct: 38  HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            ++  +F  M   G + + + L ++ + C E   S FK G Q+HC+   S    D  V  
Sbjct: 98  TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAEL--SAFKVGKQIHCVSCVSGLDMDAFVQG 155

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            +  MY  C    D AR++F+ +  +D+++ ++++  Y+++G    V ++ S M+  G  
Sbjct: 156 SMFHMYMRCGRMGD-ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214

Query: 188 YSLKPNEYTFGSLITAAYSSVLSG---SYLLQQILAMVKKA---GLLSDLYVGSALV--- 238
            ++             +++ +LSG   S   ++ + M +K    G   D    S+++   
Sbjct: 215 ANI------------VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSV 262

Query: 239 --SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVG-- 294
             S    +G   +   + +Q + K+   ++ +++   K   V+G +     F+M+  G  
Sbjct: 263 GDSEMLNMGRLIHGY-VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVC 321

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGK----DSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           N  +   ++ G +D +  +F     +    + VSW ++I+G  QNG   EA+  F  M+ 
Sbjct: 322 NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV 381

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
            G+  ++ ++ S L +C ++  +  G+  HG  +++ L  +V V +AL+ +YA  G ++ 
Sbjct: 382 AGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINL 441

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
              VF +MP  + V WNS++  F+       E +  +  + R    P+ ++F ++L+A  
Sbjct: 442 SQIVFNMMPTKNLVCWNSLMNGFS-MHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACG 500

Query: 471 SFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
              +   G +    +  +Y +       + +++  G+ G++ +   +   M    D   W
Sbjct: 501 QVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVW 560

Query: 530 NSMIS 534
            ++++
Sbjct: 561 GALLN 565



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 132/561 (23%), Positives = 246/561 (43%), Gaps = 90/561 (16%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYG--SCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           Q H  +LKS    DG +S  LIA Y   +C    D    + + I    + S++S+I   +
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADL---VLQSIPDPTIYSFSSLIYALT 92

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
           +         +FSRM    F + L P+ +   +L      + LS   + +QI  +   +G
Sbjct: 93  KAKLFTQSIGVFSRM----FSHGLIPDSHVLPNLFKVC--AELSAFKVGKQIHCVSCVSG 146

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSG 286
           L  D +V  ++   + R G    ARK+F++M  K+VV+ + L+                 
Sbjct: 147 LDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA--------------- 191

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAI 342
                         YA+ G +++   +   M    I  + VSWN ++SG +++G ++EA+
Sbjct: 192 --------------YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAV 237

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
           + F  +   G      ++ S L S      + +G+ IHG  +K GL  D  V +A++ +Y
Sbjct: 238 VMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMY 297

Query: 403 ADAGY-------------------------------LSRCLKVFFLMPEH----DQVSWN 427
             +G+                               + + L++F L  E     + VSW 
Sbjct: 298 GKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWT 357

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           S+I   A +   + EA++ + +M+ AG  PN VT  ++L A  + +    G   H   ++
Sbjct: 358 SIIAGCAQNGKDI-EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVR 416

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
            ++ +   + +AL+  Y KCG ++  + +F  M   ++ V WNS+++G+  +    + M+
Sbjct: 417 VHLLDNVHVGSALIDMYAKCGRINLSQIVF-NMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERG-----MEVHACGVRACLEFDVVIGSAL 602
           +   +M+   + D  +F ++LSAC  V   + G     M     G++  LE      S +
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY----SCM 531

Query: 603 VDMYSKCGRIDYASRFFDLMP 623
           V++  + G++  A      MP
Sbjct: 532 VNLLGRAGKLQEAYDLIKEMP 552



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 167/420 (39%), Gaps = 88/420 (20%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR------------ 49
           K  K  H      G   D F+  ++ ++Y+R G +  A K+FD M D+            
Sbjct: 133 KVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAY 192

Query: 50  -----------------------NSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNR 86
                                  N VSW  I+SG+   G   EA  MF+++   GF  ++
Sbjct: 193 ARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQ 252

Query: 87  YALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC---------- 136
             + SVL +  +        G  +H  V+K     D  V + +I MYG            
Sbjct: 253 VTVSSVLPSVGD--SEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310

Query: 137 -----LESTDC---------------ARRIFEEIETR----DLISWNSIISVYSQRGDTI 172
                +E+  C               A  +FE  + +    +++SW SII+  +Q G  I
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370

Query: 173 SVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLY 232
              +LF  MQ  G    +KPN  T  S++ A  +    G        A+  +  LL +++
Sbjct: 371 EALELFREMQVAG----VKPNHVTIPSMLPACGNIAALGHGRSTHGFAV--RVHLLDNVH 424

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGY---LIRSG 286
           VGSAL+  +A+ G    ++ +F  M  KN+V  N LM G     K KEV      L+R+ 
Sbjct: 425 VGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR 484

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA 341
           L         L++   + G  D+    F+ M     I      ++ M++ L + G  +EA
Sbjct: 485 LKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEA 544


>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1111

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 310/956 (32%), Positives = 499/956 (52%), Gaps = 60/956 (6%)

Query: 17   AYDVFLCNT-LINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFK 75
            +Y  F+C T ++    R GD+A A KLF+ MP+++ ++W  ++SGY   G S EA  +F 
Sbjct: 178  SYPDFVCRTAMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFH 237

Query: 76   EMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS 135
             M   G  +N  ++ SVL AC + G      G   H  + ++       +   L+ +Y  
Sbjct: 238  LMQLEGVKVNGVSMISVLSACTQLG--ALDQGRWAHSYIERNKIKITVRLGTTLVDLYAK 295

Query: 136  CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
            C +  D A  +F  +E +++ +W+S ++  +  G      KLFS M+++G    + PN  
Sbjct: 296  CGD-MDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDG----VTPNAV 350

Query: 196  TFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKI 253
            TF S++   +    V  G    +   +M  + G+   L     LV  +AR G    A  I
Sbjct: 351  TFVSVLRGCSVVGFVDEGQ---KHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSI 407

Query: 254  FEQMIQK-NVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAKCGTI 307
             +QM  K +    + L+   R  K +  G L    + ++    +G    L N+YA     
Sbjct: 408  IQQMPMKAHAAVWSSLLHASRMYKNLELGVLASKKMLELETSNHGAYVLLSNIYADSDDW 467

Query: 308  DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
            D+   V + M  K  V      S ++ NG   E  +   +  +   + + +  IS     
Sbjct: 468  DNVSHVRQSMKSK-GVRKQPGCSVMEVNGEVHEFFVGDKSHPKYNEIDAVWKDISRRLRL 526

Query: 368  A----SLGWIMLGQQIHGEGLKLGLDSD-VSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
            A        +M       +   L L S+  +++  ++SL AD     R +K   +  +  
Sbjct: 527  AGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKADVPI--RIVKNLRVCGDCH 584

Query: 423  QVS------WNSVI--------GAFADSEALVSEAVKYYLDMRRA--GWSPNGVTFINIL 466
            QVS      +N  I          F D    + +  +    M R+  G+ PN VTF++++
Sbjct: 585  QVSMMISKIFNREIIVRDRNRFHHFKDGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMI 644

Query: 467  AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
            +A       + G  +H  V+K  V  E  + NAL++ YGK G++    K+F  +S + + 
Sbjct: 645  SACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVK-NL 703

Query: 527  VSWNSMISGYIHNELLPKAMNLVWFMMQR--GQRLDHFTFATVLSACASVATLERGMEVH 584
            VSWN+MI  ++ N L  +   L +F M R  G + D  TF  VL  C  +  +     +H
Sbjct: 704  VSWNTMIVIHLQNGLAEEG--LAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIH 761

Query: 585  A----CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
                 CG  A    +  I +AL+D+Y+K GR++ +S  F  +   +  +W +M++ YA H
Sbjct: 762  GLIMFCGFNA----NTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATH 817

Query: 641  GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
            G+G  A+  F  M   G  PDHVTF  +L+ACSH+GLV+EG  +F++MS+ Y + P+L+ 
Sbjct: 818  GYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDH 877

Query: 701  FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
            +SCMVDL+GR+G L      I +MP+ P+S +W  +LGAC     + T+LG KAA  LFE
Sbjct: 878  YSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGAC--RVYKDTQLGTKAAKRLFE 935

Query: 761  MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
            +EP++  NY++L+N+Y++ G W+D ++ R  MK+  + + +G S++   + +H FV GD 
Sbjct: 936  LEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDW 995

Query: 821  SHPEKDLIYEKLKELNQKMR-DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR 879
            SHPE + I +KLKE+ +KM+ + G+  +T+F L D++ + KE++++ HSEKIA+AF L  
Sbjct: 996  SHPESEKIQKKLKEIRKKMKSELGFKSRTEFVLHDVDEDVKEEMINQHSEKIAMAFGLLV 1055

Query: 880  NSKL-PIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             S + PI I KNLR+CGDCH   K IS I  R I++RDS RFHHF +G CSC DYW
Sbjct: 1056 ISPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLEGSCSCRDYW 1111



 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 194/509 (38%), Positives = 289/509 (56%), Gaps = 33/509 (6%)

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G  P+  T   ++ A +   M + G QVH   I+    N+  ++  L+S Y + G +D C
Sbjct: 111 GLKPDNYTVNFLVQACTGLGMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSC 170

Query: 514 EKIFARMS------------------------------ERRDEVSWNSMISGYIHNELLP 543
            K+F  +S                                +D ++WN+MISGY       
Sbjct: 171 HKVFNSVSYPDFVCRTAMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESR 230

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +A+NL   M   G +++  +  +VLSAC  +  L++G   H+   R  ++  V +G+ LV
Sbjct: 231 EALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLV 290

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           D+Y+KCG +D A   F  M  +NVY+W+S ++G A +G G+K L LFS MK DG  P+ V
Sbjct: 291 DLYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAV 350

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TFV VL  CS  G VDEG KHF SM   +G+ PQL+ + C+VDL  RAG L+     I +
Sbjct: 351 TFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQ 410

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           MP+  ++ +W ++L A      +  ELG  A+  + E+E  N   YVLL+N+YA    W+
Sbjct: 411 MPMKAHAAVWSSLLHAS--RMYKNLELGVLASKKMLELETSNHGAYVLLSNIYADSDDWD 468

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
           +V+  R++MK   V+K+ GCS + +   VH F  GD+SHP+ + I    K++++++R AG
Sbjct: 469 NVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYNEIDAVWKDISRRLRLAG 528

Query: 844 YVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFK 902
           Y   T   +FD++ E KED +  HSEK A+AF +++  + +PIRI+KNLRVCGDCH    
Sbjct: 529 YKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKADVPIRIVKNLRVCGDCHQVSM 588

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCG 931
            ISKI  REI++RD NRFHHF DG+   G
Sbjct: 589 MISKIFNREIIVRDRNRFHHFKDGRGYLG 617



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 147/318 (46%), Gaps = 37/318 (11%)

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
           +GL   N+++   + +C  LG    G Q+HG  ++ G D+D  V   L+SLYA+ G L  
Sbjct: 110 NGLKPDNYTVNFLVQACTGLGMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDS 169

Query: 411 CLKVF-------FL------------------------MPEHDQVSWNSVIGAFADSEAL 439
           C KVF       F+                        MPE D ++WN++I  +A     
Sbjct: 170 CHKVFNSVSYPDFVCRTAMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQV-GE 228

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
             EA+  +  M+  G   NGV+ I++L+A +       G   H+ + +  +     +   
Sbjct: 229 SREALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTT 288

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  Y KCG+MD   ++F  M E ++  +W+S ++G   N    K + L   M Q G   
Sbjct: 289 LVDLYAKCGDMDKAMEVFWGM-EEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTP 347

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG--SALVDMYSKCGRIDYASR 617
           +  TF +VL  C+ V  ++ G + H   +R     +  +     LVD+Y++ GR++ A  
Sbjct: 348 NAVTFVSVLRGCSVVGFVDEGQK-HFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVS 406

Query: 618 FFDLMPVR-NVYSWNSMI 634
               MP++ +   W+S++
Sbjct: 407 IIQQMPMKAHAAVWSSLL 424



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 35/295 (11%)

Query: 272 RRKGKEVHGYLIRSGLFDMVAVGNGLVNMY------------------------------ 301
           R  G +VHG  IR G  +   V  GL+++Y                              
Sbjct: 132 RETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTA 191

Query: 302 -AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
            A+CG +  +R +F  M  KD ++WN MISG  Q G   EA+  F  M+ +G+  +  S+
Sbjct: 192 CARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSM 251

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           IS LS+C  LG +  G+  H    +  +   V +   L+ LYA  G + + ++VF+ M E
Sbjct: 252 ISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEE 311

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            +  +W+S +   A       + +K +  M++ G +PN VTF+++L   S       G Q
Sbjct: 312 KNVYTWSSALNGLA-MNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-Q 369

Query: 481 VHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            H   ++     E  +++   L+  Y + G ++D   I  +M  +     W+S++
Sbjct: 370 KHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLL 424



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 111/244 (45%), Gaps = 25/244 (10%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  ++K G   +V + N L+N+Y + GDL S+ KLF+++  +N VSW  ++  +   G+
Sbjct: 659 IHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGL 718

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           + E    F      G   ++    +VLR C++ G    +    +H L++      +  ++
Sbjct: 719 AEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGV--VRLSQGIHGLIMFCGFNANTCIT 776

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
             L+ +Y   L   + +  +F EI + D ++W ++++ Y+  G      K F  M     
Sbjct: 777 TALLDLYAK-LGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELM----V 831

Query: 187 RYSLKPNEYTFGSLITAA-----------YSSVLSGSYLLQQ-------ILAMVKKAGLL 228
            Y L P+  TF  L+ A            Y   +S  Y ++        ++ ++ ++GLL
Sbjct: 832 HYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLL 891

Query: 229 SDLY 232
            D Y
Sbjct: 892 QDAY 895



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 45/93 (48%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  I ++     V L  TL+++Y + GD+  A ++F  M ++N  +W+  ++G    G  
Sbjct: 271 HSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMNGFG 330

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            +  K+F  M + G   N     SVLR C   G
Sbjct: 331 EKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVG 363



 Score = 43.9 bits (102), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 81/174 (46%), Gaps = 13/174 (7%)

Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM--KLDGPLPDHVTFVGVL 669
           +DYA++  D      +++ NSMI  + +    +K+   +S++    +G  PD+ T   ++
Sbjct: 64  LDYANQILDRSDKPTLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLV 123

Query: 670 SACSHAGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITP 728
            AC+  G+ + G + H  ++ + +   P ++  + ++ L    G LD   +  N   ++ 
Sbjct: 124 QACTGLGMRETGLQVHGMTIRRGFDNDPHVQ--TGLISLYAELGCLDSCHKVFNS--VSY 179

Query: 729 NSLIWRTVLGACCRANCRKTELGRKAANMLFE-MEPQNAVNYVLLANMYASGGK 781
              + RT +   C A C      RK    LFE M  ++ + +  + + YA  G+
Sbjct: 180 PDFVCRTAMVTAC-ARCGDVAFARK----LFEGMPEKDPIAWNAMISGYAQVGE 228


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 258/711 (36%), Positives = 395/711 (55%), Gaps = 44/711 (6%)

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGLFDMVAVG 294
           +S FARLG    AR IF+ +  K V S N ++ G    ++  E      +    + ++  
Sbjct: 23  ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTIS-W 81

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           NGLV+ Y K G I ++R VF  M  ++ VSW +M+ G  Q G  +EA + F  M    ++
Sbjct: 82  NGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVV 141

Query: 355 SSNFSLISTLSSCASLGW-IMLGQQIHG----EGLKLGLD----SDVSVSNALLSLYADA 405
           S                W +MLG  I      E  +L  D     DV  S  ++      
Sbjct: 142 S----------------WTVMLGGLIEDGRVDEARRL-FDMIPVKDVVASTNMIGGLCSE 184

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
           G LS   ++F  MP+ + V+W S+I  +A +   V  A K +  M       N VT+  +
Sbjct: 185 GRLSEAREIFDEMPQRNVVAWTSMISGYAMNNK-VDVARKLFEVMP----DKNEVTWTAM 239

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           L   +    G++     A++ K          N ++  +G  GE+     +F +M E+ D
Sbjct: 240 LKGYTR--SGRINEA--AELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEK-D 294

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
           + +W+++I  Y       +A+ L   M + G R +  +  ++LS C S+A+L+ G +VH+
Sbjct: 295 DGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHS 354

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
             VR+  + D+ + S L+ MY KCG +    R FD    +++  WNS+I+GYA+HG G+K
Sbjct: 355 QLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEK 414

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
           AL +F +M   G  PD +TF+GVLSAC + G V EG + F+SM   Y +  + E ++CMV
Sbjct: 415 ALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMV 474

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN 765
           DLLGRAG+L++    I  MP+  ++++W  +L AC     +  +L   AA  L ++EP +
Sbjct: 475 DLLGRAGKLNEAMNLIENMPVEADAIVWGALLSAC--RTHKNLDLAEIAAKKLLQLEPSS 532

Query: 766 AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV-AGDESHPE 824
           A  Y+LL+N+YAS  +W+DVA+ RK M+   V K  GCSW+ + + VH+F   G  SHPE
Sbjct: 533 AGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPE 592

Query: 825 KDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR-NSKL 883
            ++I +KL++L   +R+AGY P   F + D++ E K   + +HSEK+AVA+ L +     
Sbjct: 593 HEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGK 652

Query: 884 PIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           PIR+MKNLRVCGDCHSA K I+++ GREI+LRD+NRFHHF DG CSC D+W
Sbjct: 653 PIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLCSCRDFW 703



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 132/520 (25%), Positives = 237/520 (45%), Gaps = 70/520 (13%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N ++  Y      A A KLFD+MP+RN++SW  +VSGY   GM +EA K+F +M      
Sbjct: 51  NAIVAGYFHNKRPAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPER--- 107

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA---MYGSCLES- 139
            N  +  S++R   + G            L+ ++   F  +    +++   M G  +E  
Sbjct: 108 -NVVSWTSMVRGYVQEG------------LIDEAELLFWRMPEKNVVSWTVMLGGLIEDG 154

Query: 140 -TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             D ARR+F+ I  +D+++  ++I      G      ++F  M +               
Sbjct: 155 RVDEARRLFDMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRN------------- 201

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
                A++S++SG        AM  K  +                      ARK+FE M 
Sbjct: 202 ---VVAWTSMISG-------YAMNNKVDV----------------------ARKLFEVMP 229

Query: 259 QKNVVSMNGLMEGRRKGKEVH--GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
            KN V+   +++G  +   ++    L ++     VA  NG++  +   G +  +R VF  
Sbjct: 230 DKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQ 289

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M  KD  +W+ +I   ++ G   EA+  F  M+R+G+  +  S+IS LS C SL  +  G
Sbjct: 290 MKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHG 349

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +Q+H + ++   D D+ VS+ L+++Y   G L    +VF      D V WNS+I  +A  
Sbjct: 350 RQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYA-Q 408

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV-HAQVIKYNVANETT 495
                +A++ + +M  +G +P+ +TFI +L+A       K G ++  +   KY V  +T 
Sbjct: 409 HGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTE 468

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
               ++   G+ G++++   +   M    D + W +++S 
Sbjct: 469 HYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSA 508



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 149/335 (44%), Gaps = 28/335 (8%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV     +I      G L+ A ++FDEMP RN V+W  ++SGY      + A K+F+ M 
Sbjct: 170 DVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMP 229

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
                 N     ++L+     G       +     + K+         N +I  +G   E
Sbjct: 230 DK----NEVTWTAMLKGYTRSGR------INEAAELFKAMPVKPVAACNGMIMGFGLNGE 279

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
               AR +F++++ +D  +W+++I +Y ++G  +    LFS MQREG R    PN  +  
Sbjct: 280 -VGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVR----PNFPSII 334

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           S+++   S  L+     +Q+ + + ++    D+YV S L++ + + G+    +++F++  
Sbjct: 335 SILSVCGS--LASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFS 392

Query: 259 QKNVVSMNGLMEGR------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
            K++V  N ++ G        K  EV   +  SG         G+++     G + +   
Sbjct: 393 SKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLE 452

Query: 313 VFRFMIGKDSVSWNT-----MISGLDQNGCYEEAI 342
           +F  M  K  V   T     M+  L + G   EA+
Sbjct: 453 IFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAM 487



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 50/93 (53%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q+++  F  D+++ + LI +Y++ GDL +  ++FD    ++ V W  I++GY   G  
Sbjct: 353 HSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFG 412

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            +A ++F EM  +G   +      VL AC   G
Sbjct: 413 EKALEVFHEMFSSGAAPDEITFIGVLSACGYTG 445



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 22/224 (9%)

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
           R+       I    +  +++ G+ID A   FD +  + V SWN++++GY  +    +A  
Sbjct: 9   RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQK 68

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           LF +M    P  + +++ G++S     G++ E  K F  M +       +  ++ MV   
Sbjct: 69  LFDKM----PERNTISWNGLVSGYVKNGMISEARKVFDKMPE-----RNVVSWTSMVRGY 119

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR-KAANMLFEMEPQNAV 767
            + G +D+ E    +MP   N + W  +LG          E GR   A  LF+M P   V
Sbjct: 120 VQEGLIDEAELLFWRMP-EKNVVSWTVMLGGL-------IEDGRVDEARRLFDMIPVKDV 171

Query: 768 NYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
             V   NM         +++AR+     E+ +    +W +M  G
Sbjct: 172 --VASTNMIGGLCSEGRLSEAREIFD--EMPQRNVVAWTSMISG 211


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 252/758 (33%), Positives = 404/758 (53%), Gaps = 48/758 (6%)

Query: 220 AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ-------------------K 260
           A +    L +D +V + LV  ++ L +   AR +F+Q  Q                   +
Sbjct: 53  AQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYR 112

Query: 261 NVVSMNGLMEGR----------------------RKGKEVHGYLIRSGLFDMVAVGNGLV 298
             + + GLM  R                        G E+    +  G+     VG+ ++
Sbjct: 113 ETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMI 172

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
           +   K G I +++ VF  M  KD V WN++I G  Q GC++ A   F  M   G+  S  
Sbjct: 173 SFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPI 232

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           ++ S + +C  +G + LG+ +HG  L LGL +D+ V  + + +Y+  G +     VF+ M
Sbjct: 233 TMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKM 292

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
           P  + VSWN++I     +  LV E+   +  + R+    +  T +++L   S  +    G
Sbjct: 293 PTRNLVSWNAMISGCVRN-GLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATG 351

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
             +H   I+   +N   +  A++  Y KCG +     +F RM +R + ++W +M+ G   
Sbjct: 352 KILHGCAIRSFESN-LILSTAIVDLYSKCGSLKQATFVFNRMKDR-NVITWTAMLVGLAQ 409

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
           N     A+ L   M + G   +  TF +++ +CA + +L+RG  +H    R    FD+V 
Sbjct: 410 NGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVN 469

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
            +ALVDMY+KCG+I+ A R F    + ++V  WNSMI+GY  HGHG +A+ ++ +M  +G
Sbjct: 470 MTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEG 529

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
             P+  TF+ +LSACSH+ LV++G   F SM + + + P  + ++C+VDLL RAG  ++ 
Sbjct: 530 LKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEA 589

Query: 718 EEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYA 777
           +  I KMP  P + +   +L   CR + +   LG + ++ L  ++  N   Y++L+N+YA
Sbjct: 590 QALIEKMPFQPGTAVLEALLSG-CRTH-KNINLGIQTSDKLLALDAMNPGIYIMLSNIYA 647

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
              +W+ V   R  M+   +KK  G S V   + VH F AGD SHP  + IY  L+ L  
Sbjct: 648 EARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRS 707

Query: 838 KMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGD 896
            +  +GYVP T   L D++ E K  ++  HSE++A+AF +LT  +   IRI KNLRVCGD
Sbjct: 708 AVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRITKNLRVCGD 767

Query: 897 CHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CH+  K+ISKIV REI++RD+NRFHHF++G+CSCGDYW
Sbjct: 768 CHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 237/462 (51%), Gaps = 4/462 (0%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           K  H  +I + L     V   LV  Y+   +++ +R VF        +  N M+ G  Q+
Sbjct: 49  KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQS 108

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G Y E +  F  MR   L   + S    L +CAS     +G +I    ++ G++ +  V 
Sbjct: 109 GRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVG 168

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           ++++S     G +    +VF  MP  D V WNS+IG +  +      A + + +M  +G 
Sbjct: 169 SSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQA-GCFDVAFQLFFEMHGSGI 227

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            P+ +T  +++ A       KLG  +H  V+   + N+  +  + +  Y K G+++    
Sbjct: 228 KPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARW 287

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F +M   R+ VSWN+MISG + N L+ ++ +L   +++     D  T  ++L  C+  A
Sbjct: 288 VFYKMPT-RNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTA 346

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
           +L  G  +H C +R+  E ++++ +A+VD+YSKCG +  A+  F+ M  RNV +W +M+ 
Sbjct: 347 SLATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLV 405

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
           G A++GH + AL LF+QM+ +G   + VTFV ++ +C+H G +  G      + ++ G  
Sbjct: 406 GLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRL-GFA 464

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
             +   + +VD+  + G+++  E   +   I+ + ++W +++
Sbjct: 465 FDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMI 506



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 138/576 (23%), Positives = 261/576 (45%), Gaps = 64/576 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H QI+ +  + D F+   L+  Y  +  L +A  +FD+      +    ++ GY   G  
Sbjct: 52  HAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRY 111

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            E  ++F  M      ++  +    L+AC       ++ GM++    ++     +  V +
Sbjct: 112 RETLELFGLMRSRNLEVDSCSCTFALKACAS--SLDYEMGMEIISSAVEKGMEKNRFVGS 169

Query: 128 VLIAM---YGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
            +I+    +G   E    A+R+F+ +  +D++ WNSII  Y Q G     F+LF  M   
Sbjct: 170 SMISFLVKFGKIGE----AQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGS 225

Query: 185 GFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           G    +KP+  T  SLI A     ++  G  +   +L +    GL +D+ V ++ V  ++
Sbjct: 226 G----IKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGL----GLGNDILVLTSFVDMYS 277

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---------------------------- 274
           ++G+   AR +F +M  +N+VS N ++ G  +                            
Sbjct: 278 KMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVS 337

Query: 275 -------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                        GK +HG  IRS   +++ +   +V++Y+KCG++  +  VF  M  ++
Sbjct: 338 LLQGCSQTASLATGKILHGCAIRSFESNLI-LSTAIVDLYSKCGSLKQATFVFNRMKDRN 396

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            ++W  M+ GL QNG  E+A+  F  M+ +G+ +++ + +S + SCA LG +  G+ IHG
Sbjct: 397 VITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHG 456

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALV 440
              +LG   D+    AL+ +YA  G ++   ++F       D V WNS+I  +       
Sbjct: 457 HLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYG-MHGHG 515

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENA 499
            +AV  Y  M   G  PN  TF+++L+A S   + + G  +   + + +N+         
Sbjct: 516 YQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYAC 575

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           L+    + G  ++ + +  +M  +       +++SG
Sbjct: 576 LVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSG 611



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 121/262 (46%), Gaps = 3/262 (1%)

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
            HAQ+I  +++ +  +   L+  Y     ++    +F +  + +  +  N+M+ GY+ + 
Sbjct: 51  THAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLC-NAMLCGYLQSG 109

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
              + + L   M  R   +D  +    L ACAS    E GME+ +  V   +E +  +GS
Sbjct: 110 RYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGS 169

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           +++    K G+I  A R FD MP ++V  WNS+I GY + G  D A  LF +M   G  P
Sbjct: 170 SMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKP 229

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
             +T   ++ AC   G +  G K         GL   +   +  VD+  + G+++     
Sbjct: 230 SPITMTSLIQACGGIGNLKLG-KCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWV 288

Query: 721 INKMPITPNSLIWRTVLGACCR 742
             KMP T N + W  ++  C R
Sbjct: 289 FYKMP-TRNLVSWNAMISGCVR 309



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 141/283 (49%), Gaps = 17/283 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  +L  G   D+ +  + +++Y ++GD+ SA  +F +MP RN VSW  ++SG 
Sbjct: 248 KLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGC 307

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G+  E+  +F  +VR+    +   + S+L+ C +   +    G  +H   ++S ++ 
Sbjct: 308 VRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQ--TASLATGKILHGCAIRSFES- 364

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           + ++S  ++ +Y  C  S   A  +F  ++ R++I+W +++   +Q G      +LF++M
Sbjct: 365 NLILSTAIVDLYSKC-GSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQM 423

Query: 182 QREGFRYSLKPNEYTFGSLI--TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           Q EG    +  N  TF SL+   A   S+  G    + I   + + G   D+   +ALV 
Sbjct: 424 QEEG----IAANSVTFVSLVHSCAHLGSLKRG----RSIHGHLFRLGFAFDIVNMTALVD 475

Query: 240 GFARLGNFYYARKIFEQ-MIQKNVVSMNGLMEGRRKGKEVHGY 281
            +A+ G    A +IF    I K+VV  N ++ G   G   HGY
Sbjct: 476 MYAKCGKINLAERIFSHGSISKDVVLWNSMITGY--GMHGHGY 516


>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
 gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
 gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 705

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 256/693 (36%), Positives = 386/693 (55%), Gaps = 62/693 (8%)

Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN-----GLVNMYAKC 304
           ARK+F++M  +N++S NGL+ G  K  E+        +FD++   N      LV  Y   
Sbjct: 67  ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEA---RKVFDLMPERNVVSWTALVKGYVHN 123

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G +D + S+F  M  K+ VSW  M+ G  Q+G  ++A    C +        N +  S +
Sbjct: 124 GKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDA----CKLYEMIPDKDNIARTSMI 179

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
                 G +   ++I  E      +  V     +++ Y     +    K+F +MPE  +V
Sbjct: 180 HGLCKEGRVDEAREIFDEMS----ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV 235

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           SW S++                       G+  NG     I  A   F +  +   +   
Sbjct: 236 SWTSML----------------------MGYVQNG----RIEDAEELFEVMPVKPVIAC- 268

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
                        NA++S  G+ GE+    ++F  M ER D  SW ++I  +  N    +
Sbjct: 269 -------------NAMISGLGQKGEIAKARRVFDSMKERND-ASWQTVIKIHERNGFELE 314

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
           A++L   M ++G R    T  ++LS CAS+A+L  G +VHA  VR   + DV + S L+ 
Sbjct: 315 ALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMT 374

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHV 663
           MY KCG +  +   FD  P +++  WNS+ISGYA HG G++AL +F +M L G   P+ V
Sbjct: 375 MYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 434

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TFV  LSACS+AG+V+EG K ++SM  V+G+ P    ++CMVD+LGRAG  ++  E I+ 
Sbjct: 435 TFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDS 494

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           M + P++ +W ++LGA CR +  + ++    A  L E+EP+N+  Y+LL+NMYAS G+W 
Sbjct: 495 MTVEPDAAVWGSLLGA-CRTHS-QLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWA 552

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD-ESHPEKDLIYEKLKELNQKMRDA 842
           DVA+ RK MK   V+K  GCSW  +++ VH F  G   SHPE++ I + L EL+  +R+A
Sbjct: 553 DVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREA 612

Query: 843 GYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAF 901
           GY P   +AL D++ E K + + YHSE++AVA+ L + S+ +PIR+MKNLRVC DCH+A 
Sbjct: 613 GYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAI 672

Query: 902 KFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           K ISK+  REI+LRD+NRFHHF +G+CSC DYW
Sbjct: 673 KIISKVKEREIILRDANRFHHFRNGECSCKDYW 705



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 233/519 (44%), Gaps = 49/519 (9%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           AR++F+  +++ + SWNS+++ Y          KLF  M          P+         
Sbjct: 36  ARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM----------PDRNII----- 80

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS--ALVSGFARLGNFYYARKIFEQMIQK 260
            +++ ++SG     +I    K   L+ +  V S  ALV G+   G    A  +F +M +K
Sbjct: 81  -SWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK 139

Query: 261 NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA-----VGNGLVNMYAKCGTIDDSRSVFR 315
           N VS   ++ G  +   +        L++M+          +++   K G +D++R +F 
Sbjct: 140 NKVSWTVMLIGFLQDGRIDDA---CKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFD 196

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M  +  ++W TM++G  QN   ++A   F  M       +  S  S L     +G++  
Sbjct: 197 EMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPE----KTEVSWTSML-----MGYVQN 247

Query: 376 GQQIHGEGL-KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
           G+    E L ++     V   NA++S     G +++  +VF  M E +  SW +VI    
Sbjct: 248 GRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVI-KIH 306

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANET 494
           +      EA+  ++ M++ G  P   T I+IL+  +S +    G QVHAQ+++     + 
Sbjct: 307 ERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDV 366

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
            + + L++ Y KCGE+   + IF R    +D + WNS+ISGY  + L  +A+ +   M  
Sbjct: 367 YVASVLMTMYIKCGELVKSKLIFDRFPS-KDIIMWNSIISGYASHGLGEEALKVFCEMPL 425

Query: 555 RGQ-RLDHFTFATVLSACASVATLERGMEVHAC-----GVRACLEFDVVIGSALVDMYSK 608
            G  + +  TF   LSAC+    +E G++++       GV+          + +VDM  +
Sbjct: 426 SGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAH----YACMVDMLGR 481

Query: 609 CGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKA 646
            GR + A    D M V  +   W S++     H   D A
Sbjct: 482 AGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVA 520



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 219/470 (46%), Gaps = 59/470 (12%)

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-QREG 185
           N ++A Y + L   D AR++F+E+  R++ISWN ++S Y + G+     K+F  M +R  
Sbjct: 52  NSMVAGYFANLMPRD-ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNV 110

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD--------LY----- 232
             ++     Y     +  A  S+        ++   V   G L D        LY     
Sbjct: 111 VSWTALVKGYVHNGKVDVA-ESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPD 169

Query: 233 ----VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVH--------- 279
                 ++++ G  + G    AR+IF++M +++V++   ++ G  +   V          
Sbjct: 170 KDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM 229

Query: 280 -------------GYLIRSG-------LFDMVAVG-----NGLVNMYAKCGTIDDSRSVF 314
                        GY +++G       LF+++ V      N +++   + G I  +R VF
Sbjct: 230 PEKTEVSWTSMLMGY-VQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVF 288

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             M  ++  SW T+I   ++NG   EA+  F  M++ G+  +  +LIS LS CASL  + 
Sbjct: 289 DSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLH 348

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
            G+Q+H + ++   D DV V++ L+++Y   G L +   +F   P  D + WNS+I  +A
Sbjct: 349 HGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYA 408

Query: 435 DSEALVSEAVKYYLDMRRAGWS-PNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVAN 492
            S  L  EA+K + +M  +G + PN VTF+  L+A S   M + G +++  +   + V  
Sbjct: 409 -SHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKP 467

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
            T     ++   G+ G  ++  ++   M+   D   W S++     H++L
Sbjct: 468 ITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQL 517



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 200/456 (43%), Gaps = 75/456 (16%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N L++ Y++ G++  A K+FD MP+RN VSW  +V GY H G  + A  +F +M      
Sbjct: 83  NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK--- 139

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES-TDC 142
            N+ +   +L    + G       +   C + +     D +    +I  +G C E   D 
Sbjct: 140 -NKVSWTVMLIGFLQDG------RIDDACKLYEMIPDKDNIARTSMI--HGLCKEGRVDE 190

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           AR IF+E+  R +I+W ++++ Y Q        K+F  M  +         E ++ S++ 
Sbjct: 191 AREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK--------TEVSWTSMLM 242

Query: 203 A-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
               +  +  +  L +++        +  +   +A++SG  + G    AR++F+ M ++N
Sbjct: 243 GYVQNGRIEDAEELFEVMP-------VKPVIACNAMISGLGQKGEIAKARRVFDSMKERN 295

Query: 262 VVSMNGLM---------------------EGRRK--------------------GKEVHG 280
             S   ++                     +G R                     GK+VH 
Sbjct: 296 DASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHA 355

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
            L+R      V V + L+ MY KCG +  S+ +F     KD + WN++ISG   +G  EE
Sbjct: 356 QLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEE 415

Query: 341 AIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLK--LGLDSDVSVSNA 397
           A+  FC M   G    N  + ++TLS+C+  G +  G +I+ E ++   G+    +    
Sbjct: 416 ALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY-ESMESVFGVKPITAHYAC 474

Query: 398 LLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           ++ +   AG  +  +++   M  E D   W S++GA
Sbjct: 475 MVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA 510



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 138/305 (45%), Gaps = 15/305 (4%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           V  CN +I+   + G++A A ++FD M +RN  SW  ++  +   G   EA  +F  M +
Sbjct: 265 VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK 324

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
            G       L S+L  C     +    G QVH  +++     D  V++VL+ MY  C E 
Sbjct: 325 QGVRPTFPTLISILSVCASL--ASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGEL 382

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
              ++ IF+   ++D+I WNSIIS Y+  G      K+F  M   G   S KPNE TF +
Sbjct: 383 VK-SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSG---STKPNEVTFVA 438

Query: 200 LITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
            ++A +Y+ ++     + + +  V     ++  Y  + +V    R G F  A ++ + M 
Sbjct: 439 TLSACSYAGMVEEGLKIYESMESVFGVKPITAHY--ACMVDMLGRAGRFNEAMEMIDSMT 496

Query: 259 QKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRS 312
            +   ++ G + G  R   +          L ++    +G    L NMYA  G   D   
Sbjct: 497 VEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAE 556

Query: 313 VFRFM 317
           + + M
Sbjct: 557 LRKLM 561



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 108/252 (42%), Gaps = 48/252 (19%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           V    T++  Y +   +  A K+FD MP++  VSW  ++ GY   G   +A ++F+ M  
Sbjct: 203 VITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM-- 260

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
                                P            V+  N    GL     IA        
Sbjct: 261 ------------------PVKP------------VIACNAMISGLGQKGEIAK------- 283

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
              ARR+F+ ++ R+  SW ++I ++ + G  +    LF  MQ++G R    P   T  S
Sbjct: 284 ---ARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR----PTFPTLIS 336

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           +++   S  L+  +  +Q+ A + +     D+YV S L++ + + G    ++ IF++   
Sbjct: 337 ILSVCAS--LASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS 394

Query: 260 KNVVSMNGLMEG 271
           K+++  N ++ G
Sbjct: 395 KDIIMWNSIISG 406



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 1/97 (1%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q+++  F  DV++ + L+ +Y++ G+L  +  +FD  P ++ + W  I+SGY   
Sbjct: 351 KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASH 410

Query: 65  GMSNEACKMFKEMVRAGFL-LNRYALGSVLRACQECG 100
           G+  EA K+F EM  +G    N     + L AC   G
Sbjct: 411 GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG 447


>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 248/698 (35%), Positives = 410/698 (58%), Gaps = 31/698 (4%)

Query: 253 IFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
           I ++ I K +VS           +++H +++++G      +   LVN+YAKCGT++ +R 
Sbjct: 75  ILQECIDKKLVS---------DAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARK 125

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           VF  +  ++ VSW T+++G   +   E A+  F  M   G   +N++L + LS+ + L  
Sbjct: 126 VFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHS 185

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
             LG+QIHG  +K  ++ D S+ N+L SLY+  G L   +K F  + + + +SW +VI A
Sbjct: 186 KELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISA 245

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN 492
           + D+    +  ++++++M      PN  T  + L+         +G Q+H+  IK    +
Sbjct: 246 WGDN-GEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFES 304

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH-----------NEL 541
              I+N+++  Y KCG + + +K+F  M E    V+WN+MI+G+             ++ 
Sbjct: 305 NLPIKNSIMYLYLKCGWIHEAKKLFDEM-ETISLVTWNAMIAGHARMMDFAKDDLAAHQC 363

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +A+++   + + G + D FTF++VLS C+S+  LE+G +VHA  ++     DVV+G+A
Sbjct: 364 GTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTA 423

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           LV+MY+KCG I+ AS+ F  M +R + SW SMI+GYA++G   +AL LF  M+L G  P+
Sbjct: 424 LVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPN 483

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            +TFVGVLSACSHAG+VDE   +F+ M   Y + P ++ ++C++D+  R G LD+  +FI
Sbjct: 484 KITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFI 543

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
            +M + PN  IW ++L A CR+   K ELG  AA  L  ++P++   Y LL NMY S GK
Sbjct: 544 KEMDLEPNEFIW-SILIAGCRSQ-GKLELGFYAAEQLLNLKPKDTETYNLLLNMYLSAGK 601

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           W++V++ RK MKE ++ +    SW+++KD ++ F     SH +   +YE L  L++K + 
Sbjct: 602 WKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQSGEMYELLGNLHEKAKS 661

Query: 842 AGY-----VPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCG 895
            GY     +  T       E ++   +V YHSEK+A+AF +L  ++ +PIR+ K++ +C 
Sbjct: 662 FGYEWEESLEVTDEEEDADEEKALTSIV-YHSEKLAIAFGLLNTSNAVPIRVTKSISMCR 720

Query: 896 DCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
           DCH+  + IS +  REI++RDS R H F +G CSCGD+
Sbjct: 721 DCHNFIRIISLLSAREIIIRDSKRLHKFINGHCSCGDF 758



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 203/423 (47%), Gaps = 61/423 (14%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           DA+  H  I+K G   D FL   L+NVY + G + +A K+FDE+P RN VSW  +++GY 
Sbjct: 87  DAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYV 146

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
           H      A ++F+EM+ AG     Y LG+ L A  +      + G Q+H   +K    FD
Sbjct: 147 HDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSK--ELGKQIHGYSIKYRIEFD 204

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             + N L ++Y  C  S +CA + F  I  +++ISW ++IS +   G+  +  + F  M 
Sbjct: 205 ASIGNSLCSLYSKC-GSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEML 263

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            E     ++PNE+T  S ++     V+    +  QI ++  K G  S+L + ++++  + 
Sbjct: 264 SE----CVEPNEFTLTSALSLC--CVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYL 317

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------------ 272
           + G  + A+K+F++M   ++V+ N ++ G                               
Sbjct: 318 KCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRS 377

Query: 273 ----------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDS 310
                                  +G++VH   I++G    V VG  LVNMY KCG+I+ +
Sbjct: 378 GMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERA 437

Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
              F  M  +  +SW +MI+G  QNG  ++A++ F  MR  G+  +  + +  LS+C+  
Sbjct: 438 SKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHA 497

Query: 371 GWI 373
           G +
Sbjct: 498 GMV 500



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 209/421 (49%), Gaps = 24/421 (5%)

Query: 322 SVSW--NTMISGLDQNGC--YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
           SVS+  +T + G+ +  C  + EA+    +  R+G    +   +  L  C     +   Q
Sbjct: 34  SVSYQRSTQLDGVSEARCLDFREAL----SFIREGTKVESAFYVPILQECIDKKLVSDAQ 89

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA-DS 436
           +IH   +K G   D  +   L+++YA  G +    KVF  +P  + VSW +++  +  DS
Sbjct: 90  KIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDS 149

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
           +  +  AV+ + +M  AG  P   T    L+A+S     +LG Q+H   IKY +  + +I
Sbjct: 150 KPEL--AVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASI 207

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
            N+L S Y KCG ++   K F R+ + ++ +SW ++IS +  N      +     M+   
Sbjct: 208 GNSLCSLYSKCGSLECAVKAFRRIRD-KNVISWTTVISAWGDNGEAATGLQFFVEMLSEC 266

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
              + FT  + LS C  + +L+ G ++H+  ++   E ++ I ++++ +Y KCG I  A 
Sbjct: 267 VEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAK 326

Query: 617 RFFDLMPVRNVYSWNSMISGYAR-----------HGHGDKALTLFSQMKLDGPLPDHVTF 665
           + FD M   ++ +WN+MI+G+AR           H  G +AL++F ++   G  PD  TF
Sbjct: 327 KLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTF 386

Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
             VLS CS    +++G +   + +   G +  +   + +V++  + G +++  +   +M 
Sbjct: 387 SSVLSVCSSLVALEQG-EQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMS 445

Query: 726 I 726
           I
Sbjct: 446 I 446


>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/574 (39%), Positives = 352/574 (61%), Gaps = 6/574 (1%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S +++CA    +   + IH    +  L  D  + N+L+ +Y   G +S    VF  MP  
Sbjct: 65  SIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSR 124

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D VSW  +I  +A +  + +EA+    DM RA + PNG TF ++L A  +     +G Q+
Sbjct: 125 DVVSWTYLIAGYAQNY-MPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQM 183

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           HA  +KYN   +  + +ALL  Y +C +MD    +F R+  + +EVSWN++I+G+     
Sbjct: 184 HALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSK-NEVSWNALIAGFARKAD 242

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
               +     M + G    HFT++++ SA A +  LE+G  VHA  +++  +    +G+ 
Sbjct: 243 GETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNT 302

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           ++ MY+K G +  A + FD M  R++ +WN+M++  A++G G +A+  F +++  G   +
Sbjct: 303 MLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLN 362

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            +TF+ VL+ACSH GLV EG KH+  M + Y + P+++ +   VDLLGRAG L +   F+
Sbjct: 363 QITFLSVLTACSHGGLVKEG-KHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFV 421

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
            KMP+ P + +W  +LGAC R + +  ++G+ AA+ +FE++P +    VLL N+YAS GK
Sbjct: 422 FKMPMEPTAAVWGALLGAC-RMH-KNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGK 479

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           W D A+ RK MK   VKKE  CSWV +++ VH+FVA D++HP+   IY   +E+N +++ 
Sbjct: 480 WNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKK 539

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR-NSKLPIRIMKNLRVCGDCHSA 900
           AGYVP T   L  +  + +E  + YHSEKIA+AF L    +   IRIMKN+R+CGDCHSA
Sbjct: 540 AGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSA 599

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           FK++SK+  REIV+RD+NRFHHF++G CSCGDYW
Sbjct: 600 FKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 179/367 (48%), Gaps = 3/367 (0%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            + +H +L RS L     + N L++MY KCG + D+R VF  M  +D VSW  +I+G  Q
Sbjct: 79  ARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQ 138

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N    EAI     M R     + F+  S L +  + G   +G+Q+H   +K   D DV V
Sbjct: 139 NYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYV 198

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            +ALL +YA    +   + VF  +   ++VSWN++I  FA      +  +K + +M+R G
Sbjct: 199 GSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMK-FAEMQRNG 257

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
           +     T+ ++ +A +     + G  VHA +IK        + N +L  Y K G M D  
Sbjct: 258 FGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDAR 317

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           K+F RM ++RD V+WN+M++      L  +A+     + + G +L+  TF +VL+AC+  
Sbjct: 318 KVFDRM-DKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHG 376

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSM 633
             ++ G           ++ ++    + VD+  + G +  A  F   MP+    + W ++
Sbjct: 377 GLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGAL 436

Query: 634 ISGYARH 640
           +     H
Sbjct: 437 LGACRMH 443



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/432 (23%), Positives = 200/432 (46%), Gaps = 74/432 (17%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H  + +   A D FL N+LI++Y + G ++ A  +FD+MP R+ VSW  +++GY  
Sbjct: 79  ARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQ 138

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
             M  EA  +  +M+RA F  N +   S+L+A   CG  G   G Q+H L +K N   D 
Sbjct: 139 NYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACG--GCSIGEQMHALAVKYNWDEDV 196

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V + L+ MY  C E  D A  +F+ + +++ +SWN++I+ ++++ D  +    F+ MQR
Sbjct: 197 YVGSALLDMYARC-EQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQR 255

Query: 184 EGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            GF        +T+ S+ +  A   ++  G ++   ++    K+G     +VG+ ++  +
Sbjct: 256 NGF----GATHFTYSSMFSAFARIGALEQGRWVHAHLI----KSGQKLTAFVGNTMLGMY 307

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
           A+ G+   ARK+F++M ++++V+ N ++                                
Sbjct: 308 AKSGSMVDARKVFDRMDKRDLVTWNTMLT------------------------------- 336

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
                     ++ ++ +GK++V+                   +F  +R+ G+  +  + +
Sbjct: 337 ----------ALAQYGLGKEAVA-------------------HFEEIRKCGIQLNQITFL 367

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-E 420
           S L++C+  G +  G+          +  ++    + + L   AG L   L   F MP E
Sbjct: 368 SVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPME 427

Query: 421 HDQVSWNSVIGA 432
                W +++GA
Sbjct: 428 PTAAVWGALLGA 439



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 180/363 (49%), Gaps = 23/363 (6%)

Query: 448 LDMRRAG-WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
           LD+  AG  +P    + +I+AA + F        +HA + +  +A +  + N+L+  Y K
Sbjct: 48  LDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCK 107

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
           CG + D   +F +M   RD VSW  +I+GY  N +  +A+ L+  M++   R + FTF +
Sbjct: 108 CGAVSDARHVFDKMPS-RDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTS 166

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           +L A  +      G ++HA  V+   + DV +GSAL+DMY++C ++D A   FD +  +N
Sbjct: 167 LLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKN 226

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG---FK 683
             SWN++I+G+AR   G+  L  F++M+ +G    H T+  + SA +  G +++G     
Sbjct: 227 EVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHA 286

Query: 684 HFKSMSQVYGLIPQLEQF--SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACC 741
           H     Q      +L  F  + M+ +  ++G +    +  ++M    + + W T+L A  
Sbjct: 287 HLIKSGQ------KLTAFVGNTMLGMYAKSGSMVDARKVFDRMD-KRDLVTWNTMLTALA 339

Query: 742 RANCRKTELGRKAANMLFEMEP----QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEV 797
           +       LG++A     E+       N + ++ +    + GG  ++       MK+  V
Sbjct: 340 QYG-----LGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNV 394

Query: 798 KKE 800
           + E
Sbjct: 395 QPE 397



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 178/386 (46%), Gaps = 46/386 (11%)

Query: 190 LKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
           L P    + S+I A A    L+G+   + I A + ++ L  D ++ ++L+  + + G   
Sbjct: 56  LAPTPRLYHSIIAACAQFKNLAGA---RAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVS 112

Query: 249 YARKIFEQMIQKNVVSMNGLMEGRRK---------------------------------- 274
            AR +F++M  ++VVS   L+ G  +                                  
Sbjct: 113 DARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATG 172

Query: 275 -------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
                  G+++H   ++    + V VG+ L++MYA+C  +D +  VF  ++ K+ VSWN 
Sbjct: 173 ACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNA 232

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           +I+G  +    E  +M F  M+R+G  +++F+  S  S+ A +G +  G+ +H   +K G
Sbjct: 233 LIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSG 292

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
                 V N +L +YA +G +    KVF  M + D V+WN+++ A A    L  EAV ++
Sbjct: 293 QKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQY-GLGKEAVAHF 351

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
            ++R+ G   N +TF+++L A S   + K G      +  YNV  E     + +   G+ 
Sbjct: 352 EEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRA 411

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMI 533
           G + +      +M        W +++
Sbjct: 412 GLLKEALIFVFKMPMEPTAAVWGALL 437


>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/589 (41%), Positives = 349/589 (59%), Gaps = 6/589 (1%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           MR  G   + F+  S LS+ A+   ++ GQQ+H    K G D+++ V  AL+ +YA    
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD-MRRAGWSPNGVTFINIL 466
           +   ++VF  MPE + VSWNS+I  F  +  L   AV  + D +R     PN V+  ++L
Sbjct: 61  MHSAVRVFDQMPERNLVSWNSMIVGFFHNN-LYDRAVGVFKDVLREKTVIPNEVSVSSVL 119

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           +A ++      G QVH  V+K+ +   T + N+L+  Y KC   D+  K+F  + +R D 
Sbjct: 120 SACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDR-DV 178

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           V+WN ++ G++ N+   +A N  W M + G   D  +F+TVL + AS+A L +G  +H  
Sbjct: 179 VTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQ 238

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            ++     ++ I  +L+ MY+KCG +  A + F+ +   NV SW +MIS Y  HG  ++ 
Sbjct: 239 IIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQV 298

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           + LF  M  +G  P HVTFV VLSACSH G V+EG  HF SM +++ + P  E ++CMVD
Sbjct: 299 IELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVD 358

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           LLGRAG LD+ + FI  MP+ P   +W  +LGAC +    K  +GR+AA  LFEMEP N 
Sbjct: 359 LLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLK--MGREAAERLFEMEPYNP 416

Query: 767 VNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKD 826
            NYVLLANM    G+ E+  + R+ M    V+KE GCSW+ +K+   VF A D SH   D
Sbjct: 417 GNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSD 476

Query: 827 LIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPI 885
            IY+ L++L + ++  GYV +T+F    LE   +E  + YHSEK+A+AF +LT     PI
Sbjct: 477 EIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPI 536

Query: 886 RIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           RI KNLR CG CH+  K  SKI  REI++RD NRFH F DG CSCGDYW
Sbjct: 537 RIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 193/387 (49%), Gaps = 50/387 (12%)

Query: 192 PNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
           PN++TF S+++A+ ++  VL G    QQ+ +++ K G  ++++VG+ALV  +A+  + + 
Sbjct: 8   PNQFTFSSILSASAATMMVLHG----QQLHSLIHKHGFDANIFVGTALVDMYAKCADMHS 63

Query: 250 ARKIFEQMIQKNVVSMNGLMEG------------------RRK----------------- 274
           A ++F+QM ++N+VS N ++ G                  R K                 
Sbjct: 64  AVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACA 123

Query: 275 -------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
                  G++VHG +++ GL  +  V N L++MY KC   D+   +F+ +  +D V+WN 
Sbjct: 124 NMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNV 183

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           ++ G  QN  +EEA   F  MRR+G++    S  + L S ASL  +  G  IH + +KLG
Sbjct: 184 LVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLG 243

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
              ++ +  +L+++YA  G L    +VF  + +H+ +SW ++I A+       ++ ++ +
Sbjct: 244 YVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAY-QLHGCANQVIELF 302

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA-LLSCYGK 506
             M   G  P+ VTF+ +L+A S     + G      + K +  N      A ++   G+
Sbjct: 303 EHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGR 362

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMI 533
            G +D+ ++    M  +     W +++
Sbjct: 363 AGWLDEAKRFIESMPMKPTPSVWGALL 389



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 147/266 (55%), Gaps = 14/266 (5%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  I KHGF  ++F+   L+++Y +  D+ SA ++FD+MP+RN VSW  ++ G+ H  +
Sbjct: 32  LHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNL 91

Query: 67  SNEACKMFKEMVRAGFLL-NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
            + A  +FK+++R   ++ N  ++ SVL AC   G  G  FG QVH +V+K        V
Sbjct: 92  YDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMG--GLNFGRQVHGVVVKFGLVPLTYV 149

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
            N L+ MY  C    D   ++F+ +  RD+++WN ++  + Q          F  M+REG
Sbjct: 150 MNSLMDMYFKC-RFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREG 208

Query: 186 FRYSLKPNEYTFGSLI--TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
               + P+E +F +++  +A+ +++  G+ +  QI+    K G + ++ +  +L++ +A+
Sbjct: 209 ----ILPDEASFSTVLHSSASLAALHQGTAIHDQII----KLGYVKNMCILGSLITMYAK 260

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLM 269
            G+   A ++FE +   NV+S   ++
Sbjct: 261 CGSLVDAYQVFEGIEDHNVISWTAMI 286



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 172/397 (43%), Gaps = 53/397 (13%)

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
           +G   N++   S+L A           G Q+H L+ K     +  V   L+ MY  C + 
Sbjct: 4   SGPYPNQFTFSSILSA--SAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD- 60

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
              A R+F+++  R+L+SWNS+I  +           +F  + RE    ++ PNE +  S
Sbjct: 61  MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREK---TVIPNEVSVSS 117

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           +++A  +  + G    +Q+  +V K GL+   YV ++L+  + +   F    K+F+ +  
Sbjct: 118 VLSACAN--MGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGD 175

Query: 260 KNVVSMNGLMEG-----------------RR------------------------KGKEV 278
           ++VV+ N L+ G                 RR                        +G  +
Sbjct: 176 RDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAI 235

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H  +I+ G    + +   L+ MYAKCG++ D+  VF  +   + +SW  MIS    +GC 
Sbjct: 236 HDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCA 295

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN-- 396
            + I  F  M  +G+  S+ + +  LS+C+  G +  G   H   +K   D +    +  
Sbjct: 296 NQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLA-HFNSMKKIHDMNPGPEHYA 354

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
            ++ L   AG+L    +    MP     S W +++GA
Sbjct: 355 CMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGA 391



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 141/320 (44%), Gaps = 22/320 (6%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K G     ++ N+L+++Y +        KLF  + DR+ V+W  +V G+      
Sbjct: 135 HGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKF 194

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EAC  F  M R G L +  +  +VL +      +    G  +H  ++K     +  +  
Sbjct: 195 EEACNYFWVMRREGILPDEASFSTVLHSSASL--AALHQGTAIHDQIIKLGYVKNMCILG 252

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI MY  C    D A ++FE IE  ++ISW ++IS Y   G    V +LF  M  EG  
Sbjct: 253 SLITMYAKCGSLVD-AYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEG-- 309

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVG----SALVSGFAR 243
             ++P+  TF  +++A      S +  +++ LA       + D+  G    + +V    R
Sbjct: 310 --IEPSHVTFVCVLSAC-----SHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGR 362

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----L 297
            G    A++  E M  K   S+ G + G  R+ G    G      LF+M     G    L
Sbjct: 363 AGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLL 422

Query: 298 VNMYAKCGTIDDSRSVFRFM 317
            NM  + G ++++  V R M
Sbjct: 423 ANMCTRSGRLEEANEVRRLM 442


>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 250/694 (36%), Positives = 380/694 (54%), Gaps = 47/694 (6%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           K +H   +R  +     +  GL N +           VF     +   +W ++ISG  + 
Sbjct: 53  KAIHRQSVRGCVPSSSVIARGLHNAH----------RVFDGTPTRSLPAWTSIISGCARE 102

Query: 336 GCYEEAIMNFCAMRRD-GLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           G + + +  F  M  + G  + N F L   L  CA LG +  G++IHG  L+ G+  DV 
Sbjct: 103 GRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESGRRIHGWILRSGVCPDVV 162

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV------------- 440
           + NA+L +YA  G   R  + F  M + D  SWN VI A      LV             
Sbjct: 163 LCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVGATQLFDESSLRD 222

Query: 441 -----------------SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
                            +EA+     M RAG + +  T+  + A A   S   LG Q+H 
Sbjct: 223 VSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHG 282

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD--EVSWNSMISGYIHNEL 541
           +V+   +  +  +  +L+  Y KCGEM+    IF R S+  +  + +W++M++GY+ N  
Sbjct: 283 RVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGR 342

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +A+     M++ G     F   +V SACA+   +E+G +VH    +    FD  + SA
Sbjct: 343 EEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASA 402

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           +VDMYSK G ++ A R F     +NV  W +M+  YA HG G  AL +FS+MK +  +P+
Sbjct: 403 IVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPN 462

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            +T V VLSACSH+GLV +G+ +F  M + YG++P  E ++CMVDL GRAG LDK + FI
Sbjct: 463 EITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFI 522

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
            +  I+  +++W+T+L A CR + +  E  + A+  L ++E  +A +YVL++NMYA+  K
Sbjct: 523 EENKISHEAVVWKTLLSA-CRLH-KHIEYAQLASEKLVQLEQYDAGSYVLMSNMYATNNK 580

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           W D  K R +MKE  V+K+ G SW+ +K+ VH FVA D SHP    IY  L++L +++++
Sbjct: 581 WLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHPRSAEIYAYLEKLMERLKE 640

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSA 900
            GY  +T   + D+E E +E  + +HSEK+A+AF +++      +RI KNLRVC DCH A
Sbjct: 641 MGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGIISTPVGTALRIFKNLRVCEDCHEA 700

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            KFI++   REIV+RD  RFHHF DG+CSC D+W
Sbjct: 701 IKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 36  LASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR--AGFLLNRYALGSVL 93
           L +A ++FD  P R+  +W  I+SG   +G   +  + F EM+        N + L  VL
Sbjct: 74  LHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVL 133

Query: 94  RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
           R C   G    + G ++H  +L+S    D ++ N ++ MY  C +    ARR F  +  +
Sbjct: 134 RCC--AGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGR-ARRAFGAMAQK 190

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY 213
           D  SWN +I    Q GD +   +LF          SL+           +++++++SG  
Sbjct: 191 DATSWNIVIRACLQDGDLVGATQLFDE-------SSLRD---------VSSWNTIVSG-- 232

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR 273
                        L+   +   AL     RL     A   F       V ++ GL+  R 
Sbjct: 233 -------------LMRHGHTTEAL----GRLQQMVRAGVTFSNYTYSMVFALAGLLSSRD 275

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF-RF--MIGKDSVSWNTMIS 330
            G+++HG ++ + L +   VG  L++MY KCG ++ + S+F R+         +W+TM++
Sbjct: 276 LGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVA 335

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           G  QNG  EEA+  F  M R+G+ +  F L S  S+CA+ G +  G+Q+HG   KLG   
Sbjct: 336 GYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRF 395

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           D  +++A++ +Y+ +G L    ++F      +   W +++ ++A S      A++ +  M
Sbjct: 396 DAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYA-SHGQGRMALEIFSRM 454

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           +     PN +T + +L+A S   +   G H  +    +Y +   T   N ++  YG+ G 
Sbjct: 455 KAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGL 514

Query: 510 MDDCEKIFARMSERRDEVSWNSMISG 535
           +D  +          + V W +++S 
Sbjct: 515 LDKAKNFIEENKISHEAVVWKTLLSA 540



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 127/305 (41%), Gaps = 63/305 (20%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGD-------------------------- 35
           +  +  H  IL+ G   DV LCN ++++Y + GD                          
Sbjct: 143 ESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRAC 202

Query: 36  -----LASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRY--- 87
                L  A++LFDE   R+  SW  IVSG    G + EA    ++MVRAG   + Y   
Sbjct: 203 LQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYS 262

Query: 88  ---ALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCAR 144
              AL  +L        S    G Q+H  V+ +    D  V   L+ MY  C E  + A 
Sbjct: 263 MVFALAGLL--------SSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGE-MESAL 313

Query: 145 RIFEE----IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
            IF+      E R   +W+++++ Y Q G      + F RM REG            G  
Sbjct: 314 SIFDRWSDFTEDRQF-AWSTMVAGYVQNGREEEALEFFRRMLREGV---------PAGQF 363

Query: 201 ITAAYSSVLSGSYLLQ---QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
           I  + +S  + + +++   Q+   V+K G   D  + SA+V  +++ G+   A +IF   
Sbjct: 364 ILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSA 423

Query: 258 IQKNV 262
             KNV
Sbjct: 424 QTKNV 428


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/630 (38%), Positives = 370/630 (58%), Gaps = 14/630 (2%)

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
           R++   D  SWN++I+ L ++G   EA++ F +MR+  L  +  S    + +C+SL  I 
Sbjct: 34  RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
            G+Q H +    G  SD+ VS+AL+ +Y+  G L    KVF  +P+ + VSW S+I  + 
Sbjct: 94  SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGY- 152

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTF------INILAAASSFSMGKLGHQVHAQVIKY 488
           D      +AV  + D+       +   F      +++++A S      L   +H+ VIK 
Sbjct: 153 DLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKR 212

Query: 489 NVANETTIENALLSCYGKCGE--MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAM 546
                 ++ N LL  Y K GE  +    KIF ++ ++ D VS+NS++S Y  + +  +A 
Sbjct: 213 GFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK-DRVSYNSIMSVYAQSGMSNEAF 271

Query: 547 NLVWFMMQ-RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
            +   +++ +    +  T +TVL A +    L  G  +H   +R  LE DV++G++++DM
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
           Y KCGR++ A + FD M  +NV SW +MI+GY  HGH  KAL LF  M   G  P+++TF
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITF 391

Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
           V VL+ACSHAGL  EG++ F +M   +G+ P LE + CMVDLLGRAG L K  + I +M 
Sbjct: 392 VSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK 451

Query: 726 ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDV 785
           + P+S+IW ++L A CR + +  EL   +   LFE++  N   Y+LL+++YA  G+W+DV
Sbjct: 452 MKPDSIIWSSLLAA-CRIH-KNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDV 509

Query: 786 AKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
            + R  MK   + K  G S + +   VHVF+ GDE HP+++ IYE L ELN+K+ +AGYV
Sbjct: 510 ERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYV 569

Query: 846 PQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFI 904
             T     D++ E KE  +  HSEK+A+AF ++       + ++KNLRVC DCH+  K I
Sbjct: 570 SNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLI 629

Query: 905 SKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           SKIV RE V+RD+ RFHHF DG CSCGDYW
Sbjct: 630 SKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 194/407 (47%), Gaps = 44/407 (10%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK+ H      G    + V + L+ MY+ CG ++D+R VF  +  ++ VSW +MI G D 
Sbjct: 95  GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154

Query: 335 NGCYEEAIMNFCAM------RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           NG   +A+  F  +        D +   +  L+S +S+C+ +    L + IH   +K G 
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214

Query: 389 DSDVSVSNALLSLYADAGY--LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
           D  VSV N LL  YA  G   ++   K+F  + + D+VS+NS++  +A S  + +EA + 
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS-GMSNEAFEV 273

Query: 447 YLDM-RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
           +  + +    + N +T   +L A S     ++G  +H QVI+  + ++  +  +++  Y 
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           KCG ++   K F RM + ++  SW +MI+GY  +    KA+ L   M+  G R ++ TF 
Sbjct: 334 KCGRVETARKAFDRM-KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFV 392

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           +VL+AC+          +H  G R    F+ + G                   F + P  
Sbjct: 393 SVLAACSHAG-------LHVEGWRW---FNAMKGR------------------FGVEP-- 422

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
            +  +  M+    R G   KA  L  +MK+    PD + +  +L+AC
Sbjct: 423 GLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK---PDSIIWSSLLAAC 466



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 193/444 (43%), Gaps = 58/444 (13%)

Query: 40  SKLFDEMPDRNSV-SWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQE 98
           + LF+   D+  V SW  +++     G S EA   F  M +      R +    ++AC  
Sbjct: 29  TTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACS- 87

Query: 99  CGPSGFKF--GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLI 156
              S F    G Q H          D  VS+ LI MY +C +  D AR++F+EI  R+++
Sbjct: 88  ---SLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLED-ARKVFDEIPKRNIV 143

Query: 157 SWNSIISVYSQRGDTISVFKLFSRM--QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL 214
           SW S+I  Y   G+ +    LF  +         ++  +     S+I+A   S +    L
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISAC--SRVPAKGL 201

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFAR--LGNFYYARKIFEQMIQKNVVSMNGLME-- 270
            + I + V K G    + VG+ L+  +A+   G    ARKIF+Q++ K+ VS N +M   
Sbjct: 202 TESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVY 261

Query: 271 ----------------------------------------GRRKGKEVHGYLIRSGLFDM 290
                                                     R GK +H  +IR GL D 
Sbjct: 262 AQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDD 321

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           V VG  +++MY KCG ++ +R  F  M  K+  SW  MI+G   +G   +A+  F AM  
Sbjct: 322 VIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID 381

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
            G+  +  + +S L++C+  G  + G +  +    + G++  +     ++ L   AG+L 
Sbjct: 382 SGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ 441

Query: 410 RCLKVFFLMP-EHDQVSWNSVIGA 432
           +   +   M  + D + W+S++ A
Sbjct: 442 KAYDLIQRMKMKPDSIIWSSLLAA 465



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 141/278 (50%), Gaps = 22/278 (7%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q    G+  D+F+ + LI +Y   G L  A K+FDE+P RN VSW  ++ GY   
Sbjct: 96  KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155

Query: 65  GMSNEACKMFKEMV------RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
           G + +A  +FK+++           L+   L SV+ AC      G      +H  V+K  
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT--ESIHSFVIK-- 211

Query: 119 QTFDGLVS--NVLIAMYGSCLE-STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVF 175
           + FD  VS  N L+  Y    E     AR+IF++I  +D +S+NSI+SVY+Q G +   F
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271

Query: 176 KLFSRMQREGFRYSLKPNEYTFGS-LITAAYSSVLS-GSYLLQQILAMVKKAGLLSDLYV 233
           ++F R+ +      +  N  T  + L+  ++S  L  G  +  Q++ M    GL  D+ V
Sbjct: 272 EVFRRLVKNKV---VTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM----GLEDDVIV 324

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           G++++  + + G    ARK F++M  KNV S   ++ G
Sbjct: 325 GTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAG 362



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 157/382 (41%), Gaps = 61/382 (15%)

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
           E  +   +F R  ++ D  SWNS+I+    +    +A+     M +        +F   +
Sbjct: 24  ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAI 83

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
            AC+S+  +  G + H        + D+ + SAL+ MYS CG+++ A + FD +P RN+ 
Sbjct: 84  KACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF------VGVLSACS--------- 673
           SW SMI GY  +G+   A++LF  + +D    D   F      V V+SACS         
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203

Query: 674 --HAGLVDEGFKHFKSMSQVY----------GLIPQLEQFSCMVD-----------LLGR 710
             H+ ++  GF    S+              G+    + F  +VD           +  +
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263

Query: 711 AGELDKIEEFINKM----PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           +G  ++  E   ++     +T N++   TVL A   +   +  +G+   + +  M  ++ 
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALR--IGKCIHDQVIRMGLEDD 321

Query: 767 VNY-VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
           V     + +MY   G+ E   KA   MK   V+     SW  M  G      G   H  K
Sbjct: 322 VIVGTSIIDMYCKCGRVETARKAFDRMKNKNVR-----SWTAMIAGY-----GMHGHAAK 371

Query: 826 DLIYEKLKELNQKMRDAGYVPQ 847
            L      EL   M D+G  P 
Sbjct: 372 AL------ELFPAMIDSGVRPN 387



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 53/96 (55%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q+++ G   DV +  ++I++Y + G + +A K FD M ++N  SW  +++GY   
Sbjct: 307 KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMH 366

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G + +A ++F  M+ +G   N     SVL AC   G
Sbjct: 367 GHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAG 402


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 252/756 (33%), Positives = 408/756 (53%), Gaps = 53/756 (7%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A+++F+ +  RD++SWNS+IS Y   GD   V  +F +M R G  +    +  TF  ++ 
Sbjct: 127 AQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVF----DRTTFAVVLK 182

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
           +  S    G  +  QI  +  K G   D+  GSAL+  +A+      + + F  M +KN 
Sbjct: 183 SCSSLEDHGGGI--QIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNW 240

Query: 263 VSMNGLMEG-----------------------------------------RRKGKEVHGY 281
           VS + ++ G                                          R G ++HG+
Sbjct: 241 VSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGH 300

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
            +++     V +G   ++MY KC  + D++ +F  +   +  S+N +I G  ++    EA
Sbjct: 301 ALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEA 360

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +  F  +++ GL     SL     +CA +   + G Q+HG  +K    S++ V+NA+L +
Sbjct: 361 LGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDM 420

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y   G L     VF  M   D VSWN++I A  +      + +  ++ M ++G  P+  T
Sbjct: 421 YGKCGALVEACLVFEEMVSRDAVSWNAIIAAH-EQNGNEEKTLSLFVWMLQSGMEPDEFT 479

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           + ++L A + +     G ++H ++IK  +  ++ +  AL+  Y KCG M+  EK+  R++
Sbjct: 480 YGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLA 539

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
           E+   VSWN++ISG+   +   +A      M++ G   D+FT+AT+L  CA++ T+E G 
Sbjct: 540 EQT-VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGK 598

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           ++HA  ++  L+ D  I S LVDMYSKCG +      F+  P R+  +WN+M+ GYA+HG
Sbjct: 599 QIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHG 658

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
            G++AL +F  M+L+   P+H TF+ VL AC H GLV++G  +F SM   YGL PQLE +
Sbjct: 659 LGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHY 718

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFE 760
           SC+VD++GR+G++ K  E I  MP   +++IWRT+L  C    N    E+  KAA  + +
Sbjct: 719 SCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGN---VEVAEKAAYSILQ 775

Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           +EP+++  YVLL+N+YA+ G W +V K RK M+   +KKE GCSW+ +K  VH F+ GD+
Sbjct: 776 LEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDK 835

Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLE 856
           +HP    IYE L  L  +M+  GY+P T F L D E
Sbjct: 836 AHPRSKEIYENLDVLTDEMKWVGYMPDTDFILNDDE 871



 Score =  286 bits (732), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 203/718 (28%), Positives = 346/718 (48%), Gaps = 65/718 (9%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D    N ++  Y   GD+  A KLFD MP+R+ VSW  ++SGY H G   +   +F +M 
Sbjct: 107 DTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMG 166

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           R G + +R     VL++C      G   G+Q+H L +K     D +  + L+ MY  C +
Sbjct: 167 RMGTVFDRTTFAVVLKSCSSLEDHG--GGIQIHGLAVKMGFDCDVVTGSALLDMYAKC-K 223

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             DC+ + F  +  ++ +SW++II+   Q  D     +LF  MQ+ G   S    + TF 
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVS----QSTFA 279

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           S+  +     LS   L  Q+     K    +D+ +G+A +  + +  N   A+K+F  + 
Sbjct: 280 SVFRSCAG--LSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLP 337

Query: 259 QKNVVSMNGL-----------------------------------------MEGRRKGKE 277
             N+ S N +                                         ++G  +G +
Sbjct: 338 NHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQ 397

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VHG  ++S     + V N +++MY KCG + ++  VF  M+ +D+VSWN +I+  +QNG 
Sbjct: 398 VHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGN 457

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML--GQQIHGEGLK--LGLDSDVS 393
            E+ +  F  M + G+    F+  S L +CA  GW  L  G +IH   +K  LGLDS V 
Sbjct: 458 EEKTLSLFVWMLQSGMEPDEFTYGSVLKACA--GWQALNCGMEIHNRIIKSRLGLDSFVG 515

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           +  AL+ +Y+  G + +  K+   + E   VSWN++I  F+  +    EA K +  M   
Sbjct: 516 I--ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFS-LQKQSEEAQKTFSKMLEM 572

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G  P+  T+  IL   ++    +LG Q+HAQ+IK  + ++  I + L+  Y KCG M D 
Sbjct: 573 GVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDF 632

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
           + IF + +  RD V+WN+M+ GY  + L  +A+ +  +M     + +H TF  VL AC  
Sbjct: 633 QLIFEK-APNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGH 691

Query: 574 VATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWN 631
           +  +E+G+   H+      L+  +   S +VD+  + G++  A    + MP   +   W 
Sbjct: 692 MGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWR 751

Query: 632 SMISGYARHGHGDKA-LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           +++S    HG+ + A    +S ++L+    D   +V + +  ++AG+ +E  K  K M
Sbjct: 752 TLLSICKIHGNVEVAEKAAYSILQLEP--EDSAAYVLLSNIYANAGMWNEVTKLRKMM 807



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 182/636 (28%), Positives = 301/636 (47%), Gaps = 55/636 (8%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G Q H  ++ +       V+N LI MY  C    + A ++F+ +  RD +SWN+++  Y+
Sbjct: 61  GKQAHARMILTEFKPTVFVTNCLIQMYIKC-SDLEFAFKVFDGMPQRDTVSWNAMLFGYA 119

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
            RGD     KLF  M     R  +  N    G L    +  V+                 
Sbjct: 120 GRGDIGVAQKLFDAMPE---RDVVSWNSLISGYLHNGDHRKVI----------------- 159

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSG 286
              D+++         R+G       +F++     V+     +E    G ++HG  ++ G
Sbjct: 160 ---DVFLQ------MGRMGT------VFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMG 204

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
               V  G+ L++MYAKC  +D S   F  M  K+ VSW+ +I+G  QN      +  F 
Sbjct: 205 FDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFK 264

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
            M++ G+  S  +  S   SCA L  + LG Q+HG  LK    +DV +  A L +Y    
Sbjct: 265 EMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCN 324

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
            LS   K+F  +P H+  S+N++I  +A S+  + EA+  +  ++++G   + V+     
Sbjct: 325 NLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGI-EALGMFRLLQKSGLGLDEVSLSGAF 383

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
            A +       G QVH   +K    +   + NA+L  YGKCG + +   +F  M   RD 
Sbjct: 384 RACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVS-RDA 442

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           VSWN++I+ +  N    K ++L  +M+Q G   D FT+ +VL ACA    L  GME+H  
Sbjct: 443 VSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNR 502

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            +++ L  D  +G AL+DMYSKCG ++ A +  D +  + V SWN++ISG++     ++A
Sbjct: 503 IIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEA 562

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ------ 700
              FS+M   G  PD+ T+  +L  C++   V+ G        Q++  I + E       
Sbjct: 563 QKTFSKMLEMGVDPDNFTYATILDTCANLVTVELG-------KQIHAQIIKKELQSDAYI 615

Query: 701 FSCMVDLLGRAGELDKIEEFINKMP----ITPNSLI 732
            S +VD+  + G +   +    K P    +T N+++
Sbjct: 616 SSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMV 651



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 145/569 (25%), Positives = 263/569 (46%), Gaps = 52/569 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   +K GF  DV   + L+++Y +   L  + + F  MP++N VSW+ I++G       
Sbjct: 197 HGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDL 256

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
               ++FKEM +AG  +++    SV R+C   G S  + G Q+H   LK++   D ++  
Sbjct: 257 RGGLELFKEMQKAGVGVSQSTFASVFRSC--AGLSALRLGSQLHGHALKTDFGTDVVIGT 314

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
             + MY  C   +D A+++F  +   +L S+N+II  Y++    I    +F  +Q+ G  
Sbjct: 315 ATLDMYMKCNNLSD-AQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSG-- 371

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             L  +E +      A   +V+ G     Q+  +  K+   S++ V +A++  + + G  
Sbjct: 372 --LGLDEVSLSGAFRAC--AVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGAL 427

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------------- 274
             A  +FE+M+ ++ VS N ++    +                                 
Sbjct: 428 VEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKAC 487

Query: 275 --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                   G E+H  +I+S L     VG  L++MY+KCG ++ +  +   +  +  VSWN
Sbjct: 488 AGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWN 547

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            +ISG       EEA   F  M   G+   NF+  + L +CA+L  + LG+QIH + +K 
Sbjct: 548 AIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKK 607

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
            L SD  +S+ L+ +Y+  G +     +F   P  D V+WN+++  +A    L  EA+K 
Sbjct: 608 ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYA-QHGLGEEALKI 666

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYG 505
           +  M+     PN  TF+ +L A     + + G H  H+ +  Y +  +    + ++   G
Sbjct: 667 FEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMG 726

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           + G++    ++   M    D V W +++S
Sbjct: 727 RSGQVSKALELIEGMPFEADAVIWRTLLS 755



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 228/469 (48%), Gaps = 56/469 (11%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   LK  F  DV +    +++Y++  +L+ A KLF+ +P+ N  S+  I+ GY     
Sbjct: 297 LHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDK 356

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA  MF+ + ++G  L+  +L    RAC      G   G+QVH L +KS    +  V+
Sbjct: 357 GIEALGMFRLLQKSGLGLDEVSLSGAFRACAVI--KGDLEGLQVHGLSMKSLCQSNICVA 414

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N ++ MYG C    + A  +FEE+ +RD +SWN+II+ + Q G+      LF  M + G 
Sbjct: 415 NAILDMYGKCGALVE-ACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSG- 472

Query: 187 RYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
              ++P+E+T+GS++   A + ++  G  +  +I+    K+ L  D +VG AL+  +++ 
Sbjct: 473 ---MEPDEFTYGSVLKACAGWQALNCGMEIHNRII----KSRLGLDSFVGIALIDMYSKC 525

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG--------------------------------- 271
           G    A K+ +++ ++ VVS N ++ G                                 
Sbjct: 526 GMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATIL 585

Query: 272 --------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      GK++H  +I+  L     + + LV+MY+KCG + D + +F     +D V
Sbjct: 586 DTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFV 645

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGE 382
           +WN M+ G  Q+G  EEA+  F  M+ + +  ++ + ++ L +C  +G +  G    H  
Sbjct: 646 TWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSM 705

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI 430
               GLD  +   + ++ +   +G +S+ L++   MP E D V W +++
Sbjct: 706 LSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLL 754



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 190/409 (46%), Gaps = 48/409 (11%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
              C+    +  G+Q H   +       V V+N L+ +Y     L    KVF  MP+ D 
Sbjct: 49  FQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDT 108

Query: 424 VSWNSVIGAFADS---------------------EALVS---------EAVKYYLDMRRA 453
           VSWN+++  +A                        +L+S         + +  +L M R 
Sbjct: 109 VSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRM 168

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G   +  TF  +L + SS      G Q+H   +K     +    +ALL  Y KC ++D  
Sbjct: 169 GTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCS 228

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            + F  M E ++ VSW+++I+G + N+ L   + L   M + G  +   TFA+V  +CA 
Sbjct: 229 IQFFHSMPE-KNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAG 287

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           ++ L  G ++H   ++     DVVIG+A +DMY KC  +  A + F+ +P  N+ S+N++
Sbjct: 288 LSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAI 347

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I GYAR   G +AL +F  ++  G   D V+  G   AC+      EG        QV+G
Sbjct: 348 IVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGL-------QVHG 400

Query: 694 L-IPQLEQ-----FSCMVDLLGRAGELDK----IEEFINKMPITPNSLI 732
           L +  L Q      + ++D+ G+ G L +     EE +++  ++ N++I
Sbjct: 401 LSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAII 449



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 124/263 (47%), Gaps = 37/263 (14%)

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           TF +I    S       G Q HA++I         + N L+  Y KC +++   K+F  M
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 521 SER------------------------------RDEVSWNSMISGYIHNELLPKAMNLVW 550
            +R                              RD VSWNS+ISGY+HN    K +++  
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 551 FMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCG 610
            M + G   D  TFA VL +C+S+     G+++H   V+   + DVV GSAL+DMY+KC 
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
           ++D + +FF  MP +N  SW+++I+G  ++      L LF +M+  G      TF  V  
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFR 283

Query: 671 ACSHAGLVDEGFKHFKSMSQVYG 693
           +C+       G    +  SQ++G
Sbjct: 284 SCA-------GLSALRLGSQLHG 299



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 47/218 (21%)

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           TF+ +   C+    L  G + HA  +    +  V + + L+ MY KC  +++A + FD M
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 623 PVRNVYSWNSM-------------------------------ISGYARHGHGDKALTLFS 651
           P R+  SWN+M                               ISGY  +G   K + +F 
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC-------M 704
           QM   G + D  TF  VL +CS   L D G        Q++GL  ++  F C       +
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCS--SLEDHG-----GGIQIHGLAVKM-GFDCDVVTGSAL 215

Query: 705 VDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
           +D+  +  +LD   +F + MP   N + W  ++  C +
Sbjct: 216 LDMYAKCKKLDCSIQFFHSMP-EKNWVSWSAIIAGCVQ 252



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 52/97 (53%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H QI+K     D ++ +TL+++Y + G++     +F++ P+R+ V+W  +V GY  
Sbjct: 597 GKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQ 656

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G+  EA K+F+ M       N     +VLRAC   G
Sbjct: 657 HGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMG 693


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 257/716 (35%), Positives = 401/716 (56%), Gaps = 22/716 (3%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMN------GLMEGRRKGKEVH 279
           DL+  + LV G+A+ G F  A  ++ +M    I+ +V +        G +    +G+EVH
Sbjct: 159 DLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVH 218

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
            ++IR G    V V N L+ MY KCG I  +R VF  M  +D +SWN MISG  +N    
Sbjct: 219 LHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCL 278

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           E +  F  MR   +     ++ S +S+C +LG   LG+++HG  +K G  ++VSV+N+L+
Sbjct: 279 EGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLI 338

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
            +++  G       VF  M   D VSW ++I  + +   L  +AV+ Y  M   G  P+ 
Sbjct: 339 QMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGY-EKNGLPEKAVETYTIMEHEGVVPDE 397

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           +T  ++L+A +   +   G  +H    +  + +   + N+L+  Y KC  +D   ++F R
Sbjct: 398 ITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHR 457

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR--GQRLDHFTFATVLSACASVATL 577
           +  + + +SW S+I G   N    ++   ++F  Q     + +  T  +VLSACA +  L
Sbjct: 458 IPNK-NVISWTSIILGLRLNY---RSFEALFFFQQMILSLKPNSVTLVSVLSACARIGAL 513

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
             G E+HA  +R  L FD  + +AL+DMY +CGR++ A   F+    ++V SWN +++GY
Sbjct: 514 SCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGY 572

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
           A+ G G  A+ LF +M      PD +TF  +L ACS +G+V +G ++F+SM   + + P 
Sbjct: 573 AQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPN 632

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
           L+ ++ +VDLLGRAG L+   EFI KMPI P+  IW  +L AC     +  ELG  AA  
Sbjct: 633 LKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNAC--RIYQNVELGELAAQH 690

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           +FEM+ ++   Y+LL N+YA  GKW++VA+ RK M+E  +  + GCSWV +   VH F+ 
Sbjct: 691 IFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLT 750

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL 877
           GD+ HP+   I   L+   +KM   G +  +K +  D    SK ++   HSE++A+AF L
Sbjct: 751 GDDFHPQIKEINAVLEGFYEKMEATG-LSMSKDSRRDDIDASKAEIFCGHSERLAIAFGL 809

Query: 878 TRN-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
                  PI + KNL +C +CH+  KFISK+V R I +RD+ +FHHF DG CSCGD
Sbjct: 810 INTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGD 865



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 167/570 (29%), Positives = 283/570 (49%), Gaps = 40/570 (7%)

Query: 259 QKNVVSMNGLMEGRR---KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
           ++  +++  L E +R   +G  VH Y+ ++     V +GN L++M+ + G + ++  VF 
Sbjct: 94  EETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFG 153

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M  +D  SWN ++ G  + G ++EA+  +  M   G+    ++    L +C  L  +  
Sbjct: 154 KMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLAR 213

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G+++H   ++ G +SDV V NAL+++Y   G +     VF  MP  D++SWN++I  + +
Sbjct: 214 GREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFE 273

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           ++  + E ++ +  MR     P+ +T  ++++A  +    +LG +VH  VIK     E +
Sbjct: 274 NDVCL-EGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVS 332

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           + N+L+  +   G  D+ E +F++M E +D VSW +MISGY  N L  KA+     M   
Sbjct: 333 VNNSLIQMHSSVGCWDEAEMVFSKM-EFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHE 391

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G   D  T A+VLSACA +  L++G+ +H    R  L   V++ ++L+DMYSKC  ID A
Sbjct: 392 GVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKA 451

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC--- 672
              F  +P +NV SW S+I G   +    +AL  F QM L    P+ VT V VLSAC   
Sbjct: 452 LEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLK-PNSVTLVSVLSACARI 510

Query: 673 ----------SHAGLVDEGFKHF--KSMSQVY----GLIPQLEQF-SCMVDL-------- 707
                     +HA     GF  F   ++  +Y     + P   QF SC  D+        
Sbjct: 511 GALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLT 570

Query: 708 -LGRAGELDKIEEFINKM---PITPNSLIWRTVLGACCRANCRKTELGR-KAANMLFEME 762
              + G+     E  +KM    + P+ + + ++L AC R+      L   ++    F + 
Sbjct: 571 GYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIA 630

Query: 763 PQNAVNYVLLANMYASGGKWEDVAKARKAM 792
           P N  +Y  + ++    G+ ED  +  K M
Sbjct: 631 P-NLKHYASVVDLLGRAGRLEDAYEFIKKM 659



 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 155/558 (27%), Positives = 259/558 (46%), Gaps = 54/558 (9%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           V L N L++++VR GDL  A  +F +M +R+  SW  +V GY   G  +EA  ++  M+ 
Sbjct: 129 VRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLW 188

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
            G   + Y    VLR C   G      G +VH  V++     D  V N LI MY  C + 
Sbjct: 189 VGIRPDVYTFPCVLRTCG--GLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDI 246

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
              AR +F+ +  RD ISWN++IS Y +    +   +LF  M RE F   + P+  T  S
Sbjct: 247 FS-ARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFF-MMREFF---VDPDLMTMTS 301

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           +I+A     L    L +++   V K G ++++ V ++L+   + +G +  A  +F +M  
Sbjct: 302 VISAC--EALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEF 359

Query: 260 KNVVSMNGLMEGRR-----------------------------------------KGKEV 278
           K++VS   ++ G                                           KG  +
Sbjct: 360 KDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIML 419

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H +  R+GL   V V N L++MY+KC  ID +  VF  +  K+ +SW ++I GL  N   
Sbjct: 420 HEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRS 479

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
            EA+  F  M    L  ++ +L+S LS+CA +G +  G++IH   L+ GL  D  + NAL
Sbjct: 480 FEALFFFQQMIL-SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNAL 538

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           L +Y   G +      F    E D  SWN ++  +A  +     AV+ +  M  +  +P+
Sbjct: 539 LDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYA-QQGKGGLAVELFHKMIESDVNPD 596

Query: 459 GVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
            +TF ++L A S   M   G +   +   K+++A       +++   G+ G ++D  +  
Sbjct: 597 EITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFI 656

Query: 518 ARMSERRDEVSWNSMISG 535
            +M    D   W ++++ 
Sbjct: 657 KKMPIDPDPAIWGALLNA 674



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 220/445 (49%), Gaps = 6/445 (1%)

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N++I  L   G  E+A+++  +M+   +     + I+ L  C        G ++H    K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
                 V + NALLS++   G L     VF  M E D  SWN ++G +A +     EA+ 
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKA-GYFDEALN 181

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            Y  M   G  P+  TF  +L           G +VH  VI+Y   ++  + NAL++ Y 
Sbjct: 182 LYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           KCG++     +F RM  RRD +SWN+MISGY  N++  + + L + M +     D  T  
Sbjct: 242 KCGDIFSARLVFDRMP-RRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMT 300

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           +V+SAC ++     G EVH   ++     +V + ++L+ M+S  G  D A   F  M  +
Sbjct: 301 SVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFK 360

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
           ++ SW +MISGY ++G  +KA+  ++ M+ +G +PD +T   VLSAC+  GL+D+G    
Sbjct: 361 DLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIM-L 419

Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANC 745
              +   GL   +   + ++D+  +   +DK  E  +++P   N + W +++    R N 
Sbjct: 420 HEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILG-LRLNY 477

Query: 746 RKTELGRKAANMLFEMEPQNAVNYV 770
           R  E       M+  ++P N+V  V
Sbjct: 478 RSFEALFFFQQMILSLKP-NSVTLV 501



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 222/470 (47%), Gaps = 58/470 (12%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           HL ++++GF  DV + N LI +YV+ GD+ SA  +FD MP R+ +SW  ++SGY    + 
Sbjct: 218 HLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVC 277

Query: 68  NEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            E  ++F  M+R  F+  +   + SV+ AC+  G    + G +VH  V+K+    +  V+
Sbjct: 278 LEGLRLFF-MMREFFVDPDLMTMTSVISACEALGDE--RLGREVHGYVIKTGFVAEVSVN 334

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI M+ S +   D A  +F ++E +DL+SW ++IS Y + G      + ++ M+ EG 
Sbjct: 335 NSLIQMHSS-VGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEG- 392

Query: 187 RYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
              + P+E T  S+++A A   +L    +L +      + GL S + V ++L+  +++  
Sbjct: 393 ---VVPDEITIASVLSACAGLGLLDKGIMLHE---FADRTGLTSYVIVANSLIDMYSKCR 446

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------- 274
               A ++F ++  KNV+S   ++ G R                                
Sbjct: 447 CIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLSA 506

Query: 275 ---------GKEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                    GKE+H + +R+GL FD   + N L++MY +CG ++ + + F     KD  S
Sbjct: 507 CARIGALSCGKEIHAHALRTGLGFDGF-LPNALLDMYVRCGRMEPAWNQFN-SCEKDVAS 564

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEG 383
           WN +++G  Q G    A+  F  M    +     +  S L +C+  G +  G +      
Sbjct: 565 WNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESME 624

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            K  +  ++    +++ L   AG L    +    MP + D   W +++ A
Sbjct: 625 HKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNA 674


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 254/666 (38%), Positives = 382/666 (57%), Gaps = 13/666 (1%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +G+  H  +I+ GL   V   N LV +YAK G + D+  VF  M  +D VSWNTM+ G  
Sbjct: 138 EGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYV 197

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSL--ISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
            NG    A+  F  M  D L   + S+  I+ L++C     + LG++IHG  ++ GL+ D
Sbjct: 198 SNGMGALALACFREMN-DALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQD 256

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           V V  +L+ +Y   G +     VF  MP    V+WN +IG +A +E  V +A   ++ MR
Sbjct: 257 VKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPV-DAFDCFMQMR 315

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             G+    VT IN+L A +       G  VHA V++ +      +E ALL  YGK G+++
Sbjct: 316 VDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVE 375

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
             EKIF +++++   VSWN+MI+ Y++ E+  +A+ L   ++ +    D+FT  TV+ A 
Sbjct: 376 SSEKIFGQITDK-TLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAF 434

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
             + ++ +  ++H+  V+       +I +A++ MY++CG I  +   FD MP ++V SWN
Sbjct: 435 VLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWN 494

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           ++I GYA HG G  AL +F +MK  G  P+  TFV VL+ACS +GL  EG+K F SM Q 
Sbjct: 495 TIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQE 554

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
           YG+IPQ+E + CM DLLGRAGEL ++  FI  MPI P S IW ++L A    N    ++ 
Sbjct: 555 YGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTASRNKN--DIDIA 612

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
             AA  +F++E  N   YV+L++MYA  G+WEDV + R  MKE  +++    S V + + 
Sbjct: 613 EYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEKGLRRTEARSLVELNNK 672

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEP--ESKEDLVSYHSE 869
              FV GD SHP+ + I+E    L+   R+ G    +   L D +P   S   L + HS 
Sbjct: 673 ECSFVNGDMSHPQSEKIHEFSDILS---RNIGEDLDSSSNLRDSDPFASSTTVLPNKHSV 729

Query: 870 KIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKC 928
           ++AVAF +++  +  P+ + KN+RVC  CH A K ISK  GR+IV+ D+  +H F+DG C
Sbjct: 730 RLAVAFGLISSEAGSPVLVKKNVRVCNHCHHALKLISKYSGRKIVVGDTKIYHIFSDGSC 789

Query: 929 SCGDYW 934
            CGDYW
Sbjct: 790 CCGDYW 795



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 209/443 (47%), Gaps = 7/443 (1%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           L+  +   G +D++   F  +    +   N MI G        +A+  + AM   G    
Sbjct: 60  LILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPD 119

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
            F+    L  CA  G +  G+  H   +KLGL +DV  +N+L++LYA  G +    +VF 
Sbjct: 120 RFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFD 179

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA-GWSPNGVTFINILAAASSFSMG 475
            MP  D VSWN+++  +  S  + + A+  + +M  A     + V  I  LAA    S  
Sbjct: 180 GMPARDIVSWNTMVDGYV-SNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESAL 238

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
            LG ++H   I++ +  +  +  +L+  Y KCG +   E +FA+M   R  V+WN MI G
Sbjct: 239 ALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMP-LRTVVTWNCMIGG 297

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
           Y  NE    A +    M   G +++  T   +L+ACA   +   G  VHA  VR      
Sbjct: 298 YALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPH 357

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
           VV+ +AL++MY K G+++ + + F  +  + + SWN+MI+ Y       +A+ LF ++ L
Sbjct: 358 VVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLEL-L 416

Query: 656 DGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
           + PL PD+ T   V+ A    G + +  K   S     G        + ++ +  R G +
Sbjct: 417 NQPLYPDYFTMTTVVPAFVLLGSIRQ-CKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNI 475

Query: 715 DKIEEFINKMPITPNSLIWRTVL 737
               E  +KMP   + + W T++
Sbjct: 476 VASREIFDKMP-GKDVISWNTII 497



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/553 (23%), Positives = 234/553 (42%), Gaps = 51/553 (9%)

Query: 25  TLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLL 84
           +LI  +V  G +  A+  F  +    +     ++ G+    +  +A   ++ M+ AG   
Sbjct: 59  SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118

Query: 85  NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCAR 144
           +R+    VL+ C   G  G   G   H  V+K     D   +N L+A+Y       D A 
Sbjct: 119 DRFTFPVVLKCCARAGALGE--GRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGD-AE 175

Query: 145 RIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA 204
           R+F+ +  RD++SWN+++  Y   G        F  M       +L+    + G +   A
Sbjct: 176 RVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMND-----ALQVGHDSVGVIAALA 230

Query: 205 YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS 264
              + S   L ++I     + GL  D+ VG++LV  + + GN ++A  +F +M  + VV+
Sbjct: 231 ACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVT 290

Query: 265 MNGLMEG----RRK-------------------------------------GKEVHGYLI 283
            N ++ G     R                                      G+ VH Y++
Sbjct: 291 WNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVV 350

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
           R      V +   L+ MY K G ++ S  +F  +  K  VSWN MI+       Y+EAI 
Sbjct: 351 RRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIA 410

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            F  +    L    F++ + + +   LG I   +Q+H   +KLG      + NA++ +YA
Sbjct: 411 LFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYA 470

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
             G +    ++F  MP  D +SWN++I  +A        A++ + +M+ +G  PN  TF+
Sbjct: 471 RCGNIVASREIFDKMPGKDVISWNTIIIGYA-IHGQGKIALEMFDEMKCSGMEPNESTFV 529

Query: 464 NILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
           ++L A S   +   G  + ++   +Y +  +      +    G+ GE+ +  +    M  
Sbjct: 530 SVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPI 589

Query: 523 RRDEVSWNSMISG 535
                 W S+++ 
Sbjct: 590 APTSRIWGSLLTA 602



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 205/459 (44%), Gaps = 50/459 (10%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H  ++K G   DV+  N+L+ +Y ++G +  A ++FD MP R+ VSW  +V GY 
Sbjct: 138 EGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYV 197

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             GM   A   F+EM  A   +   ++G +      C  S    G ++H   ++     D
Sbjct: 198 SNGMGALALACFREMNDA-LQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQD 256

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V   L+ MY  C  +   A  +F ++  R +++WN +I  Y+     +  F  F +M+
Sbjct: 257 VKVGTSLVDMYCKC-GNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMR 315

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            +GF+  +     T  +L+TA   +    S   + + A V +   L  + + +AL+  + 
Sbjct: 316 VDGFQVEV----VTAINLLTACAQT--ESSLFGRSVHAYVVRRHFLPHVVLETALLEMYG 369

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------------ 272
           ++G    + KIF Q+  K +VS N ++                                 
Sbjct: 370 KVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTT 429

Query: 273 -----------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                      R+ K++H Y+++ G  D   + N +++MYA+CG I  SR +F  M GKD
Sbjct: 430 VVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKD 489

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIH 380
            +SWNT+I G   +G  + A+  F  M+  G+  +  + +S L++C+  G    G ++ +
Sbjct: 490 VISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFN 549

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
               + G+   +     +  L   AG L   L+    MP
Sbjct: 550 SMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMP 588



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 117/250 (46%), Gaps = 4/250 (1%)

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV 549
           +++  +   +L+  +   G MD+    FA ++ R      N MI G+   +L   A+   
Sbjct: 50  ISSSGSRPKSLILSHVAAGRMDEAADAFAGVT-RPGAFLHNVMIRGFADADLPLDALAAY 108

Query: 550 WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
             M+  G R D FTF  VL  CA    L  G   HA  ++  L  DV   ++LV +Y+K 
Sbjct: 109 RAMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKL 168

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGV 668
           G +  A R FD MP R++ SWN+M+ GY  +G G  AL  F +M     +  D V  +  
Sbjct: 169 GLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAA 228

Query: 669 LSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITP 728
           L+AC     +  G +     +  +GL   ++  + +VD+  + G +   E    KMP+  
Sbjct: 229 LAACCLESALALG-REIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLR- 286

Query: 729 NSLIWRTVLG 738
             + W  ++G
Sbjct: 287 TVVTWNCMIG 296



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 53/99 (53%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  I+K G+     + N ++++Y R G++ ++ ++FD+MP ++ +SW  I+ GY
Sbjct: 441 RQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGY 500

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G    A +MF EM  +G   N     SVL AC   G
Sbjct: 501 AIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSG 539


>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 229/533 (42%), Positives = 327/533 (61%), Gaps = 42/533 (7%)

Query: 403 ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
           A  G +    KVF  MPEH+ +SW ++I A+  S     EA++ +  M  A  +  G   
Sbjct: 6   AADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVNCVG--- 62

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
                                              N+L+S Y + G M+D  K F  + E
Sbjct: 63  -----------------------------------NSLISMYARSGRMEDARKAFDILFE 87

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
           + + VS+N+++ GY  N    +A  L   +   G  +  FTFA++LS  AS+  + +G +
Sbjct: 88  K-NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 146

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
           +H   ++   + +  I +AL+ MYS+CG I+ A + F+ M  RNV SW SMI+G+A+HG 
Sbjct: 147 IHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGF 206

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
             +AL +F +M   G  P+ +T+V VLSACSH G++ EG KHF SM + +G++P++E ++
Sbjct: 207 ATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA 266

Query: 703 CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
           CMVDLLGR+G L +  EFIN MP+  ++L+WRT+LGA CR +   TELGR AA M+ E E
Sbjct: 267 CMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA-CRVH-GNTELGRHAAEMILEQE 324

Query: 763 PQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESH 822
           P +   Y+LL+N++AS G+W+DV K RK+MKE  + KEAGCSW+ +++ VH F  G+ SH
Sbjct: 325 PDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSH 384

Query: 823 PEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK 882
           P+   IY++L +L  K+++ GY+P T F L D+E E KE  +  HSEKIAVAF L   S+
Sbjct: 385 PQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQ 444

Query: 883 -LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             PIRI KNLRVCGDCH+A K+IS   GREIV+RDSNRFHH  +G CSC DYW
Sbjct: 445 SKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 497



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 147/291 (50%), Gaps = 10/291 (3%)

Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLF-DMVA-----VGNGLVNMYAK 303
           +RK+FEQM + NV+S   ++    +  E     I   LF  M++     VGN L++MYA+
Sbjct: 14  SRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIE--LFCKMISASVNCVGNSLISMYAR 71

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
            G ++D+R  F  +  K+ VS+N ++ G  +N   EEA + F  +   G+  S F+  S 
Sbjct: 72  SGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASL 131

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           LS  AS+G +  G+QIHG  LK G  S+  + NAL+S+Y+  G +    +VF  M + + 
Sbjct: 132 LSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNV 191

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           +SW S+I  FA      + A++ +  M   G  PN +T++ +L+A S   M   G +   
Sbjct: 192 ISWTSMITGFA-KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFN 250

Query: 484 QVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            + K + +         ++   G+ G + +  +    M    D + W +++
Sbjct: 251 SMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 301



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 117/234 (50%), Gaps = 8/234 (3%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N+LI++Y R G +  A K FD + ++N VS+  IV GY     S EA  +F E+   G  
Sbjct: 63  NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 122

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           ++ +   S+L      G  G   G Q+H  +LK     +  + N LI+MY  C  + + A
Sbjct: 123 ISAFTFASLLSGAASIGAMG--KGEQIHGRLLKGGYKSNQCICNALISMYSRC-GNIEAA 179

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
            ++F E+E R++ISW S+I+ +++ G      ++F +M   G     KPNE T+ ++++A
Sbjct: 180 FQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG----TKPNEITYVAVLSA 235

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
             S V   S   +   +M K+ G++  +   + +V    R G    A +    M
Sbjct: 236 C-SHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSM 288



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 147/347 (42%), Gaps = 90/347 (25%)

Query: 132 MYGSCLE--STDCARRIFEEIETRDLISWNSIISVYSQRGD-TISVFKLFSRMQREGFRY 188
           MY  C    S D +R++FE++   +++SW +II+ Y Q G+      +LF +M       
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM------- 53

Query: 189 SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
                       I+A+ + V                         G++L+S +AR G   
Sbjct: 54  ------------ISASVNCV-------------------------GNSLISMYARSGRME 76

Query: 249 YARKIFEQMIQKNVVSMNGLMEGRR----------------------------------- 273
            ARK F+ + +KN+VS N +++G                                     
Sbjct: 77  DARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAA 136

Query: 274 ------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
                 KG+++HG L++ G      + N L++MY++CG I+ +  VF  M  ++ +SW +
Sbjct: 137 SIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTS 196

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-L 386
           MI+G  ++G    A+  F  M   G   +  + ++ LS+C+ +G I  GQ+      K  
Sbjct: 197 MITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEH 256

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           G+   +     ++ L   +G L   ++    MP   D + W +++GA
Sbjct: 257 GIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 303



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 176/408 (43%), Gaps = 73/408 (17%)

Query: 34  GDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSN-EACKMFKEMVRAGFLLNRYALGSV 92
           G +  + K+F++MP+ N +SW  I++ Y   G  + EA ++F +M+ A            
Sbjct: 9   GSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISAS----------- 57

Query: 93  LRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIET 152
                            V+C            V N LI+MY       D AR+ F+ +  
Sbjct: 58  -----------------VNC------------VGNSLISMYARSGRMED-ARKAFDILFE 87

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGS 212
           ++L+S+N+I+  Y++   +   F LF+ +   G   S     +TF SL++ A S    G 
Sbjct: 88  KNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISA----FTFASLLSGAASIGAMGK 143

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR 272
              +QI   + K G  S+  + +AL+S ++R GN   A ++F +M  +NV+S   ++ G 
Sbjct: 144 G--EQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGF 201

Query: 273 RKGKEVHGYLIRS--GLFDMVAVGN--------GLVNMYAKCGTIDDSRSVFRFMIGKDS 322
            K    HG+  R+      M+  G          +++  +  G I + +  F  M  +  
Sbjct: 202 AK----HGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHG 257

Query: 323 V-----SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
           +      +  M+  L ++G   EA+    +M    LM+      + L +C   G   LG+
Sbjct: 258 IVPRMEHYACMVDLLGRSGLLVEAMEFINSM---PLMADALVWRTLLGACRVHGNTELGR 314

Query: 378 QIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLKVFFLMPEHDQV 424
             H   + L  + D   +  LLS L+A AG     +K+   M E + +
Sbjct: 315 --HAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 360



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 56/94 (59%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H ++LK G+  +  +CN LI++Y R G++ +A ++F+EM DRN +SW  +++G+   G 
Sbjct: 147 IHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGF 206

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           +  A +MF +M+  G   N     +VL AC   G
Sbjct: 207 ATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 240



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 113/244 (46%), Gaps = 57/244 (23%)

Query: 504 YGKC---GEMDDCEKIFARMSERRDEVSWNSMISGYIHN-ELLPKAMNLVWFMMQRGQRL 559
           Y KC   G +DD  K+F +M E  + +SW ++I+ Y+ + E   +A+ L           
Sbjct: 2   YAKCAADGSVDDSRKVFEQMPE-HNVMSWTAIITAYVQSGECDKEAIEL----------- 49

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
               F  ++SA  +                        +G++L+ MY++ GR++ A + F
Sbjct: 50  ----FCKMISASVN-----------------------CVGNSLISMYARSGRMEDARKAF 82

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           D++  +N+ S+N+++ GYA++   ++A  LF+++   G      TF  +LS  +  G + 
Sbjct: 83  DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 142

Query: 680 EGFKHFKSMSQVYGLIP----QLEQFSC--MVDLLGRAGELDKIEEFINKMPITPNSLIW 733
           +G        Q++G +     +  Q  C  ++ +  R G ++   +  N+M    N + W
Sbjct: 143 KG-------EQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME-DRNVISW 194

Query: 734 RTVL 737
            +++
Sbjct: 195 TSMI 198


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 237/673 (35%), Positives = 385/673 (57%), Gaps = 17/673 (2%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            + VHG++ ++G    + V   LVN Y +C    D+R +F  M  ++ V+W  +++G   
Sbjct: 97  ARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTL 156

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N      +  F  M   G   S+++L +TL++C +   + LG+Q+HG  +K G +S  S+
Sbjct: 157 NSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSM 216

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            N+L SLYA  G L   L+ F+ +PE + ++W ++I A A+ E  V   +  ++DM   G
Sbjct: 217 GNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDG 276

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             PN  T  ++++   +     LG QV A   K        ++N+ +  Y + GE D+  
Sbjct: 277 VMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAM 336

Query: 515 KIFARMSERRDEVSWNSMISGYIH------NELLPK-----AMNLVWFMMQRGQRLDHFT 563
           ++F +M E    ++WN+MISGY        ++L  +     A+ +   + +   + D FT
Sbjct: 337 RLFEQM-EDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFT 395

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           F+++LS C+++  LE+G ++HA  +++    DVV+ SALV+MY+KCG I  A++ F  MP
Sbjct: 396 FSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMP 455

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            R   +W SMISGY++HG   +A+ LF +M+L G  P+ +TFV +LSACS+AGLV+E   
Sbjct: 456 TRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEH 515

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
           +F  M + Y + P ++ + CM+D+  R G ++    FI +    PN  IW +++ A CR+
Sbjct: 516 YFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLV-AGCRS 574

Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
           +    EL   AA+ L E++P+    Y+LL NMY S  +W+DVA+ RK MK+ +V      
Sbjct: 575 H-GNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDR 633

Query: 804 SWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDL 863
           SW+T+KD V+ F A D +HP+   +Y+ L+ L +K +  GY P     L D E + K   
Sbjct: 634 SWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAA 693

Query: 864 --VSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRF 920
             + +HSE++AVA  L +      +R+ KN+ +C DCHS+ K  S +  REI++RDS R 
Sbjct: 694 GSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRL 753

Query: 921 HHFNDGKCSCGDY 933
           H F DG+CSCGD+
Sbjct: 754 HKFKDGRCSCGDF 766



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 195/427 (45%), Gaps = 70/427 (16%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H  + K G + D+F+  +L+N Y+R      A +LFD MP+RN V+W  +V+GYT 
Sbjct: 97  ARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTL 156

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                   ++F EM+  G   + Y LG+ L AC          G QVH   +K       
Sbjct: 157 NSQPALGLEVFVEMLEMGRYPSHYTLGATLNAC--LASCDVDLGKQVHGYAIKYGAESIT 214

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISV-FKLFSRMQ 182
            + N L ++Y   L S D A R F  I  +++I+W ++IS  ++  + + +   LF  M 
Sbjct: 215 SMGNSLCSLYAK-LGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDML 273

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL----QQILAMVKKAGLLSDLYVGSALV 238
            +G    + PNE+T  S+++      L G+ L     +Q+ A   K G  ++L V ++ +
Sbjct: 274 MDG----VMPNEFTLTSVMS------LCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTM 323

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--------------RRKG--------- 275
             + R G    A ++FEQM   ++++ N ++ G              R +G         
Sbjct: 324 YLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRD 383

Query: 276 -----------------------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
                                        +++H   I+SG    V V + LVNMY KCG 
Sbjct: 384 LKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGC 443

Query: 307 IDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
           I D+   F  M  +  V+W +MISG  Q+G  +EAI  F  MR  G+  +  + +S LS+
Sbjct: 444 IQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSA 503

Query: 367 CASLGWI 373
           C+  G +
Sbjct: 504 CSYAGLV 510



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 187/390 (47%), Gaps = 18/390 (4%)

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           +  L  C   G +   + +HG   K G  +D+ V+ +L++ Y          ++F  MPE
Sbjct: 82  VPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPE 141

Query: 421 HDQVSWNSVIGAFA-DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
            + V+W +++  +  +S+  +   ++ +++M   G  P+  T    L A  +     LG 
Sbjct: 142 RNVVTWTALVTGYTLNSQPAL--GLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGK 199

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           QVH   IKY   + T++ N+L S Y K G +D   + F R+ E ++ ++W +MIS    +
Sbjct: 200 QVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPE-KNVITWTTMISACAED 258

Query: 540 -ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
            E +   M+L   M+  G   + FT  +V+S C +   L  G +V A   +   E ++ +
Sbjct: 259 EECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPV 318

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR-----------HGHGDKAL 647
            ++ + +Y + G  D A R F+ M   ++ +WN+MISGYA+              G +AL
Sbjct: 319 KNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQAL 378

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDL 707
           T+F  +K     PD  TF  +LS CS    +++G +   + +   G +  +   S +V++
Sbjct: 379 TIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQG-EQIHAQTIKSGFLSDVVVNSALVNM 437

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVL 737
             + G +    +   +MP T   + W +++
Sbjct: 438 YNKCGCIQDANKAFLEMP-TRTFVTWTSMI 466



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 2/206 (0%)

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           G +   L P  +     M+  G+ +    +  +L  C    +L     VH    +     
Sbjct: 52  GGMEAPLRPLDVQEAMTMLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASA 111

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           D+ + ++LV+ Y +C     A R FD MP RNV +W ++++GY  +      L +F +M 
Sbjct: 112 DMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEML 171

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
             G  P H T    L+AC  +  VD G K     +  YG        + +  L  + G L
Sbjct: 172 EMGRYPSHYTLGATLNACLASCDVDLG-KQVHGYAIKYGAESITSMGNSLCSLYAKLGSL 230

Query: 715 DKIEEFINKMPITPNSLIWRTVLGAC 740
           D       ++P   N + W T++ AC
Sbjct: 231 DSALRAFWRIP-EKNVITWTTMISAC 255


>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 700

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/655 (36%), Positives = 381/655 (58%), Gaps = 15/655 (2%)

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
           F+++ + N L+N+Y KC  +  +R +F  M  +  VS+N ++ G   +G + E +  F  
Sbjct: 53  FNIIQL-NSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKN 111

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M       + +   + LS+CA  G +  G Q HG   K GL     V ++L+ +Y+   +
Sbjct: 112 MVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFH 171

Query: 408 LSRCLKVFFLMPEH-------DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +   L+V  L  EH       D   +NSV+ A  +S  L  EAV+    M   G   + V
Sbjct: 172 VDLALQV--LESEHGNIDNDNDAFCYNSVLNALVESGRL-GEAVEVLGRMVDEGVVWDSV 228

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           T+++++          LG QVHAQ++K  +  +  + + L+  +GKCG++    K+F  +
Sbjct: 229 TYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGL 288

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
            + R+ V W S+++ Y+ N    + +NL+  M + G   + FTFA +L+A A +A L  G
Sbjct: 289 -QNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHG 347

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
             +HA   +  ++  V++G+AL++MYSKCG ID +   F  M  R++ +WN+MI GY++H
Sbjct: 348 DLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQH 407

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
           G G +AL LF  M   G  P+HVTFVGVLSAC+H  LV+EGF +   + + + + P LE 
Sbjct: 408 GLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEH 467

Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
           ++C+V +L RAG L++ E F+    +  + + WR +L AC     R   LG K A  + +
Sbjct: 468 YTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIH--RNYNLGTKIAETILQ 525

Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           M+P++   Y LL+NMYA    W+ V   RK M+E  VKKE G SW+ +++ VHVF +   
Sbjct: 526 MDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGS 585

Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR- 879
           +HPE   IY K++ L + ++  GYVP  +  L D+E E KE  ++YHSEK+A+A+ L + 
Sbjct: 586 NHPECIQIYNKVQLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKI 645

Query: 880 NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            S  PIR++KNLR+C DCH+A K ISK+  R I++RD++RFHHF DG C+C D+W
Sbjct: 646 PSPAPIRVIKNLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/411 (30%), Positives = 185/411 (45%), Gaps = 67/411 (16%)

Query: 18  YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM 77
           +++   N+LIN+YV+   L  A  LFDEM  R+ VS+  ++ GY H G   E  K+FK M
Sbjct: 53  FNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNM 112

Query: 78  VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
           V + +  N Y   +VL AC   G   F+ GMQ H  + K    F   V + L+ MY  C 
Sbjct: 113 VSSLYQPNEYVFTTVLSACAHSGRV-FE-GMQCHGFLFKFGLVFHHFVKSSLVHMYSKCF 170

Query: 138 ESTDCARRIFEEIE-----TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKP 192
              D A ++ E          D   +NS+++   + G      ++  RM  EG  +    
Sbjct: 171 H-VDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWD--- 226

Query: 193 NEYTFGSLITAAYSSV--LSGSY----LLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
                    +  Y SV  L G      L  Q+ A + K GL  D++VGS LV  F + G+
Sbjct: 227 ---------SVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGD 277

Query: 247 FYYARKIFEQMIQKNVVSMNGLM---------------------EGR------------- 272
              ARK+F+ +  +NVV    LM                     EG              
Sbjct: 278 VLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNA 337

Query: 273 -------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                  R G  +H  + + G+ + V VGN L+NMY+KCG ID S  VF  M  +D ++W
Sbjct: 338 FAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITW 397

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           N MI G  Q+G  ++A++ F  M   G   ++ + +  LS+CA L  +  G
Sbjct: 398 NAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEG 448



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 128/490 (26%), Positives = 228/490 (46%), Gaps = 69/490 (14%)

Query: 104 FKFGMQVHCLVLKSNQT--------FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDL 155
             FG  +H  +L  NQ+        F+ +  N LI +Y  C      AR +F+E+  R +
Sbjct: 28  LNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKC-SKLRLARYLFDEMSLRSV 86

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS--VLSGSY 213
           +S+N ++  Y   G+ + V KLF  M    +    +PNEY F ++++A   S  V  G  
Sbjct: 87  VSYNVLMGGYLHSGEHLEVVKLFKNMVSSLY----QPNEYVFTTVLSACAHSGRVFEG-- 140

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE------------------ 255
              Q    + K GL+   +V S+LV  +++  +   A ++ E                  
Sbjct: 141 --MQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSV 198

Query: 256 ------------------QMIQKNVV-------SMNGLMEGRRK---GKEVHGYLIRSGL 287
                             +M+ + VV       S+ GL    R    G +VH  L++ GL
Sbjct: 199 LNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGL 258

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
              V VG+ LV+M+ KCG +  +R VF  +  ++ V W ++++   QNG +EE +     
Sbjct: 259 TFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSC 318

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M R+G MS+ F+    L++ A +  +  G  +H    KLG+ + V V NAL+++Y+  G 
Sbjct: 319 MDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGC 378

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +     VFF M   D ++WN++I  ++    L  +A+  + DM  AG  PN VTF+ +L+
Sbjct: 379 IDSSYDVFFDMRNRDIITWNAMICGYS-QHGLGKQALLLFQDMLSAGECPNHVTFVGVLS 437

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRD 525
           A +  ++   G     Q++K+    E  +E+   +++   + G +++ E        + D
Sbjct: 438 ACAHLALVNEGFYYLNQLMKH-FKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWD 496

Query: 526 EVSWNSMISG 535
            V+W  +++ 
Sbjct: 497 VVAWRVLLNA 506



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 9/218 (4%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q+LK G  +DVF+ + L++++ + GD+ SA K+FD + +RN V W  +++ Y   G  
Sbjct: 250 HAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEF 309

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            E   +   M R G + N +    +L A    G +  + G  +H  V K       +V N
Sbjct: 310 EETLNLLSCMDREGTMSNEFTFAVLLNAF--AGMAALRHGDLLHARVEKLGIKNRVIVGN 367

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI MY  C    D +  +F ++  RD+I+WN++I  YSQ G       LF  M   G  
Sbjct: 368 ALINMYSKC-GCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAG-- 424

Query: 188 YSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVK 223
               PN  TF  +++A     L   G Y L Q++   K
Sbjct: 425 --ECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFK 460



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 53/91 (58%)

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
           EF+++  ++L+++Y KC ++  A   FD M +R+V S+N ++ GY   G   + + LF  
Sbjct: 52  EFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKN 111

Query: 653 MKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
           M      P+   F  VLSAC+H+G V EG +
Sbjct: 112 MVSSLYQPNEYVFTTVLSACAHSGRVFEGMQ 142



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 21/172 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +   L H ++ K G    V + N LIN+Y + G + S+  +F +M +R+ ++W  ++ GY
Sbjct: 345 RHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGY 404

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKFGMQVHCLVLKSNQ 119
           +  G+  +A  +F++M+ AG   N      VL AC        GF +  Q    ++K  +
Sbjct: 405 SQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQ----LMKHFK 460

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIET--------RDLISWNSIIS 163
              GL        + +C+ +  C   + EE E          D+++W  +++
Sbjct: 461 VEPGL-------EHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLN 505


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 231/567 (40%), Positives = 352/567 (62%), Gaps = 9/567 (1%)

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
           G ++ G++IH   LKLG + DV V+ +L+ +Y+  G +    K+F  MP  D+ SWN++I
Sbjct: 8   GDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMI 67

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
             +  +    +EA+    +MR  G   + +T  ++L   +       G  +H  VIK+ +
Sbjct: 68  SGYCQN-GNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGL 126

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
             E  + NAL++ Y K G +   +K+F  +   +D VSWN++I+GY  N L  +A+  V+
Sbjct: 127 EFELFVSNALINMYAKFGSLGHAQKVFGLLI--KDVVSWNTLITGYAQNGLASEAIE-VY 183

Query: 551 FMMQRGQRL--DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
            +M+  + +  +  T+ ++L A + V  L++GM +H   ++ CL  DV +G+ L+DMY K
Sbjct: 184 LLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGK 243

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
           CG++D A   F  +P +N   WN+MIS Y  HG G+KAL LF +MK +   PDH+TFV +
Sbjct: 244 CGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSL 303

Query: 669 LSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITP 728
           LSACSH+GLV +    F  M + YG+ P L+ + CMVDL GRAGEL+    FI KMPI P
Sbjct: 304 LSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQP 363

Query: 729 NSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKA 788
           ++  W  +L A CR +    ELG+ A+  LFE++ +N   YVLL+N+YA+ GKWE V   
Sbjct: 364 DASAWGALLNA-CRIH-GNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDV 421

Query: 789 RKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQT 848
           R   ++  ++K  G S + + + V VF  G+++HP+ + IY +L++L  K++  GYVP  
Sbjct: 422 RSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPDF 481

Query: 849 KFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKI 907
            F L D+E + KE ++  HSE++A+A+ +++ + K PIRI KNLRVCGDCH+  KFIS I
Sbjct: 482 CFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFISII 541

Query: 908 VGREIVLRDSNRFHHFNDGKCSCGDYW 934
             REI++RDS+RFHHF  G CSCGDYW
Sbjct: 542 TEREIIVRDSSRFHHFKGGTCSCGDYW 568



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/376 (33%), Positives = 206/376 (54%), Gaps = 16/376 (4%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK++H  +++ G    V V   LV+MY++ G + D+R +F  M  +D  SWN MISG  Q
Sbjct: 13  GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQ 72

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG   EA+     MR +G+     ++ S L  CA +G I+ G+ IH   +K GL+ ++ V
Sbjct: 73  NGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFV 132

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR-A 453
           SNAL+++YA  G L    KVF L+ + D VSWN++I  +A +  L SEA++ YL M    
Sbjct: 133 SNALINMYAKFGSLGHAQKVFGLLIK-DVVSWNTLITGYAQN-GLASEAIEVYLLMEEHE 190

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
              PN  T+++IL A S     + G ++H QVIK  + ++  +   L+  YGKCG++DD 
Sbjct: 191 EIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDA 250

Query: 514 EKIFARMSERRDEVSWNSMISGY-IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
             +F ++  R++ V WN+MIS Y +H +   KA+ L   M     + DH TF ++LSAC+
Sbjct: 251 ISLFYQVP-RKNSVPWNAMISCYGVHGD-GEKALELFREMKAERVKPDHITFVSLLSACS 308

Query: 573 SVATLERG-----MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-N 626
               +        M     G++  L+        +VD++ + G ++ A  F   MP++ +
Sbjct: 309 HSGLVSDAQWCFNMMEEEYGIKPSLKH----YGCMVDLFGRAGELEMAFNFIKKMPIQPD 364

Query: 627 VYSWNSMISGYARHGH 642
             +W ++++    HG+
Sbjct: 365 ASAWGALLNACRIHGN 380



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 143/270 (52%), Gaps = 15/270 (5%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D K  H  +LK GF +DVF+  +L+++Y R G +  A KLFD+MP R+  SW  ++SGY 
Sbjct: 12  DGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYC 71

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G + EA  +  EM   G  ++   + SVL  C + G      G  +H  V+K    F+
Sbjct: 72  QNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVG--DILSGKLIHLYVIKHGLEFE 129

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             VSN LI MY     S   A+++F  +  +D++SWN++I+ Y+Q G      +++  M+
Sbjct: 130 LFVSNALINMYAK-FGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAIEVYLLME 187

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVGSALVS 239
                  + PN+ T+ S++  AYS V +    LQQ   I   V K  L SD++VG+ L+ 
Sbjct: 188 E---HEEIIPNQGTWVSIL-PAYSHVGA----LQQGMRIHGQVIKNCLYSDVFVGTCLID 239

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
            + + G    A  +F Q+ +KN V  N ++
Sbjct: 240 MYGKCGKLDDAISLFYQVPRKNSVPWNAMI 269


>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
 gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
          Length = 721

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/668 (36%), Positives = 380/668 (56%), Gaps = 20/668 (2%)

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +H  + R+GL     + N LV M AK G++ ++RS+F  +  K+  SWN +IS     G 
Sbjct: 63  IHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGH 122

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE-GLKLGLDSDVSVSN 396
              A+  F  M    +  +  +  + LS+C+SLG +  G++IH       G+   V +  
Sbjct: 123 PSTALHLFAKM---DVPPTAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDT 179

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           A+ S+YA  G LS    VF  +P  + VSWN++I A+A S     +A+  +  M   G  
Sbjct: 180 AIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVR 239

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV---ANETTIENALLSCYGKCGEMDDC 513
           P   TF+ +L A +  +  +   ++HA++++  +     +  ++NALL+ Y KCG ++  
Sbjct: 240 PCRATFVGVLGACNDVTSLE---KIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVA 296

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
             IF +M +RRD+VS N MI+ +    L  +++ +   M   G   D  TFA+V++AC+ 
Sbjct: 297 RDIFRKM-QRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSC 355

Query: 574 VATLERGMEVHACGV-----RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
              LE G  +H   V     R C   +VV+ +ALV MY KCG ++ A   F  M  +N  
Sbjct: 356 CGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSV 415

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           SWN+M++  A  G GD+A         +G   D  +F+ VL ACSH+G+++  + HF+ M
Sbjct: 416 SWNAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLM 475

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT 748
              + L+P  E + CMVDLL R+G L   +E +N MP +P+++ WRT+LG  CR      
Sbjct: 476 LSDFDLVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGG-CRVQ-GSL 533

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKK-EAGCSWVT 807
           E    AA   F +EPQN   Y LL+++Y++ GK +++ + R +MKE  ++K   G S + 
Sbjct: 534 ENAASAAEQAFNLEPQNTAPYTLLSSLYSATGKKDELVELRSSMKERGLRKLVPGRSVIE 593

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
           +   VH FVAGD SHP+ D I  +L  LN +++ AG+VP T   + DL+ E KE++++ H
Sbjct: 594 VHGRVHEFVAGDSSHPQIDKILRELDILNVELKQAGFVPSTDGVVHDLKTEDKEEILALH 653

Query: 868 SEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SEK+AVAF +++  S +P+ ++KNLRVC DCH A K ISK+  R I +RD+NRFH F  G
Sbjct: 654 SEKLAVAFGLISTKSGIPLLVLKNLRVCSDCHGAIKLISKLRSRVITVRDANRFHRFQSG 713

Query: 927 KCSCGDYW 934
            CSCGDYW
Sbjct: 714 TCSCGDYW 721



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 126/485 (25%), Positives = 220/485 (45%), Gaps = 70/485 (14%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S    + H +I + G     +L N L+ +  + G L  A  +FD +  +N  SW  I+S 
Sbjct: 57  SNSVSIIHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISA 116

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y H+G  + A  +F +M             + L AC   G    + G ++H  +  S   
Sbjct: 117 YAHRGHPSTALHLFAKM---DVPPTAMTFATALSACSSLG--DLQRGREIHARIKASRGI 171

Query: 121 FDGLVSNVLI-AMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDT-ISVFKLF 178
              ++ +  I +MY  C + +  A+ +F+ I  ++++SWN++I+ Y+Q G +      LF
Sbjct: 172 RPSVILDTAIFSMYAKCGDLST-AKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLF 230

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL---LSDLYVGS 235
            +M   G R    P   TF  ++  A + V S    L++I A + + GL   + D+ V +
Sbjct: 231 EKMAEHGVR----PCRATFVGVL-GACNDVTS----LEKIHARIVETGLQFDVRDVGVQN 281

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMN---------GL------------MEGRRK 274
           AL++ +A+ G+   AR IF +M +++ VSMN         GL            +EG  +
Sbjct: 282 ALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQ 341

Query: 275 --------------------GKEVHGYLI-----RSGLFDMVAVGNGLVNMYAKCGTIDD 309
                               GK +H  ++     R      V V   LV+MY KCGT++ 
Sbjct: 342 DDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQ 401

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +++VF+ M  K+SVSWN M++     G  +EA     A   +G+   + S IS L +C+ 
Sbjct: 402 AKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSH 461

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSN--ALLSLYADAGYLSRCLKVFFLMP-EHDQVSW 426
            G + +    H + +    D   +  N   ++ L A +G L    ++   MP   D ++W
Sbjct: 462 SGMLEVAYD-HFQLMLSDFDLVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAW 520

Query: 427 NSVIG 431
            +++G
Sbjct: 521 RTLLG 525


>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
 gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
          Length = 619

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/596 (39%), Positives = 342/596 (57%), Gaps = 41/596 (6%)

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           + +H   L+LGLD D  + N +L    + G  +   ++F    E +   +N++I     +
Sbjct: 27  KHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLN 86

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
           ++   E+++ Y  MR+ G SP+  TF  +L A +     KLG ++H  V+K    ++  +
Sbjct: 87  DSF-QESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFV 145

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSER--------------------------------- 523
             +L+S YGKCG +D+  K+F  + E+                                 
Sbjct: 146 NTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFD 205

Query: 524 ----RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
               +D VSW+SMI GY  N L  +A++L + M+  G R D +    VL ACA +  LE 
Sbjct: 206 GMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALEL 265

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G        R     + V+G+AL+DMY+KCGR+D A   F  M  +++  WN+ ISG A 
Sbjct: 266 GNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAM 325

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
            GH   A  LF QM+  G  PD  TFVG+L AC+HAGLVDEG ++F SM +V+ L P++E
Sbjct: 326 SGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIE 385

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            + CMVDLLGRAG LD+  + +  MP+  N+++W  +LG  CR + R T+L       L 
Sbjct: 386 HYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGG-CRLH-RDTQLVEGVLKQLI 443

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
            +EP N+ NYVLL+N+Y++  KWED AK R  M E  +KK  G SW+ +   VH F+ GD
Sbjct: 444 ALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGD 503

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLT 878
            SHP  + IY KL EL + ++ +GYVP T + LFD+E E KE  +  HSEK+A+AF +++
Sbjct: 504 TSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLIS 563

Query: 879 RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
                 IR++KNLRVCGDCH A K IS+  GREI++RD+NRFH FNDG CSC DYW
Sbjct: 564 TAPNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 198/439 (45%), Gaps = 35/439 (7%)

Query: 100 GPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWN 159
           G +  K    VH  +L+     D  + N ++  +     +T+ + RIF + +  ++  +N
Sbjct: 19  GFNSLKHLKHVHAALLRLGLDEDSYLLNKVLR-FSFNFGNTNYSHRIFHQTKEPNIFLFN 77

Query: 160 SIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQIL 219
           ++I             +++  M++EG    L P+ +TF  L+ A   + L  S L  ++ 
Sbjct: 78  TMIHGLVLNDSFQESIEIYHSMRKEG----LSPDSFTFPFLLKAC--ARLLDSKLGIKLH 131

Query: 220 AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVH 279
            +V KAG  SD +V ++LVS + + G    A K+F+ + +KNV +   ++ G        
Sbjct: 132 GLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISG-------- 183

Query: 280 GYLIRSGLFDMVAVGN--GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
                      + VG     ++M+ +      + SVF  M+ KD VSW++MI G   NG 
Sbjct: 184 ----------YIGVGKCREAIDMFRR------ACSVFDGMLEKDIVSWSSMIQGYASNGL 227

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
            +EA+  F  M  +G     ++++  L +CA LG + LG        +     +  +  A
Sbjct: 228 PKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTA 287

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+ +YA  G +    +VF  M + D V WN+ I   A S   V  A   +  M ++G  P
Sbjct: 288 LIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMS-GHVKAAFGLFGQMEKSGIEP 346

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKI 516
           +G TF+ +L A +   +   G Q    + + + +  E      ++   G+ G +D+  ++
Sbjct: 347 DGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQL 406

Query: 517 FARMSERRDEVSWNSMISG 535
              M    + + W +++ G
Sbjct: 407 VKSMPMEANAIVWGALLGG 425



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 110/472 (23%), Positives = 198/472 (41%), Gaps = 36/472 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  +L+ G   D +L N ++      G+   + ++F +  + N   +  ++ G 
Sbjct: 24  KHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGL 83

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                  E+ +++  M + G   + +    +L+AC     S  K G+++H LV+K+    
Sbjct: 84  VLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDS--KLGIKLHGLVVKAGCES 141

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V+  L+++YG C    D A ++F++I  +++ +W +IIS Y   G       +F R 
Sbjct: 142 DAFVNTSLVSLYGKC-GFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRA 200

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
               F   L+ +  ++ S+I    S+ L    L   +   +   G   D Y    ++   
Sbjct: 201 CSV-FDGMLEKDIVSWSSMIQGYASNGLPKEAL--DLFFKMLNEGFRPDCYAMVGVLCAC 257

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
           ARLG                             G      + R+       +G  L++MY
Sbjct: 258 ARLGAL-------------------------ELGNWASNLMDRNEFLGNPVLGTALIDMY 292

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
           AKCG +D +  VFR M  KD V WN  ISGL  +G  + A   F  M + G+     + +
Sbjct: 293 AKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFV 352

Query: 362 STLSSCASLGWIMLGQQIHGEGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP- 419
             L +C   G +  G+Q      ++  L  ++     ++ L   AG+L    ++   MP 
Sbjct: 353 GLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPM 412

Query: 420 EHDQVSWNSVIGA--FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
           E + + W +++G         LV   +K  + +  +  S N V   NI +A+
Sbjct: 413 EANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSN-SGNYVLLSNIYSAS 463



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 141/319 (44%), Gaps = 46/319 (14%)

Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
           S+  L H VHA +++  +  ++ + N +L      G  +   +IF +  E  +   +N+M
Sbjct: 22  SLKHLKH-VHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEP-NIFLFNTM 79

Query: 533 ISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL 592
           I G + N+   +++ +   M + G   D FTF  +L ACA +   + G+++H   V+A  
Sbjct: 80  IHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGC 139

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV------------------------- 627
           E D  + ++LV +Y KCG ID A + FD +P +NV                         
Sbjct: 140 ESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRR 199

Query: 628 -------------YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
                         SW+SMI GYA +G   +AL LF +M  +G  PD    VGVL AC+ 
Sbjct: 200 ACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACAR 259

Query: 675 AGLVDEG--FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI 732
            G ++ G    +    ++  G  P L   + ++D+  + G +D   E    M    + ++
Sbjct: 260 LGALELGNWASNLMDRNEFLG-NPVLG--TALIDMYAKCGRMDSAWEVFRGMR-KKDIVV 315

Query: 733 WRTVLGACCRANCRKTELG 751
           W   +     +   K   G
Sbjct: 316 WNAAISGLAMSGHVKAAFG 334



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 85/364 (23%), Positives = 156/364 (42%), Gaps = 59/364 (16%)

Query: 3   DAKL---FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNS-------- 51
           D+KL    H  ++K G   D F+  +L+++Y + G + +A K+FD++P++N         
Sbjct: 123 DSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIIS 182

Query: 52  ------------------------------VSWACIVSGYTHKGMSNEACKMFKEMVRAG 81
                                         VSW+ ++ GY   G+  EA  +F +M+  G
Sbjct: 183 GYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEG 242

Query: 82  FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD 141
           F  + YA+  VL AC   G    + G     L+ ++    + ++   LI MY  C    D
Sbjct: 243 FRPDCYAMVGVLCACARLG--ALELGNWASNLMDRNEFLGNPVLGTALIDMYAKC-GRMD 299

Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
            A  +F  +  +D++ WN+ IS  +  G   + F LF +M++ G    ++P+  TF  L+
Sbjct: 300 SAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSG----IEPDGNTFVGLL 355

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQK 260
            A   + L      Q   +M +   L  ++     +V    R G    A ++ + M ++ 
Sbjct: 356 CACTHAGLVDEG-RQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEA 414

Query: 261 NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAV-----GNG--LVNMYAKCGTIDDSRSV 313
           N +    L+ G R  ++    L+   L  ++A+     GN   L N+Y+     +D+  +
Sbjct: 415 NAIVWGALLGGCRLHRDTQ--LVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKI 472

Query: 314 FRFM 317
              M
Sbjct: 473 RSIM 476


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 253/721 (35%), Positives = 404/721 (56%), Gaps = 55/721 (7%)

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDLYVG 234
           +F  +QR+   +   PNE+   S+I A      V  G+    Q+   V ++G   D+YVG
Sbjct: 23  VFVDLQRKSGEH---PNEFVLASVIRACTQLGVVEKGA----QLHGFVVRSGFDQDVYVG 75

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------- 274
           ++L+  +++ GB   AR +F+Q+++K  V+   ++ G  K                    
Sbjct: 76  TSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVV 135

Query: 275 ---------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
                                GK++H Y++R G    V+V N L++ Y KC  +   R +
Sbjct: 136 PDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKL 195

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           F  M+ K+ +SW TMISG  QN    EA+  F  M R G     F+  S L+SC SL  +
Sbjct: 196 FDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEAL 255

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
             G+Q+H   +K  L+S+  V N L+ +YA +  L    KVF +M E + +S+N++I  +
Sbjct: 256 EQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGY 315

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE 493
           +  E L SEA++ + +MR   + P+ +TF+++L  ++S    +L  Q+H  +IK  V+ +
Sbjct: 316 SSQEKL-SEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLD 374

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM 553
               +AL+  Y KC  + D   +F  M+E+ D V WN+M  GY  +    +A+ L   + 
Sbjct: 375 LFAGSALIDVYSKCSYVKDARHVFEEMNEK-DIVVWNAMFFGYTQHLENEEALKLYSTLQ 433

Query: 554 QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID 613
              Q+ + FTFA +++A +++A+L  G + H   V+  L+F   + +ALVDMY+KCG I+
Sbjct: 434 FSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIE 493

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
            A + F+    R+V  WNSMIS +A+HG  ++AL +F +M  +G  P++VTFV VLSACS
Sbjct: 494 EARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACS 553

Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
           HAG V++G  HF SM   +G+ P  E ++C+V LLGR+G+L + +EFI KMPI P +++W
Sbjct: 554 HAGXVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVW 612

Query: 734 RTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMK 793
           R++L AC  A     ELG+ AA M    +P+++ +Y+LL+N++AS G W DV K R  M 
Sbjct: 613 RSLLSACRIAG--NVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMD 670

Query: 794 EAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALF 853
            +EV KE G SW+ + + V+VF+A   +H E D+I   L  L Q ++ AGYVP     L 
Sbjct: 671 SSEVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLDILIQHIKGAGYVPDATALLM 730

Query: 854 D 854
           +
Sbjct: 731 N 731



 Score =  235 bits (599), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 160/578 (27%), Positives = 281/578 (48%), Gaps = 58/578 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K A+L H  +++ GF  DV++  +LI+ Y + GB+  A  +FD++ ++ +V+W  I++GY
Sbjct: 55  KGAQL-HGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGY 113

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKF---GMQVHCLVLKSN 118
           T  G S  + ++F +M     + +RY + SVL AC     S  +F   G Q+H  VL+  
Sbjct: 114 TKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSAC-----SMLEFLEGGKQIHAYVLRRG 168

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              D  V NVLI  Y  C       R++F+++  +++ISW ++IS Y Q        KLF
Sbjct: 169 TEMDVSVVNVLIDFYTKC-NRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLF 227

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
             M R G+    KP+ +   S++T+  S  L      +Q+ A   KA L S+ +V + L+
Sbjct: 228 GEMNRLGW----KPDGFACTSVLTSCGS--LEALEQGRQVHAYTIKANLESNEFVKNGLI 281

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------ 274
             +A+      A+K+F+ M ++NV+S N ++EG                           
Sbjct: 282 DMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLL 341

Query: 275 -----------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                             K++HG +I+ G+   +  G+ L+++Y+KC  + D+R VF  M
Sbjct: 342 TFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEM 401

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             KD V WN M  G  Q+   EEA+  +  ++      + F+  + +++ ++L  +  GQ
Sbjct: 402 NEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQ 461

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           Q H + +K+GLD    V+NAL+ +YA  G +    K+F      D V WNS+I   A   
Sbjct: 462 QFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHA-QH 520

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
               EA+  + +M + G  PN VTF+ +L+A S     + G      +  + +   T   
Sbjct: 521 GEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIKPGTEHY 580

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             ++S  G+ G++ + ++   +M      + W S++S 
Sbjct: 581 ACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSA 618



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 178/622 (28%), Positives = 302/622 (48%), Gaps = 66/622 (10%)

Query: 64  KGMSNEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
           +G S EA  +F ++ R +G   N + L SV+RAC + G    + G Q+H  V++S    D
Sbjct: 14  EGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGV--VEKGAQLHGFVVRSGFDQD 71

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V   LI  Y S     + AR +F+++  +  ++W +II+ Y++ G +    +LF++M+
Sbjct: 72  VYVGTSLIDFY-SKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMR 130

Query: 183 REGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
                 ++ P+ Y   S+++A +    L G    +QI A V + G   D+ V + L+  +
Sbjct: 131 ET----NVVPDRYVVSSVLSACSMLEFLEGG---KQIHAYVLRRGTEMDVSVVNVLIDFY 183

Query: 242 ARLGNFYYARKIFEQMIQKNVVS-----------------------MN------------ 266
            +       RK+F+QM+ KN++S                       MN            
Sbjct: 184 TKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACT 243

Query: 267 ------GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                 G +E   +G++VH Y I++ L     V NGL++MYAK   + D++ VF  M  +
Sbjct: 244 SVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQ 303

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           + +S+N MI G        EA+  F  MR      S  + +S L   ASL  + L +QIH
Sbjct: 304 NVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIH 363

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
           G  +K G+  D+   +AL+ +Y+   Y+     VF  M E D V WN++   F  ++ L 
Sbjct: 364 GLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMF--FGYTQHLE 421

Query: 441 S-EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
           + EA+K Y  ++ +   PN  TF  ++ AAS+ +  + G Q H Q++K  +     + NA
Sbjct: 422 NEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNA 481

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  Y KCG +++  K+F   S  RD V WNSMIS +  +    +A+ +   MM+ G + 
Sbjct: 482 LVDMYAKCGSIEEARKMF-NSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQP 540

Query: 560 DHFTFATVLSACASVATLERGME----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           ++ TF  VLSAC+    +E G+     +   G++   E      + +V +  + G++  A
Sbjct: 541 NYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIKPGTEH----YACVVSLLGRSGKLFEA 596

Query: 616 SRFFDLMPVRN-VYSWNSMISG 636
             F + MP+      W S++S 
Sbjct: 597 KEFIEKMPIEPAAIVWRSLLSA 618



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 190/366 (51%), Gaps = 12/366 (3%)

Query: 332 LDQNGCYEEAIMNFCAM-RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           ++  G  EEA+M F  + R+ G   + F L S + +C  LG +  G Q+HG  ++ G D 
Sbjct: 11  MEDEGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQ 70

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD-SEALVSEAVKYYLD 449
           DV V  +L+  Y+  G +     VF  + E   V+W ++I  +     + VS  ++ +  
Sbjct: 71  DVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVS--LELFAQ 128

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           MR     P+     ++L+A S     + G Q+HA V++     + ++ N L+  Y KC  
Sbjct: 129 MRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNR 188

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           +    K+F +M   ++ +SW +MISGY+ N    +AM L   M + G + D F   +VL+
Sbjct: 189 VKAGRKLFDQMV-VKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLT 247

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           +C S+  LE+G +VHA  ++A LE +  + + L+DMY+K   +  A + FD+M  +NV S
Sbjct: 248 SCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVIS 307

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           +N+MI GY+      +AL LF +M++    P  +TFV +L        V       +   
Sbjct: 308 YNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLG-------VSASLFALELSK 360

Query: 690 QVYGLI 695
           Q++GLI
Sbjct: 361 QIHGLI 366



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 197/422 (46%), Gaps = 33/422 (7%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   +K     + F+ N LI++Y +   L  A K+FD M ++N +S+  ++ GY+ +   
Sbjct: 262 HAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKL 321

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGM----QVHCLVLKSNQTFDG 123
           +EA ++F EM    F  +     S+L      G S   F +    Q+H L++K   + D 
Sbjct: 322 SEALELFHEMRVRLFPPSLLTFVSLL------GVSASLFALELSKQIHGLIIKXGVSLDL 375

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
              + LI +Y  C    D AR +FEE+  +D++ WN++   Y+Q  +     KL+S +Q 
Sbjct: 376 FAGSALIDVYSKCSYVKD-ARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQF 434

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
                  KPNE+TF +LITAA  S L+     QQ    + K GL    +V +ALV  +A+
Sbjct: 435 S----RQKPNEFTFAALITAA--SNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAK 488

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYL------IRSGLFDMVAVGNGL 297
            G+   ARK+F   I ++VV  N ++    +  E    L      ++ G+         +
Sbjct: 489 CGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAV 548

Query: 298 VNMYAKCGTIDDSRSVFRFMIG----KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
           ++  +  G ++D  + F  M G      +  +  ++S L ++G   EA   F  + +  +
Sbjct: 549 LSACSHAGXVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEA-KEF--IEKMPI 605

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCL 412
             +     S LS+C   G + LG+  +   + +  D   S S  LLS ++A  G  +   
Sbjct: 606 EPAAIVWRSLLSACRIAGNVELGK--YAAEMAISTDPKDSGSYILLSNIFASKGMWADVK 663

Query: 413 KV 414
           KV
Sbjct: 664 KV 665



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 99/192 (51%), Gaps = 4/192 (2%)

Query: 548 LVWFMMQR--GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
           +V+  +QR  G+  + F  A+V+ AC  +  +E+G ++H   VR+  + DV +G++L+D 
Sbjct: 22  MVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDF 81

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
           YSK G I+ A   FD +  +   +W ++I+GY + G    +L LF+QM+    +PD    
Sbjct: 82  YSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVV 141

Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
             VLSACS    + EG K   +     G    +   + ++D   +   +    +  ++M 
Sbjct: 142 SSVLSACSMLEFL-EGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQM- 199

Query: 726 ITPNSLIWRTVL 737
           +  N + W T++
Sbjct: 200 VVKNIISWTTMI 211


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 226/574 (39%), Positives = 359/574 (62%), Gaps = 8/574 (1%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S +++CA    +   + IH           V + N+L+ LY   G ++   +VF  MP  
Sbjct: 69  SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D  SW S+I  +A ++ +  EA+     M R  + PNG TF ++L AA + +   +G Q+
Sbjct: 129 DMCSWTSLIAGYAQND-MPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQI 187

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           HA  +KY+  ++  + +ALL  Y +CG MD    +F ++ E ++ VSWN++I+G+     
Sbjct: 188 HALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQL-ESKNGVSWNALIAGFARKGD 246

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
               + +   M + G    HFT+++V SA A +  LE+G  VHA  +++       +G+ 
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNT 306

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           ++DMY+K G +  A + FD +  ++V +WNSM++ +A++G G +A+T F +M+  G   +
Sbjct: 307 ILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLN 366

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            +TF+ +L+ACSH GLV EG ++F  M + Y L P+++ +  +VDLLGRAG L+    FI
Sbjct: 367 QITFLSILTACSHGGLVKEGKQYFDMMKE-YNLEPEIDHYVTVVDLLGRAGLLNDALVFI 425

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
            KMP+ P + +W  +LG+C R + +  ++G+ AA+ +FE++P +    VLL N+YAS G+
Sbjct: 426 FKMPMKPTAAVWGALLGSC-RMH-KNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQ 483

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           W+  A+ RK MK   VKKE  CSWV +++ VH+FVA D++HP  + IY+K +E++ ++R 
Sbjct: 484 WDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRK 543

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKL--PIRIMKNLRVCGDCHS 899
           AGYVP T + L  ++ + ++  + YHSEKIA+AF L  N  L   IRIMKN+R+CGDCHS
Sbjct: 544 AGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALI-NMPLGATIRIMKNIRICGDCHS 602

Query: 900 AFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
           AF++ISK+  REIV+RD+NRFHHF+ G CSCGDY
Sbjct: 603 AFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDY 636



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 180/370 (48%), Gaps = 9/370 (2%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            + +H +L  S     V + N L+++Y KCG + D+R VF  M  +D  SW ++I+G  Q
Sbjct: 83  ARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQ 142

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N   +EA+     M R     + F+  S L +  +     +G+QIH   +K     DV V
Sbjct: 143 NDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYV 202

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA---DSEALVSEAVKYYLDMR 451
            +ALL +YA  G +   + VF  +   + VSWN++I  FA   D E      +  + +M+
Sbjct: 203 GSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET----TLLMFAEMQ 258

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
           R G+     T+ ++ +A +     + G  VHA +IK        + N +L  Y K G M 
Sbjct: 259 RNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMI 318

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
           D  K+F R+ +++D V+WNSM++ +    L  +A+     M + G  L+  TF ++L+AC
Sbjct: 319 DARKVFDRV-DKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTAC 377

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-W 630
           +    ++ G +         LE ++     +VD+  + G ++ A  F   MP++   + W
Sbjct: 378 SHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVW 437

Query: 631 NSMISGYARH 640
            +++     H
Sbjct: 438 GALLGSCRMH 447



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 208/434 (47%), Gaps = 76/434 (17%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           DA+  H  +    FA  VFL N+LI++Y + G +A A ++FD MP R+  SW  +++GY 
Sbjct: 82  DARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYA 141

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
              M +EA  +   M+R  F  N +   S+L+A      SG   G Q+H L +K +   D
Sbjct: 142 QNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSG--IGEQIHALTVKYDWHDD 199

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V + L+ MY  C    D A  +F+++E+++ +SWN++I+ ++++GD  +   +F+ MQ
Sbjct: 200 VYVGSALLDMYARC-GRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQ 258

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVGSALVS 239
           R GF    +   +T+ S+ +A     ++G   L+Q   + A + K+G     +VG+ ++ 
Sbjct: 259 RNGF----EATHFTYSSVFSA-----IAGIGALEQGKWVHAHMIKSGERLSAFVGNTILD 309

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVN 299
            +A+ G+   ARK+F+++ +K+VV+ N ++                              
Sbjct: 310 MYAKSGSMIDARKVFDRVDKKDVVTWNSMLTA---------------------------- 341

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
            +A+ G            +G+++V+                   +F  MR+ G+  +  +
Sbjct: 342 -FAQYG------------LGREAVT-------------------HFEEMRKCGVHLNQIT 369

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
            +S L++C+  G +  G+Q      +  L+ ++     ++ L   AG L+  L   F MP
Sbjct: 370 FLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMP 429

Query: 420 EHDQVS-WNSVIGA 432
                + W +++G+
Sbjct: 430 MKPTAAVWGALLGS 443



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 2/187 (1%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           + ++++ACA   +L+    +HA    +     V + ++L+ +Y KCG +  A R FD MP
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            R++ SW S+I+GYA++   D+AL L   M      P+  TF  +L A   +     G +
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIG-E 185

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
              +++  Y     +   S ++D+  R G +D      +++  + N + W  ++    R 
Sbjct: 186 QIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE-SKNGVSWNALIAGFARK 244

Query: 744 NCRKTEL 750
              +T L
Sbjct: 245 GDGETTL 251



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 12/121 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K G     F+ NT++++Y + G +  A K+FD +  ++ V+W  +++ +
Sbjct: 283 EQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAF 342

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G+  EA   F+EM + G  LN+    S+L AC   G            LV +  Q F
Sbjct: 343 AQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGG------------LVKEGKQYF 390

Query: 122 D 122
           D
Sbjct: 391 D 391


>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 251/664 (37%), Positives = 373/664 (56%), Gaps = 54/664 (8%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKC--GTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           ++H  ++RSG F    V   L+  YA       D +  VF  +   +   WN +I G  +
Sbjct: 51  QLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N    +AI  +  M  D    + F+  +   +C+    +  G+QIHG  +K G+ SDV +
Sbjct: 111 NNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            +A + +YA  G L    K+F+   E D V WN++I                        
Sbjct: 170 KSAGIQMYASFGRLEDARKMFY-SGESDVVCWNTMI------------------------ 204

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
              +G     +L AA           + AQ+   N+ +   + N L     K G + D  
Sbjct: 205 ---DGYLKCGVLEAAKG---------LFAQMPVKNIGSWNVMINGL----AKGGNLGDAR 248

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           K+F  MSER DE+SW+SM+ GYI      +A+ +   M +   R   F  ++VL+AC+++
Sbjct: 249 KLFDEMSER-DEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNI 307

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
             +++G  VHA   R  ++ D V+G+AL+DMY+KCGR+D     F+ M  R +++WN+MI
Sbjct: 308 GAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMI 367

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
            G A HG  + AL LFS+++     P+ +T VGVL+AC+HAG VD+G + F++M + YG+
Sbjct: 368 GGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGV 427

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRK 753
            P+LE + CMVDLLGR+G   + E+ IN MP+ PN+ +W  +LGAC    N    +L  +
Sbjct: 428 DPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNF---DLAER 484

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
              +L E+EPQN+  YVLL+N+YA  G+++DV+K RK MK   +K   G S V +   VH
Sbjct: 485 VGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVH 544

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
            F  GD SHP+   IY KLK + ++++ AG+ P T   LFD++ E KE  V+YHSEK+A+
Sbjct: 545 EFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAI 604

Query: 874 AFVLTRNSKLP---IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           AF L   + LP   I I+KNLRVC DCHSA K IS+I  REI++RD  R+HHF +G CSC
Sbjct: 605 AFGLI--NTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSC 662

Query: 931 GDYW 934
            D+W
Sbjct: 663 KDFW 666



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 208/450 (46%), Gaps = 19/450 (4%)

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC-LESTDCARRIFEE 149
           +VL+       +  ++  Q+H LVL+S    D  VS  L+  Y +    + D A ++F  
Sbjct: 33  TVLKLFDSKSITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSS 92

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
           I   ++  WN +I    +          + RM  +      +PN++T+ +L  A   SV 
Sbjct: 93  IPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-----RPNKFTYPTLFKAC--SVA 145

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
                 +QI   V K G+ SD+++ SA +  +A  G    ARK+F    + +VV  N ++
Sbjct: 146 QAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSG-ESDVVCWNTMI 204

Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVGN-----GLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
           +G  K   +       GLF  + V N      ++N  AK G + D+R +F  M  +D +S
Sbjct: 205 DGYLKCGVLEA---AKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEIS 261

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W++M+ G    G Y+EA+  F  M+R+      F L S L++C+++G I  G+ +H    
Sbjct: 262 WSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLK 321

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           +  +  D  +  ALL +YA  G L    +VF  M E +  +WN++IG  A       +A+
Sbjct: 322 RNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLA-IHGRAEDAL 380

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSC 503
           + +  ++     PNG+T + +L A +       G ++   + + Y V  E      ++  
Sbjct: 381 ELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDL 440

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            G+ G   + E +   M  + +   W +++
Sbjct: 441 LGRSGLFSEAEDLINSMPMKPNAAVWGALL 470



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 154/330 (46%), Gaps = 23/330 (6%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N +IN   + G+L  A KLFDEM +R+ +SW+ +V GY   G   EA ++F++M R    
Sbjct: 232 NVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETR 291

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
             R+ L SVL AC   G      G  VH  + +++   D ++   L+ MY  C    D  
Sbjct: 292 PGRFILSSVLAACSNIG--AIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKC-GRLDMG 348

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
             +FEE++ R++ +WN++I   +  G      +LFS++Q EG    +KPN  T   ++TA
Sbjct: 349 WEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQ-EG---RMKPNGITLVGVLTA 404

Query: 204 -AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
            A++  +     + Q   M +  G+  +L     +V    R G F  A  +   M  K  
Sbjct: 405 CAHAGFVDKGLRIFQ--TMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPN 462

Query: 263 VSMNGLMEGRRKGKEVHGYL-----IRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSV 313
            ++ G + G  +   +HG       +   L ++    +G    L N+YAK G  DD   +
Sbjct: 463 AAVWGALLGACR---IHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKI 519

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
            + M  +  +     +S +D NG   E  M
Sbjct: 520 RKLMKNR-GIKTVPGVSIVDLNGTVHEFKM 548



 Score = 46.2 bits (108), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 43/93 (46%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  + ++    D  L   L+++Y + G L    ++F+EM +R   +W  ++ G    G +
Sbjct: 317 HAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRA 376

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            +A ++F ++       N   L  VL AC   G
Sbjct: 377 EDALELFSKLQEGRMKPNGITLVGVLTACAHAG 409


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/697 (34%), Positives = 386/697 (55%), Gaps = 43/697 (6%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS-WNTMISGLDQN 335
           ++H  +I  GL   V     L+  YA       S SVFR     ++V  WN++I  L  N
Sbjct: 34  KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G + EA+  +   +R  L    ++  S +++CA L    + + IH   L +G  SD+ + 
Sbjct: 94  GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIG 153

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI------GAFADSEALVSEAVKYYLD 449
           NAL+ +Y     L +  KVF  MP  D VSWNS+I      G + ++  +  +++K +++
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFME 213

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M    + P+ +T  +IL A       + G  VH  +I      +TT  N L++ Y KCG 
Sbjct: 214 MVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGN 272

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYI-------------------------------H 538
           +   +++F+ M + +D VSWNSMI+ YI                               H
Sbjct: 273 LLASQEVFSGM-KCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVH 331

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
           +E     + ++  M   G   D  T  ++L  C+ +A   +G E+H C  +  LE DV +
Sbjct: 332 SEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPV 391

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
           G+ L++MYSKCG +  + + F LM  ++V +W ++IS    +G G KA+  F +M+  G 
Sbjct: 392 GNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGI 451

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
           +PDHV FV ++ ACSH+GLV+EG  +F  M + Y + P++E ++C+VDLL R+  LDK E
Sbjct: 452 VPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAE 511

Query: 719 EFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYAS 778
           +FI  MP+ P+S IW  +L AC  +    TE+  + +  + E+ P +   YVL++N+YA+
Sbjct: 512 DFILSMPLKPDSSIWGALLSACRMSG--DTEIAERVSERIIELNPDDTGYYVLVSNIYAA 569

Query: 779 GGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQK 838
            GKW+ V   RK++K   +KK+ GCSW+ +++ V+VF  G +   + + + + L  L   
Sbjct: 570 LGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGL 629

Query: 839 MRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDC 897
           M   GY+   +F L D++ + K D++  HSE++A+AF +L      P+++MKNLRVC DC
Sbjct: 630 MAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDC 689

Query: 898 HSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           H+  K+ISKIV RE+++RD+NRFH F DG CSCGDYW
Sbjct: 690 HTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726



 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 142/543 (26%), Positives = 236/543 (43%), Gaps = 59/543 (10%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD-EMPDRNSVSWACIVSGYTHKG 65
            H  I+  G  + V     LI  Y    D  S+  +F    P  N   W  I+   TH G
Sbjct: 35  LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNG 94

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
           + +EA  ++ E  R     + Y   SV+ AC   G   F+    +H  VL      D  +
Sbjct: 95  LFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLLDFEMAKSIHDRVLDMGFGSDLYI 152

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG---DTISVF----KLF 178
            N LI MY       D AR++FEE+  RD++SWNS+IS Y+  G   + + ++    KLF
Sbjct: 153 GNALIDMYCR-FNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLF 211

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
             M  +      KP+  T  S++ A      +  G Y+   ++     +G   D    + 
Sbjct: 212 MEMVNQ-----FKPDLLTITSILQACGHLGDLEFGKYVHDYMIT----SGYECDTTASNI 262

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
           L++ +A+ GN   ++++F  M  K+ VS                              N 
Sbjct: 263 LINMYAKCGNLLASQEVFSGMKCKDSVSW-----------------------------NS 293

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           ++N+Y + G + DS  VF  M  +D ++WNT+I+    +      +     MR +G+   
Sbjct: 294 MINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPD 353

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
             +++S L  C+ L     G++IHG   KLGL+SDV V N L+ +Y+  G L    +VF 
Sbjct: 354 MATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFK 413

Query: 417 LMPEHDQVSWNSVI---GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           LM   D V+W ++I   G + + +    +AV+ + +M  AG  P+ V F+ I+ A S   
Sbjct: 414 LMKTKDVVTWTALISACGMYGEGK----KAVRAFGEMEAAGIVPDHVAFVAIIFACSHSG 469

Query: 474 MGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
           + + G +  H     Y +         ++    +   +D  E     M  + D   W ++
Sbjct: 470 LVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGAL 529

Query: 533 ISG 535
           +S 
Sbjct: 530 LSA 532



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 126/540 (23%), Positives = 237/540 (43%), Gaps = 60/540 (11%)

Query: 145 RIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA 204
           R+  E   + L S  SI    +    T  + KL S +   G  +S+      F + + A 
Sbjct: 5   RVLHECSRQTLFS--SISRALASAATTTQLHKLHSLIITLGLHHSV-----IFSAKLIAK 57

Query: 205 YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM----IQK 260
           Y+     +       ++ + A   +++Y+ ++++      G F  A  ++ +     +Q 
Sbjct: 58  YAHFRDPT----SSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQP 113

Query: 261 NVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
           +  +   ++            K +H  ++  G    + +GN L++MY +   +D +R VF
Sbjct: 114 DTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVF 173

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAI-MNFCAMRRDGLMSSNF-----SLISTLSSCA 368
             M  +D VSWN++ISG + NG + EA+ + + +++    M + F     ++ S L +C 
Sbjct: 174 EEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACG 233

Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
            LG +  G+ +H   +  G + D + SN L+++YA  G L    +VF  M   D VSWNS
Sbjct: 234 HLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNS 293

Query: 429 VI------GAFADS---------------EALVSEAV---------KYYLDMRRAGWSPN 458
           +I      G   DS                 +++  V         +    MR  G +P+
Sbjct: 294 MINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPD 353

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
             T ++IL   S  +  + G ++H  + K  + ++  + N L+  Y KCG + +  ++F 
Sbjct: 354 MATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFK 413

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
            M + +D V+W ++IS         KA+     M   G   DH  F  ++ AC+    +E
Sbjct: 414 LM-KTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVE 472

Query: 579 RGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISG 636
            G+   H       +E  +   + +VD+ S+   +D A  F   MP++   S W +++S 
Sbjct: 473 EGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSA 532



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 154/306 (50%), Gaps = 48/306 (15%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H ++L  GF  D+++ N LI++Y R  DL  A K+F+EMP R+ VSW  ++SGY  
Sbjct: 134 AKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNA 193

Query: 64  KGMSNEA-------CKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLK 116
            G  NEA        K+F EMV   F  +   + S+L+AC   G    +FG  VH  ++ 
Sbjct: 194 NGYWNEALEIYYQSIKLFMEMVNQ-FKPDLLTITSILQACGHLG--DLEFGKYVHDYMIT 250

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR---GDTIS 173
           S    D   SN+LI MY  C  +   ++ +F  ++ +D +SWNS+I+VY Q    GD++ 
Sbjct: 251 SGYECDTTASNILINMYAKC-GNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLK 309

Query: 174 VF----------------------------KLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           VF                            ++ SRM+ EG    + P+  T  S++    
Sbjct: 310 VFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEG----VTPDMATMLSILPVC- 364

Query: 206 SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
            S+L+     ++I   + K GL SD+ VG+ L+  +++ G+   + ++F+ M  K+VV+ 
Sbjct: 365 -SLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTW 423

Query: 266 NGLMEG 271
             L+  
Sbjct: 424 TALISA 429



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 8/175 (4%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM- 622
           F+++  A AS AT  +  ++H+  +   L   V+  + L+  Y+       +   F L  
Sbjct: 16  FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD-EG 681
           P  NVY WNS+I     +G   +AL+L+S+ +     PD  TF  V++AC  AGL+D E 
Sbjct: 76  PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLLDFEM 133

Query: 682 FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP----ITPNSLI 732
            K         G    L   + ++D+  R  +LDK  +   +MP    ++ NSLI
Sbjct: 134 AKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLI 188


>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
 gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
          Length = 677

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 248/661 (37%), Positives = 371/661 (56%), Gaps = 40/661 (6%)

Query: 276 KEVHG-YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           K++H   LI   L    ++G  L+  YA CG    +R +F  +  K+ V +N MI     
Sbjct: 55  KKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVN 114

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG Y++A++ F  M   G    N++    L +C+  G + +G QIHG  +KLGLD ++ +
Sbjct: 115 NGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYI 174

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            N L+S+Y    +L    +V   MP  D VSWNS++  +A +    ++A+K   +M    
Sbjct: 175 GNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQN-GRFNDALKLCREMEDLK 233

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             P+  T  ++L A ++                      T+ +N L             +
Sbjct: 234 LKPDAGTMGSLLPAVTN----------------------TSCDNVLY-----------VK 260

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
            +F ++ E+   +SWN MI+ Y++N +  +A++L   M   G   D  + ++VL AC  +
Sbjct: 261 DMFVKLKEK-SLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDL 319

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
           +    G  +H    R  L  ++++ +AL+DMY+KCG +  A   FD M  R+V SW SMI
Sbjct: 320 SAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMI 379

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
           S Y   G G  A+ LF +M+  G  PD + FV VL+ACSHAGLVDEG   F  M++ YG+
Sbjct: 380 SAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAE-YGI 438

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
            P +E ++CMVDLLGRAG++D+      +MP+ PN  +W ++L AC   +     L   A
Sbjct: 439 TPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIAL--LA 496

Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
           A+ LF++ P+ +  YVLL+N+YA  G+W+DV   R  M    +KK  G S V + D V+ 
Sbjct: 497 ADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYT 556

Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVA 874
           F+AGD+SH +   IY+ L  L  +M++ GY+P+T  AL D+E E KE  ++ HSEK+A+ 
Sbjct: 557 FLAGDQSHTQSKEIYKALGVLVGRMKELGYMPETDSALHDVEEEDKECHLAVHSEKLAIV 616

Query: 875 F-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
           F +L       IRI KN+RVCGDCH A K ISKI  REI++RD++RFHHF DG CSCGDY
Sbjct: 617 FAILNTKPGSTIRITKNIRVCGDCHVATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDY 676

Query: 934 W 934
           W
Sbjct: 677 W 677



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 216/449 (48%), Gaps = 33/449 (7%)

Query: 1   SKDAKLFHLQIL-KHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           +K  K  H +IL       +  L   L+  Y   G+      +FDE+ D+N V +  ++ 
Sbjct: 51  AKTLKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIR 110

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
            Y + G+  +A  +FK M   GF  + Y    VL+AC   G      G+Q+H  V+K   
Sbjct: 111 SYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSG--NLWVGLQIHGAVVKLGL 168

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             +  + N L++MYG C +  D ARR+ +E+  RD++SWNS+++ Y+Q G      KL  
Sbjct: 169 DMNLYIGNGLVSMYGKC-KWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCR 227

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLS-----DLYVG 234
            M+       LKP+  T GSL+ A  ++       ++ +   +K+  L+S      +YV 
Sbjct: 228 EMED----LKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVN 283

Query: 235 SALVSGFARLGNFYYARKIFEQM----IQKNVVSMN------GLMEGRRKGKEVHGYLIR 284
           +A+ +          A  ++ QM    ++ + VS++      G +     G+ +H Y+ R
Sbjct: 284 NAMPNE---------AVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVER 334

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
             L   + + N L++MYAKCG + ++R+VF  M+ +D VSW +MIS    +G  ++A+  
Sbjct: 335 KKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVAL 394

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F  MR  G      + +S L++C+  G +  G+       + G+   +   N ++ L   
Sbjct: 395 FKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGR 454

Query: 405 AGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           AG +     +   MP E ++  W S++ A
Sbjct: 455 AGKIDEAYHLTRQMPMEPNERVWGSLLSA 483



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 195/417 (46%), Gaps = 20/417 (4%)

Query: 129 LIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRY 188
           L+  Y +C E     R IF+EI  ++++ +N +I  Y   G       +F  M  +GF  
Sbjct: 77  LMRAYAACGEPC-YTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFY- 134

Query: 189 SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
              P+ YT+  ++ A   SV    ++  QI   V K GL  +LY+G+ LVS + +     
Sbjct: 135 ---PDNYTYPCVLKAC--SVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLD 189

Query: 249 YARKIFEQMIQKNVVSMNGLMEGRRKG----------KEVHGYLIRSGLFDMVAVGNGLV 298
            AR++ ++M  +++VS N ++ G  +           +E+    ++     M ++   + 
Sbjct: 190 AARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVT 249

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
           N    C  +   + +F  +  K  +SWN MI+    N    EA+  +  M+  G+     
Sbjct: 250 N--TSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAV 307

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           S+ S L +C  L   +LG++IH    +  L  ++ + NAL+ +YA  G L     VF  M
Sbjct: 308 SISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQM 367

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
              D VSW S+I A+  S     +AV  +  MR +G++P+ + F+++LAA S   +   G
Sbjct: 368 MFRDVVSWTSMISAYGMS-GQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEG 426

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
                 + +Y +       N ++   G+ G++D+   +  +M    +E  W S++S 
Sbjct: 427 RYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSA 483


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 263/794 (33%), Positives = 418/794 (52%), Gaps = 55/794 (6%)

Query: 112 CLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDT 171
           C V       D +  N +I+ Y SC E  D AR+ F E+  RD++SWNS+IS + Q G+ 
Sbjct: 104 CKVFDKMYLRDVVSYNSIISGYASCGE-MDIARKFFYEMPERDVVSWNSVISGFLQNGEC 162

Query: 172 ISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDL 231
                +F  M R G  +    +  +   ++ A     L    +  Q+  +V K G   D+
Sbjct: 163 RKSIDVFLEMGRCGVGF----DRASLAVVLKAC--GALEECDMGVQVHGLVVKFGFDCDV 216

Query: 232 YVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-------------------- 271
             GSAL+  +A+      +  +F ++ +KN VS + ++ G                    
Sbjct: 217 VTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGV 276

Query: 272 ---------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDS 310
                                 R GKE+H + ++S     + VG   ++MYAKCG + D+
Sbjct: 277 GVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADA 336

Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
           + V   M      S+N +I G  ++    +A+ +F  + + GL     +L   L++CAS+
Sbjct: 337 QKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASI 396

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
              + G+Q+HG  +K    S++ V+NA+L +Y     L+    +F +M   D VSWN++I
Sbjct: 397 RGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAII 456

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
            A  +      E + ++  M  +   P+  T+ ++L A +       G ++H ++IK  +
Sbjct: 457 AA-CEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGM 515

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
             ++ +  AL+  Y KCG ++  +KI  R +E++  VSWN++ISG+   +    A     
Sbjct: 516 GFDSFVGAALVDMYCKCGMIEKADKIHDR-TEQKTMVSWNAIISGFSLLQQSEDAHKFFS 574

Query: 551 FMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCG 610
            M++ G   D+FT+A VL  CA++AT+  G ++HA  ++  L+ DV I S LVDMYSKCG
Sbjct: 575 RMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCG 634

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
            +  +   F+  P R+  +WN+M+ GYA HG G++AL LF  M+L    P+H TFV VL 
Sbjct: 635 NMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLR 694

Query: 671 ACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNS 730
           AC+H GLVD+G  +F  M   YGL PQ E +SCMVD+LGR+G +D+    + KMP   ++
Sbjct: 695 ACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADA 754

Query: 731 LIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKAR 789
           +IWR +L  C    N    E+  KA   L +++PQ++   VLL+N+YA  G W +V++ R
Sbjct: 755 VIWRNLLSVCKIHGN---VEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMR 811

Query: 790 KAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTK 849
           K M+  ++KKE GCSW+ +KD VH F+ GD+ HP  + IYEKL  L  +M+  GY+P   
Sbjct: 812 KMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGEMQSVGYIPDCD 871

Query: 850 FALFDLEPESKEDL 863
             L D E E    L
Sbjct: 872 -VLLDEEVEEPAQL 884



 Score =  282 bits (721), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 189/696 (27%), Positives = 334/696 (47%), Gaps = 80/696 (11%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           +  ++    +  DV   N++I+ Y   G++  A K F EMP+R+ VSW  ++SG+   G 
Sbjct: 102 YACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGE 161

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRAC---QECGPSGFKFGMQVHCLVLKSNQTFDG 123
             ++  +F EM R G   +R +L  VL+AC   +EC       G+QVH LV+K     D 
Sbjct: 162 CRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEEC-----DMGVQVHGLVVKFGFDCDV 216

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +  + L+ MY  C +  D +  +F E+  ++ +SW+++I+   Q    +   +LF  MQ 
Sbjct: 217 VTGSALLGMYAKC-KRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQG 275

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G   S    +  + SL  +   + LS   L +++ +   K+   SD+ VG+A +  +A+
Sbjct: 276 VGVGVS----QSIYASLFRSC--AALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAK 329

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGL----------------------------------- 268
            G    A+K+   M + ++ S N +                                   
Sbjct: 330 CGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGA 389

Query: 269 ------MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                 + G  +G++VHG  ++S     + V N +++MY KC  + ++  +F  M  +D+
Sbjct: 390 LNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDA 449

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           VSWN +I+  +QNG  EE + +F +M    +   +F+  S L +CA    +  G +IH  
Sbjct: 450 VSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTR 509

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            +K G+  D  V  AL+ +Y   G + +  K+     +   VSWN++I  F+  +    +
Sbjct: 510 IIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQ-SED 568

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           A K++  M   G +P+  T+  +L   ++ +   LG Q+HAQ+IK  + ++  I + L+ 
Sbjct: 569 AHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVD 628

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            Y KCG M D + +F + +  RD V+WN+M+ GY H+ L  +A+ L   M     + +H 
Sbjct: 629 MYSKCGNMQDSQLMFEK-APNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHA 687

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIG-----------SALVDMYSKCGR 611
           TF +VL ACA +  +++G+            FDV++            S +VD+  + GR
Sbjct: 688 TFVSVLRACAHMGLVDKGLHY----------FDVMLSEYGLDPQSEHYSCMVDILGRSGR 737

Query: 612 IDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKA 646
           ID A      MP   +   W +++S    HG+ + A
Sbjct: 738 IDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVA 773



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 155/576 (26%), Positives = 270/576 (46%), Gaps = 71/576 (12%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG--- 331
           GK+ H  +I  G      V N L+ MY KC  +D +  VF  M  +D VS+N++ISG   
Sbjct: 68  GKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYAS 127

Query: 332 ---LD-------------------------QNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
              +D                         QNG   ++I  F  M R G+     SL   
Sbjct: 128 CGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVV 187

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L +C +L    +G Q+HG  +K G D DV   +ALL +YA    L   L VF  +PE + 
Sbjct: 188 LKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNW 247

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSW+++I     ++  V E ++ + +M+  G   +   + ++  + ++ S  +LG ++H+
Sbjct: 248 VSWSAMIAGCVQNDRNV-EGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHS 306

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
             +K    ++  +  A L  Y KCG M D +K+ + M +   + S+N++I GY  ++   
Sbjct: 307 HALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQ-SYNAIIVGYARSDRGF 365

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +A+     +++ G   D  T +  L+ACAS+     G +VH   V++    ++ + +A++
Sbjct: 366 QALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAIL 425

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           DMY KC  +  AS  FD+M  R+  SWN++I+   ++G+ ++ L  F+ M      PD  
Sbjct: 426 DMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDF 485

Query: 664 TFVGVLSACS-----------HAGLVDE--GFKHF--KSMSQVY---GLIPQLEQF---- 701
           T+  VL AC+           H  ++    GF  F   ++  +Y   G+I + ++     
Sbjct: 486 TYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRT 545

Query: 702 --SCMV---------DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
               MV          LL ++ +  K    + +M + P++  +  VL  C  AN     L
Sbjct: 546 EQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTC--ANLATVGL 603

Query: 751 GRKAANMLFEMEPQNAVNYV--LLANMYASGGKWED 784
           G++    + + E Q+ V Y+   L +MY+  G  +D
Sbjct: 604 GKQIHAQIIKQELQSDV-YICSTLVDMYSKCGNMQD 638



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 214/469 (45%), Gaps = 52/469 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   LK  F  D+ +    +++Y + G +A A K+   MP  +  S+  I+ GY   
Sbjct: 302 KELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARS 361

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
               +A K F+ +++ G   +   L   L AC      G   G QVH L +KS    +  
Sbjct: 362 DRGFQALKSFQLLLKTGLGFDEITLSGALNACASI--RGDLEGRQVHGLAVKSISMSNIC 419

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V+N ++ MYG C    + A  +F+ +E RD +SWN+II+   Q G+       F+ M   
Sbjct: 420 VANAILDMYGKCKALAE-ASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASM--- 475

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                ++P+++T+GS++ A        + +  +I   + K+G+  D +VG+ALV  + + 
Sbjct: 476 -IHSRMEPDDFTYGSVLKACAGRQALNTGM--EIHTRIIKSGMGFDSFVGAALVDMYCKC 532

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRR------------------------------- 273
           G    A KI ++  QK +VS N ++ G                                 
Sbjct: 533 GMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVL 592

Query: 274 ----------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      GK++H  +I+  L   V + + LV+MY+KCG + DS+ +F     +D V
Sbjct: 593 DTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFV 652

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           +WN M+ G   +G  EEA+  F +M+   +  ++ + +S L +CA +G +  G       
Sbjct: 653 TWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVM 712

Query: 384 L-KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI 430
           L + GLD      + ++ +   +G +   L +   MP E D V W +++
Sbjct: 713 LSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLL 761



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 203/435 (46%), Gaps = 45/435 (10%)

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSW 426
           C+    +  G+Q H   +  G +    VSN L+ +Y    YL    KVF  M   D VS+
Sbjct: 59  CSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSY 118

Query: 427 NSVIGAFADS---------------------EALVS---------EAVKYYLDMRRAGWS 456
           NS+I  +A                        +++S         +++  +L+M R G  
Sbjct: 119 NSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVG 178

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
            +  +   +L A  +     +G QVH  V+K+    +    +ALL  Y KC  +DD   +
Sbjct: 179 FDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSV 238

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F+ + E ++ VSW++MI+G + N+   + + L   M   G  +    +A++  +CA+++ 
Sbjct: 239 FSELPE-KNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSA 297

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           L  G E+H+  +++    D+++G+A +DMY+KCGR+  A +    MP  ++ S+N++I G
Sbjct: 298 LRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVG 357

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           YAR   G +AL  F  +   G   D +T  G L+AC+      EG        QV+GL  
Sbjct: 358 YARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEG-------RQVHGLAV 410

Query: 697 QLEQFS------CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
           +    S       ++D+ G+   L +  +  + M    +++ W  ++ AC +    +  L
Sbjct: 411 KSISMSNICVANAILDMYGKCKALAEASDLFDMME-RRDAVSWNAIIAACEQNGNEEETL 469

Query: 751 GRKAANMLFEMEPQN 765
              A+ +   MEP +
Sbjct: 470 AHFASMIHSRMEPDD 484



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 46/224 (20%)

Query: 563 TFATVLSACASVATLERGMEVHA----CGVR---------------------ACLEFD-- 595
           TF+ +   C+   +L  G + HA    CG                       AC  FD  
Sbjct: 51  TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110

Query: 596 ----VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
               VV  ++++  Y+ CG +D A +FF  MP R+V SWNS+ISG+ ++G   K++ +F 
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV----DL 707
           +M   G   D  +   VL AC      D G        QV+GL+ +   F C V     L
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECDMGV-------QVHGLVVKF-GFDCDVVTGSAL 222

Query: 708 LGRAGELDKIEEFINKMPITP--NSLIWRTVLGACCRANCRKTE 749
           LG   +  ++++ ++     P  N + W  ++  C + N R  E
Sbjct: 223 LGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQ-NDRNVE 265


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 259/777 (33%), Positives = 427/777 (54%), Gaps = 57/777 (7%)

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
           VH  ++ S    D  +SN+L+ +Y         AR++FE++  R+L++W++++S  +  G
Sbjct: 66  VHGQIIVSGLELDTYLSNILMNLYSRA-GGMVYARKVFEKMPERNLVTWSTMVSACNHHG 124

Query: 170 ---DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
              +++ VF  F R ++        PNEY   S I A      SG +++ Q+ + + K+ 
Sbjct: 125 FYEESLVVFLDFWRTRKNS------PNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSR 178

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG------------------- 267
              D+YVG+ L+  + + GN  YAR +F+ + +K+ V+                      
Sbjct: 179 FDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFY 238

Query: 268 -LMEGR---------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
            LMEG                        GK++H +++R G     ++ N L++ Y KCG
Sbjct: 239 QLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCG 298

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            +  +  +F  M  K+ +SW T++SG  QN  ++EA+  F +M + GL    F+  S L+
Sbjct: 299 RVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILT 358

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           SCASL  +  G Q+H   +K  L +D  V+N+L+ +YA    L+   KVF +    D V 
Sbjct: 359 SCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVL 418

Query: 426 WNSVIGAFA--DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           +N++I  ++   ++  + +A+  + DMR     P+ +TF+++L A++S +   L  Q+H 
Sbjct: 419 FNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHG 478

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
            + K+ +  +    +AL++ Y  C  + D   +F  M + +D V WNSM SGY+      
Sbjct: 479 LMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEM-KVKDLVIWNSMFSGYVQQSENE 537

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +A+NL   +     R D FTF  +++A  ++A+L+ G E H   ++  LE +  I +AL+
Sbjct: 538 EALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALL 597

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           DMY+KCG  + A + FD    R+V  WNS+IS YA HG G KAL +  +M  +G  P+++
Sbjct: 598 DMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYI 657

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TFVGVLSACSHAGLV++G K F+ M + +G+ P+ E + CMV LLGRAG L++  E I K
Sbjct: 658 TFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNEARELIEK 716

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           MP  P +++WR++L  C +A     EL   AA M    +P+++ ++ LL+N+YAS G W 
Sbjct: 717 MPTKPAAIVWRSLLSGCAKAG--NVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWT 774

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
           D  K R+ MK   V KE G SW+ +   VH+F++ D+SH + + IYE L +L  ++R
Sbjct: 775 DAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 196/685 (28%), Positives = 331/685 (48%), Gaps = 55/685 (8%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H QI+  G   D +L N L+N+Y R G +  A K+F++MP+RN V+W+ +VS   H G  
Sbjct: 67  HGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFY 126

Query: 68  NEACKMFKEMVRA-GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            E+  +F +  R      N Y L S ++AC     SG     Q+   ++KS    D  V 
Sbjct: 127 EESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVG 186

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
            +LI  Y     + D AR +F+ +  +  ++W ++IS   + G +    +LF ++  EG 
Sbjct: 187 TLLIDFYLK-EGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM-EG- 243

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
             ++ P+ Y   ++++A   S+L      +QI A + + G   D  + + L+  + + G 
Sbjct: 244 --NVVPDGYILSTVLSAC--SILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGR 299

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------------- 274
              A K+F+ M  KN++S   L+ G ++                                
Sbjct: 300 VRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTS 359

Query: 275 ---------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    G +VH Y I++ L +   V N L++MYAKC  + ++R VF      D V +
Sbjct: 360 CASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLF 419

Query: 326 NTMISGLDQNGCYEE---AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           N MI G  + G   E   A+  F  MR   +  S  + +S L + ASL  + L +QIHG 
Sbjct: 420 NAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
             K GL+ D+   +AL+++Y++   L     VF  M   D V WNS+   +   ++   E
Sbjct: 480 MFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQ-QSENEE 538

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           A+  +L+++ +   P+  TF++++ AA + +  +LG + H Q++K  +     I NALL 
Sbjct: 539 ALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLD 598

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            Y KCG  +D  K F   +  RD V WNS+IS Y ++    KA+ ++  MM  G   ++ 
Sbjct: 599 MYAKCGSPEDAHKAFDSAAS-RDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYI 657

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           TF  VLSAC+    +E G++     +R  +E +      +V +  + GR++ A    + M
Sbjct: 658 TFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNEARELIEKM 717

Query: 623 PVRN-VYSWNSMISGYARHGHGDKA 646
           P +     W S++SG A+ G+ + A
Sbjct: 718 PTKPAAIVWRSLLSGCAKAGNVELA 742



 Score =  187 bits (475), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 226/478 (47%), Gaps = 54/478 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  IL++G   D  L N LI+ YV+ G + +A KLFD MP++N +SW  ++SGY  
Sbjct: 268 GKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQ 327

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
             +  EA ++F  M + G   + +A  S+L +C        +FG QVH   +K+N   D 
Sbjct: 328 NSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASL--HALEFGTQVHAYTIKANLGNDS 385

Query: 124 LVSNVLIAMYGSCLESTDC---ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            V+N LI MY  C    DC   AR++F+     D++ +N++I  YS+ G    +    + 
Sbjct: 386 YVTNSLIDMYAKC----DCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNI 441

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
                FR  ++P+  TF SL+ A  S+ L+   L +QI  ++ K GL  D++ GSAL++ 
Sbjct: 442 FHDMRFRL-IRPSLLTFVSLLRA--SASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAV 498

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------- 274
           ++       +R +F++M  K++V  N +  G  +                          
Sbjct: 499 YSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTF 558

Query: 275 ---------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                          G+E H  L++ GL     + N L++MYAKCG+ +D+   F     
Sbjct: 559 VDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAAS 618

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           +D V WN++IS    +G   +A+     M  +G+  +  + +  LS+C+  G +  G + 
Sbjct: 619 RDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQ 678

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD-QVSWNSVIGAFADS 436
               L+ G++ +      ++SL   AG L+   ++   MP     + W S++   A +
Sbjct: 679 FELMLRFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKA 736


>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
 gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 284/848 (33%), Positives = 444/848 (52%), Gaps = 59/848 (6%)

Query: 2   KDAKLFHLQILKHG-FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           ++ K+ H   LK      + F+ N+L+  Y +   +  A +LFD+ P  N +SW  ++SG
Sbjct: 62  RNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISG 121

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
                   ++ + F +M  +GF  N++  GSVL AC   G     +G  V+ L LK+   
Sbjct: 122 CNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSP--LYGELVYSLALKNGFF 179

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            +G V   +I ++   L S + A R+F+++   +++ WN+IIS   +  +      LF +
Sbjct: 180 SNGYVRAGMIDLFAK-LCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQ 238

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M    F     PN +TF S++TA   + L      + +   V K G   D++VG+A++  
Sbjct: 239 MCCRFFM----PNSFTFSSILTAC--AALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDL 292

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRKGKEV----- 278
           +A+  +   A K F +M  +NVVS   ++ G                 R+ G+++     
Sbjct: 293 YAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTI 352

Query: 279 -------------------HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                              H ++ ++G +    V + L+NMY+K G +D S  VFR M  
Sbjct: 353 TSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMES 412

Query: 320 -KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            K+   W  MIS   Q+G    A+  F  M ++GL    F   S LS   SL    LG+ 
Sbjct: 413 TKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLS---LGRL 469

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           IH   LK+GL +D+SV ++L ++Y+  G L     VF  MP+ D VSW S+I  F++ + 
Sbjct: 470 IHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDH 529

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
              +AV+ + +M      P+ +T    L A S+    + G +VH   ++  V  E  +  
Sbjct: 530 -AEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGG 588

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
           AL++ Y KCG +    ++F  M  ++D+ S +S++SGY  N  +  A+ L   +      
Sbjct: 589 ALVNMYSKCGAIVLARRVF-DMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLW 647

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
           +D FT ++V+ A A + +L+ G ++HAC  +  L  +V +GS+LV MYSKCG ID   + 
Sbjct: 648 IDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKV 707

Query: 619 FDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLV 678
           F+ +   ++ SW +MI  YA+HG G +AL ++  M+ +G  PD VTFVGVLSACSH G+V
Sbjct: 708 FEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMV 767

Query: 679 DEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
           +EG+ H  SM++ YG+ P    ++CMVDLLGR+G L + E FIN MPI P++L+W  +L 
Sbjct: 768 EEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLA 827

Query: 739 ACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVK 798
           AC        ELGR AA  + E+EP  A  YV L+N+ A  G WEDV K R  M+   VK
Sbjct: 828 ACKVHG--DIELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTGVK 885

Query: 799 KEAGCSWV 806
           KE G S V
Sbjct: 886 KEPGWSSV 893


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 267/817 (32%), Positives = 433/817 (52%), Gaps = 76/817 (9%)

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  ++N++I MYG C +S + AR++F+ I+ R+  SW+ ++  Y Q     ++++    +
Sbjct: 1   DTFLANMIIQMYGKC-KSPEDARQVFDRIKQRNAFSWSILVECYVQN----AMYQEALEV 55

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            +E  R  +  + YT                  L  +LA   K   L D+  G       
Sbjct: 56  YKEMVRKEISIDAYT------------------LSSVLAACTK---LLDVEEG------- 87

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
                         +M+Q             RK +E+       G    V V   L++++
Sbjct: 88  --------------RMVQ-------------RKAEEL-------GFEKDVVVATSLIHLF 113

Query: 302 AKCGTIDDSRSVFRFMIG-KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           AKCG ++++ SVFR M   +D +S   MI    ++G  + A+  +  MR  GL    F+ 
Sbjct: 114 AKCGCLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTY 173

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
            + L +C+S  +++ G+ IH   L+     ++SV NAL+++YA  G L     +F  M  
Sbjct: 174 AAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDV 233

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            D VSWN++I A+        +A   +  M   G +P+  TF +IL A +S    + G  
Sbjct: 234 KDVVSWNAMIAAYT-LYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRM 292

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +H ++       +  ++N L+S + +CG ++   + F  + E+++  +WN+M++ Y   +
Sbjct: 293 LHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSI-EKKELGAWNTMLAAYAQFD 351

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
               A+ L   M+  G   D FTF++V+ +CAS+  L  G  +H C      E DV++G+
Sbjct: 352 KGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGT 411

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           ALV+MY+KCG +  A + FD +  ++V SW++MI+  A+HGH ++AL L   M L G   
Sbjct: 412 ALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQ 471

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           + VT   VL ACSH G + EG  +F  +SQ +G+    E     +DLLGRAG L + E  
Sbjct: 472 NEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHV 531

Query: 721 INKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASG 779
           ++ MP   + +   T+LG C    + R+   G+     +  +EP+N  +YVLL NMYA+ 
Sbjct: 532 LHTMPFKVSFVALVTLLGGCKVHGDVRR---GKALTKRIVALEPENPGSYVLLNNMYAAA 588

Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
           G+W+DVAK R+ M++  VK++ GCS +  +D ++ F  GD S+P    I  +L+ L  +M
Sbjct: 589 GRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRM 648

Query: 840 R-DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDC 897
           + + GYVP T+    D+  + KE+L+ +HSEK+A+ F ++T      +RI+KNLRVC DC
Sbjct: 649 KEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDC 708

Query: 898 HSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           H+  K  SKI GR I++RD  RFHHF  G CSCGDYW
Sbjct: 709 HTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 745



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 230/497 (46%), Gaps = 58/497 (11%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D FL N +I +Y +      A ++FD +  RN+ SW+ +V  Y    M  EA +++KEMV
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS--C 136
           R    ++ Y L SVL AC +      + G  V     +     D +V+  LI ++    C
Sbjct: 61  RKEISIDAYTLSSVLAACTKL--LDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGC 118

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
           LE  +   R    +  RD+IS  ++I  Y + G        + +M+ +G    L+P+ +T
Sbjct: 119 LEEAESVFRSMGAM--RDIISVTAMIGAYVRHGKNDLALDTYWKMRSQG----LEPDAFT 172

Query: 197 FGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
           + +++ A  S   +L G ++ + IL    ++    ++ V +AL++ +A+ G+   ++ +F
Sbjct: 173 YAAILGACSSPDFLLDGKHIHKHIL----ESKHFGNISVRNALITMYAKCGSLKDSKSLF 228

Query: 255 EQMIQKNVVSMNGLME-----GRRK----------------------------------- 274
             M  K+VVS N ++      G  K                                   
Sbjct: 229 LTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLE 288

Query: 275 -GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
            G+ +H  +   G     A+ N L++M+ +CG+++ +R  F  +  K+  +WNTM++   
Sbjct: 289 DGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYA 348

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           Q    ++A+  +  M  +G     F+  S + SCASLG +  G+ IH      G + DV 
Sbjct: 349 QFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVI 408

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           +  AL+++YA  G L+   K F  +   D VSW+++I A A       EA++    M   
Sbjct: 409 LGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASA-QHGHAEEALELSHLMNLQ 467

Query: 454 GWSPNGVTFINILAAAS 470
           G + N VT  ++L A S
Sbjct: 468 GIAQNEVTASSVLHACS 484



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 132/269 (49%), Gaps = 13/269 (4%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D K  H  IL+     ++ + N LI +Y + G L  +  LF  M  ++ VSW  +++ YT
Sbjct: 188 DGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYT 247

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G   +A  +F  M   G   + Y   S+L AC    P   + G  +H  +       D
Sbjct: 248 LYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGAC--ASPKRLEDGRMLHVRITARGFDRD 305

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             + N LI+M+  C  S + ARR F  IE ++L +WN++++ Y+Q         L+  M 
Sbjct: 306 FAMQNNLISMFTRC-GSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNML 364

Query: 183 REGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
            EGF     P+ +TF S++   A+  ++  G ++ +         G   D+ +G+ALV+ 
Sbjct: 365 LEGF----TPDRFTFSSVVDSCASLGALREGKFIHE----CSTSCGFEKDVILGTALVNM 416

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLM 269
           +A+ G+   A+K F+ +  K+VVS + ++
Sbjct: 417 YAKCGSLADAKKSFDGISNKDVVSWSAMI 445



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/353 (24%), Positives = 150/353 (42%), Gaps = 25/353 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +D ++ H++I   GF  D  + N LI+++ R G L SA + F  +  +   +W  +++ Y
Sbjct: 288 EDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAY 347

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                  +A  ++K M+  GF  +R+   SV+ +C   G    + G  +H          
Sbjct: 348 AQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLG--ALREGKFIHECSTSCGFEK 405

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D ++   L+ MY  C    D A++ F+ I  +D++SW+++I+  +Q G      +L   M
Sbjct: 406 DVILGTALVNMYAKCGSLAD-AKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLM 464

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQI---LAMVKKAGLLSDLYVGSALV 238
             +G    +  NE T  S++ A       G  L + I   + + +  G+  D       +
Sbjct: 465 NLQG----IAQNEVTASSVLHACS----HGGRLYEGIDYFMGLSQDFGIERDEENTVGFI 516

Query: 239 SGFARLGNFYYARKIFEQMIQK-NVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG 296
               R G    A  +   M  K + V++  L+ G +  G    G  +   +  +     G
Sbjct: 517 DLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPG 576

Query: 297 ----LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
               L NMYA  G  DD   + R+M  K  V   T  S ++    Y + I  F
Sbjct: 577 SYVLLNNMYAAAGRWDDVAKLRRYM-RKKGVKRQTGCSSIE----YRDKIYEF 624


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 253/667 (37%), Positives = 378/667 (56%), Gaps = 13/667 (1%)

Query: 276 KEVHGYLIRSGLFDMVAVG-NGLVNMYAKCGTIDDSRSVFRFMIGK----DSVSWNTMIS 330
            ++H  LI+SG     A   + L+   A   T+    +V  F +G      +  +N ++ 
Sbjct: 33  PQLHAALIKSGELTGSAKSFHSLLEAAAASPTLL-PYAVSLFRLGPRPPLSTPCYNVLMR 91

Query: 331 GLDQNGCYEEAIMNFCAMRR--DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
                G  E+A+  F  M        +   +    L SC+ +  + +G+ +    +K GL
Sbjct: 92  AFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGL 151

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
            +D  V ++L+ +YA  G ++    VF    E   V WN+++ A+  +   + E V+ + 
Sbjct: 152 VADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWM-EVVEMFK 210

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            M   G + + VT ++++ A       KLG  V   V +  +A    +  AL+  Y KCG
Sbjct: 211 GMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCG 270

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
           E+    ++F  M + RD V+W++MISGY   +   +A+ L   M       +  T  +VL
Sbjct: 271 EIGKARRLFDGM-QSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVL 329

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
           SACA +  LE G  VH+   R  L    ++G+ALVD Y+KCG ID A   F+ MPV+N +
Sbjct: 330 SACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSW 389

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           +W ++I G A +G G +AL LFS M+  G  P  VTF+GVL ACSH+ LV+EG +HF SM
Sbjct: 390 TWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSM 449

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT 748
           ++ YG+ P++E + CMVDLLGRAG +D+  +FI  MPI PN++IWR +L +C  A  R  
Sbjct: 450 ARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSC--AVHRNV 507

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
            +G +A   +  + P ++ +YVLL+N+YAS G+W+D A  RK MK+  ++K  GCS + +
Sbjct: 508 GIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIEL 567

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
              V  F A D  HPE   IY+K++E+  +++ AGYVP T     ++E   KE  VS+HS
Sbjct: 568 DGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREKEVSVSHHS 627

Query: 869 EKIAVAFVLTR-NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGK 927
           EK+A+AF L + +    IR+ KNLRVC DCHSA K ISK+  REIV+RD N FHHF DG 
Sbjct: 628 EKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRNIFHHFKDGT 687

Query: 928 CSCGDYW 934
           CSC DYW
Sbjct: 688 CSCNDYW 694



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 185/382 (48%), Gaps = 15/382 (3%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+ V  Y ++ GL     V + L++MYA CG +  +R VF        V WN +++   +
Sbjct: 139 GRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLK 198

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG + E +  F  M   G+     +L+S +++C  +G   LG+ + G   + GL  +  +
Sbjct: 199 NGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKL 258

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             AL+ +YA  G + +  ++F  M   D V+W+++I  +  ++    EA+  + +M+ A 
Sbjct: 259 VTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQ-CREALGLFSEMQLAR 317

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             PN VT +++L+A +     + G  VH+ V +  ++  T +  AL+  Y KCG +DD  
Sbjct: 318 VEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAV 377

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           + F  M   ++  +W ++I G   N    +A+ L   M + G      TF  VL AC+  
Sbjct: 378 EAFESMPV-KNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHS 436

Query: 575 ATLERGME-----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVY 628
             +E G           G++  +E        +VD+  + G +D A +F   MP+  N  
Sbjct: 437 CLVEEGRRHFDSMARDYGIKPRVEH----YGCMVDLLGRAGLVDEAYQFIRTMPIEPNAV 492

Query: 629 SWNSMISGYARH---GHGDKAL 647
            W +++S  A H   G G++AL
Sbjct: 493 IWRALLSSCAVHRNVGIGEEAL 514



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 160/359 (44%), Gaps = 43/359 (11%)

Query: 218 ILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN----------- 266
           + A   K GL++D +V S+L+  +A  G+   AR +F+   +  VV  N           
Sbjct: 142 VQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGD 201

Query: 267 ---------GLME-----------------GR----RKGKEVHGYLIRSGLFDMVAVGNG 296
                    G++E                 GR    + GK V G++   GL     +   
Sbjct: 202 WMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTA 261

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           L++MYAKCG I  +R +F  M  +D V+W+ MISG  Q     EA+  F  M+   +  +
Sbjct: 262 LMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPN 321

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
           + +++S LS+CA LG +  G+ +H    +  L     +  AL+  YA  G +   ++ F 
Sbjct: 322 DVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFE 381

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            MP  +  +W ++I   A +     EA++ +  MR AG  P  VTFI +L A S   + +
Sbjct: 382 SMPVKNSWTWTALIKGMA-TNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVE 440

Query: 477 LGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            G +    + + Y +         ++   G+ G +D+  +    M    + V W +++S
Sbjct: 441 EGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLS 499



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 183/403 (45%), Gaps = 57/403 (14%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           +K G   D F+ ++LI++Y   GD+A+A  +FD   +   V W  IV+ Y   G   E  
Sbjct: 147 VKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVV 206

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
           +MFK M+  G   +   L SV+ AC   G +  K G  V   V +     +  +   L+ 
Sbjct: 207 EMFKGMLEVGVAFDEVTLVSVVTACGRIGDA--KLGKWVAGHVDEEGLARNPKLVTALMD 264

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY  C E    ARR+F+ +++RD+++W+++IS Y+Q         LFS MQ       ++
Sbjct: 265 MYAKCGEIGK-ARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLA----RVE 319

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           PN+ T  S+++A   +VL      + + + V++  L     +G+ALV  +A+ G    A 
Sbjct: 320 PNDVTMVSVLSAC--AVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAV 377

Query: 252 KIFEQMIQKNVVSMNGLMEG---RRKGKEV---------------------------HGY 281
           + FE M  KN  +   L++G     +G+E                            H  
Sbjct: 378 EAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSC 437

Query: 282 LIRSGL--FDMVAVGNG----------LVNMYAKCGTIDDSRSVFRFM-IGKDSVSWNTM 328
           L+  G   FD +A   G          +V++  + G +D++    R M I  ++V W  +
Sbjct: 438 LVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRAL 497

Query: 329 IS--GLDQN-GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
           +S   + +N G  EEA+    ++      S ++ L+S + + A
Sbjct: 498 LSSCAVHRNVGIGEEALKQIISLNPS--HSGDYVLLSNIYASA 538



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 12/123 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  + +   +    L   L++ Y + G +  A + F+ MP +NS +W  ++ G    
Sbjct: 342 KWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATN 401

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   EA ++F  M  AG          VL AC               CLV +  + FD +
Sbjct: 402 GRGREALELFSSMREAGIEPTDVTFIGVLMACSH------------SCLVEEGRRHFDSM 449

Query: 125 VSN 127
             +
Sbjct: 450 ARD 452


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 252/764 (32%), Positives = 416/764 (54%), Gaps = 60/764 (7%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK-PNEYTFGSLI 201
           A+ +F+ +  RD++SWNS++S Y   G      ++F RM+      SLK P++Y   S++
Sbjct: 91  AQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMR------SLKIPHDYATFSVV 144

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
             A S +      LQ +  +  + G  +D+  GSALV  +++      A +IF +M ++N
Sbjct: 145 LKACSGIEDYGLGLQ-VHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERN 203

Query: 262 VVSMNGLMEGR-----------------------------------------RKGKEVHG 280
           +V  + ++ G                                          + G ++HG
Sbjct: 204 LVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHG 263

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
           + ++S       +G   ++MYAKC  + D+  VF  +      S+N +I G  +     +
Sbjct: 264 HALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLK 323

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A+  F +++R  L     SL   L++C+ +   + G Q+HG  +K GL  ++ V+N +L 
Sbjct: 324 ALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILD 383

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +Y   G L     +F  M   D VSWN++I A   +E +V + +  ++ M R+   P+  
Sbjct: 384 MYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIV-KTLSLFVSMLRSTMEPDDF 442

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           T+ +++ A +       G ++H +++K  +  +  + +AL+  YGKCG + + EKI  R+
Sbjct: 443 TYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRL 502

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
            E +  VSWNS+ISG+   +    A      M++ G   D+FT+ATVL  CA++AT+E G
Sbjct: 503 -EEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELG 561

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
            ++HA  ++  L  DV I S LVDMYSKCG +  +   F+  P R+  +W++MI  YA H
Sbjct: 562 KQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYH 621

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
           GHG++A+ LF +M+L    P+H  F+ VL AC+H G VD+G  +F+ M   YGL P +E 
Sbjct: 622 GHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEH 681

Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR---KTELGRKAANM 757
           +SCMVDLLGR+ ++++  + I  M    + +IWRT+L     +NC+     E+  KA N 
Sbjct: 682 YSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLL-----SNCKMQGNVEVAEKAFNS 736

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           L +++PQ++  YVLLAN+YA+ G W +VAK R  MK  ++KKE GCSW+ ++D VH F+ 
Sbjct: 737 LLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLV 796

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKE 861
           GD++HP  + IYE+   L  +M+ AGYVP    ++ D E E ++
Sbjct: 797 GDKAHPRSEEIYEQTHLLVDEMKWAGYVPDID-SMLDEEVEEQD 839



 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 203/716 (28%), Positives = 339/716 (47%), Gaps = 80/716 (11%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV   NT+I  Y  +G++  A  LFD MP+R+ VSW  ++S Y H G++ ++ ++F  M 
Sbjct: 71  DVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRM- 129

Query: 79  RAGFLLNRYALGS-VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
           R+  + + YA  S VL+AC   G   +  G+QVHCL ++     D +  + L+ MY  C 
Sbjct: 130 RSLKIPHDYATFSVVLKACS--GIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC- 186

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
           +  D A RIF E+  R+L+ W+++I+ Y Q    I   KLF  M + G   S       F
Sbjct: 187 KKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246

Query: 198 GS--------LITAAYSSVLSGSYLLQQI-----LAMVKKAGLLSDLY------------ 232
            S        L T  +   L   +    I     L M  K   +SD +            
Sbjct: 247 RSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQ 306

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN-----------GLMEGRRKGKEVHGY 281
             +A++ G+AR      A +IF Q +Q+  +S +            +++G  +G ++HG 
Sbjct: 307 SYNAIIVGYARQDQGLKALEIF-QSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGL 365

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
            ++ GL   + V N +++MY KCG + ++ ++F  M  +D+VSWN +I+  +QN    + 
Sbjct: 366 AVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKT 425

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +  F +M R  +   +F+  S + +CA    +  G +IHG  +K G+  D  V +AL+ +
Sbjct: 426 LSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDM 485

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y   G L    K+   + E   VSWNS+I  F+ S+     A +Y+  M   G  P+  T
Sbjct: 486 YGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFS-SQKQSENAQRYFSQMLEMGVIPDNFT 544

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           +  +L   ++ +  +LG Q+HAQ++K N+ ++  I + L+  Y KCG M D   +F + +
Sbjct: 545 YATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEK-T 603

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
            +RD V+W++MI  Y ++    +A+ L   M     + +H  F +VL ACA +  +++G+
Sbjct: 604 PKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGL 663

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
                       F ++                     + L P    YS   M+    R  
Sbjct: 664 HY----------FQIM------------------QSHYGLDPHMEHYS--CMVDLLGRSD 693

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
             ++AL L   M  +    D V +  +LS C   G V+   K F S+ Q   L PQ
Sbjct: 694 QVNEALKLIESMHFEA---DDVIWRTLLSNCKMQGNVEVAEKAFNSLLQ---LDPQ 743



 Score =  232 bits (591), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 151/571 (26%), Positives = 279/571 (48%), Gaps = 56/571 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   ++ GF  DV   + L+++Y +   L  A ++F EMP+RN V W+ +++GY      
Sbjct: 161 HCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRF 220

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            E  K+FK+M++ G  +++    SV R+C   G S FK G Q+H   LKS+  +D ++  
Sbjct: 221 IEGLKLFKDMLKVGMGVSQSTYASVFRSC--AGLSAFKLGTQLHGHALKSDFAYDSIIGT 278

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
             + MY  C   +D A ++F  +      S+N+II  Y+++   +   ++F  +QR    
Sbjct: 279 ATLDMYAKCDRMSD-AWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLS 337

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           +    +E +    +TA   SV+ G     Q+  +  K GL  ++ V + ++  + + G  
Sbjct: 338 F----DEISLSGALTAC--SVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGAL 391

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------------- 274
             A  IF+ M +++ VS N ++    +                                 
Sbjct: 392 VEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKAC 451

Query: 275 --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                   G E+HG +++SG+     VG+ LV+MY KCG + ++  +   +  K +VSWN
Sbjct: 452 AGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWN 511

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
           ++ISG       E A   F  M   G++  NF+  + L  CA++  I LG+QIH + LKL
Sbjct: 512 SIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKL 571

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
            L SDV +++ L+ +Y+  G +     +F   P+ D V+W+++I A+A       +A+K 
Sbjct: 572 NLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYA-YHGHGEQAIKL 630

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA-QVIKYNVANETTIEN--ALLSC 503
           + +M+     PN   FI++L A +   MG +   +H  Q+++ +   +  +E+   ++  
Sbjct: 631 FEEMQLLNVKPNHTIFISVLRACA--HMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDL 688

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            G+  ++++  K+   M    D+V W +++S
Sbjct: 689 LGRSDQVNEALKLIESMHFEADDVIWRTLLS 719



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 164/666 (24%), Positives = 305/666 (45%), Gaps = 94/666 (14%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG 275
           +Q  A +     +  +YV + LV  + +  N  YA K+F++M  ++V+S N ++ G    
Sbjct: 26  KQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRMPHRDVISWNTMIFG---- 81

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
                                    YA+ G +  ++S+F  M  +D VSWN+++S    N
Sbjct: 82  -------------------------YAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHN 116

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G   ++I  F  MR   +     +    L +C+ +    LG Q+H   +++G ++DV   
Sbjct: 117 GVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTG 176

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           +AL+ +Y+    L    ++F  MPE + V W++VI  +  ++  + E +K + DM + G 
Sbjct: 177 SALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFI-EGLKLFKDMLKVGM 235

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
             +  T+ ++  + +  S  KLG Q+H   +K + A ++ I  A L  Y KC  M D  K
Sbjct: 236 GVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWK 295

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F  +     + S+N++I GY   +   KA+ +   + +     D  + +  L+AC+ + 
Sbjct: 296 VFNTLPNPPRQ-SYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIK 354

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
               G+++H   V+  L F++ + + ++DMY KCG +  A   FD M  R+  SWN++I+
Sbjct: 355 GHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIA 414

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
            + ++    K L+LF  M      PD  T+  V+ AC+    ++ G        +++G I
Sbjct: 415 AHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGM-------EIHGRI 467

Query: 696 PQ----LEQF--SCMVDLLGRAGEL-------DKIEEFIN-------------------- 722
            +    L+ F  S +VD+ G+ G L       D++EE                       
Sbjct: 468 VKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQ 527

Query: 723 -------KMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV--LLA 773
                  +M + P++  + TVL  C  AN    ELG++    + ++   + V Y+   L 
Sbjct: 528 RYFSQMLEMGVIPDNFTYATVLDVC--ANMATIELGKQIHAQILKLNLHSDV-YIASTLV 584

Query: 774 NMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDL-IYEKL 832
           +MY+  G  +D     + M E   K++   +W  M     +       H E+ + ++E++
Sbjct: 585 DMYSKCGNMQD----SRLMFEKTPKRDY-VTWSAM-----ICAYAYHGHGEQAIKLFEEM 634

Query: 833 KELNQK 838
           + LN K
Sbjct: 635 QLLNVK 640



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 200/415 (48%), Gaps = 33/415 (7%)

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
           +  F+    L  C++L  +  G+Q H + +       + V+N L+  Y  +  ++   KV
Sbjct: 4   TKKFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKV 63

Query: 415 FFLMPEHDQVSWNSVIGAFADS---------------------EALVS---------EAV 444
           F  MP  D +SWN++I  +A+                       +L+S         +++
Sbjct: 64  FDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSI 123

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
           + ++ MR      +  TF  +L A S      LG QVH   I+    N+    +AL+  Y
Sbjct: 124 EIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMY 183

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            KC ++D   +IF  M E R+ V W+++I+GY+ N+   + + L   M++ G  +   T+
Sbjct: 184 SKCKKLDGAFRIFREMPE-RNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTY 242

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
           A+V  +CA ++  + G ++H   +++   +D +IG+A +DMY+KC R+  A + F+ +P 
Sbjct: 243 ASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPN 302

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
               S+N++I GYAR   G KAL +F  ++      D ++  G L+ACS      EG + 
Sbjct: 303 PPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQ- 361

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
              ++   GL   +   + ++D+ G+ G L +     + M    +++ W  ++ A
Sbjct: 362 LHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDME-RRDAVSWNAIIAA 415



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 144/263 (54%), Gaps = 9/263 (3%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K G  +++ + NT++++Y + G L  A  +FD+M  R++VSW  I++ +     
Sbjct: 362 LHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEE 421

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             +   +F  M+R+    + +  GSV++AC   G     +GM++H  ++KS    D  V 
Sbjct: 422 IVKTLSLFVSMLRSTMEPDDFTYGSVVKAC--AGQQALNYGMEIHGRIVKSGMGLDWFVG 479

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L+ MYG C    + A +I + +E +  +SWNSIIS +S +  + +  + FS+M   G 
Sbjct: 480 SALVDMYGKCGMLME-AEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMG- 537

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              + P+ +T+ +++    +  ++   L +QI A + K  L SD+Y+ S LV  +++ GN
Sbjct: 538 ---VIPDNFTYATVLDVCAN--MATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGN 592

Query: 247 FYYARKIFEQMIQKNVVSMNGLM 269
              +R +FE+  +++ V+ + ++
Sbjct: 593 MQDSRLMFEKTPKRDYVTWSAMI 615



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 104/197 (52%), Gaps = 7/197 (3%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H +I+K G   D F+ + L+++Y + G L  A K+ D + ++ +VSW  I+SG++ +  
Sbjct: 463 IHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQ 522

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           S  A + F +M+  G + + +   +VL  C     +  + G Q+H  +LK N   D  ++
Sbjct: 523 SENAQRYFSQMLEMGVIPDNFTYATVLDVC--ANMATIELGKQIHAQILKLNLHSDVYIA 580

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L+ MY  C    D +R +FE+   RD ++W+++I  Y+  G      KLF  MQ    
Sbjct: 581 STLVDMYSKCGNMQD-SRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQ---- 635

Query: 187 RYSLKPNEYTFGSLITA 203
             ++KPN   F S++ A
Sbjct: 636 LLNVKPNHTIFISVLRA 652



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 54/96 (56%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H QILK     DV++ +TL+++Y + G++  +  +F++ P R+ V+W+ ++  Y + 
Sbjct: 562 KQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYH 621

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G   +A K+F+EM       N     SVLRAC   G
Sbjct: 622 GHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMG 657


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 232/572 (40%), Positives = 353/572 (61%), Gaps = 6/572 (1%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L+ C  L  +  G+ IH        + D+ + N +L++YA  G L     +F  MP  D 
Sbjct: 112 LNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDM 171

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSW  +I  ++ S    SEA+  +  M   G+ PN  T  ++L A+ +      G Q+HA
Sbjct: 172 VSWTVLISGYSQS-GQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA 230

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
             +KY       + ++LL  Y +   M + + IF  ++ + + VSWN++I+G+       
Sbjct: 231 FSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-NVVSWNALIAGHARKGEGE 289

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
             M L   M+++G    HFT+++V +ACAS  +LE+G  VHA  +++  +    IG+ L+
Sbjct: 290 HVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLI 349

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           DMY+K G I  A + F  +  +++ SWNS+ISGYA+HG G +AL LF QM      P+ +
Sbjct: 350 DMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEI 409

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TF+ VL+ACSH+GL+DEG  +F+ M + + +  Q+     +VDLLGRAG L++  +FI +
Sbjct: 410 TFLSVLTACSHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEE 468

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           MPI P + +W  +LG+ CR + +  +LG  AA  +FE++P ++  +VLL+N+YAS G+  
Sbjct: 469 MPIKPTAAVWGALLGS-CRMH-KNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLS 526

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
           D AK RK MKE+ VKKE  CSWV +++ VHVFVA D+SHP ++ I    ++++ K+++ G
Sbjct: 527 DAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIG 586

Query: 844 YVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFK 902
           YVP T   LF +  + +E  + YHSEK+A+AF VL     L IRI KN+R+CGDCHSAFK
Sbjct: 587 YVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFK 646

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           F S+++GREI++RD+NRFHHF  G CSC DYW
Sbjct: 647 FASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 206/401 (51%), Gaps = 8/401 (1%)

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
           G+    R ++ +M+ K        +   ++G+ +H ++  S   D + + N ++NMYAKC
Sbjct: 99  GSLEPERTLYSKMLNKCTY-----LRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKC 153

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G++++++ +F  M  KD VSW  +ISG  Q+G   EA+  F  M   G   + F+L S L
Sbjct: 154 GSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLL 213

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +  +      G+Q+H   LK G D +V V ++LL +YA   ++     +F  +   + V
Sbjct: 214 KASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVV 273

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           SWN++I   A  +      ++ +L M R G+ P   T+ ++  A +S    + G  VHA 
Sbjct: 274 SWNALIAGHA-RKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAH 332

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
           VIK        I N L+  Y K G + D +K+F R+  ++D VSWNS+ISGY  + L  +
Sbjct: 333 VIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLV-KQDIVSWNSIISGYAQHGLGAE 391

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
           A+ L   M++   + +  TF +VL+AC+    L+ G        +  +E  V     +VD
Sbjct: 392 ALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVD 451

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYARHGHGD 644
           +  + GR++ A++F + MP++   + W +++     H + D
Sbjct: 452 LLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMD 492



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 155/273 (56%), Gaps = 15/273 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H  I    F  D+ L N ++N+Y + G L  A  LFD+MP ++ VSW  ++SGY
Sbjct: 122 KQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGY 181

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G ++EA  +F +M+  GF  N + L S+L+A    GPS    G Q+H   LK     
Sbjct: 182 SQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA-SGTGPSD-HHGRQLHAFSLKYGYDM 239

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V + L+ MY       + A+ IF  +  ++++SWN++I+ ++++G+   V +LF +M
Sbjct: 240 NVHVGSSLLDMYARWAHMRE-AKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQM 298

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVGSALV 238
            R+GF    +P  +T+ S+ TA  S   SGS  L+Q   + A V K+G     Y+G+ L+
Sbjct: 299 LRQGF----EPTHFTYSSVFTACAS---SGS--LEQGKWVHAHVIKSGGQPIAYIGNTLI 349

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             +A+ G+   A+K+F +++++++VS N ++ G
Sbjct: 350 DMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISG 382



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 168/343 (48%), Gaps = 25/343 (7%)

Query: 214 LLQQILAMVKKAGLLS------------DLYVGSALVSGFARLGNFYYARKIFEQMI--- 258
           LL  IL M  K G L             D+   + L+SG+++ G    A  +F +M+   
Sbjct: 142 LLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLG 201

Query: 259 -QKNVVSMNGLMEGR------RKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDS 310
            Q N  +++ L++          G+++H + ++ G +DM V VG+ L++MYA+   + ++
Sbjct: 202 FQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYG-YDMNVHVGSSLLDMYARWAHMREA 260

Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
           + +F  +  K+ VSWN +I+G  + G  E  +  F  M R G   ++F+  S  ++CAS 
Sbjct: 261 KVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASS 320

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
           G +  G+ +H   +K G      + N L+ +YA +G +    KVF  + + D VSWNS+I
Sbjct: 321 GSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSII 380

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
             +A    L +EA++ +  M +A   PN +TF+++L A S   +   G      + K+ +
Sbjct: 381 SGYAQ-HGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKI 439

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
             +      ++   G+ G +++  K    M  +     W +++
Sbjct: 440 EAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALL 482



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 154/321 (47%), Gaps = 19/321 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H   LK+G+  +V + ++L+++Y R   +  A  +F+ +  +N VSW  +++G+  K
Sbjct: 226 RQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARK 285

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G      ++F +M+R GF    +   SV  AC   G    + G  VH  V+KS       
Sbjct: 286 GEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSG--SLEQGKWVHAHVIKSGGQPIAY 343

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           + N LI MY       D A+++F  +  +D++SWNSIIS Y+Q G      +LF +M   
Sbjct: 344 IGNTLIDMYAKSGSIKD-AKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQM--- 399

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             +  ++PNE TF S++TA   S L   G Y  +    ++KK  + + +     +V    
Sbjct: 400 -LKAKVQPNEITFLSVLTACSHSGLLDEGQYYFE----LMKKHKIEAQVAHHVTVVDLLG 454

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGR-RKGKEVH-GYLIRSGLFDMVAVGNG---- 296
           R G    A K  E+M  K   ++ G + G  R  K +  G      +F++    +G    
Sbjct: 455 RAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVL 514

Query: 297 LVNMYAKCGTIDDSRSVFRFM 317
           L N+YA  G + D+  V + M
Sbjct: 515 LSNIYASAGRLSDAAKVRKMM 535



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 16/228 (7%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           ++ +L+ C  +  L++G  +HA    +  E D+V+ + +++MY+KCG ++ A   FD MP
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            +++ SW  +ISGY++ G   +AL LF +M   G  P+  T   +L A S  G  D   +
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA-SGTGPSDHHGR 226

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
              + S  YG    +   S ++D+  R   + + +   N +    N + W  ++      
Sbjct: 227 QLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLA-AKNVVSWNALIA----G 281

Query: 744 NCRKTELGRKAANMLFEM-----EPQNAVNYVLLANMYASG----GKW 782
           + RK E G     +  +M     EP +     +     +SG    GKW
Sbjct: 282 HARKGE-GEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKW 328



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 54/99 (54%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K G     ++ NTLI++Y + G +  A K+F  +  ++ VSW  I+SGY
Sbjct: 324 EQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGY 383

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G+  EA ++F++M++A    N     SVL AC   G
Sbjct: 384 AQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSG 422


>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Glycine max]
          Length = 673

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/659 (37%), Positives = 368/659 (55%), Gaps = 37/659 (5%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           K VH  +      +  ++G  L+  YA  G    +R+VF  +  ++ + +N MI     N
Sbjct: 52  KNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNN 111

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
             Y++A++ F  M   G    +++    L +C+    + +G Q+HG   K+GLD ++ V 
Sbjct: 112 HLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVG 171

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           N L++LY   G L     V   M   D VSWNS++  +A +     +A+    +M     
Sbjct: 172 NGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQF-DDALDICREMDGVRQ 230

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            P+  T  ++L A ++                      T+ EN L             E+
Sbjct: 231 KPDACTMASLLPAVTN----------------------TSSENVLY-----------VEE 257

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F  + E++  VSWN MIS Y+ N +  K+++L   M +     D  T A+VL AC  ++
Sbjct: 258 MFMNL-EKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLS 316

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            L  G  +H    R  L  ++++ ++L+DMY++CG ++ A R FD M  R+V SW S+IS
Sbjct: 317 ALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLIS 376

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
            Y   G G  A+ LF++M+  G  PD + FV +LSACSH+GL++EG  +FK M+  Y + 
Sbjct: 377 AYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKIT 436

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           P +E F+C+VDLLGR+G +D+    I +MP+ PN  +W  +L +C   +    ++G  AA
Sbjct: 437 PIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYS--NMDIGILAA 494

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
           + L ++ P+ +  YVLL+N+YA  G+W +V   R  MK   ++K  G S V + + VH F
Sbjct: 495 DKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTF 554

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
           +AGD  HP+   IYE+L  L  KM++ GYVP+T  AL D+E E KE  ++ HSEK+A+ F
Sbjct: 555 LAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVF 614

Query: 876 VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            +    + PIRI KNLRVCGDCH A K ISKIV REIV+RD+NRFHHF DG CSCGDYW
Sbjct: 615 AILNTQESPIRITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 191/390 (48%), Gaps = 29/390 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H ++    F  +  L   L+  Y   G+   A  +FD +P+RN + +  ++  Y
Sbjct: 49  KTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSY 108

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
            +  + ++A  +F++MV  GF  + Y    VL+AC  C     + G+Q+H  V K     
Sbjct: 109 MNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACS-CS-DNLRIGLQLHGAVFKVGLDL 166

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V N LIA+YG C    + AR + +E++++D++SWNS+++ Y+Q         +   M
Sbjct: 167 NLFVGNGLIALYGKCGCLPE-ARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREM 225

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             +G R   KP+  T  SL+ A  ++       ++++   ++K  L+S     + ++S +
Sbjct: 226 --DGVRQ--KPDACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLVS----WNVMISVY 277

Query: 242 ARLGNFYYARKIFEQM----IQKNVVS----------MNGLMEGRRKGKEVHGYLIRSGL 287
            +      +  ++ QM    ++ + ++          ++ L+ GRR    +H Y+ R  L
Sbjct: 278 MKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRR----IHEYVERKKL 333

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
              + + N L++MYA+CG ++D++ VF  M  +D  SW ++IS     G    A+  F  
Sbjct: 334 CPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTE 393

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
           M+  G    + + ++ LS+C+  G +  G+
Sbjct: 394 MQNSGQSPDSIAFVAILSACSHSGLLNEGK 423


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 259/704 (36%), Positives = 398/704 (56%), Gaps = 30/704 (4%)

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGLFDMVAVG 294
           ++ +AR+G    AR++F++M  K +VS N ++ G     + +E   YL            
Sbjct: 23  IARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREAR-YLFDKMPERNTVSW 81

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           NGL++ Y K   + ++R  F  M  ++ VSW  M+ G  Q G   EA   F  M    ++
Sbjct: 82  NGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVV 141

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGL-KLGLDSDVSVSNALLSLYADAGYLSRCLK 413
           S    L          G I + +     GL  +    DV     ++S Y   G L+   +
Sbjct: 142 SWTVML---------GGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARE 192

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           +F  MP  + +SW ++I  +  +   V  A K +  M       N V++  +L   +   
Sbjct: 193 LFDEMPRRNVISWTTMISGYVQN-GQVDVARKLFEVMPEK----NEVSWTAMLMGYTQGG 247

Query: 474 MGKLGHQV-HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
             +   ++  A  +K  VA      NA++  +G+ GE+    ++F ++ E+ D+ +W++M
Sbjct: 248 RIEEASELFDAMPVKAVVAC-----NAMILGFGQNGEVAKARQVFDQIREK-DDGTWSAM 301

Query: 533 ISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL 592
           I  Y       +A+NL   M + G + +  +  +VLS CAS+A+L+ G +VHA  V++  
Sbjct: 302 IKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQF 361

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
           + DV + S L+ MY KCG +  A + FD    +++  WNS+I+GYA+HG  ++AL +F +
Sbjct: 362 DSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHE 421

Query: 653 MKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG 712
           M   G   D VTFVGVLSACS+ G V EG + F+SM   Y + P+ E ++CMVDLLGRAG
Sbjct: 422 MCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAG 481

Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLL 772
            ++   + I KMP+  +++IW  +LGA CR +     L   AA  L ++EP+NA  Y+LL
Sbjct: 482 LVNDAMDLIQKMPVEADAIIWGALLGA-CRTHM-NMNLAEVAAKKLLQLEPKNAGPYILL 539

Query: 773 ANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG-DESHPEKDLIYEK 831
           +N+YAS G+W DVA+ R+ M+  +V K  GCSW+ ++  VH+F  G    HPE   I + 
Sbjct: 540 SNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKM 599

Query: 832 LKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKN 890
           L++L+  +R+AGY P + F L D++ E K   + +HSE++AVAF L +  + +PIR+MKN
Sbjct: 600 LEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKN 659

Query: 891 LRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           LRVCGDCHSA K I+KI GREI+LRD+NRFHHF DG CSC DYW
Sbjct: 660 LRVCGDCHSAIKLIAKITGREIILRDANRFHHFKDGFCSCRDYW 703



 Score =  186 bits (473), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 140/537 (26%), Positives = 243/537 (45%), Gaps = 77/537 (14%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N+ I  Y R+G + SA ++FDEMPD+  VSW  +V+GY       EA  +F +M      
Sbjct: 20  NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERN-- 77

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
                                          +  N    G V N +++           A
Sbjct: 78  ------------------------------TVSWNGLISGYVKNRMVSE----------A 97

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           R+ F+ +  R+++SW +++  Y Q G       LF +M  +    ++       G LI  
Sbjct: 98  RKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEK----NVVSWTVMLGGLIQV 153

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLS---------------------DLYVGSALVSGFA 242
                  G + +  +  +V +  ++S                     ++   + ++SG+ 
Sbjct: 154 RRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYV 213

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVG-----NGL 297
           + G    ARK+FE M +KN VS   ++ G  +G  +      S LFD + V      N +
Sbjct: 214 QNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEA---SELFDAMPVKAVVACNAM 270

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           +  + + G +  +R VF  +  KD  +W+ MI   ++ G   EA+  F  M+R+G+ S+ 
Sbjct: 271 ILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNF 330

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
            SLIS LS CASL  +  G+Q+H E +K   DSDV V++ L+++Y   G L +  ++F  
Sbjct: 331 PSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDR 390

Query: 418 MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
               D V WNS+I  +A    LV EA++ + +M  +G + +GVTF+ +L+A S     K 
Sbjct: 391 FSPKDIVMWNSIITGYA-QHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKE 449

Query: 478 GHQV-HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           G ++  +   KY V  +T     ++   G+ G ++D   +  +M    D + W +++
Sbjct: 450 GLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALL 506



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 254/529 (48%), Gaps = 51/529 (9%)

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N  IA Y   +   + ARR+F+E+  + ++SWNS+++ Y Q         LF +M     
Sbjct: 20  NSQIARYAR-IGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERN- 77

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKA-GLLSDLYVGS--ALVSGFAR 243
                          T +++ ++SG Y+  ++++  +KA   + +  V S  A+V G+ +
Sbjct: 78  ---------------TVSWNGLISG-YVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQ 121

Query: 244 LGNFYYARKIFEQMIQKNVVS----MNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN---- 295
            G    A  +F QM +KNVVS    + GL++ RR  +         GLFD++ V +    
Sbjct: 122 EGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEA-------RGLFDIMPVKDVVAR 174

Query: 296 -GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
             +++ Y + G + ++R +F  M  ++ +SW TMISG  QNG  + A   F  M     +
Sbjct: 175 TNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEV 234

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS-NALLSLYADAGYLSRCLK 413
           S    L         +G+   G+      L   +     V+ NA++  +   G +++  +
Sbjct: 235 SWTAML---------MGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQ 285

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           VF  + E D  +W+++I  + + +    EA+  +  M+R G   N  + I++L+  +S +
Sbjct: 286 VFDQIREKDDGTWSAMIKVY-ERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLA 344

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
               G QVHA+++K    ++  + + L++ Y KCG++    +IF R S  +D V WNS+I
Sbjct: 345 SLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSP-KDIVMWNSII 403

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV-HACGVRACL 592
           +GY  + L+ +A+ +   M   G   D  TF  VLSAC+    ++ G+E+  +   +  +
Sbjct: 404 TGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLV 463

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARH 640
           E      + +VD+  + G ++ A      MPV  +   W +++     H
Sbjct: 464 EPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTH 512



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 202/455 (44%), Gaps = 74/455 (16%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N LI+ YV+   ++ A K FD MP+RN VSW  +V GY  +G+ +EA  +F +M     +
Sbjct: 82  NGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVV 141

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC- 142
                LG +++  +     G    M V  +V ++N             + G C E     
Sbjct: 142 SWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNM------------ISGYCQEGRLAE 189

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-QREGFRYSLKPNEYTFGSLI 201
           AR +F+E+  R++ISW ++IS Y Q G      KLF  M ++    ++     YT G  I
Sbjct: 190 ARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRI 249

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
             A  S L  +  ++ ++A              +A++ GF + G    AR++F+Q+ +K+
Sbjct: 250 EEA--SELFDAMPVKAVVAC-------------NAMILGFGQNGEVAKARQVFDQIREKD 294

Query: 262 -----------------------------------------VVSMNGLMEGRRKGKEVHG 280
                                                    V+S+   +     G++VH 
Sbjct: 295 DGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHA 354

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
            L++S     V V + L+ MY KCG +  +R +F     KD V WN++I+G  Q+G  EE
Sbjct: 355 ELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEE 414

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG--LDSDVSVSNAL 398
           A+  F  M   G+ +   + +  LS+C+  G +  G +I  E +K    ++        +
Sbjct: 415 ALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIF-ESMKSKYLVEPKTEHYACM 473

Query: 399 LSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           + L   AG ++  + +   MP E D + W +++GA
Sbjct: 474 VDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGA 508



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 109/482 (22%), Positives = 184/482 (38%), Gaps = 137/482 (28%)

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           N  +  YA+ G I+ +R VF  M  K  VSWN+M++G  QN    EA   F     D + 
Sbjct: 20  NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLF-----DKMP 74

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
             N           ++ W                       N L+S Y     +S   K 
Sbjct: 75  ERN-----------TVSW-----------------------NGLISGYVKNRMVSEARKA 100

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  MPE + VSW +++  +   E LVSEA   +  M       N V++  +L        
Sbjct: 101 FDTMPERNVVSWTAMVRGYV-QEGLVSEAETLFWQMPEK----NVVSWTVMLGGLIQVRR 155

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
                 +   +   +V   T     ++S Y + G + +  ++F  M  RR+ +SW +MIS
Sbjct: 156 IDEARGLFDIMPVKDVVARTN----MISGYCQEGRLAEARELFDEMP-RRNVISWTTMIS 210

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           GY+ N  +  A  L   M ++ +                                     
Sbjct: 211 GYVQNGQVDVARKLFEVMPEKNE------------------------------------- 233

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY-------------------------- 628
             V  +A++  Y++ GRI+ AS  FD MPV+ V                           
Sbjct: 234 --VSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIR 291

Query: 629 -----SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
                +W++MI  Y R G   +AL LF+ M+ +G   +  + + VLS C+    +D G  
Sbjct: 292 EKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHG-- 349

Query: 684 HFKSMSQVYGLIPQLEQF-------SCMVDLLGRAGELDKIEEFINKMPITPNSLI-WRT 735
                 QV+  + +  QF       S ++ +  + G+L K  +  ++   +P  ++ W +
Sbjct: 350 -----RQVHAELVK-SQFDSDVFVASVLITMYVKCGDLVKARQIFDR--FSPKDIVMWNS 401

Query: 736 VL 737
           ++
Sbjct: 402 II 403



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 51/93 (54%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H +++K  F  DVF+ + LI +YV+ GDL  A ++FD    ++ V W  I++GY   G+ 
Sbjct: 353 HAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLV 412

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            EA ++F EM  +G   +      VL AC   G
Sbjct: 413 EEALQVFHEMCSSGMATDGVTFVGVLSACSYTG 445



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 21/223 (9%)

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
           R C    +   S +   Y++ G+I+ A R FD MP + + SWNSM++GY ++    +A  
Sbjct: 10  RYCTSVAIAYNSQIAR-YARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARY 68

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           LF +M    P  + V++ G++S      +V E  K F +M +       +  ++ MV   
Sbjct: 69  LFDKM----PERNTVSWNGLISGYVKNRMVSEARKAFDTMPE-----RNVVSWTAMVRGY 119

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
            + G + + E    +MP   N + W  +LG   +   R+ +  R     LF++ P   V 
Sbjct: 120 VQEGLVSEAETLFWQMP-EKNVVSWTVMLGGLIQV--RRIDEARG----LFDIMPVKDV- 171

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
            V   NM +   +   +A+AR+     E+ +    SW TM  G
Sbjct: 172 -VARTNMISGYCQEGRLAEARELFD--EMPRRNVISWTTMISG 211


>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/681 (36%), Positives = 388/681 (56%), Gaps = 12/681 (1%)

Query: 261 NVVSMNGLMEGRRKGKEVHGYLI----RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
           N++  +   +  R GK +H  L+     S   D+  + N L+N+Y+KCG    +R +F  
Sbjct: 28  NLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQI-NSLINLYSKCGQSKCARKLFDR 86

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM-RRDGLMSSNFSLISTLSSCASLGWIML 375
           M+ ++ VSW+ ++ G    G   E +  F  +   D    + +     LS CA  G +  
Sbjct: 87  MLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKE 146

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G+Q HG  LK GL     V NAL+ +Y+   ++   +++   +P  D  S+NS++ A  +
Sbjct: 147 GKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVE 206

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           S     EA +    M       + VT++++L   +     +LG Q+HAQ++K  +  +  
Sbjct: 207 S-GCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVF 265

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           + + L+  YGKCGE+ +  K F  + +R + V+W ++++ Y+ N    + +NL   M   
Sbjct: 266 VSSTLIDTYGKCGEVLNARKQFDGLRDR-NVVAWTAVLTAYLQNGHFEETLNLFTKMELE 324

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
             R + FTFA +L+ACAS+  L  G  +H   V +  +  +++G+AL++MYSK G ID +
Sbjct: 325 DTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSS 384

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
              F  M  R+V +WN+MI GY+ HG G +AL +F  M   G  P++VTF+GVLSAC H 
Sbjct: 385 YNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHL 444

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI-NKMPITPNSLIWR 734
            LV EGF +F  + + + + P LE ++CMV LLGRAG LD+ E F+     +  + + WR
Sbjct: 445 ALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWR 504

Query: 735 TVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKE 794
           T+L AC     R   LG++    + +M+P +   Y LL+NM+A   KW+ V K RK MKE
Sbjct: 505 TLLNACHIH--RNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRKLMKE 562

Query: 795 AEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFD 854
             +KKE G SW+ +++  HVFV+   +HPE   I+EK+++L   ++  GY P     L D
Sbjct: 563 RNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQLLAMIKPLGYAPDVGVVLHD 622

Query: 855 LEPESKEDLVSYHSEKIAVAFVLTR-NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIV 913
           +E E KE  +S+HSEK+A+A+ L +     PIRI+KNLR+C DCH A K ISK   R I+
Sbjct: 623 VEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRIIKNLRMCDDCHIAVKLISKATNRLII 682

Query: 914 LRDSNRFHHFNDGKCSCGDYW 934
           +RD+NRFHHF +G C+C D+W
Sbjct: 683 VRDANRFHHFREGLCTCNDHW 703



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 230/484 (47%), Gaps = 58/484 (11%)

Query: 104 FKFGMQVHCLVLKSNQTF---DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNS 160
            +FG  +H  ++  NQT    D    N LI +Y  C +S  CAR++F+ +  R+++SW++
Sbjct: 39  LRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQS-KCARKLFDRMLQRNVVSWSA 97

Query: 161 IISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQI 218
           ++  Y  +G+ + V  LF  +      Y   PNEY F  +++    S  V  G    +Q 
Sbjct: 98  LMMGYLHKGEVLEVLGLFRNLVSLDSAY---PNEYIFTIVLSCCADSGRVKEG----KQC 150

Query: 219 LAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------ 272
              + K+GLL   YV +AL+  ++R  +   A +I + +   +V S N ++         
Sbjct: 151 HGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCR 210

Query: 273 -----------------------------------RKGKEVHGYLIRSGLFDMVAVGNGL 297
                                              + G ++H  L+++GL   V V + L
Sbjct: 211 GEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTL 270

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           ++ Y KCG + ++R  F  +  ++ V+W  +++   QNG +EE +  F  M  +    + 
Sbjct: 271 IDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNE 330

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
           F+    L++CASL  +  G  +HG  +  G  + + V NAL+++Y+ +G +     VF  
Sbjct: 331 FTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSN 390

Query: 418 MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
           M   D ++WN++I  ++    L  +A+  + DM  AG  PN VTFI +L+A    ++ + 
Sbjct: 391 MMNRDVITWNAMICGYS-HHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQE 449

Query: 478 GHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR-DEVSWNSMISG 535
           G     Q++ K++V         +++  G+ G +D+ E      ++ + D V+W ++++ 
Sbjct: 450 GFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNA 509

Query: 536 -YIH 538
            +IH
Sbjct: 510 CHIH 513



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 145/548 (26%), Positives = 228/548 (41%), Gaps = 87/548 (15%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+   N+LIN+Y + G    A KLFD M  RN VSW+ ++ GY HKG   E   +F+ +V
Sbjct: 60  DITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLV 119

Query: 79  RA-GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
                  N Y    VL  C + G    K G Q H  +LKS       V N LI MY  C 
Sbjct: 120 SLDSAYPNEYIFTIVLSCCADSGR--VKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCF 177

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
              D A +I + +   D+ S+NSI+S   + G      ++  RM  E   +    +  T+
Sbjct: 178 H-VDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIW----DSVTY 232

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            S++     + +    L  QI A + K GL+ D++V S L+  + + G    ARK F+ +
Sbjct: 233 VSVL--GLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGL 290

Query: 258 IQKNVVSMNGL---------------------MEGRRK--------------------GK 276
             +NVV+   +                     +E  R                     G 
Sbjct: 291 RDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGD 350

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
            +HG ++ SG  + + VGN L+NMY+K G ID S +VF  M+ +D ++WN MI G   +G
Sbjct: 351 LLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHG 410

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL-KLGLDSDVSVS 395
             ++A++ F  M   G   +  + I  LS+C  L  +  G     + + K  ++  +   
Sbjct: 411 LGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHY 470

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
             +++L   AG L         M    QV W+ V                         W
Sbjct: 471 TCMVALLGRAGLLDEAEN---FMKTTTQVKWDVV------------------------AW 503

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
                T +N      ++++GK   +   Q+  ++V   T + N     + K  + D   K
Sbjct: 504 R----TLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNM----HAKARKWDGVVK 555

Query: 516 IFARMSER 523
           I   M ER
Sbjct: 556 IRKLMKER 563



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 139/321 (43%), Gaps = 21/321 (6%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H Q+LK G  +DVF+ +TLI+ Y + G++ +A K FD + DRN V+W  +++ Y   G 
Sbjct: 251 IHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGH 310

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             E   +F +M       N +    +L AC         +G  +H  ++ S      +V 
Sbjct: 311 FEETLNLFTKMELEDTRPNEFTFAVLLNACASL--VALAYGDLLHGRIVMSGFKNHLIVG 368

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI MY     + D +  +F  +  RD+I+WN++I  YS  G       +F  M   G 
Sbjct: 369 NALINMYSKS-GNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGE 427

Query: 187 RYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                PN  TF  +++A    + V  G Y   QI+   KK  +   L   + +V+   R 
Sbjct: 428 ----CPNYVTFIGVLSACVHLALVQEGFYYFDQIM---KKFDVEPGLEHYTCMVALLGRA 480

Query: 245 GNFYYARKIFEQMIQK--NVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNG 296
           G    A    +   Q   +VV+   L+           GK++   +I+    D V     
Sbjct: 481 GLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHD-VGTYTL 539

Query: 297 LVNMYAKCGTIDDSRSVFRFM 317
           L NM+AK    D    + + M
Sbjct: 540 LSNMHAKARKWDGVVKIRKLM 560



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 127/273 (46%), Gaps = 46/273 (16%)

Query: 4   AKLFH----LQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           ++ FH    +QIL      DVF  N+                               I+S
Sbjct: 174 SRCFHVDSAMQILDTVPGDDVFSYNS-------------------------------ILS 202

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
                G   EA ++ K MV    + +     SVL  C +      + G+Q+H  +LK+  
Sbjct: 203 ALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQI--RDLQLGLQIHAQLLKTGL 260

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
            FD  VS+ LI  YG C E  + AR+ F+ +  R++++W ++++ Y Q G       LF+
Sbjct: 261 VFDVFVSSTLIDTYGKCGEVLN-ARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFT 319

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSV-LSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           +M+ E  R    PNE+TF  L+ A  S V L+   LL   + M   +G  + L VG+AL+
Sbjct: 320 KMELEDTR----PNEFTFAVLLNACASLVALAYGDLLHGRIVM---SGFKNHLIVGNALI 372

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           + +++ GN   +  +F  M+ ++V++ N ++ G
Sbjct: 373 NMYSKSGNIDSSYNVFSNMMNRDVITWNAMICG 405



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 53/91 (58%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           L H +I+  GF   + + N LIN+Y + G++ S+  +F  M +R+ ++W  ++ GY+H G
Sbjct: 351 LLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHG 410

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRAC 96
           +  +A  +F++M+ AG   N      VL AC
Sbjct: 411 LGKQALLVFQDMMSAGECPNYVTFIGVLSAC 441


>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
          Length = 696

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 255/643 (39%), Positives = 371/643 (57%), Gaps = 10/643 (1%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           LVN+Y+K      + +          VS+   ISG  Q+    +A+  F AM R GL  +
Sbjct: 59  LVNLYSKLDLPGAAAASLAADPSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPN 118

Query: 357 NFSLISTLSSCASLGWIML-GQQIHGEGLKLG-LDSDVSVSNALLSLYADAGYLSRCLKV 414
           +F+  S   + AS       G Q+H   L+ G L  D  VS A L +Y   G L+   ++
Sbjct: 119 DFTFPSAFKAAASAPPRSAAGTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRL 178

Query: 415 FFLMPEHDQVSWNSVI-GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           F  MP  + V+WN+V+  A  D   L  E V+ Y  +R AG  PN V+      A +  +
Sbjct: 179 FDEMPNRNVVAWNAVMTNAVLDGRPL--ETVEAYFGLRGAGGMPNVVSVCAFFNACAGMT 236

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
              LG Q +  V K     + ++ N+++  YGKC  +     +F  M  R + VSW SM+
Sbjct: 237 NLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVR-NNVSWCSMV 295

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
             Y  N    +A  +     + G+    F  ++VL+ CA +  L+ G  +HA  VR+C++
Sbjct: 296 VAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCID 355

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
            ++ + SALVDMY KCG I+ A + F  MP RN+ +WN+MI GYA  G    AL++F +M
Sbjct: 356 SNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKM 415

Query: 654 KL-DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG 712
            +     P+++T V VL+ACS  GL  EG++ F++M   +G+ P++E ++C+VDLL RAG
Sbjct: 416 IMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAG 475

Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLL 772
             ++  + I  MP+ P+  +W  +LG C      KTELGR AA  LFE++PQ++ N+VLL
Sbjct: 476 MEERAYKIIQGMPMRPSISVWGALLGGCKMHG--KTELGRIAAEKLFELDPQDSGNHVLL 533

Query: 773 ANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKL 832
           +NM AS G+W +    RK MK   +KK+ G SW+T K+ VHVF A D +H     I   L
Sbjct: 534 SNMLASAGRWAEATDVRKEMKNVGIKKDPGRSWITWKNVVHVFQAKDTTHDMNREIQALL 593

Query: 833 KELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNL 891
            +L  +M+ AGY+P T++AL+DLE E KE  V  HSEK+A+AF ++     +PIRIMKNL
Sbjct: 594 AKLKGQMQAAGYMPDTQYALYDLEEEEKESEVFQHSEKLALAFGLICIPPGIPIRIMKNL 653

Query: 892 RVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           R+C DCH AFKFIS I GREI++RD+N FHHF + +CSC DYW
Sbjct: 654 RICVDCHRAFKFISGIAGREIIVRDNNMFHHFKNYECSCKDYW 696



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 186/372 (50%), Gaps = 8/372 (2%)

Query: 275 GKEVHGYLIRSG-LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           G ++H   +R G L D   V    ++MY K G +  +R +F  M  ++ V+WN +++   
Sbjct: 139 GTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAV 198

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            +G   E +  +  +R  G M +  S+ +  ++CA +  + LG+Q +G   K G   DVS
Sbjct: 199 LDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVS 258

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           VSN+++  Y     + +   VF  M   + VSW S++ A+A + A   EA   YL  RRA
Sbjct: 259 VSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGA-EEEAFFVYLGARRA 317

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G  P      ++L   +      LG  +HA  ++  + +   + +AL+  YGKCG ++D 
Sbjct: 318 GEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDA 377

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL--DHFTFATVLSAC 571
           E++F  M + R+ V+WN+MI GY H      A++ V+  M  GQ    ++ T   VL+AC
Sbjct: 378 EQVFFEMPQ-RNLVTWNAMIGGYAHIGDAHNALS-VFDKMIMGQETAPNYITLVNVLTAC 435

Query: 572 ASVATLERGMEV-HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYS 629
           +     + G E+      R  +E  +   + +VD+  + G  + A +    MP+R ++  
Sbjct: 436 SRGGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISV 495

Query: 630 WNSMISGYARHG 641
           W +++ G   HG
Sbjct: 496 WGALLGGCKMHG 507



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 114/473 (24%), Positives = 200/473 (42%), Gaps = 76/473 (16%)

Query: 7   FHLQILKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
            H   L+ G+   D F+    +++Y + G LA A +LFDEMP+RN V+W  +++     G
Sbjct: 142 LHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDG 201

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
              E  + +  +  AG + N  ++ +   AC   G +    G Q +  V K     D  V
Sbjct: 202 RPLETVEAYFGLRGAGGMPNVVSVCAFFNAC--AGMTNLSLGEQFYGFVAKCGFGKDVSV 259

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           SN ++  YG C      AR +F+ +  R+ +SW S++  Y+Q G     F ++   +R G
Sbjct: 260 SNSVVDFYGKC-RCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAG 318

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
                +P ++   S++T    + L G  L + + A+  ++ + S+++V SALV  + + G
Sbjct: 319 ----EEPTDFMVSSVLTTC--AGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCG 372

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
               A ++F +M Q+N+V+ N ++ G                             YA  G
Sbjct: 373 GIEDAEQVFFEMPQRNLVTWNAMIGG-----------------------------YAHIG 403

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
              ++ SVF           + MI G +    Y   +    A  R GL    + L  T+ 
Sbjct: 404 DAHNALSVF-----------DKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMK 452

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
                 W            + G++  +     ++ L   AG   R  K+   MP    +S
Sbjct: 453 ------W------------RFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSIS 494

Query: 426 -WNSVIGA---FADSEALVSEAVKYY-LDMRRAGWSPNGVTFINILAAASSFS 473
            W +++G       +E     A K + LD + +G   N V   N+LA+A  ++
Sbjct: 495 VWGALLGGCKMHGKTELGRIAAEKLFELDPQDSG---NHVLLSNMLASAGRWA 544



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 153/339 (45%), Gaps = 25/339 (7%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           F+  + K GF  DV + N++++ Y +   +  A  +FD M  RN+VSW  +V  Y   G 
Sbjct: 244 FYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGA 303

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA  ++    RAG     + + SVL  C   G  G   G  +H + ++S    +  V+
Sbjct: 304 EEEAFFVYLGARRAGEEPTDFMVSSVLTTC--AGLLGLDLGRALHAVAVRSCIDSNIFVA 361

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L+ MYG C    D A ++F E+  R+L++WN++I  Y+  GD  +   +F +M     
Sbjct: 362 SALVDMYGKCGGIED-AEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMI---M 417

Query: 187 RYSLKPNEYTFGSLITAAYSSVLS--GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                PN  T  +++TA     L+  G  L Q    M  + G+   +   + +V    R 
Sbjct: 418 GQETAPNYITLVNVLTACSRGGLTKEGYELFQ---TMKWRFGIEPRIEHYACVVDLLCRA 474

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LV 298
           G    A KI + M  +  +S+ G + G  +  GK   G +    LF++    +G    L 
Sbjct: 475 GMEERAYKIIQGMPMRPSISVWGALLGGCKMHGKTELGRIAAEKLFELDPQDSGNHVLLS 534

Query: 299 NMYAKCGTIDDSRSVFRFM--------IGKDSVSWNTMI 329
           NM A  G   ++  V + M         G+  ++W  ++
Sbjct: 535 NMLASAGRWAEATDVRKEMKNVGIKKDPGRSWITWKNVV 573


>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/648 (37%), Positives = 375/648 (57%), Gaps = 18/648 (2%)

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           N +VNMYAKCG++D +  +F  M  K+ VSW  ++SG  Q+G   E    F  M      
Sbjct: 104 NHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGMLI-WHQ 162

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA-GYLSRCLK 413
            + F+  S +S+C   G    G+Q+H   LK   DS V V NAL+ +Y  + G       
Sbjct: 163 PTEFAFASVISACG--GDDNCGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWN 220

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           V+  M   + VSWNS+I  F       + A++ +  M   G   +  T ++I +      
Sbjct: 221 VYEAMGFRNLVSWNSMIAGFQVC-GCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMG 279

Query: 474 MG-KLGHQVHAQVIKYNVANETTIENALLSCYGKCG-EMDDCEKIFARMSERRDEVSWNS 531
            G +   Q+    IK     +  +  AL+  Y   G E+ DC +IF  +  R+D VSW  
Sbjct: 280 DGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTG 339

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC 591
           +I+ +   +   KA+ +    ++     D   F+ VL ACA +AT    + V +  ++  
Sbjct: 340 IIAAFAERDP-KKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVG 398

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
            E D+V+ +AL+   ++CG +  + + FD M  R+  SWNSM+  YA HG G +AL LFS
Sbjct: 399 FEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFS 458

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRA 711
           QM      PD  TFV +LSACSHAG+ +EG K F++MS  +G++PQL+ ++CMVD+LGRA
Sbjct: 459 QMDAQ---PDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGRA 515

Query: 712 GELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVL 771
           G++ + +E I+KMP+ P+S++W  +LG+C +    +T+L + AA  L E++P N++ YVL
Sbjct: 516 GQISEAKELIDKMPMEPDSVVWSALLGSCRKHG--ETKLAKLAAVKLKELDPNNSLGYVL 573

Query: 772 LANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEK 831
           ++N++ + G++ +    R+ M+   V+KE G SW+ + + VH F +G + HPEK+ I  +
Sbjct: 574 MSNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQQHPEKEAICAR 633

Query: 832 LKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKL-----PIR 886
           L+EL ++++D GYVPQ   AL D+E E KE+ + YHSEK+A+AF L     +      I+
Sbjct: 634 LEELVRRLKDLGYVPQISLALHDIEDEHKEEQLYYHSEKLALAFALMNVGSICCSGNTIK 693

Query: 887 IMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           IMKN+R+C DCH+  K  S++V  EIV+RDSNRFHHF    CSC DYW
Sbjct: 694 IMKNIRICVDCHNFMKLASELVDMEIVVRDSNRFHHFKAKVCSCNDYW 741



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 214/470 (45%), Gaps = 79/470 (16%)

Query: 18  YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM 77
           +++FL N ++N+Y + G L  A ++FDEMP++N VSW  +VSGY   G SNE  ++F+ M
Sbjct: 98  FNLFLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGM 157

Query: 78  VRAGFLLNRYALGSVLRAC---QECGPSGFKFGMQVHCLVLKSNQTFDGL--VSNVLIAM 132
           +        +A  SV+ AC     C       G QVH L LK+  +FD    V N LI M
Sbjct: 158 L-IWHQPTEFAFASVISACGGDDNC-------GRQVHALALKT--SFDSCVYVGNALIMM 207

Query: 133 YGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKP 192
           Y       D A  ++E +  R+L+SWNS+I+ +   G      +LFS+M   G R+    
Sbjct: 208 YCKSCGGADEAWNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRAT 267

Query: 193 NEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL-GNFYYAR 251
               F  L          G     Q+  +  K G +  + V +ALV  ++ L G      
Sbjct: 268 LVSIFSCLCGMG-----DGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCY 322

Query: 252 KIFEQMI-QKNVVSMNGLMEG--------------------------------------- 271
           +IF ++  +++VVS  G++                                         
Sbjct: 323 RIFLELDGRQDVVSWTGIIAAFAERDPKKALVIFRQFLRECLAPDRHMFSIVLKACAGLA 382

Query: 272 -RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
             R    V  ++++ G  D + + N L++  A+CG++  S+ VF  M  +D+VSWN+M+ 
Sbjct: 383 TERHALTVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLK 442

Query: 331 GLDQNGCYEEAIMNFCAM--RRDGLMSSNFSLISTLSSCASLGWIMLGQQI-----HGEG 383
               +G  +EA++ F  M  + DG      + ++ LS+C+  G    G +I     +  G
Sbjct: 443 AYAMHGQGKEALLLFSQMDAQPDGA-----TFVALLSACSHAGMAEEGAKIFETMSNNHG 497

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           +   LD        ++ +   AG +S   ++   MP E D V W++++G+
Sbjct: 498 IVPQLDHYA----CMVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGS 543



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 200/451 (44%), Gaps = 28/451 (6%)

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV--SNALLSLYADAGYLSR 410
           L+ S+ +  +   +CA    +  GQ +H        +SD ++  +N ++++YA  G L  
Sbjct: 59  LVHSHHTYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDY 118

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW-SPNGVTFINILAAA 469
             ++F  MPE + VSW +++  +A      +E  + +  M    W  P    F ++++A 
Sbjct: 119 AHQMFDEMPEKNIVSWTALVSGYAQ-HGRSNECFRVFRGMLI--WHQPTEFAFASVISAC 175

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK-CGEMDDCEKIFARMSERRDEVS 528
                   G QVHA  +K +  +   + NAL+  Y K CG  D+   ++  M   R+ VS
Sbjct: 176 GGDD--NCGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMG-FRNLVS 232

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA-CASVATLERGMEVHACG 587
           WNSMI+G+       +A+ L   M   G R D  T  ++ S  C     LE   ++    
Sbjct: 233 WNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECCFQLQCLT 292

Query: 588 VRACLEFDVVIGSALVDMYSKCGR--IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
           ++      + + +ALV  YS  G    D    F +L   ++V SW  +I+ +A      K
Sbjct: 293 IKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFAERD-PKK 351

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH---FKSMSQVYGLIPQLEQFS 702
           AL +F Q   +   PD   F  VL AC  AGL  E  +H    +S     G    +   +
Sbjct: 352 ALVIFRQFLRECLAPDRHMFSIVLKAC--AGLATE--RHALTVQSHVLKVGFEDDIVLAN 407

Query: 703 CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
            ++    R G +   ++  +KM  + +++ W ++L A           G++A  +  +M+
Sbjct: 408 ALIHACARCGSVALSKQVFDKMG-SRDTVSWNSMLKAYAMHG-----QGKEALLLFSQMD 461

Query: 763 PQ-NAVNYVLLANMYASGGKWEDVAKARKAM 792
            Q +   +V L +  +  G  E+ AK  + M
Sbjct: 462 AQPDGATFVALLSACSHAGMAEEGAKIFETM 492



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 39/68 (57%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
            +LK GF  D+ L N LI+   R G +A + ++FD+M  R++VSW  ++  Y   G   E
Sbjct: 393 HVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKE 452

Query: 70  ACKMFKEM 77
           A  +F +M
Sbjct: 453 ALLLFSQM 460


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/716 (35%), Positives = 405/716 (56%), Gaps = 20/716 (2%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMN----------GLMEGRRKGKEVHGYLIR 284
           +AL+  ++ LG F+ A  ++  M++  V                +   R G+ +H +   
Sbjct: 69  NALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAA 128

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
           +GL   + V   L+++Y +C     +R+VF  M  +D V+WN M++G   +G Y  AI +
Sbjct: 129 AGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAH 188

Query: 345 FCAMRRDGLMSSNFS-LISTLSSCASLGWIMLGQQIHGEGLKLGLDSD---VSVSNALLS 400
              M+  G +  N S L+S L   A  G +  G  IH   L+  L+ +   V +  ALL 
Sbjct: 189 LLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLD 248

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +YA    L    +VF  MP  + V+W+++IG F   + + +EA   + DM   G      
Sbjct: 249 MYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM-TEAFNLFKDMLVEGLCFLSA 307

Query: 461 TFI-NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           T + + L   +S +   +G Q+HA + K  +  + T  N+LLS Y K G +++    F  
Sbjct: 308 TSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDE 367

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           ++ + D +S+ +++SG + N    +A  +   M       D  T  +++ AC+ +A L+ 
Sbjct: 368 IAVK-DTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQH 426

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G   H   +   L  +  I ++L+DMY+KCG+ID + + FD MP R+V SWN+MI+GY  
Sbjct: 427 GKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGI 486

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
           HG G +A TLF  MK  G  PD VTF+ +++ACSH+GLV EG   F +M+  YG++P++E
Sbjct: 487 HGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRME 546

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            + CMVDLL R G LD+  +FI  MP+  +  +W  +LGA CR + +  +LG++ + ++ 
Sbjct: 547 HYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGA-CRIH-KNIDLGKQVSRIIQ 604

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           ++ P+   N+VLL+N++++ G++++ A+ R   K    KK  G SW+ +   +H FV GD
Sbjct: 605 KLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGD 664

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLT 878
           +SHP    IY +L  +   ++  GY   T F L DLE E KE  + YHSEK+A+AF VL+
Sbjct: 665 QSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLS 724

Query: 879 RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            N    I + KNLRVCGDCH+A K+++ +  R I++RD+NRFHHF +G+CSCG++W
Sbjct: 725 LNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 138/562 (24%), Positives = 251/562 (44%), Gaps = 62/562 (11%)

Query: 30  YVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYAL 89
           ++  G LA A ++FD +P  ++ ++  ++  Y+  G  + A  +++ M+R     N+Y  
Sbjct: 44  HISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTF 103

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
             VL+AC        + G  +H     +    D  VS  LI +Y  C      AR +F +
Sbjct: 104 PFVLKACSAL--VDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGP-ARNVFAK 160

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSS 207
           +  RD+++WN++++ Y+  G           MQ  G    L+PN  T  SL+   A + +
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHG---GLRPNASTLVSLLPLLAQHGA 217

Query: 208 VLSGS----YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
           +  G+    Y L+  L   ++  L     +G+AL+  +A+     YA ++F  M  +N V
Sbjct: 218 LFQGTSIHAYCLRACLEQNEEQVL-----IGTALLDMYAKCKQLVYACRVFHGMPVRNDV 272

Query: 264 SMNGLMEG------------------------------------------RRKGKEVHGY 281
           + + L+ G                                             G ++H  
Sbjct: 273 TWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHAL 332

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           + +SG+   +   N L++MYAK G I+++   F  +  KD++S+  ++SG  QNG  EEA
Sbjct: 333 IAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEA 392

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
            + F  M+   +     +++S + +C+ L  +  G+  HG  +  GL  + S+ N+L+ +
Sbjct: 393 FLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDM 452

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           YA  G +    +VF  MP  D VSWN++I  +     L  EA   +L M+  G++P+ VT
Sbjct: 453 YAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYG-IHGLGKEATTLFLGMKNQGFAPDDVT 511

Query: 462 FINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           FI ++AA S   +   G H       KY +         ++    + G +D+  +    M
Sbjct: 512 FICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSM 571

Query: 521 SERRDEVSWNSMISG-YIHNEL 541
             + D   W +++    IH  +
Sbjct: 572 PLKADVRVWGALLGACRIHKNI 593



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 231/465 (49%), Gaps = 14/465 (3%)

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G +  +R VF  +   D+ ++N +I      G +  AI  + +M R  +  + ++    L
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +C++L  +  G+ IH      GL +D+ VS AL+ LY           VF  MP  D V
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMR-RAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           +WN+++  +A+   +   A+ + LDM+   G  PN  T +++L   +       G  +HA
Sbjct: 168 AWNAMLAGYAN-HGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHA 226

Query: 484 QVIKYNVAN---ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
             ++  +     +  I  ALL  Y KC ++    ++F  M  R D V+W+++I G++  +
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRND-VTWSALIGGFVLCD 285

Query: 541 LLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
            + +A NL   M+  G   L   + A+ L  CAS+A L  G ++HA   ++ +  D+   
Sbjct: 286 RMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTAS 345

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           ++L+ MY+K G I+ A+ FFD + V++  S+ +++SG  ++G  ++A  +F +M+     
Sbjct: 346 NSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNME 405

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           PD  T V ++ ACSH   +  G     S+  + GL  +    + ++D+  + G++D   +
Sbjct: 406 PDIATMVSLIPACSHLAALQHGKCSHGSVI-IRGLALETSICNSLIDMYAKCGKIDLSRQ 464

Query: 720 FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ 764
             +KMP   + + W T++     A      LG++A  +   M+ Q
Sbjct: 465 VFDKMP-ARDVVSWNTMI-----AGYGIHGLGKEATTLFLGMKNQ 503



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 218/505 (43%), Gaps = 54/505 (10%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G   D+F+   LI++Y+R      A  +F +MP R+ V+W  +++GY + GM + A    
Sbjct: 130 GLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHL 189

Query: 75  KEMV-RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCL--VLKSNQTFDGLVSNVLIA 131
            +M    G   N   L S+L    + G       +  +CL   L+ N+    L+   L+ 
Sbjct: 190 LDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEE-QVLIGTALLD 248

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY  C +    A R+F  +  R+ ++W+++I  +         F LF  M  EG  + L 
Sbjct: 249 MYAKCKQLV-YACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCF-LS 306

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
                    + A+ + +  G+    Q+ A++ K+G+ +DL   ++L+S +A+ G    A 
Sbjct: 307 ATSVASALRVCASLADLHMGT----QLHALIAKSGIHADLTASNSLLSMYAKAGLINEAT 362

Query: 252 KIFEQMIQKNVVSMNGLMEG---------------------------------------- 271
             F+++  K+ +S   L+ G                                        
Sbjct: 363 MFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLA 422

Query: 272 -RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
             + GK  HG +I  GL    ++ N L++MYAKCG ID SR VF  M  +D VSWNTMI+
Sbjct: 423 ALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIA 482

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IHGEGLKLGLD 389
           G   +G  +EA   F  M+  G    + + I  +++C+  G +  G+        K G+ 
Sbjct: 483 GYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGIL 542

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEAL-VSEAVKYY 447
             +     ++ L A  G L    +    MP + D   W +++GA    + + + + V   
Sbjct: 543 PRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRI 602

Query: 448 LDMRRAGWSPNGVTFINILAAASSF 472
           +       + N V   NI +AA  F
Sbjct: 603 IQKLGPEGTGNFVLLSNIFSAAGRF 627



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 144/320 (45%), Gaps = 28/320 (8%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  I K G   D+   N+L+++Y + G +  A+  FDE+  ++++S+  ++SG    G 
Sbjct: 329 LHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGK 388

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           + EA  +FK+M       +   + S++ AC     +  + G   H  V+      +  + 
Sbjct: 389 AEEAFLVFKKMQACNMEPDIATMVSLIPACSHL--AALQHGKCSHGSVIIRGLALETSIC 446

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI MY  C    D +R++F+++  RD++SWN++I+ Y   G       LF  M+ +GF
Sbjct: 447 NSLIDMYAKC-GKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGF 505

Query: 187 RYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                P++ TF  LI A   S  V  G +       M  K G+L  +     +V   AR 
Sbjct: 506 ----APDDVTFICLIAACSHSGLVTEGKHWFD---TMTHKYGILPRMEHYICMVDLLARG 558

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------GKEVHGYLIRSGLFDMVAVGNG- 296
           G    A +  + M  K  V + G + G  +       GK+V   + + G       G G 
Sbjct: 559 GLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLG-----PEGTGN 613

Query: 297 ---LVNMYAKCGTIDDSRSV 313
              L N+++  G  D++  V
Sbjct: 614 FVLLSNIFSAAGRFDEAAEV 633



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 134/290 (46%), Gaps = 17/290 (5%)

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
           H+  +  I Y V ++   +  L     + G++    ++F R+    D  ++N++I  Y  
Sbjct: 20  HRPPSGSISYEVKDKKQWQQELEQHISR-GQLALARQVFDRIPAP-DARAYNALIRAYSW 77

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
                 A++L   M++     + +TF  VL AC+++  L  G  +HA    A L  D+ +
Sbjct: 78  LGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFV 137

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            +AL+D+Y +C R   A   F  MP+R+V +WN+M++GYA HG    A+     M+  G 
Sbjct: 138 STALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGG 197

Query: 659 L-PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF-------SCMVDLLGR 710
           L P+  T V +L   +  G + +G     +    Y L   LEQ        + ++D+  +
Sbjct: 198 LRPNASTLVSLLPLLAQHGALFQG-----TSIHAYCLRACLEQNEEQVLIGTALLDMYAK 252

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
             +L       + MP+  N + W  ++G     + R TE      +ML E
Sbjct: 253 CKQLVYACRVFHGMPVR-NDVTWSALIGGFVLCD-RMTEAFNLFKDMLVE 300



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 53/99 (53%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++  G A +  +CN+LI++Y + G +  + ++FD+MP R+ VSW  +++GY
Sbjct: 425 QHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGY 484

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G+  EA  +F  M   GF  +      ++ AC   G
Sbjct: 485 GIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSG 523


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 253/717 (35%), Positives = 408/717 (56%), Gaps = 22/717 (3%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMN----------GLMEGRRKGKEVHGYLIR 284
           +AL+  ++ LG F+ A  ++  M++  V                +   R G+ +H +   
Sbjct: 69  NALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAA 128

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
           +GL   + V   L+++Y +C     +R+VF  M  +D V+WN M++G   +G Y  AI +
Sbjct: 129 AGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAH 188

Query: 345 FCAMRRDGLMSSNFS-LISTLSSCASLGWIMLGQQIHGEGLKLGLDSD---VSVSNALLS 400
              M+  G +  N S L+S L   A  G +  G  IH   L+  L+ +   V +  ALL 
Sbjct: 189 LLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLD 248

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS-PNG 459
           +YA    L    +VF  MP  + V+W+++IG F   + + +EA   + DM   G    + 
Sbjct: 249 MYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM-TEAFNLFKDMLVEGLCFLSA 307

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
            +  + L   +S +   +G Q+HA + K  +  + T  N+LLS Y K G +++    F  
Sbjct: 308 TSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDE 367

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR-GQRLDHFTFATVLSACASVATLE 578
           ++ + D +S+ +++SG + N    +A  LV+  MQ      D  T  +++ AC+ +A L+
Sbjct: 368 IAVK-DTISYGALLSGCVQNGKAEEAF-LVFKKMQACNMEPDIATMVSLIPACSHLAALQ 425

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
            G   H   +   L  +  I ++L+DMY+KCG+ID + + FD MP R+V SWN+MI+GY 
Sbjct: 426 HGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYG 485

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
            HG G +A TLF  MK  G  PD VTF+ +++ACSH+GLV EG   F +M+  YG++P++
Sbjct: 486 IHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRM 545

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
           E + CMVDLL R G LD+  +FI  MP+  +  +W  +LGA CR + +  +LG++ + ++
Sbjct: 546 EHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGA-CRIH-KNIDLGKQVSRII 603

Query: 759 FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
            ++ P+   N+VLL+N++++ G++++ A+ R   K    KK  G SW+ +   +H FV G
Sbjct: 604 QKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGG 663

Query: 819 DESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VL 877
           D+SHP    IY +L  +   ++  GY   T F L DLE E KE  + YHSEK+A+AF VL
Sbjct: 664 DQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVL 723

Query: 878 TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           + N    I + KNLRVCGDCH+A K+++ +  R I++RD+NRFHHF +G+CSCG++W
Sbjct: 724 SLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 138/562 (24%), Positives = 251/562 (44%), Gaps = 62/562 (11%)

Query: 30  YVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYAL 89
           ++  G LA A ++FD +P  ++ ++  ++  Y+  G  + A  +++ M+R     N+Y  
Sbjct: 44  HISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTF 103

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
             VL+AC        + G  +H     +    D  VS  LI +Y  C      AR +F +
Sbjct: 104 PFVLKACSAL--VDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGP-ARNVFAK 160

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSS 207
           +  RD+++WN++++ Y+  G           MQ  G    L+PN  T  SL+   A + +
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHG---GLRPNASTLVSLLPLLAQHGA 217

Query: 208 VLSGS----YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
           +  G+    Y L+  L   ++  L     +G+AL+  +A+     YA ++F  M  +N V
Sbjct: 218 LFQGTSIHAYCLRACLEQNEEQVL-----IGTALLDMYAKCKQLVYACRVFHGMPVRNDV 272

Query: 264 SMNGLMEG------------------------------------------RRKGKEVHGY 281
           + + L+ G                                             G ++H  
Sbjct: 273 TWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHAL 332

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           + +SG+   +   N L++MYAK G I+++   F  +  KD++S+  ++SG  QNG  EEA
Sbjct: 333 IAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEA 392

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
            + F  M+   +     +++S + +C+ L  +  G+  HG  +  GL  + S+ N+L+ +
Sbjct: 393 FLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDM 452

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           YA  G +    +VF  MP  D VSWN++I  +     L  EA   +L M+  G++P+ VT
Sbjct: 453 YAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYG-IHGLGKEATTLFLGMKNQGFAPDDVT 511

Query: 462 FINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           FI ++AA S   +   G H       KY +         ++    + G +D+  +    M
Sbjct: 512 FICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSM 571

Query: 521 SERRDEVSWNSMISG-YIHNEL 541
             + D   W +++    IH  +
Sbjct: 572 PLKADVRVWGALLGACRIHKNI 593



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 231/465 (49%), Gaps = 14/465 (3%)

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G +  +R VF  +   D+ ++N +I      G +  AI  + +M R  +  + ++    L
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +C++L  +  G+ IH      GL +D+ VS AL+ LY           VF  MP  D V
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMR-RAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           +WN+++  +A+   +   A+ + LDM+   G  PN  T +++L   +       G  +HA
Sbjct: 168 AWNAMLAGYAN-HGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHA 226

Query: 484 QVIKYNVAN---ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
             ++  +     +  I  ALL  Y KC ++    ++F  M  R D V+W+++I G++  +
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRND-VTWSALIGGFVLCD 285

Query: 541 LLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
            + +A NL   M+  G   L   + A+ L  CAS+A L  G ++HA   ++ +  D+   
Sbjct: 286 RMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTAS 345

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           ++L+ MY+K G I+ A+ FFD + V++  S+ +++SG  ++G  ++A  +F +M+     
Sbjct: 346 NSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNME 405

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           PD  T V ++ ACSH   +  G     S+  + GL  +    + ++D+  + G++D   +
Sbjct: 406 PDIATMVSLIPACSHLAALQHGKCSHGSVI-IRGLALETSICNSLIDMYAKCGKIDLSRQ 464

Query: 720 FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ 764
             +KMP   + + W T++     A      LG++A  +   M+ Q
Sbjct: 465 VFDKMP-ARDVVSWNTMI-----AGYGIHGLGKEATTLFLGMKNQ 503



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 203/464 (43%), Gaps = 53/464 (11%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G   D+F+   LI++Y+R      A  +F +MP R+ V+W  +++GY + GM + A    
Sbjct: 130 GLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHL 189

Query: 75  KEMV-RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCL--VLKSNQTFDGLVSNVLIA 131
            +M    G   N   L S+L    + G       +  +CL   L+ N+    L+   L+ 
Sbjct: 190 LDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEE-QVLIGTALLD 248

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY  C +    A R+F  +  R+ ++W+++I  +         F LF  M  EG  + L 
Sbjct: 249 MYAKCKQLV-YACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCF-LS 306

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
                    + A+ + +  G+    Q+ A++ K+G+ +DL   ++L+S +A+ G    A 
Sbjct: 307 ATSVASALRVCASLADLHMGT----QLHALIAKSGIHADLTASNSLLSMYAKAGLINEAT 362

Query: 252 KIFEQMIQKNVVSMNGLMEG---------------------------------------- 271
             F+++  K+ +S   L+ G                                        
Sbjct: 363 MFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLA 422

Query: 272 -RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
             + GK  HG +I  GL    ++ N L++MYAKCG ID SR VF  M  +D VSWNTMI+
Sbjct: 423 ALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIA 482

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IHGEGLKLGLD 389
           G   +G  +EA   F  M+  G    + + I  +++C+  G +  G+        K G+ 
Sbjct: 483 GYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGIL 542

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
             +     ++ L A  G L    +    MP + D   W +++GA
Sbjct: 543 PRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGA 586



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 144/320 (45%), Gaps = 28/320 (8%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  I K G   D+   N+L+++Y + G +  A+  FDE+  ++++S+  ++SG    G 
Sbjct: 329 LHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGK 388

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           + EA  +FK+M       +   + S++ AC     +  + G   H  V+      +  + 
Sbjct: 389 AEEAFLVFKKMQACNMEPDIATMVSLIPACSHL--AALQHGKCSHGSVIIRGLALETSIC 446

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI MY  C    D +R++F+++  RD++SWN++I+ Y   G       LF  M+ +GF
Sbjct: 447 NSLIDMYAKC-GKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGF 505

Query: 187 RYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                P++ TF  LI A   S  V  G +       M  K G+L  +     +V   AR 
Sbjct: 506 ----APDDVTFICLIAACSHSGLVTEGKHWFD---TMTHKYGILPRMEHYICMVDLLARG 558

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------GKEVHGYLIRSGLFDMVAVGNG- 296
           G    A +  + M  K  V + G + G  +       GK+V   + + G       G G 
Sbjct: 559 GLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLG-----PEGTGN 613

Query: 297 ---LVNMYAKCGTIDDSRSV 313
              L N+++  G  D++  V
Sbjct: 614 FVLLSNIFSAAGRFDEAAEV 633



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 134/290 (46%), Gaps = 17/290 (5%)

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
           H+  +  I Y V ++   +  L     + G++    ++F R+    D  ++N++I  Y  
Sbjct: 20  HRPPSGSISYEVKDKKQWQQELEQHISR-GQLALARQVFDRIPAP-DARAYNALIRAYSW 77

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
                 A++L   M++     + +TF  VL AC+++  L  G  +HA    A L  D+ +
Sbjct: 78  LGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFV 137

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            +AL+D+Y +C R   A   F  MP+R+V +WN+M++GYA HG    A+     M+  G 
Sbjct: 138 STALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGG 197

Query: 659 L-PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF-------SCMVDLLGR 710
           L P+  T V +L   +  G + +G     +    Y L   LEQ        + ++D+  +
Sbjct: 198 LRPNASTLVSLLPLLAQHGALFQG-----TSIHAYCLRACLEQNEEQVLIGTALLDMYAK 252

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
             +L       + MP+  N + W  ++G     + R TE      +ML E
Sbjct: 253 CKQLVYACRVFHGMPVR-NDVTWSALIGGFVLCD-RMTEAFNLFKDMLVE 300



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 53/99 (53%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++  G A +  +CN+LI++Y + G +  + ++FD+MP R+ VSW  +++GY
Sbjct: 425 QHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGY 484

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G+  EA  +F  M   GF  +      ++ AC   G
Sbjct: 485 GIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSG 523


>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 256/710 (36%), Positives = 405/710 (57%), Gaps = 34/710 (4%)

Query: 235 SALVSGFARLGNFYYARKIFEQ--MIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA 292
           S  ++ +AR G   +ARK+F++  +  + V S N ++    + ++    L+   LF+ + 
Sbjct: 26  SYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALL---LFEKMP 82

Query: 293 VGN-----GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
             N     GL++ + K G + ++R VF  M  ++ VSW +M+ G  +NG   EA   F  
Sbjct: 83  QRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWH 142

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M    ++S    L   L      G +   +++      +  + DV     ++  Y + G 
Sbjct: 143 MPHKNVVSWTVMLGGLLQE----GRVDDARKL----FDMMPEKDVVAVTNMIGGYCEEGR 194

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           L     +F  MP+ + V+W +++  +A +   V  A K +  M       N V++  +L 
Sbjct: 195 LDEARALFDEMPKRNVVTWTAMVSGYARN-GKVDVARKLFEVMPER----NEVSWTAMLL 249

Query: 468 AAS-SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
             + S  M +      A  +K        + N ++  +G  GE+D   ++F  M ER D 
Sbjct: 250 GYTHSGRMREASSLFDAMPVK-----PVVVCNEMIMGFGLNGEVDKARRVFKGMKER-DN 303

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
            +W++MI  Y       +A+ L   M + G  L+  +  +VLS C S+A+L+ G +VHA 
Sbjct: 304 GTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQ 363

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            VR+  + D+ + S L+ MY KCG +  A + F+  P+++V  WNSMI+GY++HG G++A
Sbjct: 364 LVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEA 423

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           L +F  M   G  PD VTF+GVLSACS++G V EG + F++M   Y + P +E ++C+VD
Sbjct: 424 LNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVD 483

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           LLGRA ++++  + + KMP+ P++++W  +LGA CR +  K +L   A   L ++EP+NA
Sbjct: 484 LLGRADQVNEAMKLVEKMPMEPDAIVWGALLGA-CRTHM-KLDLAEVAVEKLAQLEPKNA 541

Query: 767 VNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD-ESHPEK 825
             YVLL+NMYA  G+W DV   R+ +K   V K  GCSW+ ++  VH+F  GD + HPE+
Sbjct: 542 GPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQ 601

Query: 826 DLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LP 884
            +I + L++L   +R+AGY P   F L D++ E K   + YHSEK+AVA+ L +  + +P
Sbjct: 602 PIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMP 661

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           IR+MKNLRVCGDCHSA K I+K+ GREI+LRD+NRFHHF DG CSC DYW
Sbjct: 662 IRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 216/460 (46%), Gaps = 57/460 (12%)

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-QREG 185
           N ++A Y    +  + A  +FE++  R+ +SWN +IS + + G      ++F  M  R  
Sbjct: 59  NAMVAAYFEARQPRE-ALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNV 117

Query: 186 FRYSLKPNEYTFGSLITAA--------YSSVLSGSYLLQQIL--AMVKKAGLL------S 229
             ++     Y     +  A        + +V+S + +L  +L    V  A  L       
Sbjct: 118 VSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEK 177

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-RRKGK--------EV-- 278
           D+   + ++ G+   G    AR +F++M ++NVV+   ++ G  R GK        EV  
Sbjct: 178 DVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMP 237

Query: 279 ---------------HGYLIR--SGLFDM-----VAVGNGLVNMYAKCGTIDDSRSVFRF 316
                          H   +R  S LFD      V V N ++  +   G +D +R VF+ 
Sbjct: 238 ERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKG 297

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M  +D+ +W+ MI   ++ G   EA+  F  M+R+GL  +  SLIS LS C SL  +  G
Sbjct: 298 MKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHG 357

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +Q+H + ++   D D+ V++ L+++Y   G L R  +VF   P  D V WNS+I  ++  
Sbjct: 358 KQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYS-Q 416

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-IKYNVANETT 495
             L  EA+  + DM  +G  P+ VTFI +L+A S     K G ++   +  KY V  E  
Sbjct: 417 HGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQV--EPG 474

Query: 496 IEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           IE+   L+   G+  ++++  K+  +M    D + W +++
Sbjct: 475 IEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALL 514



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 206/445 (46%), Gaps = 54/445 (12%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N LI+ +++ G L+ A ++FD MPDRN VSW  +V GY   G   EA ++F  M     +
Sbjct: 90  NGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVV 149

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY----GSCLES 139
                LG +L+  +                V  + + FD +    ++A+     G C E 
Sbjct: 150 SWTVMLGGLLQEGR----------------VDDARKLFDMMPEKDVVAVTNMIGGYCEEG 193

Query: 140 T-DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-QREGFRYSLKPNEYTF 197
             D AR +F+E+  R++++W +++S Y++ G      KLF  M +R    ++     YT 
Sbjct: 194 RLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTH 253

Query: 198 GSLITAAYSSVLSGSYLLQQIL--AMVKKAGLLSD------LYVG---------SALVSG 240
              +  A SS+     +   ++   M+   GL  +      ++ G         SA++  
Sbjct: 254 SGRMREA-SSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKV 312

Query: 241 FARLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRRKGKEVHGYLIRSGLFDM 290
           + R G    A  +F +M ++          +V+S+   +     GK+VH  L+RS     
Sbjct: 313 YERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQD 372

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           + V + L+ MY KCG +  ++ VF     KD V WN+MI+G  Q+G  EEA+  F  M  
Sbjct: 373 LYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCS 432

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN--ALLSLYADAGYL 408
            G+   + + I  LS+C+  G +  G ++  E +K     +  + +   L+ L   A  +
Sbjct: 433 SGVPPDDVTFIGVLSACSYSGKVKEGLELF-ETMKCKYQVEPGIEHYACLVDLLGRADQV 491

Query: 409 SRCLKVFFLMP-EHDQVSWNSVIGA 432
           +  +K+   MP E D + W +++GA
Sbjct: 492 NEAMKLVEKMPMEPDAIVWGALLGA 516



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 121/288 (42%), Gaps = 68/288 (23%)

Query: 494 TTIENALLSCYGKCGEMDDCEKIF----------------------ARMSE--------- 522
           TT  +  ++CY + G++D   K+F                      AR            
Sbjct: 22  TTSSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKM 81

Query: 523 -RRDEVSWNSMISGYIHNELLPKA---------MNLV-WFMMQRG----------QRLD- 560
            +R+ VSWN +ISG+I N +L +A          N+V W  M RG          +RL  
Sbjct: 82  PQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFW 141

Query: 561 HFTFATVLSACASV-ATLERGMEVHACGVRACL-EFDVVIGSALVDMYSKCGRIDYASRF 618
           H     V+S    +   L+ G    A  +   + E DVV  + ++  Y + GR+D A   
Sbjct: 142 HMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARAL 201

Query: 619 FDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLV 678
           FD MP RNV +W +M+SGYAR+G  D A  LF  M    P  + V++  +L   +H+G +
Sbjct: 202 FDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVM----PERNEVSWTAMLLGYTHSGRM 257

Query: 679 DEGFKHFKSMSQVYGLIPQLEQFSC--MVDLLGRAGELDKIEEFINKM 724
            E    F +M       P      C  M+   G  GE+DK       M
Sbjct: 258 REASSLFDAM-------PVKPVVVCNEMIMGFGLNGEVDKARRVFKGM 298



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 53/97 (54%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H Q+++  F  D+++ + LI +YV+ G+L  A ++F+  P ++ V W  +++GY+ 
Sbjct: 357 GKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQ 416

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G+  EA  +F +M  +G   +      VL AC   G
Sbjct: 417 HGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSG 453


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 256/698 (36%), Positives = 394/698 (56%), Gaps = 43/698 (6%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK-----DSVSWNTMIS 330
           K++H  +I++GL + V V + L++  A   + D S ++  F   +     +   WN++I 
Sbjct: 45  KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIR 104

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           G   +     ++  F  M   G+  ++ +      SC        G+Q+H   LKL L  
Sbjct: 105 GYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHF 164

Query: 391 DVSVSNALLSLYAD--------------------------AGYLSR-CL----KVFFLMP 419
           +  V  +++ +YA                            GY+S+ CL    ++F  +P
Sbjct: 165 NPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIP 224

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             D VSWN++I  +  S     EA+  + +M+ A   PN  T + +L+A      G+LG 
Sbjct: 225 VKDVVSWNAMISGYVQS-GRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGK 283

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
            + + V      +   + NAL+  Y KCGE D   ++F  + E +D +SWN+MI GY + 
Sbjct: 284 WIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGI-EEKDVISWNTMIGGYSYL 342

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF-DVVI 598
            L  +A+ L   M++   + +  TF  +L ACA +  L+ G  VHA   +      +  +
Sbjct: 343 SLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASL 402

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            ++L+DMY+KCG I+ A R F  M  RN+ SWN+M+SG+A HGH ++AL LFS+M   G 
Sbjct: 403 WTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGL 462

Query: 659 L-PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
             PD +TFVGVLSAC+ AGLVD G ++F+SM Q YG+ P+L+ + CM+DLL RA + ++ 
Sbjct: 463 FRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEA 522

Query: 718 EEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYA 777
           E  +  M + P+  IW ++L AC +A+ R  E G   A  LF++EP+NA  +VLL+N+YA
Sbjct: 523 EILMKNMEMEPDGAIWGSLLSAC-KAHGR-VEFGEYVAERLFQLEPENAGAFVLLSNIYA 580

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
             G+W+DVA+ R  + +  +KK  GC+ + +   VH F+ GD+ HPE + IY+ L E+++
Sbjct: 581 GAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDK 640

Query: 838 KMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGD 896
            + + G+VP T   L+D++ E KE  +S HSEK+A++F L +      IRI+KNLRVCG+
Sbjct: 641 LLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGN 700

Query: 897 CHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CHSA K ISKI  REI+ RD NRFHHF DG CSC D W
Sbjct: 701 CHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 166/607 (27%), Positives = 279/607 (45%), Gaps = 85/607 (14%)

Query: 83  LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC 142
           +L ++   ++L  C+    + FK   Q+H L++K+       V + LI  + +   S D 
Sbjct: 25  ILEQHPYLNLLEKCKNI--NTFK---QIHSLIIKTGLNNTVFVQSKLIH-FCAVSPSGDL 78

Query: 143 --ARRIFEEIETR---DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
             A  +FEE +     ++  WNS+I  YS     +S   LFSRM      Y ++PN +TF
Sbjct: 79  SYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRM----LYYGVQPNSHTF 134

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
             L  +   +    ++  +Q+ A   K  L  + +V ++++  +A +G   +AR +F++ 
Sbjct: 135 PFLFKSCTKA--KATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKS 192

Query: 258 IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
             ++ VS   L+ G                             Y   G +DD+R +F  +
Sbjct: 193 SLRDAVSFTALITG-----------------------------YVSQGCLDDARRLFDEI 223

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             KD VSWN MISG  Q+G +EEAI+ F  M+   ++ +  +++  LS+C       LG+
Sbjct: 224 PVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGK 283

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
            I       G  S++ ++NAL+ +Y   G      ++F  + E D +SWN++IG ++   
Sbjct: 284 WIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYS-YL 342

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANET--T 495
           +L  EA+  +  M R+   PN VTF+ IL A +      LG  VHA + K N+ N +  +
Sbjct: 343 SLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDK-NLRNSSNAS 401

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           +  +L+  Y KCG ++  E++F  M   R+  SWN+M+SG+  +    +A+ L   M+ +
Sbjct: 402 LWTSLIDMYAKCGCIEAAERVFRSM-HSRNLASWNAMLSGFAMHGHAERALALFSEMVNK 460

Query: 556 GQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
           G  R D  TF  VLSAC                            + LVD+    G   +
Sbjct: 461 GLFRPDDITFVGVLSACTQ--------------------------AGLVDL----GHQYF 490

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
            S   D      +  +  MI   AR    ++A  L   M+++   PD   +  +LSAC  
Sbjct: 491 RSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEME---PDGAIWGSLLSACKA 547

Query: 675 AGLVDEG 681
            G V+ G
Sbjct: 548 HGRVEFG 554



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 187/401 (46%), Gaps = 40/401 (9%)

Query: 26  LINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLN 85
           LI  YV  G L  A +LFDE+P ++ VSW  ++SGY   G   EA   F EM  A  L N
Sbjct: 203 LITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPN 262

Query: 86  RYALGSVLRAC--QECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           +  +  VL AC     G  G   G  V      SN      ++N LI MY  C E TD A
Sbjct: 263 KSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQ----LTNALIDMYCKCGE-TDIA 317

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           R +F+ IE +D+ISWN++I  YS          LF  M     R ++KPN+ TF  ++ A
Sbjct: 318 RELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVM----LRSNVKPNDVTFLGILHA 373

Query: 204 AYSSVLSGSYLLQQILAMV-KKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
              + L    L + + A + K     S+  + ++L+  +A+ G    A ++F  M  +N+
Sbjct: 374 C--ACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNL 431

Query: 263 VSMNGLMEG------RRKGKEVHGYLIRSGLF---DMVAVGNGLVNMYAKCGTIDDSRSV 313
            S N ++ G        +   +   ++  GLF   D+  V  G+++   + G +D     
Sbjct: 432 ASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFV--GVLSACTQAGLVDLGHQY 489

Query: 314 FRFMIGKDSVS-----WNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSS 366
           FR MI    +S     +  MI  L +   +EEA  +M    M  DG +       S LS+
Sbjct: 490 FRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWG-----SLLSA 544

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAG 406
           C + G +  G+ +  E L   L+ + + +  LLS +YA AG
Sbjct: 545 CKAHGRVEFGEYV-AERL-FQLEPENAGAFVLLSNIYAGAG 583



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 143/600 (23%), Positives = 236/600 (39%), Gaps = 127/600 (21%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLIN--VYVRVGDLASASKLFDEMPDR---NSVSWACIVS 59
           K  H  I+K G    VF+ + LI+       GDL+ A  LF+E       N   W  ++ 
Sbjct: 45  KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIR 104

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           GY+       +  +F  M+  G   N +    + ++C +   +    G Q+H   LK   
Sbjct: 105 GYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKAT--HEGKQLHAHALKLAL 162

Query: 120 TFDGLVSNVLIAMYGSCLE------------------------------STDCARRIFEE 149
            F+  V   +I MY S  E                                D ARR+F+E
Sbjct: 163 HFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDE 222

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
           I  +D++SWN++IS Y Q G        F  MQ      ++ PN+ T   ++ +A     
Sbjct: 223 IPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEA----NVLPNKSTM-VVVLSACGHTR 277

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
           SG  L + I + V+  G  S+L + +AL+  + + G    AR++F+ + +K+V+S N ++
Sbjct: 278 SGE-LGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMI 336

Query: 270 EGRRK-----------------------------------------GKEVHGYL---IRS 285
            G                                            GK VH Y+   +R+
Sbjct: 337 GGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRN 396

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
                 ++   L++MYAKCG I+ +  VFR M  ++  SWN M+SG   +G  E A+  F
Sbjct: 397 S--SNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALF 454

Query: 346 CAMRRDGLM-SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
             M   GL    + + +  LS+C   G + LG Q     ++     D  +S  L      
Sbjct: 455 SEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQ-----DYGISPKLQHYGCM 509

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
              L+R  K                   F ++E L          M+     P+G  + +
Sbjct: 510 IDLLARAEK-------------------FEEAEIL----------MKNMEMEPDGAIWGS 540

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS-CYGKCGEMDDCEKIFARMSER 523
           +L+A  +    + G  V  ++ +    N       LLS  Y   G  DD  +I  R++++
Sbjct: 541 LLSACKAHGRVEFGEYVAERLFQLEPENAGAF--VLLSNIYAGAGRWDDVARIRTRLNDK 598


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/673 (36%), Positives = 381/673 (56%), Gaps = 39/673 (5%)

Query: 275 GKEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDS-------RSVFRFMIGKD-SVSW 325
           G+ +HGY+IR GL FD+   GN L+NMY+K   +  S         V   M  +  SV  
Sbjct: 127 GESLHGYIIRVGLDFDLY-TGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRT 185

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI--STLSSCASLGWIMLGQQIHGEG 383
            +++ G       +    N+    R     +    I     S    +    LGQQI    
Sbjct: 186 ASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDIS 245

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
             + +DS                      K+F +MPE D VSWN++I   A +  L  E 
Sbjct: 246 HSMSVDS--------------------VRKIFEMMPEKDLVSWNTIIAGNARN-GLYGET 284

Query: 444 VKYYLDMRRAGWSPNGVTFINILA-AASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           +    +M  A   P+  T  ++L   A +  + K G ++H   I+  +  E  + ++L+ 
Sbjct: 285 LTMVREMGGANLKPDSFTLSSVLPLIAENVDISK-GKEIHGCSIRQGLDAEVYVASSLID 343

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            Y KC  + D  ++F  ++ER D +SWNS+I+G + N L  + +     M+    +   +
Sbjct: 344 MYAKCTRVVDSYRVFTLLTER-DGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSY 402

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           +F++++ ACA + TL  G ++H    R   + ++ I S+LVDMY+KCG I  A + FD M
Sbjct: 403 SFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRM 462

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
            +R++ SW +MI G A HGH   A+ LF QMK +G  P++V F+ VL+ACSHAGLVDE +
Sbjct: 463 RLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAW 522

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
           K+F SM+  +G+ P +E ++ + DLLGRAG L++  +FI  MPI P   +W T+L A CR
Sbjct: 523 KYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSA-CR 581

Query: 743 ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
            + +  ++  K AN + E++P+N   Y+LLAN+Y++  +W++ AK R +++   ++K   
Sbjct: 582 VH-KNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPA 640

Query: 803 CSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKED 862
           CSW+ +++ V+ F+AGDESHP  + I E ++ L + M   GYVP T     D+E E K+ 
Sbjct: 641 CSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEGYVPDTSEVHHDVEEEQKKY 700

Query: 863 LVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFH 921
           LV  HSE++A+ F ++   +   IR+ KNLRVC DCH+A KFISKIVGREIV+RD++RFH
Sbjct: 701 LVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFH 760

Query: 922 HFNDGKCSCGDYW 934
           HF +G CSCGDYW
Sbjct: 761 HFKNGTCSCGDYW 773



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 149/543 (27%), Positives = 248/543 (45%), Gaps = 57/543 (10%)

Query: 145 RIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA 204
           R+F  +     ++W S+I  Y+  G        F  M   G    L P+   F S++ A 
Sbjct: 63  RLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASG----LYPDHNVFPSVLKAC 118

Query: 205 YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV-----------SGFARLGNFYYARKI 253
             ++L    L + +   + + GL  DLY G+AL+           SG  RLG    A ++
Sbjct: 119 --AMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLG----ASQV 172

Query: 254 FEQMIQK--NVVSMNGLM--EGRR-------------KGKEVHG------YLIRSGLFDM 290
            ++M ++  +V + + L+  +GR+             + +E         Y  RS   +M
Sbjct: 173 LDEMTERTRSVRTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREM 232

Query: 291 VAVGNGL-VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
            A   G  +   +   ++D  R +F  M  KD VSWNT+I+G  +NG Y E +     M 
Sbjct: 233 EACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMG 292

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
              L   +F+L S L   A    I  G++IHG  ++ GLD++V V+++L+ +YA    + 
Sbjct: 293 GANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVV 352

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
              +VF L+ E D +SWNS+I     +  L  E +K++  M  A   P   +F +I+ A 
Sbjct: 353 DSYRVFTLLTERDGISWNSIIAGCVQN-GLFDEGLKFFRQMLMAKIKPKSYSFSSIMPAC 411

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
           +  +   LG Q+H  + +        I ++L+  Y KCG +    +IF RM   RD VSW
Sbjct: 412 AHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRM-RLRDMVSW 470

Query: 530 NSMISG-YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
            +MI G  +H   L  A+ L   M   G   ++  F  VL+AC+    ++   +      
Sbjct: 471 TAMIMGCALHGHAL-DAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNS-- 527

Query: 589 RACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYARHGHG 643
              L+F +  G    +A+ D+  + GR++ A  F   MP+    S W +++S    H + 
Sbjct: 528 -MTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNV 586

Query: 644 DKA 646
           D A
Sbjct: 587 DMA 589



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 236/499 (47%), Gaps = 44/499 (8%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H Q+LK   A  +   + L+++Y  +  L  + +LF+ +    +++W  ++  YT 
Sbjct: 27  AQQLHAQVLKFQ-ASSLCNLSLLLSIYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTS 85

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+ +++   F  M+ +G   +     SVL+AC          G  +H  +++    FD 
Sbjct: 86  HGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAML--MDLNLGESLHGYIIRVGLDFDL 143

Query: 124 LVSNVLIAMYGSC--LESTDCAR----RIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
              N L+ MY     L+ +   R    ++ +E+  R      + + V +Q G  +S  + 
Sbjct: 144 YTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVGNQ-GRKVSDIEA 202

Query: 178 FS--------RMQREGFRYSLKP-NEY------TFGSLITAAYSSVLSGSYLLQQILAMV 222
           F+          + +      KP +EY        G  I     S+   S  +++I  M+
Sbjct: 203 FNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHSMSVDS--VRKIFEMM 260

Query: 223 KKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLME------GR 272
            +     DL   + +++G AR G +     +  +M    ++ +  +++ ++         
Sbjct: 261 PE----KDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDI 316

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
            KGKE+HG  IR GL   V V + L++MYAKC  + DS  VF  +  +D +SWN++I+G 
Sbjct: 317 SKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGC 376

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            QNG ++E +  F  M    +   ++S  S + +CA L  + LG+Q+HG   + G D ++
Sbjct: 377 VQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENI 436

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI-GAFADSEALVSEAVKYYLDMR 451
            ++++L+ +YA  G +    ++F  M   D VSW ++I G      AL  +A++ +  M+
Sbjct: 437 FIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHAL--DAIELFEQMK 494

Query: 452 RAGWSPNGVTFINILAAAS 470
             G  PN V F+ +L A S
Sbjct: 495 TEGIEPNYVAFMAVLTACS 513



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 56/96 (58%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  I ++GF  ++F+ ++L+++Y + G++ +A ++FD M  R+ VSW  ++ G    
Sbjct: 421 KQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALH 480

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G + +A ++F++M   G   N  A  +VL AC   G
Sbjct: 481 GHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAG 516



 Score = 42.7 bits (99), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 32/69 (46%)

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
           +YS    +  + R F+ +      +W S+I  Y  HG   K+L  F  M   G  PDH  
Sbjct: 51  IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110

Query: 665 FVGVLSACS 673
           F  VL AC+
Sbjct: 111 FPSVLKACA 119


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 230/639 (35%), Positives = 368/639 (57%), Gaps = 6/639 (0%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           LVN  +  G +  +R +F      D   WN ++    ++G +  AI  +  M+   +   
Sbjct: 113 LVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPD 172

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
            FS    L +C++L  + +G+++HG+  + G +SDV V N L++LYA  G + R   VF 
Sbjct: 173 GFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFG 232

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            + +   VSW S+I  +A +   + EA++ + +MR+    P+ +  +++L A +     +
Sbjct: 233 RLVDRTIVSWTSIISGYAQNGQPI-EALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLE 291

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY 536
            G  +H  VIK  +  E  +  +L S Y KCG +    ++F    E    + WN+MISGY
Sbjct: 292 HGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVM-VARLFFNQVENPSLIFWNAMISGY 350

Query: 537 IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
           + N    +A+ L   M  +  R D  T  + ++ACA + +LE    +      +    DV
Sbjct: 351 VKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDV 410

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
           ++ ++L+D Y+KCG +D A   FD +P ++V  W++M+ GY  HG G +++ LF  M+  
Sbjct: 411 IVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQA 470

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
           G  P+ VTFVG+L+AC ++GLV+EG+  F  M   YG+ P+ + ++C+VDLLGRAG LD+
Sbjct: 471 GVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRD-YGIEPRHQHYACVVDLLGRAGHLDR 529

Query: 717 IEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMY 776
              F+  MPI P   +W  +L AC     R   LG  AA  LF ++P N  +YV L+N+Y
Sbjct: 530 AYNFVMNMPIEPGVSVWGALLSAC--KIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLY 587

Query: 777 ASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELN 836
           AS   W+ VAK R  M+E  + K  G S + +   +  F AGD++HP    I+E++++L 
Sbjct: 588 ASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLE 647

Query: 837 QKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCG 895
           +++++AG+VP T+  L DL  E  E+ +  HSE++A+A+ +++      +RI KNLR C 
Sbjct: 648 RRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACD 707

Query: 896 DCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +CH+A K ISK+V REIV+RD+ RFHHF DG CSCGDYW
Sbjct: 708 NCHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 187/365 (51%), Gaps = 12/365 (3%)

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
            QI+ + L  GL     +   L++  ++ G +S   K+F   P+ D   WN+++  ++  
Sbjct: 92  NQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYS-R 150

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
                 A++ Y  M+ A  SP+G +F  +L A S+    ++G +VH Q+ ++   ++  +
Sbjct: 151 HGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFV 210

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
           +N L++ Y KCGE+     +F R+ + R  VSW S+ISGY  N    +A+ +   M +  
Sbjct: 211 QNGLVALYAKCGEIVRANAVFGRLVD-RTIVSWTSIISGYAQNGQPIEALRIFSEMRKTN 269

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACL--EFDVVIGSALVDMYSKCGRIDY 614
            R D     +VL A   V  LE G  +H C ++  L  EFD++I  +L  +Y+KCG +  
Sbjct: 270 VRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLI--SLTSLYAKCGHVMV 327

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
           A  FF+ +   ++  WN+MISGY ++G+ ++A+ LF  MK     PD +T    ++AC+ 
Sbjct: 328 ARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQ 387

Query: 675 AGLVD--EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI 732
            G ++       + SMS+       +   + ++D   + G +D      +++P   + ++
Sbjct: 388 IGSLELARWMDEYISMSEFRN---DVIVNTSLIDTYAKCGSVDMARFVFDRIP-DKDVVV 443

Query: 733 WRTVL 737
           W  ++
Sbjct: 444 WSAMM 448



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 210/427 (49%), Gaps = 17/427 (3%)

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL-----------MEGRRKGKE 277
            D+++ +A+V  ++R G F +A +++ +M Q   VS +G            +     G+ 
Sbjct: 136 PDVFLWNAIVRCYSRHGFFGHAIEMYARM-QVACVSPDGFSFPCVLKACSALPALEMGRR 194

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VHG + R G    V V NGLV +YAKCG I  + +VF  ++ +  VSW ++ISG  QNG 
Sbjct: 195 VHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQ 254

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
             EA+  F  MR+  +     +L+S L +   +  +  G+ IHG  +K+GL+ +  +  +
Sbjct: 255 PIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLIS 314

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQ-VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           L SLYA  G++    ++FF   E+   + WN++I  +  +     EA++ +  M+     
Sbjct: 315 LTSLYAKCGHV-MVARLFFNQVENPSLIFWNAMISGYVKN-GYAEEAIELFRLMKSKNIR 372

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P+ +T  + +AA +     +L   +   +      N+  +  +L+  Y KCG +D    +
Sbjct: 373 PDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFV 432

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F R+ + +D V W++M+ GY  +    +++ L   M Q G   +  TF  +L+AC +   
Sbjct: 433 FDRIPD-KDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGL 491

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMIS 635
           +E G ++        +E      + +VD+  + G +D A  F   MP+   V  W +++S
Sbjct: 492 VEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLS 551

Query: 636 GYARHGH 642
               H H
Sbjct: 552 ACKIHRH 558



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 204/465 (43%), Gaps = 51/465 (10%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           ++L  G  Y  FL   L+N    +G+++ A KLFD+ PD +   W  IV  Y+  G    
Sbjct: 97  KLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGH 156

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
           A +M+  M  A    + ++   VL+AC        + G +VH  + +     D  V N L
Sbjct: 157 AIEMYARMQVACVSPDGFSFPCVLKACSAL--PALEMGRRVHGQIFRHGFESDVFVQNGL 214

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           +A+Y  C E    A  +F  +  R ++SW SIIS Y+Q G  I   ++FS M++   R  
Sbjct: 215 VALYAKCGEIVR-ANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVR-- 271

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
             P+     S++  AY+ V    +  + I   V K GL  +  +  +L S +A+ G+   
Sbjct: 272 --PDWIALVSVLR-AYTDVEDLEH-GKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMV 327

Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRK----------------------------------- 274
           AR  F Q+   +++  N ++ G  K                                   
Sbjct: 328 ARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQ 387

Query: 275 ------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
                  + +  Y+  S   + V V   L++ YAKCG++D +R VF  +  KD V W+ M
Sbjct: 388 IGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAM 447

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           + G   +G   E+I+ F AMR+ G+  ++ + +  L++C + G +  G  +       G+
Sbjct: 448 MVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGI 507

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
           +        ++ L   AG+L R       MP    VS W +++ A
Sbjct: 508 EPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSA 552



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 137/267 (51%), Gaps = 15/267 (5%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H QI +HGF  DVF+ N L+ +Y + G++  A+ +F  + DR  VSW  I+SGY   G  
Sbjct: 196 HGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQP 255

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ--TFDGLV 125
            EA ++F EM +     +  AL SVLRA  +      + G  +H  V+K      FD L+
Sbjct: 256 IEALRIFSEMRKTNVRPDWIALVSVLRAYTDV--EDLEHGKSIHGCVIKMGLECEFDLLI 313

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           S  L ++Y  C      AR  F ++E   LI WN++IS Y + G      +LF  M+ + 
Sbjct: 314 S--LTSLYAKCGHVM-VARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKN 370

Query: 186 FRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
            R    P+  T  S I A A    L  +  + + ++M   +   +D+ V ++L+  +A+ 
Sbjct: 371 IR----PDSITVTSSIAACAQIGSLELARWMDEYISM---SEFRNDVIVNTSLIDTYAKC 423

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG 271
           G+   AR +F+++  K+VV  + +M G
Sbjct: 424 GSVDMARFVFDRIPDKDVVVWSAMMVG 450



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 7/208 (3%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K G   +  L  +L ++Y + G +  A   F+++ + + + W  ++SGY
Sbjct: 291 EHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGY 350

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G + EA ++F+ M       +   + S + AC + G    +    +   +  S    
Sbjct: 351 VKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIG--SLELARWMDEYISMSEFRN 408

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D +V+  LI  Y  C  S D AR +F+ I  +D++ W++++  Y   G       LF  M
Sbjct: 409 DVIVNTSLIDTYAKC-GSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAM 467

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVL 209
           ++ G    + PN+ TF  L+TA  +S L
Sbjct: 468 RQAG----VSPNDVTFVGLLTACKNSGL 491


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 222/572 (38%), Positives = 359/572 (62%), Gaps = 6/572 (1%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           +++CA    +   ++IHG       + D  + N+L+ LY   G +    KVF  M + D 
Sbjct: 58  ITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDM 117

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSW S+I  +A ++ + +EA+     M +  + PNG TF ++L AA +++   +G Q+HA
Sbjct: 118 VSWTSLIAGYAQND-MPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHA 176

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
             +K +   +  + +ALL  Y +CG+MD    +F ++ + ++ VSWN++ISG+       
Sbjct: 177 LAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKL-DSKNGVSWNALISGFARKGDGE 235

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
            A+ +   M + G    HFT++++ S  A +  LE+G  VHA  V++  +    +G+ ++
Sbjct: 236 TALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTML 295

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           DMY+K G +  A + F+ +  +++ +WNSM++ +A++G G +A++ F +M+  G   + +
Sbjct: 296 DMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQI 355

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TF+ +L+ACSH GLV EG KH+  M + Y L P++E +  +VDLLGRAG L+    FI K
Sbjct: 356 TFLCILTACSHGGLVKEG-KHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFK 414

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           MP+ P + +W  +L AC R + +  ++G+ AA+ +F+++P ++   VLL N+YAS G W+
Sbjct: 415 MPMEPTAAVWGALLAAC-RMH-KNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWD 472

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
             A+ RK MK   VKKE  CSWV + + VH+FVA D++HP  + IY+   E++ K+R  G
Sbjct: 473 AAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEG 532

Query: 844 YVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR-NSKLPIRIMKNLRVCGDCHSAFK 902
           YVP   + L  ++ + +E  + YHSEKIA+AF L +  +   IRIMKN+R+CGDCHSAFK
Sbjct: 533 YVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFK 592

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +ISK+  REIV+RD+NRFHHF++G CSCGDYW
Sbjct: 593 YISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 177/370 (47%), Gaps = 9/370 (2%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            +++HG+L  S       + N L+++Y KCG++ ++  VF  M  KD VSW ++I+G  Q
Sbjct: 70  ARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQ 129

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N    EAI     M +     + F+  S L +  +     +G QIH   +K     DV V
Sbjct: 130 NDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYV 189

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA---DSEALVSEAVKYYLDMR 451
            +ALL +YA  G +     VF  +   + VSWN++I  FA   D E     A+  + +M+
Sbjct: 190 GSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGET----ALMVFAEMQ 245

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
           R G+     T+ +I +  +     + G  VHA ++K        + N +L  Y K G M 
Sbjct: 246 RNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMI 305

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
           D  K+F R+   +D V+WNSM++ +    L  +A++    M + G  L+  TF  +L+AC
Sbjct: 306 DARKVFERVLN-KDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTAC 364

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-W 630
           +    ++ G           LE ++     +VD+  + G ++YA  F   MP+    + W
Sbjct: 365 SHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVW 424

Query: 631 NSMISGYARH 640
            ++++    H
Sbjct: 425 GALLAACRMH 434



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/433 (24%), Positives = 201/433 (46%), Gaps = 74/433 (17%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           DA+  H  +    F  D FL N+LI++Y + G +  A K+FD+M  ++ VSW  +++GY 
Sbjct: 69  DARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYA 128

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
              M  EA  +   M++  F  N +   S+L+A      SG   G Q+H L +K +   D
Sbjct: 129 QNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSG--IGGQIHALAVKCDWHED 186

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V + L+ MY  C    D A  +F+++++++ +SWN++IS ++++GD  +   +F+ MQ
Sbjct: 187 VYVGSALLDMYARC-GKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQ 245

Query: 183 REGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           R GF    +   +T+ S+ +  A   ++  G ++      MVK    L+  +VG+ ++  
Sbjct: 246 RNGF----EATHFTYSSIFSGLAGIGALEQGKWVHAH---MVKSRQKLT-AFVGNTMLDM 297

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
           +A+ G+   ARK+FE+++ K++V+ N ++                               
Sbjct: 298 YAKSGSMIDARKVFERVLNKDLVTWNSMLTA----------------------------- 328

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           +A+ G            +GK++VS                   +F  MR+ G+  +  + 
Sbjct: 329 FAQYG------------LGKEAVS-------------------HFEEMRKSGIYLNQITF 357

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP- 419
           +  L++C+  G +  G+       +  L+ ++     ++ L   AG L+  L   F MP 
Sbjct: 358 LCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPM 417

Query: 420 EHDQVSWNSVIGA 432
           E     W +++ A
Sbjct: 418 EPTAAVWGALLAA 430



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 137/305 (44%), Gaps = 15/305 (4%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV++ + L+++Y R G +  A+ +FD++  +N VSW  ++SG+  KG    A  +F EM 
Sbjct: 186 DVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQ 245

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           R GF    +   S+       G    + G  VH  ++KS Q     V N ++ MY     
Sbjct: 246 RNGFEATHFTYSSIFSGL--AGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGS 303

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             D AR++FE +  +DL++WNS+++ ++Q G        F  M++ G    +  N+ TF 
Sbjct: 304 MID-ARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSG----IYLNQITFL 358

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK-IFEQM 257
            ++TA     L      +    M+K+  L  ++     +V    R G   YA   IF+  
Sbjct: 359 CILTACSHGGLVKEG--KHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMP 416

Query: 258 IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRS 312
           ++        L+   R  K    G      +F +    +G    L N+YA  G  D +  
Sbjct: 417 MEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAAR 476

Query: 313 VFRFM 317
           V + M
Sbjct: 477 VRKMM 481



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 53/99 (53%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K       F+ NT++++Y + G +  A K+F+ + +++ V+W  +++ +
Sbjct: 270 EQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAF 329

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G+  EA   F+EM ++G  LN+     +L AC   G
Sbjct: 330 AQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGG 368


>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
 gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 218/514 (42%), Positives = 329/514 (64%), Gaps = 5/514 (0%)

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D+VSWNS+I      E    +A+ ++  MR      +  T  ++L + +S  + +    V
Sbjct: 5   DEVSWNSLILGCV-REGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISV 63

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H  +IK        + NAL+  Y K G++D    +F++M ++ D VSW S+++GY HN  
Sbjct: 64  HCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDK-DVVSWTSLVTGYSHNGS 122

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +A+ L   M   G   D    A+VLSACA +  ++ G ++HA  V++ LE  + + ++
Sbjct: 123 YEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNS 182

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           LV MY+KCG I  A+R FD MP R+V SW ++I GYA++G G  +L  + QM   G  PD
Sbjct: 183 LVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPD 242

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
           ++TF+G+L ACSH GL+  G  +F++M +VYG+ P  E ++CM+DLLGR+G+L + +  +
Sbjct: 243 YITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLL 302

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
           N+M + P++++W+ +L A CR + ++ ELG  AA  LFE+EP N++ YV+L+NMY++ GK
Sbjct: 303 NQMVVAPDAVVWKALLAA-CRVH-KELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGK 360

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           WED A+ R+ M+   + KE G SW+     V  F++ D +HP ++ IY K+ E+   +++
Sbjct: 361 WEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKE 420

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSA 900
           AGYVP   FAL D + E KE  ++YHSEK+AVAF +LT     PIRI KNLRVCGDCH+A
Sbjct: 421 AGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTA 480

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            K+ SK+  R I+LRDSN FHHF +G+CSCGDYW
Sbjct: 481 MKYTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 141/266 (53%), Gaps = 3/266 (1%)

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VH  +I++G      V N L++MYAK G +D +  VF  M+ KD VSW ++++G   NG 
Sbjct: 63  VHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGS 122

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
           YEEAI  FC MR  G+     ++ S LS+CA L  +  GQQIH   +K GL+S +SV N+
Sbjct: 123 YEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNS 182

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+++YA  G +    + F  MP  D +SW ++I  +A +      ++++Y  M   G  P
Sbjct: 183 LVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQN-GRGKHSLQFYDQMIATGTKP 241

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKI 516
           + +TFI +L A S   +   G      + K Y +         ++   G+ G++ + + +
Sbjct: 242 DYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGL 301

Query: 517 FARMSERRDEVSWNSMISG-YIHNEL 541
             +M    D V W ++++   +H EL
Sbjct: 302 LNQMVVAPDAVVWKALLAACRVHKEL 327



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 165/330 (50%), Gaps = 20/330 (6%)

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D VSWN++I G  + G  E+A+  F  MR   +    ++L S L+S AS+  +     +H
Sbjct: 5   DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVH 64

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
              +K G ++   V+NAL+ +YA  G L   + VF  M + D VSW S++  ++ + +  
Sbjct: 65  CLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSY- 123

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
            EA+K +  MR +G  P+ +   ++L+A +  ++   G Q+HA ++K  + +  +++N+L
Sbjct: 124 EEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSL 183

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD 560
           ++ Y KCG + D  + F  M   RD +SW ++I GY  N     ++     M+  G + D
Sbjct: 184 VTMYAKCGSIVDANRAFDNMPT-RDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPD 242

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLE-FDVVIG--------SALVDMYSKCGR 611
           + TF  +L AC+    L  G        RA  E  D V G        + ++D+  + G+
Sbjct: 243 YITFIGLLFACSHNGLLGSG--------RAYFEAMDKVYGIKPGPEHYACMIDLLGRSGK 294

Query: 612 IDYASRFFDLMPV-RNVYSWNSMISGYARH 640
           +  A    + M V  +   W ++++    H
Sbjct: 295 LAEAKGLLNQMVVAPDAVVWKALLAACRVH 324



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 155/322 (48%), Gaps = 14/322 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++A   H  I+K GF     + N LI++Y + G L  A  +F +M D++ VSW  +V+GY
Sbjct: 58  QNAISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGY 117

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +H G   EA K+F +M  +G   ++ A+ SVL AC E   +   FG Q+H  ++KS    
Sbjct: 118 SHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAEL--TVMDFGQQIHATLVKSGLES 175

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V N L+ MY  C    D A R F+ + TRD+ISW ++I  Y+Q G      + + +M
Sbjct: 176 SLSVDNSLVTMYAKCGSIVD-ANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQM 234

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
              G     KP+  TF  L+ A   + L GS       AM K  G+       + ++   
Sbjct: 235 IATG----TKPDYITFIGLLFACSHNGLLGSG-RAYFEAMDKVYGIKPGPEHYACMIDLL 289

Query: 242 ARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGN---- 295
            R G    A+ +  QM +  + V    L+   R  KE+  G +    LF++  + +    
Sbjct: 290 GRSGKLAEAKGLLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYV 349

Query: 296 GLVNMYAKCGTIDDSRSVFRFM 317
            L NMY+  G  +D+  + R M
Sbjct: 350 MLSNMYSAAGKWEDAARIRRLM 371



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 115/222 (51%), Gaps = 9/222 (4%)

Query: 50  NSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQ 109
           + VSW  ++ G   +G   +A   F++M      ++ Y L SVL +         +  + 
Sbjct: 5   DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASM--KVMQNAIS 62

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
           VHCL++K+      LV+N LI MY       DCA  +F ++  +D++SW S+++ YS  G
Sbjct: 63  VHCLIIKTGFEAYKLVNNALIDMYAK-QGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNG 121

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLS 229
                 KLF +M+  G    + P++    S+++A   + L+     QQI A + K+GL S
Sbjct: 122 SYEEAIKLFCKMRISG----VYPDQIAVASVLSAC--AELTVMDFGQQIHATLVKSGLES 175

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
            L V ++LV+ +A+ G+   A + F+ M  ++V+S   L+ G
Sbjct: 176 SLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVG 217



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 136/328 (41%), Gaps = 53/328 (16%)

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
           +E  D +SWNS+I    + G        F +M+       +K +EYT  S++ +  S  +
Sbjct: 1   MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSR----DMKIDEYTLPSVLNSFASMKV 56

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
             + +   +  ++ K G  +   V +AL+  +A+ G    A  +F +M+ K+VVS   L+
Sbjct: 57  MQNAI--SVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLV 114

Query: 270 EGRRK-----------------------------------------GKEVHGYLIRSGLF 288
            G                                            G+++H  L++SGL 
Sbjct: 115 TGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLE 174

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
             ++V N LV MYAKCG+I D+   F  M  +D +SW  +I G  QNG  + ++  +  M
Sbjct: 175 SSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQM 234

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GLDSDVSVSNALLSLYADAGY 407
              G      + I  L +C+  G +  G+       K+ G+         ++ L   +G 
Sbjct: 235 IATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGK 294

Query: 408 LSRC---LKVFFLMPEHDQVSWNSVIGA 432
           L+     L    + P  D V W +++ A
Sbjct: 295 LAEAKGLLNQMVVAP--DAVVWKALLAA 320


>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 682

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/662 (36%), Positives = 377/662 (56%), Gaps = 9/662 (1%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           KGK +H  LI +  FD+V + N L++ YAKCG +  +R+VF  M  +++VS N ++SG  
Sbjct: 29  KGKALHARLITAAHFDVV-LHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSGYA 87

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            +G ++E++     +R      + + L + +S+ A++    +G+Q HG  +K G      
Sbjct: 88  SSGRHKESLQ---LLRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRY 144

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V NA+L +Y    ++    KVF  +   D  ++NS+I  + D   L   ++    +M   
Sbjct: 145 VFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQL-DGSLGIVRNMTGE 203

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
               + V+++ +L   +S     LG QVHAQ +K  +     + +AL+  YGKC  + D 
Sbjct: 204 AEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDA 263

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            + F  + E+ + VSW ++++ Y  NEL   A+ L   M   G + + FT+A  L++CA 
Sbjct: 264 NRAFEVLPEK-NVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAG 322

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           +A L  G  + AC ++      +++ +AL++MYSK G I+ A R F  MP+R+V SWN +
Sbjct: 323 LAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLI 382

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I+GYA HG   + +  F  M     +P +VTFVGVLSAC+  GLVDE F +  +M +  G
Sbjct: 383 ITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVG 442

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           + P  E ++CMV LL R G LD+ E FI    I  + + WR++L +C     +   LG +
Sbjct: 443 ITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSC--QVYKNYGLGHR 500

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
            A  + ++EP +   YVLL+NMYA   +W+ V K RK M+E  V+K  G SW+ +   VH
Sbjct: 501 VAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVH 560

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
           VF + ++ HP+ D I +KL+EL  +++  GYVP     L D++ E KE+ + YHSEK+A+
Sbjct: 561 VFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNFAVVLHDIDDERKEEHLMYHSEKLAL 620

Query: 874 AFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           AF L    K   I IMKNLR+C DCH A K IS +  R+IV+RD+ RFH    G CSC D
Sbjct: 621 AFGLIHTPKGATIHIMKNLRICDDCHVAIKLISVVTSRKIVVRDAVRFHCIEGGICSCND 680

Query: 933 YW 934
           YW
Sbjct: 681 YW 682



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 178/397 (44%), Gaps = 53/397 (13%)

Query: 18  YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM 77
           +DV L N LI+ Y + G +  A  +FD MP RN+VS   ++SGY   G   E+ ++ + +
Sbjct: 43  FDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSGYASSGRHKESLQLLRVV 102

Query: 78  VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
               F +N Y L + + A        +  G Q H   +K+       V N ++ MY  C 
Sbjct: 103 ---DFGMNEYVLSAAVSATANV--RSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCA 157

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
              D A ++FE +   D  ++NS+I+ Y  RG       +   M  E  ++         
Sbjct: 158 HMED-ASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVL 216

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
           G      + + +  S L  Q+ A   K  L  ++YVGSALV  + +  + + A + FE +
Sbjct: 217 G------HCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVL 270

Query: 258 IQKNVVSMNGL---------------------MEG--------------------RRKGK 276
            +KNVVS   +                     MEG                     R G 
Sbjct: 271 PEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGN 330

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
            +   ++++G +D + V N L+NMY+K G+I+D+  VF  M  +D VSWN +I+G   +G
Sbjct: 331 ALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHG 390

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
              E +  F +M    ++ S  + +  LS+CA LG +
Sbjct: 391 LAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLV 427



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 115/482 (23%), Positives = 221/482 (45%), Gaps = 49/482 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   +K GFA   ++ N ++ +Y +   +  ASK+F+ +   ++ ++  +++GY  +G  
Sbjct: 131 HGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQL 190

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           + +  + + M       +  +  +VL  C     S    G QVH   LK     +  V +
Sbjct: 191 DGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDS--VLGAQVHAQALKKRLELNVYVGS 248

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MYG C    D A R FE +  ++++SW ++++ Y+Q        +LF  M+ EG  
Sbjct: 249 ALVDMYGKCDHVHD-ANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEG-- 305

Query: 188 YSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
             ++PNE+T+   +   A  +++ +G+ L     A V K G    L V +AL++ +++ G
Sbjct: 306 --VQPNEFTYAVALNSCAGLAALRTGNAL----GACVMKTGHWDHLLVSNALMNMYSKSG 359

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVN 299
           +   A ++F  M  ++VVS N ++ G       R+G E    ++ + +        G+++
Sbjct: 360 SIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLS 419

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEA---IMNFCAMRRD 351
             A+ G +D++      M+ +  ++     +  M+  L + G  +EA   I+N C     
Sbjct: 420 ACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNC----- 474

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
            + +   +  S L+SC       LG ++  + L+L   SDV     L ++YA A      
Sbjct: 475 -IGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLE-PSDVGTYVLLSNMYAKANRWDGV 532

Query: 412 LKVFFLMPEH-----DQVSWNSV---IGAFADSEAL------VSEAVKYYLDMRRA-GWS 456
           +KV   M E        VSW  V   +  F   E +      +++ ++  +D  +A G+ 
Sbjct: 533 VKVRKHMRERAVRKSPGVSWIHVGSDVHVFTSEEKVHPQMDQIAKKLEELIDQIKAIGYV 592

Query: 457 PN 458
           PN
Sbjct: 593 PN 594


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 271/808 (33%), Positives = 424/808 (52%), Gaps = 118/808 (14%)

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
           LS   L + +   V  +G     ++ + L+  + +  +F YARK+F+++ Q +V++   L
Sbjct: 26  LSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTL 85

Query: 269 MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR--FMIGKDSVSWN 326
                                        +  Y+  G +  +R +F    +  +D+V +N
Sbjct: 86  -----------------------------ITAYSALGNLKMAREIFNETPLDMRDTVFYN 116

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ--QIHGEGL 384
            MI+G         AI  F AMR       +F+  S LS+ ++L +    Q  Q+HG  +
Sbjct: 117 AMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSA-STLIFYDERQCGQMHGTVV 175

Query: 385 KLGLDSDVSVSNALLSLYADAGY---------LSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           K G++   +V NALLS+Y              ++   K+F  MP+ ++  W ++I  +  
Sbjct: 176 KFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVR 235

Query: 436 S------------------------------EALVSEAVKYYLDMRRAGWSPNGVTFINI 465
           +                                L  +A+  +  MR  G   +  T+ ++
Sbjct: 236 NGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSV 295

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANET----TIENALLSCYGKCGEMDDCEKIFARMS 521
           ++A +      LG QVHA ++K  +  +     ++ N L++ Y K G++D   KIF  M 
Sbjct: 296 ISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMP 355

Query: 522 ERRDEVSWNSMISGYIHN----------ELLPKAMNLVWFMMQRG--------------- 556
            + D ++WN+++SGY++             +P+   L W +M  G               
Sbjct: 356 VK-DIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFN 414

Query: 557 -QRLD-----HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCG 610
             +LD      + FA  ++AC+ +  LE G ++HA  V    +  + +G+A++ MY++CG
Sbjct: 415 QMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCG 474

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
            ++ A   F  MP  +  SWNSMI+   +HGHG KA+ L+ QM  +G LPD  TF+ VLS
Sbjct: 475 IVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLS 534

Query: 671 ACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNS 730
           ACSHAGLV+EG ++F SM + YG+ P  + ++ M+DL  RAG+    +  I+ MP    +
Sbjct: 535 ACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARA 594

Query: 731 LIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARK 790
            IW  +L A CR +    +LG +AA  LF++ PQ+   YVLL+NMYAS G+W DVA+ RK
Sbjct: 595 PIWEALL-AGCRTHG-NMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRK 652

Query: 791 AMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKF 850
            M++  VKKE  CSW  +++ VHVF+  D  HPE   IY  L++LN +M+  GY+P TK+
Sbjct: 653 LMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKY 712

Query: 851 ALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKLP----IRIMKNLRVCGDCHSAFKFISK 906
            L D+E E KE  +S HSEK+AVAF L    KLP    +R+ KNLR+CGDCH+A KF+SK
Sbjct: 713 VLHDMESEHKEYALSTHSEKLAVAFGLM---KLPQGATVRVFKNLRICGDCHNAIKFMSK 769

Query: 907 IVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +VGREIV+RD  RFHHF +G+CSC +YW
Sbjct: 770 VVGREIVVRDGKRFHHFKNGECSCRNYW 797



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 152/610 (24%), Positives = 272/610 (44%), Gaps = 116/610 (19%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD--------------- 48
           A+  H  ++  GF     + N LI++Y +  D   A KLFDE+P                
Sbjct: 32  ARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSA 91

Query: 49  ------------------RNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
                             R++V +  +++GY+H    + A ++F+ M  A F  + +   
Sbjct: 92  LGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFA 151

Query: 91  SVLRAC-------QECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD-- 141
           SVL A        ++CG        Q+H  V+K        V N L+++Y  C  S    
Sbjct: 152 SVLSASTLIFYDERQCG--------QMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVS 203

Query: 142 ------CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-QREGFRYSLKPNE 194
                  AR++F+E+  R+   W ++I+ Y + GD     ++   M ++ G  ++   + 
Sbjct: 204 SSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISG 263

Query: 195 YTFGSLITAA------------------YSSVLS-----GSYLL-QQILAMVKKAGLLSD 230
           Y    L   A                  Y+SV+S     G +LL +Q+ A + K  L  D
Sbjct: 264 YLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPD 323

Query: 231 ----LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSG 286
               L VG+ L++ + + G    ARKIF +M  K++++ N L+ G               
Sbjct: 324 RDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSG--------------- 368

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
                         Y   G +++++S F  M  K+ ++W  MISGL QNG  E+A+  F 
Sbjct: 369 --------------YVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFN 414

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
            M+ DG   ++++    +++C+ LG +  G+Q+H + + LG DS +SV NA++++YA  G
Sbjct: 415 QMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCG 474

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
            +     +F  MP  D VSWNS+I A       V +A++ Y  M + G  P+  TF+ +L
Sbjct: 475 IVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGV-KAIELYEQMLKEGILPDRRTFLTVL 533

Query: 467 AAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           +A S   + + G++    +++ Y +A        ++  + + G+  D + +   M     
Sbjct: 534 SACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEAR 593

Query: 526 EVSWNSMISG 535
              W ++++G
Sbjct: 594 APIWEALLAG 603



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 12/130 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H QI+  G    + + N +I +Y R G + +A  +F  MP  + VSW  +++  
Sbjct: 442 ENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAAL 501

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   +A +++++M++ G L +R    +VL AC   G            LV + N+ F
Sbjct: 502 GQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAG------------LVEEGNRYF 549

Query: 122 DGLVSNVLIA 131
           + ++ N  IA
Sbjct: 550 NSMLENYGIA 559


>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
 gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/675 (35%), Positives = 388/675 (57%), Gaps = 30/675 (4%)

Query: 275 GKEVHGYLI---RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
           GK +H +LI   R+    ++ V N L+N YAK   +  + ++F  M  ++ VSW+ +++G
Sbjct: 48  GKTIHSHLIVTSRATENSIIEV-NSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTG 106

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
              NG   + I     M  +G +S N + L   +SSC   G +  G+Q HG  LK G   
Sbjct: 107 YLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSF 166

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS----------EALV 440
              V NAL+S+Y+    +   + V+  +P +D V++NS++ +  ++           ++V
Sbjct: 167 HNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMV 226

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
           SE+VK+           + VTF+N  +  +S    +LG  VH +++  +V  +  + +A+
Sbjct: 227 SESVKW-----------DKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAI 275

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD 560
           ++ YGKCG+      +F  + + R+ V W ++++    N    +A+NL   M Q   + +
Sbjct: 276 INMYGKCGKSLMARGVFDGL-QSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSN 334

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
            FT+A +L+ACA ++    G  +H    ++  +  V++G+AL++MY+K G I+ A + F 
Sbjct: 335 EFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFS 394

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
            M  R++ +WN+MI G++ HG G KAL +F  M      P++VTF GVLSAC H GLV E
Sbjct: 395 DMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQE 454

Query: 681 GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC 740
           GF +   + + +G+ P LE ++C+V LL + G+L++   F+   P+  + + WRT+L AC
Sbjct: 455 GFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNAC 514

Query: 741 CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKE 800
                +   LGR  A  + EM+P +   Y LL+N+YA   +W+ V K RK M++ ++KKE
Sbjct: 515 HVH--QNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKE 572

Query: 801 AGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESK 860
            G SW+ + +  H+F + D  HP+    Y+K+KEL   ++  GY P     L D+E E K
Sbjct: 573 PGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDIGAVLHDVEDEQK 632

Query: 861 EDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNR 919
           E  +SYHSEK+A+A+ +L   S+  I ++KNLR+C DCHSA + ISK+  R IV+RD+NR
Sbjct: 633 EYYLSYHSEKLAIAYGLLKLPSEASILVIKNLRICDDCHSAVRLISKVTNRVIVVRDANR 692

Query: 920 FHHFNDGKCSCGDYW 934
           FHHF DG+CSC DYW
Sbjct: 693 FHHFRDGRCSCLDYW 707



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 216/471 (45%), Gaps = 57/471 (12%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           HL +        +   N+LIN Y +V  ++ A  LFD MP+RN VSW+ +++GY   G S
Sbjct: 54  HLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFS 113

Query: 68  NEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            +  ++ K+M+  G +  N Y L   + +C  C     + G Q H L+LK+  +F   V 
Sbjct: 114 LKVIRLLKDMISEGNVSPNEYILAIAISSC--CDRGRVEEGRQCHGLLLKTGFSFHNYVR 171

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L++MY  C    D A  ++ E+   D++++NSI+S   + G      ++   M  E  
Sbjct: 172 NALVSMYSKCSIVQD-AMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSE-- 228

Query: 187 RYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
             S+K ++ TF +  +  A+   +  G ++  ++L     + +  D YV SA+++ + + 
Sbjct: 229 --SVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLT----SDVECDAYVSSAIINMYGKC 282

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLM----------------------------------- 269
           G    AR +F+ +  +NVV    +M                                   
Sbjct: 283 GKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLL 342

Query: 270 ------EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                   RR G  +HG+  +SG    V VGN L+NMYAK G I+ ++ VF  M+ +D +
Sbjct: 343 NACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDII 402

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGE 382
           +WN MI G   +G  ++A++ F  M       +  +    LS+C  LG +  G   +H  
Sbjct: 403 TWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHL 462

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
             + G+   +     ++SL +  G L+         P + D V+W +++ A
Sbjct: 463 MKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNA 513



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 215/461 (46%), Gaps = 56/461 (12%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------------------- 272
           ++L++ +A++     A  +F++M ++NVVS + LM G                       
Sbjct: 70  NSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNV 129

Query: 273 --------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
                                +G++ HG L+++G      V N LV+MY+KC  + D+  
Sbjct: 130 SPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMG 189

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           V+  +   D V++N+++S L +NG   E +    +M  + +     + ++  S CASL  
Sbjct: 190 VWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKD 249

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
           + LG  +HG+ L   ++ D  VS+A++++Y   G       VF  +   + V W +V+ A
Sbjct: 250 LRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVM-A 308

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN 492
                    EA+  +  M +     N  T+  +L A +  S  + G  +H    K    +
Sbjct: 309 SCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKH 368

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
              + NAL++ Y K G+++  +K+F+ M   RD ++WN+MI G+ H+ L  KA+ +   M
Sbjct: 369 HVMVGNALINMYAKSGDIEAAKKVFSDMMH-RDIITWNAMICGFSHHGLGKKALLVFQDM 427

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGME-----VHACGVRACLEFDVVIGSALVDMYS 607
           +   +  ++ TF  VLSAC  +  ++ G       +   GV+  LE    I    V + S
Sbjct: 428 LAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCI----VSLLS 483

Query: 608 KCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKAL 647
           K G+++ A  F    PV+ +V +W ++++  A H H +  L
Sbjct: 484 KTGQLNEARNFMRTAPVKWDVVAWRTLLN--ACHVHQNYGL 522



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 220/482 (45%), Gaps = 56/482 (11%)

Query: 104 FKFGMQVHC-LVLKSNQTFDGLVS-NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSI 161
            K G  +H  L++ S  T + ++  N LI  Y   +     A  +F+ +  R+++SW+++
Sbjct: 45  LKVGKTIHSHLIVTSRATENSIIEVNSLINFYAK-VNQVSIAHNLFDRMPERNVVSWSAL 103

Query: 162 ISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQIL 219
           ++ Y   G ++ V +L   M  EG   ++ PNEY     I++      V  G    +Q  
Sbjct: 104 MTGYLLNGFSLKVIRLLKDMISEG---NVSPNEYILAIAISSCCDRGRVEEG----RQCH 156

Query: 220 AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM---------- 269
            ++ K G     YV +ALVS +++      A  ++ ++   ++V+ N ++          
Sbjct: 157 GLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLR 216

Query: 270 EGR-------------------------------RKGKEVHGYLIRSGLFDMVAVGNGLV 298
           EG                                R G  VHG ++ S +     V + ++
Sbjct: 217 EGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAII 276

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
           NMY KCG    +R VF  +  ++ V W  +++   QNGC+EEA+  F  M ++ + S+ F
Sbjct: 277 NMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEF 336

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           +    L++CA L     G  +HG   K G    V V NAL+++YA +G +    KVF  M
Sbjct: 337 TYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDM 396

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
              D ++WN++I  F+    L  +A+  + DM  A   PN VTF  +L+A     + + G
Sbjct: 397 MHRDIITWNAMICGFSH-HGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEG 455

Query: 479 -HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-Y 536
            + +H  + ++ V         ++S   K G++++          + D V+W ++++  +
Sbjct: 456 FYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACH 515

Query: 537 IH 538
           +H
Sbjct: 516 VH 517



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 144/341 (42%), Gaps = 28/341 (8%)

Query: 2   KDAKL---FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIV 58
           KD +L    H ++L      D ++ + +IN+Y + G    A  +FD +  RN V W  ++
Sbjct: 248 KDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVM 307

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
           +     G   EA  +F +M +     N +    +L AC   G S  + G  +H    KS 
Sbjct: 308 ASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNAC--AGLSARRNGSLLHGHSEKSG 365

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
                +V N LI MY    +  + A+++F ++  RD+I+WN++I  +S  G       +F
Sbjct: 366 FKHHVMVGNALINMYAKSGD-IEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVF 424

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
             M          PN  TF  +++A      V  G Y L  ++   K+ G+   L   + 
Sbjct: 425 QDM----LAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLM---KQFGVQPGLEHYTC 477

Query: 237 LVSGFARLGNFYYARKIFEQM-IQKNVVSMNGLM------EGRRKGKEVHGYLIRSGLFD 289
           +VS  ++ G    AR       ++ +VV+   L+      +    G+ V  +++     D
Sbjct: 478 IVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPND 537

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD-----SVSW 325
            V     L N+YAK    D    V + M  K       VSW
Sbjct: 538 -VGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSW 577



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 5/119 (4%)

Query: 567 VLSACASVATLERGMEVHACGV---RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +L   A    L+ G  +H+  +   RA  E  ++  ++L++ Y+K  ++  A   FD MP
Sbjct: 35  LLKLSADTKNLKVGKTIHSHLIVTSRAT-ENSIIEVNSLINFYAKVNQVSIAHNLFDRMP 93

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDEG 681
            RNV SW+++++GY  +G   K + L   M  +G + P+       +S+C   G V+EG
Sbjct: 94  ERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEG 152


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 280/853 (32%), Positives = 447/853 (52%), Gaps = 81/853 (9%)

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY--GSCLESTDCARRIF 147
            S+L+ C++      + G QVH  ++ +       + + L+ +Y    C+E    ARR+F
Sbjct: 93  ASILQKCRKL--YNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVED---ARRMF 147

Query: 148 EEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS 207
           +++  R++ SW +I+ +Y   GD     KLF  M  EG R    P+ + F  +  A   S
Sbjct: 148 DKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVR----PDHFVFPKVFKAC--S 201

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
            L    + + +   +   G   +  V  +++  F + G    AR+ FE++  K+V   N 
Sbjct: 202 ELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNI 261

Query: 268 LMEGRRKGKEVHGYLI------RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG-- 319
           ++ G     E    L        SG+       N +++ YA+ G  +++   F  M G  
Sbjct: 262 MVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLK 321

Query: 320 ---KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
               + VSW  +I+G +QNG   EA+  F  M  +G+  ++ ++ S +S+C +L  +  G
Sbjct: 322 DFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHG 381

Query: 377 QQIHGEGLKLG-LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA- 434
           ++IHG  +K+  LDSD+ V N+L+  YA    +    + F ++ + D VSWN+++  +A 
Sbjct: 382 REIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYAL 441

Query: 435 -----DSEALVSE----------------------------AVKYYLDMRRAGWSPNGVT 461
                ++  L+SE                            A++++  M   G  PN  T
Sbjct: 442 RGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTT 501

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
               LAA       KLG ++H  V++ ++   T + +AL+S Y  C  ++    +F+ +S
Sbjct: 502 ISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELS 561

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
            R D V WNS+IS    +     A++L+  M      ++  T  + L AC+ +A L +G 
Sbjct: 562 TR-DVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGK 620

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           E+H   +R  L+    I ++L+DMY +CG I  + R FDLMP R++ SWN MIS Y  HG
Sbjct: 621 EIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHG 680

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
            G  A+ LF   +  G  P+H+TF  +LSACSH+GL++EG+K+FK M   Y + P +EQ+
Sbjct: 681 FGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQY 740

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM 761
           +CMVDLL RAG+ ++  EFI KMP  PN+ +W ++LGA CR +C   +L   AA  LFE+
Sbjct: 741 ACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA-CRIHC-NPDLAEYAARYLFEL 798

Query: 762 EPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDES 821
           EPQ++ NYVL+AN+Y++ G+WED AK R  MKE  V K  GCSW+ +K  +H FV GD S
Sbjct: 799 EPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTS 858

Query: 822 HPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRN 880
           HP  + I  K  +L                  D++ + KE  +  HSEKIA+AF +++  
Sbjct: 859 HPLMEQISGKDGKL------------------DVDEDEKEFSLCGHSEKIALAFGLISTT 900

Query: 881 SKLPIRIMKNLRV 893
              P+RI+KNLRV
Sbjct: 901 XGTPLRIIKNLRV 913



 Score =  250 bits (639), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 193/687 (28%), Positives = 316/687 (45%), Gaps = 58/687 (8%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q++ +G     FL + L+ VY + G +  A ++FD+M +RN  SW  I+  Y   G  
Sbjct: 112 HAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDY 171

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            E  K+F  MV  G   + +    V +AC E     ++ G  V+  +L      +  V  
Sbjct: 172 EETIKLFYLMVNEGVRPDHFVFPKVFKACSEL--KNYRVGKDVYDYMLSIGFEGNSCVKG 229

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            ++ M+  C    D ARR FEEIE +D+  WN ++S Y+ +G+     K  S M+  G  
Sbjct: 230 SILDMFIKC-GRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSG-- 286

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             +KP++ T+ ++I+  Y+         +  L M        ++   +AL++G  + G  
Sbjct: 287 --VKPDQVTWNAIIS-GYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYD 343

Query: 248 YYARKIFEQMIQKNV----------VSMNGLMEGRRKGKEVHGYLIRSGLFDM-VAVGNG 296
           + A  +F +M+ + V          VS    +   R G+E+HGY I+    D  + VGN 
Sbjct: 344 FEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNS 403

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL--- 353
           LV+ YAKC +++ +R  F  +   D VSWN M++G    G +EEAI     M+  G+   
Sbjct: 404 LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPD 463

Query: 354 -------------------------------MSSNFSLIS-TLSSCASLGWIMLGQQIHG 381
                                          M  N + IS  L++C  +  + LG++IHG
Sbjct: 464 IITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHG 523

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             L+  ++    V +AL+S+Y+    L     VF  +   D V WNS+I A A S   V+
Sbjct: 524 YVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVN 583

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
            A+    +M  +    N VT ++ L A S  +  + G ++H  +I+  +     I N+L+
Sbjct: 584 -ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLI 642

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
             YG+CG +    +IF  M + RD VSWN MIS Y  +     A+NL       G + +H
Sbjct: 643 DMYGRCGSIQKSRRIFDLMPQ-RDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNH 701

Query: 562 FTFATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
            TF  +LSAC+    +E G +          ++  V   + +VD+ S+ G+ +    F +
Sbjct: 702 ITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIE 761

Query: 621 LMPVR-NVYSWNSMISGYARHGHGDKA 646
            MP   N   W S++     H + D A
Sbjct: 762 KMPFEPNAAVWGSLLGACRIHCNPDLA 788



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 105/459 (22%), Positives = 190/459 (41%), Gaps = 78/459 (16%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMP----DRNSVSWACIVSGYTHKGMSNEACKMF 74
           D+   N ++  Y   G    A +L  EM     + + ++W  +V+G+T  G    A + F
Sbjct: 428 DLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFF 487

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
           + M   G   N   +   L AC +      K G ++H  VL+++      V + LI+MY 
Sbjct: 488 QRMHSMGMDPNTTTISGALAACGQV--RNLKLGKEIHGYVLRNHIELSTGVGSALISMYS 545

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
            C +S + A  +F E+ TRD++ WNSIIS  +Q G +++   L   M       +++ N 
Sbjct: 546 GC-DSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLS----NVEVNT 600

Query: 195 YTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
            T  S + A   S L+     ++I   + + GL +  ++ ++L+  + R G+   +R+IF
Sbjct: 601 VTMVSALPAC--SKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIF 658

Query: 255 EQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
           + M Q+++VS N ++                 ++ M   G   VN++            F
Sbjct: 659 DLMPQRDLVSWNVMIS----------------VYGMHGFGMDAVNLF----------QXF 692

Query: 315 RFM-IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           R M +  + +++  ++S    +G  EE    F  M+ +                      
Sbjct: 693 RTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTE---------------------- 730

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                         +D  V     ++ L + AG  +  L+    MP E +   W S++GA
Sbjct: 731 ------------YAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA 778

Query: 433 --FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
                +  L   A +Y  ++     S N V   NI +AA
Sbjct: 779 CRIHCNPDLAEYAARYLFELEPQS-SGNYVLMANIYSAA 816



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 147/323 (45%), Gaps = 24/323 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  +L++       + + LI++Y     L  A  +F E+  R+ V W  I+S  
Sbjct: 516 KLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISAC 575

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G S  A  + +EM  +   +N   + S L AC +   +  + G ++H  +++     
Sbjct: 576 AQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKL--AALRQGKEIHQFIIRCGLDT 633

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG---DTISVFKLF 178
              + N LI MYG C  S   +RRIF+ +  RDL+SWN +ISVY   G   D +++F+ F
Sbjct: 634 CNFILNSLIDMYGRC-GSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXF 692

Query: 179 SRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
             M        LKPN  TF +L++A ++S ++   +   +++          + Y  + +
Sbjct: 693 RTM-------GLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQY--ACM 743

Query: 238 VSGFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRK--GKEVHGYLIRSGLFDMVAVG 294
           V   +R G F    +  E+M  + N      L+   R     ++  Y  R  LF++    
Sbjct: 744 VDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARY-LFELEPQS 802

Query: 295 NG----LVNMYAKCGTIDDSRSV 313
           +G    + N+Y+  G  +D+  +
Sbjct: 803 SGNYVLMANIYSAAGRWEDAAKI 825


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 266/777 (34%), Positives = 426/777 (54%), Gaps = 48/777 (6%)

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
           SC  S   +  + E       +  N+ I  + + GD  +  KL SR QR      L+ N 
Sbjct: 4   SCGSSVGVSATLSETTHNNVTVDKNAKICKFCEMGDLRNAMKLLSRSQRS----ELELNT 59

Query: 195 YTFGSLITAAYSSVLSGSYL----------LQQILA------------MVKKA----GLL 228
           Y     + A   S+  G  +          + ++L             +VK      G+L
Sbjct: 60  YCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGIL 119

Query: 229 SD-LYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLMEG------RRKGKE 277
           +D +++ + L+S +A++GN+  +  +FE+M    I+ +  +   +++G       R+ K 
Sbjct: 120 NDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKR 179

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VHGY+++ G     AV N L+  Y KCG ++ +R +F  +  +D VSWN+MISG   NG 
Sbjct: 180 VHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGF 239

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
               +  F  M   G+   + +L++ L +CA++G + LG+ +H  G+K G    V  +N 
Sbjct: 240 SRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNT 299

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           LL +Y+  G L+   +VF  M E   VSW S+I A    E L  EA+  + +M+  G  P
Sbjct: 300 LLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHV-REGLHYEAIGLFDEMQSKGLRP 358

Query: 458 NGVTFINIL-AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           +     +++ A A S S+ K G +VH  + K N+ +   + NAL++ Y KCG M++   I
Sbjct: 359 DIYAVTSVVHACACSNSLDK-GREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLI 417

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F+++   ++ VSWN+MI GY  N L  +A+ L +  MQ+  + D  T A VL ACA +A 
Sbjct: 418 FSQLP-VKNIVSWNTMIGGYSQNSLPNEALQL-FLDMQKQLKPDDVTMACVLPACAGLAA 475

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           LE+G E+H   +R     D+ +  ALVDMY KCG +  A + FD++P +++  W  MI+G
Sbjct: 476 LEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAG 535

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           Y  HG G +A++ F +M++ G  P+  +F  +L AC+H+GL+ EG+K F SM     + P
Sbjct: 536 YGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEP 595

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAAN 756
           +LE ++CMVDLL R+G L +  +FI  MPI P++ IW  +L   CR +    EL  K A 
Sbjct: 596 KLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSG-CRIH-HDVELAEKVAE 653

Query: 757 MLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV 816
            +FE+EP+N   YVLLAN+YA   KWE+V K ++ + +  +K + GCSW+ ++   ++F 
Sbjct: 654 HIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFF 713

Query: 817 AGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
           AGD SHP+  +I   L++L  KM   GY  + K+AL + +   KE L+  HSEK+A+
Sbjct: 714 AGDTSHPQAKMIDSLLRKLTMKMNRGGYSNKIKYALINADDRLKEVLLCAHSEKLAM 770



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 154/585 (26%), Positives = 266/585 (45%), Gaps = 58/585 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +D K  H  I  +G A D  L   L+ +YV  GDL    ++FD + +     W  ++S Y
Sbjct: 74  EDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEY 133

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   E+  +F++M   G   + Y    VL+       +  +   +VH  VLK     
Sbjct: 134 AKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGF--AASAKVRECKRVHGYVLKLGFGS 191

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V N LIA Y  C E  + AR +F+E+  RD++SWNS+IS  +  G + +  + F +M
Sbjct: 192 YNAVVNSLIAAYFKCGE-VESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQM 250

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQIL-AMVKKAGLLSDLYVGSALVSG 240
              G        +    +L+    +    G+  L + L A   KAG    +   + L+  
Sbjct: 251 LNLGV-------DVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDM 303

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLM---------------------EGRR------ 273
           +++ GN   A ++F +M +  +VS   ++                     +G R      
Sbjct: 304 YSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAV 363

Query: 274 --------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                         KG+EVH ++ ++ +   + V N L+NMYAKCG+++++  +F  +  
Sbjct: 364 TSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPV 423

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           K+ VSWNTMI G  QN    EA+  F  M++  L   + ++   L +CA L  +  G++I
Sbjct: 424 KNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQ-LKPDDVTMACVLPACAGLAALEKGREI 482

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           HG  L+ G  SD+ V+ AL+ +Y   G L    ++F ++P+ D + W  +I  +      
Sbjct: 483 HGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYG-MHGF 541

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN- 498
             EA+  +  MR AG  P   +F +IL A +   + K G ++    +K     E  +E+ 
Sbjct: 542 GKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDS-MKSECNIEPKLEHY 600

Query: 499 -ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
             ++    + G +    K    M  + D   W +++SG  IH+++
Sbjct: 601 ACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDV 645


>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
          Length = 587

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 247/595 (41%), Positives = 352/595 (59%), Gaps = 16/595 (2%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLG-WIMLGQQIHGEGLKLG-LDSDVSVSNALLSLYADA 405
           M R GL  ++F+  S   + AS      +G QIH   ++ G L  D  VS A L +Y   
Sbjct: 1   MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 60

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVI-GAFADSEALVSEAVKYYLDMRRAGWSPNGVT--- 461
           G L     +F  MP  + V+WN+V+  A  D   L  E ++ Y  +R AG  PN V+   
Sbjct: 61  GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPL--ETIEAYFGLREAGGLPNVVSACA 118

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           F N  A A   S   LG Q H  V+K     + ++ N+++  YGKC        +F  M 
Sbjct: 119 FFNACAGAMYLS---LGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMG 175

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
            R + VSW SM++ Y  N    +A        + G+    F  ++ L+ CA +  L  G 
Sbjct: 176 VR-NSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGR 234

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
            +HA  VR+C++ ++ + SALVDMY KCG ++ A + F   P RN+ +WN+MI GYA  G
Sbjct: 235 ALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIG 294

Query: 642 HGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
               AL +F  M   G   P+++T V V+++CS  GL  +G++ F++M + +G+ P+ E 
Sbjct: 295 DAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEH 354

Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
           ++C+VDLLGRAG  ++  E I  MP+ P+  +W  +LGAC      KTELGR AA  LFE
Sbjct: 355 YACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHG--KTELGRIAAEKLFE 412

Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           ++PQ++ N+VLL+NM+AS G+W +    RK MK   +KK+ GCSWVT K+ VHVF A D 
Sbjct: 413 LDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDT 472

Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTR 879
            H   + I   L +L ++M+ AGY+P T+++L+DLE E KE  V  HSEK+A+AF ++  
Sbjct: 473 KHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICI 532

Query: 880 NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
              +PIRIMKNLR+C DCH AFKFIS IVGREI++RD+NRFHHF   +CSCGDYW
Sbjct: 533 PPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 587



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 189/392 (48%), Gaps = 46/392 (11%)

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLS-DLYVGSALVSGFARL 244
            R  L+PN++TF S   AA +S    S +  QI ++  + G L  D +V  A +  + + 
Sbjct: 2   LRLGLRPNDFTFPSAFKAA-ASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 60

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLM-----EGR--------------------------- 272
           G    AR +F +M  +NVV+ N +M     +GR                           
Sbjct: 61  GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFF 120

Query: 273 ---------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      G++ HG++++ G    V+V N +V+ Y KC     +R+VF  M  ++SV
Sbjct: 121 NACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV 180

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SW +M++   QNG  EEA   +   RR G   ++F + S L++CA L  + LG+ +H   
Sbjct: 181 SWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVA 240

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           ++  +D+++ V++AL+ +Y   G +    ++F+  P+ + V+WN++IG +A        A
Sbjct: 241 VRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHI-GDAQNA 299

Query: 444 VKYYLDMRRAG-WSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALL 501
           +  + DM R+G  +PN +T +N++ + S   + K G+++   +  ++ +   T     ++
Sbjct: 300 LLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVV 359

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
              G+ G  +   ++   M  R     W +++
Sbjct: 360 DLLGRAGMEEQAYEVIQGMPMRPSISVWGALL 391



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 178/371 (47%), Gaps = 6/371 (1%)

Query: 275 GKEVHGYLIRSGLFDMVA-VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           G ++H   IR G   +   V    ++MY K G +  +R +F  M  ++ V+WN +++   
Sbjct: 30  GPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAV 89

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            +G   E I  +  +R  G + +  S  +  ++CA   ++ LG+Q HG  +K G + DVS
Sbjct: 90  LDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVS 149

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V N+++  Y       +   VF  M   + VSW S++ A+A + A   EA   YL  RR+
Sbjct: 150 VLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGA-EEEAFAAYLGARRS 208

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G  P      + L   +      LG  +HA  ++  +     + +AL+  YGKCG ++D 
Sbjct: 209 GEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDA 268

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF-TFATVLSACA 572
           E+IF   + +R+ V+WN+MI GY H      A+ +   M++ G+   ++ T   V+++C+
Sbjct: 269 EQIFYE-TPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCS 327

Query: 573 SVATLERGMEV-HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-W 630
                + G E+      R  +E      + +VD+  + G  + A      MP+R   S W
Sbjct: 328 RGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVW 387

Query: 631 NSMISGYARHG 641
            +++     HG
Sbjct: 388 GALLGACKMHG 398



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 214/487 (43%), Gaps = 57/487 (11%)

Query: 8   HLQILKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           H   ++ G+   D F+    +++Y + G L  A  LF EMP+RN V+W  +++     G 
Sbjct: 34  HSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGR 93

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             E  + +  +  AG L N  +  +   AC   G      G Q H  V+K     D  V 
Sbjct: 94  PLETIEAYFGLREAGGLPNVVSACAFFNACA--GAMYLSLGEQFHGFVVKCGFEMDVSVL 151

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N ++  YG C      AR +F+ +  R+ +SW S+++ Y+Q G     F  +   +R G 
Sbjct: 152 NSMVDFYGKC-RCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSG- 209

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
               +P ++   S +T    + L G +L + + A+  ++ + ++++V SALV  + + G 
Sbjct: 210 ---EEPTDFMVSSALTTC--AGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGC 264

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLF-DMVAVGN------GLVN 299
              A +IF +  Q+N+V+ N ++ G     +    L+   +F DM+  G        LVN
Sbjct: 265 VEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALL---VFDDMIRSGETAPNYITLVN 321

Query: 300 MYAKC---GTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           +   C   G   D   +F     RF I   +  +  ++  L + G  E+A      M   
Sbjct: 322 VITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMP-- 379

Query: 352 GLMSSNFSLI-STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLS 409
             M  + S+  + L +C   G   LG +I  E L   LD   S ++ LLS ++A AG  +
Sbjct: 380 --MRPSISVWGALLGACKMHGKTELG-RIAAEKL-FELDPQDSGNHVLLSNMFASAGRWA 435

Query: 410 RCLKVFFLM--------PEHDQVSWNSVIGAFA----------DSEALVSEAVKYYLDMR 451
               +   M        P    V+W +V+  F           + +AL+S+  K    M+
Sbjct: 436 EATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRK---QMQ 492

Query: 452 RAGWSPN 458
            AG+ P+
Sbjct: 493 AAGYMPD 499



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 154/339 (45%), Gaps = 25/339 (7%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           FH  ++K GF  DV + N++++ Y +      A  +FD M  RNSVSW  +V+ Y   G 
Sbjct: 135 FHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGA 194

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA   +    R+G     + + S L  C   G  G   G  +H + ++S    +  V+
Sbjct: 195 EEEAFAAYLGARRSGEEPTDFMVSSALTTCA--GLLGLHLGRALHAVAVRSCIDANIFVA 252

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L+ MYG C    D A +IF E   R+L++WN++I  Y+  GD  +   +F  M R G 
Sbjct: 253 SALVDMYGKCGCVED-AEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSG- 310

Query: 187 RYSLKPNEYTFGSLITAAYSSVLS--GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                PN  T  ++IT+     L+  G  L +    M ++ G+       + +V    R 
Sbjct: 311 --ETAPNYITLVNVITSCSRGGLTKDGYELFE---TMRERFGIEPRTEHYACVVDLLGRA 365

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LV 298
           G    A ++ + M  +  +S+ G + G  +  GK   G +    LF++    +G    L 
Sbjct: 366 GMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLS 425

Query: 299 NMYAKCGTIDDSRSVFRFM----IGKDS----VSWNTMI 329
           NM+A  G   ++  + + M    I KD     V+W  ++
Sbjct: 426 NMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVV 464


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 227/547 (41%), Positives = 331/547 (60%), Gaps = 8/547 (1%)

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           D+   N ++S Y   G   +   +F  MP  D  SW ++I           EA++ Y  M
Sbjct: 183 DLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNR-PEEALELYRLM 241

Query: 451 RRAGWSP-NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           ++  +S  N  T  + LAA+++     +G ++H  +++  + ++  +  +LL  YGKCG 
Sbjct: 242 QKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGS 301

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           +++   IF +M E RD VSW +MI  Y+ N    +   L   +M      + FTFA VL+
Sbjct: 302 IEEARYIFDKM-EERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLN 360

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           ACA +A  + G ++HA  VR   +      SALV MYSKCG I+ A   F+++P  +++S
Sbjct: 361 ACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFS 420

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           W S++ GYA+HG  DKAL  F  +   G  PD + F+GVLSAC+HAGLVD+G ++F S+ 
Sbjct: 421 WTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIK 480

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKT 748
           + +GL   ++ ++C++DLL RAG+  + E  IN+MPI P+  IW  +LG C    N    
Sbjct: 481 EKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGN---L 537

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
           EL ++AA  LFE+EP+N   YV LAN+YAS G   + A  R+ M    + K+ G SW+ +
Sbjct: 538 ELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEI 597

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
           +  VHVF  GD SHP+   I E L EL+++M++ GYVP T F L D+E E KE+ +SYHS
Sbjct: 598 RREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENLSYHS 657

Query: 869 EKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGK 927
           EK+AVAF +++  S  PI++ KNLR C DCH+A KFIS I GR+I++RDSNRFH F  G 
Sbjct: 658 EKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGS 717

Query: 928 CSCGDYW 934
           CSC DYW
Sbjct: 718 CSCKDYW 724



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 216/450 (48%), Gaps = 54/450 (12%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           ++GK+VH ++  SG   +  + N L++MYAKCG++ D+  VF  M+ +D  SWN MISG 
Sbjct: 136 KEGKQVHAHIKTSGSIGLY-ISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGY 194

Query: 333 DQNGCYEEAIMNFCAM-RRDGLMSSNFSLISTLSSCAS---------------------- 369
            + G +E+A   F  M  RD     NFS  + +S C                        
Sbjct: 195 VKGGNFEKARNLFDKMPNRD-----NFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKS 249

Query: 370 --------------LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
                         +  + +G++IHG  +++GLDSD  V  +LL +Y   G +     +F
Sbjct: 250 NKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIF 309

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
             M E D VSW ++I  +  +     E    +  +  +   PN  TF  +L A +  +  
Sbjct: 310 DKMEERDVVSWTTMIHTYLKN-GRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAE 368

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
            LG Q+HA +++    + ++  +AL+  Y KCG++++ + +F  + +  D  SW S++ G
Sbjct: 369 DLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQ-PDLFSWTSLLVG 427

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-VHACGVRACLEF 594
           Y  +    KA++    +++ G + D   F  VLSACA    +++G+E  H+   +  L  
Sbjct: 428 YAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTR 487

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGH---GDKALTLF 650
            +   + ++D+ ++ G+   A    + MP++ + Y W +++ G   HG+     +A    
Sbjct: 488 TIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSL 547

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
            +++ + P     T+V + +  + AG+  E
Sbjct: 548 FEIEPENP----ATYVTLANIYASAGMRAE 573



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 115/530 (21%), Positives = 218/530 (41%), Gaps = 88/530 (16%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K+ K  H  I   G +  +++ N L+++Y + G L  A K+FDEM  R+  SW  ++SGY
Sbjct: 136 KEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGY 194

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRAC-QECGP------------------- 101
              G   +A  +F +M       + ++  +++  C Q   P                   
Sbjct: 195 VKGGNFEKARNLFDKMPNR----DNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSN 250

Query: 102 --------------SGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIF 147
                              G ++H  +++     D +V   L+ MYG C  S + AR IF
Sbjct: 251 KCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKC-GSIEEARYIF 309

Query: 148 EEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS 207
           +++E RD++SW ++I  Y + G     F LF    R     ++ PN++TF  ++ A   +
Sbjct: 310 DKMEERDVVSWTTMIHTYLKNGRREEGFALF----RHLMNSNIMPNDFTFAGVLNAC--A 363

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
            L+   L +QI A + + G  S     SALV  +++ G+   A+ +FE + Q ++ S   
Sbjct: 364 DLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTS 423

Query: 268 LMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI----GKDSV 323
           L+ G                             YA+ G  D +   F  ++      D +
Sbjct: 424 LLVG-----------------------------YAQHGQHDKALHFFELLLKSGTKPDGI 454

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMR-RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           ++  ++S     G  ++ +  F +++ + GL  +       +   A  G     + I  E
Sbjct: 455 AFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINE 514

Query: 383 GLKLGLDSDVSVSNALLS---LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
              + +  D  +  ALL    ++ +     R  K  F +   +  ++ ++   +A +   
Sbjct: 515 ---MPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMR 571

Query: 440 VSEA-VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
             EA ++  +D R     P G+++I I      FS+G   H    ++++Y
Sbjct: 572 AEEANIRETMDSRGIVKKP-GMSWIEIRREVHVFSVGDNSHPKSKEILEY 620



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 39/237 (16%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           + T+L  C     L+ G +VHA  ++      + I + L+DMY+KCG +  A + FD M 
Sbjct: 122 YLTLLKFCLKQRALKEGKQVHA-HIKTSGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMV 180

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            R++ SWN MISGY + G+ +KA  LF +M    P  D+ ++  ++S C      +E  +
Sbjct: 181 HRDLCSWNIMISGYVKGGNFEKARNLFDKM----PNRDNFSWTAIISGCVQHNRPEEALE 236

Query: 684 HFKSMSQ----------------VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPIT 727
            ++ M +                    IP L         +G+     KI   I +M + 
Sbjct: 237 LYRLMQKHDYSKSNKCTISSALAASAAIPSLH--------MGK-----KIHGHIMRMGLD 283

Query: 728 PNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
            + ++W ++L       C   E   +A  +  +ME ++ V++  + + Y   G+ E+
Sbjct: 284 SDEVVWCSLLDM--YGKCGSIE---EARYIFDKMEERDVVSWTTMIHTYLKNGRREE 335


>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 269/824 (32%), Positives = 419/824 (50%), Gaps = 75/824 (9%)

Query: 143 ARRIFEEIETR--DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
           A ++F+E+  R  D +SW ++IS YSQ G     F+ FS M R+        + ++F S+
Sbjct: 93  AEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSV 152

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
           + A  S  L  S L  Q+ A+V K G   +  + +++V  + + G+   A  +F  + + 
Sbjct: 153 MKACGS--LGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERP 210

Query: 261 NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
           ++   N +         ++GY                  MY     +     +F  M  +
Sbjct: 211 SLFCWNSM---------IYGY----------------SQMYGPYKALQ----IFNRMPER 241

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D VSWNT+IS   Q+G   + +  F  M   G   +  +  S LS+CAS   +  G  +H
Sbjct: 242 DEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLH 301

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
              L++    D+   N L+ +YA  G L    +VF  + EHD +SWNS+I        L 
Sbjct: 302 ARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHF-GLG 360

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
            +A+  +  MRR+    +      IL   S       G  +H   IK  + +   + NA+
Sbjct: 361 EDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAI 420

Query: 501 LSCYGKCGEMDDCEKIFARMSER------------------------------RDEVSWN 530
           ++ Y KCG+ D  + +F  M  R                              R+ V+WN
Sbjct: 421 ITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWN 480

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           SM+S Y+ N    + + L   M   G + D  TF T + ACA +A ++ GM+V     + 
Sbjct: 481 SMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKF 540

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
            L  +V + +++V MYS+CG I  A   FD +  +++ SWN+M++ +A++G G K +  F
Sbjct: 541 GLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTF 600

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
             M      P+H+++V VLS CSH GLV EG  +F SM++V+G+ P  E FSCMVDLLGR
Sbjct: 601 EDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGR 660

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
           AG L++ ++ I  MP  PN+ +W  +LG+ CR +     L   AA  L E++ + +  YV
Sbjct: 661 AGLLEQAKDLIEGMPFKPNATVWSALLGS-CRVH-HDLRLAETAAKKLMELDVEGSEGYV 718

Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
           LL+NMY+  G+ ++VA  RK MK   ++   GCSW+ + + VHVF   + SHP+   +Y 
Sbjct: 719 LLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYL 778

Query: 831 KLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMK 889
           KL+E+ + + D G     + ++      SK+    YHSEK+A AF +L   S +PI +MK
Sbjct: 779 KLEEMMKMIEDTGKYITVESSVH----RSKK----YHSEKLAFAFGLLNLPSWMPIHVMK 830

Query: 890 NLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
           NLRVC DCH   K +S +  RE+++RD  RFHHF DG CSC DY
Sbjct: 831 NLRVCDDCHLVIKLLSLVTSRELIMRDGYRFHHFKDGICSCKDY 874



 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 163/646 (25%), Positives = 295/646 (45%), Gaps = 125/646 (19%)

Query: 9   LQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR--NSVSWACIVSGYTHKGM 66
            Q+ +     ++F  NT+I   V    ++ A KLFDEMP R  +SVSW  ++SGY+  G 
Sbjct: 63  FQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGF 122

Query: 67  SNEACKMFKEMVR----AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            + + + F  M+R     G   + ++  SV++AC   G S  +  +Q+H LV K     +
Sbjct: 123 HSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDS--RLAIQLHALVSKLGFGME 180

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIE------------------------------- 151
             + N ++ MY  C +  D A  +F +IE                               
Sbjct: 181 TCIQNSVVGMYVKCGD-VDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMP 239

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA--AYSSVL 209
            RD +SWN++IS++SQ G  +    +F  M  +GF     PN  T+GS+++A  + S + 
Sbjct: 240 ERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGF----SPNFMTYGSVLSACASTSDLK 295

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
            G++L  +IL M        DL  G+ L+  +A+ G    A+++F+ + + + +S N L+
Sbjct: 296 WGAHLHARILRMEHSL----DLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLI 351

Query: 270 EG-----------------RRK------------------------GKEVHGYLIRSGLF 288
            G                 RR                         G+ +HGY I+SG+ 
Sbjct: 352 TGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMG 411

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFM--------------------IGK-------- 320
               VGN ++ MYAKCG  D +  VFR M                    IGK        
Sbjct: 412 SSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMM 471

Query: 321 ---DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
              + V+WN+M+S   QNG  EE +  + +MR +G+     +  +++ +CA L  + LG 
Sbjct: 472 PERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGM 531

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           Q+     K GL  +VSV+N+++++Y+  G +      F  + + D +SWN+++ AFA + 
Sbjct: 532 QVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQN- 590

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTI 496
            L  + +  + DM +    PN ++++++L+  S   +   G H   +    + ++     
Sbjct: 591 GLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEH 650

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI-SGYIHNEL 541
            + ++   G+ G ++  + +   M  + +   W++++ S  +H++L
Sbjct: 651 FSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDL 696



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 153/565 (27%), Positives = 255/565 (45%), Gaps = 105/565 (18%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF---------------RFMIG 319
            +++H  LI SGL   + + N L++MY+ CG   D+  VF               R ++ 
Sbjct: 27  ARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVS 86

Query: 320 ------------------KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD----GLMSSN 357
                             KDSVSW TMISG  QNG +  +   F  M RD    G     
Sbjct: 87  SSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDP 146

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS-------- 409
           FS  S + +C SLG   L  Q+H    KLG   +  + N+++ +Y   G +         
Sbjct: 147 FSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFD 206

Query: 410 -----------------------RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
                                  + L++F  MPE D+VSWN++I  F+       + +  
Sbjct: 207 IERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFS-QHGFGVQCLAM 265

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
           +++M   G+SPN +T+ ++L+A +S S  K G  +HA++++   + +    N L+  Y K
Sbjct: 266 FVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAK 325

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
           CG +D  +++F  + E  D +SWNS+I+G +H  L   A+ L   M +    LD F   T
Sbjct: 326 CGCLDLAKRVFKSLRE-HDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPT 384

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA----------- 615
           +L  C+       G  +H   +++ +     +G+A++ MY+KCG  D A           
Sbjct: 385 ILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRN 444

Query: 616 -----------SR---------FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
                      SR         +FD+MP RN+ +WNSM+S Y ++G  ++ L L+  M+ 
Sbjct: 445 TISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRS 504

Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD 715
           +G  PD +TF   + AC+   +V  G +     ++ +GL   +   + +V +  R G + 
Sbjct: 505 NGVQPDWITFTTSIRACADLAIVKLGMQVVTHATK-FGLSLNVSVANSIVTMYSRCGLIK 563

Query: 716 KIEEFINKMPITPNSLI-WRTVLGA 739
           + +   +   I    LI W  +L A
Sbjct: 564 EAKNTFDS--IDDKDLISWNAMLAA 586



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 115/264 (43%), Gaps = 67/264 (25%)

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCG---------------------------- 508
           +  ++HAQ+I   + +   + N LL  Y  CG                            
Sbjct: 26  IARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALV 85

Query: 509 ---EMDDCEKIFARMSER-RDEVSWNSMISGYIHNELLPKAMNLVWFMMQR----GQRLD 560
               M D EK+F  M  R +D VSW +MISGY  N    ++      M++     G+  D
Sbjct: 86  SSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYD 145

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA-SRFF 619
            F+F +V+ AC S+      +++HA   +     +  I +++V MY KCG +D A + FF
Sbjct: 146 PFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFF 205

Query: 620 DL------------------------------MPVRNVYSWNSMISGYARHGHGDKALTL 649
           D+                              MP R+  SWN++IS +++HG G + L +
Sbjct: 206 DIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAM 265

Query: 650 FSQMKLDGPLPDHVTFVGVLSACS 673
           F +M   G  P+ +T+  VLSAC+
Sbjct: 266 FVEMCNQGFSPNFMTYGSVLSACA 289


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 266/765 (34%), Positives = 421/765 (55%), Gaps = 54/765 (7%)

Query: 211 GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
           G Y+ + +L+ +    LLS + +G+AL+S F R G+   A  +F +M ++++ S N L+ 
Sbjct: 52  GEYVWKAVLSSL--VTLLS-VRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVG 108

Query: 271 GRRK-----------------------------------------GKEVHGYLIRSGLFD 289
           G  K                                         G+EVH +++R   FD
Sbjct: 109 GYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFD-FD 167

Query: 290 M-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
           M V V N L+ MY KCG +  +R +F  M  +D +SWN MISG  +N    E +  F  M
Sbjct: 168 MDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRM 227

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           R   +     ++ S +S+C  LG   LG Q+H   ++   D ++SV N+L+ +Y   G+ 
Sbjct: 228 RELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHW 287

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
                VF  M   D VSW ++I    D+  L  +A++ Y  M   G  P+ VT  ++L+A
Sbjct: 288 KEAESVFSGMECRDVVSWTTIISGCVDN-LLPDKALETYKTMEITGTMPDEVTIASVLSA 346

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
            +S     +G ++H    +        + N+L+  Y KC  ++   +IF ++ ++ D +S
Sbjct: 347 CASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDK-DVIS 405

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           W S+I+G   N    +A+     M+ + +  +  T  + LSACA V  L  G E+HA  +
Sbjct: 406 WTSVINGLRINNRCFEALIFFRKMILKSKP-NSVTLISALSACARVGALMCGKEIHAHAL 464

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
           +A + FD  + +A++D+Y +CGR+  A   F+L   ++V +WN +++GYA+ G G   + 
Sbjct: 465 KAGMGFDGFLPNAILDLYVRCGRMRTALNQFNLNE-KDVGAWNILLTGYAQKGKGAMVME 523

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           LF +M      PD VTF+ +L ACS +G+V EG ++F+ M   Y + P L+ ++C+VDLL
Sbjct: 524 LFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLL 583

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
           GRAG+L++  EFI +MPI P+  IW  +L AC R + R   LG  AA  +F+ + ++   
Sbjct: 584 GRAGKLNEAHEFIERMPIKPDPAIWGALLNAC-RIH-RHVLLGELAAQHIFKQDAESIGY 641

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
           Y+LL N+YA  GKW++VAK R+ MKE  +  + GCSWV +K  VH F++GD  HP+   I
Sbjct: 642 YILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEI 701

Query: 829 YEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRI 887
              L+   +KM+ +G+  Q   ++  ++  SK D+   HSE+ A+A+ L  ++  +PI +
Sbjct: 702 NVVLEGFYEKMKTSGFNGQECSSMDGIQT-SKADIFCGHSERQAIAYSLINSAPGMPIWV 760

Query: 888 MKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
            KNL +C  CHS  KFISKIV REI +RD+ +FHHF DG CSCGD
Sbjct: 761 TKNLYMCQSCHSTVKFISKIVRREISVRDTEQFHHFKDGLCSCGD 805



 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 161/568 (28%), Positives = 273/568 (48%), Gaps = 59/568 (10%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           V L N L++++VR GD+ +A  +F  M +R+  SW  +V GYT  G  +EA  ++  ++ 
Sbjct: 69  VRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILW 128

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
           AG   + Y   SVLR+C   G      G +VH  V++ +   D  V N LI MY  C + 
Sbjct: 129 AGIRPDVYTFPSVLRSCA--GAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDV 186

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
              AR +F+++ TRD ISWN++IS Y +  + +   +LF RM+      S+ P+  T  S
Sbjct: 187 VS-ARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMR----ELSIDPDLMTMTS 241

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           +I+A    +L    L  Q+ + V +     ++ V ++L+  +  +G++  A  +F  M  
Sbjct: 242 VISAC--ELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMEC 299

Query: 260 KNVVSMNGLMEG-----------------------------------------RRKGKEV 278
           ++VVS   ++ G                                            G ++
Sbjct: 300 RDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKL 359

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H    R+G    V V N L++MY+KC  I+ +  +F  +  KD +SW ++I+GL  N   
Sbjct: 360 HELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRC 419

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
            EA++ F  M      +S  +LIS LS+CA +G +M G++IH   LK G+  D  + NA+
Sbjct: 420 FEALIFFRKMILKSKPNS-VTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAI 478

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD--SEALVSEAVKYYLDMRRAGWS 456
           L LY   G +   L  F L  E D  +WN ++  +A     A+V E  K    M  +  +
Sbjct: 479 LDLYVRCGRMRTALNQFNL-NEKDVGAWNILLTGYAQKGKGAMVMELFK---RMVESEIN 534

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQV-IKYNVANETTIENALLSCYGKCGEMDDCEK 515
           P+ VTFI++L A S   M   G +   ++ + Y++         ++   G+ G++++  +
Sbjct: 535 PDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHE 594

Query: 516 IFARMSERRDEVSWNSMISG-YIHNELL 542
              RM  + D   W ++++   IH  +L
Sbjct: 595 FIERMPIKPDPAIWGALLNACRIHRHVL 622



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/471 (23%), Positives = 214/471 (45%), Gaps = 60/471 (12%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +++  F  DV + N LI +YV+ GD+ SA  LFD+MP R+ +SW  ++SGY      
Sbjct: 158 HAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDEC 217

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS- 126
            E  ++F  M       +   + SV+ AC+  G    + G Q+H  V+++   +DG +S 
Sbjct: 218 LEGLELFFRMRELSIDPDLMTMTSVISACELLGDE--RLGTQLHSYVVRT--AYDGNISV 273

Query: 127 -NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
            N LI MY S     + A  +F  +E RD++SW +IIS            + +  M+  G
Sbjct: 274 YNSLIQMYLSVGHWKE-AESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITG 332

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
                 P+E T  S+++A  S  L    +  ++  + ++ G +  + V ++L+  +++  
Sbjct: 333 ----TMPDEVTIASVLSACAS--LGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCK 386

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------- 274
               A +IF Q+  K+V+S   ++ G R                                
Sbjct: 387 RIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKSKPNSVTLISALSA 446

Query: 275 ---------GKEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                    GKE+H + +++G+ FD   + N ++++Y +CG +  + + F  +  KD  +
Sbjct: 447 CARVGALMCGKEIHAHALKAGMGFDGF-LPNAILDLYVRCGRMRTALNQFN-LNEKDVGA 504

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           WN +++G  Q G     +  F  M    +   + + IS L +C+  G +  G + + + +
Sbjct: 505 WNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLE-YFQRM 563

Query: 385 KLG--LDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           K+   +  ++     ++ L   AG L+   +    MP + D   W +++ A
Sbjct: 564 KVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNA 614



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 137/313 (43%), Gaps = 20/313 (6%)

Query: 13  KHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACK 72
           + G    V + N+LI++Y +   +  A ++F ++PD++ +SW  +++G        EA  
Sbjct: 365 RTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALI 424

Query: 73  MFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAM 132
            F++M+      N   L S L AC   G      G ++H   LK+   FDG + N ++ +
Sbjct: 425 FFRKMILKS-KPNSVTLISALSACARVG--ALMCGKEIHAHALKAGMGFDGFLPNAILDL 481

Query: 133 YGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKP 192
           Y  C        +    +  +D+ +WN +++ Y+Q+G    V +LF RM        + P
Sbjct: 482 YVRCGRMRTALNQF--NLNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVES----EINP 535

Query: 193 NEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
           ++ TF SL+ A   S  V  G    Q+   M     +  +L   + +V    R G    A
Sbjct: 536 DDVTFISLLCACSRSGMVTEGLEYFQR---MKVNYHITPNLKHYACVVDLLGRAGKLNEA 592

Query: 251 RKIFEQM-IQKNVVSMNGLMEGRRKGKEV-HGYLIRSGLFDMVAVGNG----LVNMYAKC 304
            +  E+M I+ +      L+   R  + V  G L    +F   A   G    L N+YA  
Sbjct: 593 HEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADS 652

Query: 305 GTIDDSRSVFRFM 317
           G  D+   V R M
Sbjct: 653 GKWDEVAKVRRTM 665


>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 755

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 245/707 (34%), Positives = 384/707 (54%), Gaps = 51/707 (7%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           + +HG+  + G   ++   N L+ +Y K   +D +  +F  +  K++ +W  +ISG  + 
Sbjct: 52  RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARA 111

Query: 336 GCYEEAIMN-FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
               E + + F  M+ DG   + ++L S L  C+    I  G+ IH   L+ G+  DV +
Sbjct: 112 AGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVL 171

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD----- 449
            N++L LY            F LM E D VSWN +IGA+   E  V ++++ + +     
Sbjct: 172 ENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYL-REGDVEKSLEMFRNFPNKD 230

Query: 450 --------------------------MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
                                     M   G   + VTF   L   SS S+ ++G Q+H 
Sbjct: 231 VVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHG 290

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS---------------ERRDEVS 528
           +V+ + + ++  I ++L+  YGKCG MD    I   +                 +   VS
Sbjct: 291 RVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVS 350

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           W+SM+SGY+ N      M     M+     +D  T AT++SACA+   LE G ++HA   
Sbjct: 351 WSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQ 410

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
           +  L  D  +GS+L+DMYSK G +D A   F+ +   NV  W SMISG A HG G +A++
Sbjct: 411 KIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAIS 470

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           LF  M   G +P+ VTFVGVL+ACSH GL++EG ++F+ M   Y + P++E ++ MV+L 
Sbjct: 471 LFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLY 530

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
           GRAG L + + FI +  I+  + +WR+ L + CR + +   +G+  + ML +  P +   
Sbjct: 531 GRAGHLIEAKNFIFENSISHFTSVWRSFLSS-CRLH-KNFNMGKSVSEMLLQSAPSDPDA 588

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
           Y+LL+NM +S  +W++ A  R  M +  VKK+ G SWV +KD +H F  GD SHP+   I
Sbjct: 589 YILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEI 648

Query: 829 YEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRI 887
           Y  L  L  ++++ GY    K  + D+E E  E L+S+HSEK+A+ F ++  + + PIRI
Sbjct: 649 YSYLDSLIGRLKEIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFSIINTSPRTPIRI 708

Query: 888 MKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           MKNLR+C DCH+ FK+ S+++ REI++RD++RFHHF    CSCG+YW
Sbjct: 709 MKNLRICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 139/530 (26%), Positives = 248/530 (46%), Gaps = 59/530 (11%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC-KMFKEMVRAGF 82
           N L+ +YV+  +L  A KLFDE+  +N+ +W  ++SG+     S+E    +F+EM   G 
Sbjct: 71  NYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGA 130

Query: 83  LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC 142
             N+Y L SVL+ C     +  +FG  +H  +L++    D ++ N ++ +Y  C E  + 
Sbjct: 131 CPNQYTLSSVLKCCSR--ENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKE-FEY 187

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A   FE +  +D++SWN +I  Y + GD     ++F     +     +  N    G LI 
Sbjct: 188 AESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDV---VSWNTIIDG-LIQ 243

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
             Y  +      L+Q+  MV      S +    AL+                       +
Sbjct: 244 CGYERL-----ALEQLYCMVAHGTEFSPVTFSIALI-----------------------L 275

Query: 263 VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR-----FM 317
           VS   L+E    G+++HG ++  GL     + + LV MY KCG +D + ++ +     F+
Sbjct: 276 VSSLSLVE---VGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFL 332

Query: 318 IGKD-----------SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
              +            VSW++M+SG   NG YE+ +  F +M  + ++    ++ + +S+
Sbjct: 333 RKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISA 392

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSW 426
           CA+ G +  G+QIH    K+GL  D  V ++L+ +Y+ +G L   L +F  + E + V W
Sbjct: 393 CANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLW 452

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
            S+I   A       EA+  +  M   G  PN VTF+ +L A S   + + G + + +++
Sbjct: 453 TSMISGCA-LHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCR-YFRMM 510

Query: 487 K--YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           K  Y++  E     ++++ YG+ G + + +      S       W S +S
Sbjct: 511 KDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLS 560



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 146/585 (24%), Positives = 261/585 (44%), Gaps = 78/585 (13%)

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR-GDTISVFKLFSRMQRE 184
           +N L+ +Y     + D A ++F+EI  ++  +W  +IS +++  G +  VF LF  MQ +
Sbjct: 70  ANYLLTLYVKS-SNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQAD 128

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G      PN+YT  S++     S  +     + I A + + G+  D+ + ++++  + + 
Sbjct: 129 G----ACPNQYTLSSVLKCC--SRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKC 182

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
             F YA   FE MI+K+VVS N +                             +  Y + 
Sbjct: 183 KEFEYAESFFELMIEKDVVSWNIM-----------------------------IGAYLRE 213

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G ++ S  +FR    KD VSWNT+I GL Q G    A+     M   G   S  +    L
Sbjct: 214 GDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIAL 273

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF------FLM 418
              +SL  + +G+Q+HG  L  GL+SD  + ++L+ +Y   G + +   +       FL 
Sbjct: 274 ILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLR 333

Query: 419 ----------PEHDQVSWNSVI------GAFADS----EALVSEAVKYYLDMRRAGWSPN 458
                     P+   VSW+S++      G + D      ++V E +   +D+R       
Sbjct: 334 KGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELI--VVDIR------- 384

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
             T   I++A ++  + + G Q+HA + K  +  +  + ++L+  Y K G +DD   IF 
Sbjct: 385 --TVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFE 442

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
           ++ E  + V W SMISG   +    +A++L   M+  G   +  TF  VL+AC+ V  +E
Sbjct: 443 QIKE-PNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIE 501

Query: 579 RGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISG 636
            G            +  +V   +++V++Y + G +  A  F     + +  S W S +S 
Sbjct: 502 EGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSS 561

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
              H + +   ++ S+M L     D   ++ + + CS     DE 
Sbjct: 562 CRLHKNFNMGKSV-SEMLLQSAPSDPDAYILLSNMCSSNHQWDEA 605



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 207/480 (43%), Gaps = 49/480 (10%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S L S  S+G     + +HG   K G    ++ +N LL+LY  +  L    K+F  +   
Sbjct: 37  SFLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHK 96

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           +  +W  +I  FA +          + +M+  G  PN  T  ++L   S  +  + G  +
Sbjct: 97  NTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGI 156

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER------------------ 523
           HA +++  V  +  +EN++L  Y KC E +  E  F  M E+                  
Sbjct: 157 HAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDV 216

Query: 524 ------------RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
                       +D VSWN++I G I       A+  ++ M+  G      TF+  L   
Sbjct: 217 EKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILV 276

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR------ 625
           +S++ +E G ++H   +   L  D  I S+LV+MY KCGR+D AS     +P+       
Sbjct: 277 SSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGN 336

Query: 626 ----------NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
                      + SW+SM+SGY  +G  +  +  F  M  +  + D  T   ++SAC++A
Sbjct: 337 FGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANA 396

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           G+++ G K   +  Q  GL       S ++D+  ++G LD       ++   PN ++W +
Sbjct: 397 GILEFG-KQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIK-EPNVVLWTS 454

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           ++  C      K  +      +   + P N V +V + N  +  G  E+  +  + MK+ 
Sbjct: 455 MISGCALHGQGKEAISLFEGMLNLGIIP-NEVTFVGVLNACSHVGLIEEGCRYFRMMKDT 513



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 188/435 (43%), Gaps = 85/435 (19%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  IL++G   DV L N+++++Y++  +   A   F+ M +++ VSW  ++  Y  
Sbjct: 153 GKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLR 212

Query: 64  KGMSNEACKMFKE---------------MVRAGFLLNRYALGSV---LRACQECGPSGF- 104
           +G   ++ +MF+                +++ G+   R AL  +   +    E  P  F 
Sbjct: 213 EGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGY--ERLALEQLYCMVAHGTEFSPVTFS 270

Query: 105 ------------KFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIET 152
                       + G Q+H  VL      DG + + L+ MYG C    D A  I +++  
Sbjct: 271 IALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKC-GRMDKASTILKDVPL 329

Query: 153 RDL----------------ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
             L                +SW+S++S Y   G      K F  M  E     ++    T
Sbjct: 330 NFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIR----T 385

Query: 197 FGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
             ++I+A A + +L      +QI A ++K GL  D YVGS+L+  +++ G+   A  IFE
Sbjct: 386 VATIISACANAGILE---FGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFE 442

Query: 256 QMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGLFDMVAVGN-----GLVNMYAKCGTI 307
           Q+ + NVV    ++ G     +GKE        G+ ++  + N     G++N  +  G I
Sbjct: 443 QIKEPNVVLWTSMISGCALHGQGKEAISLF--EGMLNLGIIPNEVTFVGVLNACSHVGLI 500

Query: 308 DDSRSVFRFM-----IGKDSVSWNTMISGLDQNG--------CYEEAIMNFCAMRRDGLM 354
           ++    FR M     I  +   + +M++   + G         +E +I +F ++ R  L 
Sbjct: 501 EEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLS 560

Query: 355 S----SNFSLISTLS 365
           S     NF++  ++S
Sbjct: 561 SCRLHKNFNMGKSVS 575


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/572 (40%), Positives = 353/572 (61%), Gaps = 7/572 (1%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L+ C  L  +  G+ IH        + D+ + N +L++YA  G L     +F  MP  D 
Sbjct: 112 LNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDM 171

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSW  +I  ++ S    SEA+  +  M   G+ PN  T  ++L A+ +      G Q+HA
Sbjct: 172 VSWTVLISGYSQS-GQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA 230

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
             +KY       + ++LL  Y +   M + + IF  ++ + + VSWN++I+G+       
Sbjct: 231 FSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-NVVSWNALIAGHARKGEGE 289

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
             M L   M+++G    HFT+++VL ACAS  +LE+G  VHA  +++  +    IG+ L+
Sbjct: 290 HVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLI 348

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           DMY+K G I  A + F  +  +++ SWNS+ISGYA+HG G +AL LF QM      P+ +
Sbjct: 349 DMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEI 408

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TF+ VL+ACSH+GL+DEG  +F+ M + + +  Q+     +VDLLGRAG L++  +FI +
Sbjct: 409 TFLSVLTACSHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEE 467

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           MPI P + +W  +LGAC R + +  +LG  AA  +FE++P ++  +VLL+N+YAS G+  
Sbjct: 468 MPIKPTAAVWGALLGAC-RMH-KNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLS 525

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
           D AK RK MKE+ VKKE  CSWV +++ VHVFVA D+SHP ++ I    ++++ K+++ G
Sbjct: 526 DAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIG 585

Query: 844 YVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFK 902
           YVP T   LF +  + +E  + YHSEK+A+AF VL     L IRI KN+R+CGDCHSAFK
Sbjct: 586 YVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFK 645

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           F S+++GREI++RD+NRFHHF  G CSC DYW
Sbjct: 646 FASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 209/401 (52%), Gaps = 9/401 (2%)

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
           G+    R ++ +M+ K        +   ++G+ +H ++  S   D + + N ++NMYAKC
Sbjct: 99  GSLEPERTLYSKMLNKCTY-----LRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKC 153

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G++++++ +F  M  KD VSW  +ISG  Q+G   EA+  F  M   G   + F+L S L
Sbjct: 154 GSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLL 213

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +  +      G+Q+H   LK G D +V V ++LL +YA   ++     +F  +   + V
Sbjct: 214 KASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVV 273

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           SWN++I   A  +      ++ +  M R G+ P   T+ ++LA ASS S+ + G  VHA 
Sbjct: 274 SWNALIAGHA-RKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASSGSLEQ-GKWVHAH 331

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
           VIK        I N L+  Y K G + D +K+F R+  ++D VSWNS+ISGY  + L  +
Sbjct: 332 VIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLV-KQDIVSWNSIISGYAQHGLGAE 390

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
           A+ L   M++   + +  TF +VL+AC+    L+ G        +  +E  V     +VD
Sbjct: 391 ALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVD 450

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYARHGHGD 644
           +  + GR++ A++F + MP++   + W +++     H + D
Sbjct: 451 LLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMD 491



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 179/370 (48%), Gaps = 48/370 (12%)

Query: 104 FKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS 163
            K G  +H  +  S    D ++ N ++ MY  C  S + A+ +F+++ T+D++SW  +IS
Sbjct: 121 LKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKC-GSLEEAQDLFDKMPTKDMVSWTVLIS 179

Query: 164 VYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVK 223
            YSQ G       LF +M   GF    +PNE+T  SL+ A  S      +  +Q+ A   
Sbjct: 180 GYSQSGQASEALALFPKMLHLGF----QPNEFTLSSLLKA--SGTGPSDHHGRQLHAFSL 233

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------- 272
           K G   +++VGS+L+  +AR  +   A+ IF  +  KNVVS N L+ G            
Sbjct: 234 KYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMR 293

Query: 273 -----------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
                                         +GK VH ++I+SG   +  +GN L++MYAK
Sbjct: 294 LFXQMLRQGFEPTHFTYSSVLACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAK 353

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
            G+I D++ VFR ++ +D VSWN++ISG  Q+G   EA+  F  M +  +  +  + +S 
Sbjct: 354 SGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSV 413

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHD 422
           L++C+  G +  GQ       K  +++ V+    ++ L   AG L+   K    MP +  
Sbjct: 414 LTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPT 473

Query: 423 QVSWNSVIGA 432
              W +++GA
Sbjct: 474 AAVWGALLGA 483



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 151/270 (55%), Gaps = 10/270 (3%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H  I    F  D+ L N ++N+Y + G L  A  LFD+MP ++ VSW  ++SGY
Sbjct: 122 KQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGY 181

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G ++EA  +F +M+  GF  N + L S+L+A    GPS    G Q+H   LK     
Sbjct: 182 SQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA-SGTGPSD-HHGRQLHAFSLKYGYDM 239

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V + L+ MY       + A+ IF  +  ++++SWN++I+ ++++G+   V +LF +M
Sbjct: 240 NVHVGSSLLDMYARWAHMRE-AKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQM 298

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            R+GF    +P  +T+ S++  A S  L      + + A V K+G     Y+G+ L+  +
Sbjct: 299 LRQGF----EPTHFTYSSVLACASSGSLEQG---KWVHAHVIKSGGQPIAYIGNTLIDMY 351

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           A+ G+   A+K+F +++++++VS N ++ G
Sbjct: 352 AKSGSIKDAKKVFRRLVKQDIVSWNSIISG 381



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 155/321 (48%), Gaps = 20/321 (6%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H   LK+G+  +V + ++L+++Y R   +  A  +F+ +  +N VSW  +++G+  K
Sbjct: 226 RQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARK 285

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G      ++F +M+R GF    +   SVL AC   G    + G  VH  V+KS       
Sbjct: 286 GEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSG--SLEQGKWVHAHVIKSGGQPIAY 342

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           + N LI MY       D A+++F  +  +D++SWNSIIS Y+Q G      +LF +M   
Sbjct: 343 IGNTLIDMYAKSGSIKD-AKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQM--- 398

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             +  ++PNE TF S++TA   S L   G Y  +    ++KK  + + +     +V    
Sbjct: 399 -LKAKVQPNEITFLSVLTACSHSGLLDEGQYYFE----LMKKHKIEAQVAHHVTVVDLLG 453

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGR-RKGKEVH-GYLIRSGLFDMVAVGNG---- 296
           R G    A K  E+M  K   ++ G + G  R  K +  G      +F++    +G    
Sbjct: 454 RAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVL 513

Query: 297 LVNMYAKCGTIDDSRSVFRFM 317
           L N+YA  G + D+  V + M
Sbjct: 514 LSNIYASAGRLSDAAKVRKMM 534



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 90/179 (50%), Gaps = 2/179 (1%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           ++ +L+ C  +  L++G  +HA    +  E D+V+ + +++MY+KCG ++ A   FD MP
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            +++ SW  +ISGY++ G   +AL LF +M   G  P+  T   +L A S  G  D   +
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA-SGTGPSDHHGR 226

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
              + S  YG    +   S ++D+  R   + + +   N +    N + W  ++    R
Sbjct: 227 QLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLA-AKNVVSWNALIAGHAR 284



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 54/99 (54%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K G     ++ NTLI++Y + G +  A K+F  +  ++ VSW  I+SGY
Sbjct: 323 EQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGY 382

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G+  EA ++F++M++A    N     SVL AC   G
Sbjct: 383 AQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSG 421


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 269/779 (34%), Positives = 410/779 (52%), Gaps = 116/779 (14%)

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
           L+  + +  N  YAR++FE++   + ++                                
Sbjct: 54  LLEMYCKSSNLVYARQLFEEIPNPDAIAR-----------------------------TT 84

Query: 297 LVNMYAKCGTIDDSRSVFR--FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           L+  Y   G ++  R +F    +  +DSV +N MI+G   NG    A+  F AMRRD   
Sbjct: 85  LITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFR 144

Query: 355 SSNFSLISTLSSCAS-LGWIMLGQQIHGEGLKLGLDS-DVSVSNALLSLYA--------D 404
             +F+  S LS+    +G      Q+H   +K G+     SV NALLS+Y          
Sbjct: 145 PDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIS 204

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS----------EALV-------------- 440
              +    K+F  MP+ D+++W ++I  +  +          EA+V              
Sbjct: 205 CSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGY 264

Query: 441 ------SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV-ANE 493
                  EA+     MR  G   + +T+  I++A ++    ++G QVHA ++K  +  N 
Sbjct: 265 VHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNH 324

Query: 494 T---TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN----------E 540
           +   ++ NAL++ Y K  ++D+  KIF  M   R+ ++WN+++SGY++           E
Sbjct: 325 SFCLSVSNALITLYCKNNKVDEARKIFYAMPV-RNIITWNAILSGYVNAGRMEEAKSFFE 383

Query: 541 LLPKAMNLVWFMMQRG----------------QRLD-----HFTFATVLSACASVATLER 579
            +P    L   +M  G                 RLD      F FA  L+AC+ +  LE 
Sbjct: 384 EMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALEN 443

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G ++HA  V    E  + +G+A++ MY+KCG ++ A   F  MP  ++ SWNSMI+   +
Sbjct: 444 GRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQ 503

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
           HGHG KA+ LF QM  +G  PD +TF+ VL+ACSHAGLV++G  +F SM + YG+ P  +
Sbjct: 504 HGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCED 563

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            ++ MVDL  RAG        I+ MP  P + +W  +L A CR +    +LG +AA  LF
Sbjct: 564 HYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALL-AGCRIH-GNMDLGIEAAEQLF 621

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           ++ PQN   YVLL+N+YA  G+W +VAK RK M++  V+KE  CSW+ +++ VHVF+  D
Sbjct: 622 KLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDD 681

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR 879
           + HPE   +Y  L++L  +M+  GY+P TKF L D+E E KE  +S HSEK+AV F +  
Sbjct: 682 DVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIM- 740

Query: 880 NSKLP----IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             KLP    +R+ KN+R+CGDCH+AFKF+SK+  REI++RD  RFHHF +G CSC DYW
Sbjct: 741 --KLPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 147/560 (26%), Positives = 249/560 (44%), Gaps = 127/560 (22%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVSGYTHKGMSNEACKMFKE 76
           D     TLI  Y  +G+L    ++F+  P   R+SV +  +++GY H G  + A ++F+ 
Sbjct: 78  DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137

Query: 77  MVRAGFLLNRYALGSVLRAC-------QECGPSGFKFGMQVHCLVLKSNQ-TFDGLVSNV 128
           M R  F  + +   SVL A        Q+CG        Q+HC V+K+        V N 
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCG--------QMHCAVVKTGMGCVSSSVLNA 189

Query: 129 LIAMY-------GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           L+++Y       G    +   AR++F+E+  RD ++W ++I+ Y +  D     ++F  M
Sbjct: 190 LLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAM 249

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSY---LLQQILAMVKKA---GLLSDLYVGS 235
                              + AA+++++SG       Q+ L + +K    G+  D    +
Sbjct: 250 VEN----------------LGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYT 293

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFD----MV 291
            ++S  A +G+F        QM                 GK+VH Y++++ L       +
Sbjct: 294 TIISACANVGSF--------QM-----------------GKQVHAYILKNELNPNHSFCL 328

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN------------------------- 326
           +V N L+ +Y K   +D++R +F  M  ++ ++WN                         
Sbjct: 329 SVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVK 388

Query: 327 ------TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
                  MISGL QNG  +E +  F  MR DG    +F+    L++C+ LG +  G+Q+H
Sbjct: 389 NLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLH 448

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
            + + LG +S +SV NA++S+YA  G +     VF  MP  D VSWNS+I A       V
Sbjct: 449 AQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGV 508

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
            +A++ +  M + G  P+ +TF+ +L A S   + + G                   N++
Sbjct: 509 -KAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYF---------------NSM 552

Query: 501 LSCYGKCGEMDDCEKIFARM 520
           L  YG    +  CE  +ARM
Sbjct: 553 LESYG----ITPCEDHYARM 568



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 151/358 (42%), Gaps = 57/358 (15%)

Query: 5   KLFHLQILKHGFAYDVFLC----NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           K  H  ILK+    +   C    N LI +Y +   +  A K+F  MP RN ++W  I+SG
Sbjct: 309 KQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSG 368

Query: 61  YTH-------------------------------KGMSNEACKMFKEMVRAGFLLNRYAL 89
           Y +                                G  +E  K+FK+M   GF    +A 
Sbjct: 369 YVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAF 428

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
              L AC   G    + G Q+H  ++         V N +I+MY  C    + A  +F  
Sbjct: 429 AGALTACSVLG--ALENGRQLHAQLVHLGYESSLSVGNAMISMYAKC-GVVEAAESVFVT 485

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS-- 207
           + + DL+SWNS+I+   Q G  +   +LF +M +EG    + P+  TF +++TA   +  
Sbjct: 486 MPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEG----VFPDRITFLTVLTACSHAGL 541

Query: 208 VLSGSYLLQQILAMVKKAGLLS--DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
           V  G +      +M++  G+    D Y  + +V  F R G F YAR + + M  K    +
Sbjct: 542 VEKGRHYFN---SMLESYGITPCEDHY--ARMVDLFCRAGMFSYARIVIDSMPSKPGAPV 596

Query: 266 -NGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFRFM 317
              L+ G R  G    G      LF ++   +G    L N+YA  G  ++   V + M
Sbjct: 597 WEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLM 654



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 52/99 (52%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H Q++  G+   + + N +I++Y + G + +A  +F  MP  + VSW  +++  
Sbjct: 442 ENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAAL 501

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   +A ++F +M++ G   +R    +VL AC   G
Sbjct: 502 GQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAG 540


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/673 (35%), Positives = 379/673 (56%), Gaps = 17/673 (2%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            + +HG+++++G    + V   LVN Y +CG   D+RS+F  M  K+ V+W  +I+G   
Sbjct: 97  ARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTV 156

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N    EA+  F  M   G   S+++L + L++C++     LG Q+HG  +K    S  S+
Sbjct: 157 NSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSI 216

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            N+L  +YA +G L   ++ F ++P+ + ++W ++I A A+ E      +  +LDM   G
Sbjct: 217 GNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDG 276

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             PN  T  ++++   +     LG QV A   K        ++N+ +  Y + GE D+  
Sbjct: 277 VLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAM 336

Query: 515 KIFARMSERRDEVSWNSMISGYIH------NELLPK-----AMNLVWFMMQRGQRLDHFT 563
           + F  M +    ++WN+MISGY        ++L  +     A+ +   + +   + D FT
Sbjct: 337 RFFEEMDDV-SIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFT 395

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           F+++LS C+S+  LE+G ++HA  ++     DVV+ SALV+MY+KCG I+ A++ F  M 
Sbjct: 396 FSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMS 455

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
           +R + +W SMISGY++HG   +A+ LF  M+  G  P+ +TFV VLSACS+AGL ++   
Sbjct: 456 IRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEH 515

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
           +F  M + Y + P ++ + CMVD+  R G LD    FI +    PN  IW +++ A CR+
Sbjct: 516 YFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLV-AGCRS 574

Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
           +    EL   AA+ L E+ P+    YVLL NMY S  +W DVA+ RK MK+  +      
Sbjct: 575 HG-NMELAFYAADRLIELRPKGIETYVLLLNMYISNERWHDVARVRKLMKQEGLGVLMDR 633

Query: 804 SWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDL 863
           SW+T+KD V+ F A D++H   D +Y+ L+ L +K +  GY P     L D E + K   
Sbjct: 634 SWITIKDKVYFFKANDKTHELSDELYQLLENLLEKAKTIGYEPYQSAELSDSEDDKKPPA 693

Query: 864 --VSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRF 920
             V +HSE++AVA  L +      +R+ KN+ +C DCHS+ KF S +  REIV+RDS R 
Sbjct: 694 GSVRHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKFFSLLANREIVVRDSKRL 753

Query: 921 HHFNDGKCSCGDY 933
           H F DG+CSCGD+
Sbjct: 754 HKFKDGRCSCGDF 766



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 231/479 (48%), Gaps = 57/479 (11%)

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK--------- 274
           K G  +D++V ++LV+ + R G    AR +F+QM +KNVV+   L+ G            
Sbjct: 106 KTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALE 165

Query: 275 --------------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
                                           G +VHGY I+     + ++GN L  MYA
Sbjct: 166 VFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYA 225

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE-AIMNFCAMRRDGLMSSNFSLI 361
           K G+++ +   FR +  K+ ++W TMIS   ++  Y E  +  F  M  DG++ + F+L 
Sbjct: 226 KSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLT 285

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S +S C +   + LG+Q+     K+G  +++ V N+ + LY   G     ++ F  M + 
Sbjct: 286 SVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDV 345

Query: 422 DQVSWNSVIGAFAD----------SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
             ++WN++I  +A           + +   +A+K + +++R+   P+  TF +IL+  SS
Sbjct: 346 SIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSS 405

Query: 472 FSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
               + G Q+HAQ IK    ++  + +AL++ Y KCG ++D  K F  MS  R  V+W S
Sbjct: 406 MMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMS-IRTLVTWTS 464

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC 591
           MISGY  +    +A+ L   M   G R +  TF  VLSAC S A L    E +   ++  
Sbjct: 465 MISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSAC-SYAGLAEKAEHYFDMMKEE 523

Query: 592 LEFDVVIG--SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKAL 647
            + + ++     +VDM+ + GR+D A  F        N   W+S+++G   HG+ + A 
Sbjct: 524 YKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAF 582



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 197/425 (46%), Gaps = 70/425 (16%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H  ++K G + D+F+  +L+N Y+R G    A  LFD+MP++N V+W  +++GYT 
Sbjct: 97  ARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTV 156

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                EA ++F EM+ AG   + Y LG++L AC     +    G QVH   +K       
Sbjct: 157 NSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACS--ASNNADLGSQVHGYTIKYRALSIT 214

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISV-FKLFSRMQ 182
            + N L  MY     S + A R F  +  +++I+W ++IS  ++  +   +   LF  M 
Sbjct: 215 SIGNSLCRMYAKS-GSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDML 273

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL----QQILAMVKKAGLLSDLYVGSALV 238
            +G    + PNE+T  S+++      L G+ L     +Q+ A   K G  +++ V ++ +
Sbjct: 274 MDG----VLPNEFTLTSVMS------LCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTM 323

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--------------RRKG--------- 275
             + R G    A + FE+M   ++++ N ++ G              R +G         
Sbjct: 324 YLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRN 383

Query: 276 -----------------------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
                                        +++H   I++G    V V + LVNMY KCG 
Sbjct: 384 LKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGC 443

Query: 307 IDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
           I+D+   F  M  +  V+W +MISG  Q+G  +EAI  F  MR  G+  +  + +  LS+
Sbjct: 444 IEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSA 503

Query: 367 CASLG 371
           C+  G
Sbjct: 504 CSYAG 508



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/512 (25%), Positives = 231/512 (45%), Gaps = 23/512 (4%)

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM------NFCAMRRDGLM 354
           +   G  D  R     +   D  +WN       QNG   EA +         AM R+G  
Sbjct: 16  FPAAGGADSRRPPPSSVSAADKNNWNGRSIQAAQNGSTMEAPLRPLDVGEAMAMLREGKT 75

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
             +   +  L  C   G +   + +HG  +K G  +D+ V+ +L++ Y   G       +
Sbjct: 76  VQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSL 135

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  MPE + V+W ++I  +  +  L+ EA++ +++M  AG  P+  T   +L A S+ + 
Sbjct: 136 FDQMPEKNVVTWTALITGYTVNSQLL-EALEVFVEMLEAGRYPSHYTLGAMLNACSASNN 194

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
             LG QVH   IKY   + T+I N+L   Y K G ++   + F RM   ++ ++W +MIS
Sbjct: 195 ADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAF-RMVPDKNVITWTTMIS 253

Query: 535 GYIHNELLPK-AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
               +E   +  + L   M+  G   + FT  +V+S C +   L  G +V A   +   +
Sbjct: 254 ACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQ 313

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR-----------HGH 642
            ++ + ++ + +Y + G  D A RFF+ M   ++ +WN+MISGYA+              
Sbjct: 314 TNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSR 373

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
           G +AL +F  +K     PD  TF  +LS CS    +++G +   + +   G +  +   S
Sbjct: 374 GFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQG-EQIHAQTIKTGFLSDVVVNS 432

Query: 703 CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
            +V++  + G ++   +   +M I   +L+  T + +    + R  E  +   +M F   
Sbjct: 433 ALVNMYNKCGCIEDATKAFVEMSI--RTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGV 490

Query: 763 PQNAVNYVLLANMYASGGKWEDVAKARKAMKE 794
             N + +V + +  +  G  E        MKE
Sbjct: 491 RPNEITFVCVLSACSYAGLAEKAEHYFDMMKE 522



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 128/290 (44%), Gaps = 53/290 (18%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH-------- 63
            K G   ++ + N+ + +Y+R G+   A + F+EM D + ++W  ++SGY          
Sbjct: 308 FKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDD 367

Query: 64  ---KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
              +    +A K+F+ + R+    + +   S+L  C        + G Q+H   +K+   
Sbjct: 368 LHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSM--MALEQGEQIHAQTIKTGFL 425

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D +V++ L+ MY  C    D A + F E+  R L++W S+IS YSQ G      +LF  
Sbjct: 426 SDVVVNSALVNMYNKCGCIED-ATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFED 484

Query: 181 MQREGFRYSLKPNEYTFGSLITAA-----------YSSVLSGSYLLQQIL---------- 219
           M+  G R    PNE TF  +++A            Y  ++   Y ++ I+          
Sbjct: 485 MRFAGVR----PNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMF 540

Query: 220 ----------AMVKKAGLLSDLYVGSALVSGFARLGN----FYYARKIFE 255
                     A +++ G   +  + S+LV+G    GN    FY A ++ E
Sbjct: 541 VRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIE 590


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 269/779 (34%), Positives = 410/779 (52%), Gaps = 116/779 (14%)

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
           L+  + +  N  YAR++FE++   + ++                                
Sbjct: 54  LLEMYCKSSNVVYARQLFEEIPNPDAIAR-----------------------------TT 84

Query: 297 LVNMYAKCGTIDDSRSVFR--FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           L+  Y   G ++  R +F    +  +DSV +N MI+G   NG    A+  F AMRRD   
Sbjct: 85  LITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFR 144

Query: 355 SSNFSLISTLSSCAS-LGWIMLGQQIHGEGLKLGLDS-DVSVSNALLSLYA--------D 404
             +F+  S LS+    +G      Q+H   +K G+     SV NALLS+Y          
Sbjct: 145 PDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIP 204

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS----------EALV-------------- 440
              +    K+F  MP+ D+++W ++I  +  +          EA+V              
Sbjct: 205 CSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGY 264

Query: 441 ------SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV-ANE 493
                  EA+     MR  G   + +T+  I++A ++    ++G Q+HA ++K  +  N 
Sbjct: 265 VHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNH 324

Query: 494 T---TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN----------E 540
           +   ++ NAL++ Y K  ++D+  KIF  M   R+ ++WN+++SGY++           E
Sbjct: 325 SFCLSVSNALITLYCKNNKVDEARKIFYAMPV-RNIITWNAILSGYVNAGRMEEAKSFFE 383

Query: 541 LLPKAMNLVWFMMQRG----------------QRLD-----HFTFATVLSACASVATLER 579
            +P    L   +M  G                 RLD      F FA  L+AC+ +  LE 
Sbjct: 384 EMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALEN 443

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G ++HA  V    E  + +G+A++ MY+KCG ++ A   F  MP  ++ SWNSMI+   +
Sbjct: 444 GRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQ 503

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
           HGHG KA+ LF QM  +G  PD +TF+ VL+ACSHAGLV++G  +F SM + YG+ P  +
Sbjct: 504 HGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCED 563

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            ++ MVDL  RAG        I+ MP  P + +W  +L A CR +    +LG +AA  LF
Sbjct: 564 HYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALL-AGCRIH-GNMDLGIEAAEQLF 621

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           ++ PQN   YVLL+N+YA  G+W DVAK RK M++  V+KE  CSW+ +++ VHVF+  D
Sbjct: 622 KLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDD 681

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR 879
           + HPE   +Y  L++L  +M+  GY+P TKF L D+E E KE  +S HSEK+AV F +  
Sbjct: 682 DVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIM- 740

Query: 880 NSKLP----IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             KLP    +R+ KN+R+CGDCH+AFKF+SK+  REI++RD  RFHHF +G CSC DYW
Sbjct: 741 --KLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 146/562 (25%), Positives = 250/562 (44%), Gaps = 127/562 (22%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVSGYTHKGMSNEACKMFKE 76
           D     TLI  Y  +G+L    ++F+  P   R+SV +  +++GY H G  + A ++F+ 
Sbjct: 78  DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137

Query: 77  MVRAGFLLNRYALGSVLRAC-------QECGPSGFKFGMQVHCLVLKSNQ-TFDGLVSNV 128
           M R  F  + +   SVL A        Q+CG        Q+HC V+K+        V N 
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCG--------QMHCAVVKTGMGCVSSSVLNA 189

Query: 129 LIAMY-------GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           L+++Y       G    +   AR++F+E+  RD ++W ++I+ Y +  D     ++F  M
Sbjct: 190 LLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAM 249

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSY---LLQQILAMVKKA---GLLSDLYVGS 235
                              + AA+++++SG       Q+ L + +K    G+  D    +
Sbjct: 250 VEN----------------LGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYT 293

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFD----MV 291
            ++S  A +G+F        QM                 GK++H Y++++ L       +
Sbjct: 294 TIISACANVGSF--------QM-----------------GKQMHAYILKNELNPNHSFCL 328

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN------------------------- 326
           +V N L+ +Y K   +D++R +F  M  ++ ++WN                         
Sbjct: 329 SVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVK 388

Query: 327 ------TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
                  MISGL QNG  +E +  F  MR DG    +F+    L++C+ LG +  G+Q+H
Sbjct: 389 NLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLH 448

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
            + + LG +S +SV NA++S+YA  G +     VF  MP  D VSWNS+I A       V
Sbjct: 449 AQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGV 508

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
            +A++ +  M + G  P+ +TF+ +L A S   + + G                   N++
Sbjct: 509 -KAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYF---------------NSM 552

Query: 501 LSCYGKCGEMDDCEKIFARMSE 522
           L  YG    +  CE  +ARM +
Sbjct: 553 LESYG----ITPCEDHYARMVD 570



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 151/358 (42%), Gaps = 57/358 (15%)

Query: 5   KLFHLQILKHGFAYDVFLC----NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           K  H  ILK+    +   C    N LI +Y +   +  A K+F  MP RN ++W  I+SG
Sbjct: 309 KQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSG 368

Query: 61  YTH-------------------------------KGMSNEACKMFKEMVRAGFLLNRYAL 89
           Y +                                G  +E  K+FK+M   GF    +A 
Sbjct: 369 YVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAF 428

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
              L AC   G    + G Q+H  ++         V N +I+MY  C    + A  +F  
Sbjct: 429 AGALTACSVLG--ALENGRQLHAQLVHLGYESSLSVGNAMISMYAKC-GVVEAAESVFVT 485

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS-- 207
           + + DL+SWNS+I+   Q G  +   +LF +M +EG    + P+  TF +++TA   +  
Sbjct: 486 MPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEG----VFPDRITFLTVLTACSHAGL 541

Query: 208 VLSGSYLLQQILAMVKKAGLLS--DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
           V  G +      +M++  G+    D Y  + +V  F R G F YAR + + M  K    +
Sbjct: 542 VEKGRHYFN---SMLESYGITPCEDHY--ARMVDLFCRAGMFSYARIVIDSMPSKPGAPV 596

Query: 266 -NGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFRFM 317
              L+ G R  G    G      LF ++   +G    L N+YA  G  +D   V + M
Sbjct: 597 WEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLM 654



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 52/99 (52%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H Q++  G+   + + N +I++Y + G + +A  +F  MP  + VSW  +++  
Sbjct: 442 ENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAAL 501

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   +A ++F +M++ G   +R    +VL AC   G
Sbjct: 502 GQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAG 540


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/581 (40%), Positives = 339/581 (58%), Gaps = 10/581 (1%)

Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
           SN++  S L SC +   I  G+Q+H +    G   D  ++  L++LY     LS    +F
Sbjct: 76  SNYA--SLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLF 133

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
             +P+H+   WN +I  +A        AV+ Y  M   G  P+  TF  +L A ++ S  
Sbjct: 134 DRIPKHNIFLWNVLIRGYA-WNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           + G ++H  V++     +  +  AL+  Y KCG +    ++F ++   RD V WNSM++ 
Sbjct: 193 EHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKIL-VRDAVLWNSMLAA 251

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
           Y  N      ++L   M+  G R    T  T +SA A  A L +G E+H    R   E  
Sbjct: 252 YSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESH 311

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
             + +ALVDMY+KCG +  A   F+ + V+ V SWN+MI+GYA HGH  +AL LF +M  
Sbjct: 312 DKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNR 371

Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD 715
               PDH+TFVGVLSACSH GL++EG+  F++M + Y + P ++ ++CMVDLLG +G LD
Sbjct: 372 VAK-PDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLD 430

Query: 716 KIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
           +    I +M + P+S +W  +L +C   AN    ELG  A   L E+EP +A NYV+L+N
Sbjct: 431 EAYNLIMQMKVLPDSGVWGALLNSCKIHAN---VELGEIALERLIELEPDDAGNYVILSN 487

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           +YA  GKWE VAK RK M +  +KK   CSW+ +K+ VH F++GD SHP  D IY +L+ 
Sbjct: 488 IYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELER 547

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRV 893
           +   M++AGY P T     D+E + K ++V  HSE++A+AF +++      + I KNLR+
Sbjct: 548 VGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRI 607

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           C DCH A KFISKI  REI +RD NR+HHF DG CSCGDYW
Sbjct: 608 CEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 189/391 (48%), Gaps = 12/391 (3%)

Query: 273 RKGKEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
           + GK++H  +  +G  FD V +   LVN+Y  C ++  +R +F  +   +   WN +I G
Sbjct: 92  KPGKQLHAQVCLAGFGFDTV-IATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRG 150

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
              NG YE A+  +  M   GL+  NF+    L +CA+L  I  G++IH   ++ G + D
Sbjct: 151 YAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKD 210

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           V V  AL+ +YA  G +    +VF  +   D V WNS++ A++ +       +    +M 
Sbjct: 211 VFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQN-GHPDACLSLCSEMV 269

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             G  P   T +  ++A++  +    G ++H    +    +   ++ AL+  Y KCG + 
Sbjct: 270 LTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVR 329

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
               +F R+  +R  VSWN+MI+GY  +    +A++L +  M R  + DH TF  VLSAC
Sbjct: 330 VARNLFERLGVKR-VVSWNAMITGYAMHGHATEALDL-FEEMNRVAKPDHITFVGVLSAC 387

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIG--SALVDMYSKCGRIDYASRFFDLMPV-RNVY 628
           +    LE G       +R   + D  +   + +VD+    GR+D A      M V  +  
Sbjct: 388 SHGGLLEEGWMFFETMIRD-YKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSG 446

Query: 629 SWNSMISGYARHGH---GDKALTLFSQMKLD 656
            W ++++    H +   G+ AL    +++ D
Sbjct: 447 VWGALLNSCKIHANVELGEIALERLIELEPD 477



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/226 (34%), Positives = 120/226 (53%), Gaps = 1/226 (0%)

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
           +P    + ++L +  +    K G Q+HAQV       +T I   L++ Y  C  +     
Sbjct: 72  TPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARL 131

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F R+  + +   WN +I GY  N     A+ L + M   G   D+FTF  VL ACA+++
Sbjct: 132 LFDRIP-KHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            +E G E+H   V+   E DV +G+AL+DMY+KCG +  A   FD + VR+   WNSM++
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLA 250

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
            Y+++GH D  L+L S+M L G  P   T V  +SA +    + +G
Sbjct: 251 AYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQG 296



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 135/499 (27%), Positives = 225/499 (45%), Gaps = 57/499 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H Q+   GF +D  +   L+N+Y     L+SA  LFD +P  N   W  ++ GY
Sbjct: 92  KPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGY 151

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G    A +++ +M   G + + +    VL+AC     S  + G ++H  V+++    
Sbjct: 152 AWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAAL--SAIEHGREIHEHVVQTGWEK 209

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V   LI MY  C      AR +F++I  RD + WNS+++ YSQ G   +   L S M
Sbjct: 210 DVFVGAALIDMYAKC-GCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEM 268

Query: 182 QREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
              G R    P E T  + I+A A ++ L      +++  +  +    S   V +ALV  
Sbjct: 269 VLTGLR----PTEATLVTAISASADNAALPQG---RELHGLSWRQEFESHDKVKTALVDM 321

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS-GLF-DMVAVGN--- 295
           +A+ G+   AR +FE++  K VVS N ++     G  +HG+   +  LF +M  V     
Sbjct: 322 YAKCGSVRVARNLFERLGVKRVVSWNAMI----TGYAMHGHATEALDLFEEMNRVAKPDH 377

Query: 296 ----GLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEA---IM 343
               G+++  +  G +++    F  MI    +      +  M+  L  +G  +EA   IM
Sbjct: 378 ITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIM 437

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LY 402
               +   G+        + L+SC     + LG +I  E L + L+ D + +  +LS +Y
Sbjct: 438 QMKVLPDSGVWG------ALLNSCKIHANVELG-EIALERL-IELEPDDAGNYVILSNIY 489

Query: 403 ADAGYLSRCLKVFFLMPEHD-----QVSWNSV---IGAF--ADSEALVSEAVKYYLD--- 449
           A AG      K+  LM +         SW  V   + AF   D+   +S+ +   L+   
Sbjct: 490 AQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVG 549

Query: 450 --MRRAGWSPN-GVTFINI 465
             M+ AG+SP+ G  F ++
Sbjct: 550 GLMKEAGYSPSTGSVFHDV 568


>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 260/785 (33%), Positives = 405/785 (51%), Gaps = 105/785 (13%)

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           Y L    YTF   +       L  + L   I   V   G +      + ++S  ++ G  
Sbjct: 2   YRLNLGIYTFSRKVCHQ----LEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRV 57

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
             ARK+F+ M  ++  S N +                             +  YA  G +
Sbjct: 58  DDARKLFDVMPDRDECSWNTM-----------------------------IGAYANSGRL 88

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
           +++R +F     +  ++W+++ISG  + GC  EA+  F  M+ +G   + F+  S L  C
Sbjct: 89  NEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVC 148

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE-HDQVSW 426
           +    +  G+QIH   +K   DS+  V   L+ +YA    +     +F L P+  + V W
Sbjct: 149 SMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLW 208

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
            +++  ++ +     +A++ + DMR  G   N  TF +IL A  S S    G QVH  ++
Sbjct: 209 TAMVTGYSQN-GDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIV 267

Query: 487 KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAM 546
           +        + +AL+  Y KCG++ +  ++   M E  D VSWNSMI G +   L  +A+
Sbjct: 268 RSGFGANVFVGSALVDMYSKCGDLSNARRMLETM-EVDDPVSWNSMIVGCVRQGLGEEAL 326

Query: 547 NLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMY 606
           +L   M  R  ++D FT+ ++                              + +ALVDMY
Sbjct: 327 SLFRIMHLRHMKIDEFTYPSL------------------------------VNNALVDMY 356

Query: 607 SKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFV 666
           +K G  DYA   F+ M  ++V SW S+++G   +G  ++AL LF +M++ G  PD +   
Sbjct: 357 AKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIA 416

Query: 667 GVLSACSHA--------GLVDE----------------------------GFKHFKSMSQ 690
            VLSA  ++        G +++                            G  +F+SM +
Sbjct: 417 AVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDYFQSMEE 476

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
           VYG+ P  E ++CM+DLLGR+G+L + +E +N+M + P++ +W+ +L AC R +    EL
Sbjct: 477 VYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAAC-RVH-GNVEL 534

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
           G +AAN LFE+EP+NAV YVLL+N+Y++ GKWE+ AK R+ MK   V KE GCSW+ M  
Sbjct: 535 GERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSS 594

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
            VH F++ D SHP    IY K+ E+   +++AGYVP   FAL D++ E KE  ++YHSEK
Sbjct: 595 KVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEK 654

Query: 871 IAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +AVAF +LT     PIRI KNLR+CGDCH+A K++S +  R ++LRDSN FHHF +G CS
Sbjct: 655 LAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACS 714

Query: 930 CGDYW 934
           C DYW
Sbjct: 715 CSDYW 719



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 210/428 (49%), Gaps = 54/428 (12%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           NT+I  Y   G L  A KLF E P R+ ++W+ ++SGY   G   EA ++F EM   G  
Sbjct: 76  NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC---LEST 140
            N++  GSVLR C        + G Q+H   +K+    +  V   L+ MY  C   LE  
Sbjct: 136 PNQFTWGSVLRVCSM--YVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILE-- 191

Query: 141 DCARRIFE-EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
             A  +FE   + R+ + W ++++ YSQ GD     + F  M+ EG    ++ N++TF S
Sbjct: 192 --AEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEG----IECNQFTFPS 245

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           ++TA  S  +S      Q+   + ++G  ++++VGSALV  +++ G+   AR++ E M  
Sbjct: 246 ILTACGS--ISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEV 303

Query: 260 KNVVSMNGLMEG-RRKG---------KEVHGYLIRSGLFDMVA-VGNGLVNMYAKCGTID 308
            + VS N ++ G  R+G         + +H   ++   F   + V N LV+MYAK G  D
Sbjct: 304 DDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVNNALVDMYAKRGYFD 363

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
            +  VF  M  KD +SW ++++G   NG YEEA+  FC MR  G+      + + LS   
Sbjct: 364 YAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLS--- 420

Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
                                   ++ N+L+S+YA  G +    KVF  M   D ++W +
Sbjct: 421 ------------------------ALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTA 456

Query: 429 VIGAFADS 436
           +I  +A +
Sbjct: 457 LIVGYAQN 464



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 140/578 (24%), Positives = 248/578 (42%), Gaps = 145/578 (25%)

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N +I  Y +     + AR++F E   R  I+W+S+IS Y + G  +   +LF  MQ EG 
Sbjct: 76  NTMIGAYANSGRLNE-ARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGE 134

Query: 187 RYSLKPNEYTFGSLITAAYSSVL-----------------SGSYLLQQILAMVKK----- 224
           R    PN++T+GS++      VL                 S ++++  ++ M  K     
Sbjct: 135 R----PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCIL 190

Query: 225 -AGLLSDL-------YVGSALVSGFARLGNFYYARKIFEQM----IQKN------VVSMN 266
            A  L +L        + +A+V+G+++ G+ + A + F  M    I+ N      +++  
Sbjct: 191 EAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTAC 250

Query: 267 GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
           G +     G +VHG ++RSG    V VG+ LV+MY+KCG + ++R +   M   D VSWN
Sbjct: 251 GSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWN 310

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
           +MI G  + G  EEA+  F  M    +    F+  S                        
Sbjct: 311 SMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSL----------------------- 347

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
                  V+NAL+ +YA  GY      VF  M + D +SW S++     + +   EA++ 
Sbjct: 348 -------VNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSY-EEALRL 399

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
           + +MR  G  P+ +    +L+A                           ++N+L+S Y K
Sbjct: 400 FCEMRIMGIHPDQIVIAAVLSA---------------------------LDNSLVSMYAK 432

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
           CG ++D  K+F  M E +D ++W ++I GY  N                G+  D+F    
Sbjct: 433 CGCIEDANKVFDSM-EIQDVITWTALIVGYAQN----------------GRGRDYF---- 471

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR- 625
              +   V  ++ G E +AC               ++D+  + G++  A    + M V+ 
Sbjct: 472 --QSMEEVYGIKPGPEHYAC---------------MIDLLGRSGKLMEAKELLNQMAVQP 514

Query: 626 NVYSWNSMISGYARHGH---GDKALTLFSQMKLDGPLP 660
           +   W ++++    HG+   G++A     +++    +P
Sbjct: 515 DATVWKALLAACRVHGNVELGERAANNLFELEPKNAVP 552



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 164/353 (46%), Gaps = 60/353 (16%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD-RNSVSWACIVSG 60
           +  K  H   +K  F  + F+   L+++Y +   +  A  LF+  PD RN V W  +V+G
Sbjct: 155 EKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTG 214

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y+  G  ++A + F++M   G   N++   S+L AC      G  FG QVH  +++S   
Sbjct: 215 YSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACG--FGAQVHGCIVRSGFG 272

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            +  V + L+ MY  C + ++ ARR+ E +E  D +SWNS+I    ++G       LF  
Sbjct: 273 ANVFVGSALVDMYSKCGDLSN-ARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRI 331

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M     R+ +K +E+T+ SL                                V +ALV  
Sbjct: 332 MH---LRH-MKIDEFTYPSL--------------------------------VNNALVDM 355

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRKGKEVHGYLI 283
           +A+ G F YA  +FE+M  K+V+S   L+ G                 R  G      +I
Sbjct: 356 YAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVI 415

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
            + L    A+ N LV+MYAKCG I+D+  VF  M  +D ++W  +I G  QNG
Sbjct: 416 AAVL---SALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNG 465



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 107/243 (44%), Gaps = 42/243 (17%)

Query: 5   KLFHLQILK-HGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           ++ HL+ +K   F Y   + N L+++Y + G    A  +F++M D++ +SW  +V+G  H
Sbjct: 330 RIMHLRHMKIDEFTYPSLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVH 389

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   EA ++F EM   G   ++  + +VL A                            
Sbjct: 390 NGSYEEALRLFCEMRIMGIHPDQIVIAAVLSA---------------------------- 421

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            + N L++MY  C    D A ++F+ +E +D+I+W ++I  Y+Q G     F+    +  
Sbjct: 422 -LDNSLVSMYAKCGCIED-ANKVFDSMEIQDVITWTALIVGYAQNGRGRDYFQSMEEV-- 477

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
               Y +KP    +  +I      +L  S  L +   ++ +  +  D  V  AL++    
Sbjct: 478 ----YGIKPGPEHYACMI-----DLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRV 528

Query: 244 LGN 246
            GN
Sbjct: 529 HGN 531


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 243/685 (35%), Positives = 383/685 (55%), Gaps = 26/685 (3%)

Query: 271 GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
           G    + +HG+++++G    + V   LVN+Y +C +  D+R +F  M  K+ V+W  +I+
Sbjct: 91  GLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALIT 150

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           G   N     A+  F  M   G   S+++L   LS+C++   I LGQQ+HG  +K G D+
Sbjct: 151 GHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADT 210

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
             S+ N+L  LY  +G L   L+ F   P+ + ++W ++I + A+ E  +   +  +LDM
Sbjct: 211 ITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDM 270

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
              G  PN  T  ++++   +     LG QV A   K        ++N+ +  Y + GE 
Sbjct: 271 LEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGET 330

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIH------NELLPK-----AMNLVWFMMQRGQRL 559
           D+  ++F  M +    ++WN+MISGY        ++L  +     A+ L   +++   + 
Sbjct: 331 DEAMRLFEEM-DSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKP 389

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           D FTF+++LS C+++  LE+G ++HA  ++     DVV+ SALV+MY+KCG I+ A++ F
Sbjct: 390 DLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAF 449

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
             MP R   +W SMISGY++HG    A+ LF  M L G  P+ +TFV +LSACS+AGLV+
Sbjct: 450 VEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVE 509

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           E  ++F  M   Y + P ++ + CMVD+  R G LD    FI +    PN  IW +++ A
Sbjct: 510 EAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLV-A 568

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKK 799
            CR++    EL   AA+ L E++P+    YVLL NMY S G+W DVA+ RK  K  +V  
Sbjct: 569 GCRSHG-NMELAFYAADRLLELKPKVIETYVLLLNMYISTGRWRDVARVRKLAKHEDVGV 627

Query: 800 EAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFA--LFDLEP 857
               SW+ ++D V+ F A D +HP+   +Y+ L+ L +K +  GY P       LFD   
Sbjct: 628 LRDRSWIAIRDKVYFFRADDMTHPQATELYQLLENLLEKAKAVGYEPYQNAPELLFD-SK 686

Query: 858 ESKED--------LVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIV 908
           E  +D        L+ +HSE++AVA  +L       +R+ KN+ +C DCHS+ K+ S + 
Sbjct: 687 EGDDDKPAAAAGSLIKHHSERLAVALGLLETPPGATVRVTKNITMCRDCHSSIKYFSLLA 746

Query: 909 GREIVLRDSNRFHHFNDGKCSCGDY 933
            REIV+RDS R H F DG+CSCGD+
Sbjct: 747 NREIVVRDSKRLHKFKDGRCSCGDF 771



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 193/425 (45%), Gaps = 66/425 (15%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H  ++K G A D+F+  +L+NVY+R      A +LFD MPD+N V+W  +++G+T 
Sbjct: 95  ARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTL 154

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                 A ++F EM+  G   + Y LG +L AC          G QVH   +K       
Sbjct: 155 NSEPALALEVFVEMLELGRYPSHYTLGGMLSACS--AARRIDLGQQVHGYSIKYGADTIT 212

Query: 124 LVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISV-FKLFSR 180
            + N L  +Y     LES     R F+    +++I+W ++IS  ++  + + +   LF  
Sbjct: 213 SMGNSLCRLYCKSGDLES---GLRAFKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLD 269

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M   G    + PNE+T  S+++   + +     L +Q+ A   K G  ++L V ++ +  
Sbjct: 270 MLEGG----VMPNEFTLTSVMSLCGARL--DMSLGKQVQAFCYKVGCEANLPVKNSTMYL 323

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG--------------RRKG----------- 275
           + R G    A ++FE+M   ++++ N ++ G              R +G           
Sbjct: 324 YLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLV 383

Query: 276 ---------------------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
                                      +++H   I++G    V V + LVNMY KCG+I+
Sbjct: 384 RSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIE 443

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
            +   F  M  +  V+W +MISG  Q+G  ++AI  F  M   G   +  + +S LS+C+
Sbjct: 444 CATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACS 503

Query: 369 SLGWI 373
             G +
Sbjct: 504 YAGLV 508



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 196/403 (48%), Gaps = 18/403 (4%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M RDG    +   +  L  C   G +   + +HG  +K G  +D+ V+ +L+++Y     
Sbjct: 67  MLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCAS 126

Query: 408 LSRCLKVFFLMPEHDQVSWNSVI-GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
                ++F  MP+ + V+W ++I G   +SE  +  A++ +++M   G  P+  T   +L
Sbjct: 127 SRDARRLFDGMPDKNVVTWTALITGHTLNSEPAL--ALEVFVEMLELGRYPSHYTLGGML 184

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           +A S+     LG QVH   IKY     T++ N+L   Y K G+++   + F + +  ++ 
Sbjct: 185 SACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAF-KGTPDKNV 243

Query: 527 VSWNSMISGYIHNE-LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
           ++W +MIS    +E  L   ++L   M++ G   + FT  +V+S C +   +  G +V A
Sbjct: 244 ITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQA 303

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR------ 639
              +   E ++ + ++ + +Y + G  D A R F+ M   ++ +WN+MISGYA+      
Sbjct: 304 FCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAK 363

Query: 640 -----HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
                   G +AL LF  +      PD  TF  +LS CS    +++G +   + +   G 
Sbjct: 364 DDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQG-EQIHANTIKTGC 422

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
           +  +   S +V++  + G ++   +   +MP T   + W +++
Sbjct: 423 LSDVVVNSALVNMYNKCGSIECATKAFVEMP-TRTPVTWTSMI 464



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 125/519 (24%), Positives = 223/519 (42%), Gaps = 76/519 (14%)

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
           M+R G  +       +L  C E G  G      +H  ++K+    D  V+  L+ +Y  C
Sbjct: 67  MLRDGQTVQSAMYVPLLHRCVEAG--GLGAARALHGHMVKTGTAADMFVATSLVNVYMRC 124

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
             S D ARR+F+ +  +++++W ++I+ ++   +     ++F  M   G RY   P+ YT
Sbjct: 125 ASSRD-ARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELG-RY---PSHYT 179

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
            G +++A   S      L QQ+     K G  +   +G++L   + + G+     + F+ 
Sbjct: 180 LGGMLSAC--SAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKG 237

Query: 257 MIQKNVVSMNGLME--------------------------------------GRRK---- 274
              KNV++   ++                                       G R     
Sbjct: 238 TPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSL 297

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK+V  +  + G    + V N  + +Y + G  D++  +F  M     ++WN MISG  Q
Sbjct: 298 GKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQ 357

Query: 335 --NGCYE---------EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
             +   +         +A+  F  + R  L    F+  S LS C+++  +  G+QIH   
Sbjct: 358 IMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANT 417

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           +K G  SDV V++AL+++Y   G +    K F  MP    V+W S+I  ++       +A
Sbjct: 418 IKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYS-QHGRSQDA 476

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           ++ + DM  +G  PN +TF+++L+A S       G    A+     + NE  IE  L+  
Sbjct: 477 IQLFEDMVLSGARPNEITFVSLLSACS-----YAGLVEEAERYFDMMRNEYHIE-PLVDH 530

Query: 504 YG-------KCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           YG       + G +DD      R     +E  W+S+++G
Sbjct: 531 YGCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAG 569



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 136/292 (46%), Gaps = 56/292 (19%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH-----------KGMSNEACK 72
           N+ + +Y+R G+   A +LF+EM   + ++W  ++SGY             +    +A K
Sbjct: 318 NSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALK 377

Query: 73  MFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAM 132
           +F+++VR+    + +   S+L  C        + G Q+H   +K+    D +V++ L+ M
Sbjct: 378 LFRDLVRSELKPDLFTFSSILSVCSAM--MALEQGEQIHANTIKTGCLSDVVVNSALVNM 435

Query: 133 YGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKP 192
           Y  C  S +CA + F E+ TR  ++W S+IS YSQ G +    +LF  M   G R    P
Sbjct: 436 YNKC-GSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGAR----P 490

Query: 193 NEYTFGSLITAA-----------YSSVLSGSYLLQQIL--------------------AM 221
           NE TF SL++A            Y  ++   Y ++ ++                    + 
Sbjct: 491 NEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSF 550

Query: 222 VKKAGLLSDLYVGSALVSGFARLGN----FYYARKIFE---QMIQKNVVSMN 266
           +K+ G   +  + S+LV+G    GN    FY A ++ E   ++I+  V+ +N
Sbjct: 551 IKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLN 602



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 4/215 (1%)

Query: 528 SWNSMISGYIHNELLPKAMNL--VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
           S  ++ +G + +E  P+ ++      M++ GQ +    +  +L  C     L     +H 
Sbjct: 41  SAQALENGRLEHESPPRPLDAQEAMGMLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHG 100

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
             V+     D+ + ++LV++Y +C     A R FD MP +NV +W ++I+G+  +     
Sbjct: 101 HMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPAL 160

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
           AL +F +M   G  P H T  G+LSACS A  +D G +     S  YG        + + 
Sbjct: 161 ALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLG-QQVHGYSIKYGADTITSMGNSLC 219

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC 740
            L  ++G+L+         P   N + W T++ +C
Sbjct: 220 RLYCKSGDLESGLRAFKGTP-DKNVITWTTMISSC 253


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 268/829 (32%), Positives = 429/829 (51%), Gaps = 64/829 (7%)

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI-ETRDLISWNSIISVYSQR 168
           VH L++ S  +   + S  LI+ Y    +       +F  I  T ++  WNSII   +  
Sbjct: 41  VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVS-VFRSISPTNNVYLWNSIIRALTHN 99

Query: 169 GDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLS---GSYLLQQILAMVKKA 225
           G        ++ M+ +     L+P+ +TF S+I +  + +L    G  + +  + M    
Sbjct: 100 GLFTQALGYYTEMREK----KLQPDAFTFPSVINSC-ARILDLELGCIVHEHAMEM---- 150

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------- 272
           G  SDLY+G+AL+  ++R  +   AR +FE+M  ++ VS N L+ G              
Sbjct: 151 GFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMY 210

Query: 273 ----------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
                                       ++G  VHG + + G+   V +GNGL++MY K 
Sbjct: 211 HKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKF 270

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
             + ++R VF  M  KDSV+WNTMI G  Q G +E ++  F  M  DG +    S+ ST+
Sbjct: 271 ERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTI 329

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +C   G + +G+ +H   +  G + D    N L+ +YA  G L    +VF      D V
Sbjct: 330 RACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSV 389

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           +WNS+I  +  S     E ++ +  M +    P+ VTF+ +L+  S  +    G  +H  
Sbjct: 390 TWNSLINGYTQS-GYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCD 447

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
           VIK+    E  I N+LL  Y KCGEMDD  K+F+ MS   D +SWN++I+  +H +    
Sbjct: 448 VIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH-DIISWNTVIASSVHFDDCTV 506

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
              ++  M   G   D  T   +L  C+ +A   +G E+H    ++  E +V IG+AL++
Sbjct: 507 GFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIE 566

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
           MYSKCG ++   + F  M  ++V +W ++IS +  +G G KAL  F  M+L G LPD V 
Sbjct: 567 MYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVA 626

Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           F+  + ACSH+G+V EG + F  M   Y L P++E ++C+VDLL R+G L + EEFI  M
Sbjct: 627 FIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSM 686

Query: 725 PITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           P+ P++ +W  +L AC  R N   T + ++ +  + E+   +   YVL++N+YA+ GKW+
Sbjct: 687 PMKPDASLWGALLSACRARGN---TNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWD 743

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
            V   R +MK   +KKE G SW+ ++  V+VF  GD+S  + D + + L+ L + M   G
Sbjct: 744 QVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEG 803

Query: 844 YVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNL 891
           YV   +FAL D+E + K D++  HSE++A+AF +L      P+ I   L
Sbjct: 804 YVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLIFPTL 852



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 160/576 (27%), Positives = 276/576 (47%), Gaps = 62/576 (10%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           + H   ++ GF  D+++ N LI++Y R  DL +A  +F+EM +R+SVSW  ++SGY   G
Sbjct: 142 IVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNG 201

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
              +A  M+ +    G + + + + SVL AC        K G+ VH ++ K     D ++
Sbjct: 202 FWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSL--MAVKEGVAVHGVIEKIGIAGDVII 259

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
            N L++MY    E    ARR+F ++  +D ++WN++I  Y+Q G   +  KLF  M  +G
Sbjct: 260 GNGLLSMYFK-FERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DG 317

Query: 186 FRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           F     P+  +  S I A   S  +  G ++ + ++     +G   D    + L+  +A+
Sbjct: 318 F----VPDMLSITSTIRACGQSGDLQVGKFVHKYLIG----SGFECDTVACNILIDMYAK 369

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG-------------------RRK---------- 274
            G+   A+++F+    K+ V+ N L+ G                    RK          
Sbjct: 370 CGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFVLLL 429

Query: 275 -----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      G+ +H  +I+ G    + +GN L+++YAKCG +DD   VF +M   D +
Sbjct: 430 SIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDII 489

Query: 324 SWNTMISGLDQNGCYEEAIMNF---CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           SWNT+I+    +  +++  + F     MR +GLM    +++  L  C+ L     G++IH
Sbjct: 490 SWNTVIA---SSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIH 546

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
           G   K G +S+V + NAL+ +Y+  G L  C+KVF  M E D V+W ++I AF       
Sbjct: 547 GYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFG-MYGEG 605

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-IKYNVANETTIENA 499
            +A+K + DM  +G  P+ V FI  + A S   M K G +   ++   YN+         
Sbjct: 606 KKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYAC 665

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           ++    + G +   E+    M  + D   W +++S 
Sbjct: 666 VVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSA 701



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 233/466 (50%), Gaps = 9/466 (1%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS-WNTMISGLDQ 334
           + VH  +I SGL   V     L++ YA+      S SVFR +   ++V  WN++I  L  
Sbjct: 39  RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTH 98

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG + +A+  +  MR   L    F+  S ++SCA +  + LG  +H   +++G +SD+ +
Sbjct: 99  NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            NAL+ +Y+    L     VF  M   D VSWNS+I  +  S     +A+  Y   R  G
Sbjct: 159 GNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYC-SNGFWEDALDMYHKFRMTG 217

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             P+  T  ++L A  S    K G  VH  + K  +A +  I N LLS Y K   + +  
Sbjct: 218 MVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREAR 277

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM-MQRGQRLDHFTFATVLSACAS 573
           ++F++M+  +D V+WN+MI GY   +L     ++  FM M  G   D  +  + + AC  
Sbjct: 278 RVFSKMA-VKDSVTWNTMICGYA--QLGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQ 334

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
              L+ G  VH   + +  E D V  + L+DMY+KCG +  A   FD    ++  +WNS+
Sbjct: 335 SGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSL 394

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I+GY + G+  + L  F  MK++   PD VTFV +LS  S    +++G +        +G
Sbjct: 395 INGYTQSGYYKEGLESFKMMKMERK-PDSVTFVLLLSIFSQLADINQG-RGIHCDVIKFG 452

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
              +L   + ++D+  + GE+D + +  + M    + + W TV+ +
Sbjct: 453 FEAELIIGNSLLDVYAKCGEMDDLLKVFSYMS-AHDIISWNTVIAS 497



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 229/477 (48%), Gaps = 60/477 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K+    H  I K G A DV + N L+++Y +   L  A ++F +M  ++SV+W  ++ GY
Sbjct: 239 KEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGY 298

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G    + K+F +M+  GF+ +  ++ S +RAC + G    + G  VH  ++ S    
Sbjct: 299 AQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSG--DLQVGKFVHKYLIGSGFEC 355

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG---DTISVFKLF 178
           D +  N+LI MY  C +    A+ +F+  + +D ++WNS+I+ Y+Q G   + +  FK+ 
Sbjct: 356 DTVACNILIDMYAKCGDLL-AAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMM 414

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
            +M+R       KP+  TF  L++    S L+     + I   V K G  ++L +G++L+
Sbjct: 415 -KMER-------KPDSVTFVLLLSIF--SQLADINQGRGIHCDVIKFGFEAELIIGNSLL 464

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMN-------------------------GLMEG-- 271
             +A+ G      K+F  M   +++S N                         GLM    
Sbjct: 465 DVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEA 524

Query: 272 --------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                         RR+GKE+HGY+ +SG    V +GN L+ MY+KCG++++   VF++M
Sbjct: 525 TVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYM 584

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             KD V+W  +IS     G  ++A+  F  M   G++  + + I+ + +C+  G +  G 
Sbjct: 585 KEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGL 644

Query: 378 QIHGE-GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           +          L+  +     ++ L A +G L++  +    MP + D   W +++ A
Sbjct: 645 RFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSA 701


>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/639 (35%), Positives = 372/639 (58%), Gaps = 4/639 (0%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+  H ++++ GL     V   L++MYAKCG +D +  V+  M   D+ + N +IS   +
Sbjct: 132 GRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYAR 191

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG + +A   F  +   G   ++++  + L+ C ++  I  G+Q+H   +K+   S+ +V
Sbjct: 192 NGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAV 251

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            NALL+LY+  G +     VF  + + + +SW + I  F        +A+K +  MR +G
Sbjct: 252 GNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQ-HGDFKKALKQFSMMRESG 310

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             PN  TF  +LA+         G   H QVIK  +A+   +  A++  Y   GEMD+ E
Sbjct: 311 IEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAE 370

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           K F +M      VSWN++I+GY+ NE + KAM     M++     + FT++ +  AC+S 
Sbjct: 371 KQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSF 430

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
            +L   +++H+  +++ +E ++ + S+L++ Y++CG ++ A + F  +   +V SWNS+I
Sbjct: 431 PSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSII 490

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
             Y+++G   KA+ L  +M  +G  P   TF+ VLSACSH+GLV EG + FKSM Q Y +
Sbjct: 491 KAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSI 550

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
            P+    SCMVD+LGRAG+L+   +FI K+ + P + IWR +L A CR N    ++    
Sbjct: 551 QPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAA-CRYN-SNLQMAEYV 608

Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
           A  + ++EP +A  YV L+NMYA  G+W D    R+ M++ E+ KE GCSW+ + + ++ 
Sbjct: 609 AEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMYK 668

Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVA 874
           F + D++HPE   +YEKLK+L ++++D GY P T   L     + KE L+ YHSEK+AV 
Sbjct: 669 FFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPPTTTVLHPESRQPKEQLILYHSEKLAVC 728

Query: 875 F-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREI 912
           F +L+     PIR++KNLRVC DC+S  K+IS+I  R I
Sbjct: 729 FGLLSLPPGKPIRVLKNLRVCLDCYSTMKYISRITDRYI 767



 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 179/536 (33%), Positives = 287/536 (53%), Gaps = 41/536 (7%)

Query: 274  KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
            +G+ +H +L+  GL  +      L++ Y +CG + ++R +F  +   +   W  +     
Sbjct: 821  RGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACA 880

Query: 334  QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            + G YEEA+  F  M+++GL  + F L S L +C  L     G+ +H   LK   +SD  
Sbjct: 881  RRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAY 940

Query: 394  VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
            + +AL+ +Y+  G++ +  +VF  + + D V  N+++  +A     V EA+     M++A
Sbjct: 941  IISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQ-HGFVHEALBLVQKMQQA 999

Query: 454  GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
            G  PN V++                                   N L++ + + G+    
Sbjct: 1000 GVKPNVVSW-----------------------------------NTLIAGFSQVGDKSMV 1024

Query: 514  EKIFARMSE---RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
             ++F  M+      D VSW S+ISG++ N    +  +    M+ +G      T +++L A
Sbjct: 1025 SEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPA 1084

Query: 571  CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
            C +VA L  G E+H   +   +E DV + SALVDMY+KCG I  A   F +MP RN  +W
Sbjct: 1085 CTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTW 1144

Query: 631  NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
            NS+I GYA HG+ ++A+ LF+QM+      DH+TF  VL+ACSHAG+V+ G   F  M +
Sbjct: 1145 NSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQE 1204

Query: 691  VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
             Y + P+LE ++CMVDLLGRAG+L +  + I  MP+ P+  +W  +LGAC   N    EL
Sbjct: 1205 KYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGAC--RNHGNIEL 1262

Query: 751  GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
               AA  LFE+EP++  + +LL+N+YA  G+W + AK +K MK+ +  K  GCSW+
Sbjct: 1263 AEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWI 1318



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 220/420 (52%), Gaps = 15/420 (3%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQM----------IQKNVVSMNGLMEGRRKGKEVH 279
           D    + L+S +AR G F  A ++F Q+              ++++ G +   ++GK++H
Sbjct: 178 DAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLH 237

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
            ++++       AVGN L+ +Y+KCG ++++  VF  +  ++ +SW   I+G  Q+G ++
Sbjct: 238 AHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFK 297

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           +A+  F  MR  G+  + F+    L+SC  +   + G+  H + +K G+ S V V  A++
Sbjct: 298 KALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAII 357

Query: 400 SLYADAGYLSRCLKVFFLMPE-HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
            +Y+  G +    K F  M      VSWN++I  +  +E  + +A++ +  M +   + N
Sbjct: 358 DMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEK-IEKAMEAFCRMVKEDVACN 416

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
             T+ NI  A SSF       Q+H+++IK NV +   + ++L+  Y +CG +++  ++F 
Sbjct: 417 EFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFT 476

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
           ++S+  D VSWNS+I  Y  N    KA+ L+  M++ G +    TF TVLSAC+    ++
Sbjct: 477 QISD-ADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQ 535

Query: 579 RGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISG 636
            G E     V+   ++ +    S +VD+  + G+++ A  F   + ++   S W  +++ 
Sbjct: 536 EGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAA 595



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 224/440 (50%), Gaps = 21/440 (4%)

Query: 5    KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
            +  H  ++  G A   +    L++ Y   G L++A KLFD++P+ N   W  +      +
Sbjct: 823  RALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARR 882

Query: 65   GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            G   EA   F EM + G   N++ L S+L+AC     S  + G  +H ++LK++   D  
Sbjct: 883  GFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHL--SDRRTGENMHTVILKNSFESDAY 940

Query: 125  VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
            + + LI MY  C    + A R+F+ I  +DL+  N+++S Y+Q G       L  +MQ+ 
Sbjct: 941  IISALIYMYSKC-GHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQA 999

Query: 185  GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
            G    +KPN  ++ +LI A +S V   S ++ ++  ++   G+  D+   ++++SGF + 
Sbjct: 1000 G----VKPNVVSWNTLI-AGFSQVGDKS-MVSEVFRLMTANGVEPDVVSWTSVISGFVQN 1053

Query: 245  GNFYYARKIFEQMIQK----NVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVG 294
             + +     F++M+ +    + V+++ L+         R GKE+HGY +  G+   V V 
Sbjct: 1054 FHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVR 1113

Query: 295  NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
            + LV+MYAKCG I +++ +F  M  +++V+WN++I G   +G   EAI  F  M      
Sbjct: 1114 SALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTK 1173

Query: 355  SSNFSLISTLSSCASLGWIMLGQQIHGE-GLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
              + +  + L++C+  G + LG+ +  +   K  ++  +     ++ L   AG LS    
Sbjct: 1174 LDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYD 1233

Query: 414  VFFLMP-EHDQVSWNSVIGA 432
            +   MP E D+  W +++GA
Sbjct: 1234 LIKAMPVEPDKFVWGALLGA 1253



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 139/567 (24%), Positives = 258/567 (45%), Gaps = 72/567 (12%)

Query: 35  DLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM------------VRAGF 82
           DL +A  LF++ P R  VS    ++     G +++  +  KE                GF
Sbjct: 55  DLNNACILFEKTPKRIGVS----ITESHRSGCTDDPEEGVKEAGFFTRNETPHVEFGGGF 110

Query: 83  LLNRYALGSVLRACQECGPSG-FKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD 141
              +Y    V  A   CG  G  + G + HC V+K     D  V   LI MY  C E  D
Sbjct: 111 PHRQY----VFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGE-VD 165

Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
            A R+++++ + D  + N +IS Y++ G  +  F++F ++   G R    PN YT+ +++
Sbjct: 166 SAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTR----PNHYTYSTML 221

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
             A    +S     +Q+ A V K   LS+  VG+AL++ +++ G    A  +FE + Q+N
Sbjct: 222 --AVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRN 279

Query: 262 VVSMNGLMEG-----------------RRKGKE------------------------VHG 280
           ++S    + G                 R  G E                         H 
Sbjct: 280 IISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHT 339

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM-IGKDSVSWNTMISGLDQNGCYE 339
            +I+ G+   V VG  +++MY+  G +D++   F+ M     +VSWN +I+G   N   E
Sbjct: 340 QVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIE 399

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           +A+  FC M ++ +  + F+  +   +C+S   +    QIH   +K  ++S++ V+++L+
Sbjct: 400 KAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLI 459

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
             Y   G L   ++VF  + + D VSWNS+I A++ +     +A+     M   G  P  
Sbjct: 460 EAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQN-GDPWKAIFLLRKMIEEGNKPTS 518

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFA 518
            TF+ +L+A S   + + G +    +++ Y++  E T  + ++   G+ G++++      
Sbjct: 519 XTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIK 578

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKA 545
           +++ +     W  +++   +N  L  A
Sbjct: 579 KLTMKPTASIWRPLLAACRYNSNLQMA 605



 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 209/416 (50%), Gaps = 19/416 (4%)

Query: 129  LIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRY 188
            L++ Y  C + ++ AR++F++I   ++  W  +    ++RG        FS MQ+EG   
Sbjct: 844  LMSFYTECGQLSN-ARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEG--- 899

Query: 189  SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
             L+PN++   S++ A     LS     + +  ++ K    SD Y+ SAL+  +++ G+  
Sbjct: 900  -LRPNQFVLPSILKAC--GHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVE 956

Query: 249  YARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYL------IRSGLFDMVAVGNGLVNMYA 302
             A ++F+ ++ K++V MN ++ G  +   VH  L       ++G+   V   N L+  ++
Sbjct: 957  KACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFS 1016

Query: 303  KCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
            + G       VFR M    +  D VSW ++ISG  QN    E    F  M   G   S+ 
Sbjct: 1017 QVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSV 1076

Query: 359  SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
            ++ S L +C ++  +  G++IHG  + +G++ DV V +AL+ +YA  GY+S    +F++M
Sbjct: 1077 TISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMM 1136

Query: 419  PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
            PE + V+WNS+I  +A+     +EA++ +  M  +    + +TF  +L A S   M +LG
Sbjct: 1137 PERNTVTWNSLIFGYAN-HGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELG 1195

Query: 479  HQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
              +  ++  KY +         ++   G+ G++ +   +   M    D+  W +++
Sbjct: 1196 ESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALL 1251



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 167/316 (52%), Gaps = 5/316 (1%)

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           + S LS C   G + LG++ H   +K+GL SD  V  +L+ +YA  G +   ++V+  M 
Sbjct: 116 VFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMT 175

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             D  + N +I A+A +   V +A + ++ +   G  PN  T+  +LA   + S  + G 
Sbjct: 176 SLDAATCNCLISAYARNGFFV-QAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGK 234

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           Q+HA V+K    +ET + NALL+ Y KCG M++ E +F  +  +R+ +SW + I+G+  +
Sbjct: 235 QLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESL-RQRNIISWTASINGFYQH 293

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
               KA+     M + G   + FTF+ VL++C  V     G   H   ++  +   V +G
Sbjct: 294 GDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVG 353

Query: 600 SALVDMYSKCGRIDYASRFFDLM--PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           +A++DMYS  G +D A + F  M     NV SWN++I+GY  +   +KA+  F +M  + 
Sbjct: 354 TAIIDMYSGLGEMDEAEKQFKQMGRAASNV-SWNALIAGYVLNEKIEKAMEAFCRMVKED 412

Query: 658 PLPDHVTFVGVLSACS 673
              +  T+  +  ACS
Sbjct: 413 VACNEFTYSNIFKACS 428



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 202/419 (48%), Gaps = 57/419 (13%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           + +H  ++K G   D F+C +LI++Y + G++ SA +++D+M   ++ +  C++S Y   
Sbjct: 133 RRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARN 192

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   +A ++F ++   G   N Y   ++L  C     S  + G Q+H  V+K     +  
Sbjct: 193 GFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTI--SAIQEGKQLHAHVVKMQYLSETA 250

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V N L+ +Y  C    + A  +FE +  R++ISW + I+ + Q GD     K FS M+  
Sbjct: 251 VGNALLTLYSKCGMMEE-AEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRES 309

Query: 185 GFRYSLKPNEYTFGSLITAAYSSV---LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           G    ++PNE+TF S++ A+   V   + G     Q++    K G+ S ++VG+A++  +
Sbjct: 310 G----IEPNEFTF-SIVLASCGCVKDFIDGRMFHTQVI----KKGMASGVFVGTAIIDMY 360

Query: 242 ARLGNFYYARKIFEQMIQ-KNVVSMNGLMEGR--------------RKGKE--------- 277
           + LG    A K F+QM +  + VS N L+ G               R  KE         
Sbjct: 361 SGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTY 420

Query: 278 ------------------VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                             +H  LI+S +   + V + L+  Y +CG+++++  VF  +  
Sbjct: 421 SNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISD 480

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            D VSWN++I    QNG   +AI     M  +G   ++ + ++ LS+C+  G +  GQ+
Sbjct: 481 ADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQE 539



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 157/714 (21%), Positives = 296/714 (41%), Gaps = 69/714 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ K  H  ++K  +  +  + N L+ +Y + G +  A  +F+ +  RN +SW   ++G+
Sbjct: 231 QEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGF 290

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   +A K F  M  +G   N +    VL +C  C    F  G   H  V+K     
Sbjct: 291 YQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCG-C-VKDFIDGRMFHTQVIKKGMAS 348

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEI-ETRDLISWNSIISVYSQRGDTISVFKLFSR 180
              V   +I MY S L   D A + F+++      +SWN++I+ Y          + F R
Sbjct: 349 GVFVGTAIIDMY-SGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCR 407

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M +E     +  NE+T+ ++  A  S     + +  QI + + K+ + S+L+V S+L+  
Sbjct: 408 MVKE----DVACNEFTYSNIFKACSSFPSLATTV--QIHSRLIKSNVESNLHVASSLIEA 461

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHG--YLIRSGLFDMVAVGN--- 295
           + + G+   A ++F Q+   +VVS N +++   +  +     +L+R     M+  GN   
Sbjct: 462 YTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRK----MIEEGNKPT 517

Query: 296 --GLVNMYAKC---GTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNF 345
               + + + C   G + + +  F+ M+   S+       + M+  L + G  E A ++F
Sbjct: 518 SXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENA-LDF 576

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             +++  +  +       L++C     + + + +  + L L   +D +V   L ++YA+ 
Sbjct: 577 --IKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLE-PNDATVYVTLSNMYAEV 633

Query: 406 GYLSRCLKVFFLMPEHD-----QVSW---NSVIGAFADSEALVSEAVKYYLDMRR----- 452
           G  +       LM + +       SW   N+ +  F   +    E  K Y  +++     
Sbjct: 634 GRWADAENQRRLMEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQI 693

Query: 453 --AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
              G+SP   T ++               Q   Q+I Y+          L    GK   +
Sbjct: 694 QDIGYSPPTTTVLH-----------PESRQPKEQLILYHSEKLAVCFGLLSLPPGKPIRV 742

Query: 511 -------DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA-MNLVW--FMMQRGQRLD 560
                   DC      +S   D      + +      L+ +A +  V+      R  +  
Sbjct: 743 LKNLRVCLDCYSTMKYISRITDRYIPTPLAAAAAMQSLINRANVYRVYRNISTHRTFQSS 802

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
             T+A  +   A    L RG  +HA  V   L       + L+  Y++CG++  A + FD
Sbjct: 803 SDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFD 862

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
            +P  N+  W  +    AR G  ++AL+ FS+M+ +G  P+      +L AC H
Sbjct: 863 KIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGH 916



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 61/116 (52%)

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           + LS C     +E G   H   V+  L  D  + ++L+DMY+KCG +D A R +D M   
Sbjct: 118 SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSL 177

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           +  + N +IS YAR+G   +A  +F Q+   G  P+H T+  +L+ C     + EG
Sbjct: 178 DAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEG 233



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 54/99 (54%)

Query: 2    KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
            +  K  H   +  G   DV++ + L+++Y + G ++ A  LF  MP+RN+V+W  ++ GY
Sbjct: 1092 RHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGY 1151

Query: 62   THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
             + G  NEA ++F +M  +   L+     +VL AC   G
Sbjct: 1152 ANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAG 1190


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 276/937 (29%), Positives = 469/937 (50%), Gaps = 80/937 (8%)

Query: 5   KLFHLQILKHGFAYDV-FLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY-T 62
           K+ H Q++K    ++       LI+ Y+  GD  SA+ +F     RN + W   V  + +
Sbjct: 50  KMMHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKS 109

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G  +   ++FKE+   G + +       L+ C          GM++H  ++K     D
Sbjct: 110 SAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRV--MDIWLGMEIHGCLIKRGFDLD 167

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             +   L+  YG C    + A ++F E+   + + WN  I +  Q        +LF +MQ
Sbjct: 168 VYLRCALMNFYGRCW-GLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQ 226

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
              F + LK    T   ++ A     +      +QI   V + GL SD+ + + L+S ++
Sbjct: 227 ---FSF-LKAETATIVRVLQAC--GKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYS 280

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
           + G    AR++F+ M  +N  S                              N +++ YA
Sbjct: 281 KNGKLELARRVFDSMENRNTSSW-----------------------------NSMISSYA 311

Query: 303 KCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
             G ++D+ S+F  +    +  D V+WN ++SG   +G  EE +     M+ +G   ++ 
Sbjct: 312 ALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSS 371

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           S+ S L + + LG++ +G++ HG  L+ G D DV V  +L+ +Y     L+    VF  M
Sbjct: 372 SMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNM 431

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
              +  +WNS++  ++  + +  +A++    M + G  P+ VT+  +++  + +  GK  
Sbjct: 432 KNRNIFAWNSLVSGYS-FKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEA 490

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
             V  Q     +        AL+S   + G   D  K FA+M                  
Sbjct: 491 LAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQ----------------- 533

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
                          Q G   +  +   +L ACAS++ L++G E+H   +R     DV +
Sbjct: 534 ---------------QEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFV 578

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            +AL+DMYSK   +  A + F  +  + + SWN MI G+A  G G +A+++F++M+  G 
Sbjct: 579 ATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGV 638

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
            PD +TF  +LSAC ++GL+ EG+K+F SM   Y ++P+LE + CMVDLLGRAG LD+  
Sbjct: 639 GPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAW 698

Query: 719 EFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYAS 778
           + I+ MP+ P++ IW  +LG+ CR + +  +    AA  LF++EP N+ NY+L+ N+Y+ 
Sbjct: 699 DLIHTMPLKPDATIWGALLGS-CRIH-KNLKFAETAAKNLFKLEPNNSANYILMMNLYSI 756

Query: 779 GGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQK 838
             +WED+   R+ M  A V+     SW+ +   VHVF + ++ HP+   IY +L +L  +
Sbjct: 757 FNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSE 816

Query: 839 MRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR-NSKLPIRIMKNLRVCGDC 897
           M+  GYVP       +++   K+ ++  H+EK+A+ + L +  +  PIR++KN R+C DC
Sbjct: 817 MKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDC 876

Query: 898 HSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           HSA K+IS +  RE+ LRD  RFHHF +GKCSC D+W
Sbjct: 877 HSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 913



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 224/483 (46%), Gaps = 70/483 (14%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  + + G   DV LCN LI++Y + G L  A ++FD M +RN+ SW  ++S Y  
Sbjct: 253 AKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAA 312

Query: 64  KGMSNEACKMFKE-----------------------------------MVRAGFLLNRYA 88
            G  N+A  +F E                                   M   GF  N  +
Sbjct: 313 LGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSS 372

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE 148
           + SVL+A  E G      G + H  VL++    D  V   LI MY     S   A+ +F+
Sbjct: 373 MTSVLQAISELG--FLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKN-HSLTSAQAVFD 429

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
            ++ R++ +WNS++S YS +G      +L ++M++EG    +KP+  T+  +I+  Y+  
Sbjct: 430 NMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEG----IKPDLVTWNGMIS-GYAMW 484

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV----S 264
             G   L  +L   K  GL  ++   +AL+SG ++ GN   + K F QM Q+ V+    S
Sbjct: 485 GCGKEAL-AVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSAS 543

Query: 265 MNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
           +  L+         +KGKE+H   IR+G  + V V   L++MY+K  ++ ++  VFR + 
Sbjct: 544 ITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQ 603

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            K   SWN MI G    G  +EAI  F  M++ G+     +  + LS+C + G I     
Sbjct: 604 NKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLI----- 658

Query: 379 IHGEGLKL--GLDSDVSVSNAL------LSLYADAGYLSRCLKVFFLMP-EHDQVSWNSV 429
             GEG K    + +D  +   L      + L   AGYL     +   MP + D   W ++
Sbjct: 659 --GEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGAL 716

Query: 430 IGA 432
           +G+
Sbjct: 717 LGS 719



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 113/473 (23%), Positives = 202/473 (42%), Gaps = 17/473 (3%)

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG--LDSDVSVSNALLSLYADAGYL 408
           D   S + ++I++L+S          + +H + +KL    + D +  N L+S Y   G  
Sbjct: 33  DSHSSDDSNVITSLTSV---------KMMHAQMIKLPQKWNPDAAAKN-LISSYLGFGDF 82

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
                VF++    + + WNS +  F  S   +   ++ + ++   G   +   +   L  
Sbjct: 83  WSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKT 142

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
            +      LG ++H  +IK     +  +  AL++ YG+C  ++   ++F  M    + + 
Sbjct: 143 CTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPN-PEALL 201

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           WN  I   + +E L K + L   M     + +  T   VL AC  +  L    ++H    
Sbjct: 202 WNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVF 261

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
           R  L+ DV + + L+ MYSK G+++ A R FD M  RN  SWNSMIS YA  G  + A +
Sbjct: 262 RFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWS 321

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           LF +++     PD VT+  +LS     G  +E     + M Q  G  P     + ++  +
Sbjct: 322 LFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRM-QGEGFKPNSSSMTSVLQAI 380

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
              G L+  +E      +  N       +G        K      A  +   M+ +N   
Sbjct: 381 SELGFLNMGKE--THGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFA 438

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDES 821
           +  L + Y+  G +ED  +    M++  +K +   +W  M  G  ++  G E+
Sbjct: 439 WNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDL-VTWNGMISGYAMWGCGKEA 490


>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Vitis vinifera]
          Length = 590

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/591 (39%), Positives = 351/591 (59%), Gaps = 18/591 (3%)

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
           SSN   +  L  C +L  +   +Q+H   +  GL       + +L L +     +  L +
Sbjct: 7   SSNHPTLQLLEKCKTLDTL---KQVHAHMITTGLIFHTYPLSRIL-LISSTIVFTHALSI 62

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD-MRRAGWSPNGVTFINILAAASSFS 473
           F  +P      +N++I + A+ +     A   Y   +      PNG TF ++  A  S  
Sbjct: 63  FNHIPNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQP 122

Query: 474 MGKLGHQVHAQVIKY-NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
             + G  +H  V+K+     +  ++ ALL+ Y KCG++  C  +F ++S + D  SWNS+
Sbjct: 123 WLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQIS-KPDLASWNSI 181

Query: 533 ISGYIHNE--------LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
           +S Y+HN         L  + + L   M +   + +  T   ++SACA +  L +G   H
Sbjct: 182 LSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAH 241

Query: 585 ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGD 644
              ++  L+ +  +G+AL+DMYSKCG +D A + FD +P R+   +N+MI G+A HG+G 
Sbjct: 242 VYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGH 301

Query: 645 KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCM 704
           +AL LF +M L+G  PD VT V  + +CSH GLV+EG   F+SM +VYG+ P+LE + C+
Sbjct: 302 QALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCL 361

Query: 705 VDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ 764
           VDLLGRAG L + EE +  MP+ PN++IWR++LGA  R +    E+G      L ++EP+
Sbjct: 362 VDLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGA-ARVH-GNLEIGEVVLKHLIQLEPE 419

Query: 765 NAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPE 824
            + NYVLL+NMYAS  +W+DV + RK MK+  + K  G S V +   +H F+ GD++HP 
Sbjct: 420 TSGNYVLLSNMYASINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPR 479

Query: 825 KDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKL- 883
              IY KL+E+++++ + G+ P+T   LFD+E E KED +SYHSE++A+AF L  +    
Sbjct: 480 SKEIYLKLEEMSRRLHEYGHKPRTLEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCA 539

Query: 884 PIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           PIRI+KNLRVCGDCH++ K ISKI  REI++RD NRFHHF +G CSC DYW
Sbjct: 540 PIRIIKNLRVCGDCHTSSKLISKIYEREIIVRDRNRFHHFKEGACSCSDYW 590



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 170/383 (44%), Gaps = 24/383 (6%)

Query: 276 KEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           K+VH ++I +GL F    +   L  + +       + S+F  +       +NT+IS L  
Sbjct: 26  KQVHAHMITTGLIFHTYPLSRIL--LISSTIVFTHALSIFNHIPNPTIFLYNTLISSLAN 83

Query: 335 NGCYEEAIMNFCA--MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSD 391
              +     +  +  +    L  + F+  S   +C S  W+  G+ +H   LK L    D
Sbjct: 84  IKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRHGRALHTHVLKFLEPTCD 143

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI-------GAFADSEALVSEAV 444
             V  ALL+ YA  G +  C  +F  + + D  SWNS++       GA  +  +L  E +
Sbjct: 144 PFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEVL 203

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
             +++M+++    N VT + +++A +       G   H  V+K+N+     +  AL+  Y
Sbjct: 204 TLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMY 263

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            KCG +D   ++F ++   RD + +N+MI G+  +    +A++L   M   G   D  T 
Sbjct: 264 SKCGCLDLACQLFDQLP-HRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTL 322

Query: 565 ATVLSACASVATLERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
              + +C+ V  +E G +V        GV   LE        LVD+  + GR+  A    
Sbjct: 323 VVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEH----YGCLVDLLGRAGRLREAEERV 378

Query: 620 DLMPVR-NVYSWNSMISGYARHG 641
             MP++ N   W S++     HG
Sbjct: 379 LNMPMKPNAVIWRSLLGAARVHG 401



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 141/311 (45%), Gaps = 20/311 (6%)

Query: 249 YARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIR--SGLFDMVAVGNGLVNM 300
           Y+R +    ++ N  +   L +        R G+ +H ++++      D   V   L+N 
Sbjct: 95  YSRVLTHTTLKPNGFTFPSLFKACGSQPWLRHGRALHTHVLKFLEPTCDPF-VQAALLNY 153

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG---CYE-----EAIMNFCAMRRDG 352
           YAKCG +   R +F  +   D  SWN+++S    N    C +     E +  F  M++  
Sbjct: 154 YAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSL 213

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
           + ++  +L++ +S+CA LG +  G   H   LK  L  +  V  AL+ +Y+  G L    
Sbjct: 214 IKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLAC 273

Query: 413 KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
           ++F  +P  D + +N++IG FA       +A+  +  M   G +P+ VT +  + + S  
Sbjct: 274 QLFDQLPHRDTLCYNAMIGGFA-IHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHV 332

Query: 473 SMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
            + + G  V   + + Y V  +      L+   G+ G + + E+    M  + + V W S
Sbjct: 333 GLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRS 392

Query: 532 MI-SGYIHNEL 541
           ++ +  +H  L
Sbjct: 393 LLGAARVHGNL 403



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 159/382 (41%), Gaps = 63/382 (16%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQ-RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
           A  IF  I    +  +N++IS  +  +  T   F L+SR+       +LKPN +TF SL 
Sbjct: 59  ALSIFNHIPNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHT---TLKPNGFTFPSLF 115

Query: 202 TAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
            A  S   +  G  L   +L  ++      D +V +AL++ +A+ G     R +F Q+ +
Sbjct: 116 KACGSQPWLRHGRALHTHVLKFLEPT---CDPFVQAALLNYYAKCGKVGACRYLFNQISK 172

Query: 260 KNVVSMNGLMEGR----------------------------------------------- 272
            ++ S N ++                                                  
Sbjct: 173 PDLASWNSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELG 232

Query: 273 --RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
              +G   H Y+++  L     VG  L++MY+KCG +D +  +F  +  +D++ +N MI 
Sbjct: 233 ALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIG 292

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK--LGL 388
           G   +G   +A+  F  M  +GL   + +L+ T+ SC+ +G +  G  +  E +K   G+
Sbjct: 293 GFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVF-ESMKEVYGV 351

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEAL-VSEAVKY 446
           +  +     L+ L   AG L    +    MP + + V W S++GA      L + E V  
Sbjct: 352 EPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLK 411

Query: 447 YLDMRRAGWSPNGVTFINILAA 468
           +L       S N V   N+ A+
Sbjct: 412 HLIQLEPETSGNYVLLSNMYAS 433



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 132/317 (41%), Gaps = 30/317 (9%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK--------GMSNEA 70
           D F+   L+N Y + G + +   LF+++   +  SW  I+S Y H          +S E 
Sbjct: 143 DPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEV 202

Query: 71  CKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLI 130
             +F EM ++    N   L +++ AC E G      G   H  VLK N   +  V   LI
Sbjct: 203 LTLFIEMQKSLIKANEVTLVALISACAELG--ALSQGAWAHVYVLKHNLKLNHFVGTALI 260

Query: 131 AMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSL 190
            MY  C    D A ++F+++  RD + +N++I  ++  G       LF +M  EG    L
Sbjct: 261 DMYSKC-GCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEG----L 315

Query: 191 KPNEYTFGSLITAAYSS----VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
            P++ T   ++T    S    V  G  + +   +M +  G+   L     LV    R G 
Sbjct: 316 APDDVTL--VVTMCSCSHVGLVEEGCDVFE---SMKEVYGVEPKLEHYGCLVDLLGRAGR 370

Query: 247 FYYA-RKIFEQMIQKNVVSMNGLM-EGRRKGKEVHGYLIRSGLFDMVAVGNG----LVNM 300
              A  ++    ++ N V    L+   R  G    G ++   L  +    +G    L NM
Sbjct: 371 LREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNM 430

Query: 301 YAKCGTIDDSRSVFRFM 317
           YA     DD + V + M
Sbjct: 431 YASINRWDDVKRVRKLM 447



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 50/93 (53%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H+ +LKH    + F+   LI++Y + G L  A +LFD++P R+++ +  ++ G+   G  
Sbjct: 241 HVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYG 300

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           ++A  +FK+M   G   +   L   + +C   G
Sbjct: 301 HQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVG 333


>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/605 (37%), Positives = 364/605 (60%), Gaps = 14/605 (2%)

Query: 335 NGCYEE----AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           N CY      A+    +M R G+ + + +    +  C + G +  G+++H      G   
Sbjct: 259 NHCYRRDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHP 318

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
              ++N L+++Y     L     +F  MPE + VSW ++I A+++++ L   A++    M
Sbjct: 319 KTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQ-LNDRAMRLLAFM 377

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
            R G  PN  TF ++L A       K   Q+H+ ++K  + ++  + +AL+  Y K GE+
Sbjct: 378 FRDGVMPNMFTFSSVLRACERLYDLK---QLHSWIMKVGLESDVFVRSALIDVYSKMGEL 434

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
            +  K+F  M    D V WNS+I+ +  +    +A++L   M + G   D  T  +VL A
Sbjct: 435 LEALKVFREMMTG-DSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRA 493

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
           C S++ LE G + H   ++   + D+++ +AL+DMY KCG ++ A   F+ M  ++V SW
Sbjct: 494 CTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISW 551

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           ++MI+G A++G   +AL LF  MK+ GP P+H+T +GVL ACSHAGLV+EG+ +F+SM+ 
Sbjct: 552 STMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNN 611

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
           +YG+ P  E + CM+DLLGRA +LD + + I++M   P+ + WRT+L A CRA  +  +L
Sbjct: 612 LYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDA-CRAR-QNVDL 669

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
              AA  + +++PQ+   YVLL+N+YA   +W DVA+ R+ MK+  ++KE GCSW+ +  
Sbjct: 670 ATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNK 729

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
            +H F+ GD+SHP+ D I  +L +   ++  AGYVP T F L DLE E +ED + YHSEK
Sbjct: 730 QIHAFILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEK 789

Query: 871 IAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +A+ F +++   +  IRI KNL++CGDCH   K I+++  R IV+RD  R+HHF DG CS
Sbjct: 790 LAIVFGIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCS 849

Query: 930 CGDYW 934
           CGDYW
Sbjct: 850 CGDYW 854



 Score =  187 bits (475), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/308 (35%), Positives = 172/308 (55%), Gaps = 7/308 (2%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R+GK VH ++  +G      + N L+NMY K   +++++ +F  M  ++ VSW TMIS  
Sbjct: 302 REGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAY 361

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
                 + A+     M RDG+M + F+  S L +C  L  +   +Q+H   +K+GL+SDV
Sbjct: 362 SNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDL---KQLHSWIMKVGLESDV 418

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V +AL+ +Y+  G L   LKVF  M   D V WNS+I AFA   +   EA+  Y  MRR
Sbjct: 419 FVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFA-QHSDGDEALHLYKSMRR 477

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G+  +  T  ++L A +S S+ +LG Q H  V+K++   +  + NALL  Y KCG ++D
Sbjct: 478 VGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLKFD--QDLILNNALLDMYCKCGSLED 535

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
            + IF RM+ ++D +SW++MI+G   N    +A+NL   M  +G + +H T   VL AC+
Sbjct: 536 AKFIFNRMA-KKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACS 594

Query: 573 SVATLERG 580
               +  G
Sbjct: 595 HAGLVNEG 602



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 140/270 (51%), Gaps = 14/270 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ K  H  I  +G+    FL N LIN+YV+   L  A  LFD+MP+RN VSW  ++S Y
Sbjct: 302 REGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAY 361

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           ++  +++ A ++   M R G + N +   SVLRAC+           Q+H  ++K     
Sbjct: 362 SNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLK-----QLHSWIMKVGLES 416

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V + LI +Y    E  + A ++F E+ T D + WNSII+ ++Q  D      L+  M
Sbjct: 417 DVFVRSALIDVYSKMGELLE-ALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSM 475

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           +R GF      ++ T  S++ A  S  LS   L +Q  A V       DL + +AL+  +
Sbjct: 476 RRVGF----PADQSTLTSVLRACTS--LSLLELGRQ--AHVHVLKFDQDLILNNALLDMY 527

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
            + G+   A+ IF +M +K+V+S + ++ G
Sbjct: 528 CKCGSLEDAKFIFNRMAKKDVISWSTMIAG 557



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 184/409 (44%), Gaps = 52/409 (12%)

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKA 225
           R D  S   +   M+R G    +  +  T+  LI    A+ +V  G  + + I +     
Sbjct: 263 RRDLPSAMHVLDSMERRG----VWADSITYSELIKCCLAHGAVREGKRVHRHIFS----N 314

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------- 272
           G     ++ + L++ + +      A+ +F++M ++NVVS   ++                
Sbjct: 315 GYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLL 374

Query: 273 ----RKG---------------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
               R G                     K++H ++++ GL   V V + L+++Y+K G +
Sbjct: 375 AFMFRDGVMPNMFTFSSVLRACERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGEL 434

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
            ++  VFR M+  DSV WN++I+   Q+   +EA+  + +MRR G  +   +L S L +C
Sbjct: 435 LEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRAC 494

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
            SL  + LG+Q H   LK   D D+ ++NALL +Y   G L     +F  M + D +SW+
Sbjct: 495 TSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWS 552

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVI 486
           ++I   A +     EA+  +  M+  G  PN +T + +L A S   +   G +   +   
Sbjct: 553 TMIAGLAQN-GFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNN 611

Query: 487 KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
            Y +         +L   G+  ++DD  K+   M+   D V+W +++  
Sbjct: 612 LYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDA 660



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 117/212 (55%), Gaps = 10/212 (4%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D K  H  I+K G   DVF+ + LI+VY ++G+L  A K+F EM   +SV W  I++ + 
Sbjct: 401 DLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFA 460

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                +EA  ++K M R GF  ++  L SVLRAC     S  + G Q H  VLK +Q  D
Sbjct: 461 QHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSL--SLLELGRQAHVHVLKFDQ--D 516

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            +++N L+ MY  C  S + A+ IF  +  +D+ISW+++I+  +Q G ++    LF  M+
Sbjct: 517 LILNNALLDMYCKC-GSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMK 575

Query: 183 REGFRYSLKPNEYT-FGSLITAAYSSVLSGSY 213
            +G     KPN  T  G L   +++ +++  +
Sbjct: 576 VQG----PKPNHITILGVLFACSHAGLVNEGW 603


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 276/832 (33%), Positives = 433/832 (52%), Gaps = 64/832 (7%)

Query: 155 LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL 214
           L  WN +++  S+ G       +  R+        + P+ +T    + +       G   
Sbjct: 30  LPQWNGLLADLSRAGRHADALAILPRLL--AASDGVAPDRFTLPPALKSCRGD--DG--- 82

Query: 215 LQQILAMVKKAGLLS-DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM---- 269
            +Q+ A+  K GL   D +VG++LVS + R G    A K+FE M  +N+VS N LM    
Sbjct: 83  -RQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVA 141

Query: 270 EGRR-------------------------------------KGKEVHGYLIRSGLFDMVA 292
           + RR                                      G+ VHG  ++SG      
Sbjct: 142 DPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPR 201

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFM---IGKDSVSWNTMISGLDQNGCYEEA--IMNFCA 347
           V N LV+MYAKCG + D+   F       G++ VSWN M+ G  +NG    A  ++    
Sbjct: 202 VSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQ 261

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD-SDVSVSNALLSLYADAG 406
           M   G+ +   +++S L  C+ L  +   +++H   ++ GL  +   V NAL++ Y   G
Sbjct: 262 MEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCG 321

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA-GWSPNGVTFINI 465
            L    +VF  +      SWN++IGA A +    S A++ + +M  A G  P+  +  ++
Sbjct: 322 CLLHACRVFDGICSKMVSSWNALIGAHAQN-GEASAAIELFREMTNACGQKPDWFSIGSL 380

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           L A  +      G   H  +++  +  ++ I  +LLS Y +CG  +   ++     E +D
Sbjct: 381 LLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGR-ESLARVLFDAVEEKD 439

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQR--GQRLDHFTFATVLSACASVATLERGMEV 583
           EVSWN+MI+GY  N L  +++ L   M  +  G         + L AC+ +  +  G E+
Sbjct: 440 EVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEM 499

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           H   ++A L  D  + S+++DMYSKCG +D A  FFD +  ++  SW  MI+GYA +G G
Sbjct: 500 HCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRG 559

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC 703
            +A+ L+ +M  +G  PD  T++G+L AC HAG++++G   F+ M  +  +  +LE ++C
Sbjct: 560 KEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYAC 619

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP 763
           ++ +L RAG        +  MP  P++ I  +VL AC      + ELG+K A+ L E+EP
Sbjct: 620 VIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHG--EVELGKKVADKLLELEP 677

Query: 764 QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHP 823
             A +YVL +NMYA   +W+++ K RK +++A V KE GCSW+ +   V+ FVAG+ S P
Sbjct: 678 HKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENSLP 737

Query: 824 EKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNS-K 882
           E   + +    L +K+R AGY P T   L +LE E K + + +HSEK A+AF L R +  
Sbjct: 738 EMHKVRKMWYSLEEKIRAAGYAPDTTVMLHELEEEEKVEALRWHSEKQAIAFGLLRTAGP 797

Query: 883 LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             +R+ KN+R+C DCH+A K ISK+  REIV+RD  RFHHF DG CSCGDYW
Sbjct: 798 TKVRVFKNIRMCKDCHNAAKLISKVADREIVVRDKKRFHHFRDGLCSCGDYW 849



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 157/590 (26%), Positives = 260/590 (44%), Gaps = 59/590 (10%)

Query: 3   DAKLFHLQILKHGFA-YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           D +  H    K G A  D F+ N+L+++Y R G +  A K+F+ M  RN VSW  +++  
Sbjct: 81  DGRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAV 140

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                  E  +   E +      +   L +VL  C     +  + G  VH L +KS    
Sbjct: 141 ADPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAAL--AWPETGRAVHGLAVKSGWDA 198

Query: 122 DGLVSNVLIAMYGSCLESTD--CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
              VSNVL+ MY  C E  D  CA         R+++SWN ++  Y++ G+  + F L  
Sbjct: 199 APRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLR 258

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL-LSDLYVGSALV 238
            MQ E     +  +E T  S++     S L     L+++ A V + GL L+   V +AL+
Sbjct: 259 EMQME--ERGVPADEITMLSVLPVC--SGLPELAKLRELHAFVVRRGLHLTGDMVPNALI 314

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------ 274
           + + R G   +A ++F+ +  K V S N L+    +                        
Sbjct: 315 AAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDW 374

Query: 275 ------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                             GK  HG+++R+GL     +   L+++Y +CG    +R +F  
Sbjct: 375 FSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDA 434

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM--RRDGLMSSNFSLISTLSSCASLGWIM 374
           +  KD VSWNTMI+G  QNG   E++  F  M  ++ G   S  +  S L +C+ L  + 
Sbjct: 435 VEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVR 494

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
           LG+++H   LK  L  D  +S++++ +Y+  G +      F  +   D VSW  +I  +A
Sbjct: 495 LGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYA 554

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANET 494
                  EAV  Y  M R G  P+G T++ +L A     M + G     Q ++     E 
Sbjct: 555 -VNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDG-LCFFQEMRNLPKIEA 612

Query: 495 TIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
            +E+   ++    + G   D   +   M E  D    +S++S  ++H E+
Sbjct: 613 KLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEV 662



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 174/376 (46%), Gaps = 24/376 (6%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRA-GF 82
           N LI  Y R G L  A ++FD +  +   SW  ++  +   G ++ A ++F+EM  A G 
Sbjct: 311 NALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQ 370

Query: 83  LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC 142
             + +++GS+L AC          G   H  +L++    D  +   L+++Y  C   +  
Sbjct: 371 KPDWFSIGSLLLACGNL--KHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRES-L 427

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ-REGFRYSLKPNEYTFGSLI 201
           AR +F+ +E +D +SWN++I+ YSQ G      +LF  MQ ++G  +   P+     S +
Sbjct: 428 ARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHW---PSLLAATSAL 484

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
            A   S L    L +++     KA L  D ++ S+++  +++ G+   AR  F+++  K+
Sbjct: 485 VAC--SELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKD 542

Query: 262 VVSMNGLMEG---RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC---GTIDDSRSVFR 315
            VS   ++ G     +GKE  G   + G   M   G   + +   C   G ++D    F+
Sbjct: 543 AVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQ 602

Query: 316 FMIGKDSVS-----WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
            M     +      +  +I  L + G + +A+     M  +        L S LS+C   
Sbjct: 603 EMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEE---PDAKILSSVLSACHMH 659

Query: 371 GWIMLGQQIHGEGLKL 386
           G + LG+++  + L+L
Sbjct: 660 GEVELGKKVADKLLEL 675


>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 758

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 243/671 (36%), Positives = 387/671 (57%), Gaps = 20/671 (2%)

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VHG+++++G  D   V + LVN+YAKCG ++D+R VF  M+ ++ V+W T++ G  QN  
Sbjct: 89  VHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQ 148

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
            + AI  F  M   G   S ++L + L +C+SL  + LG Q H   +K  +D D SV +A
Sbjct: 149 PKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSA 208

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L SLY+  G L   LK F  + E + +SW S + A AD+ A V + ++ +++M      P
Sbjct: 209 LCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPV-KGLRLFVEMIAVDIKP 267

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           N  T  + L+        +LG QV++  IK+   +   + N+LL  Y K G + +  ++F
Sbjct: 268 NEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLF 327

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPK-----------AMNLVWFMMQRGQRLDHFTFAT 566
            RM +    V+WN+MI+G+     L K           A+ L   +   G + D FT ++
Sbjct: 328 NRMDDA-SMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSS 386

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           VLS C+ +  +E+G ++HA  ++     DV++ ++L+ MYSKCG I+ AS+ F  M  R 
Sbjct: 387 VLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRT 446

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
           + +W SMI+G+++HG   +AL +F  M L G  P+ VTFVGVLSACSHAG+V +   +F+
Sbjct: 447 MIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFE 506

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
            M + Y + P ++ + CMVD+  R G L++   FI KM   P+  IW   +  C   +  
Sbjct: 507 IMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGC--KSHG 564

Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
             ELG  AA  L  ++P++   YVLL NMY S  ++EDV++ RK M+E +V K    SW+
Sbjct: 565 NLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWI 624

Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGY--VPQTKFALFDLEPESKEDLV 864
           ++KD V+ F    ++HP+  LI + L++L  K+++ GY  +   + +  + E E      
Sbjct: 625 SIKDKVYSFKTNGKTHPQSSLICKSLEDLLAKVKNVGYEMLESVEISDEEEEEEKTSSPN 684

Query: 865 SYHSEKIAVAFVLTR--NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHH 922
            YHSEK+A+ F L    NS  PIR++K+  +C D H+  K++S + GREI+++DS R H 
Sbjct: 685 IYHSEKLAITFGLENLPNSS-PIRVVKSTLICRDSHNFIKYVSTLAGREIIVKDSKRLHK 743

Query: 923 FNDGKCSCGDY 933
           F +G+CSCG++
Sbjct: 744 FANGECSCGNF 754



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 228/490 (46%), Gaps = 65/490 (13%)

Query: 212 SYLLQQIL-AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
           SY   QI+   V K G   + +V S LV+ +A+ GN   AR++F+ M+++NVV+   LM 
Sbjct: 82  SYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMV 141

Query: 271 G-----------------------------------------RRKGKEVHGYLIRSGLFD 289
           G                                          + G + H Y+I+  +  
Sbjct: 142 GFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDF 201

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
             +VG+ L ++Y+KCG ++D+   F  +  K+ +SW + +S    NG   + +  F  M 
Sbjct: 202 DASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMI 261

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
              +  + F+L S LS C  +  + LG Q++   +K G +S++ V N+LL LY  +G + 
Sbjct: 262 AVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIV 321

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALV----------SEAVKYYLDMRRAGWSPNG 459
              ++F  M +   V+WN++I   A    L           SEA+K +  +  +G  P+ 
Sbjct: 322 EAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDL 381

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
            T  ++L+  S     + G Q+HAQ IK    ++  +  +L+S Y KCG ++   K F  
Sbjct: 382 FTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLE 441

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           MS  R  ++W SMI+G+  + +  +A+++   M   G R +  TF  VLSAC+       
Sbjct: 442 MST-RTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHA----- 495

Query: 580 GMEVHACGVRACLEFDVVIGSA------LVDMYSKCGRIDYASRFFDLMPVR-NVYSWNS 632
           GM   A      ++    I  A      +VDM+ + GR++ A  F   M    + + W++
Sbjct: 496 GMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSN 555

Query: 633 MISGYARHGH 642
            I+G   HG+
Sbjct: 556 FIAGCKSHGN 565



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 193/423 (45%), Gaps = 61/423 (14%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + ++ H  ++K G   + F+ + L+NVY + G++  A ++FD M  RN V+W  ++ G+ 
Sbjct: 85  ETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFV 144

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                  A  +F+EM+ AG   + Y L +VL AC        K G Q H  ++K +  FD
Sbjct: 145 QNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSL--QSLKLGDQFHAYIIKYHVDFD 202

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V + L ++Y  C    D A + F  I  +++ISW S +S  +  G  +   +LF  M 
Sbjct: 203 ASVGSALCSLYSKCGRLED-ALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEM- 260

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
                  +KPNE+T  S ++     +LS   L  Q+ ++  K G  S+L V ++L+  + 
Sbjct: 261 ---IAVDIKPNEFTLTSALSQC-CEILSLE-LGTQVYSLCIKFGYESNLRVRNSLLYLYL 315

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------------ 272
           + G    A ++F +M   ++V+ N ++ G                               
Sbjct: 316 KSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLS 375

Query: 273 ----------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDS 310
                                  +G+++H   I++G    V V   L++MY+KCG+I+ +
Sbjct: 376 GMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERA 435

Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
              F  M  +  ++W +MI+G  Q+G  ++A+  F  M   G+  +  + +  LS+C+  
Sbjct: 436 SKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHA 495

Query: 371 GWI 373
           G +
Sbjct: 496 GMV 498



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 189/372 (50%), Gaps = 15/372 (4%)

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           Q +HG  +K G   +  V + L+++YA  G +    +VF  M   + V+W +++  F  +
Sbjct: 87  QIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQN 146

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
                 A+  + +M  AG  P+  T   +L A SS    KLG Q HA +IKY+V  + ++
Sbjct: 147 SQ-PKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASV 205

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
            +AL S Y KCG ++D  K F+R+ E ++ +SW S +S    N    K + L   M+   
Sbjct: 206 GSALCSLYSKCGRLEDALKTFSRIRE-KNVISWTSAVSACADNGAPVKGLRLFVEMIAVD 264

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
            + + FT  + LS C  + +LE G +V++  ++   E ++ + ++L+ +Y K G I  A 
Sbjct: 265 IKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAH 324

Query: 617 RFFDLMPVRNVYSWNSMISGYARH-----------GHGDKALTLFSQMKLDGPLPDHVTF 665
           R F+ M   ++ +WN+MI+G+A+              G +AL LFS++ L G  PD  T 
Sbjct: 325 RLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTL 384

Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
             VLS CS    +++G +   + +   G +  +   + ++ +  + G +++  +   +M 
Sbjct: 385 SSVLSVCSRMLAIEQG-EQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMS 443

Query: 726 ITPNSLIWRTVL 737
            T   + W +++
Sbjct: 444 -TRTMIAWTSMI 454



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 195/439 (44%), Gaps = 41/439 (9%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           FH  I+K+   +D  + + L ++Y + G L  A K F  + ++N +SW   VS     G 
Sbjct: 190 FHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGA 249

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             +  ++F EM+      N + L S L  C  C     + G QV+ L +K     +  V 
Sbjct: 250 PVKGLRLFVEMIAVDIKPNEFTLTSALSQC--CEILSLELGTQVYSLCIKFGYESNLRVR 307

Query: 127 NVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQ----RGDTISV----- 174
           N L+ +Y   G  +E    A R+F  ++   +++WN++I+ ++Q      D +S      
Sbjct: 308 NSLLYLYLKSGCIVE----AHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGS 363

Query: 175 --FKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLY 232
              KLFS++   G    +KP+ +T  S+++    S +      +QI A   K G LSD+ 
Sbjct: 364 EALKLFSKLNLSG----MKPDLFTLSSVLSVC--SRMLAIEQGEQIHAQTIKTGFLSDVI 417

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSG 286
           V ++L+S +++ G+   A K F +M  + +++   ++ G       ++   +   +  +G
Sbjct: 418 VSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAG 477

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEA 341
           +        G+++  +  G +  + + F  M  K  +      +  M+    + G  E+A
Sbjct: 478 VRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQA 537

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
            +NF  +++     S F   + ++ C S G + LG     + L L    D      LL++
Sbjct: 538 -LNF--IKKMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLSLK-PKDPETYVLLLNM 593

Query: 402 YADAGYLSRCLKVFFLMPE 420
           Y  A       +V  +M E
Sbjct: 594 YLSAERFEDVSRVRKMMEE 612



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 2/177 (1%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +  +L  C    +      VH   ++     +  + S LV++Y+KCG ++ A R FD M 
Sbjct: 70  YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            RNV +W +++ G+ ++     A+ +F +M   G  P   T   VL ACS    +  G  
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLG-D 188

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC 740
            F +    Y +       S +  L  + G L+   +  +++    N + W + + AC
Sbjct: 189 QFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIR-EKNVISWTSAVSAC 244


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 263/803 (32%), Positives = 426/803 (53%), Gaps = 56/803 (6%)

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSN-QTFDGLVSNVLIAMYGSCLESTDCARRIF 147
           L +VLR C    PS    G+QVH   + +     D  +   L+ MY       D A  +F
Sbjct: 42  LLAVLRGC--VSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRD-AVAVF 98

Query: 148 EEIE---TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA 204
             +        + WN +I   +  GD  S    + +M       +  P+ +TF  ++ + 
Sbjct: 99  SSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMW--AHPSAPLPDSHTFPYVVKSC 156

Query: 205 YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS 264
             + L    L + +    +  GL  D++VGSAL+  +A  G  + AR++F+ M +++ V 
Sbjct: 157 --AALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVL 214

Query: 265 MNGLMEGRRK-----------------------------------------GKEVHGYLI 283
            N +M+G  K                                         G ++H   +
Sbjct: 215 WNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAV 274

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
           + GL   VAV N LV+MYAKC  +DD   +F  M   D V+WN MISG  QNG  ++A++
Sbjct: 275 KYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALL 334

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            FC M++ G+   + +L+S L +   L     G+++HG  ++  +  DV + +AL+ +Y 
Sbjct: 335 LFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYF 394

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
               +     V+      D V  +++I  +     +  EAVK +  +   G  PN V   
Sbjct: 395 KCRAVRMAQSVYDSSKAIDVVIGSTMISGYV-LNGMSQEAVKMFRYLLEQGIRPNAVAIA 453

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           ++L A +S +  KLG ++H+  +K        +E+AL+  Y KCG +D    IF+++S +
Sbjct: 454 SVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAK 513

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
            DEV+WNSMIS +  N    +A+NL   M   G +  + T ++VLSACAS+  +  G E+
Sbjct: 514 -DEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEI 572

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           H   ++  +  D+   SAL+DMY KCG +++A R F+ MP +N  SWNS+I+ Y  +G  
Sbjct: 573 HGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLV 632

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC 703
            ++++L   M+ +G   DHVTF+ ++SAC+HAG V EG + F+ M++ Y + P++E F+C
Sbjct: 633 KESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFAC 692

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP 763
           MVDL  RAG+LDK  E I  MP  P++ IW  +L A CR + R  EL   A+  LF+++P
Sbjct: 693 MVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHA-CRVH-RNVELAEIASQELFKLDP 750

Query: 764 QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHP 823
            N+  YVL++N+ A  G+W+ V+K R+ MK+ +V+K  G SWV + +  H+FVA D+SHP
Sbjct: 751 HNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHP 810

Query: 824 EKDLIYEKLKELNQKMRDAGYVP 846
           + + IY  LK +  ++R+ GY+P
Sbjct: 811 DSEDIYMSLKSILLELREEGYIP 833



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 166/571 (29%), Positives = 276/571 (48%), Gaps = 52/571 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +L H      G   D+F+ + LI +Y   G L  A ++FD M +R+ V W  ++ GY   
Sbjct: 166 RLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKA 225

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G  + A ++F +M  +G   N   L   L        S   FG+Q+H L +K     +  
Sbjct: 226 GSVSSAVELFGDMRASGCEPNFATLACFLSV--SATESDLFFGVQLHTLAVKYGLESEVA 283

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V+N L++MY  C +  D   ++F  +   DL++WN +IS   Q G       LF  MQ+ 
Sbjct: 284 VANTLVSMYAKC-KCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKS 342

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSG--------SYLLQQILAM-VKKAGLLSDLY--- 232
           G R    P+  T  SL+ A   + L+G         Y+++  + M V     L D+Y   
Sbjct: 343 GIR----PDSVTLVSLLPAL--TDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKC 396

Query: 233 -------------------VGSALVSGFARLGNFYYARKIF----EQMIQKNVVSMNGL- 268
                              +GS ++SG+   G    A K+F    EQ I+ N V++  + 
Sbjct: 397 RAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVL 456

Query: 269 -----MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                M   + G+E+H Y +++       V + L++MYAKCG +D S  +F  +  KD V
Sbjct: 457 PACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEV 516

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           +WN+MIS   QNG  EEA+  F  M  +G+  SN ++ S LS+CASL  I  G++IHG  
Sbjct: 517 TWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVV 576

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           +K  + +D+   +AL+ +Y   G L    +VF  MPE ++VSWNS+I ++  +  LV E+
Sbjct: 577 IKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYG-AYGLVKES 635

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV-HAQVIKYNVANETTIENALLS 502
           V     M+  G+  + VTF+ +++A +     + G ++      +Y +A        ++ 
Sbjct: 636 VSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVD 695

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            Y + G++D   ++   M  + D   W +++
Sbjct: 696 LYSRAGKLDKAMELIVDMPFKPDAGIWGALL 726


>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 660

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/661 (36%), Positives = 377/661 (57%), Gaps = 40/661 (6%)

Query: 276 KEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           K++HG ++         +VG  L+ +YA CG    +R +F  +  K+ V +N MI     
Sbjct: 38  KKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVN 97

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N  Y++A++ +  M   G +   ++    L + +    + +G QIHG  LK+GLD ++ V
Sbjct: 98  NHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYV 157

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            N L+++Y     L    +V   +P  D VSWNS++  +A +    ++A++   +M    
Sbjct: 158 GNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQN-GRFNDALELCREMEALN 216

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             PN  T  ++L A ++                      TT +N L             +
Sbjct: 217 LKPNDCTMASLLPAVTN----------------------TTSDNVLY-----------VK 243

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           ++F +++ ++  +SWN MI+ Y++N +  +A+ L   M   G   D  +  +VL A   +
Sbjct: 244 EMFLKLT-KKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDL 302

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
           + L  G  VH    R  L  ++++ +AL+DMY+KCG +  A   F+ M  R+V SW S+I
Sbjct: 303 SALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSII 362

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
           S Y + G G  A+ +F++M+  G  PD + FV VL+ACSHAGL+D+G  +F  M++  G+
Sbjct: 363 SAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAEC-GI 421

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
            P+LE F+C+VDLLGRAG++D+   FI +MP+ P+  +W  +L AC   +     +G  A
Sbjct: 422 TPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYS--NMNIGILA 479

Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
           A+ L  + P+++  YVLL+N+YA  G+W DVA  R  M+   +KK  G S V + DGVH 
Sbjct: 480 ADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHT 539

Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVA 874
           F+AGD SHP+   IYE+L  L  KM++ GY+P+T  AL D+E E KE  ++ HSEK+AVA
Sbjct: 540 FLAGDHSHPQSKKIYEELDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVA 599

Query: 875 F-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
           F ++      PIR+ KNLRVCGDCH A K ISKI  REI++RD++RFHHF +G CSCGDY
Sbjct: 600 FAIINTKPGTPIRVTKNLRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDY 659

Query: 934 W 934
           W
Sbjct: 660 W 660



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 202/414 (48%), Gaps = 14/414 (3%)

Query: 26  LINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLN 85
           L+ VY   G+   A  +FDE+ D+N V +  ++  Y +  +  +A  ++K M   GF+ +
Sbjct: 60  LMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPD 119

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
            Y    VL+A           G+Q+H  VLK     +  V N LIAMYG C +S   A++
Sbjct: 120 MYTYPCVLKASSRS--DSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKC-KSLKEAQQ 176

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           + +EI  RD++SWNS++SVY+Q G      +L   M+      +LKPN+ T  SL+ A  
Sbjct: 177 VLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEA----LNLKPNDCTMASLLPAVT 232

Query: 206 SSVLSGS-YLLQQILAMVKKA----GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ- 259
           ++      Y+ +  L + KK+     ++  +YV +++      L +   A  +   ++  
Sbjct: 233 NTTSDNVLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSI 292

Query: 260 KNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
            +V+   G +     G+ VH +  R  L   + + N L++MYAKCG + D+R+VF  M  
Sbjct: 293 VSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQF 352

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           +D VSW ++IS   + G   +A+  F  MR  GL   + + +S L++C+  G +  G+  
Sbjct: 353 RDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYY 412

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                + G+   +     ++ L   AG +         MP E D+  W  ++ A
Sbjct: 413 FNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSA 466



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 11/155 (7%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           ++ L N LI++Y + G L  A  +F++M  R+ VSW  I+S Y   G   +A  +F EM 
Sbjct: 323 NLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMR 382

Query: 79  RAGFLLNRYALGSVLRACQECG---PSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS 135
            +G   +  A  SVL AC   G      + F +   C +    + F  +V   L+   G 
Sbjct: 383 NSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVD--LLGRAGK 440

Query: 136 CLESTDCARRIFEEIETRDLISWNSIIS---VYSQ 167
             E+    R++  E + R    W  ++S   VYS 
Sbjct: 441 IDEAYGFIRQMPLEPDER---VWGPLLSACRVYSN 472


>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
 gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
          Length = 635

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/574 (38%), Positives = 358/574 (62%), Gaps = 6/574 (1%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S +++CA    +   + IH    +  L  D  + N+L+ +Y   G +S    VF  +P  
Sbjct: 67  SIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTR 126

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D VSW  +I  +A ++ + +EA+    DM RA + P+G TF + L AA +     +G Q+
Sbjct: 127 DVVSWTYLITGYAQND-MPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQM 185

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           HA  +KYN+  +  + +ALL  Y +C +MD   ++F  + + ++EVSWN++I+G+     
Sbjct: 186 HALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWL-DSKNEVSWNALIAGFARKGD 244

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
               +     M + G    HFT+++V SA A +  LE+G  VHA  +++  +    + + 
Sbjct: 245 GETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANT 304

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           ++ MY+K G +  A + FD +  R++ +WN+M++ +A++G G +A+  F +++  G   +
Sbjct: 305 ILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLN 364

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            +TF+ VL+ACSH GLV EG ++F  M   Y + P+++ +   VDLLGRAG L +   F+
Sbjct: 365 QITFLSVLTACSHGGLVKEGKQYFDMMKD-YNVEPEIDHYVSFVDLLGRAGLLKEALIFV 423

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
            KMP+ P + +W  +LGAC R + +  ++G+ AA+ +FE++P++    VLL N+YAS G+
Sbjct: 424 FKMPMEPTAAVWGALLGAC-RMH-KNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQ 481

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           W+D A+ RK MK   VKKE  CSWV +++ VH+FVA D +HP+ + IY   +E+N +++ 
Sbjct: 482 WDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKK 541

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR-NSKLPIRIMKNLRVCGDCHSA 900
           AGYVP T + L  ++ + +E  + YHSEKIA+AF L    +   IRIMKN+R+CGDCHSA
Sbjct: 542 AGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSA 601

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           F+++S++  REIV+RD+NRFHHF++G CSCGDYW
Sbjct: 602 FRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 203/433 (46%), Gaps = 76/433 (17%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H  + +   A D FL N+LI++Y + G ++ A  +FD +P R+ VSW  +++GY  
Sbjct: 81  ARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQ 140

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
             M  EA  +  +M+RA F  + +   S L+A   CG  G   G Q+H L +K N   D 
Sbjct: 141 NDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRG--IGEQMHALAVKYNLDEDV 198

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V + L+ MY  C +  D A R+F+ +++++ +SWN++I+ ++++GD  +    F+ MQR
Sbjct: 199 YVGSALLDMYARC-QQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQR 257

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVGSALVSG 240
            GF        +T+ S+ +A     L+    L+Q   + A + K+G     +V + ++  
Sbjct: 258 NGF----GATHFTYSSVFSA-----LARIGALEQGRWVHAHMIKSGQKLTAFVANTILGM 308

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
           +A+ G+   ARK+F+++ Q+++V+ N ++                               
Sbjct: 309 YAKSGSMVDARKVFDRVDQRDLVTWNTMLTA----------------------------- 339

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           +A+ G            +GK++V+                   +F  +R+ G+  +  + 
Sbjct: 340 FAQYG------------LGKEAVA-------------------HFEEIRKYGIQLNQITF 368

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP- 419
           +S L++C+  G +  G+Q         ++ ++    + + L   AG L   L   F MP 
Sbjct: 369 LSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPM 428

Query: 420 EHDQVSWNSVIGA 432
           E     W +++GA
Sbjct: 429 EPTAAVWGALLGA 441



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 183/386 (47%), Gaps = 46/386 (11%)

Query: 190 LKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
           L P    + S+ITA A S  L+G+  +   L+  + AG   D ++ ++L+  + + G   
Sbjct: 58  LAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAG---DGFLLNSLIHMYCKCGAVS 114

Query: 249 YARKIFEQMIQKNVVSMNGLMEG------------------------------------- 271
            AR +F+ +  ++VVS   L+ G                                     
Sbjct: 115 DARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAG 174

Query: 272 ----RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
               R  G+++H   ++  L + V VG+ L++MYA+C  +D +  VF ++  K+ VSWN 
Sbjct: 175 ACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNA 234

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           +I+G  + G  E  +M F  M+R+G  +++F+  S  S+ A +G +  G+ +H   +K G
Sbjct: 235 LIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSG 294

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
                 V+N +L +YA +G +    KVF  + + D V+WN+++ AFA    L  EAV ++
Sbjct: 295 QKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQY-GLGKEAVAHF 353

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
            ++R+ G   N +TF+++L A S   + K G Q    +  YNV  E     + +   G+ 
Sbjct: 354 EEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRA 413

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMI 533
           G + +      +M        W +++
Sbjct: 414 GLLKEALIFVFKMPMEPTAAVWGALL 439



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 142/316 (44%), Gaps = 15/316 (4%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   +K+    DV++ + L+++Y R   +  A ++FD +  +N VSW  +++G+  KG  
Sbjct: 186 HALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDG 245

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
                 F EM R GF    +   SV  A    G    + G  VH  ++KS Q     V+N
Sbjct: 246 ETTLMKFAEMQRNGFGATHFTYSSVFSALARIG--ALEQGRWVHAHMIKSGQKLTAFVAN 303

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            ++ MY       D AR++F+ ++ RDL++WN++++ ++Q G        F  ++    +
Sbjct: 304 TILGMYAKSGSMVD-ARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIR----K 358

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           Y ++ N+ TF S++TA     L      +Q   M+K   +  ++    + V    R G  
Sbjct: 359 YGIQLNQITFLSVLTACSHGGLVKEG--KQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLL 416

Query: 248 YYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMY 301
             A     +M  +   ++ G + G  R       G      +F++     G    L N+Y
Sbjct: 417 KEALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIY 476

Query: 302 AKCGTIDDSRSVFRFM 317
           A  G  DD+  V + M
Sbjct: 477 ASTGQWDDAARVRKMM 492



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 2/187 (1%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           + ++++ACA    L     +H+   R+ L  D  + ++L+ MY KCG +  A   FD +P
Sbjct: 65  YHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIP 124

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            R+V SW  +I+GYA++    +AL L   M      P   TF   L A    G    G +
Sbjct: 125 TRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIG-E 183

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
              +++  Y L   +   S ++D+  R  ++D      + +  + N + W  ++    R 
Sbjct: 184 QMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLD-SKNEVSWNALIAGFARK 242

Query: 744 NCRKTEL 750
              +T L
Sbjct: 243 GDGETTL 249


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 257/720 (35%), Positives = 383/720 (53%), Gaps = 31/720 (4%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRRKGKEVHGYLIR 284
           + L+S +   G+   A  +F +++Q+          +V+S     E    G+ +H   + 
Sbjct: 97  TVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVE 156

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK-DSVSWNTMISGLDQNGCYEEAIM 343
           +GL     V + LV+MY +CG++ D+ ++F  +    D V WN MI+   QNG   EA+ 
Sbjct: 157 AGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREALE 216

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ--QIHGEGLKLGLDSDVSVSNALLSL 401
            F  M + G+     + +S   +C+S   +   Q    H    + GL SDV V+ AL++ 
Sbjct: 217 IFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNA 276

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           YA  G +    + F  MPE + VSW S+I AFA    L+  AV+ +  M   G  P   T
Sbjct: 277 YARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGHLL--AVETFHAMLLEGVVPTRST 334

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
               L         +L   V A   +  VA +  I   L+  Y +C   +D  ++F+   
Sbjct: 335 LFAALEGCEDLHTARL---VEAIAQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSA-- 389

Query: 522 ERRDEVSWNS-----MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
             R+E  W++     MI+ Y           L    ++RG   D   + T L ACAS+A 
Sbjct: 390 --REEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAA 447

Query: 577 LERGMEVHAC-GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
           L  G ++HAC      L+ DV +G+A+V MY +CG +  A   FD MP R+  SWN+M+S
Sbjct: 448 LSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLS 507

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
             A+HG  +    LF  M  +G   + V F+ +LSAC+HAGLV+ G +HF +M+  +G++
Sbjct: 508 ASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVV 567

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           P  E + CMVDLLGR G L      +  MP+ P++  W  ++GAC       TE GR AA
Sbjct: 568 PATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYG--DTERGRFAA 625

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
             + E+   +   YV L N+Y++ G+WED A  RK M +  ++K  G S + ++  VH F
Sbjct: 626 ERVLELRANHTAAYVALCNIYSAAGRWEDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEF 685

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
           V  D SHP+ + IY +L+ +   +  AGY   T   L D+E E KE L+ +HSEK+A+AF
Sbjct: 686 VVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAF 745

Query: 876 -VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            +++      +R++KNLRVC DCH+A KFISK+ GREIV+RD  RFHHF DG CSCGDYW
Sbjct: 746 GMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 146/560 (26%), Positives = 246/560 (43%), Gaps = 56/560 (10%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D +L ++L+ +Y+R G L SA  +F ++  ++ V W  ++S Y  +G S  A  +F  ++
Sbjct: 61  DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           + G  L+     SVL AC          G  +H   +++      +V++ L++MYG C  
Sbjct: 121 QEGIALDAIVFVSVLSACS--SEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGS 178

Query: 139 STDCARRIFEEIETR-DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
             D A  +F  +E   D++ WN++I+  SQ G      ++F RM + G    + P+  TF
Sbjct: 179 LRD-ANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLG----IPPDLVTF 233

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            S+  A  SS    +  ++     + + GL SD+ V +ALV+ +AR G    AR+ F  M
Sbjct: 234 VSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAM 293

Query: 258 IQKNVVSMNGLME-----GRRKGKEV-HGYLI------RSGLF-------DM-------- 290
            ++N VS   ++      G     E  H  L+      RS LF       D+        
Sbjct: 294 PERNAVSWTSMIAAFAQIGHLLAVETFHAMLLEGVVPTRSTLFAALEGCEDLHTARLVEA 353

Query: 291 ----------VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN-----TMISGLDQN 335
                     VA+   LV  YA+C   +D+  VF     ++   W+      MI+   Q 
Sbjct: 354 IAQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFS---AREEGEWDAALVTAMIAVYAQC 410

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG-EGLKLGLDSDVSV 394
                    + A    G+       I+ L +CASL  +  G+QIH        LD DV++
Sbjct: 411 RDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTL 470

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            NA++S+Y   G L      F  MP  D++SWN+++ A A     V +    +  M + G
Sbjct: 471 GNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASA-QHGRVEDCCDLFRAMLQEG 529

Query: 455 WSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           +    V F+N+L+A +   + + G     A    + V   T     ++   G+ G + D 
Sbjct: 530 FDAERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADA 589

Query: 514 EKIFARMSERRDEVSWNSMI 533
             I   M    D  +W +++
Sbjct: 590 HGIVQAMPVPPDAATWMALM 609



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 151/361 (41%), Gaps = 55/361 (15%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +   K FH  + + G   DV +   L+N Y R G++  A + F  MP+RN+VSW  +++ 
Sbjct: 248 ASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAA 307

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           +   G    A + F  M+  G +  R  L + L  C++           V  +  +    
Sbjct: 308 FAQIG-HLLAVETFHAMLLEGVVPTRSTLFAALEGCED-----LHTARLVEAIAQEIGVA 361

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWN-----SIISVYSQRGDTISVF 175
            D  +   L+  Y  C    D A R+F     R+   W+     ++I+VY+Q  D  S F
Sbjct: 362 TDVAIVTDLVMAYARCDGQED-AIRVF---SAREEGEWDAALVTAMIAVYAQCRDRRSTF 417

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITAAYS-SVLSGSYLLQQILAMVKKAGLLSDLYVG 234
           KL+      G    + P+   + + + A  S + LS    +   +A  ++  L  D+ +G
Sbjct: 418 KLWGAAIERG----ISPDRILYITALDACASLAALSEGRQIHACVAADRR--LDRDVTLG 471

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVG 294
           +A+VS + + G+   AR  F+ M  ++ +S N ++                         
Sbjct: 472 NAIVSMYGQCGSLRDARDAFDGMPARDEISWNAML------------------------- 506

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGK----DSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
               +  A+ G ++D   +FR M+ +    + V++  ++S     G  E    +F AM  
Sbjct: 507 ----SASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFSAMTG 562

Query: 351 D 351
           D
Sbjct: 563 D 563



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 19/313 (6%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFD--EMPDRNSVSWACIVSGYTHKGMSNEACK 72
           G A DV +   L+  Y R      A ++F   E  + ++     +++ Y          K
Sbjct: 359 GVATDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFK 418

Query: 73  MFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVH-CLVLKSNQTFDGLVSNVLIA 131
           ++   +  G   +R    + L AC     +    G Q+H C+        D  + N +++
Sbjct: 419 LWGAAIERGISPDRILYITALDACASL--AALSEGRQIHACVAADRRLDRDVTLGNAIVS 476

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MYG C    D AR  F+ +  RD ISWN+++S  +Q G       LF  M +EGF     
Sbjct: 477 MYGQCGSLRD-ARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGF----D 531

Query: 192 PNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
                F +L++A A++ ++      +   AM    G++        +V    R G    A
Sbjct: 532 AERVAFLNLLSACAHAGLVEAG--CEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADA 589

Query: 251 RKIFEQM-IQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDM----VAVGNGLVNMYAKC 304
             I + M +  +  +   LM   R  G    G      + ++     A    L N+Y+  
Sbjct: 590 HGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAA 649

Query: 305 GTIDDSRSVFRFM 317
           G  +D+ +V + M
Sbjct: 650 GRWEDAAAVRKIM 662


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 245/698 (35%), Positives = 384/698 (55%), Gaps = 39/698 (5%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYA--KCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
           ++ KEVH  ++R+GLF      + L    A     T+D +R++F  +   +  +WNT+I 
Sbjct: 39  KQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIR 98

Query: 331 GL-DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
                +  ++  ++    + +   + + F+    + + + L    +G  +HG  +KL   
Sbjct: 99  AYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFG 158

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
            D+ + N+L+  Y   G LS   ++F  +   D VSWNS+I AFA       +A++ +L 
Sbjct: 159 MDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNC-PEDALELFLK 217

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M R    PN VT + +L+A +     + G  V + + +  +  + T+ NA+L  Y KCG 
Sbjct: 218 MERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGS 277

Query: 510 MDDCEKIFARMSER------------------------------RDEVSWNSMISGYIHN 539
           +DD +K+F  M ER                              ++  +WN +IS Y  N
Sbjct: 278 VDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQN 337

Query: 540 ELLPKAMNLV-WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
               +A+ +     + +  + D  T  + LSACA +  ++ G  +H    R  +  +  +
Sbjct: 338 GKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHL 397

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            S+LVDMY+KCG ++ A   F  +  R+VY W++MI+G   HG G  A+ LF +M+    
Sbjct: 398 ISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKV 457

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
            P+ VTF  VL ACSHAGLVDEG   F  M  VYG++P+++ ++CMVD+LGRAG L++  
Sbjct: 458 KPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAM 517

Query: 719 EFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYAS 778
           E IN+M  TP++ +W  +LGAC        ELG  A++ L ++EP+N    VLL+N+YA 
Sbjct: 518 ELINEMSTTPSASVWGALLGACSLH--MNVELGELASDQLLKLEPRNHGAIVLLSNIYAK 575

Query: 779 GGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQK 838
            G+WE V++ RK M++ E+KKE GCS +     VH F+ GD +HP    IY KL+E+  K
Sbjct: 576 TGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATK 635

Query: 839 MRDAGYVPQTKFALFDLEPES-KEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGD 896
           ++  GY P     L  +E +  KE  +S HSEK+A+AF ++T     PIR++KNLR+CGD
Sbjct: 636 LKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICGD 695

Query: 897 CHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CH+  K +S++  R+I+LRD  RFHHF DG CSC DYW
Sbjct: 696 CHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 137/538 (25%), Positives = 254/538 (47%), Gaps = 44/538 (8%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYV--RVGDLASASKLFDEMPDRNSVSWACIV 58
           SK  K  H ++L+ G  +D F  + L           L  A  LFD++P  N  +W  ++
Sbjct: 38  SKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLI 97

Query: 59  SGYTHKGMSNEACKMFKEMV-RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
             Y       ++  +F +++ +   L N++    V++A  E   S  + G  VH + +K 
Sbjct: 98  RAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKAS--RVGTAVHGMAIKL 155

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
           +   D  + N L+  YG+C + +  A R+F+ I  +D++SWNS+IS ++Q        +L
Sbjct: 156 SFGMDLYILNSLVRFYGACGDLS-MAERLFKGISCKDVVSWNSMISAFAQGNCPEDALEL 214

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F +M+RE    ++ PN  T   +++A    +       + + + +++ G+  DL + +A+
Sbjct: 215 FLKMERE----NVMPNSVTMVGVLSACAKKL--DLEFGRWVCSYIERKGIKVDLTLCNAM 268

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGL 297
           +  + + G+   A+K+F++M +++V S   +++G                          
Sbjct: 269 LDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDG-------------------------- 302

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
              YAK G  D +R VF  M  K+  +WN +IS  +QNG  +EA+  F  ++   +   +
Sbjct: 303 ---YAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPD 359

Query: 358 -FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
             +L+STLS+CA LG I LG  IH    + G+  +  + ++L+ +YA  G L + L+VF+
Sbjct: 360 EVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFY 419

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            + E D   W+++I            A+  + +M+ A   PN VTF N+L A S   +  
Sbjct: 420 SVEERDVYVWSAMIAGLG-MHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVD 478

Query: 477 LGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            G    H     Y V  E      ++   G+ G +++  ++   MS       W +++
Sbjct: 479 EGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALL 536



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 106/446 (23%), Positives = 193/446 (43%), Gaps = 76/446 (17%)

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSAL--VSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
           S S  L+++ A + + GL  D +  S L   S  +      YAR +F+Q+ Q N+ + N 
Sbjct: 36  SSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNT 95

Query: 268 L------------------------------------------MEGRRKGKEVHGYLIRS 285
           L                                          ++  R G  VHG  I+ 
Sbjct: 96  LIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKL 155

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
                + + N LV  Y  CG +  +  +F+ +  KD VSWN+MIS   Q  C E+A+  F
Sbjct: 156 SFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELF 215

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             M R+ +M ++ +++  LS+CA    +  G+ +     + G+  D+++ NA+L +Y   
Sbjct: 216 LKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKC 275

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFA-----DSEALV-------------------- 440
           G +    K+F  MPE D  SW  ++  +A     D+  LV                    
Sbjct: 276 GSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYE 335

Query: 441 -----SEAVKYYLDMRRAGWS-PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANET 494
                 EA+  + +++ +  + P+ VT ++ L+A +      LG  +H  + +  +    
Sbjct: 336 QNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNC 395

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
            + ++L+  Y KCG ++   ++F  + E RD   W++MI+G   +     A++L + M +
Sbjct: 396 HLISSLVDMYAKCGSLEKALEVFYSV-EERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQE 454

Query: 555 RGQRLDHFTFATVLSACASVATLERG 580
              + +  TF  VL AC+    ++ G
Sbjct: 455 AKVKPNSVTFTNVLCACSHAGLVDEG 480



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/350 (23%), Positives = 138/350 (39%), Gaps = 56/350 (16%)

Query: 11  ILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWA--------------- 55
           I + G   D+ LCN ++++Y + G +  A KLFDEMP+R+  SW                
Sbjct: 253 IERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAA 312

Query: 56  ----------------CIVSGYTHKGMSNEACKMFKEMVRAGFL-LNRYALGSVLRACQE 98
                            ++S Y   G   EA  +F E+  +     +   L S L AC +
Sbjct: 313 RLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQ 372

Query: 99  CGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISW 158
            G      G  +H  + +     +  + + L+ MY  C  S + A  +F  +E RD+  W
Sbjct: 373 LG--AIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKC-GSLEKALEVFYSVEERDVYVW 429

Query: 159 NSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQ 216
           +++I+     G   +   LF  MQ       +KPN  TF +++ A   + L   G     
Sbjct: 430 SAMIAGLGMHGRGKAAIDLFFEMQEA----KVKPNSVTFTNVLCACSHAGLVDEGRVFFH 485

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGK 276
           +   M    G++ ++   + +V    R G    A ++  +M      S+ G + G     
Sbjct: 486 E---MEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLG---AC 539

Query: 277 EVH-----GYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFRFM 317
            +H     G L    L  +    +G    L N+YAK G  +    + + M
Sbjct: 540 SLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLM 589


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/617 (38%), Positives = 356/617 (57%), Gaps = 6/617 (0%)

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQ 378
           + + S+N +I    + G  E+A+  F  M  D  +S +  ++ +T+ SC+ +  + +G+ 
Sbjct: 133 RSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRG 192

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           +     K G   D  V N+L+ +YA  G +     +F  +     ++WN++I  +  +  
Sbjct: 193 VQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGD 252

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
              E V+ +  M       + VT +++  A        LG  +     +  +     +  
Sbjct: 253 W-KEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLAT 311

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
           AL+  Y KCGE+D   ++F RM  R D V+W++MISGY  ++   +A+ +   M      
Sbjct: 312 ALVDMYAKCGELDKARRLFDRMHSR-DVVAWSAMISGYTQSDRCREALAIFNEMQGTEVN 370

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
            +  T  +VLSACA +  LE G  VH+   R  L   V++G+ALVD Y+KCG I  A + 
Sbjct: 371 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKA 430

Query: 619 FDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLV 678
           F+ MPVRN ++W ++I G A +G   +AL LFS M      P  VTF+GVL ACSH  LV
Sbjct: 431 FESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLV 490

Query: 679 DEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
           +EG +HF SM+Q YG+ P++E + CMVDLLGRAG +D+  +FI  MPI PN+++WR +L 
Sbjct: 491 EEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLS 550

Query: 739 ACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVK 798
           AC     +  E+G +A   +  ++P ++ NY+LL+N YAS G+W++ A  RK MKE  V+
Sbjct: 551 ACTVH--KNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVE 608

Query: 799 KEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPE 858
           K  GCS + ++  +  F A D  HP+   IYEK+ E+ + ++  GY+P T  A  D++  
Sbjct: 609 KIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVDEY 668

Query: 859 SKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDS 917
            K+  VS+HSEK+A+AF L ++     IR+ KNLRVC DCHSA K ISK+  REI++RD 
Sbjct: 669 EKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYNREIIVRDR 728

Query: 918 NRFHHFNDGKCSCGDYW 934
           NRFHHF DG CSC DYW
Sbjct: 729 NRFHHFKDGLCSCNDYW 745



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 197/431 (45%), Gaps = 26/431 (6%)

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVS------MNGLMEGRRK-----GKEVHGYLIRS 285
           L+  F R G+   A  +F +M+    VS       N +    R      G+ V  Y  + 
Sbjct: 141 LIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYAFKR 200

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
           G      V N L++MYA CG +  +  +F  +  K  ++WN MI+G  +NG ++E +  F
Sbjct: 201 GFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMF 260

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             M          +L+S  ++C  LG   LGQ I     + G+    +++ AL+ +YA  
Sbjct: 261 KGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKC 320

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
           G L +  ++F  M   D V+W+++I  +  S+    EA+  + +M+    +PN VT +++
Sbjct: 321 GELDKARRLFDRMHSRDVVAWSAMISGYTQSDR-CREALAIFNEMQGTEVNPNDVTMVSV 379

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           L+A +     + G  VH+ + + ++     +  AL+  Y KCG + D  K F  M   R+
Sbjct: 380 LSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPV-RN 438

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME--- 582
             +W ++I G   N    +A+ L   M++        TF  VL AC+    +E G     
Sbjct: 439 TWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFT 498

Query: 583 --VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYAR 639
                 G+   +E        +VD+  + G ID A +F   MP+  N   W +++S    
Sbjct: 499 SMTQDYGICPRIEH----YGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTV 554

Query: 640 HGH---GDKAL 647
           H +   G++AL
Sbjct: 555 HKNVEIGEEAL 565



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/425 (24%), Positives = 183/425 (43%), Gaps = 48/425 (11%)

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGS 212
           R   S+N +I  + + G       LF  M  +    ++ P+++T  + + +   S +   
Sbjct: 133 RSARSYNILIRSFLRAGHPEDALHLFVEMLDDT---AVSPDQHTVANTVKSC--SRMCDL 187

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR 272
            + + + A   K G + D +V ++L+  +A  G+   A  +F  +  K V++ N ++ G 
Sbjct: 188 SVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGY 247

Query: 273 RKG---KEV----HGYLIRSGLFDMVAV-------------------------------- 293
            K    KEV     G L     FD V +                                
Sbjct: 248 VKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSR 307

Query: 294 --GNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
                LV+MYAKCG +D +R +F  M  +D V+W+ MISG  Q+    EA+  F  M+  
Sbjct: 308 NLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGT 367

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
            +  ++ +++S LS+CA LG +  G+ +H    +  L   V +  AL+  YA  G +   
Sbjct: 368 EVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDA 427

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
           +K F  MP  +  +W ++I   A S     EA++ +  M  A   P  VTFI +L A S 
Sbjct: 428 VKAFESMPVRNTWTWTALIKGMA-SNGRSREALELFSSMLEANIEPTDVTFIGVLLACSH 486

Query: 472 FSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
             + + G +    + + Y +         ++   G+ G +D+  +    M    + V W 
Sbjct: 487 GCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWR 546

Query: 531 SMISG 535
           +++S 
Sbjct: 547 ALLSA 551



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/446 (23%), Positives = 191/446 (42%), Gaps = 61/446 (13%)

Query: 36  LASASKLFD--EMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV-RAGFLLNRYALGSV 92
           L+ A +LF     P R++ S+  ++  +   G   +A  +F EM+       +++ + + 
Sbjct: 118 LSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANT 177

Query: 93  LRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIET 152
           +++C          G  V     K     D  V N LI MY SC +    A  +F  ++ 
Sbjct: 178 VKSCSRM--CDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVV-AAHVLFHTVQV 234

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRM--QREGFRYSLKPNEYTFGSLITAAYSSVLS 210
           + +I+WN++I+ Y + GD   V ++F  M   R  F      +E T  S+ TA     L 
Sbjct: 235 KGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPF------DEVTLLSVATAC--GRLG 286

Query: 211 GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
            + L Q I    ++ G+L    + +ALV  +A+ G    AR++F++M  ++VV+ + ++ 
Sbjct: 287 DANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMIS 346

Query: 271 GRRK-----------------------------------------GKEVHGYLIRSGLFD 289
           G  +                                         GK VH Y+ R  L  
Sbjct: 347 GYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPL 406

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
            V +G  LV+ YAKCG I D+   F  M  +++ +W  +I G+  NG   EA+  F +M 
Sbjct: 407 TVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSML 466

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK--LGLDSDVSVSNALLSLYADAGY 407
              +  ++ + I  L +C S G ++   + H   +    G+   +     ++ L   AG 
Sbjct: 467 EANIEPTDVTFIGVLLAC-SHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGL 525

Query: 408 LSRCLKVFFLMP-EHDQVSWNSVIGA 432
           +    +    MP E + V W +++ A
Sbjct: 526 IDEAYQFIRNMPIEPNAVVWRALLSA 551



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 178/406 (43%), Gaps = 59/406 (14%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
            K GF  D F+ N+LI++Y   GD+ +A  LF  +  +  ++W  +++GY   G   E  
Sbjct: 198 FKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVV 257

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
           +MFK M+      +   L SV  AC   G +    G  +     +        ++  L+ 
Sbjct: 258 EMFKGMLEVRAPFDEVTLLSVATACGRLGDAN--LGQWIAEYAEEKGMLRSRNLATALVD 315

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY  C E  D ARR+F+ + +RD+++W+++IS Y+Q         +F+ MQ       + 
Sbjct: 316 MYAKCGE-LDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGT----EVN 370

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           PN+ T  S+++A   +VL      + + + +++  L   + +G+ALV  +A+ G    A 
Sbjct: 371 PNDVTMVSVLSAC--AVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAV 428

Query: 252 KIFEQMIQKNVVSMNGLMEG------RRKGKEV------------------------HGY 281
           K FE M  +N  +   L++G       R+  E+                        HG 
Sbjct: 429 KAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGC 488

Query: 282 LIRSGLFDMVAVGNG------------LVNMYAKCGTIDDSRSVFRFM-IGKDSVSWNTM 328
           L+  G     ++               +V++  + G ID++    R M I  ++V W  +
Sbjct: 489 LVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRAL 548

Query: 329 ISGLDQNGCY---EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           +S    +      EEA+     +  D   S N+ L+S  ++ AS+G
Sbjct: 549 LSACTVHKNVEIGEEALKQIVPL--DPCHSGNYILLS--NTYASVG 590



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 103/267 (38%), Gaps = 51/267 (19%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  I +      V L   L++ Y + G +  A K F+ MP RN+ +W  ++ G    
Sbjct: 393 KWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASN 452

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G S EA ++F  M+ A           VL AC               CLV +  + F  +
Sbjct: 453 GRSREALELFSSMLEANIEPTDVTFIGVLLACSH------------GCLVEEGRRHFTSM 500

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
             +     YG C             IE      +  ++ +  + G     ++    M   
Sbjct: 501 TQD-----YGIC-----------PRIE-----HYGCMVDLLGRAGLIDEAYQFIRNM--- 536

Query: 185 GFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS--ALVSG 240
                ++PN   + +L++A   + +V  G   L+QI+        L   + G+   L + 
Sbjct: 537 ----PIEPNAVVWRALLSACTVHKNVEIGEEALKQIVP-------LDPCHSGNYILLSNT 585

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNG 267
           +A +G +  A  + ++M +K V  + G
Sbjct: 586 YASVGQWKNAAMVRKEMKEKGVEKIPG 612


>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
          Length = 503

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/494 (42%), Positives = 319/494 (64%), Gaps = 4/494 (0%)

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           +A++ +  + ++G   + +T      A     +   G Q+HA  IK    ++  + + +L
Sbjct: 13  KALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGIL 72

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
             Y KCG+M +   +F  +S   D+V+W SMISG + N    +A+ +   M Q     D 
Sbjct: 73  DMYIKCGDMVNAGIVFNYISAP-DDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDE 131

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
           +TFAT++ A + V  LE+G ++HA  ++     D  +G++LVDMY+KCG I+ A R F  
Sbjct: 132 YTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKK 191

Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           M VRN+  WN+M+ G A+HG+ ++A+ LF  MK  G  PD V+F+G+LSACSHAGL  E 
Sbjct: 192 MNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEA 251

Query: 682 FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACC 741
           +++  SM   YG+ P++E +SC+VD LGRAG + + ++ I  MP   ++ I R +LGAC 
Sbjct: 252 YEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACR 311

Query: 742 RANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA 801
                  E G++ A  LF +EP ++  YVLL+N+YA+  +W+DV  ARK MK   VKK+ 
Sbjct: 312 IQG--DVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDP 369

Query: 802 GCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKE 861
           G SW+ +K+ +H+FV  D SHP+ D+IY+K++E+ + +R+ GYVP T+F L D+E E KE
Sbjct: 370 GFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKE 429

Query: 862 DLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRF 920
             + YHSEK+A+A+ +++  +   IR++KNLRVCGDCH+A K+ISK+  REIVLRD+NRF
Sbjct: 430 RSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRF 489

Query: 921 HHFNDGKCSCGDYW 934
           HHF DG CSCGDYW
Sbjct: 490 HHFRDGVCSCGDYW 503



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 148/302 (49%), Gaps = 3/302 (0%)

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           ++A+  F  + + G  S   +L +   +C  L  +  G+QIH   +K G DSD+ V++ +
Sbjct: 12  KKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGI 71

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           L +Y   G +     VF  +   D V+W S+I    D+     +A++ Y  MR++   P+
Sbjct: 72  LDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDN-GNEDQALRIYHRMRQSRVMPD 130

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
             TF  ++ A+S  +  + G Q+HA VIK +  ++  +  +L+  Y KCG ++D  ++F 
Sbjct: 131 EYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFK 190

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
           +M+ R   + WN+M+ G   +    +A+NL   M   G   D  +F  +LSAC+      
Sbjct: 191 KMNVRNIAL-WNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTS 249

Query: 579 RGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
              E +H+      +E ++   S LVD   + G +  A +  + MP +   S N  + G 
Sbjct: 250 EAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGA 309

Query: 638 AR 639
            R
Sbjct: 310 CR 311



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 128/248 (51%), Gaps = 2/248 (0%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +GK++H + I++G    + V +G+++MY KCG + ++  VF ++   D V+W +MISG  
Sbjct: 48  QGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCV 107

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            NG  ++A+  +  MR+  +M   ++  + + + + +  +  G+Q+H   +KL   SD  
Sbjct: 108 DNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPF 167

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V  +L+ +YA  G +    ++F  M   +   WN+++   A       EAV  +  M+  
Sbjct: 168 VGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLA-QHGNAEEAVNLFKSMKSH 226

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           G  P+ V+FI IL+A S   +    ++ +H+    Y +  E    + L+   G+ G + +
Sbjct: 227 GIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQE 286

Query: 513 CEKIFARM 520
            +K+   M
Sbjct: 287 ADKVIETM 294



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 157/324 (48%), Gaps = 16/324 (4%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   +K GF  D+ + + ++++Y++ GD+ +A  +F+ +   + V+W  ++SG    
Sbjct: 50  KQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDN 109

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G  ++A +++  M ++  + + Y   ++++A   C  +  + G Q+H  V+K +   D  
Sbjct: 110 GNEDQALRIYHRMRQSRVMPDEYTFATLIKA-SSC-VTALEQGRQLHANVIKLDCVSDPF 167

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V   L+ MY  C    D A R+F+++  R++  WN+++   +Q G+      LF  M+  
Sbjct: 168 VGTSLVDMYAKCGNIED-AYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSH 226

Query: 185 GFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           G    ++P+  +F  +++A +++ + S +Y  + + +M    G+  ++   S LV    R
Sbjct: 227 G----IEPDRVSFIGILSACSHAGLTSEAY--EYLHSMPNDYGIEPEIEHYSCLVDALGR 280

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----L 297
            G    A K+ E M  K   S+N  + G  R +G    G  + + LF +    +     L
Sbjct: 281 AGLVQEADKVIETMPFKASASINRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLL 340

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKD 321
            N+YA     DD     + M  K+
Sbjct: 341 SNIYAAANRWDDVTDARKMMKRKN 364



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 107/212 (50%), Gaps = 14/212 (6%)

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC 591
           M+ GYI      KA+ L   + + G++ D  T AT   AC  +  L++G ++HA  ++A 
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
            + D+ + S ++DMY KCG +  A   F+ +   +  +W SMISG   +G+ D+AL ++ 
Sbjct: 61  FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS------CMV 705
           +M+    +PD  TF  ++ A S    +++G        Q++  + +L+  S       +V
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQG-------RQLHANVIKLDCVSDPFVGTSLV 173

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
           D+  + G ++       KM +  N  +W  +L
Sbjct: 174 DMYAKCGNIEDAYRLFKKMNVR-NIALWNAML 204



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 130/310 (41%), Gaps = 57/310 (18%)

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL----QQILAMVKKA 225
           D     +LFS + + G +             IT A ++   G  +L    +QI A   KA
Sbjct: 10  DGKKALELFSLIHKSGEK----------SDQITLATAAKACGCLVLLDQGKQIHAHAIKA 59

Query: 226 GLLSDLYVGS-------------------------------ALVSGFARLGNFYYARKIF 254
           G  SDL+V S                               +++SG    GN   A +I+
Sbjct: 60  GFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIY 119

Query: 255 EQMIQKNV----------VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
            +M Q  V          +  +  +    +G+++H  +I+        VG  LV+MYAKC
Sbjct: 120 HRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKC 179

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G I+D+  +F+ M  ++   WN M+ GL Q+G  EEA+  F +M+  G+     S I  L
Sbjct: 180 GNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGIL 239

Query: 365 SSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           S+C+  G      + +H      G++ ++   + L+     AG +    KV   MP    
Sbjct: 240 SACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKAS 299

Query: 424 VSWN-SVIGA 432
            S N +++GA
Sbjct: 300 ASINRALLGA 309


>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
 gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/671 (35%), Positives = 373/671 (55%), Gaps = 20/671 (2%)

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VH ++I++G  +   V + LVN+YAKCG + ++R VF  +  ++ V W T+++G  QN  
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
            E A+  F  M   G   SNF+L   L++C+SL  I LG+Q H   +K  +  D S+ NA
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L SLY+  G L   +K F    E D +SW ++I A  D+       ++ +++M      P
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDN-GRAGMGLRLFIEMLFENVEP 180

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           N  T  ++L+  S+     LG QVH+   K    +   I N+L+  Y KCG +D+ + +F
Sbjct: 181 NDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLF 240

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPK-----------AMNLVWFMMQRGQRLDHFTFAT 566
            RM E ++ ++WN+MI+G+     L K           A+ +   + + G++ D FT ++
Sbjct: 241 NRM-EYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSS 299

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           +L+ C+ +A LE+G ++HA  +++    DVV+G+ALVDMY KCG I+ A + F  M  R 
Sbjct: 300 ILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRT 359

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
           + SW SMI+ +ARHG    AL LF  M+L G  P+ +TFVGVL+ACSHAG+VDE  ++F+
Sbjct: 360 LISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFE 419

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
            M + Y + P ++ + C+VD+  R G LD+  + I +M + PN  IW  ++  C   N  
Sbjct: 420 IMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGC--RNHG 477

Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
             ELG  AA  L +++P++   YV+L NMY S  +WEDV+  R+ MKE +V K    S +
Sbjct: 478 NEELGFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRI 537

Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFD----LEPESKED 862
           ++K  VH F   +  H     ++  L +L  + +  GY       + D       E    
Sbjct: 538 SIKGEVHSFKTNNRLHNHNAELHTLLNDLVDRAKSLGYEQLENMEVIDDEEEEAEEKAFS 597

Query: 863 LVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFH 921
              YHSEK+AV F +L      PIR++K++ +C DCH   K +S    R I+++D  R H
Sbjct: 598 SAVYHSEKLAVTFGLLNTPIGAPIRVIKSVTMCKDCHDFMKVVSSQTTRHIIIKDGKRLH 657

Query: 922 HFNDGKCSCGD 932
            F +G+CSC D
Sbjct: 658 KFVNGQCSCAD 668



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 221/477 (46%), Gaps = 56/477 (11%)

Query: 220 AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----- 274
           A V K G   + +V S LV+ +A+ G    ARK+F+ + ++NVV    LM G  +     
Sbjct: 4   AHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQPE 63

Query: 275 ------------------------------------GKEVHGYLIRSGLFDMVAVGNGLV 298
                                               GK+ H ++I+  +    ++GN L 
Sbjct: 64  VAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALC 123

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
           ++Y+K G++D S   FR    KD +SW T+IS    NG     +  F  M  + +  ++F
Sbjct: 124 SLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDF 183

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           +L S LS C+++    LG Q+H    KLG +S++ ++N+L+ LY   G +     +F  M
Sbjct: 184 TLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRM 243

Query: 419 PEHDQVSWNSVIGAFADSEALV----------SEAVKYYLDMRRAGWSPNGVTFINILAA 468
              + ++WN++I   A +  L           +EA+  YL + R+G  P+  T  +IL  
Sbjct: 244 EYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTV 303

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
            S  +  + G Q+HAQ IK    ++  +  AL+  Y KCG ++   K F  MS  R  +S
Sbjct: 304 CSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMST-RTLIS 362

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           W SMI+ +  +     A+ L   M   G R +  TF  VL+AC+    ++  +E     +
Sbjct: 363 WTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEI-M 421

Query: 589 RACLEFDVVIG--SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGH 642
           +   +   V+     LVDM+ + GR+D A      M V  N + W  +I+G   HG+
Sbjct: 422 QKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGN 478



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 191/420 (45%), Gaps = 61/420 (14%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           + H  ++K G   + F+ + L+NVY + G + +A K+FD +P RN V W  +++GY    
Sbjct: 1   MVHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNS 60

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
               A ++F +M+ +G   + + L   L AC          G Q H  ++K   + D  +
Sbjct: 61  QPEVAVEVFGDMLESGSFPSNFTLSIALNACSSL--ESITLGKQFHAFIIKYRISHDSSI 118

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
            N L ++Y S   S D + + F E   +D+ISW +IIS     G      +LF  M  E 
Sbjct: 119 GNALCSLY-SKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFE- 176

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
              +++PN++T  S+++    S +  S L  Q+ ++  K G  S+L + ++LV  + + G
Sbjct: 177 ---NVEPNDFTLTSVLSLC--STIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCG 231

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGR--------------------------------- 272
               A+ +F +M  KN+++ N ++ G                                  
Sbjct: 232 CIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRK 291

Query: 273 -------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
                               +G+++H   I+SG    V VG  LV+MY KCG+I+ +R  
Sbjct: 292 PDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKA 351

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           F  M  +  +SW +MI+   ++G  + A+  F  MR  G   +  + +  L++C+  G +
Sbjct: 352 FLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMV 411



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 156/333 (46%), Gaps = 32/333 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K FH  I+K+  ++D  + N L ++Y + G L S+ K F E  +++ +SW  I+S     
Sbjct: 101 KQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDN 160

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G +    ++F EM+      N + L SVL  C     S    GMQVH L  K     +  
Sbjct: 161 GRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSS--DLGMQVHSLSTKLGHESNLR 218

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDT-----------IS 173
           ++N L+ +Y  C    D A+ +F  +E ++LI+WN++I+ ++Q  D              
Sbjct: 219 ITNSLVYLYLKC-GCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTE 277

Query: 174 VFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYV 233
              ++ ++ R G     KP+ +T  S++T    S L+     +QI A   K+G LSD+ V
Sbjct: 278 ALGMYLKLNRSG----RKPDLFTLSSILTVC--SRLAALEQGEQIHAQTIKSGFLSDVVV 331

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMVA 292
           G+ALV  + + G+   ARK F  M  + ++S   ++    R G+  H   +     DM  
Sbjct: 332 GTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQL---FEDMRL 388

Query: 293 VG-----NGLVNMYAKC---GTIDDSRSVFRFM 317
            G        V + A C   G +D++   F  M
Sbjct: 389 AGFRPNQITFVGVLAACSHAGMVDEALEYFEIM 421


>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 595

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/571 (41%), Positives = 351/571 (61%), Gaps = 22/571 (3%)

Query: 377 QQIHGEGLKLGLDSDVSVSNA---------LLSLYADAGYLSRCLKVFFLMPEHDQV-SW 426
           +QIH   ++ G    VS+S+A         L+SL +    +S   KVF  + +   V  W
Sbjct: 34  RQIHAFSIRNG----VSISDAELGKHLIFYLVSLPSPPP-MSYAHKVFSKIEKPINVFIW 88

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGW-SPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           N++I  +A+    VS AV  Y +MR +G+  P+  T+  +L A    +  +LG  +H+ V
Sbjct: 89  NTLIRGYAEIGNSVS-AVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVV 147

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
           I+    +   ++N+LL  Y  CG++    K+F +M E+ D V+WNS+I+G+  N    +A
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK-DLVAWNSVINGFAENGKPEEA 206

Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
           + L   M  +G + D FT  ++LSACA +  L  G   H   ++  L  ++   + L+D+
Sbjct: 207 LALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDL 266

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK-LDGPLPDHVT 664
           Y++CGR++ A   FD M  +N  SW S+I G A +G G +A+ LF  M+  +G LP  +T
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEIT 326

Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           FVG+L ACSH G+V EGF++F+ MS+ Y + P++E F CMVDLL RAG++ K  E+I KM
Sbjct: 327 FVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKM 386

Query: 725 PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
           P+ PN +IWRT+LGAC       ++L   A   + ++EP ++ +YVLL+NMYAS  +W D
Sbjct: 387 PMQPNVVIWRTLLGACTVHG--DSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSD 444

Query: 785 VAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGY 844
           V K RK M    V+K  G S V + + VH F+ GD+SHP+ D+IY KLKE+  ++R  GY
Sbjct: 445 VQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGY 504

Query: 845 VPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL-TRNSKLPIRIMKNLRVCGDCHSAFKF 903
           VPQ      D+E E KE+ + YHSEKIA+AF+L +   + PIR++KNL+VC DCH A K 
Sbjct: 505 VPQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNLKVCADCHLAIKL 564

Query: 904 ISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +SK+  REIV+RD +RFHHF +G CSC DYW
Sbjct: 565 VSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 161/317 (50%), Gaps = 14/317 (4%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN-----------GLMEGRRKGKEV 278
           ++++ + L+ G+A +GN   A  ++ +M     V  +           G M   R G+ +
Sbjct: 84  NVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETI 143

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H  +IRSG   ++ V N L+++YA CG +  +  VF  M  KD V+WN++I+G  +NG  
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           EEA+  +  M   G+    F+++S LS+CA +G + LG++ H   +K+GL  ++  SN L
Sbjct: 204 EEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVL 263

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR-RAGWSP 457
           L LYA  G +     +F  M + + VSW S+I   A    L  EA++ + +M  + G  P
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA-VNGLGKEAIELFKNMESKEGLLP 322

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKI 516
             +TF+ IL A S   M K G +   ++  +Y +         ++    + G++    + 
Sbjct: 323 CEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEY 382

Query: 517 FARMSERRDEVSWNSMI 533
             +M  + + V W +++
Sbjct: 383 ILKMPMQPNVVIWRTLL 399



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 108/198 (54%), Gaps = 8/198 (4%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +++ GF   +++ N+L+++Y   GD+ASA K+FD+MP+++ V+W  +++G+   G 
Sbjct: 143 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 202

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA  ++ EM   G   + + + S+L AC + G      G + H  ++K   T +   S
Sbjct: 203 PEEALALYTEMDLKGIKPDGFTIVSLLSACAKIG--ALTLGKRFHVYMIKVGLTRNLHSS 260

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ-REG 185
           NVL+ +Y  C    + A+ +F+E+  ++ +SW S+I   +  G      +LF  M+ +EG
Sbjct: 261 NVLLDLYARC-GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEG 319

Query: 186 FRYSLKPNEYTFGSLITA 203
               L P E TF  ++ A
Sbjct: 320 ----LLPCEITFVGILYA 333



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 142/291 (48%), Gaps = 18/291 (6%)

Query: 36  LASASKLFDEMPDR-NSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL-LNRYALGSVL 93
           ++ A K+F ++    N   W  ++ GY   G S  A  +++EM  +GF+  + +    +L
Sbjct: 69  MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLL 128

Query: 94  RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
           +A  +   +  + G  +H +V++S       V N L+ +Y +C +    A ++F+++  +
Sbjct: 129 KAVGKM--ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVAS-AYKVFDKMPEK 185

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY 213
           DL++WNS+I+ +++ G       L++ M  +G    +KP+ +T  SL++A   + +    
Sbjct: 186 DLVAWNSVINGFAENGKPEEALALYTEMDLKG----IKPDGFTIVSLLSAC--AKIGALT 239

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-- 271
           L ++    + K GL  +L+  + L+  +AR G    A+ +F++M+ KN VS   L+ G  
Sbjct: 240 LGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 299

Query: 272 -RRKGKEV----HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
               GKE          + GL        G++   + CG + +    FR M
Sbjct: 300 VNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM 350



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 3/106 (2%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K FH+ ++K G   ++   N L+++Y R G +  A  LFDEM D+NSVSW  ++ G   
Sbjct: 241 GKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 300

Query: 64  KGMSNEACKMFKEM-VRAGFLLNRYALGSVLRACQECG--PSGFKF 106
            G+  EA ++FK M  + G L        +L AC  CG    GF++
Sbjct: 301 NGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEY 346


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 245/706 (34%), Positives = 367/706 (51%), Gaps = 36/706 (5%)

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM--YAKCGTIDDSRSVFRFMIG 319
           ++S+    E   + ++VH   I+ GL     + N ++      + G    +R +F  +  
Sbjct: 21  LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 80

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
            +   WNTMI G  +    +  +  +  M R G+    ++             +  G+Q+
Sbjct: 81  PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQL 140

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           HG  LK GL  +V V  AL+ +Y   G L     VF + P+ D ++WN +I A+ +    
Sbjct: 141 HGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAY-NKVGK 199

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
             E+ + +L M      P  VT + +L+A S     + G +VH+ V    V +   +ENA
Sbjct: 200 FEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENA 259

Query: 500 LLSCYGKCGEMDDCEKIFARMSER------------------------------RDEVSW 529
           ++  Y  CGEMD    IF  M+ R                              +D VSW
Sbjct: 260 MIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSW 319

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
            +MI GYI +    +A+ L   M     + D FT  +VL+ACA +  LE G  +     R
Sbjct: 320 TAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDR 379

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
             ++ D+ + +AL+DMY KCG +D A   F  M  R+ ++W +MI G A +GHG+KAL +
Sbjct: 380 NKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDM 439

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           FS M     LPD +T++GVLSAC+H GLVD+G K+F  M+  +G+ P +  + C+VDLL 
Sbjct: 440 FSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLA 499

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
           RAG L +  E I  MPI  NS++W  +L  C     R++++       + E+EP N   Y
Sbjct: 500 RAGRLKEAYEVIENMPIKANSIVWGALLAGC--RVYRESDMAEMVVKQILELEPDNGAVY 557

Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIY 829
           VLL N+YA+  +W D+ + R+ M +  +KK  GCS + M   VH FVAGD SHP+   I 
Sbjct: 558 VLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNID 617

Query: 830 EKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIM 888
            KL ++ Q ++ AGY P       D+  E KE+ V  HSEK+A+AF L  +   + IRI 
Sbjct: 618 AKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRIT 677

Query: 889 KNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           KNLR+C DCH+  K +SK+  RE+++RD  RFHHF  G CSC DYW
Sbjct: 678 KNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 148/607 (24%), Positives = 262/607 (43%), Gaps = 118/607 (19%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAM-----YGSCLESTDCARRIFEEIETRDLISWNSIIS 163
           QVHC  +K     + ++ N ++       YG        ARR+F+EI   +L  WN++I 
Sbjct: 36  QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGD----FQYARRLFDEIPEPNLFIWNTMI- 90

Query: 164 VYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVK 223
               RG        +SR+               F  L  + Y  +L              
Sbjct: 91  ----RG--------YSRLD--------------FPQLGVSLYLEML-------------- 110

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLI 283
           + G+  D Y    L  GF R     Y                         G+++HG+++
Sbjct: 111 RRGVKPDRYTFPFLFKGFTRDIALEY-------------------------GRQLHGHVL 145

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
           + GL   V V   LV MY  CG +D +R VF      D ++WN +IS  ++ G +EE+  
Sbjct: 146 KHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRR 205

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            F  M    ++ +  +L+  LS+C+ L  +  G+++H       ++S++ + NA++ +YA
Sbjct: 206 LFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYA 265

Query: 404 DAGYLSRCLKVFF-------------------------------LMPEHDQVSWNSVIGA 432
           D G +   L +F                                 MPE D VSW ++I  
Sbjct: 266 DCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDG 325

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN 492
           +  S     EA++ + +M+     P+  T +++L A +     +LG  +   + +  + N
Sbjct: 326 YIRSNRF-KEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKN 384

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
           +  + NAL+  Y KCG++D  E IF  MS+ RD+ +W +MI G   N    KA+++   M
Sbjct: 385 DLFVRNALIDMYFKCGDVDKAESIFREMSQ-RDKFTWTAMIVGLAVNGHGEKALDMFSNM 443

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVH-ACGVRACLEFDVVIGSALVDMYSKCGR 611
           ++     D  T+  VLSAC     +++G +       +  +E ++     LVD+ ++ GR
Sbjct: 444 LKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGR 503

Query: 612 IDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKALTLFSQ-MKLDGPLPD----HVTF 665
           +  A    + MP++ N   W ++++G   +   D A  +  Q ++L+   PD    +V  
Sbjct: 504 LKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE---PDNGAVYVLL 560

Query: 666 VGVLSAC 672
             + +AC
Sbjct: 561 CNIYAAC 567



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/531 (23%), Positives = 239/531 (45%), Gaps = 42/531 (7%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYV--RVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           H Q +K G   +  L N ++        GD   A +LFDE+P+ N   W  ++ GY+   
Sbjct: 38  HCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLD 97

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
                  ++ EM+R G   +RY    + +          ++G Q+H  VLK    ++  V
Sbjct: 98  FPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR--DIALEYGRQLHGHVLKHGLQYNVFV 155

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
              L+ MY  C +  D AR +F+     D+I+WN IIS Y++ G      +LF  M+ + 
Sbjct: 156 HTALVQMYLLCGQ-LDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDK- 213

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
               + P   T   +++A   S L      +++ + VK   + S+L + +A++  +A  G
Sbjct: 214 ---QVLPTTVTLVLVLSAC--SKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCG 268

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
               A  IF  M  ++++S   ++ G                             +   G
Sbjct: 269 EMDSALGIFRSMNNRDIISWTTIVSG-----------------------------FTNLG 299

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            ID +R+ F  M  KD VSW  MI G  ++  ++EA+  F  M+   +    F+++S L+
Sbjct: 300 EIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLT 359

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           +CA LG + LG+ I     +  + +D+ V NAL+ +Y   G + +   +F  M + D+ +
Sbjct: 360 ACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFT 419

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           W ++I   A       +A+  + +M +A   P+ +T+I +L+A +   +   G +   ++
Sbjct: 420 WTAMIVGLA-VNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRM 478

Query: 486 I-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             ++ +         L+    + G + +  ++   M  + + + W ++++G
Sbjct: 479 TSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAG 529



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 164/350 (46%), Gaps = 17/350 (4%)

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS--CYGKCGEMDD 512
           +SP     I++L    S  M +L  QVH Q IK  +     ++N +++  C  + G+   
Sbjct: 14  FSPPTHPLISLLETCES--MDQL-QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQY 70

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
             ++F  + E  +   WN+MI GY   +     ++L   M++RG + D +TF  +     
Sbjct: 71  ARRLFDEIPEP-NLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFT 129

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
               LE G ++H   ++  L+++V + +ALV MY  CG++D A   FD+ P  +V +WN 
Sbjct: 130 RDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNM 189

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           +IS Y + G  +++  LF  M+    LP  VT V VLSACS    +  G K   S  +  
Sbjct: 190 IISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTG-KKVHSYVKNC 248

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
            +   L   + M+D+    GE+D        M    + + W T++          T LG 
Sbjct: 249 KVESNLVLENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIVSGF-------TNLGE 300

Query: 753 --KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKE 800
              A N   +M  ++ V++  + + Y    ++++  +  + M+   VK +
Sbjct: 301 IDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPD 350



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 140/315 (44%), Gaps = 28/315 (8%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+    T+++ +  +G++  A   FD+MP+++ VSW  ++ GY       EA ++F+ M 
Sbjct: 284 DIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQ 343

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
                 + + + SVL AC   G    + G  +   + ++    D  V N LI MY  C +
Sbjct: 344 ATNVKPDEFTMVSVLTACAHLG--ALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGD 401

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             D A  IF E+  RD  +W ++I   +  G       +FS M     + S+ P+E T+ 
Sbjct: 402 -VDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNM----LKASILPDEITYI 456

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM- 257
            +++A   + L      +  L M  + G+  ++     LV   AR G    A ++ E M 
Sbjct: 457 GVLSACTHTGLVDKG-RKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMP 515

Query: 258 IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMV------------AVGNGLVNMYAKCG 305
           I+ N +    L+ G R  +E       S + +MV            AV   L N+YA C 
Sbjct: 516 IKANSIVWGALLAGCRVYRE-------SDMAEMVVKQILELEPDNGAVYVLLCNIYAACK 568

Query: 306 TIDDSRSVFRFMIGK 320
             +D R + + M+ K
Sbjct: 569 RWNDLRELRQMMMDK 583


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 252/676 (37%), Positives = 386/676 (57%), Gaps = 18/676 (2%)

Query: 273 RKGKEVHGYLIRSGLFD--MVAVGNGLVNMYAKCGTIDDSRSVFRFMI-GK-DSVSWNTM 328
           R G+E H + +++GL         N L++MYA+ G + D++ +F     G+ D V+WNTM
Sbjct: 185 RLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTM 244

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG- 387
           +S L Q+G ++EA+     M   G+     +  S L +C+ L  + +G+++H   +K   
Sbjct: 245 VSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDE 304

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV--SWNSVIGAFADSEALVSEAVK 445
           L ++  V++AL+ +YA    + +  +VF ++P+  +    WN++I  +A +  +  EA++
Sbjct: 305 LAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQA-GMDEEALR 363

Query: 446 YYLDMR-RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
            +  M   AG+ P   T  ++L A +          VH  V+K  +A    ++NAL+  Y
Sbjct: 364 LFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMY 423

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR---GQRLDH 561
            + G+ D   +IFA M +  D VSWN++I+G +    +  A  L   M Q    G   + 
Sbjct: 424 ARLGKTDVARRIFA-MVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNA 482

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
            T  T+L  CA +A   RG E+H   VR  L+ DV +GSALVDMY+KCG +  +   FD 
Sbjct: 483 ITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDR 542

Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDE 680
           +P RN  +WN +I  Y  HG G +A  LF +M   G   P+ VTF+  L+ACSH+G+VD 
Sbjct: 543 LPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDR 602

Query: 681 GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL-IWRTVLGA 739
           G + F +M + +G+ P  +  +C+VD+LGRAG LD+    +  M      +  W T+LGA
Sbjct: 603 GLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGA 662

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKK 799
           C R + R   LG  A   L E+EP+ A +YVLL N+Y++ G+W   A+ R  M+   V K
Sbjct: 663 C-RLH-RNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAK 720

Query: 800 EAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES 859
           E GCSW+ +   +H F+AG+ +HP  + ++  ++ L  +M   GY P T   L D++   
Sbjct: 721 EPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGD 780

Query: 860 KEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSN 918
           K  ++  HSEK+A+AF L R +    IR+ KNLRVC DCH A KF+SK+VGREIVLRD  
Sbjct: 781 KAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVR 840

Query: 919 RFHHFNDGKCSCGDYW 934
           RFHHF +G+CSCGDYW
Sbjct: 841 RFHHFRNGQCSCGDYW 856



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 234/485 (48%), Gaps = 21/485 (4%)

Query: 273 RKGKEVHGYLIRSGLF--DMVAVGNGLVNMYAKCGTIDDSRSVFRFMI--GKDSVSWNTM 328
           R  + +H   +R GL      AV N L+  YA+CG +  +  VF  +     D+VS+N++
Sbjct: 76  RSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSL 135

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL----GWIMLGQQIHGEGL 384
           IS L     ++ A+    AM   G   ++F+L+S L + + L      + LG++ H   L
Sbjct: 136 ISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFAL 195

Query: 385 KLGL--DSDVSVSNALLSLYADAGYLSRCLKVFF-LMP-EHDQVSWNSVIGAFADSEALV 440
           K GL         NALLS+YA  G ++   ++F    P   D V+WN+++     S  + 
Sbjct: 196 KNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQS-GMF 254

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN-VANETTIENA 499
            EAV+   DM   G  P+GVTF + L A S   +  +G ++HA VIK + +A  + + +A
Sbjct: 255 DEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASA 314

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVS-WNSMISGYIHNELLPKAMNLVWFM-MQRGQ 557
           L+  Y    ++    ++F  + +   ++  WN+MI GY    +  +A+ L   M  + G 
Sbjct: 315 LVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGF 374

Query: 558 RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
                T A+VL ACA          VH   V+  +  +  + +AL+DMY++ G+ D A R
Sbjct: 375 VPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARR 434

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTL---FSQMKLDGPLPDHVTFVGVLSACSH 674
            F ++ + +V SWN++I+G    GH   A  L     Q++  G +P+ +T + +L  C+ 
Sbjct: 435 IFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAI 494

Query: 675 AGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWR 734
                 G K     +  + L   +   S +VD+  + G L       +++P   N++ W 
Sbjct: 495 LAAPARG-KEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP-RRNTITWN 552

Query: 735 TVLGA 739
            ++ A
Sbjct: 553 VLIMA 557



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 220/481 (45%), Gaps = 65/481 (13%)

Query: 8   HLQILKHGF--AYDVFLCNTLINVYVRVGDLASASKLF-DEMPDR-NSVSWACIVSGYTH 63
           H   LK+G    +  F  N L+++Y R+G +A A +LF    P R + V+W  +VS    
Sbjct: 191 HAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQ 250

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-TFD 122
            GM +EA +   +MV  G   +     S L AC          G ++H  V+K ++   +
Sbjct: 251 SGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRL--ELLDVGREMHAYVIKDDELAAN 308

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIET--RDLISWNSIISVYSQRGDTISVFKLFSR 180
             V++ L+ MY +  E    AR++F+ +    + L  WN++I  Y+Q G      +LF+R
Sbjct: 309 SFVASALVDMYAT-HEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFAR 367

Query: 181 MQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           M+ E       P E T  S++ A A S   +G    + +   V K G+  + +V +AL+ 
Sbjct: 368 MEAEA---GFVPCETTMASVLPACARSEAFAGK---EAVHGYVVKRGMAGNRFVQNALMD 421

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------------------------- 271
            +ARLG    AR+IF  +   +VVS N L+ G                            
Sbjct: 422 MYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPN 481

Query: 272 ----------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                             +GKE+HGY +R  L   VAVG+ LV+MYAKCG +  SR+VF 
Sbjct: 482 AITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFD 541

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIM 374
            +  +++++WN +I     +G   EA + F  M   G    N  + ++ L++C+  G + 
Sbjct: 542 RLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVD 601

Query: 375 LGQQI-HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ--VSWNSVIG 431
            G Q+ H      G++    +   ++ +   AG L     +   M   +Q   +W++++G
Sbjct: 602 RGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLG 661

Query: 432 A 432
           A
Sbjct: 662 A 662



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 14/278 (5%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K G A + F+ N L+++Y R+G    A ++F  +   + VSW  +++G   +G  
Sbjct: 401 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 460

Query: 68  NEACKMFKEMVR---AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            +A ++ +EM +    G + N   L ++L  C          G ++H   ++     D  
Sbjct: 461 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPA--RGKEIHGYAVRHALDTDVA 518

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V + L+ MY  C      +R +F+ +  R+ I+WN +I  Y   G       LF RM   
Sbjct: 519 VGSALVDMYAKC-GCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTAS 577

Query: 185 GFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           G     +PNE TF  +L   ++S ++     LQ   AM +  G+     + + +V    R
Sbjct: 578 G---EARPNEVTFMAALAACSHSGMVDRG--LQLFHAMERDHGVEPTPDILACVVDILGR 632

Query: 244 LGNFYYARKIFEQMI--QKNVVSMNGLMEGRRKGKEVH 279
            G    A  +   M   ++ V + + ++   R  + VH
Sbjct: 633 AGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVH 670



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   ++H    DV + + L+++Y + G LA +  +FD +P RN+++W  ++  Y   
Sbjct: 502 KEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMH 561

Query: 65  GMSNEACKMFKEMVRAG-FLLNRYALGSVLRACQECG 100
           G+  EA  +F  M  +G    N     + L AC   G
Sbjct: 562 GLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSG 598



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 73/343 (21%), Positives = 133/343 (38%), Gaps = 64/343 (18%)

Query: 552 MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL--EFDVVIGSALVDMYSKC 609
           M    Q+LDH      + + A++        +HA  +R  L       + +AL+  Y++C
Sbjct: 50  MASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARC 109

Query: 610 GRIDYASRFFDLM--PVRNVYSWNSMISGY----------------ARHGHGDKALTLFS 651
           GR+  A   F  +     +  S+NS+IS                     GH   + TL S
Sbjct: 110 GRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVS 169

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH------FKSMSQVY---GLIPQLEQ-- 700
            ++    LP     V  L   +HA  +  G  H      F ++  +Y   GL+   ++  
Sbjct: 170 VLRAVSHLPAAAAAV-RLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLF 228

Query: 701 ------------FSCMVDLLGRAGELDKIEEFINKM---PITPNSLIWRTVLGACCRANC 745
                       ++ MV +L ++G  D+  + +  M    + P+ + + + L AC R   
Sbjct: 229 AGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLEL 288

Query: 746 RKTELGRKAANMLFEMEPQNAVNYV--LLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
              ++GR+    + + +   A ++V   L +MYA+    E V KAR+         +   
Sbjct: 289 --LDVGREMHAYVIKDDELAANSFVASALVDMYAT---HEQVGKARQVFDMVPDSGKQLG 343

Query: 804 SWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVP 846
            W  M  G          + +  +  E L+   +   +AG+VP
Sbjct: 344 MWNAMICG----------YAQAGMDEEALRLFARMEAEAGFVP 376


>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
 gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/589 (38%), Positives = 351/589 (59%), Gaps = 10/589 (1%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M R G+   NF+    + +C+ L     G +IH + +K G  S V +SN+L+++Y     
Sbjct: 1   MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
                +VF  MP+ + VSW+++IGA    +    E    +  M   G  P+    +N +A
Sbjct: 61  YELSRQVFDEMPDKNAVSWSAIIGACLQDDR-CKEGFSLFRQMLSEGSRPSRGAILNAMA 119

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
              S         V+  V++  +  + ++++A    + +CG ++   K+F  +  + D V
Sbjct: 120 CVRSHEEAD---DVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSK-DLV 175

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           +W + I  Y+  ++  +A+ L+  MM +G   D  T   V+ AC+++A+ +    VH   
Sbjct: 176 TWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGII 235

Query: 588 VRACLEFDVV-IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
                   ++ + +AL+D+Y KCG + YA + FD M  RN+ +W++MISGY  HG G +A
Sbjct: 236 TTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREA 295

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           L LF QMK     PDH+TFV +LSACSH+GLV EG++ F SM++ +G+ P+ E ++CMVD
Sbjct: 296 LNLFDQMKASVK-PDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVD 354

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           +LGRAG+LD+  +FI +MP+ PN+ +W  +LGAC R +    +L    A  LF+++P NA
Sbjct: 355 ILGRAGKLDEACDFIERMPVRPNAAVWGALLGAC-RIHL-NVDLAEMVARALFDLDPHNA 412

Query: 767 VNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKD 826
             YV+L N+Y   GK ++    R  MK   VKK AG S + +K+ ++ FVAGD SHP+ D
Sbjct: 413 GRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTD 472

Query: 827 LIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPI 885
           LIY +L+ L  ++R  GY P   F L D++ E+KE ++  HSEK+A+ F +L       I
Sbjct: 473 LIYSELERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVI 532

Query: 886 RIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           RI KNLRVCGDCH+A KFISK+ GREIV+RD++RFHHF +G CSC DYW
Sbjct: 533 RIRKNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 184/378 (48%), Gaps = 15/378 (3%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G  +H  +++ G    V + N L+ MY KC   + SR VF  M  K++VSW+ +I    Q
Sbjct: 29  GIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSRQVFDEMPDKNAVSWSAIIGACLQ 88

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +   +E    F  M  +G   S  ++++ ++   S         ++   ++ GLD D SV
Sbjct: 89  DDRCKEGFSLFRQMLSEGSRPSRGAILNAMACVRSHEE---ADDVYRVVVENGLDFDQSV 145

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            +A   ++A  G +    K+F  +   D V+W + I A+  ++ +  EA+     M   G
Sbjct: 146 QSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKAD-MPLEALGLLKQMMLQG 204

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE-TTIENALLSCYGKCGEMDDC 513
             P+ +T + ++ A S+ +  +L H VH  +      N+   +E AL+  Y KCG +   
Sbjct: 205 IFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYA 264

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            K+F  M E R+ ++W++MISGY  +    +A+NL +  M+   + DH TF ++LSAC+ 
Sbjct: 265 RKVFDGMQE-RNIITWSAMISGYGMHGWGREALNL-FDQMKASVKPDHITFVSILSACSH 322

Query: 574 VATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVR-NVY 628
              +  G E   C      +F V       + +VD+  + G++D A  F + MPVR N  
Sbjct: 323 SGLVAEGWE---CFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAA 379

Query: 629 SWNSMISGYARHGHGDKA 646
            W +++     H + D A
Sbjct: 380 VWGALLGACRIHLNVDLA 397



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 166/346 (47%), Gaps = 41/346 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K G+   VF+ N+LI +Y +      + ++FDEMPD+N+VSW+ I+         
Sbjct: 33  HQDVVKFGYQSQVFISNSLITMYGKCDKYELSRQVFDEMPDKNAVSWSAIIGACLQDDRC 92

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            E   +F++M+  G   +R + G++L A   C  S  +    V+ +V+++   FD  V +
Sbjct: 93  KEGFSLFRQMLSEG---SRPSRGAILNA-MACVRS-HEEADDVYRVVVENGLDFDQSVQS 147

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
               M+  C    + AR++F+ I ++DL++W + I  Y +    +    L  +M  +G  
Sbjct: 148 AAAGMFARC-GRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQG-- 204

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD--LYVGSALVSGFARLG 245
             + P+  T   +I A   S L+ S+ L  I+  +   G   +  L V +AL+  + + G
Sbjct: 205 --IFPDAITLLGVIRAC--STLA-SFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCG 259

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
           +  YARK+F+ M ++N+++ + ++     G  +HG+            G   +N++ +  
Sbjct: 260 SLTYARKVFDGMQERNIITWSAMI----SGYGMHGW------------GREALNLFDQ-- 301

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
                    +  +  D +++ +++S    +G   E    F +M RD
Sbjct: 302 --------MKASVKPDHITFVSILSACSHSGLVAEGWECFNSMARD 339



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 186/428 (43%), Gaps = 65/428 (15%)

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
           M+R G   + +    +++AC  C    F+FG+++H  V+K        +SN LI MYG C
Sbjct: 1   MLRLGIQPDNFTFPFIIKACS-C-LRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKC 58

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
            +  + +R++F+E+  ++ +SW++II    Q       F LF +M  EG R S       
Sbjct: 59  -DKYELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSR------ 111

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
            G+++ A   + +        +  +V + GL  D  V SA    FAR G    ARK+F+ 
Sbjct: 112 -GAILNAM--ACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDG 168

Query: 257 MIQKNVVSMNGLMEGRRKGKE--------------------------------------- 277
           ++ K++V+    +E   K                                          
Sbjct: 169 IMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLA 228

Query: 278 --VHGYLIRSGLF--DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
             VHG +I +G F   ++AV   L+++Y KCG++  +R VF  M  ++ ++W+ MISG  
Sbjct: 229 HIVHG-IITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYG 287

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IHGEGLKLGLDSDV 392
            +G   EA+  F  M+   +   + + +S LS+C+  G +  G +  +      G+    
Sbjct: 288 MHGWGREALNLFDQMKA-SVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRP 346

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGAF-----ADSEALVSEAVKY 446
                ++ +   AG L         MP     + W +++GA       D   +V+ A+ +
Sbjct: 347 EHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARAL-F 405

Query: 447 YLDMRRAG 454
            LD   AG
Sbjct: 406 DLDPHNAG 413



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 87/390 (22%), Positives = 174/390 (44%), Gaps = 48/390 (12%)

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
            R  ++P+ +TF  +I A   S L       +I   V K G  S +++ ++L++ + +  
Sbjct: 2   LRLGIQPDNFTFPFIIKAC--SCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCD 59

Query: 246 NFYYARKIFEQMIQKNVVSMNGLM---------------------EGRRKGK-------- 276
            +  +R++F++M  KN VS + ++                     EG R  +        
Sbjct: 60  KYELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMA 119

Query: 277 ---------EVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                    +V+  ++ +GL FD  +V +    M+A+CG ++ +R +F  ++ KD V+W 
Sbjct: 120 CVRSHEEADDVYRVVVENGLDFDQ-SVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWA 178

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
           T I    +     EA+     M   G+     +L+  + +C++L    L   +HG  +  
Sbjct: 179 TTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGI-ITT 237

Query: 387 GL--DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           G   +  ++V  AL+ LY   G L+   KVF  M E + ++W+++I  +        EA+
Sbjct: 238 GFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYG-MHGWGREAL 296

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSC 503
             + D  +A   P+ +TF++IL+A S   +   G +    + + + V         ++  
Sbjct: 297 NLF-DQMKASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDI 355

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            G+ G++D+      RM  R +   W +++
Sbjct: 356 LGRAGKLDEACDFIERMPVRPNAAVWGALL 385


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/727 (33%), Positives = 392/727 (53%), Gaps = 46/727 (6%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------R 272
           DL+  + L++ + +LG    AR++F++M ++N+VS   L++                  R
Sbjct: 95  DLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLR 154

Query: 273 RKGKEVHGYLIRSGLFDMVA------------------------VGNGLVNMYAKCGTID 308
            +G EV+ +++ + L   +A                        VG+GL++ Y+ C  + 
Sbjct: 155 WEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVS 214

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
           D+  VF  ++ KD+V W  M+S   +N C E A   F  MR  G   + F+L S L +  
Sbjct: 215 DAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAV 274

Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
            L  ++LG+ IHG  +K   D++  V  ALL +YA  G +      F ++P  D +  + 
Sbjct: 275 CLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSF 334

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
           +I  +A S     +A + +L + R+   PN  +  ++L A ++      G Q+H   IK 
Sbjct: 335 MISRYAQSNQ-NEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKI 393

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNL 548
              ++  + NAL+  Y KC +MD   KIF+ + +  +EVSWN+++ G+  + L  +A+++
Sbjct: 394 GHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDA-NEVSWNTIVVGFSQSGLGEEALSV 452

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
              M          T+++VL ACAS A++    ++H    ++    D VIG++L+D Y+K
Sbjct: 453 FCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAK 512

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
           CG I  A + F  +  R++ SWN++ISGYA HG    AL LF +M       + +TFV +
Sbjct: 513 CGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVAL 572

Query: 669 LSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITP 728
           LS CS  GLV+ G   F SM   +G+ P +E ++C+V LLGRAG L+   +FI  +P  P
Sbjct: 573 LSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAP 632

Query: 729 NSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKA 788
           ++++WR +L +C     +   LGR +A  + E+EPQ+   YVLL+NMYA+ G  + VA  
Sbjct: 633 SAMVWRALLSSCIIH--KNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALL 690

Query: 789 RKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQT 848
           RK+M+   V+K  G SWV +K  +H F  G   HP+  +I   L+ LN K    GY+P  
Sbjct: 691 RKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDI 750

Query: 849 KFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKI 907
              L D++ E K  ++  HSE++A+A+ L       PIRI+KNLR C DCH+AF  ISKI
Sbjct: 751 NVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKI 810

Query: 908 VGREIVL 914
           V REI++
Sbjct: 811 VKREIIV 817



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 150/581 (25%), Positives = 269/581 (46%), Gaps = 54/581 (9%)

Query: 1   SKDAKLFHLQILKHGFA--YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIV 58
           ++  +  H  +++ G     D+F  N L+N+Y ++G LASA +LFD MP+RN VS+  +V
Sbjct: 75  ARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLV 134

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
             +  +G    A  +F+ +   G  +N++ L ++L+       +G   G  VH    K  
Sbjct: 135 QAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGG--VHSCAWKLG 192

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              +  V + LI  Y  C   +D A  +F  I  +D + W +++S YS+     + F++F
Sbjct: 193 HDHNAFVGSGLIDAYSLCSLVSD-AEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVF 251

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           S+M+  G     KPN +   S++ AA    L    L + I     K    ++ +VG AL+
Sbjct: 252 SKMRVSG----CKPNPFALTSVLKAAV--CLPSVVLGKGIHGCAIKTLNDTEPHVGGALL 305

Query: 239 SGFARLGNFYYARKIFEQMIQKNVV----------------------------------- 263
             +A+ G+   AR  FE +   +V+                                   
Sbjct: 306 DMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEY 365

Query: 264 SMNGLMEGRRK------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
           S++ +++          GK++H + I+ G    + VGN L++ YAKC  +D S  +F  +
Sbjct: 366 SLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 425

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
              + VSWNT++ G  Q+G  EEA+  FC M+   +  +  +  S L +CAS   I    
Sbjct: 426 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG 485

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           QIH    K   ++D  + N+L+  YA  GY+   LKVF  + E D +SWN++I  +A   
Sbjct: 486 QIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYA-LH 544

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-IKYNVANETTI 496
              ++A++ +  M ++    N +TF+ +L+  SS  +   G  +   + I + +      
Sbjct: 545 GQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEH 604

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI 537
              ++   G+ G ++D  +    +      + W +++S  I
Sbjct: 605 YTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCI 645


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/676 (37%), Positives = 386/676 (57%), Gaps = 18/676 (2%)

Query: 273 RKGKEVHGYLIRSGLFD--MVAVGNGLVNMYAKCGTIDDSRSVFRFMI-GK-DSVSWNTM 328
           R G+E H + +++GL         N L++MYA+ G + D++ +F     G+ D V+WNTM
Sbjct: 183 RLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTM 242

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG- 387
           +S L Q+G ++EA+     M   G+     +  S L +C+ L  + +G+++H   +K   
Sbjct: 243 VSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDE 302

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV--SWNSVIGAFADSEALVSEAVK 445
           L ++  V++AL+ +YA    + +  +VF ++P+  +    WN++I  +A +  +  EA++
Sbjct: 303 LAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQA-GMDEEALR 361

Query: 446 YYLDMR-RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
            +  M   AG+ P   T  ++L A +          VH  V+K  +A    ++NAL+  Y
Sbjct: 362 LFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMY 421

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR---GQRLDH 561
            + G+ D   +IFA M +  D VSWN++I+G +    +  A  L   M Q    G   + 
Sbjct: 422 ARLGKTDVARRIFA-MVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNA 480

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
            T  T+L  CA +A   RG E+H   VR  L+ DV +GSALVDMY+KCG +  +   FD 
Sbjct: 481 ITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDR 540

Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDE 680
           +P RN  +WN +I  Y  HG G +A  LF +M   G   P+ VTF+  L+ACSH+G+VD 
Sbjct: 541 LPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDR 600

Query: 681 GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL-IWRTVLGA 739
           G + F +M + +G+ P  +  +C+VD+LGRAG LD+    +  M      +  W T+LGA
Sbjct: 601 GLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGA 660

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKK 799
           C R + R   LG  A   L E+EP+ A +YVLL N+Y++ G+W   A+ R  M+   V K
Sbjct: 661 C-RLH-RNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAK 718

Query: 800 EAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES 859
           E GCSW+ +   +H F+AG+ +HP  + ++  ++ L  +M   GY P T   L D++   
Sbjct: 719 EPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGD 778

Query: 860 KEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSN 918
           K  ++  HSEK+A+AF L R +    IR+ KNLRVC DCH A KF+SK+VGREIVLRD  
Sbjct: 779 KAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVR 838

Query: 919 RFHHFNDGKCSCGDYW 934
           RFHHF +G+CSCGDYW
Sbjct: 839 RFHHFRNGQCSCGDYW 854



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 234/485 (48%), Gaps = 21/485 (4%)

Query: 273 RKGKEVHGYLIRSGLF--DMVAVGNGLVNMYAKCGTIDDSRSVFRFMI--GKDSVSWNTM 328
           R  + +H   +R GL      AV N L+  YA+CG +  +  VF  +     D+VS+N++
Sbjct: 74  RSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSL 133

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL----GWIMLGQQIHGEGL 384
           IS L     ++ A+    AM   G   ++F+L+S L + + L      + LG++ H   L
Sbjct: 134 ISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFAL 193

Query: 385 KLGL--DSDVSVSNALLSLYADAGYLSRCLKVFF-LMP-EHDQVSWNSVIGAFADSEALV 440
           K GL         NALLS+YA  G ++   ++F    P   D V+WN+++     S  + 
Sbjct: 194 KNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQS-GMF 252

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN-VANETTIENA 499
            EAV+   DM   G  P+GVTF + L A S   +  +G ++HA VIK + +A  + + +A
Sbjct: 253 DEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASA 312

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVS-WNSMISGYIHNELLPKAMNLVWFM-MQRGQ 557
           L+  Y    ++    ++F  + +   ++  WN+MI GY    +  +A+ L   M  + G 
Sbjct: 313 LVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGF 372

Query: 558 RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
                T A+VL ACA          VH   V+  +  +  + +AL+DMY++ G+ D A R
Sbjct: 373 VPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARR 432

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTL---FSQMKLDGPLPDHVTFVGVLSACSH 674
            F ++ + +V SWN++I+G    GH   A  L     Q++  G +P+ +T + +L  C+ 
Sbjct: 433 IFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAI 492

Query: 675 AGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWR 734
                 G K     +  + L   +   S +VD+  + G L       +++P   N++ W 
Sbjct: 493 LAAPARG-KEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP-RRNTITWN 550

Query: 735 TVLGA 739
            ++ A
Sbjct: 551 VLIMA 555



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 220/481 (45%), Gaps = 65/481 (13%)

Query: 8   HLQILKHGF--AYDVFLCNTLINVYVRVGDLASASKLF-DEMPDR-NSVSWACIVSGYTH 63
           H   LK+G    +  F  N L+++Y R+G +A A +LF    P R + V+W  +VS    
Sbjct: 189 HAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQ 248

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-TFD 122
            GM +EA +   +MV  G   +     S L AC          G ++H  V+K ++   +
Sbjct: 249 SGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRL--ELLDVGREMHAYVIKDDELAAN 306

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIET--RDLISWNSIISVYSQRGDTISVFKLFSR 180
             V++ L+ MY +  E    AR++F+ +    + L  WN++I  Y+Q G      +LF+R
Sbjct: 307 SFVASALVDMYAT-HEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFAR 365

Query: 181 MQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           M+ E       P E T  S++ A A S   +G    + +   V K G+  + +V +AL+ 
Sbjct: 366 MEAEA---GFVPCETTMASVLPACARSEAFAGK---EAVHGYVVKRGMAGNRFVQNALMD 419

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------------------------- 271
            +ARLG    AR+IF  +   +VVS N L+ G                            
Sbjct: 420 MYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPN 479

Query: 272 ----------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                             +GKE+HGY +R  L   VAVG+ LV+MYAKCG +  SR+VF 
Sbjct: 480 AITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFD 539

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIM 374
            +  +++++WN +I     +G   EA + F  M   G    N  + ++ L++C+  G + 
Sbjct: 540 RLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVD 599

Query: 375 LGQQI-HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ--VSWNSVIG 431
            G Q+ H      G++    +   ++ +   AG L     +   M   +Q   +W++++G
Sbjct: 600 RGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLG 659

Query: 432 A 432
           A
Sbjct: 660 A 660



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 14/278 (5%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K G A + F+ N L+++Y R+G    A ++F  +   + VSW  +++G   +G  
Sbjct: 399 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 458

Query: 68  NEACKMFKEMVR---AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            +A ++ +EM +    G + N   L ++L  C          G ++H   ++     D  
Sbjct: 459 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPA--RGKEIHGYAVRHALDTDVA 516

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V + L+ MY  C      +R +F+ +  R+ I+WN +I  Y   G       LF RM   
Sbjct: 517 VGSALVDMYAKC-GCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTAS 575

Query: 185 GFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           G     +PNE TF  +L   ++S ++     LQ   AM +  G+     + + +V    R
Sbjct: 576 G---EARPNEVTFMAALAACSHSGMVDRG--LQLFHAMERDHGVEPTPDILACVVDILGR 630

Query: 244 LGNFYYARKIFEQMI--QKNVVSMNGLMEGRRKGKEVH 279
            G    A  +   M   ++ V + + ++   R  + VH
Sbjct: 631 AGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVH 668



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   ++H    DV + + L+++Y + G LA +  +FD +P RN+++W  ++  Y   
Sbjct: 500 KEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMH 559

Query: 65  GMSNEACKMFKEMVRAG-FLLNRYALGSVLRACQECG 100
           G+  EA  +F  M  +G    N     + L AC   G
Sbjct: 560 GLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSG 596



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 73/343 (21%), Positives = 133/343 (38%), Gaps = 64/343 (18%)

Query: 552 MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL--EFDVVIGSALVDMYSKC 609
           M    Q+LDH      + + A++        +HA  +R  L       + +AL+  Y++C
Sbjct: 48  MASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARC 107

Query: 610 GRIDYASRFFDLM--PVRNVYSWNSMISGY----------------ARHGHGDKALTLFS 651
           GR+  A   F  +     +  S+NS+IS                     GH   + TL S
Sbjct: 108 GRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVS 167

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH------FKSMSQVY---GLIPQLEQ-- 700
            ++    LP     V  L   +HA  +  G  H      F ++  +Y   GL+   ++  
Sbjct: 168 VLRAVSHLPAAAAAV-RLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLF 226

Query: 701 ------------FSCMVDLLGRAGELDKIEEFINKM---PITPNSLIWRTVLGACCRANC 745
                       ++ MV +L ++G  D+  + +  M    + P+ + + + L AC R   
Sbjct: 227 AGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLEL 286

Query: 746 RKTELGRKAANMLFEMEPQNAVNYV--LLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
              ++GR+    + + +   A ++V   L +MYA+    E V KAR+         +   
Sbjct: 287 --LDVGREMHAYVIKDDELAANSFVASALVDMYAT---HEQVGKARQVFDMVPDSGKQLG 341

Query: 804 SWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVP 846
            W  M  G          + +  +  E L+   +   +AG+VP
Sbjct: 342 MWNAMICG----------YAQAGMDEEALRLFARMEAEAGFVP 374


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 256/767 (33%), Positives = 414/767 (53%), Gaps = 36/767 (4%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G Q H  ++ +       V+N LI MY  C      A ++F+ +  RD +SWN+++  Y+
Sbjct: 61  GKQAHARMILTEFKPTVFVTNCLIQMYIKC-SDLGFAFKVFDGMPQRDTVSWNAMLFGYA 119

Query: 167 QRGDTISVFKLFSRMQREGF-----------RYSLKPNEYTFGSLITAAYSSVLSGSYLL 215
            RGD     KLF  M   G            R     +  TF  ++ +  S    G  + 
Sbjct: 120 GRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGI- 178

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARL----GNFYYARKIFEQMIQKNVVSMNGLMEG 271
            QI  +  K G   D+  GSAL+  +A+      +     ++F++M +  V ++      
Sbjct: 179 -QIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGAL------ 231

Query: 272 RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD-SRSVFRFMIGKDSVSWNTMIS 330
                ++HG+ +++     V +G   ++MY KC  + D S  +F  +   +  S+N +I 
Sbjct: 232 -----QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIV 286

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           G  ++    EA+  F  +++ GL     SL     +CA +   + G Q+HG  +K    S
Sbjct: 287 GYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQS 346

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           ++ V+NA+L +Y   G L     VF  M   D VSWN++I A  +      + +  ++ M
Sbjct: 347 NICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAH-EQNGNEEKTLSLFVWM 405

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
            ++G  P+  T+ ++L A + +     G ++H ++IK  +  ++ +  AL+  Y KCG M
Sbjct: 406 LQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMM 465

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
           +  EK+  R++E+   VSWN++ISG+   +   +A      M++ G   D+FT+AT+L  
Sbjct: 466 EKAEKLHDRLAEQT-VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDT 524

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
           CA++ T+E G ++HA  ++  L+ D  I S LVDMYSKCG +      F+  P R+  +W
Sbjct: 525 CANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTW 584

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           N+M+ GYA+HG G++AL +F  M+L+   P+H TF+ VL AC H GLV++G  +F SM  
Sbjct: 585 NAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLS 644

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTE 749
            YGL PQLE +SC+VD++GR+G++ K  E I  MP   +++IWRT+L  C    N    E
Sbjct: 645 NYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGN---VE 701

Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMK 809
           +  KAA  + ++EP+++  YVLL+N+YA+ G W +V K RK M+   +KKE GCSW+ +K
Sbjct: 702 VAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIK 761

Query: 810 DGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLE 856
             VH F+ GD++HP    IYE L  L  +M+  GY+P T F L D E
Sbjct: 762 SEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFILNDDE 808



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 150/641 (23%), Positives = 265/641 (41%), Gaps = 119/641 (18%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H +++   F   VF+ N LI +Y++  DL  A K+FD MP R++VSW  ++ GY  
Sbjct: 61  GKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAG 120

Query: 64  KGMSNEACKMFKEMV---------------RAGFLLNRYALGSVLRACQECGPSGFKFGM 108
           +G    A K+F  M                R G + +R     VL++C      G   G+
Sbjct: 121 RGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHG--GGI 178

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD--------------------------- 141
           Q+H L +K     D +  + L+ MY  C    D                           
Sbjct: 179 QIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHAL 238

Query: 142 --------------------------CARRIFEEIETRDLISWNSIISVYSQRGDTISVF 175
                                     C+ ++F  +   +L S+N+II  Y++    I   
Sbjct: 239 KTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEAL 298

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS 235
            +F  +Q+ G    L  +E +      A   +V+ G     Q+  +  K+   S++ V +
Sbjct: 299 GMFRLLQKSG----LGLDEVSLSGAXRAC--AVIKGDLEGLQVHGLSMKSLCQSNICVAN 352

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK--------------------- 274
           A++  + + G    A  +FE+M+ ++ VS N ++    +                     
Sbjct: 353 AILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEP 412

Query: 275 --------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                               G E+H  +I+S +     VG  L++MY+KCG ++ +  + 
Sbjct: 413 DEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLH 472

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             +  +  VSWN +ISG       EEA   F  M   G+   NF+  + L +CA+L  + 
Sbjct: 473 DRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVE 532

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
           LG+QIH + +K  L SD  +S+ L+ +Y+  G +     +F   P  D V+WN+++  +A
Sbjct: 533 LGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYA 592

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANE 493
               L  EA+K +  M+     PN  TF+ +L A     + + G H  H+ +  Y +  +
Sbjct: 593 -QHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQ 651

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
               + ++   G+ G++    ++   M    D V W +++S
Sbjct: 652 LEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 692



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 115/526 (21%), Positives = 204/526 (38%), Gaps = 111/526 (21%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
              C+    +  G+Q H   +       V V+N L+ +Y     L    KVF  MP+ D 
Sbjct: 49  FQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDT 108

Query: 424 VSWNSVIGAFA------------DSEALVSEAVKYYLDMR--RAGWSPNGVTFINILAAA 469
           VSWN+++  +A            D+       V    D R  R G   +  TF  +L + 
Sbjct: 109 VSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSC 168

Query: 470 SSFSMGKLGHQVH----------------------------------------------- 482
           SS      G Q+H                                               
Sbjct: 169 SSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGV 228

Query: 483 ------AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY 536
                    +K +   +  I  A L  Y KC  + DC           +  S+N++I GY
Sbjct: 229 GALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGY 288

Query: 537 IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
             ++   +A+ +   + + G  LD  + +    ACA +     G++VH   +++  + ++
Sbjct: 289 ARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNI 348

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
            + +A++DMY KCG +  A   F+ M  R+  SWN++I+ + ++G+ +K L+LF  M   
Sbjct: 349 CVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQS 408

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYGLIPQLEQFS--CMVDLLGRAGE 713
           G  PD  T+  VL AC+    ++ G + H + +    G    L+ F    ++D+  + G 
Sbjct: 409 GMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMG----LDSFVGIALIDMYSKCGM 464

Query: 714 LDKIEEFINK----------------------------------MPITPNSLIWRTVLGA 739
           ++K E+  ++                                  M + P++  + T+L  
Sbjct: 465 MEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDT 524

Query: 740 CCRANCRKTELGRKAANMLFEMEPQ-NAVNYVLLANMYASGGKWED 784
           C  AN    ELG++    + + E Q +A     L +MY+  G  +D
Sbjct: 525 C--ANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQD 568



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 79/164 (48%), Gaps = 16/164 (9%)

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           TF +I    S       G Q HA++I         + N L+  Y KC ++    K+F  M
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103

Query: 521 SERRDEVSWNSMISGYIHN----------ELLPKA----MNLVWFMMQR-GQRLDHFTFA 565
            + RD VSWN+M+ GY             + +P      + L  F M R G   D  TFA
Sbjct: 104 PQ-RDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFA 162

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
            VL +C+S+     G+++H   V+   + DVV GSAL+DMY+KC
Sbjct: 163 VVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKC 206



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 15/126 (11%)

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           TF+ +   C+    L  G + HA  +    +  V + + L+ MY KC  + +A + FD M
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMK---------LD------GPLPDHVTFVG 667
           P R+  SWN+M+ GYA  G    A  LF  M           D      G + D  TF  
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163

Query: 668 VLSACS 673
           VL +CS
Sbjct: 164 VLKSCS 169


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 248/661 (37%), Positives = 379/661 (57%), Gaps = 42/661 (6%)

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           SVF  +   + + WNTM+ G   +     A+  +  M   G + +++S    L SCA   
Sbjct: 19  SVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSK 78

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA------------DA-------------- 405
               G+QIH + LKLG   D  V  +L+S+YA            DA              
Sbjct: 79  AFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALIT 138

Query: 406 GYLSR-----CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           GY SR       KVF  + E D VSWN++I  + ++     EA++ + +M R    P+  
Sbjct: 139 GYASRGDFRSARKVFDEITERDVVSWNAMITGYVEN-GRYEEALELFKEMMRTNVRPDEG 197

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIK----YNVANETTIENALLSCYGKCGEMDDCEKI 516
           T +++++A +     +LG QVH+ V      +  ++   I NAL+  Y KCG+++    +
Sbjct: 198 TLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGL 257

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F  +S  +D VSWN++I GY H  L  +A+ L   M++ G+  +  T  +VL ACA +  
Sbjct: 258 FEGLS-CKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGA 316

Query: 577 LERGMEVHACGVRAC--LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
           ++ G  +H    +    +  +  + ++L+DMY+KCG I+ A + F+ M  R++ SWN+MI
Sbjct: 317 IDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMI 376

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
            G+A HG  + A  LFS+M+ +   PD +TFVG+LSACSH+GL+D G + FKSM+Q Y L
Sbjct: 377 FGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNL 436

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
            P+LE + CM+DLLG +G   + EE I+ MP+ P+ +IW ++L AC +      EL    
Sbjct: 437 TPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHG--NLELAESF 494

Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
           A  L ++EP+N+ +YVLL+N+YA+ G+WEDVA+ R  +    +KK  GCS + +   VH 
Sbjct: 495 AQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHE 554

Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVA 874
           F+ GD+ HP +  IY  L+E++ ++ +AG+ P T   L ++E E KE  + +HSEK+A+A
Sbjct: 555 FIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLAIA 614

Query: 875 F-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
           F +++      + I+KNLRVC +CH A K ISKI  REIV RD  RFHHF DG CSC DY
Sbjct: 615 FGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDY 674

Query: 934 W 934
           W
Sbjct: 675 W 675



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 115/466 (24%), Positives = 212/466 (45%), Gaps = 84/466 (18%)

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA- 204
           +FE I+  +L+ WN+++  ++   D +S  +++ RM   G      PN Y+F  L+ +  
Sbjct: 20  VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHL----PNSYSFPFLLKSCA 75

Query: 205 -----------YSSVLS-----GSYLLQQILAMVKKAGLLSD------------LYVGSA 236
                      ++ VL        Y+   +++M  + G L D            +   +A
Sbjct: 76  KSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTA 135

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---------------------- 274
           L++G+A  G+F  ARK+F+++ +++VVS N ++ G  +                      
Sbjct: 136 LITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPD 195

Query: 275 -------------------GKEVHGYLIRS----GLFDMVAVGNGLVNMYAKCGTIDDSR 311
                              G++VH ++       G    + + N L+++Y+KCG ++ + 
Sbjct: 196 EGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAF 255

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
            +F  +  KD VSWNT+I G      Y+EA++ F  M R G   ++ +L+S L +CA LG
Sbjct: 256 GLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLG 315

Query: 372 WIMLGQQIH---GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
            I +G+ IH    + LK G+ ++ S+  +L+ +YA  G +    +VF  M      SWN+
Sbjct: 316 AIDIGRWIHVYIDKKLK-GVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNA 374

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK- 487
           +I  FA      + A   +  MR     P+ +TF+ +L+A S   +  LG Q+   + + 
Sbjct: 375 MIFGFA-MHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQD 433

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           YN+  +      ++   G  G   + E++   M    D V W S++
Sbjct: 434 YNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLL 479



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 197/474 (41%), Gaps = 83/474 (17%)

Query: 36  LASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRA 95
           L  A  +F+ + + N + W  ++ G+        A +M+  MV  G L N Y+   +L++
Sbjct: 14  LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG---------------SCLEST 140
           C +     F+ G Q+H  VLK     D  V   LI+MY                S  +  
Sbjct: 74  CAK--SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVV 131

Query: 141 DC---------------ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
            C               AR++F+EI  RD++SWN++I+ Y + G      +LF  M R  
Sbjct: 132 SCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTN 191

Query: 186 FRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            R    P+E T  S+++A     S+  G  +   +       G  S L + +AL+  +++
Sbjct: 192 VR----PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSK 247

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------------------------- 274
            G+   A  +FE +  K+VVS N L+ G                                
Sbjct: 248 CGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSV 307

Query: 275 ------------GKEVHGYLIR--SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                       G+ +H Y+ +   G+ +  ++   L++MYAKCG I+ +  VF  M+ +
Sbjct: 308 LPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYR 367

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
              SWN MI G   +G    A   F  MR + +   + + +  LS+C+  G + LG+QI 
Sbjct: 368 SLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIF 427

Query: 381 GEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
               +   L   +     ++ L   +G      ++   MP E D V W S++ A
Sbjct: 428 KSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKA 481



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 141/565 (24%), Positives = 246/565 (43%), Gaps = 74/565 (13%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV  C  LI  Y   GD  SA K+FDE+ +R+ VSW  +++GY   G   EA ++FKEM+
Sbjct: 129 DVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMM 188

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS-----NVLIAMY 133
           R     +   L SV+ AC + G    + G QVH  V   +    G  S     N LI +Y
Sbjct: 189 RTNVRPDEGTLVSVVSACAQSG--SIELGRQVHSWVDDDDDDH-GFSSSLKIVNALIDLY 245

Query: 134 GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPN 193
             C +  + A  +FE +  +D++SWN++I  Y+          LF  M R G      PN
Sbjct: 246 SKCGD-VETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSG----ECPN 300

Query: 194 EYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           + T  S++ A     ++  G ++   I   +K  G+ ++  + ++L+  +A+ G+   A 
Sbjct: 301 DVTLLSVLPACAHLGAIDIGRWIHVYIDKKLK--GVTNETSLRTSLIDMYAKCGDIEAAH 358

Query: 252 KIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA--VGN----------GLVN 299
           ++F  M+ +++ S N ++     G  +HG    +  FD+ +   GN          GL++
Sbjct: 359 QVFNSMLYRSLSSWNAMI----FGFAMHGRA--NAAFDLFSRMRGNRVEPDDITFVGLLS 412

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEA--IMNFCAMRRDG 352
             +  G +D  R +F+ M    +++     +  MI  L  +G ++EA  +++   M  DG
Sbjct: 413 ACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDG 472

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRC 411
           ++       S L +C   G + L +    + +K  ++ + S S  LLS +YA AG     
Sbjct: 473 VI-----WCSLLKACKKHGNLELAESFAQKLIK--IEPENSGSYVLLSNIYATAGRWEDV 525

Query: 412 LKVFFLM--------PEHDQVSWNSVIGAFADSEALVSEAVKYY-------LDMRRAGWS 456
            +V  ++        P    +  +SV+  F   + L     + Y       + +  AG++
Sbjct: 526 ARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFA 585

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV-----ANETTIENALLSCYGKCGEMD 511
           P+    +  +     +  G L H      I + +       + TI   L  C   C E  
Sbjct: 586 PDTSEVLQEM--EEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCR-NCHEAT 642

Query: 512 D-CEKIFARMSERRDEVSWNSMISG 535
               KI+ R    RD   ++    G
Sbjct: 643 KLISKIYKREIVARDRTRFHHFRDG 667



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 156/321 (48%), Gaps = 28/321 (8%)

Query: 14  HGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKM 73
           HGF+  + + N LI++Y + GD+ +A  LF+ +  ++ VSW  ++ GYTH  +  EA  +
Sbjct: 229 HGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLL 288

Query: 74  FKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ--TFDGLVSNVLIA 131
           F+EM+R+G   N   L SVL AC   G      G  +H  + K  +  T +  +   LI 
Sbjct: 289 FQEMLRSGECPNDVTLLSVLPACAHLG--AIDIGRWIHVYIDKKLKGVTNETSLRTSLID 346

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY  C +  + A ++F  +  R L SWN++I  ++  G   + F LFSRM+  G R  ++
Sbjct: 347 MYAKCGD-IEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMR--GNR--VE 401

Query: 192 PNEYTFGSLITA-AYSSVLSGSYLLQQIL-AMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
           P++ TF  L++A ++S +L    L +QI  +M +   L   L     ++      G F  
Sbjct: 402 PDDITFVGLLSACSHSGLLD---LGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKE 458

Query: 250 ARKIFEQM-IQKNVVSMNGLMEGRRKGKEVHGYL-----IRSGLFDMVAVGNG----LVN 299
           A ++   M ++ + V    L++  +K    HG L         L  +    +G    L N
Sbjct: 459 AEEMIHTMPMEPDGVIWCSLLKACKK----HGNLELAESFAQKLIKIEPENSGSYVLLSN 514

Query: 300 MYAKCGTIDDSRSVFRFMIGK 320
           +YA  G  +D   V   + GK
Sbjct: 515 IYATAGRWEDVARVRGVLNGK 535



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 40/193 (20%), Positives = 84/193 (43%), Gaps = 11/193 (5%)

Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
           + YA   F+ +   N+  WN+M+ G+A       AL ++ +M   G LP+  +F  +L +
Sbjct: 14  LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73

Query: 672 CSHAGLVDEGFKHFKSMSQVYGLIPQLEQF--SCMVDLLGRAGELDKIEEFINKMPITPN 729
           C+ +   +EG    +  +QV  L   L+++  + ++ +  R G L+   +  +       
Sbjct: 74  CAKSKAFEEG---RQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDV 130

Query: 730 SLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKAR 789
                 + G   R +       R A  +  E+  ++ V++  +   Y   G++E+  +  
Sbjct: 131 VSCTALITGYASRGDF------RSARKVFDEITERDVVSWNAMITGYVENGRYEEALELF 184

Query: 790 KAMKEAEVKKEAG 802
           K M    V+ + G
Sbjct: 185 KEMMRTNVRPDEG 197


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/706 (34%), Positives = 367/706 (51%), Gaps = 36/706 (5%)

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM--YAKCGTIDDSRSVFRFMIG 319
           ++S+    E   + ++VH   I+ GL     + N ++      + G    +R +F  +  
Sbjct: 42  LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 101

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
            +   WNTMI G  +    +  +  +  M R G+    ++             +  G+Q+
Sbjct: 102 PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQL 161

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           HG  LK GL  +V V  AL+ +Y   G L     VF + P+ D ++WN +I A+ +    
Sbjct: 162 HGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAY-NKVGK 220

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
             E+ + +L M      P  VT + +L+A S     + G +VH+ V    V +   +ENA
Sbjct: 221 FEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENA 280

Query: 500 LLSCYGKCGEMDDCEKIFARMSER------------------------------RDEVSW 529
           ++  Y  CGEMD    IF  M+ R                              +D VSW
Sbjct: 281 MIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSW 340

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
            +MI GYI +    +A+ L   M     + D FT  +VL+ACA +  LE G  +     R
Sbjct: 341 TAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDR 400

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
             ++ D+ + +AL+DMY KCG +D A   F  M  R+ ++W +MI G A +GHG+KAL +
Sbjct: 401 NKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDM 460

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           FS M     LPD +T++GVLSAC+H GLVD+G K+F  M+  +G+ P +  + C+VDLL 
Sbjct: 461 FSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLA 520

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
           RAG L +  E I  MPI  NS++W  +L  C     R++++       + E+EP N   Y
Sbjct: 521 RAGRLKEAYEVIENMPIKANSIVWGALLAGC--RVYRESDMAEMVVKQILELEPDNGAVY 578

Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIY 829
           VLL N+YA+  +W D+ + R+ M +  +KK  GCS + M   VH FVAGD SHP+   I 
Sbjct: 579 VLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNID 638

Query: 830 EKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIM 888
            KL ++ Q ++ AGY P       D+  E KE+ V  HSEK+A+AF L  +   + IRI 
Sbjct: 639 AKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRIT 698

Query: 889 KNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           KNLR+C DCH+  K +SK+  RE+++RD  RFHHF  G CSC DYW
Sbjct: 699 KNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 148/607 (24%), Positives = 262/607 (43%), Gaps = 118/607 (19%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAM-----YGSCLESTDCARRIFEEIETRDLISWNSIIS 163
           QVHC  +K     + ++ N ++       YG        ARR+F+EI   +L  WN++I 
Sbjct: 57  QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGD----FQYARRLFDEIPEPNLFIWNTMI- 111

Query: 164 VYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVK 223
               RG        +SR+               F  L  + Y  +L              
Sbjct: 112 ----RG--------YSRLD--------------FPQLGVSLYLEML-------------- 131

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLI 283
           + G+  D Y    L  GF R     Y                         G+++HG+++
Sbjct: 132 RRGVKPDRYTFPFLFKGFTRDIALEY-------------------------GRQLHGHVL 166

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
           + GL   V V   LV MY  CG +D +R VF      D ++WN +IS  ++ G +EE+  
Sbjct: 167 KHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRR 226

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            F  M    ++ +  +L+  LS+C+ L  +  G+++H       ++S++ + NA++ +YA
Sbjct: 227 LFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYA 286

Query: 404 DAGYLSRCLKVFF-------------------------------LMPEHDQVSWNSVIGA 432
           D G +   L +F                                 MPE D VSW ++I  
Sbjct: 287 DCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDG 346

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN 492
           +  S     EA++ + +M+     P+  T +++L A +     +LG  +   + +  + N
Sbjct: 347 YIRSNRF-KEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKN 405

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
           +  + NAL+  Y KCG++D  E IF  MS+ RD+ +W +MI G   N    KA+++   M
Sbjct: 406 DLFVRNALIDMYFKCGDVDKAESIFREMSQ-RDKFTWTAMIVGLAVNGHGEKALDMFSNM 464

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVH-ACGVRACLEFDVVIGSALVDMYSKCGR 611
           ++     D  T+  VLSAC     +++G +       +  +E ++     LVD+ ++ GR
Sbjct: 465 LKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGR 524

Query: 612 IDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKALTLFSQ-MKLDGPLPD----HVTF 665
           +  A    + MP++ N   W ++++G   +   D A  +  Q ++L+   PD    +V  
Sbjct: 525 LKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE---PDNGAVYVLL 581

Query: 666 VGVLSAC 672
             + +AC
Sbjct: 582 CNIYAAC 588



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 124/531 (23%), Positives = 239/531 (45%), Gaps = 42/531 (7%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYV--RVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           H Q +K G   +  L N ++        GD   A +LFDE+P+ N   W  ++ GY+   
Sbjct: 59  HCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLD 118

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
                  ++ EM+R G   +RY    + +          ++G Q+H  VLK    ++  V
Sbjct: 119 FPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR--DIALEYGRQLHGHVLKHGLQYNVFV 176

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
              L+ MY  C +  D AR +F+     D+I+WN IIS Y++ G      +LF  M+ + 
Sbjct: 177 HTALVQMYLLCGQ-LDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDK- 234

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
               + P   T   +++A   S L      +++ + VK   + S+L + +A++  +A  G
Sbjct: 235 ---QVLPTTVTLVLVLSAC--SKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCG 289

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
               A  IF  M  ++++S   ++ G                             +   G
Sbjct: 290 EMDSALGIFRSMNNRDIISWTTIVSG-----------------------------FTNLG 320

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            ID +R+ F  M  KD VSW  MI G  ++  ++EA+  F  M+   +    F+++S L+
Sbjct: 321 EIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLT 380

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           +CA LG + LG+ I     +  + +D+ V NAL+ +Y   G + +   +F  M + D+ +
Sbjct: 381 ACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFT 440

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           W ++I   A       +A+  + +M +A   P+ +T+I +L+A +   +   G +   ++
Sbjct: 441 WTAMIVGLA-VNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRM 499

Query: 486 I-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             ++ +         L+    + G + +  ++   M  + + + W ++++G
Sbjct: 500 TSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAG 550



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 164/350 (46%), Gaps = 17/350 (4%)

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS--CYGKCGEMDD 512
           +SP     I++L    S  M +L  QVH Q IK  +     ++N +++  C  + G+   
Sbjct: 35  FSPPTHPLISLLETCES--MDQL-QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQY 91

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
             ++F  + E  +   WN+MI GY   +     ++L   M++RG + D +TF  +     
Sbjct: 92  ARRLFDEIPEP-NLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFT 150

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
               LE G ++H   ++  L+++V + +ALV MY  CG++D A   FD+ P  +V +WN 
Sbjct: 151 RDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNM 210

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           +IS Y + G  +++  LF  M+    LP  VT V VLSACS    +  G K   S  +  
Sbjct: 211 IISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTG-KKVHSYVKNC 269

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
            +   L   + M+D+    GE+D        M    + + W T++          T LG 
Sbjct: 270 KVESNLVLENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIVSGF-------TNLGE 321

Query: 753 --KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKE 800
              A N   +M  ++ V++  + + Y    ++++  +  + M+   VK +
Sbjct: 322 IDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPD 371



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 140/315 (44%), Gaps = 28/315 (8%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+    T+++ +  +G++  A   FD+MP+++ VSW  ++ GY       EA ++F+ M 
Sbjct: 305 DIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQ 364

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
                 + + + SVL AC   G    + G  +   + ++    D  V N LI MY  C +
Sbjct: 365 ATNVKPDEFTMVSVLTACAHLG--ALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGD 422

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             D A  IF E+  RD  +W ++I   +  G       +FS M     + S+ P+E T+ 
Sbjct: 423 -VDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNM----LKASILPDEITYI 477

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM- 257
            +++A   + L      +  L M  + G+  ++     LV   AR G    A ++ E M 
Sbjct: 478 GVLSACTHTGLVDKG-RKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMP 536

Query: 258 IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMV------------AVGNGLVNMYAKCG 305
           I+ N +    L+ G R  +E       S + +MV            AV   L N+YA C 
Sbjct: 537 IKANSIVWGALLAGCRVYRE-------SDMAEMVVKQILELEPDNGAVYVLLCNIYAACK 589

Query: 306 TIDDSRSVFRFMIGK 320
             +D R + + M+ K
Sbjct: 590 RWNDLRELRQMMMDK 604


>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 998

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 254/768 (33%), Positives = 420/768 (54%), Gaps = 52/768 (6%)

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  + N L+  Y S L   + A ++F+ +  ++L++W+S++S+Y+     +    LF + 
Sbjct: 73  DIFLVNTLLHAY-SKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQF 131

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV--- 238
            R     + KPNEY   S++ A   +   G     QI  +V K G + D+YV ++L+   
Sbjct: 132 MRSC---NEKPNEYILASVVRAC--TQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFY 186

Query: 239 ----------------------------SGFARLGNFYYARKIFEQM----------IQK 260
                                       +G+++ G    + K+F+QM          +  
Sbjct: 187 TKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLS 246

Query: 261 NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
           +V+S   +++    GK++H Y++RSG+   V++ NG ++ Y KC  +   R +F  M+ K
Sbjct: 247 SVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDK 306

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           + VSW T+I+G  QN  + +A+  F  M R G     F   S L+SC SL  +  G+Q+H
Sbjct: 307 NVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVH 366

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
              +K+ +D+D  V N L+ +YA    L+   KVF LM   D VS+N++I  ++  + L 
Sbjct: 367 AYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLC 426

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
            EA+  + +MR +  SP  + F+++L  ++S    +L +Q+H  +IKY V+ +    +AL
Sbjct: 427 -EALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSAL 485

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD 560
           +  Y KC  + D   +F  + ++ D V W +M SGY       +++ L   +     + +
Sbjct: 486 IDVYSKCSRVGDARLVFEEIQDK-DIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPN 544

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
            FTFA V++A +++A+L  G + H   ++   + D  + + LVDMY+K G I+ A + F 
Sbjct: 545 EFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFI 604

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
               ++   WNSMI+ YA+HG  +KAL +F  M ++G  P++VTFVGVLSACSH GL+D 
Sbjct: 605 STNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDL 664

Query: 681 GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC 740
           GF HF SMSQ +G+ P +E + CMV LLGRAG+L + +EFI KMPI   +++WR++L AC
Sbjct: 665 GFDHFDSMSQ-FGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSAC 723

Query: 741 CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKE 800
             +     ELG  AA M     P ++ +YVLL+N++AS G W +V + R+ M  + V KE
Sbjct: 724 RVSG--NVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKE 781

Query: 801 AGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQT 848
            GCSW+ + + +H F+A D +H +   I   L  L  +++  GY+  T
Sbjct: 782 PGCSWIEVNNEIHKFIAKDTAHRDSAPISLVLDNLLLQIKGFGYMANT 829



 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 197/683 (28%), Positives = 331/683 (48%), Gaps = 69/683 (10%)

Query: 5   KLFHLQILKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           K  H +I+  GF  +D+FL NTL++ Y ++  +  A+KLFD M  +N V+W+ +VS YTH
Sbjct: 58  KKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTH 117

Query: 64  KGMSNEACKMFKEMVRA-GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                EA  +F + +R+     N Y L SV+RAC + G  G    +Q+H LV+K     D
Sbjct: 118 HSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFG--GLNPALQIHGLVVKGGYVQD 175

Query: 123 GLVSNVLIAMYG--SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
             V   LI  Y   +C+   D AR +F+ ++ +   +W +II+ YS++G +    KLF +
Sbjct: 176 VYVCTSLIDFYTKHACI---DDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQ 232

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYS-SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           M +EG    + P++Y   S+++A      L G    +QI   V ++G++ D+ + +  + 
Sbjct: 233 M-KEG---HVCPDKYVLSSVLSACLMLKFLEGG---KQIHCYVLRSGIVMDVSMVNGFID 285

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------------------------- 271
            + +       RK+F++M+ KNVVS   ++ G                            
Sbjct: 286 FYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFG 345

Query: 272 -------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                          KG++VH Y I+  + +   V NGL++MYAKC ++ D+R VF  M 
Sbjct: 346 CTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMA 405

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
             D VS+N MI G  +     EA+  F  MR      +    +S L   ASL  + L  Q
Sbjct: 406 AIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQ 465

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           IHG  +K G+  D    +AL+ +Y+    +     VF  + + D V W ++   +   ++
Sbjct: 466 IHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYT-QQS 524

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
              E++K Y  ++ +   PN  TF  ++ AAS+ +  + G Q H QVIK    ++  + N
Sbjct: 525 ENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVAN 584

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
            L+  Y K G +++  K F   +  +D   WNSMI+ Y  +    KA+ +   M+  G +
Sbjct: 585 TLVDMYAKSGSIEEAHKAFIS-TNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLK 643

Query: 559 LDHFTFATVLSACASVATLERGME----VHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
            ++ TF  VLSAC+    L+ G +    +   G+   +E  V     +V +  + G++  
Sbjct: 644 PNYVTFVGVLSACSHTGLLDLGFDHFDSMSQFGIEPGIEHYV----CMVSLLGRAGKLYE 699

Query: 615 ASRFFDLMPVRN-VYSWNSMISG 636
           A  F + MP++     W S++S 
Sbjct: 700 AKEFIEKMPIKQAAVVWRSLLSA 722


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 257/715 (35%), Positives = 396/715 (55%), Gaps = 87/715 (12%)

Query: 297 LVNMYAKCGTIDDSRSVFR--FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           +V+ Y   G I  +RSVF    +  +D+V +N MI+G   N     AI  FC M+ +G  
Sbjct: 86  MVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145

Query: 355 SSNFSLISTLSSCASLGWIMLGQ----QIHGEGLKLGLDSDVSVSNALLSLYA----DAG 406
             +F+  S L   A L  ++  +    Q H   LK G     SVSNAL+S+Y+       
Sbjct: 146 PDDFTYASVL---AGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPS 202

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADS----------------------EALVS--- 441
            L    KVF  +PE D+ SW +++  +  +                       A++S   
Sbjct: 203 LLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYV 262

Query: 442 ------EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
                 EA++    M  +G   +  T+ +++ A ++  + +LG QVHA V++    +   
Sbjct: 263 NCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFS-FH 321

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN------ELLPKAMN-- 547
            +N+L++ Y KCG+ ++   IF +M  + D VSWN+++SGY+ +      +L+ K M   
Sbjct: 322 FDNSLVTLYYKCGKFNEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFKEMKEK 380

Query: 548 --LVWFMMQRGQRLDHF---------------------TFATVLSACASVATLERGMEVH 584
             L W +M  G   + F                      F+  + +CA +     G + H
Sbjct: 381 NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFH 440

Query: 585 ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGD 644
           A  V+   +  +  G+AL+ MY+KCG ++ A + F  MP  +  SWN++I+   +HGHG 
Sbjct: 441 AQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGV 500

Query: 645 KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCM 704
           +A+ ++ +M   G  PD +TF+ VL+ACSHAGLVD+G K+F SM  VY + P  + ++ +
Sbjct: 501 EAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARL 560

Query: 705 VDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ 764
           +DLL R+G+  + E  I  +P  P + IW  +L   CR +    ELG  AA+ LF + P+
Sbjct: 561 IDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSG-CRVH-GNMELGIIAADKLFGLIPE 618

Query: 765 NAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPE 824
           +   Y+LL+NMYA+ G+WE+VA+ RK M++  VKKE  CSW+ M+  VH F+  D SHPE
Sbjct: 619 HDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPE 678

Query: 825 KDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES-KEDLVSYHSEKIAVAFVLTRNSKL 883
            + +Y+ L++L ++MR  GYVP T F L D+E +  KED+++ HSEKIAVAF L    KL
Sbjct: 679 AEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLM---KL 735

Query: 884 P----IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           P    IRI KNLR CGDCH+ F+F+SK+V R+I+LRD  RFHHF +G+CSCG++W
Sbjct: 736 PPGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 161/603 (26%), Positives = 259/603 (42%), Gaps = 111/603 (18%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEM--PD------------- 48
           A+  H  I+  GF     + N LI+VY +  +L  A +LFDE+  PD             
Sbjct: 33  ARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCA 92

Query: 49  ------------------RNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
                             R++V +  +++G++H      A  +F +M   GF  + +   
Sbjct: 93  SGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYA 152

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD---CARRIF 147
           SVL A         K  +Q H   LKS   +   VSN L+++Y  C  S      AR++F
Sbjct: 153 SVL-AGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVF 211

Query: 148 EEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS 207
           ++I  +D  SW ++++ Y + G     F L   + + G   ++K            AY++
Sbjct: 212 DDIPEKDERSWTTMMTGYVKNG----CFDLGKELLK-GMDENMK----------LVAYNA 256

Query: 208 VLSGSY---LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS 264
           ++SG     L Q+ L MV++            +VS    L  F Y           +V+ 
Sbjct: 257 MISGYVNCGLYQEALEMVRR------------MVSSGIELDEFTYP----------SVIR 294

Query: 265 MNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                   + GK+VH Y++R   F      N LV +Y KCG  +++R++F  M  KD VS
Sbjct: 295 ACANARLLQLGKQVHAYVLRREDFSF-HFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVS 353

Query: 325 WNT-------------------------------MISGLDQNGCYEEAIMNFCAMRRDGL 353
           WN                                MISGL +NG  EE +  F  M+R+G 
Sbjct: 354 WNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGF 413

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
              +++    + SCA LG    GQQ H + +K+G DS +S  NAL+++YA  G +    +
Sbjct: 414 EPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQ 473

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           VF  MP  D VSWN++I A       V EAV  Y +M + G  P+ +TF+ +L A S   
Sbjct: 474 VFRTMPCLDSVSWNALIAALGQHGHGV-EAVDVYEEMLKKGIRPDRITFLTVLTACSHAG 532

Query: 474 MGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
           +   G +  ++    Y +         L+    + G+  + E I   +  +     W ++
Sbjct: 533 LVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEAL 592

Query: 533 ISG 535
           +SG
Sbjct: 593 LSG 595



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 162/659 (24%), Positives = 287/659 (43%), Gaps = 117/659 (17%)

Query: 76  EMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS 135
           ++VRA  + NRYA    LR C     +  +    VH  ++         + N LI +Y  
Sbjct: 6   DLVRA--IANRYAAN--LRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCK 61

Query: 136 CLESTDCARRIFEEI-----------------------------ET----RDLISWNSII 162
             E  D AR++F+EI                             ET    RD + +N++I
Sbjct: 62  SSE-LDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMI 120

Query: 163 SVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMV 222
           + +S   D  S   LF +M+ EGF    KP+++T+ S++ A  + V+       Q  A  
Sbjct: 121 TGFSHNNDGYSAINLFCKMKHEGF----KPDDFTYASVL-AGLALVVDDEKQCVQFHAAA 175

Query: 223 KKAGLLSDLYVGSALVSGFARLGN----FYYARKIFEQMIQKNVVSMNGLMEGRRKGKEV 278
            K+G      V +ALVS ++R  +     + ARK+F+ + +K+  S   +M G       
Sbjct: 176 LKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTG------- 228

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
               +++G FD+   G  L+        +D++  +         V++N MISG    G Y
Sbjct: 229 ---YVKNGCFDL---GKELLK------GMDENMKL---------VAYNAMISGYVNCGLY 267

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           +EA+     M   G+    F+  S + +CA+   + LG+Q+H   L+   D      N+L
Sbjct: 268 QEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE-DFSFHFDNSL 326

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS---------------------- 436
           ++LY   G  +    +F  MP  D VSWN+++  +  S                      
Sbjct: 327 VTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWM 386

Query: 437 --------EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
                        E +K +  M+R G+ P    F   + + +       G Q HAQ++K 
Sbjct: 387 IMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKI 446

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNL 548
              +  +  NAL++ Y KCG +++ +++F R     D VSWN++I+    +    +A+++
Sbjct: 447 GFDSSLSAGNALITMYAKCGVVEEAQQVF-RTMPCLDSVSWNALIAALGQHGHGVEAVDV 505

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG----SALVD 604
              M+++G R D  TF TVL+AC+    +++G +           + +  G    + L+D
Sbjct: 506 YEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETV---YRIPPGADHYARLID 562

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           +  + G+   A    + +P +     W +++SG     HG+  L + +  KL G +P+H
Sbjct: 563 LLCRSGKFSEAESIIESLPFKPTAEIWEALLSGC--RVHGNMELGIIAADKLFGLIPEH 619



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 228/552 (41%), Gaps = 121/552 (21%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGD----LASASKLFDEMPDRNSVSWA------- 55
           FH   LK G  Y   + N L++VY R       L SA K+FD++P+++  SW        
Sbjct: 171 FHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYV 230

Query: 56  -------------------------CIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
                                     ++SGY + G+  EA +M + MV +G  L+ +   
Sbjct: 231 KNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYP 290

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           SV+RAC        + G QVH  VL+  + F     N L+ +Y  C +  + AR IFE++
Sbjct: 291 SVIRAC--ANARLLQLGKQVHAYVLR-REDFSFHFDNSLVTLYYKCGKFNE-ARAIFEKM 346

Query: 151 ETRDLISWNSIISVY---SQRGDTISVF----------------------------KLFS 179
             +DL+SWN+++S Y      G+   +F                            KLFS
Sbjct: 347 PAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFS 406

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            M+REGF    +P +Y F   I +   +VL      QQ  A + K G  S L  G+AL++
Sbjct: 407 CMKREGF----EPCDYAFSGAIKSC--AVLGAYCNGQQFHAQLVKIGFDSSLSAGNALIT 460

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY--------LIRSGLFDMV 291
            +A+ G    A+++F  M   + VS N L+     G+  HG         +++ G+    
Sbjct: 461 MYAKCGVVEEAQQVFRTMPCLDSVSWNALIAAL--GQHGHGVEAVDVYEEMLKKGIRPDR 518

Query: 292 AVGNGLVNMYAKCGTIDDSR-------SVFRFMIGKDSVSWNTMISGLDQNGCYEEA--I 342
                ++   +  G +D  R       +V+R   G D   +  +I  L ++G + EA  I
Sbjct: 519 ITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGAD--HYARLIDLLCRSGKFSEAESI 576

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-L 401
           +     +    +       + LS C   G + LG  I       GL  +   +  LLS +
Sbjct: 577 IESLPFKPTAEIWE-----ALLSGCRVHGNMELG--IIAADKLFGLIPEHDGTYMLLSNM 629

Query: 402 YADAGYLSRCLKVFFLMPEHD-----QVSW---NSVIGAFA--DSEALVSEAVKYYL--- 448
           YA  G      +V  LM +         SW    + +  F   D+    +EAV  YL   
Sbjct: 630 YAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDL 689

Query: 449 --DMRRAGWSPN 458
             +MRR G+ P+
Sbjct: 690 GKEMRRLGYVPD 701


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/676 (37%), Positives = 386/676 (57%), Gaps = 18/676 (2%)

Query: 273 RKGKEVHGYLIRSGLFD--MVAVGNGLVNMYAKCGTIDDSRSVFRFMI-GK-DSVSWNTM 328
           R G+E H + +++GL         N L++MYA+ G + D++ +F     G+ D V+WNTM
Sbjct: 183 RLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTM 242

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG- 387
           +S L Q+G ++EA+     M   G+     +  S L +C+ L  + +G+++H   +K   
Sbjct: 243 VSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDE 302

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV--SWNSVIGAFADSEALVSEAVK 445
           L ++  V++AL+ +YA    + +  +VF ++P+  +    WN++I  +A +  +  EA++
Sbjct: 303 LAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQA-GMDEEALR 361

Query: 446 YYLDMR-RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
            +  M   AG+ P   T  ++L A +          VH  V+K  +A    ++NAL+  Y
Sbjct: 362 LFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMY 421

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR---GQRLDH 561
            + G+ D   +IFA M +  D VSWN++I+G +    +  A  L   M Q    G   + 
Sbjct: 422 ARLGKTDVARRIFA-MVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNA 480

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
            T  T+L  CA +A   RG E+H   VR  L+ DV +GSALVDMY+KCG +  +   FD 
Sbjct: 481 ITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDR 540

Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDE 680
           +P RN  +WN +I  Y  HG G +A  LF +M   G   P+ VTF+  L+ACSH+G+VD 
Sbjct: 541 LPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDR 600

Query: 681 GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL-IWRTVLGA 739
           G + F +M + +G+ P  +  +C+VD+LGRAG LD+    +  M      +  W T+LGA
Sbjct: 601 GLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGA 660

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKK 799
           C R + R   LG  A   L E+EP+ A +YVLL N+Y++ G+W   A+ R  M+   V K
Sbjct: 661 C-RLH-RNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAK 718

Query: 800 EAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES 859
           E GCSW+ +   +H F+AG+ +HP  + ++  ++ L  +M   GY P T   L D++   
Sbjct: 719 EPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGD 778

Query: 860 KEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSN 918
           K  ++  HSEK+A+AF L R +    IR+ KNLRVC DCH A KF+SK+VGREIVLRD  
Sbjct: 779 KAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVR 838

Query: 919 RFHHFNDGKCSCGDYW 934
           RFHHF +G+CSCGDYW
Sbjct: 839 RFHHFRNGQCSCGDYW 854



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 234/485 (48%), Gaps = 21/485 (4%)

Query: 273 RKGKEVHGYLIRSGLF--DMVAVGNGLVNMYAKCGTIDDSRSVFRFMI--GKDSVSWNTM 328
           R  + +H   +R GL      AV N L+  YA+CG +  +  VF  +     D+VS+N++
Sbjct: 74  RSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSL 133

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL----GWIMLGQQIHGEGL 384
           IS L     ++ A+    AM   G   ++F+L+S L + + L      + LG++ H   L
Sbjct: 134 ISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFAL 193

Query: 385 KLGL--DSDVSVSNALLSLYADAGYLSRCLKVFF-LMP-EHDQVSWNSVIGAFADSEALV 440
           K GL         NALLS+YA  G ++   ++F    P   D V+WN+++     S  + 
Sbjct: 194 KNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQS-GMF 252

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN-VANETTIENA 499
            EAV+   DM   G  P+GVTF + L A S   +  +G ++HA VIK + +A  + + +A
Sbjct: 253 DEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASA 312

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVS-WNSMISGYIHNELLPKAMNLVWFM-MQRGQ 557
           L+  Y    ++    ++F  + +   ++  WN+MI GY    +  +A+ L   M  + G 
Sbjct: 313 LVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGF 372

Query: 558 RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
                T A+VL ACA          VH   V+  +  +  + +AL+DMY++ G+ D A R
Sbjct: 373 VPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARR 432

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTL---FSQMKLDGPLPDHVTFVGVLSACSH 674
            F ++ + +V SWN++I+G    GH   A  L     Q++  G +P+ +T + +L  C+ 
Sbjct: 433 IFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAI 492

Query: 675 AGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWR 734
                 G K     +  + L   +   S +VD+  + G L       +++P   N++ W 
Sbjct: 493 LAAPARG-KEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP-RRNTITWN 550

Query: 735 TVLGA 739
            ++ A
Sbjct: 551 VLIMA 555



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 220/481 (45%), Gaps = 65/481 (13%)

Query: 8   HLQILKHGF--AYDVFLCNTLINVYVRVGDLASASKLF-DEMPDR-NSVSWACIVSGYTH 63
           H   LK+G    +  F  N L+++Y R+G +A A +LF    P R + V+W  +VS    
Sbjct: 189 HAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQ 248

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-TFD 122
            GM +EA +   +MV  G   +     S L AC          G ++H  V+K ++   +
Sbjct: 249 SGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRL--ELLDVGREMHAYVIKDDELAAN 306

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIET--RDLISWNSIISVYSQRGDTISVFKLFSR 180
             V++ L+ MY +  E    AR++F+ +    + L  WN++I  Y+Q G      +LF+R
Sbjct: 307 SFVASALVDMYAT-HEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFAR 365

Query: 181 MQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           M+ E       P E T  S++ A A S   +G    + +   V K G+  + +V +AL+ 
Sbjct: 366 MEAEA---GFVPCETTMASVLPACARSEAFAGK---EAVHGYVVKRGMAGNRFVQNALMD 419

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------------------------- 271
            +ARLG    AR+IF  +   +VVS N L+ G                            
Sbjct: 420 MYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPN 479

Query: 272 ----------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                             +GKE+HGY +R  L   VAVG+ LV+MYAKCG +  SR+VF 
Sbjct: 480 AITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFD 539

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIM 374
            +  +++++WN +I     +G   EA + F  M   G    N  + ++ L++C+  G + 
Sbjct: 540 RLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVD 599

Query: 375 LGQQI-HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ--VSWNSVIG 431
            G Q+ H      G++    +   ++ +   AG L     +   M   +Q   +W++++G
Sbjct: 600 RGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLG 659

Query: 432 A 432
           A
Sbjct: 660 A 660



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 14/278 (5%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K G A + F+ N L+++Y R+G    A ++F  +   + VSW  +++G   +G  
Sbjct: 399 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 458

Query: 68  NEACKMFKEMVR---AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            +A ++ +EM +    G + N   L ++L  C          G ++H   ++     D  
Sbjct: 459 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPA--RGKEIHGYAVRHALDTDVA 516

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V + L+ MY  C      +R +F+ +  R+ I+WN +I  Y   G       LF RM   
Sbjct: 517 VGSALVDMYAKC-GCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTAS 575

Query: 185 GFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           G     +PNE TF  +L   ++S ++     LQ   AM +  G+     + + +V    R
Sbjct: 576 G---EARPNEVTFMAALAACSHSGMVDRG--LQLFHAMERDHGVEPTPDILACVVDILGR 630

Query: 244 LGNFYYARKIFEQMI--QKNVVSMNGLMEGRRKGKEVH 279
            G    A  +   M   ++ V + + ++   R  + VH
Sbjct: 631 AGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVH 668



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   ++H    DV + + L+++Y + G LA +  +FD +P RN+++W  ++  Y   
Sbjct: 500 KEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMH 559

Query: 65  GMSNEACKMFKEMVRAG-FLLNRYALGSVLRACQECG 100
           G+  EA  +F  M  +G    N     + L AC   G
Sbjct: 560 GLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSG 596



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 73/343 (21%), Positives = 133/343 (38%), Gaps = 64/343 (18%)

Query: 552 MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL--EFDVVIGSALVDMYSKC 609
           M    Q+LDH      + + A++        +HA  +R  L       + +AL+  Y++C
Sbjct: 48  MASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARC 107

Query: 610 GRIDYASRFFDLM--PVRNVYSWNSMISGY----------------ARHGHGDKALTLFS 651
           GR+  A   F  +     +  S+NS+IS                     GH   + TL S
Sbjct: 108 GRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVS 167

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH------FKSMSQVY---GLIPQLEQ-- 700
            ++    LP     V  L   +HA  +  G  H      F ++  +Y   GL+   ++  
Sbjct: 168 VLRAVSHLPAAAAAV-RLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLF 226

Query: 701 ------------FSCMVDLLGRAGELDKIEEFINKM---PITPNSLIWRTVLGACCRANC 745
                       ++ MV +L ++G  D+  + +  M    + P+ + + + L AC R   
Sbjct: 227 AGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLEL 286

Query: 746 RKTELGRKAANMLFEMEPQNAVNYV--LLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
              ++GR+    + + +   A ++V   L +MYA+    E V KAR+         +   
Sbjct: 287 --LDVGREMHAYVIKDDELAANSFVASALVDMYAT---HEQVGKARQVFDMVPDSGKQLG 341

Query: 804 SWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVP 846
            W  M  G          + +  +  E L+   +   +AG+VP
Sbjct: 342 MWNAMICG----------YAQAGMDEEALRLFARMEAEAGFVP 374


>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/659 (37%), Positives = 387/659 (58%), Gaps = 12/659 (1%)

Query: 262 VVSMNGLMEGRRKGK---EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
           + S+N L+   R  K   ++H  LI + L  +  + N L+N+YAKCG++D +  +F    
Sbjct: 30  LTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAP 89

Query: 319 --GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
              K+ VSW ++I+ L +     +A+  F  MRR G+  ++++  + LS+C      + G
Sbjct: 90  DDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHG 149

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +Q+H    K G  ++V V +AL+ +YA    +    KVF  MP  + VSWN++I  F  +
Sbjct: 150 EQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQN 209

Query: 437 EALVSEAVKYYLDMRRAGWSP-NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           + L  +A+ ++  +     +  + V+F ++ +A ++    + G QVH   +K  V N   
Sbjct: 210 K-LYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVY 268

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           I N+L   YGKCG  +D  K+F+    R D V+WN MI  Y++N     A N  W M ++
Sbjct: 269 INNSLSDMYGKCGLFNDVAKLFSNTGAR-DVVTWNIMIMAYVYNHNYEDACNSFWMMRRK 327

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G   D  ++++VL +CA++A L +G  +H   +R+    ++ + S+L+ MY+KCG +  A
Sbjct: 328 GSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDA 387

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
            + F+    RNV  W ++I+   +HGH +  + LF QM  +G  PD++TFV VLSACSH 
Sbjct: 388 FQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHT 447

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           G V+EGF +F SM +V+G+ P  E ++C+VDLL RAGELD+ + FI  MPI P++ +W  
Sbjct: 448 GRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGA 507

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           +L AC   N     +G++ A  LF++EP N  NYVLL N+    G   +  + R+ M+  
Sbjct: 508 LLSAC--RNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESI 565

Query: 796 EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
            V+KE GCSW+ +K+  +VF   D+SH +   IYE L++L + ++  GYV +T+FA+   
Sbjct: 566 GVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVAETEFAINTA 625

Query: 856 EPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIV 913
           E E KE  + YHSEKIA+AF +L+  +  PIRI KNLR CGDCH+  KF S+I  REI+
Sbjct: 626 E-EYKEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTCGDCHTVMKFASEIFAREII 683



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 121/485 (24%), Positives = 207/485 (42%), Gaps = 53/485 (10%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIV 58
           SK A   H Q++        FL N L+N+Y + G +     LF   PD  +N VSW  ++
Sbjct: 43  SKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLI 102

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
           +  T      +A   F  M R+G   N Y   +VL AC +   S    G Q+H LV K  
Sbjct: 103 TQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTAS--VHGEQMHSLVWKHG 160

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              +  V + L+ MY  C +    A ++FEE+  R+L+SWN++I  + Q          F
Sbjct: 161 FLAEVFVVSALVDMYAKCCDML-MAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFF 219

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
             +  E        +E +F S+ +A  ++        +Q+  +  K G+ + +Y+ ++L 
Sbjct: 220 KTLLLENL---TALDEVSFSSVFSACANA--GNLEFGKQVHGVALKLGVWNLVYINNSLS 274

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRKGK----- 276
             + + G F    K+F     ++VV+ N ++                   RRKG      
Sbjct: 275 DMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEA 334

Query: 277 -------------------EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                               +H  +IRSG    + V + L+ MYAKCG++ D+  +F   
Sbjct: 335 SYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEET 394

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             ++ V W  +I+   Q+G     +  F  M R+G+     + +S LS+C+  G +  G 
Sbjct: 395 EDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGF 454

Query: 378 QIHGEGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFAD 435
                 +K+ G+         ++ L + AG L R  +   LMP + D   W +++ A  +
Sbjct: 455 FYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRN 514

Query: 436 SEALV 440
              L+
Sbjct: 515 HSNLI 519



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 147/321 (45%), Gaps = 18/321 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   LK G    V++ N+L ++Y + G     +KLF     R+ V+W  ++  Y + 
Sbjct: 252 KQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYN 311

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
               +AC  F  M R G + +  +  SVL +C     +    G  +H  +++S    +  
Sbjct: 312 HNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANL--AALYQGTLIHNQIIRSGFVKNLR 369

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V++ LI MY  C    D A +IFEE E R+++ W +II+   Q G    V +LF +M RE
Sbjct: 370 VASSLITMYAKCGSLVD-AFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLRE 428

Query: 185 GFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           G    +KP+  TF S+++A   +  V  G +      +M+K  G+       + +V   +
Sbjct: 429 G----IKPDYITFVSVLSACSHTGRVEEGFFYFN---SMIKVHGIYPGHEHYACIVDLLS 481

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNG--LMEGRRKGKEVHGYLIRSGLFDMVAVGNG---- 296
           R G    A++  E M  K   S+ G  L   R     + G  +   LFD+     G    
Sbjct: 482 RAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVL 541

Query: 297 LVNMYAKCGTIDDSRSVFRFM 317
           L N+  + G ++++  V R M
Sbjct: 542 LCNILTRNGMLNEADEVRRKM 562


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 258/787 (32%), Positives = 414/787 (52%), Gaps = 53/787 (6%)

Query: 111 HCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD 170
           H   + +    D  ++N+L+  Y       D ARR+F+ +  ++L+SW S IS+++Q G 
Sbjct: 34  HARAVVTGALPDLFLANLLLRAYSKLGRVRD-ARRLFDRMPHKNLVSWGSAISMHAQHGC 92

Query: 171 TISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLS 229
                 LF+  QR     +  PNE+   S + A A S  +S     QQ+  +  + GL  
Sbjct: 93  EEDAVALFAAFQRASGGEA--PNEFLLASALRACAQSRAVS---FGQQVHGVAVRIGLDG 147

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK--------------- 274
           ++YVG+AL++ +A++G    A  +F+ +  KN V+   ++ G  +               
Sbjct: 148 NVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMG 207

Query: 275 --------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
                                     G++ HGY  R  +    +V N L+++Y KC  + 
Sbjct: 208 LDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLS 267

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
            +R +F  M  ++ VSW TMI+G  QN C  EA+  F  + ++G     F+  S L+SC 
Sbjct: 268 LARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCG 327

Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
           SL  I  G+Q+H   +K  L+SD  V N+L+ +YA   +L+    VF  + E D +S+N+
Sbjct: 328 SLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNA 387

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
           +I  ++    L   A+  +  MR     P+ +TF+++L  +SS S  +L  Q+H  ++K 
Sbjct: 388 MIEGYSRLGDLAG-AIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKS 446

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNL 548
             + +    ++L+  Y K   ++D + +F  M   RD V WN+MI G   NE   +A+ L
Sbjct: 447 GTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLM-HNRDMVIWNAMIFGLAQNEQGEEAVKL 505

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
              +   G   + FTF  +++  +++ ++  G + HA  ++A  + D  + +AL+DMY+K
Sbjct: 506 FNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAK 565

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
           CG I      F+    ++V  WNSMIS YA+HG  ++AL +F  M   G  P++VTFVGV
Sbjct: 566 CGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGV 625

Query: 669 LSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITP 728
           LSAC+HAGLVDEG +HF  M   Y + P  E ++ +V+L GR+G+L   +EFI +MPI P
Sbjct: 626 LSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEP 685

Query: 729 NSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKA 788
            + +WR++L AC        E+GR A  M    +P ++   VL++N+YAS G W D  K 
Sbjct: 686 AAAVWRSLLSACHLFG--NVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKL 743

Query: 789 RKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQT 848
           R+ M  A V KE G SW+ +   VH F+A    HPE D+IY  L EL   +++ GY+P T
Sbjct: 744 RQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDELTSILKNGGYLPDT 803

Query: 849 -KFALFD 854
            +  L D
Sbjct: 804 SELTLLD 810



 Score =  266 bits (679), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 187/678 (27%), Positives = 317/678 (46%), Gaps = 58/678 (8%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
            L H + +  G   D+FL N L+  Y ++G +  A +LFD MP +N VSW   +S +   
Sbjct: 31  PLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQH 90

Query: 65  GMSNEACKMFKEMVRA--GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
           G   +A  +F    RA  G   N + L S LRAC +       FG QVH + ++     +
Sbjct: 91  GCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQ--SRAVSFGQQVHGVAVRIGLDGN 148

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V   LI +Y   +   D A  +F+ +  ++ ++W ++I+ YSQ G      +LF +M 
Sbjct: 149 VYVGTALINLYAK-VGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMG 207

Query: 183 REGFRYSLKPNEYTFGSLITAAYS-SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            +G R    P+ +   S ++A  +   L G    +Q      +  + +D  V +AL+  +
Sbjct: 208 LDGVR----PDRFVLASAVSACSALGFLEGG---RQTHGYAYRIAVETDASVINALIDLY 260

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR---------------------------- 273
            +      ARK+F+ M  +N+VS   ++ G                              
Sbjct: 261 CKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACA 320

Query: 274 -------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                        +G++VH + I++ L     V N L++MYAKC  + ++R+VF  +   
Sbjct: 321 SILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAED 380

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D++S+N MI G  + G    AI  F  MR   L  S  + +S L   +S   I L +QIH
Sbjct: 381 DAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIH 440

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
           G  +K G   D+   ++L+ +Y+    +     VF LM   D V WN++I   A +E   
Sbjct: 441 GLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQ-G 499

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
            EAVK +  ++ +G +PN  TF+ ++  AS+      G Q HAQ+IK    ++  + NAL
Sbjct: 500 EEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNAL 559

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD 560
           +  Y KCG + +   +F   +  +D + WNSMIS Y  +    +A+ +   M   G   +
Sbjct: 560 IDMYAKCGFIKEGRLLF-ESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPN 618

Query: 561 HFTFATVLSACASVATLERGM-EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           + TF  VLSACA    ++ G+        +  +E      +++V+++ + G++  A  F 
Sbjct: 619 YVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFI 678

Query: 620 DLMPVRNVYS-WNSMISG 636
           + MP+    + W S++S 
Sbjct: 679 ERMPIEPAAAVWRSLLSA 696



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 10/255 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           +K  H  I+K G + D++  ++LI+VY +   +  A  +F+ M +R+ V W  ++ G   
Sbjct: 436 SKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQ 495

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                EA K+F ++  +G   N +   +++        S F  G Q H  ++K+    D 
Sbjct: 496 NEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTL-VSMFH-GQQFHAQIIKAGADSDH 553

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            VSN LI MY  C    +  R +FE    +D+I WNS+IS Y+Q G       +F  M  
Sbjct: 554 HVSNALIDMYAKCGFIKE-GRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGG 612

Query: 184 EGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            G    ++PN  TF G L   A++ ++     L+    M  K  +       +++V+ F 
Sbjct: 613 TG----VEPNYVTFVGVLSACAHAGLVDEG--LRHFDFMKTKYAIEPGTEHYASVVNLFG 666

Query: 243 RLGNFYYARKIFEQM 257
           R G  + A++  E+M
Sbjct: 667 RSGKLHAAKEFIERM 681


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 251/715 (35%), Positives = 398/715 (55%), Gaps = 20/715 (2%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNV----------VSMNGLMEGRRKGKEVH 279
           +L+  + LV G+A+ G F  A  ++ +M+   V          +   G M    +G+E+H
Sbjct: 171 NLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIH 230

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
            ++IR G    V V N L+ MY KCG ++ +R VF  M  +D +SWN MISG  +NG   
Sbjct: 231 VHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCL 290

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           E +  F  M +  +     ++ S +++C  LG   LG+QIHG  L+     D S+ N+L+
Sbjct: 291 EGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLI 350

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
            +Y+  G +     VF      D VSW ++I  + +   +  +A++ Y  M   G  P+ 
Sbjct: 351 PMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENC-LMPQKALETYKMMEAEGIMPDE 409

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           +T   +L+A S      +G  +H    +  + + + + N+L+  Y KC  +D   +IF  
Sbjct: 410 ITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHS 469

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
             E+ + VSW S+I G   N    +A+     M++R  + +  T   VLSACA +  L  
Sbjct: 470 TLEK-NIVSWTSIILGLRINNRCFEALFFFREMIRR-LKPNSVTLVCVLSACARIGALTC 527

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA-SRFFDLMPVRNVYSWNSMISGYA 638
           G E+HA  +R  + FD  + +A++DMY +CGR++YA  +FF +     V SWN +++GYA
Sbjct: 528 GKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSV--DHEVTSWNILLTGYA 585

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
             G G  A  LF +M      P+ VTF+ +L ACS +G+V EG ++F SM   Y ++P L
Sbjct: 586 ERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNL 645

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
           + ++C+VDLLGR+G+L++  EFI KMP+ P+  +W  +L + CR +    ELG  AA  +
Sbjct: 646 KHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNS-CRIH-HHVELGELAAENI 703

Query: 759 FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
           F+ +  +   Y+LL+N+YA  GKW+ VA+ RK M++  +  + GCSWV +K  VH F++ 
Sbjct: 704 FQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSS 763

Query: 819 DESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLT 878
           D  HP+   I   L+   +KM++AG V   + +  D+   SK D+   HSE++A+ F L 
Sbjct: 764 DNFHPQIKEINALLERFYKKMKEAG-VEGPESSHMDIMEASKADIFCGHSERLAIVFGLI 822

Query: 879 RNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
            +   +PI + KNL +C  CH+  KFIS+ V REI +RD+ +FHHF  G CSC D
Sbjct: 823 NSGPGMPIWVTKNLYMCQSCHNIVKFISREVRREISVRDAEQFHHFKGGICSCTD 877



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 154/563 (27%), Positives = 261/563 (46%), Gaps = 55/563 (9%)

Query: 22  LCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAG 81
           L N L++++VR G+L  A  +F  M  RN  SW  +V GY   G+ +EA  ++  M+  G
Sbjct: 143 LGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVG 202

Query: 82  FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD 141
              + Y    VLR C   G      G ++H  V++     D  V N LI MY  C +  +
Sbjct: 203 VKPDVYTFPCVLRTCG--GMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGD-VN 259

Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
            AR +F+++  RD ISWN++IS Y + G  +   +LF  M     +Y + P+  T  S+I
Sbjct: 260 TARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMM----IKYPVDPDLMTMTSVI 315

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
           TA    +L    L +QI   V +     D  + ++L+  ++ +G    A  +F +   ++
Sbjct: 316 TAC--ELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRD 373

Query: 262 VVSMNGLMEGRRK-----------------------------------------GKEVHG 280
           +VS   ++ G                                            G  +H 
Sbjct: 374 LVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHE 433

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
              + GL     V N L++MYAKC  ID +  +F   + K+ VSW ++I GL  N    E
Sbjct: 434 VAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFE 493

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A+  F  M R  L  ++ +L+  LS+CA +G +  G++IH   L+ G+  D  + NA+L 
Sbjct: 494 ALFFFREMIRR-LKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILD 552

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +Y   G +    K FF + +H+  SWN ++  +A+     + A + +  M  +  SPN V
Sbjct: 553 MYVRCGRMEYAWKQFFSV-DHEVTSWNILLTGYAE-RGKGAHATELFQRMVESNVSPNEV 610

Query: 461 TFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           TFI+IL A S   M   G +  ++   KY++         ++   G+ G++++  +   +
Sbjct: 611 TFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQK 670

Query: 520 MSERRDEVSWNSMI-SGYIHNEL 541
           M  + D   W +++ S  IH+ +
Sbjct: 671 MPMKPDPAVWGALLNSCRIHHHV 693



 Score =  210 bits (534), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/412 (30%), Positives = 220/412 (53%), Gaps = 5/412 (1%)

Query: 271 GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
            R++G  V+ Y+  S     + +GN L++M+ + G + D+  VF  M  ++  SWN ++ 
Sbjct: 121 ARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVG 180

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           G  + G ++EA+  +  M   G+    ++    L +C  +  ++ G++IH   ++ G +S
Sbjct: 181 GYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFES 240

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           DV V NAL+++Y   G ++    VF  MP  D++SWN++I  + ++  +  E ++ +  M
Sbjct: 241 DVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFEN-GVCLEGLRLFGMM 299

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
            +    P+ +T  +++ A       +LG Q+H  V++     + +I N+L+  Y   G +
Sbjct: 300 IKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLI 359

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLP-KAMNLVWFMMQRGQRLDHFTFATVLS 569
           ++ E +F+R +E RD VSW +MISGY  N L+P KA+     M   G   D  T A VLS
Sbjct: 360 EEAETVFSR-TECRDLVSWTAMISGY-ENCLMPQKALETYKMMEAEGIMPDEITIAIVLS 417

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           AC+ +  L+ GM +H    +  L    ++ ++L+DMY+KC  ID A   F     +N+ S
Sbjct: 418 ACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVS 477

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           W S+I G   +    +AL  F +M +    P+ VT V VLSAC+  G +  G
Sbjct: 478 WTSIILGLRINNRCFEALFFFREM-IRRLKPNSVTLVCVLSACARIGALTCG 528



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 215/468 (45%), Gaps = 52/468 (11%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H+ ++++GF  DV + N LI +YV+ GD+ +A  +FD+MP+R+ +SW  ++SGY   G+
Sbjct: 229 IHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGV 288

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             E  ++F  M++     +   + SV+ AC+  G    + G Q+H  VL++    D  + 
Sbjct: 289 CLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDD--RLGRQIHGYVLRTEFGRDPSIH 346

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI MY S +   + A  +F   E RDL+SW ++IS Y          + +  M+ EG 
Sbjct: 347 NSLIPMYSS-VGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEG- 404

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              + P+E T   +++A   S L    +   +  + K+ GL+S   V ++L+  +A+   
Sbjct: 405 ---IMPDEITIAIVLSAC--SCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKC 459

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------------- 274
              A +IF   ++KN+VS   ++ G R                                 
Sbjct: 460 IDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRRLKPNSVTLVCVLSAC 519

Query: 275 --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                   GKE+H + +R+G+     + N +++MY +CG ++ +   F F +  +  SWN
Sbjct: 520 ARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQF-FSVDHEVTSWN 578

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLK 385
            +++G  + G    A   F  M    +  +  + IS L +C+  G +  G +  +    K
Sbjct: 579 ILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYK 638

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
             +  ++     ++ L   +G L    +    MP + D   W +++ +
Sbjct: 639 YSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNS 686



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 136/303 (44%), Gaps = 16/303 (5%)

Query: 21  FLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRA 80
            + N+LI++Y +   +  A ++F    ++N VSW  I+ G        EA   F+EM+R 
Sbjct: 445 IVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR 504

Query: 81  GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST 140
               N   L  VL AC   G      G ++H   L++  +FDG + N ++ MY  C    
Sbjct: 505 -LKPNSVTLVCVLSACARIG--ALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRME 561

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
              ++ F      ++ SWN +++ Y++RG      +LF RM       ++ PNE TF S+
Sbjct: 562 YAWKQFFS--VDHEVTSWNILLTGYAERGKGAHATELFQRMVES----NVSPNEVTFISI 615

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
           + A   S +     L+   +M  K  ++ +L   + +V    R G    A +  ++M  K
Sbjct: 616 LCACSRSGMVAEG-LEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMK 674

Query: 261 NVVSMNG-LMEGRRKGKEVH-GYLIRSGLF--DMVAVGNGLV--NMYAKCGTIDDSRSVF 314
              ++ G L+   R    V  G L    +F  D  +VG  ++  N+YA  G  D    V 
Sbjct: 675 PDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVR 734

Query: 315 RFM 317
           + M
Sbjct: 735 KMM 737



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 5/195 (2%)

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
           L +AM+ +  M +    ++   +  ++  C      + G  V++    +     + +G+A
Sbjct: 87  LDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNA 146

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+ M+ + G +  A   F  M  RN++SWN ++ GYA+ G  D+AL L+ +M   G  PD
Sbjct: 147 LLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPD 206

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
             TF  VL  C     +  G +        YG    ++  + ++ +  + G+++      
Sbjct: 207 VYTFPCVLRTCGGMPNLVRG-REIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVF 265

Query: 722 NKMP----ITPNSLI 732
           +KMP    I+ N++I
Sbjct: 266 DKMPNRDRISWNAMI 280


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 256/719 (35%), Positives = 389/719 (54%), Gaps = 84/719 (11%)

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFM--IGKDSVSWNTMISGLDQNGCYEEAIMNFCAM--R 349
              LV+ YA  G + DS + F  +    +D+V  N MIS   +      A+  F ++   
Sbjct: 92  ATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLAS 151

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQ--QIHGEGLKLGLDSDVSVSNALLSLY--ADA 405
            D L   ++S  S LS+   +  + +    Q+H    KLG  + +SVSNAL++LY   DA
Sbjct: 152 DDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDA 211

Query: 406 GYLSR-CLKVFFLMPEHDQVSWNSVI-------------GAFAD---------------- 435
             ++R   KV   MPE D+++W +++              AF +                
Sbjct: 212 PGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGY 271

Query: 436 -SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK----YNV 490
               + +EA + +  M      P+  TF ++L+A ++      G  VH Q I+    +  
Sbjct: 272 VQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVP 331

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELL-------- 542
                + NAL++ Y K G++    KIF  M+  +D VSWN+++SGYI +  L        
Sbjct: 332 EAALPVNNALVTLYSKSGKIAVATKIFDSMT-LKDVVSWNTILSGYIESGCLDNAARIFK 390

Query: 543 --PKAMNLVWFMMQRGQ---------------------RLDHFTFATVLSACASVATLER 579
             P    L W +M  G                      +   +T+A  ++AC  +  L+ 
Sbjct: 391 EMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKH 450

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G ++HA  V+   E     G+AL+ MY++CG +  A   F +MP  +  SWN+MIS   +
Sbjct: 451 GKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQ 510

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
           HGHG +AL LF QM   G  PD ++F+ +L+AC+HAGLVD+GF++F+SM + +G+ P  +
Sbjct: 511 HGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGED 570

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            ++ ++DLLGRAG + +  + I  MP  P   IW  +L   CR N    ELG  AA+ LF
Sbjct: 571 HYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSG-CRING-DMELGAYAADQLF 628

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           +M P++   Y+LL+N Y++ G+W D A+ RK M++  VKKE GCSW+ + + VHVF+ GD
Sbjct: 629 KMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGD 688

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR 879
             HP+   +Y  L+ +  KMR  GYVP TKFAL D+ P  KE ++  HSE++AV+F L  
Sbjct: 689 TKHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLL- 747

Query: 880 NSKLP----IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             KLP    + ++KNL++CGDCH+A  F+S+ VGREIV+RD  RFHHF DG+CSCG+YW
Sbjct: 748 --KLPAGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 143/580 (24%), Positives = 248/580 (42%), Gaps = 83/580 (14%)

Query: 5   KLFHLQILKHGFAYDVFL---------CNTLINVYVRVGDLASASKLFDEMP--DRNSVS 53
           +L HL  L    A    L           +L++ Y   G L  ++  FD +P   R++V 
Sbjct: 65  RLLHLYTLSPDLATPAVLFRADPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVL 124

Query: 54  WACIVSGYTHKGMSNEACKMFKEMVRAGFLL--NRYALGSVLRACQECGPSGFKFGMQVH 111
              ++S +    ++  A  +F+ ++ +   L  + Y+  S+L A  +          Q+H
Sbjct: 125 HNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLH 184

Query: 112 CLVLKSNQTFDGLVSNVLIAMYGSC---------------LESTD--------------- 141
           C V K        VSN LIA+Y  C               +   D               
Sbjct: 185 CAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKG 244

Query: 142 ---CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
               AR  FEEI+    + WN++IS Y Q G     F+LF RM  +     + P+E+TF 
Sbjct: 245 DVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSK----RIPPDEFTFT 300

Query: 199 SLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           SL++A  ++   L G  +  Q + +       + L V +ALV+ +++ G    A KIF+ 
Sbjct: 301 SLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDS 360

Query: 257 MIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
           M  K+VVS N ++ G                             Y + G +D++  +F+ 
Sbjct: 361 MTLKDVVSWNTILSG-----------------------------YIESGCLDNAARIFKE 391

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M  K  +SW  M+SG    G  E+A+  F  MR + +   +++    +++C  LG +  G
Sbjct: 392 MPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHG 451

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +Q+H   ++ G ++  S  NALL++YA  G +     VF +MP  D VSWN++I A    
Sbjct: 452 KQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALG-Q 510

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETT 495
                EA++ +  M   G  P+ ++F+ IL A +   +   G Q    + + + ++    
Sbjct: 511 HGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGED 570

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
               L+   G+ G + +   +   M        W +++SG
Sbjct: 571 HYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSG 610



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 86/213 (40%), Gaps = 33/213 (15%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  +++ GF       N L+ +Y R G +  A  +F  MP+ +SVSW  ++S  
Sbjct: 449 KHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISAL 508

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   EA ++F +MV  G   +R +  ++L AC   G            LV    Q F
Sbjct: 509 GQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAG------------LVDDGFQYF 556

Query: 122 DGLVSNVLIA----MYGSCLESTDCARRIFEEIETRDLIS----------WNSIISVYSQ 167
           + +  +  I+     Y   ++    A RI    E RDLI           W +I+S    
Sbjct: 557 ESMERDFGISPGEDHYARLIDLLGRAGRIG---EARDLIKTMPFEPTPAIWEAILSGCRI 613

Query: 168 RGD----TISVFKLFSRMQREGFRYSLKPNEYT 196
            GD      +  +LF  +      Y L  N Y+
Sbjct: 614 NGDMELGAYAADQLFKMVPEHDGTYILLSNTYS 646



 Score = 46.6 bits (109), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 86/220 (39%), Gaps = 44/220 (20%)

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPV--RNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           V  ++LV  Y+  GR+  ++ FFD +PV  R+    N+MIS +AR      A+++F  + 
Sbjct: 90  VAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLL 149

Query: 655 L--DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL-IPQLEQFSCMVDLLGRA 711
              D   PD  +F  +LSA                + Q++ L +    Q  C V  LG  
Sbjct: 150 ASDDSLRPDDYSFTSLLSA----------------VGQMHDLAVSHCTQLHCAVHKLGAG 193

Query: 712 GELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVL 771
             L              N+LI            C    + R A  +L EM  ++ + +  
Sbjct: 194 AVLS-----------VSNALI-------ALYMKCDAPGVTRDARKVLDEMPEKDELTWTT 235

Query: 772 LANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
           +   +   G   DV  AR A +  E+  E    W  M  G
Sbjct: 236 IVVGHVRKG---DVHAARSAFE--EIDGEFDVVWNAMISG 270


>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial; Flags: Precursor
 gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
 gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1028

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 275/885 (31%), Positives = 443/885 (50%), Gaps = 91/885 (10%)

Query: 4    AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
             +  H  ++K G   + +    L+++Y +   ++ A ++F+ + D N+V W C+ SGY  
Sbjct: 179  GRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVK 238

Query: 64   KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
             G+  EA  +F+ M   G   +  A  +V+      G              LK       
Sbjct: 239  AGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK-------------LKD------ 279

Query: 124  LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
                               AR +F E+ + D+++WN +IS + +RG      + F  M++
Sbjct: 280  -------------------ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRK 320

Query: 184  EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
                 S+K    T GS+++A    +++   L   + A   K GL S++YVGS+LVS +++
Sbjct: 321  S----SVKSTRSTLGSVLSAI--GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374

Query: 244  LGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------------- 272
                  A K+FE + +KN V  N ++ G                                
Sbjct: 375  CEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSL 434

Query: 273  ----------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                        G + H  +I+  L   + VGN LV+MYAKCG ++D+R +F  M  +D+
Sbjct: 435  LSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDN 494

Query: 323  VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
            V+WNT+I    Q+    EA   F  M   G++S    L STL +C  +  +  G+Q+H  
Sbjct: 495  VTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCL 554

Query: 383  GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
             +K GLD D+   ++L+ +Y+  G +    KVF  +PE   VS N++I  ++ +   + E
Sbjct: 555  SVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN--LEE 612

Query: 443  AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT-IENALL 501
            AV  + +M   G +P+ +TF  I+ A        LG Q H Q+ K   ++E   +  +LL
Sbjct: 613  AVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLL 672

Query: 502  SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
              Y     M +   +F+ +S  +  V W  M+SG+  N    +A+     M   G   D 
Sbjct: 673  GMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQ 732

Query: 562  FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
             TF TVL  C+ +++L  G  +H+       + D +  + L+DMY+KCG +  +S+ FD 
Sbjct: 733  ATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDE 792

Query: 622  MPVR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
            M  R NV SWNS+I+GYA++G+ + AL +F  M+    +PD +TF+GVL+ACSHAG V +
Sbjct: 793  MRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSD 852

Query: 681  GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC 740
            G K F+ M   YG+  +++  +CMVDLLGR G L + ++FI    + P++ +W ++LGA 
Sbjct: 853  GRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGA- 911

Query: 741  CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKE 800
            CR +      G  +A  L E+EPQN+  YVLL+N+YAS G WE     RK M++  VKK 
Sbjct: 912  CRIHGDDIR-GEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKV 970

Query: 801  AGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
             G SW+ ++   H+F AGD+SH E   I   L++L   M+D   V
Sbjct: 971  PGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAVV 1015



 Score =  252 bits (643), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 188/687 (27%), Positives = 319/687 (46%), Gaps = 60/687 (8%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++A L   ++   G   D     T+IN Y+R+G L  A  LF EM   + V+W  ++SG+
Sbjct: 243 EEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGH 302

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
             +G    A + F  M ++     R  LGSVL A      +    G+ VH   +K     
Sbjct: 303 GKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV--ANLDLGLVVHAEAIKLGLAS 360

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V + L++MY  C E  + A ++FE +E ++ + WN++I  Y+  G++  V +LF  M
Sbjct: 361 NIYVGSSLVSMYSKC-EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419

Query: 182 QREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           +  G+      +++TF SL++  AA   +  GS    Q  +++ K  L  +L+VG+ALV 
Sbjct: 420 KSSGYNI----DDFTFTSLLSTCAASHDLEMGS----QFHSIIIKKKLAKNLFVGNALVD 471

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLM------------------------------ 269
            +A+ G    AR+IFE+M  ++ V+ N ++                              
Sbjct: 472 MYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGAC 531

Query: 270 -----------EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                       G  +GK+VH   ++ GL   +  G+ L++MY+KCG I D+R VF  + 
Sbjct: 532 LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
               VS N +I+G  QN   EEA++ F  M   G+  S  +  + + +C     + LG Q
Sbjct: 592 EWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ 650

Query: 379 IHGEGLKLGLDSDVS-VSNALLSLYADA-GYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
            HG+  K G  S+   +  +LL +Y ++ G    C     L      V W  ++   + +
Sbjct: 651 FHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQN 710

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
                EA+K+Y +MR  G  P+  TF+ +L   S  S  + G  +H+ +       +   
Sbjct: 711 -GFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELT 769

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
            N L+  Y KCG+M    ++F  M  R + VSWNS+I+GY  N     A+ +   M Q  
Sbjct: 770 SNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSH 829

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGV-RACLEFDVVIGSALVDMYSKCGRIDYA 615
              D  TF  VL+AC+    +  G ++    + +  +E  V   + +VD+  + G +  A
Sbjct: 830 IMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEA 889

Query: 616 SRFFDLMPVR-NVYSWNSMISGYARHG 641
             F +   ++ +   W+S++     HG
Sbjct: 890 DDFIEAQNLKPDARLWSSLLGACRIHG 916



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 166/666 (24%), Positives = 291/666 (43%), Gaps = 123/666 (18%)

Query: 71  CKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLI 130
           CK+FK       +  R AL               + G  VH   L      +G + N ++
Sbjct: 56  CKLFKSRKVFDEMPQRLALA-------------LRIGKAVHSKSLILGIDSEGRLGNAIV 102

Query: 131 AMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSL 190
            +Y  C +    A + F+ +E +D+ +WNS++S+                          
Sbjct: 103 DLYAKCAQ-VSYAEKQFDFLE-KDVTAWNSMLSM-------------------------- 134

Query: 191 KPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
                         YSS+     +L+  +++ +   +  + +  S ++S  AR  N  + 
Sbjct: 135 --------------YSSIGKPGKVLRSFVSLFENQ-IFPNKFTFSIVLSTCARETNVEF- 178

Query: 251 RKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDS 310
                                   G+++H  +I+ GL      G  LV+MYAKC  I D+
Sbjct: 179 ------------------------GRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDA 214

Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
           R VF +++  ++V W  + SG  + G  EEA++ F  MR +G    + + ++ +++   L
Sbjct: 215 RRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRL 274

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
           G +   + + GE                                   M   D V+WN +I
Sbjct: 275 GKLKDARLLFGE-----------------------------------MSSPDVVAWNVMI 299

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
                     + A++Y+ +MR++       T  ++L+A    +   LG  VHA+ IK  +
Sbjct: 300 SGHG-KRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGL 358

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
           A+   + ++L+S Y KC +M+   K+F  + E+ D V WN+MI GY HN    K M L  
Sbjct: 359 ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND-VFWNAMIRGYAHNGESHKVMELFM 417

Query: 551 FMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCG 610
            M   G  +D FTF ++LS CA+   LE G + H+  ++  L  ++ +G+ALVDMY+KCG
Sbjct: 418 DMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG 477

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
            ++ A + F+ M  R+  +WN++I  Y +  +  +A  LF +M L G + D       L 
Sbjct: 478 ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLK 537

Query: 671 ACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP----I 726
           AC+H   + +G K    +S   GL   L   S ++D+  + G +    +  + +P    +
Sbjct: 538 ACTHVHGLYQG-KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVV 596

Query: 727 TPNSLI 732
           + N+LI
Sbjct: 597 SMNALI 602



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 170/376 (45%), Gaps = 35/376 (9%)

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           ++G  VH++ +   + +E  + NA++  Y KC ++   EK F  +   +D  +WNSM+S 
Sbjct: 77  RIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL--EKDVTAWNSMLSM 134

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
           Y       K +     + +     + FTF+ VLS CA    +E G ++H   ++  LE +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
              G ALVDMY+KC RI  A R F+ +   N   W  + SGY + G  ++A+ +F +M+ 
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254

Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG-EL 714
           +G  PDH+ FV V++     G + +    F  MS      P +  ++ M+   G+ G E 
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCET 309

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
             IE F N    +  S   R+ LG+   A      +G  A   L  +    A+   L +N
Sbjct: 310 VAIEYFFNMRKSSVKST--RSTLGSVLSA------IGIVANLDLGLVVHAEAIKLGLASN 361

Query: 775 MYASG------GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
           +Y          K E +  A K  +  E K +    W  M  G   +    ESH      
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDV--FWNAMIRG---YAHNGESH------ 410

Query: 829 YEKLKELNQKMRDAGY 844
             K+ EL   M+ +GY
Sbjct: 411 --KVMELFMDMKSSGY 424


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 251/669 (37%), Positives = 385/669 (57%), Gaps = 12/669 (1%)

Query: 273 RKGKEVHGYLIRSG-LFDMVAVGNGLVNMYAKCGTI-DDSRSVFRF--MIGKDSVSWNTM 328
           R   ++H  LI+SG L       + L+   A   T+   + S+FR        +  +N +
Sbjct: 30  RYLPQLHAALIKSGELTGSPKCFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVL 89

Query: 329 ISGLDQNGCYEEAIMNFCAMRR-DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           +  L   G  E+A+  F  M     +     ++   L SC+ +  + +G+ I    +K G
Sbjct: 90  MRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRG 149

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
           L +D  V ++L+ +YA    ++    +F  + E+  V WN++I A+  +   + E V+ +
Sbjct: 150 LMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWM-EVVEMF 208

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
             M   G + + +T ++++ A       KLG  V   V +  +     +  AL+  Y KC
Sbjct: 209 KGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKC 268

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
           GE+    ++F  M + RD V+W++MISGY   +   +A+ L   M       +  T  +V
Sbjct: 269 GELGKARRLFDGM-QSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSV 327

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           LSACA +  LE G  VH+   R  L   +++G+ALVD Y+KCG ID A   F+ MPV+N 
Sbjct: 328 LSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNS 387

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
           ++W ++I G A +G G +AL LFS M+     P  VTF+GVL ACSH+ LV+EG +HF S
Sbjct: 388 WTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDS 447

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           M+Q YG+ P+ E + C+VDLLGRAG +D+  +FI  MPI PN++IWR +L +C  A  + 
Sbjct: 448 MTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSC--AVHKN 505

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
            E+G +A   +  + P ++ +Y+LL+N+YAS G+W++ A  RK MK+  ++K  GCS + 
Sbjct: 506 VEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIE 565

Query: 808 MKDGVHV-FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSY 866
           + DGV V F A D  HP+   IY+K++E+  +++ AGY+P T     +++   KE  VS+
Sbjct: 566 L-DGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEKEVSVSH 624

Query: 867 HSEKIAVAFVLTR-NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFND 925
           HSEK+A+AF L + +    IR+ KNLRVC DCHSA K ISK+  REIV+RD NRFHHF D
Sbjct: 625 HSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDRNRFHHFKD 684

Query: 926 GKCSCGDYW 934
           G CSC DYW
Sbjct: 685 GTCSCNDYW 693



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 108/447 (24%), Positives = 196/447 (43%), Gaps = 59/447 (13%)

Query: 36  LASASKLFDEMPDRNSVSWAC---IVSGYTHKGMSNEACKMFKEMVR-AGFLLNRYALGS 91
           L  A  LF   P R  +S  C   ++    H G   +A  +F EM+  A    +++ +  
Sbjct: 66  LPYAVSLFRLGP-RPPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVAC 124

Query: 92  VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE 151
            L++C          G+Q +   +K     D  V + LI MY SC      A+ +F+ +E
Sbjct: 125 ALKSCSRMCTLDVGRGIQAY--AVKRGLMADRFVLSSLIHMYASC-RDVAAAQLLFDAVE 181

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
              ++ WN+II+ Y + G+ + V ++F  M   G  +    +E T  S++TA     +  
Sbjct: 182 ENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAF----DEITLVSVVTAC--GRIGD 235

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           + L + +   V + GL+ +  + +AL+  +A+ G    AR++F+ M  ++VV+ + ++ G
Sbjct: 236 AKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISG 295

Query: 272 RRK-----------------------------------------GKEVHGYLIRSGLFDM 290
             +                                         GK VH Y+ R  L   
Sbjct: 296 YTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLT 355

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           + +G  LV+ YAKCG IDD+   F  M  K+S +W  +I G+  NG   EA+  F +MR+
Sbjct: 356 IILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRK 415

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK--LGLDSDVSVSNALLSLYADAGYL 408
             +  ++ + I  L +C+    +  G++ H + +    G+         ++ L   AG +
Sbjct: 416 ASIEPTDVTFIGVLMACSHSCLVEEGRR-HFDSMTQDYGIKPRAEHYGCVVDLLGRAGLI 474

Query: 409 SRCLKVFFLMP-EHDQVSWNSVIGAFA 434
               +    MP E + V W +++ + A
Sbjct: 475 DEAYQFIRTMPIEPNAVIWRALLSSCA 501



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 149/311 (47%), Gaps = 12/311 (3%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRRKGKEVHGYLIR 284
           +A+++ + + GN+    ++F+ M++           +VV+  G +   + GK V  Y+  
Sbjct: 189 NAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDE 248

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
            GL     +   L++MYAKCG +  +R +F  M  +D V+W+ MISG  Q     EA+  
Sbjct: 249 KGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALAL 308

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F  M+   +  ++ +++S LS+CA LG +  G+ +H    +  L   + +  AL+  YA 
Sbjct: 309 FSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAK 368

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
            G +   ++ F  MP  +  +W ++I   A +     EA++ +  MR+A   P  VTFI 
Sbjct: 369 CGCIDDAVEAFESMPVKNSWTWTALIKGMA-TNGRGREALELFSSMRKASIEPTDVTFIG 427

Query: 465 ILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           +L A S   + + G +   +    Y +         ++   G+ G +D+  +    M   
Sbjct: 428 VLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIE 487

Query: 524 RDEVSWNSMIS 534
            + V W +++S
Sbjct: 488 PNAVIWRALLS 498



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 164/362 (45%), Gaps = 52/362 (14%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           +K G   D F+ ++LI++Y    D+A+A  LFD + +   V W  I++ Y   G   E  
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVV 205

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
           +MFK M+  G   +   L SV+ AC   G +  K G  V   V +     +  +   LI 
Sbjct: 206 EMFKGMLEVGVAFDEITLVSVVTACGRIGDA--KLGKWVAEYVDEKGLVRNRNLMTALID 263

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY  C E    ARR+F+ +++RD+++W+++IS Y+Q         LFS MQ       ++
Sbjct: 264 MYAKCGELGK-ARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLA----EVE 318

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           PN+ T  S+++A   +VL      + + + +++  L   + +G+ALV  +A+ G    A 
Sbjct: 319 PNDVTMVSVLSAC--AVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAV 376

Query: 252 KIFEQMIQKNVVSMNGLMEG---RRKGKEV---------------------------HGY 281
           + FE M  KN  +   L++G     +G+E                            H  
Sbjct: 377 EAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSC 436

Query: 282 LIRSGL--FDMVAVGNGL----------VNMYAKCGTIDDSRSVFRFM-IGKDSVSWNTM 328
           L+  G   FD +    G+          V++  + G ID++    R M I  ++V W  +
Sbjct: 437 LVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRAL 496

Query: 329 IS 330
           +S
Sbjct: 497 LS 498



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 12/123 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  I +   +  + L   L++ Y + G +  A + F+ MP +NS +W  ++ G    
Sbjct: 341 KWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATN 400

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   EA ++F  M +A           VL AC               CLV +  + FD +
Sbjct: 401 GRGREALELFSSMRKASIEPTDVTFIGVLMACSH------------SCLVEEGRRHFDSM 448

Query: 125 VSN 127
             +
Sbjct: 449 TQD 451


>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
 gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 595

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 235/571 (41%), Positives = 348/571 (60%), Gaps = 22/571 (3%)

Query: 377 QQIHGEGLKLGLDSDVSVSNA---------LLSLYADAGYLSRCLKVFFLMPEHDQV-SW 426
           +QIH   ++ G    VS+S+A         L+SL +    +S   KVF  + +   V  W
Sbjct: 34  RQIHAFSIRHG----VSISDAELGKHLIFYLVSLPSPPP-MSYAHKVFSKIEKPINVFIW 88

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGW-SPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           N++I  +A+    +S A   Y +MR +G   P+  T+  ++ A ++ +  +LG  +H+ V
Sbjct: 89  NTLIRGYAEIGNSIS-AFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
           I+    +   ++N+LL  Y  CG++    K+F +M E+ D V+WNS+I+G+  N    +A
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK-DLVAWNSVINGFAENGKPEEA 206

Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
           + L   M  +G + D FT  ++LSACA +  L  G  VH   ++  L  ++   + L+D+
Sbjct: 207 LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDL 266

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK-LDGPLPDHVT 664
           Y++CGR++ A   FD M  +N  SW S+I G A +G G +A+ LF  M+  +G LP  +T
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEIT 326

Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           FVG+L ACSH G+V EGF++F+ M + Y + P++E F CMVDLL RAG++ K  E+I  M
Sbjct: 327 FVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM 386

Query: 725 PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
           P+ PN +IWRT+LGAC       ++L   A   + ++EP ++ +YVLL+NMYAS  +W D
Sbjct: 387 PMQPNVVIWRTLLGACTVHG--DSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSD 444

Query: 785 VAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGY 844
           V K RK M    VKK  G S V + + VH F+ GD+SHP+ D IY KLKE+  ++R  GY
Sbjct: 445 VQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGY 504

Query: 845 VPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL-TRNSKLPIRIMKNLRVCGDCHSAFKF 903
           VPQ      D+E E KE+ V YHSEKIA+AF+L +   + PI ++KNLRVC DCH A K 
Sbjct: 505 VPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKL 564

Query: 904 ISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +SK+  REIV+RD +RFHHF +G CSC DYW
Sbjct: 565 VSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 161/318 (50%), Gaps = 16/318 (5%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG-----------LMEGRRKGKEV 278
           ++++ + L+ G+A +GN   A  ++ +M    +V  +             M   R G+ +
Sbjct: 84  NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H  +IRSG   ++ V N L+++YA CG +  +  VF  M  KD V+WN++I+G  +NG  
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           EEA+  +  M   G+    F+++S LS+CA +G + LG+++H   +K+GL  ++  SN L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA-GWSP 457
           L LYA  G +     +F  M + + VSW S+I   A       EA++ +  M    G  P
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA-VNGFGKEAIELFKYMESTEGLLP 322

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEK 515
             +TF+ IL A S   M K G + + + ++     E  IE+   ++    + G++    +
Sbjct: 323 CEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE 381

Query: 516 IFARMSERRDEVSWNSMI 533
               M  + + V W +++
Sbjct: 382 YIKSMPMQPNVVIWRTLL 399



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 108/198 (54%), Gaps = 8/198 (4%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +++ GF   +++ N+L+++Y   GD+ASA K+FD+MP+++ V+W  +++G+   G 
Sbjct: 143 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 202

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA  ++ EM   G   + + + S+L AC + G      G +VH  ++K   T +   S
Sbjct: 203 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG--ALTLGKRVHVYMIKVGLTRNLHSS 260

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ-REG 185
           NVL+ +Y  C    + A+ +F+E+  ++ +SW S+I   +  G      +LF  M+  EG
Sbjct: 261 NVLLDLYARC-GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 319

Query: 186 FRYSLKPNEYTFGSLITA 203
               L P E TF  ++ A
Sbjct: 320 ----LLPCEITFVGILYA 333



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 144/291 (49%), Gaps = 18/291 (6%)

Query: 36  LASASKLFDEMPDR-NSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL-LNRYALGSVL 93
           ++ A K+F ++    N   W  ++ GY   G S  A  +++EM  +G +  + +    ++
Sbjct: 69  MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128

Query: 94  RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
           +A      +  + G  +H +V++S       V N L+ +Y +C +    A ++F+++  +
Sbjct: 129 KAVTTM--ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVAS-AYKVFDKMPEK 185

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY 213
           DL++WNS+I+ +++ G       L++ M  +G    +KP+ +T  SL++A   + +    
Sbjct: 186 DLVAWNSVINGFAENGKPEEALALYTEMNSKG----IKPDGFTIVSLLSAC--AKIGALT 239

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR- 272
           L +++   + K GL  +L+  + L+  +AR G    A+ +F++M+ KN VS   L+ G  
Sbjct: 240 LGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 299

Query: 273 -----RKGKEVHGYLIRS-GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                ++  E+  Y+  + GL        G++   + CG + +    FR M
Sbjct: 300 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM 350



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 24/212 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H+ ++K G   ++   N L+++Y R G +  A  LFDEM D+NSVSW  ++ G    
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301

Query: 65  GMSNEACKMFKEMVRA-GFLLNRYALGSVLRACQECG--PSGFKF--GMQVHCLVLKSNQ 119
           G   EA ++FK M    G L        +L AC  CG    GF++   M+    +    +
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 361

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIET----RDLISWNSIISVYSQRGDTISVF 175
            F  +V   L+A  G         ++ +E I++     +++ W +++   +  GD  S  
Sbjct: 362 HFGCMVD--LLARAGQ-------VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGD--SDL 410

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITAAYSS 207
             F+R+Q       L+PN      L++  Y+S
Sbjct: 411 AEFARIQ----ILQLEPNHSGDYVLLSNMYAS 438


>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
          Length = 702

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/676 (37%), Positives = 386/676 (57%), Gaps = 18/676 (2%)

Query: 273 RKGKEVHGYLIRSGLFD--MVAVGNGLVNMYAKCGTIDDSRSVFRFMI-GK-DSVSWNTM 328
           R G+E H + +++GL         N L++MYA+ G + D++ +F     G+ D V+WNTM
Sbjct: 31  RLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTM 90

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG- 387
           +S L Q+G ++EA+     M   G+     +  S L +C+ L  + +G+++H   +K   
Sbjct: 91  VSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDE 150

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV--SWNSVIGAFADSEALVSEAVK 445
           L ++  V++AL+ +YA    + +  +VF ++P+  +    WN++I  +A +  +  EA++
Sbjct: 151 LAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQA-GMDEEALR 209

Query: 446 YYLDMR-RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
            +  M   AG+ P   T  ++L A +          VH  V+K  +A    ++NAL+  Y
Sbjct: 210 LFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMY 269

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR---GQRLDH 561
            + G+ D   +IFA M +  D VSWN++I+G +    +  A  L   M Q    G   + 
Sbjct: 270 ARLGKTDVARRIFA-MVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNA 328

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
            T  T+L  CA +A   RG E+H   VR  L+ DV +GSALVDMY+KCG +  +   FD 
Sbjct: 329 ITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDR 388

Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDE 680
           +P RN  +WN +I  Y  HG G +A  LF +M   G   P+ VTF+  L+ACSH+G+VD 
Sbjct: 389 LPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDR 448

Query: 681 GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL-IWRTVLGA 739
           G + F +M + +G+ P  +  +C+VD+LGRAG LD+    +  M      +  W T+LGA
Sbjct: 449 GLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGA 508

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKK 799
           C R + R   LG  A   L E+EP+ A +YVLL N+Y++ G+W   A+ R  M+   V K
Sbjct: 509 C-RLH-RNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAK 566

Query: 800 EAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES 859
           E GCSW+ +   +H F+AG+ +HP  + ++  ++ L  +M   GY P T   L D++   
Sbjct: 567 EPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGD 626

Query: 860 KEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSN 918
           K  ++  HSEK+A+AF L R +    IR+ KNLRVC DCH A KF+SK+VGREIVLRD  
Sbjct: 627 KAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVR 686

Query: 919 RFHHFNDGKCSCGDYW 934
           RFHHF +G+CSCGDYW
Sbjct: 687 RFHHFRNGQCSCGDYW 702



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 220/481 (45%), Gaps = 65/481 (13%)

Query: 8   HLQILKHGF--AYDVFLCNTLINVYVRVGDLASASKLF-DEMPDR-NSVSWACIVSGYTH 63
           H   LK+G    +  F  N L+++Y R+G +A A +LF    P R + V+W  +VS    
Sbjct: 37  HAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQ 96

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-TFD 122
            GM +EA +   +MV  G   +     S L AC          G ++H  V+K ++   +
Sbjct: 97  SGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRL--ELLDVGREMHAYVIKDDELAAN 154

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIET--RDLISWNSIISVYSQRGDTISVFKLFSR 180
             V++ L+ MY +  E    AR++F+ +    + L  WN++I  Y+Q G      +LF+R
Sbjct: 155 SFVASALVDMYAT-HEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFAR 213

Query: 181 MQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           M+ E       P E T  S++ A A S   +G    + +   V K G+  + +V +AL+ 
Sbjct: 214 MEAEA---GFVPCETTMASVLPACARSEAFAGK---EAVHGYVVKRGMAGNRFVQNALMD 267

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------------------------- 271
            +ARLG    AR+IF  +   +VVS N L+ G                            
Sbjct: 268 MYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPN 327

Query: 272 ----------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                             +GKE+HGY +R  L   VAVG+ LV+MYAKCG +  SR+VF 
Sbjct: 328 AITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFD 387

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIM 374
            +  +++++WN +I     +G   EA + F  M   G    N  + ++ L++C+  G + 
Sbjct: 388 RLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVD 447

Query: 375 LGQQI-HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ--VSWNSVIG 431
            G Q+ H      G++    +   ++ +   AG L     +   M   +Q   +W++++G
Sbjct: 448 RGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLG 507

Query: 432 A 432
           A
Sbjct: 508 A 508



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 14/278 (5%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K G A + F+ N L+++Y R+G    A ++F  +   + VSW  +++G   +G  
Sbjct: 247 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 306

Query: 68  NEACKMFKEMVR---AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            +A ++ +EM +    G + N   L ++L  C          G ++H   ++     D  
Sbjct: 307 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPA--RGKEIHGYAVRHALDTDVA 364

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V + L+ MY  C      +R +F+ +  R+ I+WN +I  Y   G       LF RM   
Sbjct: 365 VGSALVDMYAKC-GCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTAS 423

Query: 185 GFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           G     +PNE TF  +L   ++S ++     LQ   AM +  G+     + + +V    R
Sbjct: 424 G---EARPNEVTFMAALAACSHSGMVDRG--LQLFHAMERDHGVEPTPDILACVVDILGR 478

Query: 244 LGNFYYARKIFEQMI--QKNVVSMNGLMEGRRKGKEVH 279
            G    A  +   M   ++ V + + ++   R  + VH
Sbjct: 479 AGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVH 516



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   ++H    DV + + L+++Y + G LA +  +FD +P RN+++W  ++  Y   
Sbjct: 348 KEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMH 407

Query: 65  GMSNEACKMFKEMVRAG-FLLNRYALGSVLRACQECG 100
           G+  EA  +F  M  +G    N     + L AC   G
Sbjct: 408 GLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSG 444


>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Glycine max]
          Length = 618

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 227/573 (39%), Positives = 343/573 (59%), Gaps = 6/573 (1%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L  CA     M G+  H + +++GL+ D+  SN L+++Y+    +    K F  MP    
Sbjct: 50  LQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSL 109

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSWN+VIGA   + A   EA+K  + M+R G   N  T  ++L   +         Q+HA
Sbjct: 110 VSWNTVIGALTQN-AEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHA 168

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
             IK  + +   +  ALL  Y KC  + D  ++F  M E+ + V+W+SM++GY+ N    
Sbjct: 169 FSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEK-NAVTWSSMMAGYVQNGFHE 227

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +A+ +       G   D F  ++ +SACA +ATL  G +VHA   ++    ++ + S+L+
Sbjct: 228 EALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLI 287

Query: 604 DMYSKCGRIDYASRFFD-LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           DMY+KCG I  A   F  ++ VR++  WN+MISG+ARH    +A+ LF +M+  G  PD 
Sbjct: 288 DMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDD 347

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFIN 722
           VT+V VL+ACSH GL +EG K+F  M + + L P +  +SCM+D+LGRAG + K  + I 
Sbjct: 348 VTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIE 407

Query: 723 KMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKW 782
           +MP    S +W ++L +C        E    AA  LFEMEP NA N++LLAN+YA+  KW
Sbjct: 408 RMPFNATSSMWGSLLASCKIYG--NIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKW 465

Query: 783 EDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDA 842
           ++VA+ARK ++E +V+KE G SW+ +K+ +H F  G+ +HP+ D IY KL  L  +++  
Sbjct: 466 DEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKL 525

Query: 843 GYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAF 901
            Y   T   L D+E   K+ L+ +HSEK+A+ F ++     +PIRI+KNLR+CGDCH+  
Sbjct: 526 NYKVDTSNDLHDVEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFM 585

Query: 902 KFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           K +SK   REI++RD+NRFHHF DG CSCG++W
Sbjct: 586 KLVSKSTSREIIVRDTNRFHHFKDGFCSCGEFW 618



 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 203/426 (47%), Gaps = 18/426 (4%)

Query: 222 VKKAGLLSDLYVGSALVSGFA---RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEV 278
           ++K  ++S+    S+ V       R+ N +Y      Q+  K   SM G        +  
Sbjct: 18  IRKLTVISEAKPESSKVENVVHIDRVSNLHY----LLQLCAKTRSSMGG--------RAC 65

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H  +IR GL   +   N L+NMY+KC  +D +R  F  M  K  VSWNT+I  L QN   
Sbjct: 66  HAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAED 125

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
            EA+     M+R+G   + F++ S L +CA    I+   Q+H   +K  +DS+  V  AL
Sbjct: 126 REALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTAL 185

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           L +YA    +    ++F  MPE + V+W+S++  +  +     EA+  + + +  G+  +
Sbjct: 186 LHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQN-GFHEEALLIFRNAQLMGFDQD 244

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
                + ++A +  +    G QVHA   K    +   + ++L+  Y KCG + +   +F 
Sbjct: 245 PFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQ 304

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
            + E R  V WN+MISG+  +   P+AM L   M QRG   D  T+  VL+AC+ +   E
Sbjct: 305 GVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHE 364

Query: 579 RGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISG 636
            G +     VR   L   V+  S ++D+  + G +  A    + MP     S W S+++ 
Sbjct: 365 EGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLAS 424

Query: 637 YARHGH 642
              +G+
Sbjct: 425 CKIYGN 430



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 167/352 (47%), Gaps = 33/352 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H QI++ G   D+   N LIN+Y +   + SA K F+EMP ++ VSW  ++   T     
Sbjct: 66  HAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAED 125

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFG----MQVHCLVLKSNQTFDG 123
            EA K+  +M R G   N + + SVL  C       FK      MQ+H   +K+    + 
Sbjct: 126 REALKLLIQMQREGTPFNEFTISSVLCNC------AFKCAILECMQLHAFSIKAAIDSNC 179

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V   L+ +Y  C    D A ++FE +  ++ ++W+S+++ Y Q G       +F   Q 
Sbjct: 180 FVGTALLHVYAKCSSIKD-ASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQL 238

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ--QILAMVKKAGLLSDLYVGSALVSGF 241
            GF      ++  F  +I++A S+    + L++  Q+ A+  K+G  S++YV S+L+  +
Sbjct: 239 MGF------DQDPF--MISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMY 290

Query: 242 ARLGNFYYARKIFEQMIQ-KNVVSMNGLMEGRRKGKEVHGYLI------RSGLFDMVAVG 294
           A+ G    A  +F+ +++ +++V  N ++ G  +       +I      + G F      
Sbjct: 291 AKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTY 350

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEA 341
             ++N  +  G  ++ +  F  M+ + ++S     ++ MI  L + G   +A
Sbjct: 351 VCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKA 402



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%)

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           +L  CA   +   G   HA  +R  LE D++  + L++MYSKC  +D A + F+ MPV++
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
           + SWN++I    ++    +AL L  QM+ +G   +  T   VL  C+
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCA 155


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/718 (35%), Positives = 398/718 (55%), Gaps = 18/718 (2%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQM----------IQKNVVSMNGLMEGRRKGKEVH 279
           D ++ + ++ GF   G F+ A   + +M              V+   G +    +G+ VH
Sbjct: 90  DTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVH 149

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
           G +I+SGL   + +GN L+ MYAK G I+ +  VFR M  +D VSWN+MISG    G   
Sbjct: 150 GKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGW 209

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
            ++  F  M+  G+    FS+I  L +C+  G++  G++IH + ++  L+ DV V  +L+
Sbjct: 210 RSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLV 269

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG-WSPN 458
            +YA  G +    ++F  + +   V+WN++IG ++   A   E+  Y   M+  G   P+
Sbjct: 270 DMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYS-LNAQSFESFAYVRKMQEGGKLHPD 328

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
            +T IN+L   +      LG  VH   I+        +E AL+  YG+CG++   E +F 
Sbjct: 329 WITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFG 388

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
           +M+ER + +SWN+MI+ Y  N    KAM L   +  +  + D  T A++L A A +A+L 
Sbjct: 389 QMNER-NLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLR 447

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
              ++H    +  L+ +  + +++V MY KCG +  A   FD M  ++V SWN++I  YA
Sbjct: 448 EAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYA 507

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
            HG G  ++ LFS+M+  G  P+  TFV +L +CS AGLV+EG+++F SM + Y + P +
Sbjct: 508 IHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGI 567

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
           E + C++DL+GR G LD  + FI +MP+ P + IW ++L A    N    EL   AA  +
Sbjct: 568 EHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTAS--RNKGDVELAEIAAEHI 625

Query: 759 FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
             +E  N   YVLL+NMYA  G+WEDV + +  MK+  ++K  GCS V +      FV  
Sbjct: 626 LSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQ 685

Query: 819 DESHPEKDLIYEKLKELNQKMRDAGYVPQ-TKFALFDLEPESKEDLVSYHSEKIAVAFVL 877
           D S  E +++Y+ L  +++K+ +  YV   TKF   DLE + + +    HS ++A+ F L
Sbjct: 686 DRSDNEINMVYDVLDIISKKIGEDVYVHSLTKFRPSDLE-KKRANSAKSHSLRLAICFGL 744

Query: 878 TRNS-KLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
              +   P+ + KN+R+C  CH   K IS+   REI++RDS  FHHFN G CSCGDYW
Sbjct: 745 ISTTIGNPVLVRKNIRICEACHRFAKRISETTKREIIVRDSKIFHHFNGGHCSCGDYW 802



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 225/447 (50%), Gaps = 19/447 (4%)

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           Y + G + ++  +F  M   D+  WN MI G   NG + +A+  +  M   G+   NF+ 
Sbjct: 70  YVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTY 129

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
              + +C  L  +  G+++HG+ +K GLD D+ + N+L+ +YA  G +     VF  MP 
Sbjct: 130 PFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPV 189

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            D VSWNS+I  +  S      ++  + +M+ +G   +  + I IL A S     + G +
Sbjct: 190 RDLVSWNSMISGYV-SVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKE 248

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +H Q+++  +  +  ++ +L+  Y KCG MD  E++F ++++ +  V+WN+MI GY  N 
Sbjct: 249 IHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITD-KSIVAWNAMIGGYSLNA 307

Query: 541 LLPKAMNLVWFMMQRGQRL--DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
              ++   V   MQ G +L  D  T   +L  CA +  +  G  VH   +R      +V+
Sbjct: 308 QSFESFAYVR-KMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVL 366

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            +ALVDMY +CG++  A   F  M  RN+ SWN+MI+ Y ++G   KA+TLF  +     
Sbjct: 367 ETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTL 426

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS------CMVDLLGRAG 712
            PD  T   +L A +    + E         Q++G + +L+  S       +V + G+ G
Sbjct: 427 KPDATTIASILPAYAELASLREA-------EQIHGYVTKLKLDSNTFVSNSIVFMYGKCG 479

Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGA 739
            L +  E  ++M    + + W TV+ A
Sbjct: 480 NLLRAREIFDRMTFK-DVISWNTVIMA 505



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 150/557 (26%), Positives = 251/557 (45%), Gaps = 63/557 (11%)

Query: 27  INVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNR 86
           ++ YV  G + +A  LF+ M   ++  W  ++ G+   G+  +A   +  M   G   + 
Sbjct: 67  LSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDN 126

Query: 87  YALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS--CLESTDCAR 144
           +    V++AC   G      G +VH  V+KS    D  + N LI MY    C+ES   A 
Sbjct: 127 FTYPFVIKACG--GLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIES---AE 181

Query: 145 RIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF---RYSLKPNEYTFGSLI 201
            +F E+  RDL+SWNS+IS Y   GD       F  MQ  G    R+S+       G L 
Sbjct: 182 MVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSV------IGILG 235

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
             +    L      ++I   + ++ L  D+ V ++LV  +A+ G   YA ++F+Q+  K+
Sbjct: 236 ACSLEGFLRNG---KEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKS 292

Query: 262 VVSMNGLMEGR-------------RK-----------------------------GKEVH 279
           +V+ N ++ G              RK                             GK VH
Sbjct: 293 IVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVH 352

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
           G+ IR+G    + +   LV+MY +CG +  +  +F  M  ++ +SWN MI+   +NG   
Sbjct: 353 GFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENR 412

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           +A+  F  +    L     ++ S L + A L  +   +QIHG   KL LDS+  VSN+++
Sbjct: 413 KAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIV 472

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
            +Y   G L R  ++F  M   D +SWN+VI A+A        +++ + +MR  G+ PNG
Sbjct: 473 FMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYA-IHGFGRISIELFSEMREKGFEPNG 531

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFA 518
            TF+++L + S   +   G +    + + YN+         +L   G+ G +D  +    
Sbjct: 532 STFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIE 591

Query: 519 RMSERRDEVSWNSMISG 535
            M        W S+++ 
Sbjct: 592 EMPLAPTARIWGSLLTA 608



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 193/412 (46%), Gaps = 49/412 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H +++K G   D+++ N+LI +Y ++G + SA  +F EMP R+ VSW  ++SGY   G  
Sbjct: 149 HGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDG 208

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
             +   F+EM  +G  L+R+++  +L AC   G    + G ++HC +++S    D +V  
Sbjct: 209 WRSLSCFREMQASGIKLDRFSVIGILGACSLEG--FLRNGKEIHCQMMRSRLELDVMVQT 266

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY  C    D A R+F++I  + +++WN++I  YS    +   F    +MQ  G  
Sbjct: 267 SLVDMYAKC-GRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGG-- 323

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             L P+  T  +L+     + L    L + +     + G L  L + +ALV  +   G  
Sbjct: 324 -KLHPDWITMINLLPPC--AQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKL 380

Query: 248 YYARKIFEQMIQKNVVSMNGLM-------EGR---------------------------- 272
             A  +F QM ++N++S N ++       E R                            
Sbjct: 381 KPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAY 440

Query: 273 ------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                 R+ +++HGY+ +  L     V N +V MY KCG +  +R +F  M  KD +SWN
Sbjct: 441 AELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWN 500

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
           T+I     +G    +I  F  MR  G   +  + +S L SC+  G +  G +
Sbjct: 501 TVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWE 552



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 147/283 (51%), Gaps = 18/283 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ K  H Q+++     DV +  +L+++Y + G +  A +LFD++ D++ V+W  ++ GY
Sbjct: 244 RNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGY 303

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRY-ALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           +    S E+    ++M   G L   +  + ++L  C +        G  VH   +++   
Sbjct: 304 SLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQL--EAILLGKSVHGFAIRNGFL 361

Query: 121 FDGLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              ++   L+ MYG C  L+  +C   +F ++  R+LISWN++I+ Y++ G+      LF
Sbjct: 362 PHLVLETALVDMYGECGKLKPAEC---LFGQMNERNLISWNAMIASYTKNGENRKAMTLF 418

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
             +  +    +LKP+  T  S++  AY+  L+     +QI   V K  L S+ +V +++V
Sbjct: 419 QDLCNK----TLKPDATTIASIL-PAYAE-LASLREAEQIHGYVTKLKLDSNTFVSNSIV 472

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY 281
             + + GN   AR+IF++M  K+V+S N ++        +HG+
Sbjct: 473 FMYGKCGNLLRAREIFDRMTFKDVISWNTVI----MAYAIHGF 511



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 156/337 (46%), Gaps = 17/337 (5%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H   +++GF   + L   L+++Y   G L  A  LF +M +RN +SW  +++ YT 
Sbjct: 348 GKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTK 407

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G + +A  +F+++       +   + S+L A  E   +  +   Q+H  V K     + 
Sbjct: 408 NGENRKAMTLFQDLCNKTLKPDATTIASILPAYAEL--ASLREAEQIHGYVTKLKLDSNT 465

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            VSN ++ MYG C      AR IF+ +  +D+ISWN++I  Y+  G      +LFS M+ 
Sbjct: 466 FVSNSIVFMYGKCGNLLR-AREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMRE 524

Query: 184 EGFRYSLKPNEYTFGS-LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           +GF    +PN  TF S L++ + + +++  +  +   +M +   +   +     ++    
Sbjct: 525 KGF----EPNGSTFVSLLLSCSVAGLVNEGW--EYFNSMKRDYNINPGIEHYGCILDLIG 578

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNG--LMEGRRKGK----EVHGYLIRSGLFDMVAVGNG 296
           R GN  +A+   E+M       + G  L   R KG     E+    I S   D       
Sbjct: 579 RTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVL 638

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           L NMYA+ G  +D   + +F + K+ +  +   S +D
Sbjct: 639 LSNMYAEAGRWEDVERI-KFHMKKEGLEKSVGCSVVD 674



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 23/181 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++A+  H  + K     + F+ N+++ +Y + G+L  A ++FD M  ++ +SW  ++  Y
Sbjct: 447 REAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAY 506

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G    + ++F EM   GF  N     S+L +C   G            LV +  + F
Sbjct: 507 AIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAG------------LVNEGWEYF 554

Query: 122 DGLVS----NVLIAMYGSCLE------STDCARRIFEEIETRDLIS-WNSIISVYSQRGD 170
           + +      N  I  YG  L+      + D A+   EE+        W S+++    +GD
Sbjct: 555 NSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGD 614

Query: 171 T 171
            
Sbjct: 615 V 615


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/695 (35%), Positives = 384/695 (55%), Gaps = 43/695 (6%)

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD---SRSVFRFMIGKDSVSWNTMISGLDQ 334
           +H  +I++GL +     + L+ +       D    + SVF  +   + + WNTM  G   
Sbjct: 52  IHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 111

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +     A+  +  M   GL+ ++++    L SCA       GQQIHG  LKLG D D+ V
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFV 171

Query: 395 SNALLSLY-------------------------------ADAGYLSRCLKVFFLMPEHDQ 423
             +L+S+Y                               A  GY+    K+F  +P  D 
Sbjct: 172 HTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDV 231

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSWN++I  +A++     EA++ + +M +    P+  T + +++A +     +LG QVH+
Sbjct: 232 VSWNAMISGYAET-GNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHS 290

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
            +  +   +   I N+L+  Y KCGE++    +F  +   +D +SWN++I GY H  L  
Sbjct: 291 WIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLL-YKDVISWNTLIGGYTHMNLYK 349

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV--IGSA 601
           +A+ L   M++ G+R +  T  ++L ACA +  ++ G  +H    +          + ++
Sbjct: 350 EALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTS 409

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+DMY+KCG I+ A + F+ +  +++ SWN+MI G+A HG  D A  +FS+M+  G  PD
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPD 469

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            +TFVG+LSACS +G++D G   F++M+Q Y + P+LE + CM+DLLG +G   + EE I
Sbjct: 470 DITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 529

Query: 722 NKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           N M + P+ +IW ++L AC  R N    ELG   A  L ++EP+N   YVLL+N+YA+ G
Sbjct: 530 NNMEMEPDGVIWCSLLKACKIRGN---VELGESFAQNLIKIEPENPGCYVLLSNIYATAG 586

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
           +W +VAK R  + +  +KK  GCS + +   VH F+ GD+ HP    IY  L+E+   + 
Sbjct: 587 RWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLE 646

Query: 841 DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHS 899
            AG+VP T   L ++E E KE  + +HSEK+A+AF +++      + I+KNLRVC +CH 
Sbjct: 647 KAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHE 706

Query: 900 AFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           A K ISKI  REI+ RD  RFHHF DG CSC DYW
Sbjct: 707 ATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 212/467 (45%), Gaps = 69/467 (14%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLA------------------------ 37
           K+ +  H  +LK G+  D+F+  +LI+VYV+ G L                         
Sbjct: 151 KEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGY 210

Query: 38  -------SASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
                  SA KLFDE+P ++ VSW  ++SGY   G   EA ++FKEM++     +   + 
Sbjct: 211 ASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMV 270

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE-STDCARRIFEE 149
           +V+ AC + G    + G QVH  +       +  + N L+ +Y  C E  T C   +FE 
Sbjct: 271 TVVSACAQSG--SIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACG--LFEG 326

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA--YSS 207
           +  +D+ISWN++I  Y+          LF  M R G R    PN+ T  S++ A     +
Sbjct: 327 LLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGER----PNDVTMLSILPACAHLGA 382

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
           +  G ++   I   +K A   S L   ++L+  +A+ G+   A ++F  ++ K++ S N 
Sbjct: 383 IDIGRWIHVYIDKRLKSATNASSLR--TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 440

Query: 268 L-----MEGRRKGK-EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
           +     M GR     ++   + + G+        GL++  ++ G +D  R +FR M    
Sbjct: 441 MIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDY 500

Query: 322 SVS-----WNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
            ++     +  MI  L  +G ++EA  ++N   M  DG++       S L +C   G + 
Sbjct: 501 KITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVI-----WCSLLKACKIRGNVE 555

Query: 375 LGQQIHGEGLKLGLDSD---VSVSNALLSLYADAGYLSRCLKVFFLM 418
           LG+      +K+  ++    V +SN    +YA AG  +   K+  L+
Sbjct: 556 LGESFAQNLIKIEPENPGCYVLLSN----IYATAGRWNEVAKIRALL 598



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/452 (24%), Positives = 196/452 (43%), Gaps = 86/452 (19%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYV---RVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +L H Q++K G     +  + L+ + V       L  A  +F+ + + N + W  +  G+
Sbjct: 50  RLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 109

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                   A K++  M+  G L N Y    +L++C +     FK G Q+H  VLK     
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKS--KAFKEGQQIHGHVLKLGYDL 167

Query: 122 DGLVSNVLIAMY--GSCLEST----------------------------DCARRIFEEIE 151
           D  V   LI++Y     LE                              + A+++F+EI 
Sbjct: 168 DLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIP 227

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
            +D++SWN++IS Y++ G+     +LF  M +   R    P+E T  ++++A      SG
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIR----PDESTMVTVVSACAQ---SG 280

Query: 212 SYLL-QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM- 269
           S  L +Q+ + +   G  S+L + ++L+  +++ G    A  +FE ++ K+V+S N L+ 
Sbjct: 281 SIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIG 340

Query: 270 --------------------EGRRK--------------------GKEVHGYLIR--SGL 287
                                G R                     G+ +H Y+ +     
Sbjct: 341 GYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSA 400

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
            +  ++   L++MYAKCG I+ +  VF  ++ K   SWN MI G   +G  + A   F  
Sbjct: 401 TNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSR 460

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           MR+ G+   + + +  LS+C+  G + LG+ I
Sbjct: 461 MRKIGIEPDDITFVGLLSACSRSGMLDLGRHI 492


>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
 gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
          Length = 913

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/683 (35%), Positives = 381/683 (55%), Gaps = 24/683 (3%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R G ++HG L + G      +GN L++MYAKCG +D +  VF  M  ++ VSW  ++ G 
Sbjct: 234 RGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNVVSWTALMVGF 293

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
            Q+G     +     MR     + N ++L ++L +C     +  G  IHG  ++ G +  
Sbjct: 294 LQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYEEH 353

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADS-----EALVSEAVK 445
             V+++L+ LY+  G +    +VF          +WN++I  +A +       LV   ++
Sbjct: 354 YVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHGRDALLVFREMR 413

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTIENALLSC 503
                      P+  TF ++L A       + G QVHA +    ++ A+   +  AL+  
Sbjct: 414 RRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDM 473

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           Y KCG +    ++F R+ ER++ + W +++ G+     + +A+ L     + G R D   
Sbjct: 474 YVKCGRLPVAMQVFERL-ERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHV 532

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
            ++++   A  A +E+G +VH  GV++    DV  G+++VDMY KCG  D A R F  +P
Sbjct: 533 LSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIP 592

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            RNV SW +MI+G  +HG G +A+ +F +M+  G  PD VT++ +LSACSHAGLVDE  +
Sbjct: 593 ARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRR 652

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
           +F  + +   + P+ E ++CMVDLLGRAGEL +  + I  MP+ P   +W+T+L A CR 
Sbjct: 653 YFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSA-CRV 711

Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
           + +   +GR+A ++L  ++  N VNYV L+N++A  G W +  K R AM+   +KK+ GC
Sbjct: 712 H-KDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRDAMRRRGLKKQGGC 770

Query: 804 SWVTMKDGVHVFVAG--DESHPEKDLIYEKLKELNQKMRDA-GY-VPQTKFALFDLEPES 859
           SWV +   VH F  G  +E+HP+   I   L+++  ++R+  GY     +FAL D++ ES
Sbjct: 771 SWVEIGKEVHFFYGGGDEEAHPQAGDIRRVLRDVETRVREQLGYCADDVQFALHDVDEES 830

Query: 860 KEDLVSYHSEKIAVAFVLTRNS--------KLPIRIMKNLRVCGDCHSAFKFISKIVGRE 911
           + + +  HSE++AV   L RN         + PIR+ KNLRVCGDCH  FK +S +V R 
Sbjct: 831 RAESLRAHSERLAVGLWLLRNGVDGGGGGHRQPIRVYKNLRVCGDCHEFFKGLSAVVRRA 890

Query: 912 IVLRDSNRFHHFNDGKCSCGDYW 934
           +V+RD+NRFH F  G CSC DYW
Sbjct: 891 LVVRDANRFHRFEHGTCSCKDYW 913



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 194/414 (46%), Gaps = 52/414 (12%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  + K GF  D  L N LI++Y + G+L  A ++F  M DRN VSW  ++ G+   G 
Sbjct: 239 LHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNVVSWTALMVGFLQHGD 298

Query: 67  SNEACKMFKEMVRAG-FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
           +    ++  EM  A     N Y L + L+AC  C       G+ +H L +++      +V
Sbjct: 299 ATGCLRLLGEMRAASEAAPNEYTLSASLKAC--CVTEDMGAGVGIHGLCVRTGYEEHYVV 356

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIET-RDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           ++ L+ +Y       D ARR+F+     R L +WN++IS Y+  G       +F  M+R 
Sbjct: 357 ASSLVLLYSKGGRIGD-ARRVFDCAGLGRGLATWNAMISGYAHAGHGRDALLVFREMRRR 415

Query: 185 GFRY--SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL--LSDLYVGSALVSG 240
             R+    +P+E+TF SL+ A     L       Q+ A +  +G    S+  +  ALV  
Sbjct: 416 RRRHEDQHQPDEFTFASLLKACGG--LGAPREGAQVHAAMAASGFSTASNAILAGALVDM 473

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG--------------RR------------- 273
           + + G    A ++FE++ +KN +    ++ G              RR             
Sbjct: 474 YVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVL 533

Query: 274 --------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                         +G++VH Y ++S     V+ GN +V+MY KCG  D++  +FR +  
Sbjct: 534 SSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPA 593

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           ++ VSW TMI+GL ++G   EA+  F  MR  G+     + ++ LS+C+  G +
Sbjct: 594 RNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLV 647



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 117/507 (23%), Positives = 212/507 (41%), Gaps = 57/507 (11%)

Query: 85  NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCAR 144
            R  +  +LRA  +   S  + G+Q+H  + K     D ++ N LI MY  C E  D A 
Sbjct: 216 RRKMIADLLRASAK--GSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGE-LDMAG 272

Query: 145 RIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA 204
            +F  +  R+++SW +++  + Q GD     +L   M+         PNEYT  + + A 
Sbjct: 273 EVFGGMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAAS---EAAPNEYTLSASLKAC 329

Query: 205 YSSVLSGS----------------YLLQQILAMVKK--------------AGLLSDLYVG 234
             +   G+                Y++   L ++                AGL   L   
Sbjct: 330 CVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATW 389

Query: 235 SALVSGFARLGNFYYARKIFEQMIQ----------------KNVVSMNGLMEGRRKGKEV 278
           +A++SG+A  G+   A  +F +M +                 +++   G +   R+G +V
Sbjct: 390 NAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQV 449

Query: 279 HGYLIRSGLFDM--VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           H  +  SG        +   LV+MY KCG +  +  VF  +  K+++ W T++ G  Q G
Sbjct: 450 HAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEG 509

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
              EA+  F    R G  +    L S +   A    +  G+Q+H  G+K    +DVS  N
Sbjct: 510 QVMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGN 569

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           +++ +Y   G      ++F  +P  + VSW ++I        L  EAV  + +MR  G  
Sbjct: 570 SIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLG-KHGLGREAVAMFEEMRAGGVE 628

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA-LLSCYGKCGEMDDCEK 515
           P+ VT++ +L+A S   +     +  + + +           A ++   G+ GE+ +   
Sbjct: 629 PDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARD 688

Query: 516 IFARMSERRDEVSWNSMISG-YIHNEL 541
           +   M        W +++S   +H ++
Sbjct: 689 LIRTMPMEPTVGVWQTLLSACRVHKDV 715



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 138/283 (48%), Gaps = 11/283 (3%)

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           ++L A++  S  + G Q+H  + K    ++T + N L+  Y KCGE+D   ++F  M + 
Sbjct: 222 DLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRD- 280

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL-DHFTFATVLSACASVATLERGME 582
           R+ VSW +++ G++ +      + L+  M    +   + +T +  L AC     +  G+ 
Sbjct: 281 RNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVG 340

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSMISGYARHG 641
           +H   VR   E   V+ S+LV +YSK GRI  A R FD   + R + +WN+MISGYA  G
Sbjct: 341 IHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAG 400

Query: 642 HGDKALTLFSQMKL------DGPLPDHVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYGL 694
           HG  AL +F +M+       D   PD  TF  +L AC   G   EG + H    +  +  
Sbjct: 401 HGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFST 460

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
                    +VD+  + G L    +   ++    N++ W TV+
Sbjct: 461 ASNAILAGALVDMYVKCGRLPVAMQVFERLE-RKNAIQWTTVV 502



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 1/110 (0%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
            A +L A A  ++L  G+++H    +     D ++G+ L+DMY+KCG +D A   F  M 
Sbjct: 220 IADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMR 279

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG-PLPDHVTFVGVLSAC 672
            RNV SW +++ G+ +HG     L L  +M+      P+  T    L AC
Sbjct: 280 DRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKAC 329


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/667 (35%), Positives = 384/667 (57%), Gaps = 14/667 (2%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK VHG+ ++  L   + + N L++MY+KCG I +++ +F+    K+ VSWNTM+ G   
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120

Query: 335 NGCYEEAIMNFCAMRR-----DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
            G   +    F  +R+     + + +   ++++ +  C    ++   +++H   LK    
Sbjct: 121 EG---DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 177

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
            +  V+NA ++ YA  G LS   +VF  +      SWN++IG  A S      ++  +L 
Sbjct: 178 YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND-PRLSLDAHLQ 236

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M+ +G  P+  T  ++L+A S     +LG +VH  +I+  +  +  +  ++LS Y  CGE
Sbjct: 237 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 296

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           +   + +F  M E +  VSWN++I+GY+ N    +A+ +   M+  G +L   +   V  
Sbjct: 297 LCTVQALFDAM-EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 355

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           AC+ + +L  G E HA  ++  LE D  I  +L+DMY+K G I  +S+ F+ +  ++  S
Sbjct: 356 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 415

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           WN+MI GY  HG   +A+ LF +M+  G  PD +TF+GVL+AC+H+GL+ EG ++   M 
Sbjct: 416 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 475

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI-NKMPITPNSLIWRTVLGACCRANCRKT 748
             +GL P L+ ++C++D+LGRAG+LDK    +  +M    +  IW+++L + CR + +  
Sbjct: 476 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS-CRIH-QNL 533

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
           E+G K A  LFE+EP+   NYVLL+N+YA  GKWEDV K R+ M E  ++K+AGCSW+ +
Sbjct: 534 EMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIEL 593

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
              V  FV G+      + I      L  K+   GY P T     DL  E K + +  HS
Sbjct: 594 NRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHS 653

Query: 869 EKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGK 927
           EK+A+ + L + S+   IR+ KNLR+C DCH+A K ISK++ REIV+RD+ RFHHF +G 
Sbjct: 654 EKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGV 713

Query: 928 CSCGDYW 934
           CSCGDYW
Sbjct: 714 CSCGDYW 720



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 143/545 (26%), Positives = 254/545 (46%), Gaps = 64/545 (11%)

Query: 49  RNSVSWACIVSGYTHKGMSNEACKMFKEMVR----AGFLLNRYALGSVLRACQECGPSGF 104
           RN VSW  ++  ++  G S E+  +  EM+       F+ +   L +VL  C      G 
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 105 KFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISV 164
             G  VH   +K     + +++N L+ MY  C   T+ A+ IF+    ++++SWN+++  
Sbjct: 61  --GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITN-AQMIFKMNNNKNVVSWNTMVGG 117

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
           +S  GDT   F +  +M   G    +K +E T  + +   +      S  L+++     K
Sbjct: 118 FSAEGDTHGTFDVLRQMLAGG--EDVKADEVTILNAVPVCFHESFLPS--LKELHCYSLK 173

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------ 272
              + +  V +A V+ +A+ G+  YA+++F  +  K V S N L+ G             
Sbjct: 174 QEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDA 233

Query: 273 -----------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
                                        R GKEVHG++IR+ L   + V   ++++Y  
Sbjct: 234 HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 293

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           CG +   +++F  M  K  VSWNT+I+G  QNG  + A+  F  M   G+     S++  
Sbjct: 294 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 353

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
             +C+ L  + LG++ H   LK  L+ D  ++ +L+ +YA  G +++  KVF  + E   
Sbjct: 354 FGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST 413

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
            SWN++I  +     L  EA+K + +M+R G +P+ +TF+ +L A +   +   G +   
Sbjct: 414 ASWNAMIMGYG-IHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLD 472

Query: 484 QV-----IKYNVANETTIENALLSCYGKCGEMDDCEKIFA-RMSERRDEVSWNSMISG-Y 536
           Q+     +K N+ +   + + L    G+ G++D   ++ A  MSE  D   W S++S   
Sbjct: 473 QMKSSFGLKPNLKHYACVIDML----GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR 528

Query: 537 IHNEL 541
           IH  L
Sbjct: 529 IHQNL 533



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 25/326 (7%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  I+++    D+F+  +++++Y+  G+L +   LFD M D++ VSW  +++GY  
Sbjct: 265 GKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQ 324

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G  + A  +F++MV  G  L   ++  V  AC    PS  + G + H   LK     D 
Sbjct: 325 NGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLL-PS-LRLGREAHAYALKHLLEDDA 382

Query: 124 LVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            ++  LI MY   GS  +S+    ++F  ++ +   SWN++I  Y   G      KLF  
Sbjct: 383 FIACSLIDMYAKNGSITQSS----KVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEE 438

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           MQR G      P++ TF  ++TA   S L   G   L Q   M    GL  +L   + ++
Sbjct: 439 MQRTGH----NPDDLTFLGVLTACNHSGLIHEGLRYLDQ---MKSSFGLKPNLKHYACVI 491

Query: 239 SGFARLGNFYYA-RKIFEQMIQKNVVSM-NGLMEGRRKGKEVH-GYLIRSGLFDMVAVGN 295
               R G    A R + E+M ++  V +   L+   R  + +  G  + + LF++     
Sbjct: 492 DMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKP 551

Query: 296 G----LVNMYAKCGTIDDSRSVFRFM 317
                L N+YA  G  +D R V + M
Sbjct: 552 ENYVLLSNLYAGLGKWEDVRKVRQRM 577



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 15/270 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   LK  F Y+  + N  +  Y + G L+ A ++F  +  +   SW  ++ G+   
Sbjct: 165 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 224

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
                +     +M  +G L + + + S+L AC +      + G +VH  ++++    D  
Sbjct: 225 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL--KSLRLGKEVHGFIIRNWLERDLF 282

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V   ++++Y  C E     + +F+ +E + L+SWN++I+ Y Q G       +F +M   
Sbjct: 283 VYLSVLSLYIHCGELC-TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLY 341

Query: 185 GFRY---SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           G +    S+ P    FG+       S+L    L ++  A   K  L  D ++  +L+  +
Sbjct: 342 GIQLCGISMMP---VFGA------CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 392

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           A+ G+   + K+F  + +K+  S N ++ G
Sbjct: 393 AKNGSITQSSKVFNGLKEKSTASWNAMIMG 422



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 76/157 (48%), Gaps = 6/157 (3%)

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR----LDHFTFATVLSACASVATLER 579
           R+ VSWNSMI  +  N    ++  L+  MM+         D  T  TVL  CA    +  
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G  VH   V+  L+ ++V+ +AL+DMYSKCG I  A   F +   +NV SWN+M+ G++ 
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120

Query: 640 HGHGDKALTLFSQMKLDGP--LPDHVTFVGVLSACSH 674
            G       +  QM   G     D VT +  +  C H
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 157


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 257/744 (34%), Positives = 398/744 (53%), Gaps = 50/744 (6%)

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------ 272
           L +G+A++S   R G  ++A ++F +M +++V S N ++ G                   
Sbjct: 131 LRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW 190

Query: 273 -----------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
                                  R G+EVH +++R G  D V V N LV MYAKCG I  
Sbjct: 191 AGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVA 250

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +R VF  M   D +SWN MI+G  +N   E  +  F  M  + +  +  ++ S   +   
Sbjct: 251 ARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           L  +   +++HG  +K G   DV+  N+L+ +Y   G +    K+F  M   D +SW ++
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           I  + +      +A++ Y  M     SP+ VT  + LAA +      +G ++H       
Sbjct: 371 ISGY-EKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKG 429

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV 549
                 + NALL  Y K   +D   ++F  M+E+ D VSW+SMI+G+  N    +A+   
Sbjct: 430 FIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEK-DVVSWSSMIAGFCFNHRSFEALYYF 488

Query: 550 WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
            +M+    + +  TF   LSACA+   L  G E+HA  +R  +  +  + +AL+D+Y KC
Sbjct: 489 RYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKC 547

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
           G+  YA   F +   ++V SWN M+SG+  HG GD AL+LF+QM   G  PD VTFV +L
Sbjct: 548 GQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALL 607

Query: 670 SACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPN 729
            ACS AG+V +G++ F  M++ + ++P L+ ++CMVDLL R G+L +    IN+MPI P+
Sbjct: 608 CACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPD 667

Query: 730 SLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKAR 789
           + +W  +L   CR + R  ELG  AA ++ E+EP +   +VLL ++Y   GKW  VA+ R
Sbjct: 668 AAVWGALLNG-CRIH-RHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVR 725

Query: 790 KAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTK 849
           K M+E  ++++ GCSWV +K   H F+  DESHP+   I   L  + ++M+  G+ P   
Sbjct: 726 KTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVE- 784

Query: 850 FALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIV 908
            +L D E  S++D++  HSE++AVAF L   +    I + KN   C  CH  FK IS+IV
Sbjct: 785 -SLEDKE-VSEDDILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIV 842

Query: 909 GREIVLRDSNRFHHFNDGKCSCGD 932
            REI +RD+ + H F DG CSCGD
Sbjct: 843 RREITVRDTKQLHCFKDGDCSCGD 866



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 160/600 (26%), Positives = 284/600 (47%), Gaps = 68/600 (11%)

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
           R A+ + +RAC         FG+++   +L             ++  +G        A R
Sbjct: 109 RRAVDAGMRACARADAEHPSFGLRLGNAMLS------------MLVRFGEIWH----AWR 152

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           +F ++  RD+ SWN ++  Y + G       L+ RM   G R    P+ YTF  ++    
Sbjct: 153 VFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR----PDVYTFPCVLRTCG 208

Query: 206 SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
              +    + +++ A V + G   ++ V +ALV+ +A+ G+   ARK+F+ M   + +S 
Sbjct: 209 G--IPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISW 266

Query: 266 NGLMEGRRK-----------------------------------------GKEVHGYLIR 284
           N ++ G  +                                          KE+HG+ ++
Sbjct: 267 NAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVK 326

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
            G    VA  N L+ MY   G + D+  +F  M  KD++SW  MISG ++NG  ++A+  
Sbjct: 327 RGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEV 386

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           +  M    +   + ++ S L++CA LG + +G ++H      G    V V+NALL +YA 
Sbjct: 387 YALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAK 446

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
           + ++ + ++VF  M E D VSW+S+I  F  +    S    YY         PN VTFI 
Sbjct: 447 SKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHR--SFEALYYFRYMLGHVKPNSVTFIA 504

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
            L+A ++    + G ++HA V++  + +E  + NALL  Y KCG+       F+  SE +
Sbjct: 505 ALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSE-K 563

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV- 583
           D VSWN M+SG++ + L   A++L   M++ G+  D  TF  +L AC+    + +G E+ 
Sbjct: 564 DVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELF 623

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGH 642
           H    +  +  ++   + +VD+ S+ G++  A    + MP++ +   W ++++G   H H
Sbjct: 624 HMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRH 683



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 153/561 (27%), Positives = 256/561 (45%), Gaps = 53/561 (9%)

Query: 17  AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKE 76
           ++ + L N ++++ VR G++  A ++F +MP+R+  SW  +V GY   G   EA  ++  
Sbjct: 128 SFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYR 187

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
           M+ AG   + Y    VLR C   G   ++ G +VH  VL+     +  V N L+ MY  C
Sbjct: 188 MLWAGMRPDVYTFPCVLRTCG--GIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKC 245

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
            +    AR++F+ +   D ISWN++I+ + +  +  +  +LF  M        ++PN  T
Sbjct: 246 GDIV-AARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTM----LENEVQPNLMT 300

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
             S+  A  S +LS     +++     K G   D+   ++L+  +  LG    A KIF +
Sbjct: 301 ITSVTVA--SGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSR 358

Query: 257 MIQKNVVSMNGLMEGRRK-----------------------------------------G 275
           M  K+ +S   ++ G  K                                         G
Sbjct: 359 METKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVG 418

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
            ++H      G    V V N L+ MYAK   ID +  VF+FM  KD VSW++MI+G   N
Sbjct: 419 IKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFN 478

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
               EA+  F  M    +  ++ + I+ LS+CA+ G +  G++IH   L+ G+ S+  V 
Sbjct: 479 HRSFEALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVP 537

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           NALL LY   G  S     F +  E D VSWN ++  F  +  L   A+  +  M   G 
Sbjct: 538 NALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFV-AHGLGDIALSLFNQMVEMGE 596

Query: 456 SPNGVTFINILAAASSFSMGKLGHQV-HAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
            P+ VTF+ +L A S   M   G ++ H    K+++         ++    + G++ +  
Sbjct: 597 HPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAY 656

Query: 515 KIFARMSERRDEVSWNSMISG 535
            +  RM  + D   W ++++G
Sbjct: 657 NLINRMPIKPDAAVWGALLNG 677



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 111/466 (23%), Positives = 204/466 (43%), Gaps = 53/466 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +L+ GF  +V + N L+ +Y + GD+ +A K+FD M   + +SW  +++G+      
Sbjct: 220 HAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHEC 279

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
               ++F  M+      N   + SV  A       G  F  ++H   +K     D    N
Sbjct: 280 EAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVG--FAKEMHGFAVKRGFAIDVAFCN 337

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI MY S     D A +IF  +ET+D +SW ++IS Y + G      ++++ M+     
Sbjct: 338 SLIQMYTSLGRMGD-AGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALME----L 392

Query: 188 YSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
           +++ P++ T   +L   A    L     L +   + +  G +  + V +AL+  +A+  +
Sbjct: 393 HNVSPDDVTIASALAACACLGRLDVGIKLHE---LAQNKGFIRYVVVANALLEMYAKSKH 449

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG----------------------------------- 271
              A ++F+ M +K+VVS + ++ G                                   
Sbjct: 450 IDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHVKPNSVTFIAALSAC 509

Query: 272 -----RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                 R GKE+H Y++R G+     V N L+++Y KCG    + + F     KD VSWN
Sbjct: 510 AATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWN 569

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI-HGEGLK 385
            M+SG   +G  + A+  F  M   G      + ++ L +C+  G ++ G ++ H    K
Sbjct: 570 IMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEK 629

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI 430
             +  ++     ++ L +  G L+    +   MP + D   W +++
Sbjct: 630 FSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALL 675



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 206/457 (45%), Gaps = 56/457 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H   +K GFA DV  CN+LI +Y  +G +  A K+F  M  ++++SW  ++SGY  
Sbjct: 317 AKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEK 376

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G  ++A +++  M       +   + S L AC   G      G+++H L          
Sbjct: 377 NGFPDKALEVYALMELHNVSPDDVTIASALAACACLG--RLDVGIKLHELAQNKGFIRYV 434

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +V+N L+ MY    +  D A  +F+ +  +D++SW+S+I+ +     +      F  M  
Sbjct: 435 VVANALLEMYAKS-KHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG 493

Query: 184 EGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
                 +KPN  TF + ++  AA  ++ SG    ++I A V + G+ S+ YV +AL+  +
Sbjct: 494 H-----VKPNSVTFIAALSACAATGALRSG----KEIHAYVLRCGIGSEGYVPNALLDLY 544

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY-LIRSGLFD-MVAVGN---- 295
            + G   YA   F    +K+VVS N ++ G       HG   I   LF+ MV +G     
Sbjct: 545 VKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFV----AHGLGDIALSLFNQMVEMGEHPDE 600

Query: 296 ----GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
                L+   ++ G +     +F  M  K S+     +  L    C  +       + R 
Sbjct: 601 VTFVALLCACSRAGMVIQGWELFHMMTEKFSI-----VPNLKHYACMVD------LLSRV 649

Query: 352 GLMSSNFSLISTL---SSCASLGWIMLGQQIH-----GE-GLKLGLD---SDVSVSNALL 399
           G ++  ++LI+ +      A  G ++ G +IH     GE   K+ L+   +DV+    L 
Sbjct: 650 GKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLC 709

Query: 400 SLYADAGYLSRCLKVFFLMPEH-----DQVSWNSVIG 431
            LY DAG  ++  +V   M E      +  SW  V G
Sbjct: 710 DLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKG 746



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 88/191 (46%), Gaps = 4/191 (2%)

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
           +W +    +  D   +  +   C     ++ GM   A        F + +G+A++ M  +
Sbjct: 84  LWLLESSPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVR 143

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
            G I +A R F  MP R+V+SWN M+ GY + G  ++AL L+ +M   G  PD  TF  V
Sbjct: 144 FGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCV 203

Query: 669 LSACSHAGLVDEGF-KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPIT 727
           L  C   G+ D    +   +    +G   +++  + +V +  + G++    +  + M +T
Sbjct: 204 LRTC--GGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVT 261

Query: 728 PNSLIWRTVLG 738
            + + W  ++ 
Sbjct: 262 -DCISWNAMIA 271



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 46/249 (18%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  +L+ G   + ++ N L+++YV+ G  + A   F    +++ VSW  ++SG+
Sbjct: 516 RSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGF 575

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G+ + A  +F +MV  G   +     ++L AC   G            +V++  + F
Sbjct: 576 VAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAG------------MVIQGWELF 623

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
             +     I                       +L  +  ++ + S+ G     + L +RM
Sbjct: 624 HMMTEKFSI---------------------VPNLKHYACMVDLLSRVGKLTEAYNLINRM 662

Query: 182 QREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAM----VKKAGLLSDLYVGS 235
                   +KP+   +G+L+     +  V  G    + IL +    V    LL DLY  +
Sbjct: 663 -------PIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDA 715

Query: 236 ALVSGFARL 244
              +  AR+
Sbjct: 716 GKWAQVARV 724


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 760

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/731 (33%), Positives = 378/731 (51%), Gaps = 73/731 (9%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           K  + H  +++SG  +   +   L+  Y+     +D+  + + +      S++++I  L 
Sbjct: 33  KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALT 92

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           +   + ++I  F  M   GL+     L +    CA L     G+QIH      GLD D  
Sbjct: 93  KAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAF 152

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQV----------------------------- 424
           V  +L  +Y   G +    KVF  M E D V                             
Sbjct: 153 VQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSG 212

Query: 425 ------SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
                 SWN ++  F  S     EAV  +  M   G+ P+ VT  ++L +        +G
Sbjct: 213 IEPNIVSWNGILSGFNRS-GYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMG 271

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEM---------------------------- 510
            Q+H  VIK  +  +  + +A+L  YGK G +                            
Sbjct: 272 RQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRN 331

Query: 511 ---DDCEKIFARMSERRDE---VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
              D   ++F    E++ E   VSW S+I+G   N    +A+ L   M   G + +  T 
Sbjct: 332 GLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTI 391

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
            ++L AC ++A L  G   H   VR  L  DV +GSAL+DMY+KCGRI  +   F++MP 
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPT 451

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           +N+  WNS+++GY+ HG   + +++F  +      PD ++F  +LSAC   GL DEG+K+
Sbjct: 452 KNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           F  MS+ YG+ P+LE +SCMV+LLGRAG+L +  + I ++P  P+S +W  +L +C   N
Sbjct: 512 FNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQN 571

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
               +L   AA  LF +EP+N   YVL++N+YA+ G W +V   R  M+   +KK  GCS
Sbjct: 572 --NVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLV 864
           W+ +K+ V+  +A D+SHP+ D I EK+ E++++MR +G+ P   FAL D+E + +E ++
Sbjct: 630 WIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQML 689

Query: 865 SYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
             HSEK+AV F +L      P++++KNLR+CGDCH+  KFIS   GREI +RD+NRFHHF
Sbjct: 690 WGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHF 749

Query: 924 NDGKCSCGDYW 934
            DG CSCGD+W
Sbjct: 750 KDGICSCGDFW 760



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/544 (21%), Positives = 249/544 (45%), Gaps = 33/544 (6%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H +ILK G   D ++   LI  Y        A  +   +PD    S++ ++   T   + 
Sbjct: 38  HARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLF 97

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           +++  +F  M   G + + + L ++ + C E   S FK G Q+HC+   S    D  V  
Sbjct: 98  SQSIGVFSRMFSHGLIPDTHVLPNLFKVCAEL--SAFKAGKQIHCVACVSGLDMDAFVQG 155

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L  MY  C    D AR++F+ +  +D+++ ++++  Y+++G    V ++ S M++ G  
Sbjct: 156 SLFHMYMRCGRMGD-ARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSG-- 212

Query: 188 YSLKPNEYTFGSLITAAYSSVLSG---SYLLQQILAMVKKA---GLLSDLYVGSALVSGF 241
             ++PN          +++ +LSG   S   ++ + M +K    G   D    S+++   
Sbjct: 213 --IEPN--------IVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSV 262

Query: 242 ARLGNFYYARKI----FEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVG--N 295
               N    R+I     +Q + K+   ++ +++   K   V+G +     F+M+  G  N
Sbjct: 263 GDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCN 322

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGK----DSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
             +   ++ G +D +  +F     +    + VSW ++I+G  QNG   EA+  F  M+  
Sbjct: 323 AYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVA 382

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G+  +  ++ S L +C ++  +  G+  HG  +++ L  DV V +AL+ +YA  G +   
Sbjct: 383 GVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMS 442

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
             VF +MP  + V WNS++  ++       E +  +  + R    P+ ++F ++L+A   
Sbjct: 443 QIVFNMMPTKNLVCWNSLMNGYS-MHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501

Query: 472 FSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
             +   G +    +  +Y +       + +++  G+ G++ +   +   +    D   W 
Sbjct: 502 VGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWG 561

Query: 531 SMIS 534
           ++++
Sbjct: 562 ALLN 565



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 139/563 (24%), Positives = 251/563 (44%), Gaps = 94/563 (16%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYG--SCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           Q H  +LKS    DG +S  LIA Y   +C    D    I + I    + S++S+I   +
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADL---ILQSIPDPTVYSFSSLIYALT 92

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL--ITAAYSSVLSGSYLLQQILAMVKK 224
           +         +FSRM    F + L P+ +   +L  + A  S+  +G    +QI  +   
Sbjct: 93  KAKLFSQSIGVFSRM----FSHGLIPDTHVLPNLFKVCAELSAFKAG----KQIHCVACV 144

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIR 284
           +GL  D +V  +L   + R G    ARK+F++M +K+VV+ + L+ G             
Sbjct: 145 SGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCG------------- 191

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEE 340
                           YA+ G +++   +   M    I  + VSWN ++SG +++G ++E
Sbjct: 192 ----------------YARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKE 235

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A++ F  M   G      ++ S L S      + +G+QIHG  +K GL  D  V +A+L 
Sbjct: 236 AVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLD 295

Query: 401 LYADAGY-------------------------------LSRCLKVFFLMPEH----DQVS 425
           +Y  +G+                               + + L++F L  E     + VS
Sbjct: 296 MYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVS 355

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           W S+I   A +   + EA++ + +M+ AG  PN VT  ++L A  + +    G   H   
Sbjct: 356 WTSIIAGCAQNGKDI-EALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFA 414

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
           ++ ++ ++  + +AL+  Y KCG +   + +F  M   ++ V WNS+++GY  +    + 
Sbjct: 415 VRVHLLDDVHVGSALIDMYAKCGRIKMSQIVF-NMMPTKNLVCWNSLMNGYSMHGKAKEV 473

Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLERG-----MEVHACGVRACLEFDVVIGS 600
           M++   +M+   + D  +F ++LSAC  V   + G     M     G++  LE      S
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHY----S 529

Query: 601 ALVDMYSKCGRIDYASRFFDLMP 623
            +V++  + G++  A      +P
Sbjct: 530 CMVNLLGRAGKLQEAYDLIKEIP 552



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 166/420 (39%), Gaps = 88/420 (20%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR------------ 49
           K  K  H      G   D F+  +L ++Y+R G +  A K+FD M ++            
Sbjct: 133 KAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGY 192

Query: 50  -----------------------NSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNR 86
                                  N VSW  I+SG+   G   EA  MF++M   GF  ++
Sbjct: 193 ARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQ 252

Query: 87  YALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC---------- 136
             + SVL +  +        G Q+H  V+K     D  V + ++ MYG            
Sbjct: 253 VTVSSVLPSVGD--SENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLF 310

Query: 137 -----LESTDCARRI------------------FEEIETR-DLISWNSIISVYSQRGDTI 172
                +E+  C   I                  F+E +   +++SW SII+  +Q G  I
Sbjct: 311 DEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDI 370

Query: 173 SVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLY 232
              +LF  MQ  G    +KPN  T  S++ A  +    G        A+  +  LL D++
Sbjct: 371 EALELFREMQVAG----VKPNRVTIPSMLPACGNIAALGHGRSTHGFAV--RVHLLDDVH 424

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGY---LIRSG 286
           VGSAL+  +A+ G    ++ +F  M  KN+V  N LM G     K KEV      L+R+ 
Sbjct: 425 VGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTR 484

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA 341
           L         L++   + G  D+    F  M     I      ++ M++ L + G  +EA
Sbjct: 485 LKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEA 544


>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 225/578 (38%), Positives = 344/578 (59%), Gaps = 9/578 (1%)

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           SL+  +SSC S+ +      IH   +K    SD  + + L+S+Y   GY     ++F  M
Sbjct: 67  SLVFAISSCTSVSYC---SAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 123

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR-RAGWSPNGVTFINILAAASSFSMGKL 477
           P  D VSWNS++   +     +   +  +  MR  +G  PN VT +++++A +       
Sbjct: 124 PNKDLVSWNSLMSGLS-GRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDE 182

Query: 478 GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI 537
           G  +H  V+K  ++ +  + N+L++ YGK G +D   ++F  M  R   VSWNSM+  + 
Sbjct: 183 GKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVR-SLVSWNSMVVIHN 241

Query: 538 HNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
           HN    K M+L   M + G   D  T   +L AC       +   +HA   R     D++
Sbjct: 242 HNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADII 301

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           I +AL+++Y+K GR++ +   F+ +  R+  +W +M++GYA H  G +A+ LF  M  +G
Sbjct: 302 IATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEG 361

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
              DHVTF  +LSACSH+GLV+EG K+F+ MS+VY + P+L+ +SCMVDLLGR+G L+  
Sbjct: 362 VEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDA 421

Query: 718 EEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYA 777
            E I  MP+ P+S +W  +LGAC        ELG++ A  L  ++P +  NY++L+N+Y+
Sbjct: 422 YELIKSMPMEPSSGVWGALLGACRVYG--NVELGKEVAEQLLSLDPSDHRNYIMLSNIYS 479

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
           + G W D +K R  MKE  + +  GCS++   + +H FV GD+ HP  D I+ KL+EL +
Sbjct: 480 AAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIR 539

Query: 838 KMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGD 896
           K+R+AG  P+T+F L D++ E K D+++ HSEK+A+AF +L   S +P+ I KNLR+CGD
Sbjct: 540 KIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGD 599

Query: 897 CHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CHS  KF S +  R I++RDS RFHHF DG CSC DYW
Sbjct: 600 CHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 637



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 207/405 (51%), Gaps = 10/405 (2%)

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +H  +I+S  +    +G+ LV+MY K G  +D++ +F  M  KD VSWN+++SGL   G 
Sbjct: 84  IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 143

Query: 338 YEEAIMNFCAMRRD-GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
               +  FC MR + G   +  +L+S +S+CA +G +  G+ +HG  +KLG+     V N
Sbjct: 144 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 203

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           +L+++Y   G+L    ++F  MP    VSWNS++    +      + +  +  M+RAG +
Sbjct: 204 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMV-VIHNHNGYAEKGMDLFNLMKRAGIN 262

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P+  T + +L A +   +G+    +HA + +     +  I  ALL+ Y K G ++  E I
Sbjct: 263 PDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDI 322

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F  + + RD ++W +M++GY  +    +A+ L   M++ G  +DH TF  +LSAC+    
Sbjct: 323 FEEIKD-RDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGL 381

Query: 577 LERG---MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNS 632
           +E G    E+ +   R     D    S +VD+  + GR++ A      MP+      W +
Sbjct: 382 VEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGA 439

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGL 677
           ++     +G+ +    +  Q+    P  DH  ++ + +  S AGL
Sbjct: 440 LLGACRVYGNVELGKEVAEQLLSLDP-SDHRNYIMLSNIYSAAGL 483



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 180/393 (45%), Gaps = 49/393 (12%)

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
           F+ S     Y+    +  A SS  S SY    I A V K+   SD ++G  LVS + +LG
Sbjct: 53  FQLSPPFQVYSIVQSLVFAISSCTSVSYC-SAIHARVIKSLNYSDGFIGDRLVSMYFKLG 111

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRR-------------------------------- 273
               A+++F++M  K++VS N LM G                                  
Sbjct: 112 YDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVV 171

Query: 274 ----------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                     +GK +HG +++ G+     V N L+NMY K G +D +  +F  M  +  V
Sbjct: 172 SACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLV 231

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SWN+M+   + NG  E+ +  F  M+R G+     ++++ L +C   G     + IH   
Sbjct: 232 SWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYI 291

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
            + G ++D+ ++ ALL+LYA  G L+    +F  + + D+++W +++  +A   A   EA
Sbjct: 292 HRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYA-VHACGREA 350

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSM---GKLGHQVHAQVIKYNVANETTIENAL 500
           +K +  M + G   + VTF ++L+A S   +   GK   ++ ++V  Y V       + +
Sbjct: 351 IKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEV--YRVEPRLDHYSCM 408

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           +   G+ G ++D  ++   M        W +++
Sbjct: 409 VDLLGRSGRLEDAYELIKSMPMEPSSGVWGALL 441



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 211/430 (49%), Gaps = 33/430 (7%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H +++K     D F+ + L+++Y ++G    A +LFDEMP+++ VSW  ++SG + +G 
Sbjct: 84  IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 143

Query: 67  ----SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                N  C+M  E   +G   N   L SV+ AC + G      G  +H +V+K   +  
Sbjct: 144 LGACLNAFCRMRTE---SGRQPNEVTLLSVVSACADMG--ALDEGKSLHGVVVKLGMSGK 198

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V N LI MYG  L   D A ++FEE+  R L+SWNS++ +++  G       LF+ M+
Sbjct: 199 AKVVNSLINMYGK-LGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMK 257

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           R G    + P++ T  +L+ A   + L      + I A + + G  +D+ + +AL++ +A
Sbjct: 258 RAG----INPDQATMVALLRACTDTGLGRQ--AESIHAYIHRCGFNADIIIATALLNLYA 311

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGR------RKGKEVHGYLIRSGL-FDMVAVGN 295
           +LG    +  IFE++  ++ ++   ++ G       R+  ++   +++ G+  D V   +
Sbjct: 312 KLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTH 371

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNFCAMRR 350
            L++  +  G +++ +  F  M     V      ++ M+  L ++G  E+A   +  ++ 
Sbjct: 372 -LLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDA---YELIKS 427

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
             +  S+    + L +C   G + LG+++  + L L   SD      L ++Y+ AG    
Sbjct: 428 MPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLD-PSDHRNYIMLSNIYSAAGLWRD 486

Query: 411 CLKVFFLMPE 420
             KV  LM E
Sbjct: 487 ASKVRALMKE 496



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 171/369 (46%), Gaps = 55/369 (14%)

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
           +H  V+KS    DG + + L++MY       D A+R+F+E+  +DL+SWNS++S  S RG
Sbjct: 84  IHARVIKSLNYSDGFIGDRLVSMYFKLGYDED-AQRLFDEMPNKDLVSWNSLMSGLSGRG 142

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLL 228
              +    F RM+ E  R   +PNE T  S+++A A    L     L  +   V K G+ 
Sbjct: 143 YLGACLNAFCRMRTESGR---QPNEVTLLSVVSACADMGALDEGKSLHGV---VVKLGMS 196

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM----------EGR------ 272
               V ++L++ + +LG    A ++FE+M  +++VS N ++          +G       
Sbjct: 197 GKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLM 256

Query: 273 -------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
                                    R+ + +H Y+ R G    + +   L+N+YAK G +
Sbjct: 257 KRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRL 316

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
           + S  +F  +  +D ++W  M++G   + C  EAI  F  M ++G+   + +    LS+C
Sbjct: 317 NASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSAC 376

Query: 368 ASLGWIMLGQ---QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQ 423
           +  G +  G+   +I  E  +  ++  +   + ++ L   +G L    ++   MP E   
Sbjct: 377 SHSGLVEEGKKYFEIMSEVYR--VEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSS 434

Query: 424 VSWNSVIGA 432
             W +++GA
Sbjct: 435 GVWGALLGA 443



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 132/259 (50%), Gaps = 16/259 (6%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H  ++K G +    + N+LIN+Y ++G L +AS+LF+EMP R+ VSW  +V  + 
Sbjct: 182 EGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHN 241

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQ---VHCLVLKSNQ 119
           H G + +   +F  M RAG   ++  + ++LRAC + G      G Q   +H  + +   
Sbjct: 242 HNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTG-----LGRQAESIHAYIHRCGF 296

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D +++  L+ +Y   L   + +  IFEEI+ RD I+W ++++ Y+         KLF 
Sbjct: 297 NADIIIATALLNLYAK-LGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFD 355

Query: 180 RMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
            M +EG    ++ +  TF  L++A ++S ++       +I++ V +     D Y  S +V
Sbjct: 356 LMVKEG----VEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SCMV 409

Query: 239 SGFARLGNFYYARKIFEQM 257
               R G    A ++ + M
Sbjct: 410 DLLGRSGRLEDAYELIKSM 428



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 54/99 (54%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           + A+  H  I + GF  D+ +   L+N+Y ++G L ++  +F+E+ DR+ ++W  +++GY
Sbjct: 282 RQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGY 341

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
                  EA K+F  MV+ G  ++      +L AC   G
Sbjct: 342 AVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSG 380


>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial [Vitis vinifera]
 gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/678 (35%), Positives = 388/678 (57%), Gaps = 8/678 (1%)

Query: 260 KNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
           K ++S+    +      +++  ++ + L   +  G  +   Y + G++  +   F  +  
Sbjct: 16  KTLLSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITF 75

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           ++  SWNT+++   +N C+ + +  F  M ++G +  +F+L+  + +C  L      +  
Sbjct: 76  ENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLF 135

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI-GAFADSEA 438
           H   +KL L+ D  V+ AL+++Y + G L    KVF  +P  + V W  +I G    SE 
Sbjct: 136 HSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEE 195

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN-VANETTIE 497
                 + +  MRR+G+  +      ++ A  +   GK G   H   IK N + +   ++
Sbjct: 196 F--GVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQ 253

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ 557
            +L+  Y KCG +D   K+F  +S  RD V W+++I+G+  N    +++++   M+    
Sbjct: 254 TSLVDMYMKCGFLDFALKLFEEIS-YRDVVVWSAIIAGFARNGRALESISMFRQMLADSV 312

Query: 558 RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
             +  TFA+++ AC+S+ +L++G  VH   +R  +E DV   ++ +DMY+KCG I  A R
Sbjct: 313 TPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYR 372

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGL 677
            F  +P +NV+SW++MI+G+  HG   +AL LF +M+    LP+ VTFV VLSACSH+G 
Sbjct: 373 VFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGR 432

Query: 678 VDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
           ++EG+ HFKSMS+ YG+ P  E ++CMVDLLGRAG++D+   FIN MP  P +  W  +L
Sbjct: 433 IEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALL 492

Query: 738 GACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEV 797
           GA CR + R+ EL  + A  L  +E   +  YV+L+N+YA  G WE V K R  M E  +
Sbjct: 493 GA-CRIH-RRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGI 550

Query: 798 KKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEP 857
            K  G + + +++ +++F + D    +   I      L ++MR+ GYVP  +F L D++ 
Sbjct: 551 HKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMRELGYVPDLRFVLHDVDD 610

Query: 858 ESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRD 916
           E K++++  HSEK+A+ F +L     +PIRI KN+RVCGDCH+A KFIS I  R+I++RD
Sbjct: 611 EVKQEVLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCHTASKFISLITRRKIIMRD 670

Query: 917 SNRFHHFNDGKCSCGDYW 934
             RFHH  DG CSCGDYW
Sbjct: 671 VKRFHHVQDGVCSCGDYW 688



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 209/463 (45%), Gaps = 45/463 (9%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           QIL +     +     +   Y+++G L  ASK F+ +   N  SW  I++ ++      +
Sbjct: 37  QILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYD 96

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
             ++FK M++ G L++ + L   ++AC   G S F+     H L +K     D  V+  L
Sbjct: 97  VLQLFKRMLKEGKLVDSFNLVFAVKAC--FGLSLFQGAKLFHSLAIKLRLEGDPYVAPAL 154

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR-- 187
           + +Y   L S + A ++FEE+  ++ + W  +I  +    +   VF+LFSRM+R GF   
Sbjct: 155 MNVYTE-LGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELD 213

Query: 188 --------------YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLS---- 229
                         Y+ K  +   G  I   +  + S  +L   ++ M  K G L     
Sbjct: 214 PFVVEGLIQACGNVYAGKEGKTFHGLCIKKNF--IDSNFFLQTSLVDMYMKCGFLDFALK 271

Query: 230 --------DLYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGL------MEG 271
                   D+ V SA+++GFAR G    +  +F QM    +  N V+   +      +  
Sbjct: 272 LFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGS 331

Query: 272 RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
            ++G+ VHGY+IR+G+   V      ++MYAKCG I  +  VF  +  K+  SW+TMI+G
Sbjct: 332 LKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMING 391

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDS 390
              +G   EA+  F  MR    + ++ + +S LS+C+  G I  G           G+  
Sbjct: 392 FGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITP 451

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                  ++ L   AG +   L     MP E    +W +++GA
Sbjct: 452 VEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGA 494



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 171/353 (48%), Gaps = 39/353 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           + AKLFH   +K     D ++   L+NVY  +G L  A K+F+E+P +NSV W  ++ G+
Sbjct: 130 QGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGH 189

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT- 120
            +        ++F  M R+GF L+ + +  +++AC        K G   H L +K N   
Sbjct: 190 LNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAG--KEGKTFHGLCIKKNFID 247

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            +  +   L+ MY  C    D A ++FEEI  RD++ W++II+ +++ G  +    +F +
Sbjct: 248 SNFFLQTSLVDMYMKC-GFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQ 306

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           M  +    S+ PN  TF S++ A  S  S+  G    + +   + + G+  D+   ++ +
Sbjct: 307 MLAD----SVTPNSVTFASIVLACSSLGSLKQG----RSVHGYMIRNGVELDVKNYTSFI 358

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLV 298
             +A+ G    A ++F Q+ +KNV S + ++ G                F M  +    +
Sbjct: 359 DMYAKCGCIVTAYRVFCQIPEKNVFSWSTMING----------------FGMHGLCAEAL 402

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           N++       + RSV +     +SV++ +++S    +G  EE   +F +M RD
Sbjct: 403 NLFY------EMRSVNQL---PNSVTFVSVLSACSHSGRIEEGWSHFKSMSRD 446


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/659 (36%), Positives = 367/659 (55%), Gaps = 6/659 (0%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           ++H  +I +G+F        L+  YA+ G I+ +R VF         +WN MI    + G
Sbjct: 25  KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
              EA+  +  M  +G+   + +    L +C     +  G++   + +  G   DV V  
Sbjct: 85  AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGA 144

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           A+L+LYA  G +   ++VF  M   D V W ++I   A +     EAV  Y  M +    
Sbjct: 145 AVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQN-GQAREAVDIYRQMHKKRVE 203

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
            +GV  + ++ A ++    K+G  +H  +I+ ++  +  ++ +L+  Y K G ++    +
Sbjct: 204 GDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCV 263

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F RM   ++ +SW+++ISG+  N     A+ LV  M   G + D  +  +VL AC+ V  
Sbjct: 264 FRRML-YKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGF 322

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           L+ G  VH   VR  L FD V  +A++DMYSKCG + +A   FD +  R+  SWN++I+ 
Sbjct: 323 LKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIAS 381

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           Y  HG G++AL+LF QM+     PDH TF  +LSA SH+GLV++G   F  M   Y + P
Sbjct: 382 YGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQP 441

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAAN 756
             + ++CMVDLL RAG +++ +E I  M   P   IW  +L  C   N  K  +G  AA 
Sbjct: 442 SEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCL--NHGKFLIGEMAAK 499

Query: 757 MLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV 816
            + E+ P +   Y L++N +A+  +W++VA+ RK MK+  +KK  G S + +   +H F+
Sbjct: 500 KVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFL 559

Query: 817 AGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF- 875
             D+SH + + I + L +L+ +M+  GYVP+T+F L +LE E KE ++  HSE++A+AF 
Sbjct: 560 MEDKSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFG 619

Query: 876 VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +L       + I KNLRVCGDCH A KFISKIV REIV+RD  RFHHF DG CSCGDYW
Sbjct: 620 LLNTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678



 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 232/493 (47%), Gaps = 55/493 (11%)

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM----- 269
           + +I A++   G+       + L+  +ARLG+   AR++F++  Q  V + N ++     
Sbjct: 23  IAKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSR 82

Query: 270 ----------------EG--------------------RRKGKEVHGYLIRSGLFDMVAV 293
                           EG                     R G+E     +  G  D V V
Sbjct: 83  RGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFV 142

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
           G  ++N+YAKCG +D++  VF  M  +D V W TMI+GL QNG   EA+  +  M +  +
Sbjct: 143 GAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRV 202

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
                 ++  + +C +LG   +G  IHG  ++  +  DV V  +L+ +YA  G+L     
Sbjct: 203 EGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASC 262

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           VF  M   + +SW+++I  FA +      A++  +DM+  G+ P+ V+ +++L A S   
Sbjct: 263 VFRRMLYKNVISWSALISGFAQN-GFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVG 321

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
             KLG  VH  +++  +  +     A++  Y KCG +     +F ++S  RD +SWN++I
Sbjct: 322 FLKLGKSVHGYIVR-RLHFDCVSSTAVIDMYSKCGSLSFARTVFDQIS-FRDSISWNAII 379

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
           + Y  +    +A++L   M +   + DH TFA++LSA +    +E+G    +  V    E
Sbjct: 380 ASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVN---E 436

Query: 594 FDVVIG----SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGH---GDK 645
           + +       + +VD+ S+ GR++ A    + M     +  W +++SG   HG    G+ 
Sbjct: 437 YKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEM 496

Query: 646 ALTLFSQMKLDGP 658
           A     ++  D P
Sbjct: 497 AAKKVLELNPDDP 509



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 222/479 (46%), Gaps = 48/479 (10%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR 168
           ++H L++ +     G  +  LI  Y   L   + AR++F++     + +WN++I  YS+R
Sbjct: 25  KIHALMILTGIFGHGNSNAKLIQSYAR-LGHIESARQVFDKSPQCGVDAWNAMIIAYSRR 83

Query: 169 GDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQ--------- 217
           G       L+ RM  EG R    P+  T+  ++ A   S  + SG    +Q         
Sbjct: 84  GAMFEALSLYHRMASEGVR----PDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDD 139

Query: 218 ------ILAMVKKAGLLS------------DLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
                 +L +  K G +             DL   + +++G A+ G    A  I+ QM +
Sbjct: 140 VFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHK 199

Query: 260 KNV----VSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
           K V    V M GL++        + G  +HGY+IR  +   V V   LV+MYAK G ++ 
Sbjct: 200 KRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLEL 259

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +  VFR M+ K+ +SW+ +ISG  QNG    A+     M+  G    + SL+S L +C+ 
Sbjct: 260 ASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQ 319

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           +G++ LG+ +HG  ++  L  D   S A++ +Y+  G LS    VF  +   D +SWN++
Sbjct: 320 VGFLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAI 378

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKY 488
           I ++        EA+  +L MR     P+  TF ++L+A S   + + G +     V +Y
Sbjct: 379 IASYG-IHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEY 437

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI-HNELLPKAM 546
            +         ++    + G +++ +++   M        W +++SG + H + L   M
Sbjct: 438 KIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEM 496



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 176/393 (44%), Gaps = 51/393 (12%)

Query: 26  LINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLN 85
           LI  Y R+G + SA ++FD+ P     +W  ++  Y+ +G   EA  ++  M   G   +
Sbjct: 45  LIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPD 104

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
                 VL+AC        + G +     +      D  V   ++ +Y  C    D A R
Sbjct: 105 SSTYTVVLKACTR--SLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKC-GKMDEAMR 161

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           +F+++  RDL+ W ++I+  +Q G       ++ +M ++     ++ +      LI A  
Sbjct: 162 VFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKK----RVEGDGVVMLGLIQAC- 216

Query: 206 SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
            + L  S +   I   + +  ++ D+ V ++LV  +A+ G+   A  +F +M+ KNV+S 
Sbjct: 217 -TTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISW 275

Query: 266 NGLMEG-----------------------------------------RRKGKEVHGYLIR 284
           + L+ G                                          + GK VHGY++R
Sbjct: 276 SALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVR 335

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
              FD V+    +++MY+KCG++  +R+VF  +  +DS+SWN +I+    +G  EEA+  
Sbjct: 336 RLHFDCVS-STAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSL 394

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
           F  MR   +   + +  S LS+ +  G +  G+
Sbjct: 395 FLQMRETNVKPDHATFASLLSAFSHSGLVEKGR 427



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 129/261 (49%), Gaps = 13/261 (4%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +++     DV +  +L+++Y + G L  AS +F  M  +N +SW+ ++SG+   G 
Sbjct: 228 IHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGF 287

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           +  A ++  +M   G+  +  +L SVL AC + G    K G  VH  +++    FD + S
Sbjct: 288 AGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGF--LKLGKSVHGYIVRRLH-FDCVSS 344

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
             +I MY  C  S   AR +F++I  RD ISWN+II+ Y   G       LF +M+    
Sbjct: 345 TAVIDMYSKC-GSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRET-- 401

Query: 187 RYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
             ++KP+  TF SL++A   S  V  G Y       MV +  +       + +V   +R 
Sbjct: 402 --NVKPDHATFASLLSAFSHSGLVEKGRYWFS---IMVNEYKIQPSEKHYACMVDLLSRA 456

Query: 245 GNFYYARKIFEQMIQKNVVSM 265
           G    A+++ E MI +  +++
Sbjct: 457 GRVEEAQELIESMITEPGIAI 477



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/410 (21%), Positives = 195/410 (47%), Gaps = 31/410 (7%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           Q +  G+  DVF+   ++N+Y + G +  A ++FD+M  R+ V W  +++G    G + E
Sbjct: 130 QAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQARE 189

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
           A  ++++M +     +   +  +++AC   G S  K G+ +H  +++ +   D +V   L
Sbjct: 190 AVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHS--KMGLSIHGYMIRKDIIMDVIVQTSL 247

Query: 130 IAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
           + MY     LE   C   +F  +  +++ISW+++IS ++Q G   +  +L   MQ  G+ 
Sbjct: 248 VDMYAKNGHLELASC---VFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGY- 303

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
              KP+  +  S++ A   S +    L + +   + +  L  D    +A++  +++ G+ 
Sbjct: 304 ---KPDSVSLVSVLLAC--SQVGFLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSL 357

Query: 248 YYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIR---SGLFDMVAVGNGLVNMY 301
            +AR +F+Q+  ++ +S N ++        G+E     ++   + +    A    L++ +
Sbjct: 358 SFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAF 417

Query: 302 AKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           +  G ++  R  F  M+ +  +      +  M+  L + G  EEA     +M    +   
Sbjct: 418 SHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESM----ITEP 473

Query: 357 NFSL-ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             ++ ++ LS C + G  ++G+    + L+L  D D  + + + + +A A
Sbjct: 474 GIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPD-DPGIYSLVSNFFATA 522


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 254/720 (35%), Positives = 381/720 (52%), Gaps = 31/720 (4%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRRKGKEVHGYLIR 284
           + L+S +   G+   A  +F +++Q+          +V+S     E    G+ +H   + 
Sbjct: 97  TVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVE 156

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK-DSVSWNTMISGLDQNGCYEEAIM 343
           +GL     V + LV+MY +CG++ D+ ++F  +    D V WN MI+   QNG   EA+ 
Sbjct: 157 AGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREALE 216

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ--QIHGEGLKLGLDSDVSVSNALLSL 401
            F  M + G+     + +S   +C+S   +   Q    H    + GL SDV V+ AL++ 
Sbjct: 217 IFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNA 276

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           YA  G +    K F  MPE + VSW S+I AF     L+  AV+ +  M   G  P   T
Sbjct: 277 YARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIGHLL--AVETFHAMLLEGVVPTRST 334

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
               L       + +L   V A   +  V  +  I   L+  Y +C   +D  ++F+   
Sbjct: 335 LFAALEGCEDLRVARL---VEAIAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSA-- 389

Query: 522 ERRDEVSWNS-----MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
             R+E  W++     MI+ Y           L    ++RG   D   + T L ACAS+A 
Sbjct: 390 --REEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAA 447

Query: 577 LERGMEVHAC-GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
           L  G ++HAC      L+ DV +G+A+V MY +CG +  A   FD MP R+  SWN+M+S
Sbjct: 448 LSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLS 507

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
             A+HG  +    LF  M  +G   + + F+ +LSAC+HAGLV  G +HF +M+  +G++
Sbjct: 508 ASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVV 567

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           P  E + CMVDLLGR G L      +  MP+ P++  W  ++GAC       TE GR AA
Sbjct: 568 PATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYG--DTERGRFAA 625

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
             + E+   +   YV L N+Y++ G+W+D A  RK M +  ++K  G S + ++  VH F
Sbjct: 626 ERVLELRADHTAAYVALCNIYSAAGRWDDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEF 685

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
           V  D SHP+ + IY +L+ +   +  AGY   T   L D+E E KE L+ +HSEK+A+AF
Sbjct: 686 VVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAF 745

Query: 876 -VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            +++      +R++KNLRVC DCH+A KFISK+ GREIV+RD  RFHHF DG CSCGDYW
Sbjct: 746 GMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 143/560 (25%), Positives = 243/560 (43%), Gaps = 56/560 (10%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D +L ++L+ +Y+R G L SA  +F ++  ++ V W  ++S Y  +G S  A  +F  ++
Sbjct: 61  DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           + G  L+     SVL AC          G  +H   +++      +V++ L++MYG C  
Sbjct: 121 QEGIALDAIVFVSVLSACSS--EEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGS 178

Query: 139 STDCARRIFEEIETR-DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
             D A  +F  +E   D++ WN++I+  SQ G      ++F RM + G    + P+  TF
Sbjct: 179 LRD-ANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLG----IPPDLVTF 233

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            S+  A  SS    +  ++   A + + GL SD+ V +ALV+ +AR G    ARK F +M
Sbjct: 234 VSVFKACSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEM 293

Query: 258 IQKNVVSMNGLM-------------------------------------EGRRKGKEVHG 280
            ++N VS   ++                                     E  R  + V  
Sbjct: 294 PERNAVSWTSMIAAFTQIGHLLAVETFHAMLLEGVVPTRSTLFAALEGCEDLRVARLVEA 353

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN-----TMISGLDQN 335
                G+   VA+   LV  YA+C   +D+  VF     ++   W+      MI+   Q 
Sbjct: 354 IAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFS---AREEGEWDAALVTAMIAVYAQC 410

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG-EGLKLGLDSDVSV 394
                    + A    G+       I+ L +CASL  +  G+QIH        LD DV++
Sbjct: 411 RDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTL 470

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            NA++S+Y   G L      F  MP  D++SWN+++ A A     V +    +  M + G
Sbjct: 471 GNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASA-QHGRVEDCCDLFRAMLQEG 529

Query: 455 WSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           +    + F+N+L+A +   + K G     A    + V   T     ++   G+ G + D 
Sbjct: 530 FDAERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADA 589

Query: 514 EKIFARMSERRDEVSWNSMI 533
             I   M    D  +W +++
Sbjct: 590 HGIVQAMPVPPDAATWMALM 609



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 127/275 (46%), Gaps = 22/275 (8%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +   K FH  + + G   DV +   L+N Y R G++  A K F EMP+RN+VSW  +++ 
Sbjct: 248 ASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAA 307

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           +T  G    A + F  M+  G +  R  L + L  C++      +    V  +  +    
Sbjct: 308 FTQIG-HLLAVETFHAMLLEGVVPTRSTLFAALEGCED-----LRVARLVEAIAQEIGVV 361

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWN-----SIISVYSQRGDTISVF 175
            D  +   L+  Y  C    D A R+F     R+   W+     ++I+VY+Q  D  S F
Sbjct: 362 TDVAIVTDLVMAYARCDGQED-AIRVF---SAREEGEWDAALVTAMIAVYAQCRDRRSTF 417

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITAAYS-SVLSGSYLLQQILAMVKKAGLLSDLYVG 234
           KL+      G    + P+   + + + A  S + LS    +   +A  ++  L  D+ +G
Sbjct: 418 KLWGAAIERG----ISPDRILYITALDACASLAALSEGRQIHACVAADRR--LDRDVTLG 471

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
           +A+VS + + G+   AR  F+ M  ++ +S N ++
Sbjct: 472 NAIVSMYGQCGSLRDARDAFDGMPARDEISWNAML 506



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 127/324 (39%), Gaps = 19/324 (5%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD--EMPDRNSVSWACIVSGY 61
           A+L      + G   DV +   L+  Y R      A ++F   E  + ++     +++ Y
Sbjct: 348 ARLVEAIAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVY 407

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVH-CLVLKSNQT 120
                     K++   +  G   +R    + L AC     +    G Q+H C+       
Sbjct: 408 AQCRDRRSTFKLWGAAIERGISPDRILYITALDACASL--AALSEGRQIHACVAADRRLD 465

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D  + N +++MYG C    D AR  F+ +  RD ISWN+++S  +Q G       LF  
Sbjct: 466 RDVTLGNAIVSMYGQCGSLRD-ARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRA 524

Query: 181 MQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           M +EGF          F +L++A A++ ++      +   AM    G++        +V 
Sbjct: 525 MLQEGF----DAERIAFLNLLSACAHAGLVKAG--CEHFSAMTGDHGVVPATEHYGCMVD 578

Query: 240 GFARLGNFYYARKIFEQM-IQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLF----DMVAV 293
              R G    A  I + M +  +  +   LM   R  G    G      +     D  A 
Sbjct: 579 LLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAA 638

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFM 317
              L N+Y+  G  DD+ +V + M
Sbjct: 639 YVALCNIYSAAGRWDDAAAVRKIM 662


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 248/750 (33%), Positives = 403/750 (53%), Gaps = 44/750 (5%)

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV----------SMNGLMEGRRKG 275
           G ++ L++ + L+ G+A  G    A  ++ QM+   +V          S    +    +G
Sbjct: 90  GNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEG 149

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
            +VHG +++ GL   + V N L++ YA+CG +D  R +F  M+ ++ VSW ++I+G    
Sbjct: 150 VQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGR 209

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
              +EA+  F  M   G+  +  +++  +S+CA L  + LG+++     +LG++    + 
Sbjct: 210 DLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMV 269

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           NAL+ +Y   G +    ++F      + V +N+++  +   E   S+ +    +M + G 
Sbjct: 270 NALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHE-WASDVLVILDEMLQKGP 328

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            P+ VT ++ +AA +      +G   HA V++  +     I NA++  Y KCG+ +   K
Sbjct: 329 RPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACK 388

Query: 516 IFARMSER------------------------------RDEVSWNSMISGYIHNELLPKA 545
           +F  M  +                              RD VSWN+MI   +   +  +A
Sbjct: 389 VFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEA 448

Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
           + L   M  +G   D  T   + SAC  +  L+    V     +  +  D+ +G+ALVDM
Sbjct: 449 IELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDM 508

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
           +S+CG    A   F  M  R+V +W + I   A  G+ + A+ LF++M      PD V F
Sbjct: 509 FSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVF 568

Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
           V +L+ACSH G VD+G + F SM + +G+ P +  + CMVDLLGRAG L++  + I  MP
Sbjct: 569 VALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMP 628

Query: 726 ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDV 785
           I PN ++W ++L AC +   +  EL   AA  L ++ P+    +VLL+N+YAS GKW DV
Sbjct: 629 IEPNDVVWGSLLAACRKH--KNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDV 686

Query: 786 AKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
           A+ R  MKE  V+K  G S + ++  +H F +GDESH E   I   L+E+N ++ +AGYV
Sbjct: 687 ARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSEAGYV 746

Query: 846 PQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFI 904
           P T   L D++ + KE L+S HSEK+A+A+ ++T    +PIR++KNLR+C DCHS  K +
Sbjct: 747 PDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRMCSDCHSFAKLV 806

Query: 905 SKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           SK+  REI +RD+NR+H F +G CSC DYW
Sbjct: 807 SKLYNREITVRDNNRYHFFKEGFCSCRDYW 836



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 240/529 (45%), Gaps = 40/529 (7%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +LK G   D+F+ N+LI+ Y   G +    KLFD M +RN VSW  +++GY+ + +S
Sbjct: 153 HGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLS 212

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA  +F +M  AG   N   +  V+ AC +      + G +V   + +       ++ N
Sbjct: 213 KEAVSLFFQMGEAGVEPNPVTMVCVISACAKL--KDLELGKKVCSYISELGMELSTIMVN 270

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY  C +    AR+IF+E   ++L+ +N+I+S Y        V  +   M ++G R
Sbjct: 271 ALVDMYMKCGDIC-AARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPR 329

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
               P++ T  S I A   + L    + +   A V + GL     + +A++  + + G  
Sbjct: 330 ----PDKVTMLSTIAAC--AQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKR 383

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
             A K+FE M  K VV+ N L+ G          L+R G  ++                 
Sbjct: 384 EAACKVFEHMPNKTVVTWNSLIAG----------LVRDGDMEL----------------- 416

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
             +  +F  M+ +D VSWNTMI  L Q   +EEAI  F  M+  G+     +++   S+C
Sbjct: 417 --AWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASAC 474

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
             LG + L + +     K  +  D+ +  AL+ +++  G  S  + VF  M + D  +W 
Sbjct: 475 GYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWT 534

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           + IG  A  E     A++ + +M      P+ V F+ +L A S       G Q+   + K
Sbjct: 535 AAIGVMA-MEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEK 593

Query: 488 -YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
            + +         ++   G+ G +++   +   M    ++V W S+++ 
Sbjct: 594 AHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAA 642



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 159/646 (24%), Positives = 281/646 (43%), Gaps = 98/646 (15%)

Query: 109 QVHCLVLKSNQTFDGLVSNV--LIA--MYGSCLESTDCARRIF--EEIETRDLISWNSII 162
           Q+HC ++K         SN+  LIA  +    LES D AR  F  ++     L  +N +I
Sbjct: 43  QLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDYARNAFGDDDGNMASLFMYNCLI 102

Query: 163 SVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMV 222
             Y+  G       L+ +M   G    + P++YTF  L++A  S +L+ S  +Q +   V
Sbjct: 103 RGYASAGLGDQAILLYVQMLVMG----IVPDKYTFPFLLSAC-SKILALSEGVQ-VHGAV 156

Query: 223 KKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------- 272
            K GL  D++V ++L+  +A  G     RK+F+ M+++NVVS   L+ G           
Sbjct: 157 LKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAV 216

Query: 273 -------------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
                                            GK+V  Y+   G+     + N LV+MY
Sbjct: 217 SLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMY 276

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
            KCG I  +R +F     K+ V +NT++S    +    + ++    M + G      +++
Sbjct: 277 MKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTML 336

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-- 419
           ST+++CA LG + +G+  H   L+ GL+   ++SNA++ +Y   G      KVF  MP  
Sbjct: 337 STIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNK 396

Query: 420 -----------------------------EHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
                                        E D VSWN++IGA     ++  EA++ + +M
Sbjct: 397 TVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQV-SMFEEAIELFREM 455

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
           +  G   + VT + I +A        L   V   + K ++  +  +  AL+  + +CG+ 
Sbjct: 456 QNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDP 515

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
                +F RM E+RD  +W + I           A+ L   M+++  + D   F  +L+A
Sbjct: 516 SSAMHVFKRM-EKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTA 574

Query: 571 CASVATLERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           C+   ++++G ++      A G+R      +V    +VD+  + G ++ A      MP+ 
Sbjct: 575 CSHGGSVDQGRQLFWSMEKAHGIRP----HIVHYGCMVDLLGRAGLLEEAVDLIQSMPIE 630

Query: 626 -NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
            N   W S+++   +H + +  L  ++  KL    P+ V    +LS
Sbjct: 631 PNDVVWGSLLAACRKHKNVE--LAHYAAEKLTQLAPERVGIHVLLS 674



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 127/305 (41%), Gaps = 44/305 (14%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG-- 65
           H  +L++G      + N +I++Y++ G   +A K+F+ MP++  V+W  +++G    G  
Sbjct: 355 HAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDM 414

Query: 66  -----------------------------MSNEACKMFKEMVRAGFLLNRYALGSVLRAC 96
                                        M  EA ++F+EM   G   +R  +  +  AC
Sbjct: 415 ELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASAC 474

Query: 97  QECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLI 156
              G         V   + K++   D  +   L+ M+  C + +  A  +F+ +E RD+ 
Sbjct: 475 GYLG--ALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSS-AMHVFKRMEKRDVS 531

Query: 157 SWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY--SSVLSGSYL 214
           +W + I V +  G+T    +LF+ M        +KP++  F +L+TA     SV  G   
Sbjct: 532 AWTAAIGVMAMEGNTEGAIELFNEM----LEQKVKPDDVVFVALLTACSHGGSVDQGR-- 585

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRR 273
            Q   +M K  G+   +     +V    R G    A  + + M I+ N V    L+   R
Sbjct: 586 -QLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACR 644

Query: 274 KGKEV 278
           K K V
Sbjct: 645 KHKNV 649



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 56/296 (18%), Positives = 110/296 (37%), Gaps = 57/296 (19%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK     I K+    D+ L   L++++ R GD +SA  +F  M  R+  +W   +     
Sbjct: 483 AKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAM 542

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           +G +  A ++F EM+      +     ++L AC   G                       
Sbjct: 543 EGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGG----------------------- 579

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIET-----RDLISWNSIISVYSQRGDTISVFKLF 178
                          S D  R++F  +E        ++ +  ++ +  + G       L 
Sbjct: 580 ---------------SVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLI 624

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMV-KKAG---LLSDLY 232
             M        ++PN+  +GSL+ A   + +V    Y  +++  +  ++ G   LLS++Y
Sbjct: 625 QSM-------PIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIY 677

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLF 288
             +   +  AR+       K  +++   + + + GL+     G E H      GL 
Sbjct: 678 ASAGKWTDVARV-RLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLM 732


>gi|356495756|ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71420-like [Glycine max]
          Length = 782

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 247/686 (36%), Positives = 383/686 (55%), Gaps = 34/686 (4%)

Query: 273 RKGKEVHGYLIRSG--LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
           + G  +H Y++     + + V + N ++NMY KCG +  +R VF  M  ++ VSW  +IS
Sbjct: 107 QHGMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCGHLAYARYVFDQMSHRNIVSWTALIS 166

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           G  Q+G   E    F  +       + F+  S LS+C     I  G Q+H   LK+ LD+
Sbjct: 167 GHAQSGLVRECFSLFSGLLAH-FRPNEFAFASLLSACEEHD-IKCGMQVHAVALKISLDA 224

Query: 391 DVSVSNALLSLYAD-----AGYLSR---CLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
           +V V+N+L+++Y+       GY         +F  M   + VSWNS+I  F     L  +
Sbjct: 225 NVYVANSLITMYSKRSGFGGGYAQTPDDAWTMFKSMEFRNLVSWNSMIAXF-QLRGLGDK 283

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSF-------SMGKLGHQVHAQVIKYNVANETT 495
           A+  +  M   G   +  T +++ ++ +         +  +   Q+H   IK  + +E  
Sbjct: 284 AICLFAHMYCNGIGFDRATLLSVFSSLNECGAFDVINTYLRKCFQLHCLTIKSGLISEIE 343

Query: 496 IENALLSCYGKCG-EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
           +  AL+  Y   G  + DC +IF   S + D VSW ++IS +   +  P+   L++  + 
Sbjct: 344 VVTALIKSYANLGGHISDCYRIFHDTSSQLDIVSWTALISVFAERD--PEQAFLLFCQLH 401

Query: 555 RGQRL-DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID 613
           R   L D +TF+  L ACA   T +  M +H+  ++   + D V+ +AL+  Y++CG + 
Sbjct: 402 RQSYLPDWYTFSIALKACAYFVTEQHAMAIHSQVIKKGFQEDTVLCNALMHAYARCGSLA 461

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
            + + F+ M   ++ SWNSM+  YA HG    AL LF QM +    PD  TFV +LSACS
Sbjct: 462 LSEQVFNEMGCHDLVSWNSMLKSYAIHGQAKDALELFQQMNV---CPDSATFVALLSACS 518

Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
           H GLVDEG K F SMS  +G++PQL+ +SCMVDL GRAG++ + EE I KMP+ P+S+IW
Sbjct: 519 HVGLVDEGVKLFNSMSDDHGVVPQLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIW 578

Query: 734 RTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMK 793
            ++LG+C +    +T L + AA+   E+EP N++ YV ++N+Y+SGG +      R  M 
Sbjct: 579 SSLLGSCRKHG--ETRLAKLAADKFKELEPNNSLGYVQMSNIYSSGGSFTKAGLIRNEMS 636

Query: 794 EAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALF 853
           + +V+KE G SWV +   VH F +G + HP +  I  +L+ +  ++++ GYVP+   AL+
Sbjct: 637 DFKVRKEPGLSWVEIGKQVHEFGSGGQYHPNRGAILSRLEIVIGQLKEMGYVPELSLALY 696

Query: 854 DLEPESKEDLVSYHSEKIAVAFVLTRNSKLP-----IRIMKNLRVCGDCHSAFKFISKIV 908
           D E E KED + +HSEK+A+ F +     LP     I+IMKN+R+C DCH+  K  S + 
Sbjct: 697 DTEVEHKEDQLFHHSEKMALVFAIMNEGSLPCGGNVIKIMKNIRICVDCHNFMKLASYLF 756

Query: 909 GREIVLRDSNRFHHFNDGKCSCGDYW 934
            +EIV+RDSNRFH F    CSC DYW
Sbjct: 757 QKEIVVRDSNRFHRFKYATCSCNDYW 782



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 222/474 (46%), Gaps = 75/474 (15%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DVFL N +IN+Y + G LA A  +FD+M  RN VSW  ++SG+   G+  E   +F  ++
Sbjct: 126 DVFLTNHIINMYCKCGHLAYARYVFDQMSHRNIVSWTALISGHAQSGLVRECFSLFSGLL 185

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY----- 133
            A F  N +A  S+L AC+E      K GMQVH + LK +   +  V+N LI MY     
Sbjct: 186 -AHFRPNEFAFASLLSACEE---HDIKCGMQVHAVALKISLDANVYVANSLITMYSKRSG 241

Query: 134 --GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
             G   ++ D A  +F+ +E R+L+SWNS+I+ +  RG       LF+ M   G  +   
Sbjct: 242 FGGGYAQTPDDAWTMFKSMEFRNLVSWNSMIAXFQLRGLGDKAICLFAHMYCNGIGFDRA 301

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQ--QILAMVKKAGLLSDLYVGSALVSGFARL-GNFY 248
                F SL       V++ +YL +  Q+  +  K+GL+S++ V +AL+  +A L G+  
Sbjct: 302 TLLSVFSSLNECGAFDVIN-TYLRKCFQLHCLTIKSGLISEIEVVTALIKSYANLGGHIS 360

Query: 249 YARKIF-EQMIQKNVVSMNGLME------------------------------------- 270
              +IF +   Q ++VS   L+                                      
Sbjct: 361 DCYRIFHDTSSQLDIVSWTALISVFAERDPEQAFLLFCQLHRQSYLPDWYTFSIALKACA 420

Query: 271 ---GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
                +    +H  +I+ G  +   + N L++ YA+CG++  S  VF  M   D VSWN+
Sbjct: 421 YFVTEQHAMAIHSQVIKKGFQEDTVLCNALMHAYARCGSLALSEQVFNEMGCHDLVSWNS 480

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL- 386
           M+     +G  ++A+  F  M    +   + + ++ LS+C+ +G +        EG+KL 
Sbjct: 481 MLKSYAIHGQAKDALELFQQM---NVCPDSATFVALLSACSHVGLV-------DEGVKLF 530

Query: 387 -------GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                  G+   +   + ++ LY  AG +    ++   MP + D V W+S++G+
Sbjct: 531 NSMSDDHGVVPQLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGS 584



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 168/387 (43%), Gaps = 69/387 (17%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLA--------SASKLFDEMPDRNSVSWACIVS 59
           H   LK     +V++ N+LI +Y +              A  +F  M  RN VSW  +++
Sbjct: 214 HAVALKISLDANVYVANSLITMYSKRSGFGGGYAQTPDDAWTMFKSMEFRNLVSWNSMIA 273

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGP-----SGFKFGMQVHCLV 114
            +  +G+ ++A  +F  M   G   +R  L SV  +  ECG      +  +   Q+HCL 
Sbjct: 274 XFQLRGLGDKAICLFAHMYCNGIGFDRATLLSVFSSLNECGAFDVINTYLRKCFQLHCLT 333

Query: 115 LKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR-DLISWNSIISVYSQRGDTIS 173
           +KS    +  V   LI  Y +         RIF +  ++ D++SW ++ISV+++R D   
Sbjct: 334 IKSGLISEIEVVTALIKSYANLGGHISDCYRIFHDTSSQLDIVSWTALISVFAER-DPEQ 392

Query: 174 VFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYV 233
            F LF ++ R+ +     P+ YTF   + A    V     +   I + V K G   D  +
Sbjct: 393 AFLLFCQLHRQSYL----PDWYTFSIALKACAYFVTEQHAM--AIHSQVIKKGFQEDTVL 446

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY------------ 281
            +AL+  +AR G+   + ++F +M   ++VS N ++    K   +HG             
Sbjct: 447 CNALMHAYARCGSLALSEQVFNEMGCHDLVSWNSML----KSYAIHGQAKDALELFQQMN 502

Query: 282 -------------------LIRSG--LFDMVAVGNG----------LVNMYAKCGTIDDS 310
                              L+  G  LF+ ++  +G          +V++Y + G I ++
Sbjct: 503 VCPDSATFVALLSACSHVGLVDEGVKLFNSMSDDHGVVPQLDHYSCMVDLYGRAGKIFEA 562

Query: 311 RSVFRFMIGK-DSVSWNTMISGLDQNG 336
             + R M  K DSV W++++    ++G
Sbjct: 563 EELIRKMPMKPDSVIWSSLLGSCRKHG 589



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 3/112 (2%)

Query: 563 TFATVLSACASVATLERGMEVHACGVR--ACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
           T+A++  ACA    L+ GM +H   +     ++ DV + + +++MY KCG + YA   FD
Sbjct: 92  TYASLFHACAQKKCLQHGMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCGHLAYARYVFD 151

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
            M  RN+ SW ++ISG+A+ G   +  +LFS + L    P+   F  +LSAC
Sbjct: 152 QMSHRNIVSWTALISGHAQSGLVRECFSLFSGL-LAHFRPNEFAFASLLSAC 202



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 38/206 (18%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           + A   H Q++K GF  D  LCN L++ Y R G LA + ++F+EM   + VSW  ++  Y
Sbjct: 426 QHAMAIHSQVIKKGFQEDTVLCNALMHAYARCGSLALSEQVFNEMGCHDLVSWNSMLKSY 485

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKFGMQVHCLVLKSNQ 119
              G + +A ++F++M       +     ++L AC   G    G K        +  S  
Sbjct: 486 AIHGQAKDALELFQQM---NVCPDSATFVALLSACSHVGLVDEGVK--------LFNSMS 534

Query: 120 TFDGLVSNV-----LIAMYGSCLESTDCARRIFEEIE-------TRDLISWNSIISVYSQ 167
              G+V  +     ++ +YG        A +IFE  E         D + W+S++    +
Sbjct: 535 DDHGVVPQLDHYSCMVDLYGR-------AGKIFEAEELIRKMPMKPDSVIWSSLLGSCRK 587

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPN 193
            G+T       +++  + F+  L+PN
Sbjct: 588 HGET-----RLAKLAADKFK-ELEPN 607


>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/572 (38%), Positives = 355/572 (62%), Gaps = 6/572 (1%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           +++CA    +   +++H          D  + N+L+ LY   G +    KVF  M   D 
Sbjct: 58  ITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDM 117

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSW S+I  +A ++ +  EA+     M +  + PNG TF ++L AA + +   +G Q+HA
Sbjct: 118 VSWTSLIAGYAQND-MPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHA 176

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
             +K +   +  + +ALL  Y +CG MD    +F ++ + ++ VSWN++ISG+       
Sbjct: 177 LAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKL-DSKNGVSWNALISGFARKGDGE 235

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
            A+     M++ G    HFT+++V S+ A +  LE+G  VHA  +++  +     G+ L+
Sbjct: 236 TALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLL 295

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           DMY+K G +  A + FD +  +++ +WN+M++ +A++G G +A++ F +M+  G   + V
Sbjct: 296 DMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQV 355

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TF+ +L+ACSH GLV EG ++F+ M + Y L P+++ F  +V LLGRAG L+    FI K
Sbjct: 356 TFLCILTACSHGGLVKEGKRYFEMMKE-YDLEPEIDHFVTVVALLGRAGLLNFALVFIFK 414

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           MPI P + +W  +L AC R + +  ++G+ AA+ +FE++P ++   VLL N+YAS G+W+
Sbjct: 415 MPIEPTAAVWGALLAAC-RMH-KNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWD 472

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
             A+ R+ MK   VKKE  CSWV M++ VH+FVA D++HP  + IY+   ++++K+R  G
Sbjct: 473 AAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKEG 532

Query: 844 YVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR-NSKLPIRIMKNLRVCGDCHSAFK 902
           YVP   + L  ++ + +E  + YHSEK+A+AF L    +   IRIMKN+R+CGDCHSAFK
Sbjct: 533 YVPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFK 592

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +ISK+ GREIV+RD+NRFHHF++G CSC DYW
Sbjct: 593 YISKVFGREIVVRDTNRFHHFSNGSCSCADYW 624



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 191/372 (51%), Gaps = 27/372 (7%)

Query: 441 SEAVKYYLDMRRAG-WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
           + AV   LD+  AG  +P    +   + A +     +   +VHA +     A +  ++N+
Sbjct: 32  ASAVLRDLDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNS 91

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  Y KCG + +  K+F  M  R+D VSW S+I+GY  N++  +A+ L+  M++   + 
Sbjct: 92  LIHLYCKCGSVLEARKVFDEM-RRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKP 150

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           + FTFA++L A  + A    G ++HA  V+     DV +GSAL+DMY++CG +D A+  F
Sbjct: 151 NGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVF 210

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           D +  +N  SWN++ISG+AR G G+ AL  F++M  +G    H T+  V S+ +  G ++
Sbjct: 211 DKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALE 270

Query: 680 EG-------FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI 732
           +G        K  + M+   G        + ++D+  ++G +    +  +++    + + 
Sbjct: 271 QGKWVHAHMIKSRQKMTAFAG--------NTLLDMYAKSGSMIDARKVFDRVD-DKDLVT 321

Query: 733 WRTVLGACCRANCRKTELGRKAANMLFEMEPQ----NAVNYVLLANMYASGGKWEDVAKA 788
           W T+L A  +       LG++A +   EM       N V ++ +    + GG  ++  + 
Sbjct: 322 WNTMLTAFAQYG-----LGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRY 376

Query: 789 RKAMKEAEVKKE 800
            + MKE +++ E
Sbjct: 377 FEMMKEYDLEPE 388



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 188/388 (48%), Gaps = 46/388 (11%)

Query: 190 LKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
           L P    + + ITA A S  L  +  +   LA  + AG   D ++ ++L+  + + G+  
Sbjct: 47  LAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAG---DAFLDNSLIHLYCKCGSVL 103

Query: 249 YARKIFEQMIQKNVVS--------------------MNGLMEGRRK-------------- 274
            ARK+F++M +K++VS                    + G+++GR K              
Sbjct: 104 EARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAG 163

Query: 275 -------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
                  G+++H   ++    + V VG+ L++MYA+CG +D + +VF  +  K+ VSWN 
Sbjct: 164 AHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNA 223

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           +ISG  + G  E A+M F  M R+G  +++F+  S  SS A LG +  G+ +H   +K  
Sbjct: 224 LISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSR 283

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
                   N LL +YA +G +    KVF  + + D V+WN+++ AFA    L  EAV ++
Sbjct: 284 QKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFA-QYGLGKEAVSHF 342

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
            +MR++G   N VTF+ IL A S   + K G +    + +Y++  E      +++  G+ 
Sbjct: 343 EEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRA 402

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISG 535
           G ++       +M        W ++++ 
Sbjct: 403 GLLNFALVFIFKMPIEPTAAVWGALLAA 430



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/434 (23%), Positives = 200/434 (46%), Gaps = 74/434 (17%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +DA+  H  +    FA D FL N+LI++Y + G +  A K+FDEM  ++ VSW  +++GY
Sbjct: 68  EDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGY 127

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
               M  EA  +   M++  F  N +   S+L+A      SG   G Q+H L +K +   
Sbjct: 128 AQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSG--IGRQIHALAVKCDWHE 185

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V + L+ MY  C    D A  +F+++++++ +SWN++IS ++++GD  +    F+ M
Sbjct: 186 DVYVGSALLDMYARC-GMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEM 244

Query: 182 QREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            R GF    +   +T+ S+ +  A   ++  G ++   ++   +K       + G+ L+ 
Sbjct: 245 LRNGF----EATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKM----TAFAGNTLLD 296

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVN 299
            +A+ G+   ARK+F+++  K++V+ N ++                              
Sbjct: 297 MYAKSGSMIDARKVFDRVDDKDLVTWNTMLTA---------------------------- 328

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
            +A+ G            +GK++VS                   +F  MR+ G+  +  +
Sbjct: 329 -FAQYG------------LGKEAVS-------------------HFEEMRKSGIYLNQVT 356

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
            +  L++C+  G +  G++      +  L+ ++     +++L   AG L+  L   F MP
Sbjct: 357 FLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMP 416

Query: 420 -EHDQVSWNSVIGA 432
            E     W +++ A
Sbjct: 417 IEPTAAVWGALLAA 430



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 145/319 (45%), Gaps = 15/319 (4%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H   +K  +  DV++ + L+++Y R G +  A+ +FD++  +N VSW  ++SG+  K
Sbjct: 172 RQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARK 231

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G    A   F EM+R GF    +   SV  +    G    + G  VH  ++KS Q     
Sbjct: 232 GDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLG--ALEQGKWVHAHMIKSRQKMTAF 289

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
             N L+ MY       D AR++F+ ++ +DL++WN++++ ++Q G        F  M++ 
Sbjct: 290 AGNTLLDMYAKSGSMID-ARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKS 348

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G       N+ TF  ++TA     L      ++   M+K+  L  ++     +V+   R 
Sbjct: 349 GIYL----NQVTFLCILTACSHGGLVKEG--KRYFEMMKEYDLEPEIDHFVTVVALLGRA 402

Query: 245 GNFYYARK-IFEQMIQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LV 298
           G   +A   IF+  I+        L+   R  K    G      +F++    +G    L 
Sbjct: 403 GLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLY 462

Query: 299 NMYAKCGTIDDSRSVFRFM 317
           N+YA  G  D +  V R M
Sbjct: 463 NIYASTGQWDAAARVRRIM 481


>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 225/578 (38%), Positives = 344/578 (59%), Gaps = 9/578 (1%)

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           SL+  +SSC S+ +      IH   +K    SD  + + L+S+Y   GY     ++F  M
Sbjct: 124 SLVFAISSCTSVSYC---SAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 180

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR-RAGWSPNGVTFINILAAASSFSMGKL 477
           P  D VSWNS++   +     +   +  +  MR  +G  PN VT +++++A +       
Sbjct: 181 PNKDLVSWNSLMSGLS-GRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDE 239

Query: 478 GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI 537
           G  +H  V+K  ++ +  + N+L++ YGK G +D   ++F  M  R   VSWNSM+  + 
Sbjct: 240 GKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVR-SLVSWNSMVVIHN 298

Query: 538 HNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
           HN    K M+L   M + G   D  T   +L AC       +   +HA   R     D++
Sbjct: 299 HNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADII 358

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           I +AL+++Y+K GR++ +   F+ +  R+  +W +M++GYA H  G +A+ LF  M  +G
Sbjct: 359 IATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEG 418

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
              DHVTF  +LSACSH+GLV+EG K+F+ MS+VY + P+L+ +SCMVDLLGR+G L+  
Sbjct: 419 VEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDA 478

Query: 718 EEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYA 777
            E I  MP+ P+S +W  +LGAC        ELG++ A  L  ++P +  NY++L+N+Y+
Sbjct: 479 YELIKSMPMEPSSGVWGALLGACRVYG--NVELGKEVAEQLLSLDPSDHRNYIMLSNIYS 536

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
           + G W D +K R  MKE  + +  GCS++   + +H FV GD+ HP  D I+ KL+EL +
Sbjct: 537 AAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIR 596

Query: 838 KMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGD 896
           K+R+AG  P+T+F L D++ E K D+++ HSEK+A+AF +L   S +P+ I KNLR+CGD
Sbjct: 597 KIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGD 656

Query: 897 CHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CHS  KF S +  R I++RDS RFHHF DG CSC DYW
Sbjct: 657 CHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 203/453 (44%), Gaps = 73/453 (16%)

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTIS------------VFKLFSRMQ--------REG 185
           +F +  TR  + WNSI+S   + G +IS            + K F R          RE 
Sbjct: 54  VFNQQLTRLAVPWNSIVSPV-RCGTSISHNRSFAFRHTDLIPKQFKRFNTNKGCCIFREA 112

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
            ++ +    Y+    +  A SS  S SY    I A V K+   SD ++G  LVS + +LG
Sbjct: 113 SQFIVV---YSIVQSLVFAISSCTSVSYC-SAIHARVIKSLNYSDGFIGDRLVSMYFKLG 168

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRR-------------------------------- 273
               A+++F++M  K++VS N LM G                                  
Sbjct: 169 YDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVV 228

Query: 274 ----------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                     +GK +HG +++ G+     V N L+NMY K G +D +  +F  M  +  V
Sbjct: 229 SACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLV 288

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SWN+M+   + NG  E+ +  F  M+R G+     ++++ L +C   G     + IH   
Sbjct: 289 SWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYI 348

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
            + G ++D+ ++ ALL+LYA  G L+    +F  + + D+++W +++  +A   A   EA
Sbjct: 349 HRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYA-VHACGREA 407

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSM---GKLGHQVHAQVIKYNVANETTIENAL 500
           +K +  M + G   + VTF ++L+A S   +   GK   ++ ++V  Y V       + +
Sbjct: 408 IKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEV--YRVEPRLDHYSCM 465

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           +   G+ G ++D  ++   M        W +++
Sbjct: 466 VDLLGRSGRLEDAYELIKSMPMEPSSGVWGALL 498



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 211/430 (49%), Gaps = 33/430 (7%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H +++K     D F+ + L+++Y ++G    A +LFDEMP+++ VSW  ++SG + +G 
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 200

Query: 67  ----SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                N  C+M  E   +G   N   L SV+ AC + G      G  +H +V+K   +  
Sbjct: 201 LGACLNAFCRMRTE---SGRQPNEVTLLSVVSACADMG--ALDEGKSLHGVVVKLGMSGK 255

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V N LI MYG  L   D A ++FEE+  R L+SWNS++ +++  G       LF+ M+
Sbjct: 256 AKVVNSLINMYGK-LGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMK 314

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           R G    + P++ T  +L+ A   + L      + I A + + G  +D+ + +AL++ +A
Sbjct: 315 RAG----INPDQATMVALLRACTDTGLGRQ--AESIHAYIHRCGFNADIIIATALLNLYA 368

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGR------RKGKEVHGYLIRSGL-FDMVAVGN 295
           +LG    +  IFE++  ++ ++   ++ G       R+  ++   +++ G+  D V   +
Sbjct: 369 KLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTH 428

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNFCAMRR 350
            L++  +  G +++ +  F  M     V      ++ M+  L ++G  E+A   +  ++ 
Sbjct: 429 -LLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDA---YELIKS 484

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
             +  S+    + L +C   G + LG+++  + L L   SD      L ++Y+ AG    
Sbjct: 485 MPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLD-PSDHRNYIMLSNIYSAAGLWRD 543

Query: 411 CLKVFFLMPE 420
             KV  LM E
Sbjct: 544 ASKVRALMKE 553



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/412 (24%), Positives = 191/412 (46%), Gaps = 59/412 (14%)

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           +N+ C +F+E   + F++    + S++ A   C  +   +   +H  V+KS    DG + 
Sbjct: 102 TNKGCCIFREA--SQFIVVYSIVQSLVFAISSC--TSVSYCSAIHARVIKSLNYSDGFIG 157

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L++MY       D A+R+F+E+  +DL+SWNS++S  S RG   +    F RM+ E  
Sbjct: 158 DRLVSMYFKLGYDED-AQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESG 216

Query: 187 RYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
           R   +PNE T  S+++A A    L     L  +   V K G+     V ++L++ + +LG
Sbjct: 217 R---QPNEVTLLSVVSACADMGALDEGKSLHGV---VVKLGMSGKAKVVNSLINMYGKLG 270

Query: 246 NFYYARKIFEQMIQKNVVSMNGLM----------EGR----------------------- 272
               A ++FE+M  +++VS N ++          +G                        
Sbjct: 271 FLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLR 330

Query: 273 --------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                   R+ + +H Y+ R G    + +   L+N+YAK G ++ S  +F  +  +D ++
Sbjct: 331 ACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIA 390

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ---QIHG 381
           W  M++G   + C  EAI  F  M ++G+   + +    LS+C+  G +  G+   +I  
Sbjct: 391 WTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMS 450

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           E  +  ++  +   + ++ L   +G L    ++   MP E     W +++GA
Sbjct: 451 EVYR--VEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGA 500



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 132/259 (50%), Gaps = 16/259 (6%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H  ++K G +    + N+LIN+Y ++G L +AS+LF+EMP R+ VSW  +V  + 
Sbjct: 239 EGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHN 298

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQ---VHCLVLKSNQ 119
           H G + +   +F  M RAG   ++  + ++LRAC + G      G Q   +H  + +   
Sbjct: 299 HNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTG-----LGRQAESIHAYIHRCGF 353

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D +++  L+ +Y   L   + +  IFEEI+ RD I+W ++++ Y+         KLF 
Sbjct: 354 NADIIIATALLNLYAK-LGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFD 412

Query: 180 RMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
            M +EG    ++ +  TF  L++A ++S ++       +I++ V +     D Y  S +V
Sbjct: 413 LMVKEG----VEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SCMV 466

Query: 239 SGFARLGNFYYARKIFEQM 257
               R G    A ++ + M
Sbjct: 467 DLLGRSGRLEDAYELIKSM 485



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 54/99 (54%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           + A+  H  I + GF  D+ +   L+N+Y ++G L ++  +F+E+ DR+ ++W  +++GY
Sbjct: 339 RQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGY 398

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
                  EA K+F  MV+ G  ++      +L AC   G
Sbjct: 399 AVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSG 437


>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
 gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/657 (36%), Positives = 376/657 (57%), Gaps = 24/657 (3%)

Query: 287 LFDMVAVGN-----GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           +FD +   N      ++  Y +   + D+  +F  M  +D VSWN+MI G    G    A
Sbjct: 34  IFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMA 93

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD---SDVSVSNAL 398
              F  M    ++S      + ++     G + L Q       +L LD    DV+  NA+
Sbjct: 94  TRLFDEMPEKNVIS----WTTMVNGYLKFGRVELAQ-------RLFLDMHVKDVAAWNAM 142

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           +  Y + G +   +++F  MP  D +SW S+IG   D      EA+  +  M R+G  P 
Sbjct: 143 VHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGL-DLNGKSEEALFVFKKMLRSGVEPT 201

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
             TF  +L+A ++     LG QVH  V+K        I  +L++ Y  C +++   KIF 
Sbjct: 202 WSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFN 261

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
             +  ++ V W ++++ Y+ N     A+ +   M + G   +  TF+  L AC  +  L+
Sbjct: 262 E-TLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALD 320

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
           +G E+H   ++  LE DV +G++LV MY++CG ++ A   F  +  +++ SWNS+I G A
Sbjct: 321 KGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSA 380

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
           +HG G  AL  F+QM   G  P+ +TF G+LSACS +G++ +G   F+ +S+    + + 
Sbjct: 381 QHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRP 440

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
           + ++CMVD+LGR G+LD+ EE +  MP+  NS+IW  +L A CR +    E+  +AA  +
Sbjct: 441 QHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSA-CRVH-SNLEVAERAAKHI 498

Query: 759 FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
            ++EP  +  YVLL+N+YAS G+W DV++ R  MK+  + K+ G SWV ++   H F++ 
Sbjct: 499 LDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSA 558

Query: 819 DESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLT 878
           D SHP  + IYEKL  L +K+++ GYVP  KFAL D+E E KE+++S+HSE++A+AF L 
Sbjct: 559 DRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLV 618

Query: 879 RNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
              +   I +MKNLRVCGDCHS  K +SKIVGR+IV+RDS RFHHF +G CSC DYW
Sbjct: 619 STVEGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGRFHHFKNGICSCSDYW 675



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 230/495 (46%), Gaps = 63/495 (12%)

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSD------LYVGSALVSGFARLGNFYYARKIF 254
           IT +Y++ L+     Q++     +A L+ D      L++ + +++G+ R      A K+F
Sbjct: 11  ITLSYTTSLANHLKNQRL----DQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLF 66

Query: 255 EQMIQKNVVSMNGLMEG----------RRKGKE------------VHGYL------IRSG 286
           ++M  ++VVS N +++G           R   E            V+GYL      +   
Sbjct: 67  DRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQR 126

Query: 287 LF-DM----VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           LF DM    VA  N +V+ Y + G +++   +F  M  +D +SW +MI GLD NG  EEA
Sbjct: 127 LFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEA 186

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +  F  M R G+  +  +    LS+CA+     LG Q+HG  +KLG      +S +L++ 
Sbjct: 187 LFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITF 246

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           YA+   +    K+F      + V W +++ A+  +     +A++ + DM + G  PN  T
Sbjct: 247 YANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKH-QDALRVFGDMTKMGALPNQST 305

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           F   L A         G ++H   IK  +  +  + N+L+  Y +CG ++    +F  ++
Sbjct: 306 FSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNIN 365

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
           E +D VSWNS+I G   +     A+     M++RG   +  TF  +LSAC+    L +G 
Sbjct: 366 E-KDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKG- 423

Query: 582 EVHACGVRACLEFDVVIGS---------ALVDMYSKCGRIDYASRFFDLMPVR-NVYSWN 631
                  R   E+     S          +VD+  +CG++D A      MPV+ N   W 
Sbjct: 424 -------RCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWL 476

Query: 632 SMISGYARHGHGDKA 646
           +++S    H + + A
Sbjct: 477 ALLSACRVHSNLEVA 491



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 126/535 (23%), Positives = 237/535 (44%), Gaps = 68/535 (12%)

Query: 16  FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFK 75
            +Y   L N L N       L  A  +FD++P  N   +  +++GYT      +A K+F 
Sbjct: 13  LSYTTSLANHLKN-----QRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFD 67

Query: 76  EM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA--- 131
            M VR     +  +  S+++ C +CG  G             + + FD +    +I+   
Sbjct: 68  RMSVR-----DVVSWNSMIKGCLDCGNLGM------------ATRLFDEMPEKNVISWTT 110

Query: 132 MYGSCLE--STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           M    L+    + A+R+F ++  +D+ +WN+++  Y + G      +LF  M     R  
Sbjct: 111 MVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMP---VRDV 167

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
           +       G  +       L   ++ +++L    ++G+       + ++S  A       
Sbjct: 168 ISWTSMIGGLDLNGKSEEAL---FVFKKML----RSGVEPTWSTFACVLSACA------- 213

Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
                      N V  N        G +VHG++++ G F    +   L+  YA C  I+ 
Sbjct: 214 -----------NAVEFN-------LGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEH 255

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +  +F   + K+ V W  +++    N  +++A+  F  M + G + +  +   TL +C  
Sbjct: 256 AHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCG 315

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           L  +  G++IH   +KLGL++DV V N+L+ +Y + G ++  + VF  + E D VSWNS+
Sbjct: 316 LEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSI 375

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY- 488
           I   A        A+ ++  M R G  PN +TF  +L+A S   M   G      + +Y 
Sbjct: 376 IVGSAQ-HGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYK 434

Query: 489 -NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
            NV         ++   G+CG++D+ E++   M  + + + W +++S   +H+ L
Sbjct: 435 SNVLRPQHYA-CMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNL 488



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 7/200 (3%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K G  +  F+  +LI  Y     +  A K+F+E   +N V W  +++ Y      
Sbjct: 225 HGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKH 284

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            +A ++F +M + G L N+      L+AC  CG      G ++H + +K     D  V N
Sbjct: 285 QDALRVFGDMTKMGALPNQSTFSITLKAC--CGLEALDKGKEIHTMAIKLGLETDVFVGN 342

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY  C  + + A  +F  I  +D++SWNSII   +Q G  +     F++M R G  
Sbjct: 343 SLVVMYTEC-GNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRG-- 399

Query: 188 YSLKPNEYTFGSLITAAYSS 207
             + PNE TF  L++A   S
Sbjct: 400 --VDPNEITFTGLLSACSRS 417



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 46/97 (47%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H   +K G   DVF+ N+L+ +Y   G++ SA  +F  + +++ VSW  I+ G   
Sbjct: 322 GKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQ 381

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G    A   F +M+R G   N      +L AC   G
Sbjct: 382 HGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSG 418


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 250/719 (34%), Positives = 395/719 (54%), Gaps = 18/719 (2%)

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV----VSMNGLMEG------RRKGKE 277
           + D+   S++V  F + G       +F QMI + V    V+M  + E        R G+ 
Sbjct: 163 IRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRS 222

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VHGY++R  +    ++ N L+ MY K G +  +  +F  +  + +  W  MIS  +Q+GC
Sbjct: 223 VHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGC 282

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS-VSN 396
           ++EA+  F  M+   +  +  +++  L +CA LG +  G+ +HG  ++  +D ++  +  
Sbjct: 283 FQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGP 342

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           AL+ LYAD G L  C KVF  + E   +SWN++I  F  +     EA+  ++ M+  G  
Sbjct: 343 ALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRN-GQPEEALLLFVQMQTQGLM 401

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P+  +  + L+A  + S  +LG Q+H  +IK    N+  ++NAL+  Y KCG +    K+
Sbjct: 402 PDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGFVHSANKM 460

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F ++ E+   V+WNSMI G+  N    +A+ L   M     ++D  TF +V+ AC+ +  
Sbjct: 461 FEKIKEK-SLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGY 519

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           LE+G  VH   +   L  D  + +AL DMYSKCG +  A   FD M  R++ SW+ MI+G
Sbjct: 520 LEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAG 579

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           Y  HG  +  ++LF+QM   G  P+ +TF+ +LSACSHAG V+EG  +F SMS+ +G+ P
Sbjct: 580 YGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSE-FGVEP 638

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAAN 756
           + + F+CMVDLL RAG+L+   + I  +P   NS IW  +L   CR + ++ ++ +    
Sbjct: 639 KHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNG-CRIH-KRIDIIKSIEK 696

Query: 757 MLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV 816
            L +++  +   Y LL+N+YA  G W+   K R  MK   ++K  G S + +   ++ F 
Sbjct: 697 NLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFG 756

Query: 817 AGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF- 875
            GD SH +   IY  L+     +    Y  +   ++      +KE+ V  HSEK+A+AF 
Sbjct: 757 PGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENNVVSHSEKLAIAFG 816

Query: 876 VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           ++       +RI KNLRVC DCHS  K  SKI GREI++RD NRFH F +G CSC DYW
Sbjct: 817 IINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 875



 Score =  245 bits (626), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 191/665 (28%), Positives = 327/665 (49%), Gaps = 60/665 (9%)

Query: 26  LINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV-RAGFLL 84
           LI  Y ++G   S+ ++FD  P  +S  W  ++  Y   G   EA  ++ EMV +    +
Sbjct: 39  LIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQI 98

Query: 85  NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG--SCLESTDC 142
           + +   SVL+AC   G      G +VH  V+K     D +V   L+ MYG  SCL   D 
Sbjct: 99  SNFVFPSVLKACS--GFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCL---DD 153

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A + F+ +  RD+++W+SI+  + Q G       +FS+M  E    +++P+  T  S+  
Sbjct: 154 ACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISE----AVEPDSVTMLSVTE 209

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM----- 257
           A   S L    L + +   V +  + S+  + ++L+  + +LG+ Y A ++FE +     
Sbjct: 210 AC--SELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMT 267

Query: 258 ------------------------------IQKNVVSMNGLM-----EGR-RKGKEVHGY 281
                                         ++ N V+M G++      GR ++G+ VHG+
Sbjct: 268 APWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGF 327

Query: 282 LIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
           +IR  +  ++  +G  L+ +YA  G + D   VF  +  K  +SWNT+IS   +NG  EE
Sbjct: 328 VIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEE 387

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A++ F  M+  GLM  ++SL S+LS+C ++ +  LG QIHG  +K G  +D  V NAL+ 
Sbjct: 388 ALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALID 446

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +YA  G++    K+F  + E   V+WNS+I  F+ +   V EA+  +  M       + +
Sbjct: 447 MYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSV-EAITLFDQMYMNCVKMDKL 505

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           TF++++ A S     + G  VH ++I Y +  ++ ++ AL   Y KCGE+     +F RM
Sbjct: 506 TFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRM 565

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
           SE R  VSW+ MI+GY  +  +   ++L   M+  G + +  TF  +LSAC+    +E G
Sbjct: 566 SE-RSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEG 624

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYAR 639
                      +E      + +VD+ S+ G ++ A +    +P   N   W ++++G   
Sbjct: 625 KLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRI 684

Query: 640 HGHGD 644
           H   D
Sbjct: 685 HKRID 689



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 240/452 (53%), Gaps = 7/452 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G +VHG +I+ G      V   L+ MY +   +DD+   F  M  +D V+W++++    Q
Sbjct: 119 GGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQ 178

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG   E +  F  M  + +   + +++S   +C+ LG + LG+ +HG  ++  ++S+ S+
Sbjct: 179 NGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASL 238

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           +N+L+ +Y   G L    ++F  +P      W  +I  +  S     EA+  +  M+   
Sbjct: 239 NNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQS-GCFQEALNVFAKMQEFK 297

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT-IENALLSCYGKCGEMDDC 513
             PN VT + +L A +     K G  VH  VI+  +  E   +  AL+  Y   G + DC
Sbjct: 298 MEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDC 357

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            K+F  + E+   +SWN++IS +  N    +A+ L   M  +G   D ++ A+ LSAC +
Sbjct: 358 HKVFETIKEKTI-LSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGT 416

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           ++  + G ++H   ++    F+  + +AL+DMY+KCG +  A++ F+ +  +++ +WNSM
Sbjct: 417 ISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSM 475

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG-FKHFKSMSQVY 692
           I G++++G+  +A+TLF QM ++    D +TF+ V+ ACSH G +++G + H K +  +Y
Sbjct: 476 ICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLI--MY 533

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           GL       + + D+  + GEL       ++M
Sbjct: 534 GLRKDSYLDTALTDMYSKCGELQMAHGVFDRM 565



 Score =  205 bits (522), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 150/579 (25%), Positives = 263/579 (45%), Gaps = 58/579 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H +++K GF  D  +  +L+ +Y  +  L  A K FD MP R+ V+W+ IV  +   G +
Sbjct: 123 HGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQA 182

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           +E   MF +M+      +   + SV  AC E G    + G  VH  V++     +  ++N
Sbjct: 183 SEGLDMFSQMISEAVEPDSVTMLSVTEACSELG--SLRLGRSVHGYVVRREIESNASLNN 240

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI MYG  L     A R+FE +  R    W  +IS Y+Q G       +F++MQ     
Sbjct: 241 SLIVMYGK-LGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQ----E 295

Query: 188 YSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDL-YVGSALVSGFARL 244
           + ++PN+ T   ++ A      V  G    + +   V +  +  +L ++G AL+  +A  
Sbjct: 296 FKMEPNQVTMVGVLCACARLGRVKEG----RSVHGFVIRRAMDPELDFLGPALMELYADT 351

Query: 245 GNFYYARKIFEQMIQKNVVSMN-------------------------GLMEG-------- 271
           GN     K+FE + +K ++S N                         GLM          
Sbjct: 352 GNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSL 411

Query: 272 --------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                    + G ++HGY+I++G F+   V N L++MYAKCG +  +  +F  +  K  V
Sbjct: 412 SACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGFVHSANKMFEKIKEKSLV 470

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           +WN+MI G  QNG   EAI  F  M  + +     + +S + +C+ LG++  G+ +H + 
Sbjct: 471 TWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKL 530

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           +  GL  D  +  AL  +Y+  G L     VF  M E   VSW+ +I  +      ++  
Sbjct: 531 IMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYG-MHGQINAT 589

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           +  +  M  +G  PN +TF++IL+A S     + G      + ++ V  +      ++  
Sbjct: 590 ISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDL 649

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
             + G+++   +I   +    +   W ++++G  IH  +
Sbjct: 650 LSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRI 688



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 224/467 (47%), Gaps = 20/467 (4%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           ++H +L  +GL         L+  YA+ G  + S+ VF      DS  W  +I      G
Sbjct: 19  QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 78

Query: 337 CYEEAIMNFCAM-RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
            +EEA+  +  M  +D    SNF   S L +C+  G + +G ++HG  +K G +SD  V 
Sbjct: 79  FFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVE 138

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
            +LL +Y +   L    K F  MP  D V+W+S++  F  +    SE +  +  M     
Sbjct: 139 TSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQN-GQASEGLDMFSQMISEAV 197

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            P+ VT +++  A S     +LG  VH  V++  + +  ++ N+L+  YGK G++   E+
Sbjct: 198 EPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAER 257

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F  +  R     W  MIS Y  +    +A+N+   M +     +  T   VL ACA + 
Sbjct: 258 LFENVPCRM-TAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLG 316

Query: 576 TLERGMEVHACGVRACLEFDV-VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
            ++ G  VH   +R  ++ ++  +G AL+++Y+  G +    + F+ +  + + SWN++I
Sbjct: 317 RVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLI 376

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
           S + R+G  ++AL LF QM+  G +PD  +    LSAC        G       +Q++G 
Sbjct: 377 SIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLG-------AQIHGY 429

Query: 695 IPQLEQF-----SCMVDLLGRAGELDKIEEFINKMP----ITPNSLI 732
           I +   F     + ++D+  + G +    +   K+     +T NS+I
Sbjct: 430 IIKTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMI 476



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 162/379 (42%), Gaps = 44/379 (11%)

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           Q+HA +    +         L+  Y + G  +  +++F     + D   W  +I  Y+  
Sbjct: 19  QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFP-KPDSFMWGVLIKCYVWG 77

Query: 540 ELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
               +A++L   M+ + Q ++ +F F +VL AC+    L  G +VH   ++   E D V+
Sbjct: 78  GFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVV 137

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            ++L+ MY +   +D A + FD MP+R+V +W+S++  + ++G   + L +FSQM  +  
Sbjct: 138 ETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAV 197

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS------CMVDLLGRAG 712
            PD VT + V  ACS  G +  G         V+G + + E  S       ++ + G+ G
Sbjct: 198 EPDSVTMLSVTEACSELGSLRLG-------RSVHGYVVRREIESNASLNNSLIVMYGKLG 250

Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLL 772
           +L   E     +P    +  W  ++    ++ C +  L   A    F+MEP    N V +
Sbjct: 251 DLYSAERLFENVPCRMTA-PWTPMISCYNQSGCFQEALNVFAKMQEFKMEP----NQVTM 305

Query: 773 ANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKL 832
             +  +  +   V + R                      VH FV      PE D +   L
Sbjct: 306 VGVLCACARLGRVKEGRS---------------------VHGFVIRRAMDPELDFLGPAL 344

Query: 833 KEL---NQKMRDAGYVPQT 848
            EL      +RD   V +T
Sbjct: 345 MELYADTGNLRDCHKVFET 363



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H +++ +G   D +L   L ++Y + G+L  A  +FD M +R+ VSW+ +++GY
Sbjct: 521 EKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGY 580

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G  N    +F +M+ +G   N      +L AC   G
Sbjct: 581 GMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAG 619


>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 257/785 (32%), Positives = 409/785 (52%), Gaps = 79/785 (10%)

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------ 274
           L  D+++G+AL+S + +LG    A K+F  +   NVVS   L+ G  K            
Sbjct: 126 LEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFF 185

Query: 275 -----------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
                                        G +VHG +++ GL   V + N L+ +Y KCG
Sbjct: 186 AMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCG 245

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR-DGLMSSNFSLISTL 364
            +D    +F  M  +D  SWNT+IS L +   Y+EA   F  M+   GL   +FSL + L
Sbjct: 246 FLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLL 305

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
           ++CA     M GQQ+H   LK+GL+S +SVS++L+  Y   G  +    +F  MP  D +
Sbjct: 306 TACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVI 365

Query: 425 SWNSVIGAFA-----DSEALV-------------------------SEAVKYYLDMRRAG 454
           +W  +I ++      DS   V                         S A++ +++M   G
Sbjct: 366 TWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEG 425

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
              +  T  +I+ A       K+  Q+   V+K+ + + + IE AL+  Y +CG M+D E
Sbjct: 426 VEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAE 485

Query: 515 KIFARMSERRDEVS-WNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACA 572
           KIF + S   D  +   SMI GY  N  L +A++L       G   +D     ++LS C 
Sbjct: 486 KIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCG 545

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
           S+   E GM++H   +++ L  +  +G+A V MYSKC  +D A R F+ M ++++ SWN 
Sbjct: 546 SIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNG 605

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA--GLVDEGFKHFKSMSQ 690
           +++G+  H  GDKAL ++ +M+  G  PD +TF  ++SA  H    LVD     F SM  
Sbjct: 606 LVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMET 665

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
            + + P LE ++  + +LGR G L++ E+ I  MP+ P+  +WR +L + CR N +   L
Sbjct: 666 EHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNS-CRIN-KNERL 723

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
            + AA  +  +EP++ ++Y+L +N+Y++ G+W    K R+ M+E   +K    SW+  ++
Sbjct: 724 EKLAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHEN 783

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
            +H F A D SHP+   IY  L+ L  +    GYVP T F L ++E   K++ + YHS K
Sbjct: 784 KIHSFYARDRSHPQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGK 843

Query: 871 IAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +A  F +L      PI+I+KN+R+CGDCH+  K++S +  R+I+LRD++ FH F DG+CS
Sbjct: 844 LAATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCS 903

Query: 930 CGDYW 934
           C DYW
Sbjct: 904 CTDYW 908



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 171/645 (26%), Positives = 304/645 (47%), Gaps = 60/645 (9%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H Q LK     D+FL N LI+ Y+++G +  A K+F  +   N VS+  ++SG++ 
Sbjct: 116 ARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSK 173

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
               +EA ++F  M+ +G   N Y   ++L AC       ++ G QVH +V+K       
Sbjct: 174 SDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIR--NMDYQLGSQVHGIVVKLGLLSCV 231

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            + N L+ +Y  C    D   R+FEE+  RD+ SWN++IS   +       F  F  MQ 
Sbjct: 232 FICNALMGLYCKC-GFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQ- 289

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSV--LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
                 LK + ++  +L+TA   SV  + G    QQ+ A+  K GL S L V S+L+  +
Sbjct: 290 --LCKGLKVDHFSLSTLLTACAGSVKPMKG----QQLHALALKVGLESHLSVSSSLIGFY 343

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
            + G+      +FE M  ++V++                               G++  Y
Sbjct: 344 TKCGSANDVTDLFETMPIRDVITW-----------------------------TGMITSY 374

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
            + G +D +  VF  M  ++ +S+N +++GL +N     A+  F  M  +G+  S+ +L 
Sbjct: 375 MEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLT 434

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-E 420
           S +++C  L    + QQI G  +K G+ S+  +  AL+ +Y   G +    K+F+    E
Sbjct: 435 SIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLE 494

Query: 421 HDQVS-WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
           +D  +   S+I  +A +  L      ++          + V   +IL+   S    ++G 
Sbjct: 495 NDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGM 554

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           Q+H   +K  +  ET + NA +S Y KC  MDD  ++F  M+  +D VSWN +++G++ +
Sbjct: 555 QMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMN-MQDIVSWNGLVAGHVLH 613

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSA--------CASVATLERGMEVHACGVRAC 591
               KA+ +   M + G + D  TFA ++SA          S  +L   ME     ++  
Sbjct: 614 WQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEH-NIKPT 672

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMIS 635
           LE      ++ + +  + G ++ A +    MP+  +VY W ++++
Sbjct: 673 LEH----YASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLN 713



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 232/486 (47%), Gaps = 42/486 (8%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            + VH   ++  L + + +GN L++ Y K G + D+  VF  +   + VS+  +ISG  +
Sbjct: 116 ARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSK 173

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +   +EA+  F AM   G+  + ++ ++ L++C       LG Q+HG  +KLGL S V +
Sbjct: 174 SDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFI 233

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA- 453
            NAL+ LY   G+L   L++F  MPE D  SWN+VI +    E    EA  Y+  M+   
Sbjct: 234 CNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLV-KEFKYDEAFDYFRGMQLCK 292

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G   +  +   +L A +       G Q+HA  +K  + +  ++ ++L+  Y KCG  +D 
Sbjct: 293 GLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDV 352

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELL----------PK------------------- 544
             +F  M   RD ++W  MI+ Y+   +L          PK                   
Sbjct: 353 TDLFETMP-IRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDG 411

Query: 545 --AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
             A+ L   M++ G  +   T  ++++AC  + + +   ++    ++  +  +  I +AL
Sbjct: 412 SRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETAL 471

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYS--WNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           VDMY++CGR++ A + F    + N Y+    SMI GYAR+G  ++A++LF   + +G + 
Sbjct: 472 VDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIV 531

Query: 661 -DHVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
            D V    +LS C   G  + G + H  ++    GLI +    +  V +  +   +D   
Sbjct: 532 MDEVMSTSILSLCGSIGFHEMGMQMHCHALKS--GLITETGVGNATVSMYSKCWNMDDAV 589

Query: 719 EFINKM 724
              N M
Sbjct: 590 RVFNTM 595


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/628 (38%), Positives = 361/628 (57%), Gaps = 11/628 (1%)

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM-RRDGLMSSNFSLISTLSSCASL 370
           SVF      D ++WN+M+     +     A+ ++  M  R   +   F+  S L  CA L
Sbjct: 33  SVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALL 92

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
               +G+ +HG+ +K  L SD+ +   LL++YA  G L     +F  M   ++V W S+I
Sbjct: 93  LEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMI 152

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
             +  +    +EA+  Y  M   G+SP+ VT   +++A +      +G ++H+ + + ++
Sbjct: 153 SGYMKNHC-PNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDM 211

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
                + +AL++ Y KCG++    ++F ++S++ D  +W+++I GY+ N    +A+ L  
Sbjct: 212 KICAVLGSALVNMYAKCGDLKTARQVFDKLSDK-DVYAWSALIFGYVKNNRSTEALQL-- 268

Query: 551 FMMQRG---QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
           F    G    R +  T   V+SACA +  LE G  VH    R      V + ++L+DM+S
Sbjct: 269 FREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFS 328

Query: 608 KCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVG 667
           KCG ID A R FD M  +++ SWNSM++G+A HG G +AL  F  M+     PD +TF+G
Sbjct: 329 KCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIG 388

Query: 668 VLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPIT 727
           VL+ACSHAGLV EG K F  +  +YG+  + E + CMVDLL RAG L +  EFI  MP+ 
Sbjct: 389 VLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQ 448

Query: 728 PNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
           P+  IW ++LGAC   N    ELG +AA  L ++EP N   Y+LL+N+YA    W +V K
Sbjct: 449 PDGAIWGSMLGACRVYN--NLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKK 506

Query: 788 ARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQ 847
            R+ M E  ++K  GCS V + +  H F+AGD SHPE   I   L+++ +K++ AGYV  
Sbjct: 507 VRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVAD 566

Query: 848 TKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNS-KLPIRIMKNLRVCGDCHSAFKFISK 906
           T   L +++   KE+ VS HSEK+A+ + L ++     I I+KNLRVC DCH+  K +SK
Sbjct: 567 TSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSK 626

Query: 907 IVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           I  R+I LRD NRFHHF DG CSC DYW
Sbjct: 627 IYQRQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 192/369 (52%), Gaps = 17/369 (4%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK +HG +++  L   + +   L+NMYA CG +  +R +F  M  ++ V W +MISG  +
Sbjct: 98  GKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMK 157

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N C  EA++ +  M  DG      ++ + +S+CA L  + +G ++H    ++ +     +
Sbjct: 158 NHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVL 217

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            +AL+++YA  G L    +VF  + + D  +W+++I  +  +    +EA++ + ++  AG
Sbjct: 218 GSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNR-STEALQLFREV--AG 274

Query: 455 WS---PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
            S   PN VT + +++A +     + G  VH  + +    +  ++ N+L+  + KCG++D
Sbjct: 275 GSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDID 334

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
             ++IF  MS  +D +SWNSM++G+  + L  +A+     M     + D  TF  VL+AC
Sbjct: 335 AAKRIFDSMS-YKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTAC 393

Query: 572 ASVATLERG----MEVHAC-GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR- 625
           +    ++ G     E+ A  GVR   E        +VD+  + G +  A  F  +MP++ 
Sbjct: 394 SHAGLVQEGKKLFYEIEALYGVRLKSEH----YGCMVDLLCRAGLLAEAREFIRVMPLQP 449

Query: 626 NVYSWNSMI 634
           +   W SM+
Sbjct: 450 DGAIWGSML 458



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/485 (24%), Positives = 222/485 (45%), Gaps = 58/485 (11%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLAS--ASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACK 72
           GF +     N LI   + +G L    A  +F    + + ++W  ++  + +  M   A +
Sbjct: 5   GFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQ 64

Query: 73  MFKEMV-RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
            + EM+ R+  + +R+   S+L+ C       FK G  +H  V+K     D  +   L+ 
Sbjct: 65  SYTEMLERSRNVPDRFTFPSLLKGCALLLE--FKVGKVLHGQVVKYMLHSDLYIETTLLN 122

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY +C +    AR +FE +  R+ + W S+IS Y +         L+ +M+ +GF     
Sbjct: 123 MYAACGD-LKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGF----S 177

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           P+E T  +L++A   + L    +  ++ + +++  +     +GSALV+ +A+ G+   AR
Sbjct: 178 PDEVTMATLVSAC--AELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTAR 235

Query: 252 KIFEQMIQKNVVSMNGLMEGRRK------------------------------------- 274
           ++F+++  K+V + + L+ G  K                                     
Sbjct: 236 QVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQL 295

Query: 275 -----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
                G+ VH Y+ R+     V++ N L++M++KCG ID ++ +F  M  KD +SWN+M+
Sbjct: 296 GDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMV 355

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GL 388
           +G   +G   EA+  F  M+   L     + I  L++C+  G +  G+++  E   L G+
Sbjct: 356 NGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGV 415

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA--FADSEALVSEAVK 445
                    ++ L   AG L+   +   +MP + D   W S++GA    ++  L  EA +
Sbjct: 416 RLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAAR 475

Query: 446 YYLDM 450
           + L +
Sbjct: 476 FLLKL 480



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 143/271 (52%), Gaps = 10/271 (3%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K+ H Q++K+    D+++  TL+N+Y   GDL SA  LF+ M  RN V W  ++SGY
Sbjct: 96  KVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGY 155

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                 NEA  ++K+M   GF  +   + +++ AC E    G   GM++H  + + +   
Sbjct: 156 MKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLG--VGMKLHSHIREMDMKI 213

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
             ++ + L+ MY  C +    AR++F+++  +D+ +W+++I  Y +   +    +LF  +
Sbjct: 214 CAVLGSALVNMYAKCGD-LKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREV 272

Query: 182 QREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
                  +++PNE T  ++I+A A    L     +   +   +K   +S   + ++L+  
Sbjct: 273 AGGS---NMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVS---LNNSLIDM 326

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           F++ G+   A++IF+ M  K+++S N ++ G
Sbjct: 327 FSKCGDIDAAKRIFDSMSYKDLISWNSMVNG 357


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 257/747 (34%), Positives = 399/747 (53%), Gaps = 55/747 (7%)

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------ 272
           L +G+A++S   R G  ++A ++F +M +++V S N ++ G                   
Sbjct: 123 LRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMW 182

Query: 273 -----------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
                                  R G+EVH +++R G  + V V N L+ MYAKCG +  
Sbjct: 183 AGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMA 242

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +R VF  M   D +SWN MI+G  +NG     +  F  M  D +  +  ++ S   +   
Sbjct: 243 ARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGL 302

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           L  +   +++HG  +K G   DV+  N+L+ +YA  G + +   VF  M   D ++W ++
Sbjct: 303 LSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAM 362

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           I  + +      +A++ Y  M     SP+ +T  + LAA +      +G ++H       
Sbjct: 363 ISGY-EKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKG 421

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV 549
             +   + NA+L  Y K   +D   ++F  M E+ D VSW+SMI+G+  N    +A+   
Sbjct: 422 FISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEK-DVVSWSSMIAGFCFNHRNFEALYYF 480

Query: 550 WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
             M+    + +  TF   L+ACA+   L  G E+HA  +R  +E++  + +AL+D+Y KC
Sbjct: 481 RHMLA-DVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKC 539

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
           G+  YA   F     ++V SWN MI+G+  HGHGD AL+ F+QM   G  PD VTFV +L
Sbjct: 540 GQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALL 599

Query: 670 SACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPN 729
            ACS  G+V EG++ F SM++ Y ++P L+ ++CMVDLL RAG+L +   FIN+MPITP+
Sbjct: 600 CACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPD 659

Query: 730 SLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKAR 789
           + +W  +L   CR + R  ELG  AA  +  +EP +A  +VLL ++YA    W+ +A+ R
Sbjct: 660 AAVWGALLNG-CRIH-RHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVR 717

Query: 790 KAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTK 849
           K M+E  +  ++GCSWV +K  VH F+  DESHP+   I   L+ + ++M+ +GY P   
Sbjct: 718 KTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYAPVES 777

Query: 850 FALFDLEPES---KEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFIS 905
                  PE    K+D+   HSE++AVAF L   +    I + KN   C  CH   K IS
Sbjct: 778 HC-----PEDEVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMIS 832

Query: 906 KIVGREIVLRDSNRFHHFNDGKCSCGD 932
            IV R+I++RDS + HHF DG CSCGD
Sbjct: 833 NIVRRDIIVRDSKQLHHFKDGSCSCGD 859



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 160/604 (26%), Positives = 284/604 (47%), Gaps = 76/604 (12%)

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
           R A+   LRAC         FG+++                N +++M     E+   A R
Sbjct: 101 RRAVEPGLRACAHADDRHAWFGLRL---------------GNAMLSMLVRFGETWH-AWR 144

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           +F ++  RD+ SWN ++  Y + G       L+ RM   G R    P+ YTF  ++ +  
Sbjct: 145 VFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVR----PDVYTFPCVLRSCG 200

Query: 206 SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
              +    + +++ A V + G   ++ V +AL++ +A+ G+   ARK+F+ M   + +S 
Sbjct: 201 G--VPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISW 258

Query: 266 NGLMEGRRK-----------------------------------------GKEVHGYLIR 284
           N ++ G  +                                          KE+HG  ++
Sbjct: 259 NAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVK 318

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
            G    VA  N L+ MYA  G +  +R+VF  M  +D+++W  MISG ++NG  ++A+  
Sbjct: 319 RGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEV 378

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           +  M  + +   + ++ S L++CA LG + +G ++H      G  S + V+NA+L +YA 
Sbjct: 379 YALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAK 438

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFA----DSEALVSEAVKYYLDMRRAGWSPNGV 460
           +  + + ++VF  M E D VSW+S+I  F     + EAL      YY     A   PN V
Sbjct: 439 SKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEAL------YYFRHMLADVKPNSV 492

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           TFI  LAA ++    + G ++HA V++  +  E  + NAL+  Y KCG+       F   
Sbjct: 493 TFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAH 552

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
              +D VSWN MI+G++ +     A++    M++ G+  D  TF  +L AC+    +  G
Sbjct: 553 GA-KDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEG 611

Query: 581 MEV-HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYA 638
            E+ H+   +  +  ++   + +VD+ S+ G++  A  F + MP+  +   W ++++G  
Sbjct: 612 WELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCR 671

Query: 639 RHGH 642
            H H
Sbjct: 672 IHRH 675



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 144/556 (25%), Positives = 255/556 (45%), Gaps = 53/556 (9%)

Query: 22  LCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAG 81
           L N ++++ VR G+   A ++F +MP+R+  SW  +V GY   G+ +EA  ++  M+ AG
Sbjct: 125 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAG 184

Query: 82  FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD 141
              + Y    VLR+C   G   ++ G +VH  VL+     +  V N L+ MY  C +   
Sbjct: 185 VRPDVYTFPCVLRSCG--GVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVM- 241

Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
            AR++F+ +   D ISWN++I+ + + G+  +  +LF  M  +     ++PN  T  S+ 
Sbjct: 242 AARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHD----EVQPNLMTITSVT 297

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
            A  S +LS     +++  +  K G   D+   ++L+  +A LG    AR +F +M  ++
Sbjct: 298 VA--SGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRD 355

Query: 262 VVSMNGLMEGRRK-----------------------------------------GKEVHG 280
            ++   ++ G  K                                         G ++H 
Sbjct: 356 AMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHE 415

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
                G    + V N ++ MYAK   ID +  VF+ M  KD VSW++MI+G   N    E
Sbjct: 416 LAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFE 475

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A+  F  M  D +  ++ + I+ L++CA+ G +  G++IH   L+ G++ +  + NAL+ 
Sbjct: 476 ALYYFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALID 534

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           LY   G        F      D VSWN +I  F  +      A+ ++  M + G  P+ V
Sbjct: 535 LYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFV-AHGHGDTALSFFNQMVKIGECPDEV 593

Query: 461 TFINILAAASSFSMGKLGHQV-HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           TF+ +L A S   M   G ++ H+   KY++         ++    + G++ +       
Sbjct: 594 TFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINE 653

Query: 520 MSERRDEVSWNSMISG 535
           M    D   W ++++G
Sbjct: 654 MPITPDAAVWGALLNG 669



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 111/466 (23%), Positives = 208/466 (44%), Gaps = 53/466 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +L+ GF  +V + N L+ +Y + GD+ +A K+FD M   + +SW  +++G+   G  
Sbjct: 212 HAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGEC 271

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           N   ++F  M+      N   + SV  A      S   F  ++H L +K     D    N
Sbjct: 272 NAGLELFLTMLHDEVQPNLMTITSVTVASGLL--SDVTFAKEMHGLAVKRGFAGDVAFCN 329

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI MY S L     AR +F  ++TRD ++W ++IS Y + G      ++++ M+     
Sbjct: 330 SLIQMYAS-LGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVN--- 385

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQ-QILAMVKKAGLLSDLYVGSALVSGFARLGN 246
            ++ P++ T   + +A  +    GS  +  ++  + +  G +S + V +A++  +A+   
Sbjct: 386 -NVSPDDIT---IASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKR 441

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG----------------------------------- 271
              A ++F+ M +K+VVS + ++ G                                   
Sbjct: 442 IDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVKPNSVTFIAALAAC 501

Query: 272 -----RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                 R GKE+H +++R G+     + N L+++Y KCG    + + F     KD VSWN
Sbjct: 502 AATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWN 561

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI-HGEGLK 385
            MI+G   +G  + A+  F  M + G      + ++ L +C+  G +  G ++ H    K
Sbjct: 562 IMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEK 621

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI 430
             +  ++     ++ L + AG L+        MP   D   W +++
Sbjct: 622 YSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALL 667



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 196/455 (43%), Gaps = 52/455 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H   +K GFA DV  CN+LI +Y  +G +  A  +F  M  R++++W  ++SGY  
Sbjct: 309 AKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEK 368

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G  ++A +++  M       +   + S L AC   G      G+++H L          
Sbjct: 369 NGFPDKALEVYALMEVNNVSPDDITIASALAACACLG--SLDVGVKLHELAESKGFISYI 426

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +V+N ++ MY    +  D A  +F+ +  +D++SW+S+I+ +            F  M  
Sbjct: 427 VVTNAILEMYAKS-KRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLA 485

Query: 184 EGFRYSLKPNEYTF--GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           +     +KPN  TF       AA  ++ SG    ++I A V + G+  + Y+ +AL+  +
Sbjct: 486 D-----VKPNSVTFIAALAACAATGALRSG----KEIHAHVLRCGIEYEGYLPNALIDLY 536

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN------ 295
            + G   YA   F     K+VVS N ++ G       HG    S    MV +G       
Sbjct: 537 VKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFV--AHGHGDTALSFFNQMVKIGECPDEVT 594

Query: 296 --GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
              L+   ++ G + +   +F  M  K S+     +  L    C  +       + R G 
Sbjct: 595 FVALLCACSRGGMVSEGWELFHSMTEKYSI-----VPNLKHYACMVD------LLSRAGQ 643

Query: 354 MSSNFSLISTL---SSCASLGWIMLGQQIH-----GE---GLKLGLDSDVSVSNALL-SL 401
           ++  ++ I+ +      A  G ++ G +IH     GE      L L+ + +  + LL  L
Sbjct: 644 LTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDL 703

Query: 402 YADAGYLSRCLKVFFLMPE----HDQ-VSWNSVIG 431
           YADA    +  +V   M E    HD   SW  V G
Sbjct: 704 YADACLWDKLARVRKTMREKGLDHDSGCSWVEVKG 738



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 60/124 (48%)

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
           +W +    +  D   +  +   C     +E G+   A        F + +G+A++ M  +
Sbjct: 76  LWLLESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVR 135

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
            G   +A R F  MP R+V+SWN M+ GY + G  D+AL L+ +M   G  PD  TF  V
Sbjct: 136 FGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCV 195

Query: 669 LSAC 672
           L +C
Sbjct: 196 LRSC 199



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 48/99 (48%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  +L+ G  Y+ +L N LI++YV+ G    A   F     ++ VSW  +++G+
Sbjct: 508 RSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGF 567

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G  + A   F +MV+ G   +     ++L AC   G
Sbjct: 568 VAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGG 606


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/670 (35%), Positives = 384/670 (57%), Gaps = 13/670 (1%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +G +VH YL++SG    +   N L++MY KC     +  VF  M  ++ VSW+ ++SG  
Sbjct: 24  QGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHV 83

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            NG  + ++  F  M R G+  + F+  + L +C  L  +  G QIHG  LK+G +  V 
Sbjct: 84  LNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE 143

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V N+L+ +Y+  G ++   KVF  + +   +SWN++I  F  +    S+A+  +  M+ A
Sbjct: 144 VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA-GYGSKALDTFGMMQEA 202

Query: 454 GWS--PNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTIENALLSCYGKCGE 509
                P+  T  ++L A SS  M   G Q+H  +++  ++  +  TI  +L+  Y KCG 
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           +    K F ++ E+   +SW+S+I GY       +AM L   + +   ++D F  ++++ 
Sbjct: 263 LFSARKAFDQIKEK-TMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIG 321

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
             A  A L +G ++ A  V+     +  + +++VDMY KCG +D A + F  M +++V S
Sbjct: 322 VFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVIS 381

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           W  +I+GY +HG G K++ +F +M      PD V ++ VLSACSH+G++ EG + F  + 
Sbjct: 382 WTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLL 441

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
           + +G+ P++E ++C+VDLLGRAG L + +  I+ MPI PN  IW+T+L + CR +    E
Sbjct: 442 ETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL-SLCRVH-GDIE 499

Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMK 809
           LG++   +L  ++ +N  NYV+++N+Y   G W +   AR+      +KKEAG SWV ++
Sbjct: 500 LGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIE 559

Query: 810 DGVHVFVAGDESHPEKDLIYEKLKELNQKMRDA-GYVPQTKFALFDLEPESKEDLVSYHS 868
             VH F +G++SHP   +I E LKE  +++R+  GYV   K  L D++ ESKE+ +  HS
Sbjct: 560 REVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHS 619

Query: 869 EKIAVAFVLTR---NSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFN 924
           EK+A+   L     N K   IR+ KNLRVC DCH   K +SKI     V+RD+ RFH F 
Sbjct: 620 EKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFE 679

Query: 925 DGKCSCGDYW 934
           DG CSCGDYW
Sbjct: 680 DGCCSCGDYW 689



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 156/567 (27%), Positives = 260/567 (45%), Gaps = 85/567 (14%)

Query: 85  NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCAR 144
            R  L S+LR C   G S    G QVHC +LKS                GS L       
Sbjct: 5   QRQNLVSILRVCTRKGLS--DQGGQVHCYLLKS----------------GSGL------- 39

Query: 145 RIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA 204
                    +LI+ N +I +Y +  + +  +K+F  M                      +
Sbjct: 40  ---------NLITSNYLIDMYCKCREPLMAYKVFDSMPERN----------------VVS 74

Query: 205 YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS 264
           +S+++SG  L               DL    +L S   R G  Y     F   ++     
Sbjct: 75  WSALMSGHVLN-------------GDLKGSLSLFSEMGRQG-IYPNEFTFSTNLKAC--- 117

Query: 265 MNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
             GL+    KG ++HG+ ++ G   MV VGN LV+MY+KCG I+++  VFR ++ +  +S
Sbjct: 118 --GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLIS 175

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMS--SNFSLISTLSSCASLGWIMLGQQIHGE 382
           WN MI+G    G   +A+  F  M+   +      F+L S L +C+S G I  G+QIHG 
Sbjct: 176 WNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGF 235

Query: 383 GLKLGL--DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
            ++ G    S  +++ +L+ LY   GYL    K F  + E   +SW+S+I  +A     V
Sbjct: 236 LVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFV 295

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
            EA+  +  ++      +     +I+   + F++ + G Q+ A  +K     ET++ N++
Sbjct: 296 -EAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSV 354

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD 560
           +  Y KCG +D+ EK FA M + +D +SW  +I+GY  + L  K++ + + M++     D
Sbjct: 355 VDMYLKCGLVDEAEKCFAEM-QLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPD 413

Query: 561 HFTFATVLSACASVATLERGME-----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
              +  VLSAC+    ++ G E     +   G++  +E    +    VD+  + GR+  A
Sbjct: 414 EVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACV----VDLLGRAGRLKEA 469

Query: 616 SRFFDLMPVR-NVYSWNSMISGYARHG 641
               D MP++ NV  W +++S    HG
Sbjct: 470 KHLIDTMPIKPNVGIWQTLLSLCRVHG 496



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 214/470 (45%), Gaps = 56/470 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +LK G   ++   N LI++Y +  +   A K+FD MP+RN VSW+ ++SG+   G  
Sbjct: 29  HCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDL 88

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
             +  +F EM R G   N +   + L+AC     +  + G+Q+H   LK        V N
Sbjct: 89  KGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL--NALEKGLQIHGFCLKIGFEMMVEVGN 146

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY  C    + A ++F  I  R LISWN++I+ +   G        F  MQ    +
Sbjct: 147 SLVDMYSKCGRINE-AEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL--LSDLYVGSALVSGFARLG 245
              +P+E+T  SL+ A  S+ +   Y  +QI   + ++G    S   +  +LV  + + G
Sbjct: 206 E--RPDEFTLTSLLKACSSTGM--IYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCG 261

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGR--------------------------------- 272
             + ARK F+Q+ +K ++S + L+ G                                  
Sbjct: 262 YLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIG 321

Query: 273 --------RKGKEVHGYLIR--SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                   R+GK++    ++  SGL    +V N +V+MY KCG +D++   F  M  KD 
Sbjct: 322 VFADFALLRQGKQMQALAVKLPSGL--ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDV 379

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           +SW  +I+G  ++G  ++++  F  M R  +       ++ LS+C+  G I  G+++  +
Sbjct: 380 ISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSK 439

Query: 383 GLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVI 430
            L+  G+   V     ++ L   AG L     +   MP    V  W +++
Sbjct: 440 LLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 209/435 (48%), Gaps = 28/435 (6%)

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           +L+S L  C   G    G Q+H   LK G   ++  SN L+ +Y          KVF  M
Sbjct: 8   NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
           PE + VSW++++     +  L   ++  + +M R G  PN  TF   L A    +  + G
Sbjct: 68  PERNVVSWSALMSGHVLNGDLKG-SLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
            Q+H   +K        + N+L+  Y KCG +++ EK+F R+ + R  +SWN+MI+G++H
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVD-RSLISWNAMIAGFVH 185

Query: 539 NELLPKAMNLVWFMMQRG---QRLDHFTFATVLSACASVATLERGMEVHACGVRA---CL 592
                KA++  + MMQ     +R D FT  ++L AC+S   +  G ++H   VR+   C 
Sbjct: 186 AGYGSKALD-TFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCP 244

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
               + GS LVD+Y KCG +  A + FD +  + + SW+S+I GYA+ G   +A+ LF +
Sbjct: 245 SSATITGS-LVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKR 303

Query: 653 MKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP---QLEQFSCMVDLLG 709
           ++      D      ++   +   L+ +G    K M  +   +P   +    + +VD+  
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQG----KQMQALAVKLPSGLETSVLNSVVDMYL 359

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM-----EPQ 764
           + G +D+ E+   +M +  + + W  V+         K  LG+K+  + +EM     EP 
Sbjct: 360 KCGLVDEAEKCFAEMQLK-DVISWTVVI-----TGYGKHGLGKKSVRIFYEMLRHNIEPD 413

Query: 765 NAVNYVLLANMYASG 779
                 +L+    SG
Sbjct: 414 EVCYLAVLSACSHSG 428



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 139/292 (47%), Gaps = 21/292 (7%)

Query: 4   AKLFHLQILKHGF--AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
            K  H  +++ GF       +  +L+++YV+ G L SA K FD++ ++  +SW+ ++ GY
Sbjct: 229 GKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGY 288

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
             +G   EA  +FK +      ++ +AL S++    +      + G Q+  L +K     
Sbjct: 289 AQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFAL--LRQGKQMQALAVKLPSGL 346

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V N ++ MY  C    D A + F E++ +D+ISW  +I+ Y + G      ++F  M
Sbjct: 347 ETSVLNSVVDMYLKC-GLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM 405

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
                R++++P+E  + ++++A   S  +  G  L  ++L   +  G+   +   + +V 
Sbjct: 406 ----LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLL---ETHGIKPRVEHYACVVD 458

Query: 240 GFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRK------GKEVHGYLIR 284
              R G    A+ + + M I+ NV     L+   R       GKEV   L+R
Sbjct: 459 LLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLR 510


>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 640

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/611 (39%), Positives = 346/611 (56%), Gaps = 40/611 (6%)

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA--DAGYLSRCLKVF 415
           + ++  LSSC +L  +    QIH + +  G+ SD  V++ +LS  A    G +     +F
Sbjct: 36  YPILRHLSSCKTLKDL---TQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLF 92

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS-PNGVTFINILAAASSFSM 474
           + + + D    N++I A+A S   + +AV +Y +M  +    P+  TF  +L A S    
Sbjct: 93  YRIRKPDIFIANTLIRAYAFSPNPI-DAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPS 151

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE------------ 522
            +LG  +H+ V K   ++E ++ N L+  Y  CG ++    +F R  E            
Sbjct: 152 LRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGG 211

Query: 523 ------------------RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
                              RD VSW+ MI+GY+      + + L   MM      +    
Sbjct: 212 YLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVL 271

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
              LSACA +  +E+G  +     R  +   V +G+AL+DMYSKCG ++ A   F  M  
Sbjct: 272 VNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKE 331

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           +NV +W++MI+G A +G G  AL LFSQM++ G  P+ VTF+G+L+ACSH+ LVDEG   
Sbjct: 332 KNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSF 391

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           F SM+ +YGL P      CMVDL GRAG LD+ +  I  MP  PNS IW  +L A CR +
Sbjct: 392 FHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNA-CRIH 450

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
              TELG +    L E++P +   YVLL+N+YA+ G+W+ VA+ R+ M+E +V K  GCS
Sbjct: 451 -GDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCS 509

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLV 864
           ++ + D +H FVAGD SHP+ ++IY KL E++Q+++ AGY P T   L D++ E KE  +
Sbjct: 510 FIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETAL 569

Query: 865 SYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
            +HSEK+A+AF L +      IRI KNLRVC DCHSA K ISKI  REI++RD  RFHHF
Sbjct: 570 CHHSEKLAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHF 629

Query: 924 NDGKCSCGDYW 934
            DG CSC D+W
Sbjct: 630 RDGSCSCMDFW 640



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 176/402 (43%), Gaps = 40/402 (9%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYA--KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           ++H   I +G+F    V + +++  A    G+I  +R +F  +   D    NT+I     
Sbjct: 53  QIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAF 112

Query: 335 NGCYEEAIMNFCAMRRDGLMSSN---FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
           +    +A++ +  M    ++  +   F L+  L +C+ +  + LG+ IH    KLG  S+
Sbjct: 113 SPNPIDAVVFYSEMTESSVVFPDVHTFPLL--LKACSEIPSLRLGEAIHSHVFKLGWSSE 170

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD---------------- 435
           VSVSN L+ +YA  G +     VF   PE D  SWN +IG +                  
Sbjct: 171 VSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPD 230

Query: 436 --------------SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
                          E+   E +  + DM      PN    +N L+A +     + G  +
Sbjct: 231 RDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWI 290

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
              + + NV     +  AL+  Y KCG ++   ++F +M E ++ ++W++MI+G   N  
Sbjct: 291 ERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKE-KNVLAWSAMINGLAINGQ 349

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-VHACGVRACLEFDVVIGS 600
              A+NL   M  +G + +  TF  +L+AC+    ++ G    H+      L+ +     
Sbjct: 350 GKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHC 409

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHG 641
            +VD+Y + G +D A      MP + N   W ++++    HG
Sbjct: 410 CMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHG 451



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 150/350 (42%), Gaps = 44/350 (12%)

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN-----------GLMEGRRKGKE 277
            D+++ + L+  +A   N   A   + +M + +VV  +             +   R G+ 
Sbjct: 98  PDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEA 157

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTID----------------------------- 308
           +H ++ + G    V+V N LV MYA CG I+                             
Sbjct: 158 IHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGV 217

Query: 309 --DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
              +R +F  M  +D VSW+ MI+G  Q   ++E +  F  M  + +  +   L++ LS+
Sbjct: 218 FKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSA 277

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSW 426
           CA LG +  GQ I     +  +   V +  AL+ +Y+  G + R L+VF  M E + ++W
Sbjct: 278 CAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAW 337

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ-VHAQV 485
           +++I   A +     +A+  +  M   G  PN VTFI IL A S   +   G    H+  
Sbjct: 338 SAMINGLAIN-GQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMT 396

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             Y +         ++  YG+ G +D  + +   M  + +   W ++++ 
Sbjct: 397 SIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNA 446



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 136/302 (45%), Gaps = 18/302 (5%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N +I  Y++ G   SA ++F+ MPDR+ VSW+ +++GY  +    E   +F++M+     
Sbjct: 206 NIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIE 265

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
            N   L + L AC   G    + G  +   + + N      +   LI MY  C  S + A
Sbjct: 266 PNESVLVNALSACAHLG--AMEQGQWIERYMERKNVRLTVRLGTALIDMYSKC-GSVERA 322

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
             +F +++ +++++W+++I+  +  G       LFS+M+ +G    +KPNE TF  ++ A
Sbjct: 323 LEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQG----VKPNEVTFIGILNA 378

Query: 204 AYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
              S L   G        +M    GL  + +    +V  + R G    A+ + + M  K 
Sbjct: 379 CSHSKLVDEGCSFFH---SMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKP 435

Query: 262 VVSMNG--LMEGRRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFR 315
             ++ G  L   R  G    G  +   L ++     G    L N+YA CG  D    + R
Sbjct: 436 NSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRR 495

Query: 316 FM 317
            M
Sbjct: 496 MM 497



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 199/477 (41%), Gaps = 75/477 (15%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRV--GDLASASKLFDEMPDRNSVSWACIVS 59
           KD    H Q +  G   D F+ + +++       G +  A  LF  +   +      ++ 
Sbjct: 49  KDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLIR 108

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLL-NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
            Y       +A   + EM  +  +  + +    +L+AC E  PS  + G  +H  V K  
Sbjct: 109 AYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEI-PS-LRLGEAIHSHVFKLG 166

Query: 119 QTFDGLVSNVLIAMYGSC--LES--------TDC--------------------ARRIFE 148
            + +  VSN L+ MY SC  +ES         +C                    ARR+FE
Sbjct: 167 WSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFE 226

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
            +  RD++SW+ +I+ Y Q         LF  M  E     ++PNE    + ++A   + 
Sbjct: 227 AMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGE----KIEPNESVLVNALSAC--AH 280

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
           L      Q I   +++  +   + +G+AL+  +++ G+   A ++F +M +KNV++ + +
Sbjct: 281 LGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAM 340

Query: 269 MEG---RRKGKE---VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
           + G     +GK+   +   +   G+        G++N  +    +D+  S F  M     
Sbjct: 341 INGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSM----- 395

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST-------------LSSCAS 369
               T I GL  N  +   +++     R G++    ++I +             L++C  
Sbjct: 396 ----TSIYGLKPNAHHHCCMVDLYG--RAGMLDQAQTVIKSMPFKPNSAIWGALLNACRI 449

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLKVFFLMPEHDQVS 425
            G   LG+Q+ G+ L L LD +      LLS +YA  G   R  ++  +M E  QVS
Sbjct: 450 HGDTELGEQV-GKRL-LELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRER-QVS 503


>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
          Length = 624

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 221/574 (38%), Positives = 355/574 (61%), Gaps = 6/574 (1%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S +++CA    +   ++IH          D  + N+L+ +Y     +     VF  M   
Sbjct: 56  SFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRK 115

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D VSW S+I  +A ++  V EA+     M +  + PNG TF ++L AA +++    G Q+
Sbjct: 116 DMVSWTSLIAGYAQNDMPV-EAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQI 174

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           HA  +K     +  + +ALL  Y +CG+MD    +F ++ + ++ VSWN++ISG+     
Sbjct: 175 HALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKL-DSKNGVSWNALISGFARKGD 233

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
              A+     M++ G    HFT+++V S+ A +  LE+G  VHA  +++  +    +G+ 
Sbjct: 234 GESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNT 293

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+DMY+K G +  A + FD +  +++ +WNSM++ +A++G G +A++ F +M+  G   +
Sbjct: 294 LLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLN 353

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            +TF+ +L+ACSH GLV EG ++F+ M + Y L P+++ +  +V LLGRAG L+    FI
Sbjct: 354 QITFLCILTACSHGGLVKEGKRYFEMMKE-YDLEPEIDHYVTVVALLGRAGLLNYALVFI 412

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
            KMP+ P + +W  +L AC R + +  ++G+ AA+ +FE++P ++   VLL N+YAS G+
Sbjct: 413 FKMPMEPTAAVWGALLAAC-RMH-KNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQ 470

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           W+  A+ R  MK   VKKE  CSWV M++ VH+FVA D++HP+ + IY+   E+++K+R 
Sbjct: 471 WDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRK 530

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR-NSKLPIRIMKNLRVCGDCHSA 900
            GYVP   + L  ++ + KE  + YHSEK+A+AF L    +   IRIMKN+R+CGDCHSA
Sbjct: 531 EGYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSA 590

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           FK+ISK+ GREIV+RD+NRFHHF+ G CSCGDYW
Sbjct: 591 FKYISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 179/370 (48%), Gaps = 9/370 (2%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            +++H +L  S       + N L++MY KC ++ D+R+VF  M  KD VSW ++I+G  Q
Sbjct: 70  ARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQ 129

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N    EAI     M +     + F+  S L +  +      G+QIH   +K G   DV V
Sbjct: 130 NDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYV 189

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA---DSEALVSEAVKYYLDMR 451
            +ALL +YA  G +     VF  +   + VSWN++I  FA   D E+    A+  + +M 
Sbjct: 190 GSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGES----ALMTFAEML 245

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
           R G+     T+ ++ ++ +     + G  VHA VIK        + N LL  Y K G M 
Sbjct: 246 RNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMI 305

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
           D  K+F R+ + +D V+WNSM++ +    L  +A++    M + G  L+  TF  +L+AC
Sbjct: 306 DARKVFDRV-DNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTAC 364

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-W 630
           +    ++ G           LE ++     +V +  + G ++YA  F   MP+    + W
Sbjct: 365 SHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVW 424

Query: 631 NSMISGYARH 640
            ++++    H
Sbjct: 425 GALLAACRMH 434



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 182/384 (47%), Gaps = 51/384 (13%)

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           S + AC +      +   ++H  +  S    D  + N LI MY  C    D AR +F+++
Sbjct: 56  SFITACAQS--KNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLD-ARNVFDQM 112

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLS 210
             +D++SW S+I+ Y+Q    +    L   M +  F    KPN +TF SL+ AA +   S
Sbjct: 113 RRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRF----KPNGFTFASLLKAAGAYADS 168

Query: 211 GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
           G+   +QI A+  K G   D+YVGSAL+  +AR G    A  +F+++  KN VS N L+ 
Sbjct: 169 GTG--RQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226

Query: 271 G-----------------------------------------RRKGKEVHGYLIRSGLFD 289
           G                                           +GK VH ++I+S    
Sbjct: 227 GFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKL 286

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
              VGN L++MYAK G++ D+R VF  +  KD V+WN+M++   Q G  +EA+ +F  MR
Sbjct: 287 TAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMR 346

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
           + G+  +  + +  L++C+  G +  G++      +  L+ ++     +++L   AG L+
Sbjct: 347 KSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGLLN 406

Query: 410 RCLKVFFLMP-EHDQVSWNSVIGA 432
             L   F MP E     W +++ A
Sbjct: 407 YALVFIFKMPMEPTAAVWGALLAA 430



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 191/362 (52%), Gaps = 21/362 (5%)

Query: 448 LDMRRAG-WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
           LD+  AG  +P    + + + A +     +   ++HA +     A +  ++N+L+  Y K
Sbjct: 39  LDLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCK 98

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
           C  + D   +F +M  R+D VSW S+I+GY  N++  +A+ L+  M++   + + FTFA+
Sbjct: 99  CRSVLDARNVFDQM-RRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFAS 157

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           +L A  + A    G ++HA  V+     DV +GSAL+DMY++CG++D A+  FD +  +N
Sbjct: 158 LLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKN 217

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG-FKH- 684
             SWN++ISG+AR G G+ AL  F++M  +G    H T+  V S+ +  G +++G + H 
Sbjct: 218 GVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHA 277

Query: 685 --FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
              KS  ++   +      + ++D+  ++G +    +  +++    + + W ++L A  +
Sbjct: 278 HVIKSRQKLTAFVG-----NTLLDMYAKSGSMIDARKVFDRVD-NKDLVTWNSMLTAFAQ 331

Query: 743 ANCRKTELGRKAANMLFEMEPQ----NAVNYVLLANMYASGGKWEDVAKARKAMKEAEVK 798
                  LG++A +   EM       N + ++ +    + GG  ++  +  + MKE +++
Sbjct: 332 YG-----LGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLE 386

Query: 799 KE 800
            E
Sbjct: 387 PE 388



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 150/329 (45%), Gaps = 16/329 (4%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S   +  H   +K G+  DV++ + L+++Y R G +  A+ +FD++  +N VSW  ++SG
Sbjct: 168 SGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISG 227

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           +  KG    A   F EM+R GF    +   SV  +    G    + G  VH  V+KS Q 
Sbjct: 228 FARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLG--ALEQGKWVHAHVIKSRQK 285

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
               V N L+ MY       D AR++F+ ++ +DL++WNS+++ ++Q G        F  
Sbjct: 286 LTAFVGNTLLDMYAKSGSMID-ARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEE 344

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M++ G       N+ TF  ++TA     L      ++   M+K+  L  ++     +V+ 
Sbjct: 345 MRKSGVYL----NQITFLCILTACSHGGLVKEG--KRYFEMMKEYDLEPEIDHYVTVVAL 398

Query: 241 FARLGNFYYARK-IFEQMIQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG-- 296
             R G   YA   IF+  ++        L+   R  K    G      +F++    +G  
Sbjct: 399 LGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPP 458

Query: 297 --LVNMYAKCGTIDDSRSVFRFMIGKDSV 323
             L N+YA  G  D +  V R M+    V
Sbjct: 459 VLLYNIYASTGQWDAAARV-RMMMKTTGV 486


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 247/663 (37%), Positives = 374/663 (56%), Gaps = 46/663 (6%)

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           + SVF  +   + + WNTMI G   +     ++  +  M   GL+ ++++    L SCA 
Sbjct: 17  ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD------------------------- 404
                 GQQIHG+ LKLG D D+ V  +L+S+Y                           
Sbjct: 77  SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136

Query: 405 -AGYLSR-----CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
             GY SR       K+F  +P  D VSWN++I  +A++     EA++ + +M +    P+
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAET-GCYKEALELFEEMMKMNVRPD 195

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
             T++ +L+A +     +LG QVH+ V  +   +   I NAL+  Y KCGE++    +F 
Sbjct: 196 ESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQ 255

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
            +S  +D +SWN++I GY H  L  +A+ L   M++ G+  +  T  +VL ACA +  ++
Sbjct: 256 GLS-YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAID 314

Query: 579 RGMEVHAC------GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
            G  +H        GV         + ++L+DMY+KCG I+ A + F+ M  +++ SWN+
Sbjct: 315 IGRWIHVYIDKRLKGVTNASS----LRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNA 370

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           MI G+A HG  D +  LFS+M+  G  PD +TFVG+LSACSH+G++D G   F+SM+Q Y
Sbjct: 371 MIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDY 430

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
            + P+LE + CM+DLLG +G   + EE IN M + P+ +IW ++L AC        EL  
Sbjct: 431 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG--NVELAE 488

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
             A  L ++EP+N  +Y+LL+N+YAS G+WEDVA+ R  +    +KK  GCS + +   V
Sbjct: 489 SFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVV 548

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
             FV GD+ HP+   IY  L+E+   + +AG+VP T   L ++E E KE  + +HSEK+A
Sbjct: 549 FEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 608

Query: 873 VAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
           +AF +++      + I+KNLRVC +CH A K +SKI  REIV RD  RFHHF DG CSC 
Sbjct: 609 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVCSCN 668

Query: 932 DYW 934
           DYW
Sbjct: 669 DYW 671



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 215/444 (48%), Gaps = 41/444 (9%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI- 201
           A  +FE I+  + + WN++I  ++   D +S   L+  M   G    L PN YTF  L+ 
Sbjct: 17  ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLG----LLPNSYTFPFLLK 72

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
           + A S   +     QQI   V K G   DLYV ++L+S + +      A K+F++   ++
Sbjct: 73  SCAKSKTFTEG---QQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRD 129

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
           VVS   L+ G                             YA  G I  ++ +F  +  KD
Sbjct: 130 VVSYTALITG-----------------------------YASRGDIRSAQKLFDEIPVKD 160

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            VSWN MISG  + GCY+EA+  F  M +  +     + ++ LS+CA  G I LG+Q+H 
Sbjct: 161 VVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHS 220

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
                G DS++ + NAL+ LY+  G +     +F  +   D +SWN++IG +     L  
Sbjct: 221 WVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMN-LYK 279

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY--NVANETTIENA 499
           EA+  + +M R+G +PN VT +++L A +      +G  +H  + K    V N +++  +
Sbjct: 280 EALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 339

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  Y KCG+++   ++F  M  +    SWN+MI G+  +     + +L   M + G   
Sbjct: 340 LIDMYAKCGDIEAAHQVFNSMLHKSLS-SWNAMIFGFAMHGRADASFDLFSRMRKIGIEP 398

Query: 560 DHFTFATVLSACASVATLERGMEV 583
           D  TF  +LSAC+    L+ G  +
Sbjct: 399 DDITFVGLLSACSHSGMLDLGRHI 422



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 182/418 (43%), Gaps = 83/418 (19%)

Query: 36  LASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRA 95
           L  A+ +F+ + + N + W  ++ G+        +  ++  MV  G L N Y    +L++
Sbjct: 14  LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC------------- 142
           C +     F  G Q+H  VLK     D  V   LI+MY       D              
Sbjct: 74  CAK--SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVV 131

Query: 143 -----------------ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
                            A+++F+EI  +D++SWN++IS Y++ G      +LF  M    
Sbjct: 132 SYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEM---- 187

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLL-QQILAMVKKAGLLSDLYVGSALVSGFARL 244
            + +++P+E T+ ++++A      SGS  L +Q+ + V   G  S+L + +AL+  +++ 
Sbjct: 188 MKMNVRPDESTYVTVLSACAH---SGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKC 244

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------ 274
           G    A  +F+ +  K+V+S N L+ G                                 
Sbjct: 245 GEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVL 304

Query: 275 -----------GKEVHGYLIR--SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                      G+ +H Y+ +   G+ +  ++   L++MYAKCG I+ +  VF  M+ K 
Sbjct: 305 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKS 364

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
             SWN MI G   +G  + +   F  MR+ G+   + + +  LS+C+  G + LG+ I
Sbjct: 365 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHI 422



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 206/453 (45%), Gaps = 67/453 (14%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVR------------------------------ 32
           + +  H Q+LK GF  D+++  +LI++YV+                              
Sbjct: 82  EGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYA 141

Query: 33  -VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGS 91
             GD+ SA KLFDE+P ++ VSW  ++SGY   G   EA ++F+EM++     +     +
Sbjct: 142 SRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVT 201

Query: 92  VLRACQECGPSGFKFGMQVHCLVLKSNQTFDG--LVSNVLIAMYGSCLESTDCARRIFEE 149
           VL AC   G    + G QVH  V   +  FD    + N LI +Y  C E  + A  +F+ 
Sbjct: 202 VLSACAHSG--SIELGRQVHSWV--DDHGFDSNLKIVNALIDLYSKCGE-VETACGLFQG 256

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA--YSS 207
           +  +D+ISWN++I  Y+          LF  M R G      PN+ T  S++ A     +
Sbjct: 257 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG----ETPNDVTMLSVLPACAHLGA 312

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
           +  G ++   I   +K  G+ +   + ++L+  +A+ G+   A ++F  M+ K++ S N 
Sbjct: 313 IDIGRWIHVYIDKRLK--GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNA 370

Query: 268 L-----MEGRRKGK-EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
           +     M GR     ++   + + G+        GL++  +  G +D  R +FR M    
Sbjct: 371 MIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDY 430

Query: 322 SVS-----WNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
            ++     +  MI  L  +G ++EA  ++N   M  DG++       S L +C   G + 
Sbjct: 431 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVI-----WCSLLKACKMHGNVE 485

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLS-LYADAG 406
           L +      +K  ++ +   S  LLS +YA AG
Sbjct: 486 LAESFAQNLIK--IEPENPSSYILLSNIYASAG 516



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 47/234 (20%)

Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
           + YA+  F+ +   N   WN+MI G+A       +LTL+  M   G LP+  TF  +L +
Sbjct: 14  LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73

Query: 672 CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
           C+ +    EG        Q++G   Q+ +    +DL            +++   I+    
Sbjct: 74  CAKSKTFTEG-------QQIHG---QVLKLGFDLDL------------YVHTSLISMYVQ 111

Query: 732 IWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKA 791
            WR                   A  +      ++ V+Y  L   YAS G   D+  A+K 
Sbjct: 112 NWRL----------------EDAYKVFDRSSHRDVVSYTALITGYASRG---DIRSAQKL 152

Query: 792 MKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
             E  VK     SW  M  G     A    + E   ++E++ ++N +  ++ YV
Sbjct: 153 FDEIPVKDVV--SWNAMISG----YAETGCYKEALELFEEMMKMNVRPDESTYV 200


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 242/700 (34%), Positives = 387/700 (55%), Gaps = 43/700 (6%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYA--KCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
           R+ K+ HG++IR+G F      + L  M A     +++ +R VF  +   +S +WNT+I 
Sbjct: 44  RQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIR 103

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
                     +I  F  M  +     N ++    + + A +  + LGQ +HG  +K  + 
Sbjct: 104 AYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVG 163

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           SDV V+N+L+  Y   G L    KVF  + E D VSWNS+I  F   +    +A++ +  
Sbjct: 164 SDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ-KGSPDKALELFKK 222

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M       + VT + +L+A +     + G QV + + +  V    T+ NA+L  Y KCG 
Sbjct: 223 MESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS 282

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNE----------LLPKAMNLVW--------- 550
           ++D +++F  M E +D V+W +M+ GY  +E           +P+   + W         
Sbjct: 283 IEDAKRLFDAM-EEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQ 341

Query: 551 -------------FMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
                          +Q+  +L+  T  + LSACA V  LE G  +H+   +  +  +  
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH 401

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           + SAL+ MYSKCG ++ +   F+ +  R+V+ W++MI G A HG G++A+ +F +M+   
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 461

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
             P+ VTF  V  ACSH GLVDE    F  M   YG++P+ + ++C+VD+LGR+G L+K 
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA 521

Query: 718 EEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMY 776
            +FI  MPI P++ +W  +LGAC   AN    E+   A   L E+EP+N   +VLL+N+Y
Sbjct: 522 VKFIEAMPIPPSTSVWGALLGACKIHANLNLAEM---ACTRLLELEPRNDGAHVLLSNIY 578

Query: 777 ASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELN 836
           A  GKWE+V++ RK M+   +KKE GCS + +   +H F++GD +HP  + +Y KL E+ 
Sbjct: 579 AKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVM 638

Query: 837 QKMRDAGYVPQTKFALFDLEPES-KEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVC 894
           +K++  GY P+    L  +E E  KE  ++ HSEK+A+ + +++  +   IR++KNLRVC
Sbjct: 639 EKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVC 698

Query: 895 GDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           GDCHS  K IS++  REI++RD  RFHHF +G+CSC D+W
Sbjct: 699 GDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 241/515 (46%), Gaps = 49/515 (9%)

Query: 34  GDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV-RAGFLLNRYALGSV 92
             L  A K+FDE+P  NS +W  ++  Y        +   F +MV  +    N+Y    +
Sbjct: 78  ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137

Query: 93  LRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIET 152
           ++A  E   S    G  +H + +KS    D  V+N LI  Y SC +  D A ++F  I+ 
Sbjct: 138 IKAAAEV--SSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD-LDSACKVFTTIKE 194

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGS 212
           +D++SWNS+I+ + Q+G      +LF +M+ E     +K +  T   +++A   + +   
Sbjct: 195 KDVVSWNSMINGFVQKGSPDKALELFKKMESE----DVKASHVTMVGVLSAC--AKIRNL 248

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR 272
              +Q+ + +++  +  +L + +A++  + + G+   A+++F+ M +K+ V+   +++G 
Sbjct: 249 EFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG- 307

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
                                       YA     + +R V   M  KD V+WN +IS  
Sbjct: 308 ----------------------------YAISEDYEAAREVLNSMPQKDIVAWNALISAY 339

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
           +QNG   EA++ F  ++    M  N  +L+STLS+CA +G + LG+ IH    K G+  +
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMN 399

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
             V++AL+ +Y+  G L +  +VF  + + D   W+++IG  A      +EAV  +  M+
Sbjct: 400 FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA-MHGCGNEAVDMFYKMQ 458

Query: 452 RAGWSPNGVTFINILAAASSFSM----GKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
            A   PNGVTF N+  A S   +      L HQ+ +    Y +  E      ++   G+ 
Sbjct: 459 EANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN---YGIVPEEKHYACIVDVLGRS 515

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
           G ++   K    M        W +++    IH  L
Sbjct: 516 GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANL 550



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 87/383 (22%), Positives = 174/383 (45%), Gaps = 48/383 (12%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K     DVF+ N+LI+ Y   GDL SA K+F  + +++ VSW  +++G+  KG 
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            ++A ++FK+M       +   +  VL AC +      +FG QV   + ++    +  ++
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKI--RNLEFGRQVCSYIEENRVNVNLTLA 270

Query: 127 NVLIAMYGSC------------------------------LESTDCARRIFEEIETRDLI 156
           N ++ MY  C                               E  + AR +   +  +D++
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 330

Query: 157 SWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ 216
           +WN++IS Y Q G       +F  +Q    + ++K N+ T  S ++A   + +    L +
Sbjct: 331 AWNALISAYEQNGKPNEALIVFHELQ---LQKNMKLNQITLVSTLSAC--AQVGALELGR 385

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-- 274
            I + +KK G+  + +V SAL+  +++ G+   +R++F  + +++V   + ++ G     
Sbjct: 386 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG 445

Query: 275 -GKEVHGYLIRSGLFDMVAVGNGLVNMYAKC---GTIDDSRSVFRFM-----IGKDSVSW 325
            G E      +    ++   G    N++  C   G +D++ S+F  M     I  +   +
Sbjct: 446 CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHY 505

Query: 326 NTMISGLDQNGCYEEAIMNFCAM 348
             ++  L ++G  E+A+    AM
Sbjct: 506 ACIVDVLGRSGYLEKAVKFIEAM 528


>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
 gi|219885099|gb|ACL52924.1| unknown [Zea mays]
          Length = 530

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/535 (40%), Positives = 334/535 (62%), Gaps = 6/535 (1%)

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +Y   G +S    VF  MP  D VSW  +I  +A +  + +EA+    DM RA + PNG 
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNY-MPAEAIGLLPDMLRARFRPNGF 59

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           TF ++L A  +     +G Q+HA  +KYN   +  + +ALL  Y +C +MD    +F R+
Sbjct: 60  TFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL 119

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
             + +EVSWN++I+G+         +     M + G    HFT++++ SA A +  LE+G
Sbjct: 120 VSK-NEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQG 178

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
             VHA  +++  +    +G+ ++ MY+K G +  A + FD M  R++ +WN+M++  A++
Sbjct: 179 RWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQY 238

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
           G G +A+  F +++  G   + +TF+ VL+ACSH GLV EG KH+  M + Y + P+++ 
Sbjct: 239 GLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEG-KHYFDMMKDYNVQPEIDH 297

Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
           +   VDLLGRAG L +   F+ KMP+ P + +W  +LGAC R + +  ++G+ AA+ +FE
Sbjct: 298 YVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGAC-RMH-KNAKMGQYAADHVFE 355

Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           ++P +    VLL N+YAS GKW D A+ RK MK   VKKE  CSWV +++ VH+FVA D+
Sbjct: 356 LDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDD 415

Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR- 879
           +HP+   IY   +E+N +++ AGYVP T   L  +  + +E  + YHSEKIA+AF L   
Sbjct: 416 THPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINM 475

Query: 880 NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            +   IRIMKN+R+CGDCHSAFK++SK+  REIV+RD+NRFHHF++G CSCGDYW
Sbjct: 476 PAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 166/342 (48%), Gaps = 3/342 (0%)

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
           MY KCG + D+R VF  M  +D VSW  +I+G  QN    EAI     M R     + F+
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
             S L +  + G   +G+Q+H   +K   D DV V +ALL +YA    +   + VF  + 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             ++VSWN++I  FA      +  +K + +M+R G+     T+ ++ +A +     + G 
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMK-FAEMQRNGFGATHFTYSSMFSAFARIGALEQGR 179

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
            VHA +IK        + N +L  Y K G M D  K+F RM ++RD V+WN+M++     
Sbjct: 180 WVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRM-DKRDLVTWNTMLTALAQY 238

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
            L  +A+     + + G +L+  TF +VL+AC+    ++ G           ++ ++   
Sbjct: 239 GLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHY 298

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYARH 640
            + VD+  + G +  A  F   MP+    + W +++     H
Sbjct: 299 VSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 340



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 161/343 (46%), Gaps = 49/343 (14%)

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY  C   +D AR +F+++ +RD++SW  +I+ Y+Q         L   M R  FR    
Sbjct: 1   MYCKCGAVSD-ARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFR---- 55

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           PN +TF SL+ A  +    G  + +Q+ A+  K     D+YVGSAL+  +AR      A 
Sbjct: 56  PNGFTFTSLLKA--TGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAI 113

Query: 252 KIFEQMIQKNVVSMNGLMEG---------------------------------------- 271
            +F++++ KN VS N L+ G                                        
Sbjct: 114 MVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIG 173

Query: 272 -RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
              +G+ VH +LI+SG      VGN ++ MYAK G++ D+R VF  M  +D V+WNTM++
Sbjct: 174 ALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLT 233

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
            L Q G  +EA+ +F  +R+ G+  +  + +S L++C+  G +  G+          +  
Sbjct: 234 ALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQP 293

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           ++    + + L   AG L   L   F MP E     W +++GA
Sbjct: 294 EIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGA 336



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 7/196 (3%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   +K+ +  DV++ + L+++Y R   +  A  +FD +  +N VSW  +++G+  K   
Sbjct: 81  HALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADG 140

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
                 F EM R GF    +   S+  A    G    + G  VH  ++KS Q     V N
Sbjct: 141 ETTLMKFAEMQRNGFGATHFTYSSMFSAFARIG--ALEQGRWVHAHLIKSGQKLTAFVGN 198

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            ++ MY       D AR++F+ ++ RDL++WN++++  +Q G        F  +++ G  
Sbjct: 199 TMLGMYAKSGSMVD-ARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCG-- 255

Query: 188 YSLKPNEYTFGSLITA 203
             ++ N+ TF S++TA
Sbjct: 256 --IQLNQITFLSVLTA 269



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 51/99 (51%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H  ++K G     F+ NT++ +Y + G +  A K+FD M  R+ V+W  +++  
Sbjct: 176 EQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTAL 235

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G+  EA   F+E+ + G  LN+    SVL AC   G
Sbjct: 236 AQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGG 274


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 250/720 (34%), Positives = 391/720 (54%), Gaps = 22/720 (3%)

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKN----------VVSMNGLMEGRRKGKEV 278
            D ++ + ++ GFA  G    A   +  M++            VV     + G  +G+  
Sbjct: 70  PDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAA 129

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           HG +I+ GL   V   N LV  YAK G ++D+  VF  M  +D V+WNTM+ G   NG  
Sbjct: 130 HGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLG 189

Query: 339 EEAIMNFCAMRRDGL--MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
             A+  F  M  D L     +  +I+ L++C      M G++IHG  ++ GL+ D+ V  
Sbjct: 190 SLALACFQEMH-DALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGT 248

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           +LL +Y   G ++    VF  MP    V+WN +IG +A +E    EA   ++ MR  G  
Sbjct: 249 SLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNER-PDEAFDCFMQMRAEGLQ 307

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
              VT IN+LAA +       G  VH  V++        +E ALL  YGK G+++  EKI
Sbjct: 308 VEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKI 367

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F +++ +   VSWN+MI+ Y++ E+  +A+ L   ++ +    D+FT +TV+ A   + +
Sbjct: 368 FGKIANK-TLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGS 426

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           L    ++H+  +      + +I +A++ MY++ G +  +   FD M  ++V SWN+MI G
Sbjct: 427 LRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMG 486

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           YA HG G  AL +F +MK +G  P+  TFV VL+ACS +GLVDEG+ HF  M Q YG+IP
Sbjct: 487 YAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIP 546

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAAN 756
           Q+E + CM DLLGR G+L ++ +FI  MPI P S +W ++L A    N    ++   AA 
Sbjct: 547 QIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQN--DIDIAEYAAE 604

Query: 757 MLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV 816
            +F++E  N   Y++L++MYA  G+WEDV + R  MKE  +++    S V +      F 
Sbjct: 605 RIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFA 664

Query: 817 AGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESK-EDLVSYHSEKIAVAF 875
            GD SH +   I+E    L++K+ +      T+   + +   ++   + + HS ++AV F
Sbjct: 665 NGDMSHSQSRTIHEVSNILSRKIEETD---DTRNQSYPVPVATRTTTMPNKHSVRLAVVF 721

Query: 876 -VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            +++     PI + KN+R+C  CH A K IS+  GR IV+ DS  +H F+DG C CGDYW
Sbjct: 722 GLISSEIGSPILVKKNVRICNHCHHALKLISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781



 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 215/446 (48%), Gaps = 13/446 (2%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           LV   A  G +D++      + G D+   N MI G    G    A+  +  M  DG    
Sbjct: 47  LVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPD 106

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
            F+    +  CA LG +  G+  HG  +KLGL+ DV   N+L++ YA  G +    +VF 
Sbjct: 107 RFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFD 166

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA-GWSPNGVTFINILAAASSFSMG 475
            MP  D V+WN+++  +  S  L S A+  + +M  A     + V  I  LAA       
Sbjct: 167 GMPVRDIVTWNTMVDGYV-SNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSS 225

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             G ++H  VI++ +  +  +  +LL  Y KCGE+     +FA M   R  V+WN MI G
Sbjct: 226 MQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMP-LRTVVTWNCMIGG 284

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
           Y  NE   +A +    M   G +++  T   +L+ACA   +   G  VH   VR      
Sbjct: 285 YALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPH 344

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
           VV+ +AL++MY K G+++ + + F  +  + + SWN+MI+ Y       +A+TLF ++ L
Sbjct: 345 VVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLEL-L 403

Query: 656 DGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSM-SQVYGL--IPQLEQFSCMVDLLGRA 711
           + PL PD+ T   V+ A    G      +H + + S + GL         + ++ +  R+
Sbjct: 404 NQPLYPDYFTMSTVVPAFVLLG----SLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARS 459

Query: 712 GELDKIEEFINKMPITPNSLIWRTVL 737
           G++    E  +KM ++ + + W T++
Sbjct: 460 GDVVASREIFDKM-VSKDVISWNTMI 484



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 194/455 (42%), Gaps = 50/455 (10%)

Query: 57  IVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLK 116
           ++ G+   G+   A   ++ M+  G   +R+    V++ C   G  G   G   H +V+K
Sbjct: 78  MIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLG--GLDEGRAAHGMVIK 135

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
                D    N L+A Y   L   + A R+F+ +  RD+++WN+++  Y   G       
Sbjct: 136 LGLEHDVYTCNSLVAFYAK-LGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALA 194

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
            F  M       +L+    + G +   A   +   S   ++I   V + GL  D+ VG++
Sbjct: 195 CFQEMHD-----ALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTS 249

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM--------------------------- 269
           L+  + + G   YAR +F  M  + VV+ N ++                           
Sbjct: 250 LLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVE 309

Query: 270 --------------EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                         E    G+ VHGY++R      V +   L+ MY K G ++ S  +F 
Sbjct: 310 VVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFG 369

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            +  K  VSWN MI+       Y EAI  F  +    L    F++ + + +   LG +  
Sbjct: 370 KIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRH 429

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
            +QIH   + LG   +  + NA+L +YA +G +    ++F  M   D +SWN++I  +A 
Sbjct: 430 CRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYA- 488

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
                  A++ + +M+  G  PN  TF+++L A S
Sbjct: 489 IHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACS 523



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 208/479 (43%), Gaps = 63/479 (13%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H  ++K G  +DV+ CN+L+  Y ++G +  A ++FD MP R+ V+W  +V GY 
Sbjct: 125 EGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYV 184

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALG--SVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
             G+ + A   F+EM  A   +   ++G  + L AC  C       G ++H  V++    
Sbjct: 185 SNGLGSLALACFQEMHDA-LEVQHDSVGIIAALAAC--CLEVSSMQGKEIHGYVIRHGLE 241

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D  V   L+ MY  C E    AR +F  +  R +++WN +I  Y+        F  F +
Sbjct: 242 QDIKVGTSLLDMYCKCGE-VAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQ 300

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M+ EG +  +     T  +L+ A   +    S   + +   V +   L  + + +AL+  
Sbjct: 301 MRAEGLQVEV----VTAINLLAACAQT--ESSLYGRSVHGYVVRRQFLPHVVLETALLEM 354

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNG--------------------------------- 267
           + ++G    + KIF ++  K +VS N                                  
Sbjct: 355 YGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTM 414

Query: 268 --------LMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                   L+   R  +++H Y+I  G  +   + N +++MYA+ G +  SR +F  M+ 
Sbjct: 415 STVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVS 474

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA-----SLGWIM 374
           KD +SWNTMI G   +G  + A+  F  M+ +GL  +  + +S L++C+       GW+ 
Sbjct: 475 KDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMH 534

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
               +     + G+   +     +  L    G L   L+    MP +     W S++ A
Sbjct: 535 FNLMLQ----EYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTA 589



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 137/272 (50%), Gaps = 11/272 (4%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S   K  H  +++HG   D+ +  +L+++Y + G++A A  +F  MP R  V+W C++ G
Sbjct: 225 SMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGG 284

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y      +EA   F +M   G  +      ++L AC +   S   +G  VH  V++    
Sbjct: 285 YALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESS--LYGRSVHGYVVRRQFL 342

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
              ++   L+ MYG  +   + + +IF +I  + L+SWN++I+ Y  +        LF  
Sbjct: 343 PHVVLETALLEMYGK-VGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLE 401

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL-LQQILAMVKKAGLLSDLYVGSALVS 239
           +  +     L P+ +T  +++ A    VL GS    +QI + +   G   +  + +A++ 
Sbjct: 402 LLNQ----PLYPDYFTMSTVVPAF---VLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLH 454

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
            +AR G+   +R+IF++M+ K+V+S N ++ G
Sbjct: 455 MYARSGDVVASREIFDKMVSKDVISWNTMIMG 486



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 52/99 (52%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H  I+  G+A +  + N ++++Y R GD+ ++ ++FD+M  ++ +SW  ++ GY
Sbjct: 428 RHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGY 487

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G    A +MF EM   G   N     SVL AC   G
Sbjct: 488 AIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSG 526


>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/642 (36%), Positives = 371/642 (57%), Gaps = 17/642 (2%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           ++  YA+    D +  +F  M  KD VSWN+MI      GC++ A +       D +   
Sbjct: 32  MITGYARNYRFDHALQLFYEMPVKDVVSWNSMI-----KGCFDCADLTMARKLFDEMPER 86

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD-SDVSVSNALLSLYADAGYLSRCLKVF 415
           +    +T+ +    G++  G+    EGL   +   D++  N+++  Y   G +   L++F
Sbjct: 87  SVVSWTTMIN----GFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLF 142

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS--PNGVTFINILAAASSFS 473
             MP  + +SW S+IG   D      EA+  +  M   G    P   T+  ++ A ++ S
Sbjct: 143 QEMPCRNVISWTSMIGGL-DQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANAS 201

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
               G Q+HA V K   + +  I  AL++ Y  C +M+D  ++F       + V W +++
Sbjct: 202 ALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVF-HGKLHMNVVIWTALV 260

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
           +GY  N     A+ +   MM+ G   +  +F + L++C  +  L+ G E+H   V+  LE
Sbjct: 261 TGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLE 320

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
            DV +G++L+ MY +CG ++     F  +  +N+ SWNS+I G A+HG G  AL  F+QM
Sbjct: 321 TDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQM 380

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGE 713
                 PD +TF G+LSACSH+G+  +G   FK  S+      +L+ ++CMVD+LGR+G+
Sbjct: 381 VRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGK 440

Query: 714 LDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLA 773
           L++ EE I  MP+  NS++W  +L AC   +  K E+  +AA  + ++EP  +  YVLL+
Sbjct: 441 LEEAEELIRNMPVKANSMVWLVLLSACTMHS--KLEVAERAAKCIIDLEPHCSSAYVLLS 498

Query: 774 NMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLK 833
           N+YAS  +W DV++ R+ MK+  + K+ G SW+T+K   + F++GD SHP  D IY+KL+
Sbjct: 499 NLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLE 558

Query: 834 ELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLR 892
            L  K+++ GYVP  +FAL D+E E KE ++SYHSE++A+ F L    +   I +MKNLR
Sbjct: 559 WLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLR 618

Query: 893 VCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           VCGDCHSA K I+KIV R+I++RDS RFHHF DG+CSCGDYW
Sbjct: 619 VCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 660



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 218/457 (47%), Gaps = 18/457 (3%)

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           P+ Y +  +IT  Y+      + LQ    M  K     D+   ++++ G     +   AR
Sbjct: 24  PDVYLYTMMITG-YARNYRFDHALQLFYEMPVK-----DVVSWNSMIKGCFDCADLTMAR 77

Query: 252 KIFEQMIQKNVVSMNGLMEGRRK-GK-EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
           K+F++M +++VVS   ++ G  + GK EV   L     F  +A  N ++  Y   G ++D
Sbjct: 78  KLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVED 137

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG--LMSSNFSLISTLSSC 367
              +F+ M  ++ +SW +MI GLDQ+G  EEA+  F  M   G  +  ++ +    +++C
Sbjct: 138 GLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITAC 197

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
           A+   +  G QIH    KLG   D  +S AL++ YA+   +   L+VF      + V W 
Sbjct: 198 ANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWT 257

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           +++  +        +A+K + +M R G  PN  +F + L +         G ++H   +K
Sbjct: 258 ALVTGYG-LNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVK 316

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
             +  +  + N+L+  Y +CG ++D   IF R+S +++ VSWNS+I G   +     A+ 
Sbjct: 317 LGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKNIVSWNSVIVGCAQHGCGMWALA 375

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERG---MEVHACGVRACLEFDVVIGSALVD 604
               M++     D  TF  +LSAC+     ++G    +  +    A ++ D    + +VD
Sbjct: 376 FFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHY--ACMVD 433

Query: 605 MYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARH 640
           +  + G+++ A      MPV+ N   W  ++S    H
Sbjct: 434 ILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMH 470



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 200/428 (46%), Gaps = 33/428 (7%)

Query: 131 AMYGSCLESTDC--ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRY 188
           +M   C +  D   AR++F+E+  R ++SW ++I+ + Q G       LF +M    FR 
Sbjct: 62  SMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMP---FRD 118

Query: 189 SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
               N   +G         V  G  L Q++           ++   ++++ G  + G   
Sbjct: 119 IAAWNSMIYGYCCNG---RVEDGLRLFQEMPC--------RNVISWTSMIGGLDQHGRSE 167

Query: 249 YARKIFEQMIQKNV------------VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
            A  +F QM+   V            ++         +G ++H ++ + G      +   
Sbjct: 168 EALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAA 227

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           L+  YA C  ++DS  VF   +  + V W  +++G   N  +E+A+  F  M R+G++ +
Sbjct: 228 LITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPN 287

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
             S  S L+SC  L  +  G++IH   +KLGL++DV V N+L+ +Y   G L+  + +F 
Sbjct: 288 QSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFK 347

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            + + + VSWNSVI   A        A+ ++  M R+   P+ +TF  +L+A S   M +
Sbjct: 348 RISKKNIVSWNSVIVGCAQ-HGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQ 406

Query: 477 LGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            G  +  +    N + E  +++   ++   G+ G++++ E++   M  + + + W  ++S
Sbjct: 407 KGRCLF-KYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLS 465

Query: 535 G-YIHNEL 541
              +H++L
Sbjct: 466 ACTMHSKL 473



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 163/405 (40%), Gaps = 89/405 (21%)

Query: 9   LQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSN 68
           LQ+       DV   N++I       DL  A KLFDEMP+R+ VSW  +++G+   G   
Sbjct: 46  LQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIE 105

Query: 69  EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV 128
            A  +F +M                          F+                D    N 
Sbjct: 106 VAEGLFYKM-------------------------PFR----------------DIAAWNS 124

Query: 129 LIAMYGSCLES-TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
           +I  YG C     +   R+F+E+  R++ISW S+I    Q G +     LF +M   G  
Sbjct: 125 MI--YGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMM--GCG 180

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             +KP   T+  +ITA  ++  S  Y   QI A V K G   D Y+ +AL++ +A     
Sbjct: 181 VEVKPTSSTYCCVITACANA--SALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQM 238

Query: 248 YYARKIFEQMIQKNVVSMNGL--------------------------------------- 268
             + ++F   +  NVV    L                                       
Sbjct: 239 EDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSC 298

Query: 269 --MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
             +E    G+E+H   ++ GL   V VGN L+ MY +CG ++D   +F+ +  K+ VSWN
Sbjct: 299 CGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWN 358

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           ++I G  Q+GC   A+  F  M R  +     +    LS+C+  G
Sbjct: 359 SVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSG 403



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 155/340 (45%), Gaps = 30/340 (8%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+   N++I  Y   G +    +LF EMP RN +SW  ++ G    G S EA  +F++M+
Sbjct: 118 DIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMM 177

Query: 79  RAGFLLNRYA--LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
             G  +   +     V+ AC     S    G+Q+H  V K   +FD  +S  LI  Y +C
Sbjct: 178 GCGVEVKPTSSTYCCVITACAN--ASALYQGVQIHAHVFKLGYSFDAYISAALITFYANC 235

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
            +  D + R+F      +++ W ++++ Y          K+F  M REG    + PN+ +
Sbjct: 236 KQMED-SLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREG----VLPNQSS 290

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           F S + +     L      ++I     K GL +D++VG++L+  + R GN      IF++
Sbjct: 291 FTSALNSCCG--LEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKR 348

Query: 257 MIQKNVVSMNGLMEGRRKGKEVHG----------YLIRSGLFDMVAVGNGLVNMYAKCGT 306
           + +KN+VS N ++ G  +    HG           ++RS +        GL++  +  G 
Sbjct: 349 ISKKNIVSWNSVIVGCAQ----HGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGM 404

Query: 307 IDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEA 341
               R +F++     S       +  M+  L ++G  EEA
Sbjct: 405 SQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEA 444



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 167/362 (46%), Gaps = 24/362 (6%)

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           DV +   +++ YA        L++F+ MP  D VSWNS+I    D   L + A K + +M
Sbjct: 25  DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADL-TMARKLFDEM 83

Query: 451 RR---AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
                  W+    T IN          GK+  +V   +       +    N+++  YG C
Sbjct: 84  PERSVVSWT----TMIN-----GFLQFGKI--EVAEGLFYKMPFRDIAAWNSMI--YGYC 130

Query: 508 --GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF--T 563
             G ++D  ++F  M   R+ +SW SMI G   +    +A+ L   MM  G  +     T
Sbjct: 131 CNGRVEDGLRLFQEMP-CRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSST 189

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +  V++ACA+ + L +G+++HA   +    FD  I +AL+  Y+ C +++ + R F    
Sbjct: 190 YCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKL 249

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
             NV  W ++++GY  +   + AL +F +M  +G LP+  +F   L++C     +D G +
Sbjct: 250 HMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWG-R 308

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
              + +   GL   +   + ++ +  R G L+     I K     N + W +V+  C + 
Sbjct: 309 EIHTAAVKLGLETDVFVGNSLIVMYYRCGNLND-GVVIFKRISKKNIVSWNSVIVGCAQH 367

Query: 744 NC 745
            C
Sbjct: 368 GC 369



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 118/255 (46%), Gaps = 10/255 (3%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  + K G+++D ++   LI  Y     +  + ++F      N V W  +V+GY     
Sbjct: 209 IHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCK 268

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             +A K+F EM+R G L N+ +  S L +C  CG     +G ++H   +K     D  V 
Sbjct: 269 HEDALKVFGEMMREGVLPNQSSFTSALNSC--CGLEALDWGREIHTAAVKLGLETDVFVG 326

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI MY  C    D    IF+ I  ++++SWNS+I   +Q G  +     F++M R   
Sbjct: 327 NSLIVMYYRCGNLND-GVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRS-- 383

Query: 187 RYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
              ++P+E TF  L++A ++S +      L +  +  K A +  D Y  + +V    R G
Sbjct: 384 --MVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHY--ACMVDILGRSG 439

Query: 246 NFYYARKIFEQMIQK 260
               A ++   M  K
Sbjct: 440 KLEEAEELIRNMPVK 454



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 15/174 (8%)

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
           RID A   FD +   +VY +  MI+GYAR+   D AL LF +M    P+ D V++  ++ 
Sbjct: 10  RIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEM----PVKDVVSWNSMIK 65

Query: 671 ACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNS 730
            C     +    K F  M +       +  ++ M++   + G+++  E    KMP    +
Sbjct: 66  GCFDCADLTMARKLFDEMPE-----RSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIA 120

Query: 731 LIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
                + G CC     + E G +   +  EM  +N +++  +       G+ E+
Sbjct: 121 AWNSMIYGYCCNG---RVEDGLR---LFQEMPCRNVISWTSMIGGLDQHGRSEE 168


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 248/698 (35%), Positives = 384/698 (55%), Gaps = 49/698 (7%)

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD---SRSVFRFMIGKDSVSWNTMISGLDQ 334
           +H  +I++GL +     + L+         D    + SVF  +   + + WNTM  G   
Sbjct: 21  IHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 80

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +     AI  +  M   GL+ ++++    L SCA L     GQQIHG  LKLG + D+ V
Sbjct: 81  SSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYV 140

Query: 395 SNALLSLY-------------------------------ADAGYLSRCLKVFFLMPEHDQ 423
             +L+S+Y                               A  GY+    K+F  +P  D 
Sbjct: 141 HTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDV 200

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSWN++I  +AD+     EA+  + +M +    P+  T + +++A +     +LG QVH+
Sbjct: 201 VSWNAIISGYADT-GNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHS 259

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
            +  + + +   I NAL+  Y KCGE++    +F  +S + D +SWN+MI GY H  L  
Sbjct: 260 WIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNK-DVISWNTMIGGYTHLNLYK 318

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC------GVRACLEFDVV 597
           +A+ L   M++ G+  +  T  ++L ACA +  ++ G  +H        GV         
Sbjct: 319 EALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASS---- 374

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           + ++L+DMY+KCG I+ A + F+ M  R + + N+MI G+A HG  + A  +FS+M+ +G
Sbjct: 375 LRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNG 434

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
             PD +TFVG+LSACSH+G++D G + F+SM+Q Y + P+LE + CM+DLLG  G   + 
Sbjct: 435 IEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEA 494

Query: 718 EEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYA 777
           EE IN M + P+ +IW ++L AC        ELG   A  L ++EP+N  +YVLL+N+YA
Sbjct: 495 EEMINTMTMEPDGVIWCSLLKACKMHG--NVELGESFAQKLIKIEPENPGSYVLLSNIYA 552

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
           + G+W +VA  R  + +  +KK  GCS + +   VH F+ GD+ HP    IY  L+E+  
Sbjct: 553 TAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 612

Query: 838 KMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGD 896
            + +AG+VP T   L ++E E K+  + +HSEK+A+AF +++      + I+KNLRVC +
Sbjct: 613 LLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRN 672

Query: 897 CHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CH A K ISKI  REI+ RD  RFHHF DG CSC DYW
Sbjct: 673 CHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 232/510 (45%), Gaps = 74/510 (14%)

Query: 76  EMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS 135
           +M++ G     YAL  +L  C                 +L  N  FDGL           
Sbjct: 24  QMIKTGLHNTNYALSRLLEFC-----------------ILSPN--FDGL----------- 53

Query: 136 CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
                  A  +FE I+  +L+ WN++   ++   D +S  KL+  M   G    L PN Y
Sbjct: 54  -----PYAISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLG----LLPNSY 104

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
           TF  L+ +   + L  S   QQI   V K G   DLYV ++L+S + + G +  A K+F+
Sbjct: 105 TFPFLLKSC--AKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFD 162

Query: 256 QMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
               ++VVS   L+ G                             YA  G I+ ++ +F 
Sbjct: 163 GSSHRDVVSYTALITG-----------------------------YASRGYIESAQKMFD 193

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            +  KD VSWN +ISG    G  +EA+  F  M +  +     ++++ +S+CA  G I L
Sbjct: 194 EIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQL 253

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G+Q+H      GL S++ + NAL+ LY+  G +     +F  +   D +SWN++IG +  
Sbjct: 254 GRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTH 313

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY--NVANE 493
              L  EA+  + +M R+G +PN VT ++IL A +       G  +H  + K    V N 
Sbjct: 314 LN-LYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNA 372

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM 553
           +++  +L+  Y KCG+++   ++F  M   R   + N+MI G+  +     A ++   M 
Sbjct: 373 SSLRTSLIDMYAKCGDIEAAHQVFNSM-HHRTLSACNAMIFGFAMHGRANAAFDIFSRMR 431

Query: 554 QRGQRLDHFTFATVLSACASVATLERGMEV 583
           + G   D  TF  +LSAC+    L+ G  +
Sbjct: 432 KNGIEPDDITFVGLLSACSHSGMLDLGRRI 461



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 206/453 (45%), Gaps = 63/453 (13%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGD------------------------- 35
           SK+ +  H  +LK G+  D+++  +LI++YV+ G                          
Sbjct: 119 SKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITG 178

Query: 36  ------LASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYAL 89
                 + SA K+FDE+P ++ VSW  I+SGY   G + EA  +FKEM++     +   +
Sbjct: 179 YASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTM 238

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
            +V+ AC + G    + G QVH  +       +  + N LI +Y  C E  + A  +F+ 
Sbjct: 239 VTVVSACAQSG--SIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGE-VETACGLFQG 295

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSS 207
           +  +D+ISWN++I  Y+          LF  M R G      PN+ T  S++   A   +
Sbjct: 296 LSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSG----ENPNDVTMLSILPACAQLGA 351

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
           +  G ++   I   +K  G+ +   + ++L+  +A+ G+   A ++F  M  + + + N 
Sbjct: 352 IDFGRWIHVYIDKRIK--GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNA 409

Query: 268 L-----MEGRRKGK-EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
           +     M GR     ++   + ++G+        GL++  +  G +D  R +FR M    
Sbjct: 410 MIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNY 469

Query: 322 SVS-----WNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
            ++     +  MI  L   G ++EA  ++N   M  DG++       S L +C   G + 
Sbjct: 470 KITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVI-----WCSLLKACKMHGNVE 524

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLS-LYADAG 406
           LG+    + +K  ++ +   S  LLS +YA AG
Sbjct: 525 LGESFAQKLIK--IEPENPGSYVLLSNIYATAG 555



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 195/452 (43%), Gaps = 86/452 (19%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGD---LASASKLFDEMPDRNSVSWACIVSGY 61
           ++ H Q++K G     +  + L+   +   +   L  A  +F+ + + N + W  +  G+
Sbjct: 19  RIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGH 78

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                   A K++  M+  G L N Y    +L++C +   S  K G Q+H  VLK     
Sbjct: 79  ALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVS--KEGQQIHGHVLKLGYEL 136

Query: 122 DGLVSNVLIAMY--------------GSCLEST----------------DCARRIFEEIE 151
           D  V   LI+MY              GS                     + A+++F+EI 
Sbjct: 137 DLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIP 196

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
            +D++SWN+IIS Y+  G+      LF  M +     ++KP+E T   ++T   +   SG
Sbjct: 197 VKDVVSWNAIISGYADTGNNKEALDLFKEMMKT----NVKPDEST---MVTVVSACAQSG 249

Query: 212 SYLL-QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
           S  L +Q+ + +   GL S+L + +AL+  +++ G    A  +F+ +  K+V+S N ++ 
Sbjct: 250 SIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIG 309

Query: 271 GRRK-----------------------------------------GKEVHGYLIR--SGL 287
           G                                            G+ +H Y+ +   G+
Sbjct: 310 GYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGV 369

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
            +  ++   L++MYAKCG I+ +  VF  M  +   + N MI G   +G    A   F  
Sbjct: 370 TNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSR 429

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           MR++G+   + + +  LS+C+  G + LG++I
Sbjct: 430 MRKNGIEPDDITFVGLLSACSHSGMLDLGRRI 461


>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/642 (36%), Positives = 371/642 (57%), Gaps = 17/642 (2%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           ++  YA+    D +  +F  M  KD VSWN+MI      GC++ A +       D +   
Sbjct: 48  MITGYARNYRFDHALQLFYEMPVKDVVSWNSMI-----KGCFDCADLTMARKLFDEMPER 102

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD-SDVSVSNALLSLYADAGYLSRCLKVF 415
           +    +T+ +    G++  G+    EGL   +   D++  N+++  Y   G +   L++F
Sbjct: 103 SVVSWTTMIN----GFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLF 158

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS--PNGVTFINILAAASSFS 473
             MP  + +SW S+IG   D      EA+  +  M   G    P   T+  ++ A ++ S
Sbjct: 159 QEMPCRNVISWTSMIGGL-DQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANAS 217

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
               G Q+HA V K   + +  I  AL++ Y  C +M+D  ++F       + V W +++
Sbjct: 218 ALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVF-HGKLHMNVVIWTALV 276

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
           +GY  N     A+ +   MM+ G   +  +F + L++C  +  L+ G E+H   V+  LE
Sbjct: 277 TGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLE 336

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
            DV +G++L+ MY +CG ++     F  +  +N+ SWNS+I G A+HG G  AL  F+QM
Sbjct: 337 TDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQM 396

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGE 713
                 PD +TF G+LSACSH+G+  +G   FK  S+      +L+ ++CMVD+LGR+G+
Sbjct: 397 VRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGK 456

Query: 714 LDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLA 773
           L++ EE I  MP+  NS++W  +L AC   +  K E+  +AA  + ++EP  +  YVLL+
Sbjct: 457 LEEAEELIRNMPVKANSMVWLVLLSACTMHS--KLEVAERAAKCIIDLEPHCSSAYVLLS 514

Query: 774 NMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLK 833
           N+YAS  +W DV++ R+ MK+  + K+ G SW+T+K   + F++GD SHP  D IY+KL+
Sbjct: 515 NLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLE 574

Query: 834 ELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLR 892
            L  K+++ GYVP  +FAL D+E E KE ++SYHSE++A+ F L    +   I +MKNLR
Sbjct: 575 WLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLR 634

Query: 893 VCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           VCGDCHSA K I+KIV R+I++RDS RFHHF DG+CSCGDYW
Sbjct: 635 VCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 218/457 (47%), Gaps = 18/457 (3%)

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           P+ Y +  +IT  Y+      + LQ    M  K     D+   ++++ G     +   AR
Sbjct: 40  PDVYLYTMMITG-YARNYRFDHALQLFYEMPVK-----DVVSWNSMIKGCFDCADLTMAR 93

Query: 252 KIFEQMIQKNVVSMNGLMEGRRK-GK-EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
           K+F++M +++VVS   ++ G  + GK EV   L     F  +A  N ++  Y   G ++D
Sbjct: 94  KLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVED 153

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG--LMSSNFSLISTLSSC 367
              +F+ M  ++ +SW +MI GLDQ+G  EEA+  F  M   G  +  ++ +    +++C
Sbjct: 154 GLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITAC 213

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
           A+   +  G QIH    KLG   D  +S AL++ YA+   +   L+VF      + V W 
Sbjct: 214 ANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWT 273

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           +++  +        +A+K + +M R G  PN  +F + L +         G ++H   +K
Sbjct: 274 ALVTGYG-LNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVK 332

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
             +  +  + N+L+  Y +CG ++D   IF R+S +++ VSWNS+I G   +     A+ 
Sbjct: 333 LGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKNIVSWNSVIVGCAQHGCGMWALA 391

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERG---MEVHACGVRACLEFDVVIGSALVD 604
               M++     D  TF  +LSAC+     ++G    +  +    A ++ D    + +VD
Sbjct: 392 FFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHY--ACMVD 449

Query: 605 MYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARH 640
           +  + G+++ A      MPV+ N   W  ++S    H
Sbjct: 450 ILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMH 486



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 200/428 (46%), Gaps = 33/428 (7%)

Query: 131 AMYGSCLESTDC--ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRY 188
           +M   C +  D   AR++F+E+  R ++SW ++I+ + Q G       LF +M    FR 
Sbjct: 78  SMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMP---FRD 134

Query: 189 SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
               N   +G         V  G  L Q++           ++   ++++ G  + G   
Sbjct: 135 IAAWNSMIYGYCCNG---RVEDGLRLFQEMPC--------RNVISWTSMIGGLDQHGRSE 183

Query: 249 YARKIFEQMIQKNV------------VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
            A  +F QM+   V            ++         +G ++H ++ + G      +   
Sbjct: 184 EALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAA 243

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           L+  YA C  ++DS  VF   +  + V W  +++G   N  +E+A+  F  M R+G++ +
Sbjct: 244 LITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPN 303

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
             S  S L+SC  L  +  G++IH   +KLGL++DV V N+L+ +Y   G L+  + +F 
Sbjct: 304 QSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFK 363

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            + + + VSWNSVI   A        A+ ++  M R+   P+ +TF  +L+A S   M +
Sbjct: 364 RISKKNIVSWNSVIVGCAQ-HGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQ 422

Query: 477 LGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            G  +  +    N + E  +++   ++   G+ G++++ E++   M  + + + W  ++S
Sbjct: 423 KGRCLF-KYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLS 481

Query: 535 G-YIHNEL 541
              +H++L
Sbjct: 482 ACTMHSKL 489



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 163/405 (40%), Gaps = 89/405 (21%)

Query: 9   LQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSN 68
           LQ+       DV   N++I       DL  A KLFDEMP+R+ VSW  +++G+   G   
Sbjct: 62  LQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIE 121

Query: 69  EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV 128
            A  +F +M                          F+                D    N 
Sbjct: 122 VAEGLFYKM-------------------------PFR----------------DIAAWNS 140

Query: 129 LIAMYGSCLES-TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
           +I  YG C     +   R+F+E+  R++ISW S+I    Q G +     LF +M   G  
Sbjct: 141 MI--YGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMM--GCG 196

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             +KP   T+  +ITA  ++  S  Y   QI A V K G   D Y+ +AL++ +A     
Sbjct: 197 VEVKPTSSTYCCVITACANA--SALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQM 254

Query: 248 YYARKIFEQMIQKNVVSMNGL--------------------------------------- 268
             + ++F   +  NVV    L                                       
Sbjct: 255 EDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSC 314

Query: 269 --MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
             +E    G+E+H   ++ GL   V VGN L+ MY +CG ++D   +F+ +  K+ VSWN
Sbjct: 315 CGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWN 374

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           ++I G  Q+GC   A+  F  M R  +     +    LS+C+  G
Sbjct: 375 SVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSG 419



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 155/340 (45%), Gaps = 30/340 (8%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+   N++I  Y   G +    +LF EMP RN +SW  ++ G    G S EA  +F++M+
Sbjct: 134 DIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMM 193

Query: 79  RAGFLLNRYA--LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
             G  +   +     V+ AC     S    G+Q+H  V K   +FD  +S  LI  Y +C
Sbjct: 194 GCGVEVKPTSSTYCCVITACAN--ASALYQGVQIHAHVFKLGYSFDAYISAALITFYANC 251

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
            +  D + R+F      +++ W ++++ Y          K+F  M REG    + PN+ +
Sbjct: 252 KQMED-SLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREG----VLPNQSS 306

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           F S + +     L      ++I     K GL +D++VG++L+  + R GN      IF++
Sbjct: 307 FTSALNSCCG--LEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKR 364

Query: 257 MIQKNVVSMNGLMEGRRKGKEVHG----------YLIRSGLFDMVAVGNGLVNMYAKCGT 306
           + +KN+VS N ++ G  +    HG           ++RS +        GL++  +  G 
Sbjct: 365 ISKKNIVSWNSVIVGCAQ----HGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGM 420

Query: 307 IDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEA 341
               R +F++     S       +  M+  L ++G  EEA
Sbjct: 421 SQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEA 460



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 167/362 (46%), Gaps = 24/362 (6%)

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           DV +   +++ YA        L++F+ MP  D VSWNS+I    D   L + A K + +M
Sbjct: 41  DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADL-TMARKLFDEM 99

Query: 451 RR---AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
                  W+    T IN          GK+  +V   +       +    N+++  YG C
Sbjct: 100 PERSVVSWT----TMIN-----GFLQFGKI--EVAEGLFYKMPFRDIAAWNSMI--YGYC 146

Query: 508 --GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF--T 563
             G ++D  ++F  M   R+ +SW SMI G   +    +A+ L   MM  G  +     T
Sbjct: 147 CNGRVEDGLRLFQEMP-CRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSST 205

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +  V++ACA+ + L +G+++HA   +    FD  I +AL+  Y+ C +++ + R F    
Sbjct: 206 YCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKL 265

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
             NV  W ++++GY  +   + AL +F +M  +G LP+  +F   L++C     +D G +
Sbjct: 266 HMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWG-R 324

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
              + +   GL   +   + ++ +  R G L+     I K     N + W +V+  C + 
Sbjct: 325 EIHTAAVKLGLETDVFVGNSLIVMYYRCGNLND-GVVIFKRISKKNIVSWNSVIVGCAQH 383

Query: 744 NC 745
            C
Sbjct: 384 GC 385



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 10/254 (3%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  + K G+++D ++   LI  Y     +  + ++F      N V W  +V+GY      
Sbjct: 226 HAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKH 285

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            +A K+F EM+R G L N+ +  S L +C  CG     +G ++H   +K     D  V N
Sbjct: 286 EDALKVFGEMMREGVLPNQSSFTSALNSC--CGLEALDWGREIHTAAVKLGLETDVFVGN 343

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI MY  C    D    IF+ I  ++++SWNS+I   +Q G  +     F++M R    
Sbjct: 344 SLIVMYYRCGNLND-GVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRS--- 399

Query: 188 YSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
             ++P+E TF  L++A ++S +      L +  +  K A +  D Y  + +V    R G 
Sbjct: 400 -MVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHY--ACMVDILGRSGK 456

Query: 247 FYYARKIFEQMIQK 260
              A ++   M  K
Sbjct: 457 LEEAEELIRNMPVK 470



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 15/174 (8%)

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
           RID A   FD +   +VY +  MI+GYAR+   D AL LF +M    P+ D V++  ++ 
Sbjct: 26  RIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEM----PVKDVVSWNSMIK 81

Query: 671 ACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNS 730
            C     +    K F  M +       +  ++ M++   + G+++  E    KMP    +
Sbjct: 82  GCFDCADLTMARKLFDEMPE-----RSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIA 136

Query: 731 LIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
                + G CC     + E G +   +  EM  +N +++  +       G+ E+
Sbjct: 137 AWNSMIYGYCCNG---RVEDGLR---LFQEMPCRNVISWTSMIGGLDQHGRSEE 184


>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
          Length = 798

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 256/710 (36%), Positives = 391/710 (55%), Gaps = 34/710 (4%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGLFDMV 291
           +A ++  AR GN   AR  FE M  +   S N L+ G    R      G   R    D+ 
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV-SWNTMISGLDQNGCYEEAIMNFCAMRR 350
           +    +  +  +  T+ D+ +    +    SV S+ +++ G  ++G   +AI  F  M  
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
              +S    L   L +    G +   +++  E      D DV    A+LS Y  AG ++ 
Sbjct: 141 RNHVSYTVLLGGLLDA----GRVNEARRLFDEMP----DRDVVAWTAMLSGYCQAGRITE 192

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEA--LVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
              +F  MP+ + VSW ++I  +A +    L  +  +   +     W+   V +I     
Sbjct: 193 ARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYI----- 247

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIE--NALLSCYGKCGEMDDCEKIFARMSERRDE 526
                  + GH   A  + +N   E  +   NA++  +G+ G +D  + +F +M ER D+
Sbjct: 248 -------QAGHVEDAAEL-FNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRER-DD 298

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
            +W++MI  Y  NE L +A++    M+ RG R ++ +  ++L+ CA++A L+ G EVHA 
Sbjct: 299 GTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAA 358

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            +R   + DV   SAL+ MY KCG +D A R F     +++  WNSMI+GYA+HG G++A
Sbjct: 359 MLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQA 418

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           L +F  M+L G  PD +T++G L+ACS+ G V EG + F SM+    + P  E +SCMVD
Sbjct: 419 LGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVD 478

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           LLGR+G +++  + I  MP+ P+++IW  ++GA CR + R  E+   AA  L E+EP NA
Sbjct: 479 LLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA-CRMH-RNAEIAEVAAKKLLELEPGNA 536

Query: 767 VNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE-SHPEK 825
             YVLL+++Y S G+WED +K RK +    + K  GCSW+     VH+F +GD  +HPE 
Sbjct: 537 GPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEH 596

Query: 826 DLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LP 884
             I   L++L+  + ++GY     F L D++ E K   + YHSE+ AVA+ L +  + +P
Sbjct: 597 AAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMP 656

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           IR+MKNLRVCGDCHSA K I+KI  REIVLRD+NRFHHF DG CSC DYW
Sbjct: 657 IRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANRFHHFKDGFCSCRDYW 706



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 130/535 (24%), Positives = 233/535 (43%), Gaps = 71/535 (13%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM------ 77
           N  I    R G++  A   F+ MP R + S+  +++GY    + + A  +F+ M      
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 78  ----VRAGFLLNRYALGSVLRACQECG--PSGFKF-----GMQVHCLVLKSNQTFDGLVS 126
               + +G  L R  L     A       PS   F     G   H L+  + + F  +  
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 127 NVLIA---MYGSCLES--TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              ++   + G  L++   + ARR+F+E+  RD+++W +++S Y Q G       LF  M
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            +                                              ++   +A++SG+
Sbjct: 201 PKR---------------------------------------------NVVSWTAMISGY 215

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVH--GYLIRSGLFDMVAVGNGLVN 299
           A+ G    ARK+FE M ++N VS   ++ G  +   V     L  +     VA  N ++ 
Sbjct: 216 AQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMV 275

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
            + + G +D +++VF  M  +D  +W+ MI   +QN    EA+  F  M   G+  +  S
Sbjct: 276 GFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPS 335

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           +IS L+ CA+L  +  G+++H   L+   D DV   +AL+++Y   G L +  +VF    
Sbjct: 336 VISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFE 395

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             D V WNS+I  +A    L  +A+  + DMR AG SP+G+T+I  L A S     K G 
Sbjct: 396 PKDIVMWNSMITGYA-QHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGR 454

Query: 480 QV-HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           ++ ++  +  ++       + ++   G+ G +++   +   M    D V W +++
Sbjct: 455 EIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM 509



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 108/463 (23%), Positives = 191/463 (41%), Gaps = 105/463 (22%)

Query: 16  FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFK 75
           F   V    +L+  YVR G LA A +LF +MP+RN VS+  ++ G    G  NEA ++F 
Sbjct: 108 FPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFD 167

Query: 76  EMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS 135
           EM                                            D +    +++ Y  
Sbjct: 168 EM-----------------------------------------PDRDVVAWTAMLSGYCQ 186

Query: 136 CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
               T+ AR +F+E+  R+++SW ++IS Y+Q G+     KLF  M           NE 
Sbjct: 187 AGRITE-ARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER--------NEV 237

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS--ALVSGFARLGNFYYARKI 253
           +        ++++L G      +    +    + +  V +  A++ GF + G    A+ +
Sbjct: 238 S--------WTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTV 289

Query: 254 FEQMIQKNVVSMNGLMEGRRK--------------------------------------- 274
           FE+M +++  + + +++   +                                       
Sbjct: 290 FEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVL 349

Query: 275 --GKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
             G+EVH  ++R   FDM V   + L+ MY KCG +D ++ VF     KD V WN+MI+G
Sbjct: 350 DYGREVHAAMLRCS-FDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITG 408

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI-HGEGLKLGLDS 390
             Q+G  E+A+  F  MR  G+     + I  L++C+  G +  G++I +   +   +  
Sbjct: 409 YAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRP 468

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                + ++ L   +G +     +   MP E D V W +++GA
Sbjct: 469 GAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 46/93 (49%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +L+  F  DVF  + LI +Y++ G+L  A ++F     ++ V W  +++GY   G+ 
Sbjct: 356 HAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLG 415

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            +A  +F +M  AG   +       L AC   G
Sbjct: 416 EQALGIFHDMRLAGMSPDGITYIGALTACSYTG 448


>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
 gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
          Length = 839

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 272/836 (32%), Positives = 421/836 (50%), Gaps = 78/836 (9%)

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDL 155
           C   G S    G   H  +L S       VSN L+ MY  C  +   AR +F+ +  RD 
Sbjct: 12  CAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAH-ARGVFDVMPHRDT 70

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRM----------------QREGFRYSL--------- 190
           +SWN++++ Y+  GDT +   LF  M                QR  FR S+         
Sbjct: 71  VSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARR 130

Query: 191 --KPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
              P+  T   L+ A     L    L  QI A+  K GL  D+  GSALV  + +  +  
Sbjct: 131 GVAPDRTTLAVLLKACGG--LEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLE 188

Query: 249 YARKIFEQMIQKNVVSMNGLMEG-----------------RRKG---------------- 275
            A + F  M ++N VS    + G                 +R G                
Sbjct: 189 DALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCA 248

Query: 276 --------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
                   +++H + I++       VG  +V++YAK  ++ D+R  F  +      + N 
Sbjct: 249 AITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNA 308

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           M+ GL + G   EA+  F  M R G+     SL    S+CA +   + G Q+H   +K G
Sbjct: 309 MMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSG 368

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
            D DV V NA+L LY     L     VF  M + D VSWN++I A   +E    + + Y 
Sbjct: 369 FDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECY-EDTIAYL 427

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
            +M R G  P+  T+ ++L A +     + G  VH + IK  +  +  + + ++  Y KC
Sbjct: 428 NEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKC 487

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
           G + + +K+  R+  + + VSWNS+ISG+  N+   +A      M+  G + DHFT+ATV
Sbjct: 488 GMITEAQKLHDRIGGQ-ELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATV 546

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           L  CA++AT+E G ++H   ++  +  D  I S LVDMY+KCG +  +   F+     + 
Sbjct: 547 LDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDF 606

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            SWN+MI GYA HG G +AL +F +M+    +P+H TFV VL ACSH GL+D+G ++F  
Sbjct: 607 VSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYL 666

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           M+  Y L PQLE F+CMVD+LGR+    +  +FI  MP+  +++IW+T+L  C     R+
Sbjct: 667 MTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSIC---KIRQ 723

Query: 748 -TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
             E+   AA+ +  ++P ++  Y+LL+N+YA  GKW DV++ R+ M++  +KKE GCSW+
Sbjct: 724 DVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWI 783

Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTK-FALFDLEPESKE 861
            ++  +H F+AGD+ HP    +YE L  L  +M+ +GY P +  FA  D E  + E
Sbjct: 784 EVQSEMHGFLAGDKVHPRSREVYEMLNNLIVEMKLSGYEPASALFAEVDEEGSTSE 839



 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 195/660 (29%), Positives = 314/660 (47%), Gaps = 54/660 (8%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D    NT++  Y   GD  +A+ LF  MPD + VSW  ++SGY  +GM  ++  +  EM 
Sbjct: 69  DTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMA 128

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           R G   +R  L  +L+AC   G      G+Q+H + +K+    D    + L+ MYG C  
Sbjct: 129 RRGVAPDRTTLAVLLKACG--GLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKC-R 185

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
           S + A R F  +  R+ +SW + I+   Q        +LF +MQR G   S       F 
Sbjct: 186 SLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFR 245

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           S    A  + LS +   +Q+ A   K    +D  VG+A+V  +A+  +   AR+ F  + 
Sbjct: 246 S---CAAITCLSTA---RQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLP 299

Query: 259 QKNVVSMNGLMEG-----------------RRKG---------------KEVHGYL---- 282
              V + N +M G                  R G                EV GYL    
Sbjct: 300 NHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQ 359

Query: 283 -----IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
                I+SG    V V N ++++Y KC  + ++  VF+ M  +DSVSWN +I+ L+QN C
Sbjct: 360 VHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNEC 419

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
           YE+ I     M R G+   +F+  S L +CA L  +  G  +HG+ +K GL  D  VS+ 
Sbjct: 420 YEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSST 479

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           ++ +Y   G ++   K+   +   + VSWNS+I  F+ ++    EA K++ +M   G  P
Sbjct: 480 VVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQ-SEEAQKFFSEMLDIGVKP 538

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           +  T+  +L   ++ +  +LG Q+H Q+IK  +  +  I + L+  Y KCG M D   +F
Sbjct: 539 DHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMF 598

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
            + +++ D VSWN+MI GY  +    +A+ +   M Q     +H TF  VL AC+ V  L
Sbjct: 599 EK-AQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLL 657

Query: 578 ERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMIS 635
           + G    +    R  LE  +   + +VD+  +      A +F   MP+  +   W +++S
Sbjct: 658 DDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLS 717



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 144/570 (25%), Positives = 249/570 (43%), Gaps = 52/570 (9%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K G   DV   + L+++Y +   L  A + F  M +RNSVSW   ++G      
Sbjct: 158 IHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQ 217

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
                ++F +M R G  +++ A  SV R+C     +      Q+H   +K+  + D +V 
Sbjct: 218 YTRGLELFVQMQRLGLGVSQPAYASVFRSC--AAITCLSTARQLHAHAIKNKFSADRVVG 275

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
             ++ +Y       D ARR F  +    + + N+++    + G      +LF  M R G 
Sbjct: 276 TAIVDVYAKADSLVD-ARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGI 334

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
            + +      F +   A     L G     Q+  +  K+G   D+ V +A++  + +   
Sbjct: 335 GFDVVSLSGVFSA--CAEVKGYLQG----LQVHCLAIKSGFDVDVCVRNAILDLYGKCKA 388

Query: 247 FYYARKIFEQMIQKNVVSMNGLM-----------------EGRRKGKE------------ 277
              A  +F++M Q++ VS N ++                 E  R G E            
Sbjct: 389 LVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKA 448

Query: 278 ------------VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                       VHG  I+SGL     V + +V+MY KCG I +++ +   + G++ VSW
Sbjct: 449 CAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSW 508

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N++ISG   N   EEA   F  M   G+   +F+  + L +CA+L  I LG+QIHG+ +K
Sbjct: 509 NSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIK 568

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
             +  D  +S+ L+ +YA  G +   L +F    + D VSWN++I  +A       EA++
Sbjct: 569 QEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYA-LHGQGFEALE 627

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCY 504
            +  M++A   PN  TF+ +L A S   +   G    +    +Y +  +      ++   
Sbjct: 628 MFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMVDIL 687

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           G+     +  K    M    D V W +++S
Sbjct: 688 GRSKGPQEALKFIRSMPLEADAVIWKTLLS 717



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 197/421 (46%), Gaps = 70/421 (16%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H   +K+ F+ D  +   +++VY +   L  A + F  +P+    +   ++ G   
Sbjct: 256 ARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVR 315

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+  EA ++F+ M R+G   +  +L  V  AC E    G+  G+QVHCL +KS    D 
Sbjct: 316 TGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEV--KGYLQGLQVHCLAIKSGFDVDV 373

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR---GDTISVFKLFSR 180
            V N ++ +YG C    + A  +F+E+E RD +SWN+II+   Q     DTI+       
Sbjct: 374 CVRNAILDLYGKCKALVE-AYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLN---- 428

Query: 181 MQREGFRYSLKPNEYTFGSLITAA-------YSSVLSGSYLLQQILAMVKKAGLLSDLYV 233
              E  RY ++P+++T+GS++ A        Y SV+ G  +         K+GL  D +V
Sbjct: 429 ---EMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAI---------KSGLGLDAFV 476

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------------------- 271
            S +V  + + G    A+K+ +++  + +VS N ++ G                      
Sbjct: 477 SSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGV 536

Query: 272 -------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
                                 GK++HG +I+  +     + + LV+MYAKCG + DS  
Sbjct: 537 KPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLL 596

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           +F      D VSWN MI G   +G   EA+  F  M++  ++ ++ + ++ L +C+ +G 
Sbjct: 597 MFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGL 656

Query: 373 I 373
           +
Sbjct: 657 L 657



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 200/441 (45%), Gaps = 33/441 (7%)

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
           ++ FS +  L + A    +  GQ  H   L  G      VSN LL +YA  G  +    V
Sbjct: 2   TATFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGV 61

Query: 415 FFLMPEHDQVSWNSVIGAFADS---------------------EALVS---------EAV 444
           F +MP  D VSWN+++ A+A +                      AL+S         ++V
Sbjct: 62  FDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSV 121

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
              ++M R G +P+  T   +L A        LG Q+HA  +K  +  +    +AL+  Y
Sbjct: 122 GLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMY 181

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
           GKC  ++D  + F  M E R+ VSW + I+G + NE   + + L   M + G  +    +
Sbjct: 182 GKCRSLEDALRFFHGMGE-RNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAY 240

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
           A+V  +CA++  L    ++HA  ++     D V+G+A+VD+Y+K   +  A R F  +P 
Sbjct: 241 ASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPN 300

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
             V + N+M+ G  R G G +AL LF  M   G   D V+  GV SAC+      +G + 
Sbjct: 301 HTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQ- 359

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
              ++   G    +   + ++DL G+   L +      +M    +S+ W  ++ A  +  
Sbjct: 360 VHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEME-QRDSVSWNAIIAALEQNE 418

Query: 745 CRKTELGRKAANMLFEMEPQN 765
           C +  +      + + MEP +
Sbjct: 419 CYEDTIAYLNEMLRYGMEPDD 439


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 247/668 (36%), Positives = 367/668 (54%), Gaps = 43/668 (6%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R  + VH  +I   L    ++G  L+  YA    +  +R VF  +  ++ +  N MI   
Sbjct: 56  RTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSY 115

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
             NG Y E +  F  M    +   +++    L +C+  G I++G++IHG   K+GL S +
Sbjct: 116 VNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V N L+S+Y   G+LS    V   M   D VSWNS++  +A ++    +A++   +M  
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRF-DDALEVCREMES 234

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
              S +  T  ++L A S+                      TT EN +            
Sbjct: 235 VKISHDAGTMASLLPAVSN----------------------TTTENVMY----------- 261

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
            + +F +M  ++  VSWN MI  Y+ N +  +A+ L   M   G   D  +  +VL AC 
Sbjct: 262 VKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACG 320

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
             + L  G ++H    R  L  ++++ +AL+DMY+KCG ++ A   F+ M  R+V SW +
Sbjct: 321 DTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTA 380

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           MIS Y   G G  A+ LFS+++  G +PD + FV  L+ACSHAGL++EG   FK M+  Y
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHY 440

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
            + P+LE  +CMVDLLGRAG++ +   FI  M + PN  +W  +LGA CR +   T++G 
Sbjct: 441 KITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA-CRVHS-DTDIGL 498

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
            AA+ LF++ P+ +  YVLL+N+YA  G+WE+V   R  MK   +KK  G S V +   +
Sbjct: 499 LAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRII 558

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
           H F+ GD SHP+ D IY +L  L +KM++ GYVP ++ AL D+E E KE  ++ HSEK+A
Sbjct: 559 HTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLA 618

Query: 873 VAFVL------TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           + F L        +S   IRI KNLR+CGDCH A K IS+I  REI++RD+NRFH F  G
Sbjct: 619 IVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFG 678

Query: 927 KCSCGDYW 934
            CSCGDYW
Sbjct: 679 VCSCGDYW 686



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 182/382 (47%), Gaps = 19/382 (4%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H +I+      +  L   L+  Y  + D+ASA K+FDE+P+RN +    ++  Y + 
Sbjct: 59  RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   E  K+F  M       + Y    VL+AC   G      G ++H    K   +    
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGT--IVIGRKIHGSATKVGLSSTLF 176

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V N L++MYG C   ++ AR + +E+  RD++SWNS++  Y+Q        ++   M+  
Sbjct: 177 VGNGLVSMYGKCGFLSE-ARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMES- 234

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLS-DLYVGSALVSGFAR 243
                +  +  T  SL+ A  ++       ++ +   + K  L+S ++ +G  + +    
Sbjct: 235 ---VKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPV 291

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGL 297
                Y+R +     + + VS+  ++           GK++HGY+ R  L   + + N L
Sbjct: 292 EAVELYSR-MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENAL 350

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS--GLDQNGCYEEAIMNFCAMRRDGLMS 355
           ++MYAKCG ++ +R VF  M  +D VSW  MIS  G    GC  +A+  F  ++  GL+ 
Sbjct: 351 IDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGC--DAVALFSKLQDSGLVP 408

Query: 356 SNFSLISTLSSCASLGWIMLGQ 377
            + + ++TL++C+  G +  G+
Sbjct: 409 DSIAFVTTLAACSHAGLLEEGR 430


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 261/801 (32%), Positives = 424/801 (52%), Gaps = 56/801 (6%)

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSN-QTFDGLVSNVLIAMYGSCLESTDCARRIF 147
           L +VLR C    PS    G+QVH   + +     D  +   L+ MY       D A  +F
Sbjct: 42  LLAVLRGC--VSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRD-AVAVF 98

Query: 148 EEIE---TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA 204
             +        + WN +I   +  GD  S    + +M       +  P+ +TF  ++ + 
Sbjct: 99  SSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMW--AHPSAPLPDSHTFPYVVKSC 156

Query: 205 YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS 264
             + L    L + +    +  GL  D++VGSAL+  +A  G  + AR++F+ M +++ V 
Sbjct: 157 --AALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVL 214

Query: 265 MNGLMEGRRK-----------------------------------------GKEVHGYLI 283
            N +M+G  K                                         G ++H   +
Sbjct: 215 WNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAV 274

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
           + GL   VAV N LV+MYAKC  +DD   +F  M   D V+WN MISG  QNG  ++A++
Sbjct: 275 KYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALL 334

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            FC M++ G+   + +L+S L +   L     G+++HG  ++  +  DV + +AL+ +Y 
Sbjct: 335 LFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYF 394

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
               +     V+      D V  +++I  +     +  EAVK +  +   G  PN V   
Sbjct: 395 KCRAVRMAQSVYDSSKAIDVVIGSTMISGYV-LNGMSQEAVKMFRYLLEQGIRPNAVAIA 453

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           ++L A +S +  KLG ++H+  +K        +E+AL+  Y KCG +D    IF+++S +
Sbjct: 454 SVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAK 513

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
            DEV+WNSMIS +  N    +A+NL   M   G +  + T ++VLSACAS+  +  G E+
Sbjct: 514 -DEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEI 572

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           H   ++  +  D+   SAL+DMY KCG +++A R F+ MP +N  SWNS+I+ Y  +G  
Sbjct: 573 HGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLV 632

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC 703
            ++++L   M+ +G   DHVTF+ ++SAC+HAG V EG + F+ M++ Y + P++E F+C
Sbjct: 633 KESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFAC 692

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP 763
           MVDL  RAG+LDK  E I  MP  P++ IW  +L A CR + R  EL   A+  LF+++P
Sbjct: 693 MVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHA-CRVH-RNVELAEIASQELFKLDP 750

Query: 764 QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHP 823
            N+  YVL++N+ A  G+W+ V+K R+ MK+ +V+K  G SWV + +  H+FVA D+SHP
Sbjct: 751 HNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHP 810

Query: 824 EKDLIYEKLKELNQKMRDAGY 844
           + + IY  LK +  ++R+ G+
Sbjct: 811 DSEDIYMSLKSILLELREEGH 831



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 166/571 (29%), Positives = 276/571 (48%), Gaps = 52/571 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +L H      G   D+F+ + LI +Y   G L  A ++FD M +R+ V W  ++ GY   
Sbjct: 166 RLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKA 225

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G  + A ++F +M  +G   N   L   L        S   FG+Q+H L +K     +  
Sbjct: 226 GSVSSAVELFGDMRASGCEPNFATLACFLSV--SATESDLFFGVQLHTLAVKYGLESEVA 283

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V+N L++MY  C +  D   ++F  +   DL++WN +IS   Q G       LF  MQ+ 
Sbjct: 284 VANTLVSMYAKC-KCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKS 342

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSG--------SYLLQQILAM-VKKAGLLSDLY--- 232
           G R    P+  T  SL+ A   + L+G         Y+++  + M V     L D+Y   
Sbjct: 343 GIR----PDSVTLVSLLPAL--TDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKC 396

Query: 233 -------------------VGSALVSGFARLGNFYYARKIF----EQMIQKNVVSMNGL- 268
                              +GS ++SG+   G    A K+F    EQ I+ N V++  + 
Sbjct: 397 RAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVL 456

Query: 269 -----MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                M   + G+E+H Y +++       V + L++MYAKCG +D S  +F  +  KD V
Sbjct: 457 PACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEV 516

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           +WN+MIS   QNG  EEA+  F  M  +G+  SN ++ S LS+CASL  I  G++IHG  
Sbjct: 517 TWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVV 576

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           +K  + +D+   +AL+ +Y   G L    +VF  MPE ++VSWNS+I ++  +  LV E+
Sbjct: 577 IKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYG-AYGLVKES 635

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV-HAQVIKYNVANETTIENALLS 502
           V     M+  G+  + VTF+ +++A +     + G ++      +Y +A        ++ 
Sbjct: 636 VSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVD 695

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            Y + G++D   ++   M  + D   W +++
Sbjct: 696 LYSRAGKLDKAMELIVDMPFKPDAGIWGALL 726


>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
 gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
          Length = 706

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 255/710 (35%), Positives = 391/710 (55%), Gaps = 34/710 (4%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGLFDMV 291
           +A ++  AR GN   AR  FE M  +   S N L+ G    R      G   R    D+ 
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV-SWNTMISGLDQNGCYEEAIMNFCAMRR 350
           +    +  +  +  T+ D+ +    +    SV S+ +++ G  ++G   +AI  F  M  
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
              +S    L   L +    G +   +++  E      D DV    A+LS Y  AG ++ 
Sbjct: 141 RNHVSYTVLLGGLLDA----GRVNEARRLFDEMP----DRDVVAWTAMLSGYCQAGRITE 192

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEA--LVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
              +F  MP+ + VSW ++I  +A +    L  +  +   +     W+   V +I     
Sbjct: 193 ARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYI----- 247

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIE--NALLSCYGKCGEMDDCEKIFARMSERRDE 526
                  + GH   A  + +N   E  +   NA++  +G+ G +D  + +F +M ER D+
Sbjct: 248 -------QAGHVEDAAEL-FNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCER-DD 298

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
            +W++MI  Y  NE L +A++    M+ RG R ++ +  ++L+ CA++A L+ G EVHA 
Sbjct: 299 GTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAA 358

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            +R   + DV   SAL+ MY KCG +D A R F     +++  WNSMI+GYA+HG G++A
Sbjct: 359 MLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQA 418

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           L +F  M+L G  PD +T++G L+ACS+ G V EG + F SM+    + P  E +SCMVD
Sbjct: 419 LGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVD 478

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           LLGR+G +++  + I  MP+ P+++IW  ++GA CR + R  E+   AA  L E+EP NA
Sbjct: 479 LLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA-CRMH-RNAEIAEFAAKKLLELEPGNA 536

Query: 767 VNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE-SHPEK 825
             YVLL+++Y S G+WED +K RK +    + K  GCSW+     VH+F +GD  +HPE 
Sbjct: 537 GPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEH 596

Query: 826 DLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LP 884
             I   L++L+  + ++GY     F L D++ E K   + YHSE+ AVA+ L +  + +P
Sbjct: 597 AAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMP 656

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           IR+MKNLRVCGDCHSA K I+KI  REI+LRD+NRFHHF DG CSC DYW
Sbjct: 657 IRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 130/535 (24%), Positives = 233/535 (43%), Gaps = 71/535 (13%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM------ 77
           N  I    R G++  A   F+ MP R + S+  +++GY    + + A  +F+ M      
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 78  ----VRAGFLLNRYALGSVLRACQECG--PSGFKF-----GMQVHCLVLKSNQTFDGLVS 126
               + +G  L R  L     A       PS   F     G   H L+  + + F  +  
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 127 NVLIA---MYGSCLES--TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              ++   + G  L++   + ARR+F+E+  RD+++W +++S Y Q G       LF  M
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            +                                              ++   +A++SG+
Sbjct: 201 PKR---------------------------------------------NVVSWTAMISGY 215

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVH--GYLIRSGLFDMVAVGNGLVN 299
           A+ G    ARK+FE M ++N VS   ++ G  +   V     L  +     VA  N ++ 
Sbjct: 216 AQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMV 275

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
            + + G +D +++VF  M  +D  +W+ MI   +QN    EA+  F  M   G+  +  S
Sbjct: 276 GFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPS 335

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           +IS L+ CA+L  +  G+++H   L+   D DV   +AL+++Y   G L +  +VF    
Sbjct: 336 VISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFE 395

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             D V WNS+I  +A    L  +A+  + DMR AG SP+G+T+I  L A S     K G 
Sbjct: 396 PKDIVMWNSMITGYA-QHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGR 454

Query: 480 QV-HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           ++ ++  +  ++       + ++   G+ G +++   +   M    D V W +++
Sbjct: 455 EIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM 509



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 109/466 (23%), Positives = 193/466 (41%), Gaps = 111/466 (23%)

Query: 16  FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFK 75
           F   V    +L+  YVR G LA A +LF +MP+RN VS+  ++ G    G  NEA ++F 
Sbjct: 108 FPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFD 167

Query: 76  EMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS 135
           EM                                            D +    +++ Y  
Sbjct: 168 EM-----------------------------------------PDRDVVAWTAMLSGYCQ 186

Query: 136 CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
               T+ AR +F+E+  R+++SW ++IS Y+Q G+     KLF  M           NE 
Sbjct: 187 AGRITE-ARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER--------NEV 237

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS--ALVSGFARLGNFYYARKI 253
           +        ++++L G      +    +    + +  V +  A++ GF + G    A+ +
Sbjct: 238 S--------WTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTV 289

Query: 254 FEQMIQKNVVSMNGLMEGRRK--------------------------------------- 274
           FE+M +++  + + +++   +                                       
Sbjct: 290 FEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVL 349

Query: 275 --GKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
             G+EVH  ++R   FDM V   + L+ MY KCG +D ++ VF     KD V WN+MI+G
Sbjct: 350 DYGREVHAAMLRCS-FDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITG 408

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
             Q+G  E+A+  F  MR  G+     + I  L++C+  G +  G++I      + ++S 
Sbjct: 409 YAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFN---SMTVNSS 465

Query: 392 VSVS----NALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           +       + ++ L   +G +     +   MP E D V W +++GA
Sbjct: 466 IRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 46/93 (49%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +L+  F  DVF  + LI +Y++ G+L  A ++F     ++ V W  +++GY   G+ 
Sbjct: 356 HAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLG 415

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            +A  +F +M  AG   +       L AC   G
Sbjct: 416 EQALGIFHDMRLAGMSPDGITYIGALTACSYTG 448


>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
 gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 592

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/561 (41%), Positives = 338/561 (60%), Gaps = 7/561 (1%)

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSL-YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           QQIH   +  GL    S+   LLS  YA A  +S   ++FF +P+ D   ++S+I     
Sbjct: 36  QQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLI-TLTS 94

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
             +   E++  Y  M  A  S +  TF  ++ +++  +   +G  +H  V       +  
Sbjct: 95  KFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAY 154

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           ++ AL+S Y K G +    K+F +M E+   V+WNSMISGY  N    +A+ L + M   
Sbjct: 155 VQAALVSFYAKSGHVMIARKVFDKMPEK-TVVAWNSMISGYEQNGFGKEAVELFFLMQDL 213

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G + D  TF ++LSACA V  +  G  VH    R C + +VV+G+AL++MYS+CG +  A
Sbjct: 214 GVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKA 273

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
              FD M  +N+ +W +MISGY  HGHG +A+ LF++M  DGP P++VTFV VLSAC+HA
Sbjct: 274 REVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHA 333

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI-NKMPITPNSLIWR 734
           GLVDEG + F +M Q YGL+P +E   CMVD+LGRAG L++  +FI N  P  P   +W 
Sbjct: 334 GLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWT 393

Query: 735 TVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKE 794
            +LGAC     +  +LG + A  L  +EP+N  +YV+L+N+YA  G+ + V K R  M  
Sbjct: 394 AMLGAC--KMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMIR 451

Query: 795 AEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFD 854
             +KKE G S + +   V++F  GD+SHP+ + IY  L EL  + R+AGY+P ++  + +
Sbjct: 452 NRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDELMSRCREAGYIPASESVMHE 511

Query: 855 LEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIV 913
           +E E +E  + YHSEK+A+AF +L   S + IRI+KNLR+C DCH+A K+IS I  REI 
Sbjct: 512 VEEEEREYALRYHSEKLAIAFGLLKTGSGVAIRIVKNLRMCEDCHTAIKYISIIANREIN 571

Query: 914 LRDSNRFHHFNDGKCSCGDYW 934
           +RD  RFHHF DG CSC DYW
Sbjct: 572 VRDRLRFHHFKDGSCSCQDYW 592



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 161/349 (46%), Gaps = 38/349 (10%)

Query: 191 KPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDL----YVGSALVSGFARLGN 246
           KP+ + F SLIT      L+  +   Q   +  +  LL+++    Y  SA++   A L  
Sbjct: 80  KPDTFLFHSLIT------LTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTA 133

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
           F     I                         H Y+   GL   V     LV+ YAK G 
Sbjct: 134 FSIGETI-----------------------HCHVYICGYGLDAYVQAA--LVSFYAKSGH 168

Query: 307 IDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
           +  +R VF  M  K  V+WN+MISG +QNG  +EA+  F  M+  G+   + + +S LS+
Sbjct: 169 VMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSA 228

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSW 426
           CA +G I LG  +H    +   D +V +  AL+++Y+  G +S+  +VF  M E + V+W
Sbjct: 229 CAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFDSMEEKNIVAW 288

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
            ++I  +       S+A++ + +M   G  PN VTF+ +L+A +   +   G Q+   + 
Sbjct: 289 TAMISGYG-MHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMK 347

Query: 487 K-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS-WNSMI 533
           + Y +      +  ++   G+ G +++  +     S +    + W +M+
Sbjct: 348 QEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAML 396



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 155/339 (45%), Gaps = 34/339 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +   G+  D ++   L++ Y + G +  A K+FD+MP++  V+W  ++SGY   G  
Sbjct: 141 HCHVYICGYGLDAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFG 200

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA ++F  M   G   +     S+L AC + G  G   G  VH  + ++    + ++  
Sbjct: 201 KEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIG--LGFWVHEYIARNCFDLNVVLGT 258

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY  C  +   AR +F+ +E +++++W ++IS Y   G      +LF+ M  +G R
Sbjct: 259 ALMNMYSRC-GNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPR 317

Query: 188 YSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKA-GLLSDLYVGSALVSGFARLG 245
               PN  TF ++++A A++ ++      +QI   +K+  GL+  +     +V    R G
Sbjct: 318 ----PNNVTFVAVLSACAHAGLVDEG---RQIFTTMKQEYGLVPSVEHQVCMVDMLGRAG 370

Query: 246 NFYYARKIFEQMIQKNV-----VSMNGLMEGRRK---GKEVHGYLI-----RSGLFDMVA 292
           +   A +  +    K        +M G  +  +    G EV  +L+       G + M  
Sbjct: 371 HLNEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVM-- 428

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIG---KDSVSWNTM 328
               L N+YA  G +D    +   MI    K  V ++T+
Sbjct: 429 ----LSNIYALAGRMDRVEKIRNIMIRNRLKKEVGYSTI 463


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 229/547 (41%), Positives = 331/547 (60%), Gaps = 8/547 (1%)

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           D+   N ++  YA  G L +  K+F  MP+ D  SWN+ I  +  +     EA++ +  M
Sbjct: 152 DLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYV-THNQPREALELFRVM 210

Query: 451 RRAGWSP-NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           +R   S  N  T  + LAA+++    +LG ++H  +I+  +  +  + +ALL  YGKCG 
Sbjct: 211 QRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGS 270

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           +D+   IF +M +R D VSW +MI     +    +   L   +MQ G R + +TFA VL+
Sbjct: 271 LDEARGIFDQMKDR-DVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLN 329

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           ACA  A    G EVH   + A  +      SALV MYSKCG    A R F+ M   ++ S
Sbjct: 330 ACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVS 389

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           W S+I GYA++G  D+AL  F  +   G  PD VT+VGVLSAC+HAGLVD+G ++F S+ 
Sbjct: 390 WTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIK 449

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKT 748
           + +GL+   + ++C++DLL R+G   + E  I+ MP+ P+  +W ++LG C    N    
Sbjct: 450 EKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNL--- 506

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
           EL ++AA  L+E+EP+N   Y+ LAN+YA+ G W +VA  RK M    + K+ G SW+ +
Sbjct: 507 ELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEI 566

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
           K  VHVF+ GD SHP+   I+E L EL++K+++ GYVP T F L D+E E KE  + YHS
Sbjct: 567 KRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHS 626

Query: 869 EKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGK 927
           EK+AV F +++     PI++ KNLR C DCH+A K+ISKIV R+I +RDSNRFH F DG 
Sbjct: 627 EKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGS 686

Query: 928 CSCGDYW 934
           CSC DYW
Sbjct: 687 CSCKDYW 693



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 236/501 (47%), Gaps = 45/501 (8%)

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
           R   +P+   + +LI A          L +++ A  K +  +  +++ + L+  +A+ G+
Sbjct: 80  RTDHRPSARVYSTLIAACVRH--RALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGS 137

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
              A+ +F++M  +++ S N ++ G                             YAK G 
Sbjct: 138 LVDAQMLFDEMGHRDLCSWNTMIVG-----------------------------YAKLGR 168

Query: 307 IDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLS 365
           ++ +R +F  M  +D+ SWN  ISG   +    EA+  F  M+R    SSN F+L S L+
Sbjct: 169 LEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALA 228

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           + A++  + LG++IHG  ++  L+ D  V +ALL LY   G L     +F  M + D VS
Sbjct: 229 ASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVS 288

Query: 426 WNSVIG-AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           W ++I   F D      E    + D+ ++G  PN  TF  +L A +  +   LG +VH  
Sbjct: 289 WTTMIHRCFEDGRR--EEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGY 346

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
           ++       +   +AL+  Y KCG      ++F  M +  D VSW S+I GY  N    +
Sbjct: 347 MMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQ-PDLVSWTSLIVGYAQNGQPDE 405

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALV 603
           A++    ++Q G + D  T+  VLSAC     +++G+E  H+   +  L       + ++
Sbjct: 406 ALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVI 465

Query: 604 DMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGH---GDKALTLFSQMKLDGPL 659
           D+ ++ GR   A    D MPV+ + + W S++ G   HG+     +A     +++ + P 
Sbjct: 466 DLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENP- 524

Query: 660 PDHVTFVGVLSACSHAGLVDE 680
               T++ + +  ++AGL  E
Sbjct: 525 ---ATYITLANIYANAGLWSE 542



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 191/408 (46%), Gaps = 29/408 (7%)

Query: 22  LC--NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           LC  NT+I  Y ++G L  A KLFDEMP R++ SW   +SGY       EA ++F+ M R
Sbjct: 153 LCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQR 212

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
                +     S   A     P   + G ++H  ++++    D +V + L+ +YG C  S
Sbjct: 213 HERSSSNKFTLSSALAASAAIPC-LRLGKEIHGYLIRTELNLDEVVWSALLDLYGKC-GS 270

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
            D AR IF++++ RD++SW ++I    + G     F LF  + + G R    PNEYTF  
Sbjct: 271 LDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVR----PNEYTFAG 326

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           ++ A      +  +L +++   +  AG     +  SALV  +++ GN   AR++F +M Q
Sbjct: 327 VLNACADH--AAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQ 384

Query: 260 KNVVSMNGLMEGR----RKGKEVHGY--LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
            ++VS   L+ G     +  + +H +  L++SG         G+++     G +D     
Sbjct: 385 PDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEY 444

Query: 314 FRFMIGKDSV-----SWNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSS 366
           F  +  K  +      +  +I  L ++G ++EA  I++   ++ D      F   S L  
Sbjct: 445 FHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPD-----KFLWASLLGG 499

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
           C   G + L ++   + L      + +    L ++YA+AG  S    V
Sbjct: 500 CRIHGNLELAKRA-AKALYEIEPENPATYITLANIYANAGLWSEVANV 546



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 147/335 (43%), Gaps = 48/335 (14%)

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
           V EAV+    + R    P+   +  ++AA       +LG +VHA     N      I N 
Sbjct: 71  VKEAVEL---LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNR 127

Query: 500 LLSCYGKCGEMDDCEKIFARMSER------------------------------RDEVSW 529
           LL  Y KCG + D + +F  M  R                              RD  SW
Sbjct: 128 LLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSW 187

Query: 530 NSMISGYI-HNELLPKAMNLVWFMMQRGQR--LDHFTFATVLSACASVATLERGMEVHAC 586
           N+ ISGY+ HN+  P+    ++ +MQR +R   + FT ++ L+A A++  L  G E+H  
Sbjct: 188 NAAISGYVTHNQ--PREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGY 245

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            +R  L  D V+ SAL+D+Y KCG +D A   FD M  R+V SW +MI      G  ++ 
Sbjct: 246 LIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEG 305

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY----GLIPQLEQFS 702
             LF  +   G  P+  TF GVL+AC+     D   +H       Y    G  P     S
Sbjct: 306 FLLFRDLMQSGVRPNEYTFAGVLNACA-----DHAAEHLGKEVHGYMMHAGYDPGSFAIS 360

Query: 703 CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
            +V +  + G         N+M   P+ + W +++
Sbjct: 361 ALVHMYSKCGNTRVARRVFNEMH-QPDLVSWTSLI 394



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 166/399 (41%), Gaps = 70/399 (17%)

Query: 103 GFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSII 162
             + G +VH     SN      +SN L+ MY  C    D A+ +F+E+  RDL SWN++I
Sbjct: 102 ALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVD-AQMLFDEMGHRDLCSWNTMI 160

Query: 163 SVYSQRGDTISVFKLFSRM-QREGFRYSL---------KPNEY----------------T 196
             Y++ G      KLF  M QR+ F ++          +P E                  
Sbjct: 161 VGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNK 220

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           F      A S+ +    L ++I   + +  L  D  V SAL+  + + G+   AR IF+Q
Sbjct: 221 FTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQ 280

Query: 257 MIQKNVVSMNGLM-----EGRRK------------------------------------G 275
           M  ++VVS   ++     +GRR+                                    G
Sbjct: 281 MKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLG 340

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           KEVHGY++ +G        + LV+MY+KCG    +R VF  M   D VSW ++I G  QN
Sbjct: 341 KEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQN 400

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDVSV 394
           G  +EA+  F  + + G      + +  LS+C   G +  G +  H    K GL      
Sbjct: 401 GQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADH 460

Query: 395 SNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
              ++ L A +G       +   MP + D+  W S++G 
Sbjct: 461 YACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGG 499



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 119/257 (46%), Gaps = 8/257 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  +++     D  + + L+++Y + G L  A  +FD+M DR+ VSW  ++     
Sbjct: 239 GKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFE 298

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   E   +F++++++G   N Y    VL AC +        G +VH  ++ +      
Sbjct: 299 DGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAE--HLGKEVHGYMMHAGYDPGS 356

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
              + L+ MY  C  +T  ARR+F E+   DL+SW S+I  Y+Q G        F  + +
Sbjct: 357 FAISALVHMYSKC-GNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQ 415

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G     KP++ T+  +++A   + L     L+   ++ +K GL+      + ++   AR
Sbjct: 416 SG----TKPDQVTYVGVLSACTHAGLVDKG-LEYFHSIKEKHGLMHTADHYACVIDLLAR 470

Query: 244 LGNFYYARKIFEQMIQK 260
            G F  A  I + M  K
Sbjct: 471 SGRFKEAENIIDNMPVK 487


>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
 gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
          Length = 615

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 227/591 (38%), Positives = 346/591 (58%), Gaps = 11/591 (1%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           + + G       L   +  CA    +  G++IH       LD    +SN L+ +Y   G 
Sbjct: 32  LEQSGAAGGTGDLEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGS 91

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT---FIN 464
           L    +VF  M   +  SW  ++  F  S   V EA++ +  M + G  P+ V    FI+
Sbjct: 92  LVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGV-EAIQLFHRMCQEGELPDRVALLKFID 150

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
              AA + S G+   ++H+      + ++    NA+++ YGKCG + +   +F RM E+ 
Sbjct: 151 SCGAAKALSQGR---EIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEK- 206

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
           + +SW++MI+ +  NEL  +A+     M Q G  LD  T+ +VL A  SV  LE G  +H
Sbjct: 207 NVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALH 266

Query: 585 ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGD 644
              V A L+  +V+G+ LV+MY KCG  D A   FD M  +NV SWN+M++ Y ++G   
Sbjct: 267 VRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSR 326

Query: 645 KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCM 704
           +AL LF  M L+G  P+ +TFV +L  CSH+G   +   HF  M Q +G+ P+   F C+
Sbjct: 327 EALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCL 386

Query: 705 VDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ 764
           +D+LGR+G+L++ EE I  MP+  ++++W ++L AC     +  +   +AA   F+ EP+
Sbjct: 387 IDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCAC--VTHKDEDRAARAAEEAFQREPR 444

Query: 765 NAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPE 824
            A  Y++L+N+YA+  KW++ AK RK M++A V+K+AG SW+ +   VH FVAGD  HP+
Sbjct: 445 CAAAYIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPD 504

Query: 825 KDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKL 883
           K  I++ L+ L  +MR  GY P  K  +  +E E K++++ YHSEK+AVAF + +   + 
Sbjct: 505 KSRIFKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPPRT 564

Query: 884 PIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           P+ I+KNLRVC DCHSA KFIS + GR I +RDSNRFHHF+ G+CSCGDYW
Sbjct: 565 PLCIVKNLRVCSDCHSAIKFISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 201/392 (51%), Gaps = 15/392 (3%)

Query: 254 FEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
            EQ+I++       L EGRR    +H ++    L     + N LV+MY KCG++ +++ V
Sbjct: 44  LEQLIRR-CAGAKALEEGRR----IHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRV 98

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           F  M  K+  SW  +++G  Q+G   EAI  F  M ++G +    +L+  + SC +   +
Sbjct: 99  FDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKAL 158

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
             G++IH      G+DSD+  +NA++++Y   G +     VF  MPE + +SW+++I AF
Sbjct: 159 SQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAF 218

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE 493
             +E L  EA+ ++  M++ G   + +T++++L A +S    +LG  +H +++   +   
Sbjct: 219 CQNE-LADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTS 277

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM 553
             + N L++ YGKCG  DD   +F  M E ++ VSWN+M++ Y  N    +A+ L   M 
Sbjct: 278 IVVGNTLVNMYGKCGSPDDARDVFDSMVE-KNVVSWNAMLAAYGQNGRSREALALFDSMD 336

Query: 554 QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV----VIGSALVDMYSKC 609
             G R +  TF T+L  C+     +  +  H   +R   +F +    V    L+DM  + 
Sbjct: 337 LEGVRPNDITFVTILYCCSHSGKFKDAVS-HFVEMRQ--DFGITPREVHFGCLIDMLGRS 393

Query: 610 GRIDYASRFFDLMPVR-NVYSWNSMISGYARH 640
           G+++ A      MPV  +   W S++     H
Sbjct: 394 GKLEEAEELIQAMPVPADAVLWTSLLCACVTH 425



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 164/341 (48%), Gaps = 14/341 (4%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRRKGKEVH 279
           +++  + L++GF + G    A ++F +M Q+            +   G  +   +G+E+H
Sbjct: 106 NVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIH 165

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
                 G+   +   N ++NMY KCG+I ++ +VF  M  K+ +SW+TMI+   QN   +
Sbjct: 166 SAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELAD 225

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           EA++ F  M+++G+     + +S L +  S+G + LG+ +H   +  GLD+ + V N L+
Sbjct: 226 EALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLV 285

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
           ++Y   G       VF  M E + VSWN+++ A+  +     EA+  +  M   G  PN 
Sbjct: 286 NMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQN-GRSREALALFDSMDLEGVRPND 344

Query: 460 VTFINILAAASSFSMGK--LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           +TF+ IL   S     K  + H V  +   + +         L+   G+ G++++ E++ 
Sbjct: 345 ITFVTILYCCSHSGKFKDAVSHFVEMRQ-DFGITPREVHFGCLIDMLGRSGKLEEAEELI 403

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
             M    D V W S++   + ++   +A        QR  R
Sbjct: 404 QAMPVPADAVLWTSLLCACVTHKDEDRAARAAEEAFQREPR 444



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 164/337 (48%), Gaps = 46/337 (13%)

Query: 21  FLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRA 80
           FL N L+++Y + G L  A ++FD M  +N  SW  +++G+   G   EA ++F  M + 
Sbjct: 77  FLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQE 136

Query: 81  GFLLNRYALGSVLRACQECGPS-GFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
           G L +R AL   L+    CG +     G ++H          D + +N +I MYG C  S
Sbjct: 137 GELPDRVAL---LKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKC-GS 192

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
              A  +F  +  +++ISW+++I+ + Q          F  MQ+EG    ++ +  T+ S
Sbjct: 193 IGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEG----MELDRITYVS 248

Query: 200 LITAAYSSVLSGSYLLQQILAM-VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           ++  AY+SV  G+  L + L + +  AGL + + VG+ LV+ + + G+   AR +F+ M+
Sbjct: 249 VLD-AYTSV--GALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMV 305

Query: 259 QKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM- 317
           +KNVVS N ++                               Y + G   ++ ++F  M 
Sbjct: 306 EKNVVSWNAMLAA-----------------------------YGQNGRSREALALFDSMD 336

Query: 318 ---IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
              +  + +++ T++     +G +++A+ +F  MR+D
Sbjct: 337 LEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQD 373



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 117/245 (47%), Gaps = 12/245 (4%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G   D+   N +IN+Y + G +  A  +F  MP++N +SW+ +++ +    +++EA   F
Sbjct: 172 GMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFF 231

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
           K M + G  L+R    SVL A    G    + G  +H  ++ +      +V N L+ MYG
Sbjct: 232 KLMQQEGMELDRITYVSVLDAYTSVG--ALELGKALHVRIVYAGLDTSIVVGNTLVNMYG 289

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
            C  S D AR +F+ +  ++++SWN++++ Y Q G +     LF  M  EG R    PN+
Sbjct: 290 KC-GSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVR----PND 344

Query: 195 YTFGSLITAAYSSVLSGSY--LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK 252
            TF   +T  Y    SG +   +   + M +  G+         L+    R G    A +
Sbjct: 345 ITF---VTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEE 401

Query: 253 IFEQM 257
           + + M
Sbjct: 402 LIQAM 406



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H++I+  G    + + NTL+N+Y + G    A  +FD M ++N VSW  +++ Y   
Sbjct: 263 KALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQN 322

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G S EA  +F  M   G   N     ++L  C   G
Sbjct: 323 GRSREALALFDSMDLEGVRPNDITFVTILYCCSHSG 358


>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Brachypodium distachyon]
          Length = 707

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 248/712 (34%), Positives = 393/712 (55%), Gaps = 36/712 (5%)

Query: 251 RKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDS 310
           RK+   M++ +  S          G ++HG L++ G      +GN L++MYAKCG +  +
Sbjct: 4   RKMIADMLRASAAS-----SAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMA 58

Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCAS 369
             VF  M  ++ VSW  ++ G  ++G   E +    AMR    ++ N F+L ++L +C  
Sbjct: 59  GEVFGGMPERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGV 118

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           +G +  G  IHG  ++ G +    V+N+L+ LY+  G +    +VF      + V+WN++
Sbjct: 119 VGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAM 178

Query: 430 IGAFADS-EALVSEAVKYYLDMRRA---GWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           I  +A +     S  V   +  RR       P+  TF ++L A  S    + G QVHA +
Sbjct: 179 ISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAM 238

Query: 486 IKYNV--ANETTIENALLSCYGKCG-EMDDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
           +   V  A+   +  ALL  Y KC   +    ++F R+ E+++ + W ++I G+     +
Sbjct: 239 VIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRL-EQKNAIQWTTVIVGHAQEGQV 297

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
            +AM L       G R D    ++V+   A  A +E+G +VH   V+     DV + ++L
Sbjct: 298 KEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSL 357

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           +DMY KCG  D A+R F  +P RNV SW +MI+G  +HGHG +A+ +F +M+ +G  PD 
Sbjct: 358 IDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDE 417

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFIN 722
           V ++ +LSACSH+GLV+E  ++F ++     L P+ E ++CMVDLLGRAGEL + ++ + 
Sbjct: 418 VAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVA 477

Query: 723 KMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKW 782
            MP+ P   +W+T+L A CR + +   +GR+A   L  ++  N VNYV+L+N++A  G W
Sbjct: 478 TMPMAPTVGVWQTLLSA-CRVH-KNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDW 535

Query: 783 EDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV-AGDESHPEKDLIYEKLKELNQKMRD 841
            +  + R AM+   ++K+ GCSWV +    H F   GD+SHP    I   L+++ + MR+
Sbjct: 536 RECQRVRGAMRRRGLRKQGGCSWVEVGKEAHFFYGGGDDSHPRAADICCVLRDVERTMRE 595

Query: 842 A-GYVP-----QTKFALFDLEPESKEDLVSYHSEKIAVAFVLT-------------RNSK 882
             GY P      ++ AL D++ ES+ + +  HSE++AV   L                 K
Sbjct: 596 RLGYSPGSSSSSSEAALHDVDEESRAESLRAHSERLAVGLWLLLHHDHDHGEGMGGTKRK 655

Query: 883 LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             IR+ KNLRVCGDCH  FK +S +VGR +V+RD+NRFH F DG CSC DYW
Sbjct: 656 EVIRVYKNLRVCGDCHEFFKGLSSVVGRVLVVRDANRFHRFEDGVCSCKDYW 707



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 195/412 (47%), Gaps = 49/412 (11%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +LK GF  D  L N LI++Y + G+L  A ++F  MP+RN VSW  ++ G+   G 
Sbjct: 26  LHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGD 85

Query: 67  SNEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
           + E  ++   M   +    N + L + L+AC   G      G+ +H   +++      +V
Sbjct: 86  ARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGD--MAAGVWIHGACVRAGFEGHHVV 143

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-QRE 184
           +N L+ +Y       D ARR+F+    R+L++WN++IS Y+  G       +F  M QR 
Sbjct: 144 ANSLVLLYSKGGRIGD-ARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRR 202

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK----------AGLLSDLYVG 234
                 +P+E+TF SL+ A   S+ +     Q   AMV +          AG L D+YV 
Sbjct: 203 QEEEDHQPDEFTFASLLKAC-GSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVK 261

Query: 235 -----------------------SALVSGFARLGNFYYARKIFEQM----------IQKN 261
                                  + ++ G A+ G    A ++F +           +  +
Sbjct: 262 CRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSS 321

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
           VV +        +G++VH Y +++     V+V N L++MY KCG  D++   FR +  ++
Sbjct: 322 VVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARN 381

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
            VSW  MI+GL ++G  +EAI  F  MR +G+     + ++ LS+C+  G +
Sbjct: 382 VVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLV 433



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 110/498 (22%), Positives = 211/498 (42%), Gaps = 57/498 (11%)

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
           R  +  +LRA      S    G Q+H  +LK     D ++ N LI MY  C E    A  
Sbjct: 4   RKMIADMLRA--SAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGE-LRMAGE 60

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--- 202
           +F  +  R+++SW +++  + + GD     +L   M+       + PNE+T  + +    
Sbjct: 61  VFGGMPERNVVSWTALMVGFLRHGDARECLRLLGAMRS---LSDVAPNEFTLSASLKACG 117

Query: 203 -------------AAYSSVLSGSYLLQQILAMV-KKAGLLSD------------LYVGSA 236
                        A   +   G +++   L ++  K G + D            L   +A
Sbjct: 118 VVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNA 177

Query: 237 LVSGFARLGNFYYARKIFEQMIQK---------------NVVSMNGLMEGRRKGKEVHGY 281
           ++SG+A  G+   +  +F +M Q+               +++   G +   R+G +VH  
Sbjct: 178 MISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAA 237

Query: 282 LIRSGLFDM--VAVGNGLVNMYAKCGT-IDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           ++  G+       +   L++MY KC   +  +  VF  +  K+++ W T+I G  Q G  
Sbjct: 238 MVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQV 297

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           +EA+  F      G+ +    L S +   A    +  G+Q+H   +K     DVSV+N+L
Sbjct: 298 KEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSL 357

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           + +Y   G      + F  +P  + VSW ++I           EA+  + +MR  G  P+
Sbjct: 358 IDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLG-KHGHGQEAIHMFEEMRAEGVEPD 416

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKI 516
            V ++ +L+A S   + +   + +   I+++       E+   ++   G+ GE+ + + +
Sbjct: 417 EVAYLALLSACSHSGLVEECRR-YFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDL 475

Query: 517 FARMSERRDEVSWNSMIS 534
            A M        W +++S
Sbjct: 476 VATMPMAPTVGVWQTLLS 493


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/661 (36%), Positives = 371/661 (56%), Gaps = 46/661 (6%)

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           SVF  +   + + WNTM  G   +     A+  +  M   GL+ ++++    L SCA L 
Sbjct: 18  SVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLK 77

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLY----------------------------- 402
               G QIHG  LKLG + D+ V  +L+S+Y                             
Sbjct: 78  ASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVT 137

Query: 403 --ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
             A  GY+     +F  +P  D VSWN++I  + ++     EA++ + +M +    P+  
Sbjct: 138 GYASRGYIESARNMFDEIPVKDVVSWNAMISGYVET-GNYKEALELFKEMMKTNVRPDES 196

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           T + +++A++     +LG QVH+ +  +   +   I NAL+  Y KCGEM+    +F  +
Sbjct: 197 TMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGL 256

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
           S  +D +SWN +I GY H  L  +A+ L   M++ G+  +  T  ++L ACA +  ++ G
Sbjct: 257 S-YKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIG 315

Query: 581 MEVHAC------GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
             +H        GV         + ++L+DMYSKCG I+ A + F+ M  +++ +WN+MI
Sbjct: 316 RWIHVYIDKRLKGVTNASS----LRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMI 371

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
            G+A HG  + A  +FS+M+ +   PD +TFVG+LSACSHAG++D G   F+SM+  Y +
Sbjct: 372 FGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKI 431

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
            P+LE + CM+DLLG +G   + EE I+ M + P+ +IW ++L AC        ELG K 
Sbjct: 432 TPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHG--NVELGEKF 489

Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
           A  LF++EP N  +YVLL+N+YA+ G+W +VA+ R  + +  +KK  GCS + +   VH 
Sbjct: 490 AQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHE 549

Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVA 874
           F+ GD+ HP    IY  L+E+   +++AG+VP T   L ++E E KE  + +HSEK+A+A
Sbjct: 550 FIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIA 609

Query: 875 F-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
           F +++   +  + I+KNLRVC +CH A K ISKI  REI+ RD  RFHHF DG CSC DY
Sbjct: 610 FGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDY 669

Query: 934 W 934
           W
Sbjct: 670 W 670



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 124/514 (24%), Positives = 230/514 (44%), Gaps = 64/514 (12%)

Query: 36  LASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRA 95
           L  A  +F+ + + N + W  +  G+        A K++  M+  G L N Y    +L++
Sbjct: 13  LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDL 155
           C +   S  K G+Q+H  VLK     D  V   LI+MY    E  + A ++F+    RD+
Sbjct: 73  CAKLKAS--KEGLQIHGHVLKLGYELDLYVHTSLISMYVQN-ERLEDAHKVFDRSSHRDV 129

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL 215
           +S+ ++++ Y+ RG   S   +F  +                                  
Sbjct: 130 VSYTALVTGYASRGYIESARNMFDEIP--------------------------------- 156

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV----------VSM 265
                       + D+   +A++SG+   GN+  A ++F++M++ NV          +S 
Sbjct: 157 ------------VKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISA 204

Query: 266 NGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
           +        G++VH ++   G    + + N L++ Y+KCG ++ +  +F  +  KD +SW
Sbjct: 205 SARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISW 264

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH---GE 382
           N +I G      Y+EA++ F  M R G   ++ +++S L +CA LG I +G+ IH    +
Sbjct: 265 NILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDK 324

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            LK G+ +  S+  +L+ +Y+  G +    +VF  M      +WN++I  FA      + 
Sbjct: 325 RLK-GVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFA-MHGRANA 382

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALL 501
           A   +  MR+    P+ +TF+ +L+A S   M  LG H   +    Y +  +      ++
Sbjct: 383 AFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMI 442

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
              G  G   + E++ + M+   D V W S++  
Sbjct: 443 DLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKA 476



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 163/348 (46%), Gaps = 32/348 (9%)

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           L   + VF  + E + + WN++    A S   VS A+K Y+ M   G  PN  TF  +L 
Sbjct: 13  LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVS-ALKLYVCMISLGLLPNSYTFPFLLK 71

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER---- 523
           + +     K G Q+H  V+K     +  +  +L+S Y +   ++D  K+F R S R    
Sbjct: 72  SCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVS 131

Query: 524 --------------------------RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ 557
                                     +D VSWN+MISGY+      +A+ L   MM+   
Sbjct: 132 YTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNV 191

Query: 558 RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
           R D  T  TV+SA A   ++E G +VH+         ++ I +AL+D YSKCG ++ A  
Sbjct: 192 RPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACG 251

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGL 677
            F  +  ++V SWN +I GY       +AL LF +M   G  P+ VT + +L AC+H G 
Sbjct: 252 LFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGA 311

Query: 678 VDEG-FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           +D G + H     ++ G+       + ++D+  + G+++   +  N M
Sbjct: 312 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM 359



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 136/604 (22%), Positives = 248/604 (41%), Gaps = 89/604 (14%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVR---------------------------- 32
           SK+    H  +LK G+  D+++  +LI++YV+                            
Sbjct: 79  SKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTG 138

Query: 33  ---VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYAL 89
               G + SA  +FDE+P ++ VSW  ++SGY   G   EA ++FKEM++     +   +
Sbjct: 139 YASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTM 198

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE-STDCARRIFE 148
            +V+ A    G    + G QVH  +       +  + N LI  Y  C E  T C   +F 
Sbjct: 199 VTVISASARSG--SIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACG--LFL 254

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA--YS 206
            +  +D+ISWN +I  Y+          LF  M R G      PN+ T  S++ A     
Sbjct: 255 GLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSG----ESPNDVTMLSILHACAHLG 310

Query: 207 SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN 266
           ++  G ++   I   +K  G+ +   + ++L+  +++ G+   A ++F  M+ K++ + N
Sbjct: 311 AIDIGRWIHVYIDKRLK--GVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWN 368

Query: 267 GL-----MEGRRKGK-EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
            +     M GR     ++   + ++ +        GL++  +  G +D  R +FR M   
Sbjct: 369 AMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHN 428

Query: 321 DSVS-----WNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
             ++     +  MI  L  +G ++EA  +++   M  DG++       S L +C   G +
Sbjct: 429 YKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVI-----WCSLLKACKMHGNV 483

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLKVFFLM--------PEHDQV 424
            LG++      K  ++ +   S  LLS +YA AG  +   ++  L+        P    +
Sbjct: 484 ELGEKFAQNLFK--IEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSI 541

Query: 425 SWNSVIGAFADSEALVSEAVKYY-------LDMRRAGWSPNGVTFINILAAASSFSMGKL 477
             +SV+  F   +       + Y       + ++ AG+ P+    +  +     F  G L
Sbjct: 542 EIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEM--EEEFKEGAL 599

Query: 478 GHQVHAQVIKYNV-----ANETTIENALLSCYGKCGEMDD-CEKIFARMSERRDEVSWNS 531
            H      I + +       + TI   L  C   C E      KI+ R    RD   ++ 
Sbjct: 600 RHHSEKLAIAFGLISTKPETKLTIVKNLRVCR-NCHEATKLISKIYKREIIARDRTRFHH 658

Query: 532 MISG 535
              G
Sbjct: 659 FRDG 662


>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 284/921 (30%), Positives = 459/921 (49%), Gaps = 89/921 (9%)

Query: 25  TLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY-THKGMSNEACKMFKEMVRAGFL 83
           +++  Y+  GD  SA+K+F     RN + W   +  + +  G S+E  ++FKE+   G  
Sbjct: 69  SMMRNYLEFGDFESATKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVK 128

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
            +  AL  VL+ C          GM+VH  +LK     D  +S  LI +Y  CL   D A
Sbjct: 129 FDSKALTVVLKIC--LALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCL-GIDRA 185

Query: 144 RRIFEEIETRDLISWNSII--SVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
            ++F+E   ++   WN+I+  ++ S+R +     +L  RMQ      S K  + T   L+
Sbjct: 186 NQVFDETPLQEDFLWNTIVMANLRSERWE--DALELSRRMQSA----SAKATDGTIVKLL 239

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
            A     L      +QI   V + G +S+  + +++VS ++R      AR +F+     N
Sbjct: 240 QAC--GKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHN 297

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM---- 317
           + S                              N +++ YA  G ++ +  +FR M    
Sbjct: 298 LASW-----------------------------NSIISSYAVNGCLNGAWDLFREMESSS 328

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
           I  D ++WN+++SG    G YE  + N  +++  G    + S+ S L +   LG+  LG+
Sbjct: 329 IKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGK 388

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           +IHG  ++  L+ DV V  +L+ +Y     L +   VF      +  +WNS+I  +   +
Sbjct: 389 EIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYT-YK 447

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
            L   A K  + M+  G   + VT+                                   
Sbjct: 448 GLFDNAEKLLIQMKEEGIKADLVTW----------------------------------- 472

Query: 498 NALLSCYGKCGEMDDCEKIFARMSE---RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
           N+L+S Y   G  ++   +  R+       + VSW +MISG   NE    A+     M +
Sbjct: 473 NSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQE 532

Query: 555 RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
              + +  T +T+L ACA  + L++G E+H   ++     D+ I +AL+DMYSK G++  
Sbjct: 533 ENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKV 592

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
           A   F  +  + +  WN M+ GYA +GHG++  TLF  M   G  PD +TF  +LS C +
Sbjct: 593 AHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKN 652

Query: 675 AGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWR 734
           +GLV +G+K+F SM   Y + P +E +SCMVDLLG+AG LD+  +FI+ MP   ++ IW 
Sbjct: 653 SGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASIWG 712

Query: 735 TVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKE 794
            VL A CR + +  ++   AA  LF +EP N+ NYVL+ N+Y++  +W DV + +++M  
Sbjct: 713 AVLAA-CRLH-KDIKIAEIAARNLFRLEPYNSANYVLMMNIYSTFERWGDVERLKESMTA 770

Query: 795 AEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFD 854
             VK     SW+ ++  +HVF    +SHPE+  IY  L +L  +++  GYVP T     +
Sbjct: 771 MGVKIPNVWSWIQVRQTIHVFSTEGKSHPEEGEIYFDLYQLISEIKKLGYVPDTNCVHQN 830

Query: 855 LEPESKEDLVSYHSEKIAVAFVLTR-NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIV 913
           ++   KE ++  H+EK+A+ + L +     PIR++KN R+C DCH+A K+IS    REI 
Sbjct: 831 IDDSEKEKVLLSHTEKLAMTYGLMKIKGGTPIRVVKNTRICQDCHTAAKYISLARNREIF 890

Query: 914 LRDSNRFHHFNDGKCSCGDYW 934
           LRD  RFHHF +G+CSC D W
Sbjct: 891 LRDGGRFHHFMNGECSCNDRW 911



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 141/574 (24%), Positives = 257/574 (44%), Gaps = 56/574 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +LK GF  DV L   LIN+Y +   +  A+++FDE P +    W  IV         
Sbjct: 154 HACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERW 213

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGP-SGFKFGMQVHCLVLKSNQTFDGLVS 126
            +A ++ + M  A     +   G++++  Q CG       G Q+H  V++  +  +  + 
Sbjct: 214 EDALELSRRMQSAS---AKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSIC 270

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N +++MY S     + AR +F+  E  +L SWNSIIS Y+  G     + LF  M+    
Sbjct: 271 NSIVSMY-SRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESS-- 327

Query: 187 RYSLKPNEYTFGSL-------------------------------ITAAYSSVLSGSY-- 213
             S+KP+  T+ SL                               IT+A  +V+   Y  
Sbjct: 328 --SIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFN 385

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-R 272
           L ++I   + ++ L  D+YV ++LV  + +      A  +F     KN+ + N L+ G  
Sbjct: 386 LGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYT 445

Query: 273 RKG--KEVHGYLIR---SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM----IGKDSV 323
            KG        LI+    G+   +   N LV+ Y+  G  +++ +V   +    +  + V
Sbjct: 446 YKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVV 505

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SW  MISG  QN  Y +A+  F  M+ + +  ++ ++ + L +CA    +  G++IH   
Sbjct: 506 SWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCFS 565

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           +K G   D+ ++ AL+ +Y+  G L    +VF  + E     WN ++  +A       E 
Sbjct: 566 MKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYA-IYGHGEEV 624

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALL 501
              + +M + G  P+ +TF  +L+   +  +   G + +   +K + +   TIE+   ++
Sbjct: 625 FTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWK-YFDSMKTDYSINPTIEHYSCMV 683

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
              GK G +D+       M ++ D   W ++++ 
Sbjct: 684 DLLGKAGFLDEALDFIHAMPQKADASIWGAVLAA 717



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 147/589 (24%), Positives = 258/589 (43%), Gaps = 57/589 (9%)

Query: 276 KEVHGYLIR-SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           +E+H  +I+     ++V +   ++  Y + G  + +  VF     ++ + WN+ +     
Sbjct: 48  RELHAQMIKMPKKGNLVTMDGSMMRNYLEFGDFESATKVFFVGFARNYLLWNSFLEEFAS 107

Query: 335 NGCYEEAIMN-FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            G     I+  F  +   G+   + +L   L  C +L  + LG ++H   LK G   DV 
Sbjct: 108 FGGDSHEILEVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRGFQVDVH 167

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           +S AL++LY     + R  +VF   P  +   WN+++ A   SE    +A++    M+ A
Sbjct: 168 LSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERW-EDALELSRRMQSA 226

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
                  T + +L A         G Q+H  VI++   + T+I N+++S Y +   ++  
Sbjct: 227 SAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELA 286

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS---- 569
             +F   +E  +  SWNS+IS Y  N  L  A +L   M     + D  T+ ++LS    
Sbjct: 287 RAVFDS-TEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLL 345

Query: 570 ----------------------ACASVATLER---------GMEVHACGVRACLEFDVVI 598
                                 +C+  + L+          G E+H   +R+ LE+DV +
Sbjct: 346 QGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYV 405

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            ++LVDMY K   ++ A   F     +N+ +WNS+ISGY   G  D A  L  QMK +G 
Sbjct: 406 CTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGI 465

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
             D VT+  ++S  S +G  +E       +  + GL P +  ++ M+    +        
Sbjct: 466 KADLVTWNSLVSGYSMSGCSEEALAVINRIKSL-GLTPNVVSWTAMISGCCQNENYTDAL 524

Query: 719 EFINKMP---ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLA-- 773
           +F ++M    + PNS    T+L AC   +     L +      F M+    V+ + +A  
Sbjct: 525 QFFSQMQEENVKPNSTTISTLLRACAGPSL----LKKGEEIHCFSMK-HGFVDDIYIATA 579

Query: 774 --NMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
             +MY+ GGK +   +  + +KE    K   C W  M  G  ++  G+E
Sbjct: 580 LIDMYSKGGKLKVAHEVFRNIKE----KTLPC-WNCMMMGYAIYGHGEE 623



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 218/480 (45%), Gaps = 62/480 (12%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H  +++ G   +  +CN+++++Y R   L  A  +FD   D N  SW  I+S Y 
Sbjct: 250 EGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYA 309

Query: 63  HKGMSNEACKMFKEM-------------------------------VR----AGFLLNRY 87
             G  N A  +F+EM                               +R    AGF  +  
Sbjct: 310 VNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSC 369

Query: 88  ALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY--GSCLESTDCARR 145
           ++ S L+A  E G   F  G ++H  +++S   +D  V   L+ MY    CLE    A  
Sbjct: 370 SITSALQAVIELGY--FNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEK---AEV 424

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           +F   + +++ +WNS+IS Y+ +G   +  KL  +M+ EG +  L     T+ SL++   
Sbjct: 425 VFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADL----VTWNSLVSGYS 480

Query: 206 SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV--- 262
            S  S   L   ++  +K  GL  ++   +A++SG  +  N+  A + F QM ++NV   
Sbjct: 481 MSGCSEEAL--AVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPN 538

Query: 263 -VSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
             +++ L+         +KG+E+H + ++ G  D + +   L++MY+K G +  +  VFR
Sbjct: 539 STTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFR 598

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            +  K    WN M+ G    G  EE    F  M + G+     +  + LS C + G +M 
Sbjct: 599 NIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMD 658

Query: 376 GQQIHGEGLKL--GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
           G + + + +K    ++  +   + ++ L   AG+L   L     MP+    S W +V+ A
Sbjct: 659 GWK-YFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASIWGAVLAA 717



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 47/99 (47%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H   +KHGF  D+++   LI++Y + G L  A ++F  + ++    W C++ GY
Sbjct: 556 KKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGY 615

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   E   +F  M + G   +     ++L  C+  G
Sbjct: 616 AIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSG 654


>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Glycine max]
          Length = 586

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 227/590 (38%), Positives = 352/590 (59%), Gaps = 13/590 (2%)

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
           MS +  L   L+ C+    +  G+Q+HG   KLG D    V N+++ +Y+  G +    +
Sbjct: 1   MSESRLLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAAR 60

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           VF  +P  + +SWN++I  + + E    EA+  + +MR  G  P+G T+ + L A S   
Sbjct: 61  VFNTLPVRNVISWNAMIAGYTN-ERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCAD 119

Query: 474 MGKLGHQVHAQVIKYNVA--NETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
               G Q+HA +I++      ++ +  AL+  Y KC  M +  K+F R+ E+   +SW++
Sbjct: 120 AAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEK-SVMSWST 178

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC 591
           +I GY   + L +AM+L   + +   R+D F  ++++   A  A LE+G ++HA  ++  
Sbjct: 179 LILGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVP 238

Query: 592 LEF-DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
               ++ + ++++DMY KCG    A   F  M  RNV SW  MI+GY +HG G+KA+ LF
Sbjct: 239 YGLLEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELF 298

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
           ++M+ +G  PD VT++ VLSACSH+GL+ EG K+F  +     + P++E ++CMVDLLGR
Sbjct: 299 NEMQENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGR 358

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
            G L + +  I KMP+ PN  IW+T+L + CR +    E+G++   +L   E  N  NYV
Sbjct: 359 GGRLKEAKNLIEKMPLKPNVGIWQTLL-SVCRMHG-DVEMGKQVGEILLRREGNNPANYV 416

Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
           +++NMYA  G W++  K R+ +K   +KKEAG SWV M   +H+F  GD  HP  + I+E
Sbjct: 417 MVSNMYAHAGYWKESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHE 476

Query: 831 KLKELNQKMRDA-GYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNS-KLP---- 884
            LKE+ +++++  GYV    F+L D+E ESK + +  HSEK+A+  VL R   KL     
Sbjct: 477 VLKEMEKRVKEEMGYVHSINFSLHDVEEESKMESLRVHSEKLAIGLVLVRRGLKLKGERV 536

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           IRI KNLRVCGDCH+  K +SK++    V+RD+NRFH F +G CSCGDYW
Sbjct: 537 IRIFKNLRVCGDCHAFIKGLSKVLKIAFVVRDANRFHRFENGLCSCGDYW 586



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 213/420 (50%), Gaps = 18/420 (4%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +GK+VHG + + G   +  VGN +++MY+KCG + ++  VF  +  ++ +SWN MI+G  
Sbjct: 22  QGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNVISWNAMIAGYT 81

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD--SD 391
                EEA+  F  MR  G +   ++  S+L +C+       G QIH   ++ G    + 
Sbjct: 82  NERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQ 141

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
            +V+ AL+ LY     ++   KVF  + E   +SW+++I  +A  + L  EA+  + ++R
Sbjct: 142 SAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNL-KEAMDLFRELR 200

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTIENALLSCYGKCGE 509
            +    +G    +I+   + F++ + G Q+HA  IK  Y +  E ++ N++L  Y KCG 
Sbjct: 201 ESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLL-EMSVANSVLDMYMKCGL 259

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
             + + +F  M E R+ VSW  MI+GY  + +  KA+ L   M + G   D  T+  VLS
Sbjct: 260 TVEADALFREMLE-RNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLS 318

Query: 570 ACASVATLERGMEVHA--CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-N 626
           AC+    ++ G +  +  C  +  ++  V   + +VD+  + GR+  A    + MP++ N
Sbjct: 319 ACSHSGLIKEGKKYFSILCSNQK-IKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPN 377

Query: 627 VYSWNSMISGYARHGH---GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
           V  W +++S    HG    G +   +  + + + P      +V V +  +HAG   E  K
Sbjct: 378 VGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNP----ANYVMVSNMYAHAGYWKESEK 433



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/431 (23%), Positives = 200/431 (46%), Gaps = 37/431 (8%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
             K  H  + K GF     + N++I++Y + G +  A+++F+ +P RN +SW  +++GYT
Sbjct: 22  QGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNVISWNAMIAGYT 81

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF- 121
           ++    EA  +F+EM   G + + Y   S L+AC     +G   GMQ+H  +++    + 
Sbjct: 82  NERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAG--EGMQIHAALIRHGFPYL 139

Query: 122 -DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
               V+  L+ +Y  C    + AR++F+ IE + ++SW+++I  Y+Q  +      LF  
Sbjct: 140 AQSAVAGALVDLYVKCRRMAE-ARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLF-- 196

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAM----VKKAGLLSDLYVGSA 236
             RE     L+ + +     + ++   V +   LL+Q   M    +K    L ++ V ++
Sbjct: 197 --RE-----LRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANS 249

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------RKGKEVHGYLIRSGLFDM 290
           ++  + + G    A  +F +M+++NVVS   ++ G        K  E+   +  +G+   
Sbjct: 250 VLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPD 309

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNF 345
                 +++  +  G I + +  F  +     +      +  M+  L + G  +EA    
Sbjct: 310 SVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLI 369

Query: 346 CAMRRDGLMSSNFSLIST-LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYA 403
             M     +  N  +  T LS C   G + +G+Q+ GE L L  + +   +  ++S +YA
Sbjct: 370 EKMP----LKPNVGIWQTLLSVCRMHGDVEMGKQV-GEIL-LRREGNNPANYVMVSNMYA 423

Query: 404 DAGYLSRCLKV 414
            AGY     K+
Sbjct: 424 HAGYWKESEKI 434


>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
          Length = 656

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/661 (36%), Positives = 360/661 (54%), Gaps = 40/661 (6%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK VH  ++R+  FD+V   N L+ +Y KCG +  +R VF  M  ++ VS N ++SG   
Sbjct: 35  GKAVHARVVRAARFDVVQYNN-LIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYAS 93

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +G + +A+     +R      + + L S +++ A +    +G+Q HG  +K GL     V
Sbjct: 94  SGRHRDAL---ALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYV 150

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            +A+L +Y    ++                                 EAVKY        
Sbjct: 151 CSAVLHMYCQCAHMD--------------------------------EAVKYSKKHGEKC 178

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
            +        +L   +S     LG QVH Q +K  +     + +AL+  YGKC    +  
Sbjct: 179 RAMGSCVICRVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEAN 238

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           ++F  + E+ + VSW ++++ Y  NEL   A+ L   M   G R + FT+A  L++CA +
Sbjct: 239 RVFEVLPEK-NIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGL 297

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
           ATL+ G  + AC ++      + + +AL++MYSK G ++ A R F  MP R+V SWNS+I
Sbjct: 298 ATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSII 357

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
            GYA HG   +A+  F  M     +P +VTF+GVLSAC+  GLVDEGF +   M +  G+
Sbjct: 358 IGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGV 417

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
            P  E ++CMV LL R G LD+ E FI    I  + + WR++L +C     R   LG + 
Sbjct: 418 KPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSC--QVYRNYGLGHRV 475

Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
           A  +F+++P++   YVLL+NMYA   +W+ V K R+ M+E  V+KE G SW+ +   VHV
Sbjct: 476 AEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHV 535

Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVA 874
           F + D+ HP  + I +KL+EL  K++  GYVP    AL D+E E KE+ + YHSEK+A+A
Sbjct: 536 FTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALA 595

Query: 875 FVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
           F L R  K   IRIMKN+R+C DCH A K IS   GR IV+RD+ RFH   DG CSC DY
Sbjct: 596 FGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSCDDY 655

Query: 934 W 934
           W
Sbjct: 656 W 656



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 205/442 (46%), Gaps = 23/442 (5%)

Query: 104 FKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS 163
              G  VH  V+++ + FD +  N LIA+Y  C      AR++F+ + +R+ +S N ++S
Sbjct: 32  LSLGKAVHARVVRAAR-FDVVQYNNLIALYVKC-GRLGLARQVFDAMPSRNPVSGNLLMS 89

Query: 164 VYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVK 223
            Y+  G       L  R+   G       NEY   S + A  ++ +    + +Q      
Sbjct: 90  GYASSGRHRDALALL-RVADFGL------NEYVLSSAVAA--TAHVRSYDMGRQCHGYAI 140

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRR 273
           KAGL    YV SA++  + +  +   A K  ++  +K           V+      +   
Sbjct: 141 KAGLAEHPYVCSAVLHMYCQCAHMDEAVKYSKKHGEKCRAMGSCVICRVLGHCASTKEVV 200

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
            G +VH   ++  L   V VG+ LV+MY KC    ++  VF  +  K+ VSW  +++   
Sbjct: 201 LGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYT 260

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           QN  +E+A+  F  M  +G+  + F+    L+SCA L  +  G  +    +K G    + 
Sbjct: 261 QNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLP 320

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V NAL+++Y+ +G +    +VF  MP  D VSWNS+I  +A       EA++ + DM  A
Sbjct: 321 VCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYA-HHGRAREAMEAFHDMLFA 379

Query: 454 GWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
              P+ VTFI +L+A +   +   G + ++  + +  V         ++    + G +D+
Sbjct: 380 EEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDE 439

Query: 513 CEKIFARMSERRDEVSWNSMIS 534
            E+         D V+W S++S
Sbjct: 440 AERFIESNCIGTDVVAWRSLLS 461



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 168/419 (40%), Gaps = 103/419 (24%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H ++++    +DV   N LI +YV+ G L  A ++FD MP RN VS   ++SGY   
Sbjct: 36  KAVHARVVR-AARFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASS 94

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   +A  + +    A F LN Y L S + A        +  G Q H   +K+       
Sbjct: 95  GRHRDALALLRV---ADFGLNEYVLSSAVAATAHV--RSYDMGRQCHGYAIKAGLAEHPY 149

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V + ++ MY  C                                               E
Sbjct: 150 VCSAVLHMYCQCAH-------------------------------------------MDE 166

Query: 185 GFRYSLKPNE--YTFGSLIT-------AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS 235
             +YS K  E     GS +        A+   V+ GS +  Q L    K  L  ++YVGS
Sbjct: 167 AVKYSKKHGEKCRAMGSCVICRVLGHCASTKEVVLGSQVHTQAL----KRRLELNVYVGS 222

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL---------------------MEGRR- 273
           ALV  + +    + A ++FE + +KN+VS   +                     MEG R 
Sbjct: 223 ALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRP 282

Query: 274 -------------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                               G  +    +++G + ++ V N L+NMY+K G+++D+R VF
Sbjct: 283 NEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVF 342

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
             M  +D VSWN++I G   +G   EA+  F  M     + S  + I  LS+CA LG +
Sbjct: 343 LSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLV 401



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 140/318 (44%), Gaps = 18/318 (5%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q LK     +V++ + L+++Y +      A+++F+ +P++N VSW  I++ YT   + 
Sbjct: 206 HTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELF 265

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            +A ++F +M   G   N +     L +C   G +  K G  +    +K+       V N
Sbjct: 266 EDALQLFLDMEMEGVRPNEFTYAVALNSCA--GLATLKNGNALGACTMKTGHWGLLPVCN 323

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY       D ARR+F  +  RD++SWNSII  Y+  G      + F  M    F 
Sbjct: 324 ALMNMYSKSGSVED-ARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDML---FA 379

Query: 188 YSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
             + P+  TF  +++A      V  G Y L     M+K+ G+       + +V    R+G
Sbjct: 380 EEV-PSYVTFIGVLSACAQLGLVDEGFYYLN---IMMKEVGVKPGKEHYTCMVGLLCRVG 435

Query: 246 NFYYARKIFE-QMIQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LVN 299
               A +  E   I  +VV+   L+   +  +    G+ +   +F +     G    L N
Sbjct: 436 RLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSN 495

Query: 300 MYAKCGTIDDSRSVFRFM 317
           MYAK    D    V R M
Sbjct: 496 MYAKANRWDGVVKVRRLM 513



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 42/74 (56%), Gaps = 1/74 (1%)

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           L  G  VHA  VRA   FDVV  + L+ +Y KCGR+  A + FD MP RN  S N ++SG
Sbjct: 32  LSLGKAVHARVVRAA-RFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSG 90

Query: 637 YARHGHGDKALTLF 650
           YA  G    AL L 
Sbjct: 91  YASSGRHRDALALL 104


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 267/879 (30%), Positives = 450/879 (51%), Gaps = 96/879 (10%)

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRA----CQECGP-SGFKFGMQVHCLVLKSNQTFD 122
           N+  ++F     +    N+  L + +R      QEC   +  K G Q H  ++ S    D
Sbjct: 18  NKTLRIFTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPD 77

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD------------ 170
             +SN L+ MY  C    + A ++FE++  RD+IS+N++IS Y+  G+            
Sbjct: 78  VYISNCLMKMYLRC-SHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTP 136

Query: 171 ----------------------TISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
                                 +I VF    R +  GF      ++ TF  ++ A   SV
Sbjct: 137 KRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGF------DQTTFAVVLKAC--SV 188

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
           L    L  Q+  ++ + G   D+  GSAL+  +A+      + KIF ++  KN V  + +
Sbjct: 189 LEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAI 248

Query: 269 MEG-----------------------------------------RRKGKEVHGYLIRSGL 287
           + G                                          + G ++H + ++   
Sbjct: 249 IAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDF 308

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
              + VG   ++MYAKCG++ D++ +F  +       +N +I G  +N    EA+  F  
Sbjct: 309 GSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQL 368

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           + + GL  +  SL    S+CAS+   + G+Q+H   +K  L S++ V+N++L +Y     
Sbjct: 369 LLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEA 428

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           LS    +F  M   D VSWN+VI A  +      E +  +  M R    P+  T+ ++L 
Sbjct: 429 LSEACCMFDEMERRDAVSWNAVIAAH-EQNGNEEETLNLFASMLRLRMEPDQFTYGSVLK 487

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
           A SS      G ++H ++IK  +  ++ +  AL+  Y KCG +++ +KI  R+ E++  V
Sbjct: 488 ACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRI-EQQTMV 546

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           SWN++I+G+   +    A +  + M++   + D+FT+A VL ACA++A++  G ++H   
Sbjct: 547 SWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQI 606

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
           ++  L  DV I S LVDMYSKCG +  ++  F+  P ++  +WN+MI GYA+HG G++AL
Sbjct: 607 IKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEAL 666

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDL 707
             F +M+L+   P+H TFV +L AC+H G +D+G  +F +M   YGL PQ+E +SCM+D+
Sbjct: 667 GYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDI 726

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNA 766
           +GR+G + +  + I +MP   +++IWRT+L  C    N    E+  KA N + ++EP+++
Sbjct: 727 IGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGN---IEIAEKATNAILQLEPEDS 783

Query: 767 VNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKD 826
              +LL+N+YA  G W  V++ RK M+  ++KKE GCSW+ +KD VH F+ G+++HP  +
Sbjct: 784 SACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYE 843

Query: 827 LIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVS 865
            IY+ L  L  +M+  GY+P   F L D E E  E   S
Sbjct: 844 EIYKILSVLLDEMKWIGYIPDIDF-LIDEESEEYEQKAS 881



 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 196/734 (26%), Positives = 341/734 (46%), Gaps = 95/734 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H +++  GF  DV++ N L+ +Y+R   L  A K+F++M  R+ +S+  ++SGY
Sbjct: 60  KPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGY 119

Query: 62  THKGMSNEACKMFKEMVR----------AGFLLN----------------------RYAL 89
              G  N A + F +  +          +GFL N                      +   
Sbjct: 120 ADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTF 179

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
             VL+AC      G   G+QVH L+++     D +  + L+ MY  C +  D + +IF E
Sbjct: 180 AVVLKACSVLEDGG--LGIQVHGLIVRMGFYKDVVTGSALLDMYAKC-KRLDDSLKIFSE 236

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
           I  ++ + W++II+   Q  + I   +LF  MQ+ G   S       F S   A  S++ 
Sbjct: 237 IPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRS--CAGLSALK 294

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE-------------- 255
            G+    Q+ A   K    SD+ VG+A +  +A+ G+   A++IF               
Sbjct: 295 VGT----QLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAII 350

Query: 256 ----------------QMIQK-----NVVSMNGL------MEGRRKGKEVHGYLIRSGLF 288
                           Q++ K     N +S++G       ++G   G+++H   ++S L 
Sbjct: 351 VGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLR 410

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
             + V N +++MY KC  + ++  +F  M  +D+VSWN +I+  +QNG  EE +  F +M
Sbjct: 411 SNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASM 470

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
            R  +    F+  S L +C+S   +  G +IH   +K GL  D  V  AL+ +Y   G +
Sbjct: 471 LRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMI 530

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFA---DSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
               K+   + +   VSWN++I  F     SE    +A  ++ +M +    P+  T+  +
Sbjct: 531 EEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSE----DAHSFFYEMLKMSVKPDNFTYAIV 586

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           L A ++ +   LG Q+H Q+IK  + ++  I + L+  Y KCG M D   +F + +  +D
Sbjct: 587 LDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEK-APNKD 645

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-VH 584
            V+WN+MI GY  + L  +A+     M     R +H TF ++L ACA +  +++G+   +
Sbjct: 646 FVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFN 705

Query: 585 ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGH- 642
           A      LE  +   S ++D+  + GRI  A +    MP   +   W +++S    HG+ 
Sbjct: 706 AMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNI 765

Query: 643 --GDKALTLFSQMK 654
              +KA     Q++
Sbjct: 766 EIAEKATNAILQLE 779



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 197/417 (47%), Gaps = 28/417 (6%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D +  H   +K     ++ + N+++++Y +   L+ A  +FDEM  R++VSW  +++ + 
Sbjct: 396 DGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHE 455

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G   E   +F  M+R     +++  GSVL+AC          GM++H  ++KS    D
Sbjct: 456 QNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACS--SQQALNSGMEIHNRIIKSGLGLD 513

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V   LI MY  C    + A++I + IE + ++SWN+II+ ++    +      F  M 
Sbjct: 514 SFVGGALIDMYCKC-GMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEM- 571

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
               + S+KP+ +T+  ++ A  +  L+   L +QI   + K  L SD+Y+ S LV  ++
Sbjct: 572 ---LKMSVKPDNFTYAIVLDACAN--LASVGLGKQIHGQIIKLELHSDVYITSTLVDMYS 626

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---GKEVHGYLIRSGLFDMVAVGNGLVN 299
           + GN   +  +FE+   K+ V+ N ++ G  +   G+E  GY  R  L ++       V+
Sbjct: 627 KCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVS 686

Query: 300 MYAKC---GTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNFCAM--R 349
           +   C   G ID     F  M+ +  +      ++ MI  + ++G   EA+     M   
Sbjct: 687 ILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFE 746

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
            D ++         LS C   G I + ++     L+L  + D S    L ++YADAG
Sbjct: 747 ADAVIWRTL-----LSICKIHGNIEIAEKATNAILQLEPE-DSSACILLSNIYADAG 797


>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
          Length = 798

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 255/710 (35%), Positives = 391/710 (55%), Gaps = 34/710 (4%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGLFDMV 291
           +A ++  AR GN   AR  FE M  +   S N L+ G    R      G   R    D+ 
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV-SWNTMISGLDQNGCYEEAIMNFCAMRR 350
           +    +  +  +  T+ D+ +    +    SV S+ +++ G  ++G   +AI  F  M  
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
              +S    L   L +    G +   +++  E      D DV    A+LS Y  AG ++ 
Sbjct: 141 RNHVSYTVLLGGLLDA----GRVNEARRLFDEMP----DRDVVAWTAMLSGYCQAGRITE 192

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEA--LVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
              +F  MP+ + VSW ++I  +A +    L  +  +   +     W+   V +I     
Sbjct: 193 ARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYI----- 247

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIE--NALLSCYGKCGEMDDCEKIFARMSERRDE 526
                  + GH   A  + +N   E  +   NA++  +G+ G +D  + +F +M ER D+
Sbjct: 248 -------QAGHVEDAAEL-FNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCER-DD 298

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
            +W++MI  Y  NE L +A++    M+ RG R ++ +  ++L+ CA++A L+ G EVHA 
Sbjct: 299 GTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAA 358

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            +R   + DV   SAL+ MY KCG +D A R F     +++  WNSMI+GYA+HG G++A
Sbjct: 359 MLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQA 418

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           L +F  M+L G  PD +T++G L+ACS+ G V EG + F SM+    + P  E +SCMVD
Sbjct: 419 LGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVD 478

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           LLGR+G +++  + I  MP+ P+++IW  ++GA CR + R  E+   AA  L E+EP NA
Sbjct: 479 LLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA-CRMH-RNAEIAEFAAKKLLELEPGNA 536

Query: 767 VNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE-SHPEK 825
             YVLL+++Y S G+WED +K RK +    + K  GCSW+     VH+F +GD  +HPE 
Sbjct: 537 GPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEH 596

Query: 826 DLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LP 884
             I   L++L+  + ++GY     F L D++ E K   + YHSE+ AVA+ L +  + +P
Sbjct: 597 AAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMP 656

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           IR+MKNLRVCGDCHSA K I+KI  REI+LRD+NRFHHF DG CSC DYW
Sbjct: 657 IRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 130/535 (24%), Positives = 233/535 (43%), Gaps = 71/535 (13%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM------ 77
           N  I    R G++  A   F+ MP R + S+  +++GY    + + A  +F+ M      
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 78  ----VRAGFLLNRYALGSVLRACQECG--PSGFKF-----GMQVHCLVLKSNQTFDGLVS 126
               + +G  L R  L     A       PS   F     G   H L+  + + F  +  
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 127 NVLIA---MYGSCLES--TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              ++   + G  L++   + ARR+F+E+  RD+++W +++S Y Q G       LF  M
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            +                                              ++   +A++SG+
Sbjct: 201 PKR---------------------------------------------NVVSWTAMISGY 215

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVH--GYLIRSGLFDMVAVGNGLVN 299
           A+ G    ARK+FE M ++N VS   ++ G  +   V     L  +     VA  N ++ 
Sbjct: 216 AQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMV 275

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
            + + G +D +++VF  M  +D  +W+ MI   +QN    EA+  F  M   G+  +  S
Sbjct: 276 GFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPS 335

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           +IS L+ CA+L  +  G+++H   L+   D DV   +AL+++Y   G L +  +VF    
Sbjct: 336 VISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFE 395

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             D V WNS+I  +A    L  +A+  + DMR AG SP+G+T+I  L A S     K G 
Sbjct: 396 PKDIVMWNSMITGYA-QHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGR 454

Query: 480 QV-HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           ++ ++  +  ++       + ++   G+ G +++   +   M    D V W +++
Sbjct: 455 EIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM 509



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 108/463 (23%), Positives = 191/463 (41%), Gaps = 105/463 (22%)

Query: 16  FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFK 75
           F   V    +L+  YVR G LA A +LF +MP+RN VS+  ++ G    G  NEA ++F 
Sbjct: 108 FPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFD 167

Query: 76  EMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS 135
           EM                                            D +    +++ Y  
Sbjct: 168 EM-----------------------------------------PDRDVVAWTAMLSGYCQ 186

Query: 136 CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
               T+ AR +F+E+  R+++SW ++IS Y+Q G+     KLF  M           NE 
Sbjct: 187 AGRITE-ARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER--------NEV 237

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS--ALVSGFARLGNFYYARKI 253
           +        ++++L G      +    +    + +  V +  A++ GF + G    A+ +
Sbjct: 238 S--------WTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTV 289

Query: 254 FEQMIQKNVVSMNGLMEGRRK--------------------------------------- 274
           FE+M +++  + + +++   +                                       
Sbjct: 290 FEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVL 349

Query: 275 --GKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
             G+EVH  ++R   FDM V   + L+ MY KCG +D ++ VF     KD V WN+MI+G
Sbjct: 350 DYGREVHAAMLRCS-FDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITG 408

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI-HGEGLKLGLDS 390
             Q+G  E+A+  F  MR  G+     + I  L++C+  G +  G++I +   +   +  
Sbjct: 409 YAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRP 468

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                + ++ L   +G +     +   MP E D V W +++GA
Sbjct: 469 GAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 46/93 (49%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +L+  F  DVF  + LI +Y++ G+L  A ++F     ++ V W  +++GY   G+ 
Sbjct: 356 HAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLG 415

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            +A  +F +M  AG   +       L AC   G
Sbjct: 416 EQALGIFHDMRLAGMSPDGITYIGALTACSYTG 448


>gi|302796918|ref|XP_002980220.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
 gi|300151836|gb|EFJ18480.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
          Length = 739

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 247/700 (35%), Positives = 379/700 (54%), Gaps = 55/700 (7%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           +E+H  +I  GL     +GN LV +Y K G +D + + F  +  K+  SW  +IS   QN
Sbjct: 54  EELHCRMIAQGLDADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVFSWTIVISAFAQN 113

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G + EA++ F  M R+G+ ++  +L + L  C+S+  +  G+ IHG    +    DV + 
Sbjct: 114 GHHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGR--VIAAKKDVVIG 171

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           NAL+++Y+  G L      F  M   D VSW ++I A ++     +EAV+ + +M     
Sbjct: 172 NALVNMYSKCGSLREARASFQEMVVRDVVSWTTMITALSEHGEW-NEAVEIFWEMVSENV 230

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN-------ETTIENALLSCYGKCG 508
           +PN ++ + +L A S+     LG +   +VI   +A+       +  + N L+  YG+CG
Sbjct: 231 APNEISCLAVLGACSN-----LGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGRCG 285

Query: 509 EMDDCEKIFARMSER-RDEVSWNSMISGYIHNELLPKAMNLVWFMMQR--GQRLDHFTFA 565
              D  ++F  +    R+ VSW SMI+ Y  NE     + L   M+QR   +++D   + 
Sbjct: 286 SPSDARRVFDSLQHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVAYL 345

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
            VL AC+S++ L+ G +VH   V A    ++ +  A+V+MY KCG +  A   FD M  R
Sbjct: 346 CVLEACSSLSALKVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMKAR 405

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
           N+ +WNSM+ GY +HGH  +AL LF    LDG LPD +TFV +L+ACSHAG+V  G  HF
Sbjct: 406 NMIAWNSMMGGYTQHGHPKRALQLFELACLDGVLPDEITFVTILTACSHAGMVKPGVWHF 465

Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNS----LIWRTVLGACC 741
            S+   +G+ P ++ + CMVD+LGRAG LD  E  + +MP   N     + W  +L +C 
Sbjct: 466 GSIRADFGMEPSVDHYVCMVDMLGRAGWLDAAERLVERMPAFSNPADEFVPWMALLASC- 524

Query: 742 RANCRKTELGRKAANMLFEME--------------------PQNAVNYVLLANMYASGGK 781
                K     K A  +  +                       +A   V+L+N+YA   K
Sbjct: 525 -----KVHTDVKRAARISSVLSAKKKKLLSSSSSGSGSWHLKNSAAPLVMLSNIYAQAKK 579

Query: 782 WEDVAKARKAMKEAEVK-----KEAGCSWVTMKDGVHVFVAGD-ESHPEKDLIYEKLKEL 835
           WE++   R  + E   K     ++ GCS++ ++  +H FVAG    HPE   I  ++K L
Sbjct: 580 WEEMTGVRNEITEEWSKGMITSRQRGCSFIEVEGAIHEFVAGKLHLHPEHKGIDSEMKRL 639

Query: 836 NQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR-NSKLPIRIMKNLRVC 894
            + ++ AGYVP T   + D+E   KE ++  HSE++A+AF L R  S   +R++ NLR+C
Sbjct: 640 EELIKSAGYVPDTSVVMHDVEEAEKEGVLHQHSERMAIAFGLMRGGSDTIVRVVNNLRIC 699

Query: 895 GDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            DCH+A K ISK VGREI++RD+ RFHHF  G+CSC DYW
Sbjct: 700 SDCHAAVKLISKTVGREILVRDTRRFHHFASGECSCQDYW 739



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/496 (24%), Positives = 222/496 (44%), Gaps = 65/496 (13%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H +++  G   D +L N L+ VY + G L  A   FD +  +N  SW  ++S +   G 
Sbjct: 56  LHCRMIAQGLDADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVFSWTIVISAFAQNGH 115

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA  +F++M R G   N   L +VL  C          G  +H  V+ + +  D ++ 
Sbjct: 116 HREALVLFRQMEREGVKANEVTLAAVLGICSSI--KDLAGGRSIHGRVIAAKK--DVVIG 171

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+ MY  C  S   AR  F+E+  RD++SW ++I+  S+ G+     ++F  M  E  
Sbjct: 172 NALVNMYSKC-GSLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFWEMVSE-- 228

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD--LYVGSALVSGFARL 244
             ++ PNE +  +++ A   S L     ++ I   +   GL  D  L V + L+  + R 
Sbjct: 229 --NVAPNEISCLAVLGAC--SNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGRC 284

Query: 245 GNFYYARKIF---------------------------------EQMIQKN---------- 261
           G+   AR++F                                 ++MIQ+           
Sbjct: 285 GSPSDARRVFDSLQHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVAY 344

Query: 262 --VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
             V+     +   + G++VH  ++ +G  D + +   +VNMY KCG++ ++R VF  M  
Sbjct: 345 LCVLEACSSLSALKVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMKA 404

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           ++ ++WN+M+ G  Q+G  + A+  F     DG++    + ++ L++C+  G +  G   
Sbjct: 405 RNMIAWNSMMGGYTQHGHPKRALQLFELACLDGVLPDEITFVTILTACSHAGMVKPGVWH 464

Query: 380 HGE-GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
            G      G++  V     ++ +   AG+L    ++   MP     ++++    F    A
Sbjct: 465 FGSIRADFGMEPSVDHYVCMVDMLGRAGWLDAAERLVERMP-----AFSNPADEFVPWMA 519

Query: 439 LVSEAVKYYLDMRRAG 454
           L++ + K + D++RA 
Sbjct: 520 LLA-SCKVHTDVKRAA 534



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 114/489 (23%), Positives = 224/489 (45%), Gaps = 69/489 (14%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR 168
           ++HC ++      D  + N L+ +YG      D A   F+ I  +++ SW  +IS ++Q 
Sbjct: 55  ELHCRMIAQGLDADTYLGNNLVRVYGK-FGGLDRAWAAFDRIAAKNVFSWTIVISAFAQN 113

Query: 169 GDTISVFKLFSRMQREGFRYSLKPNEYTFGSL--ITAAYSSVLSGSYLLQQILAMVKKAG 226
           G       LF +M+REG    +K NE T  ++  I ++   +  G  +  +++A  K   
Sbjct: 114 GHHREALVLFRQMEREG----VKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAAKK--- 166

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--------------- 271
              D+ +G+ALV+ +++ G+   AR  F++M+ ++VVS   ++                 
Sbjct: 167 ---DVVIGNALVNMYSKCGSLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFW 223

Query: 272 --------------------------RRKGKEVHGYLIRSGLF--DMVAVGNGLVNMYAK 303
                                     R + + +H ++   GL     + V N L++ Y +
Sbjct: 224 EMVSENVAPNEISCLAVLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGR 283

Query: 304 CGTIDDSRSVFRFM--IGKDSVSWNTMISGLDQNGCYEEAIMNFCAM--RRDGLMSSNFS 359
           CG+  D+R VF  +    +++VSW +MI+    N   +  +  +  M  R +       +
Sbjct: 284 CGSPSDARRVFDSLQHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVA 343

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
            +  L +C+SL  + +G+Q+H E +  G   ++ ++ A++++Y   G L    +VF  M 
Sbjct: 344 YLCVLEACSSLSALKVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMK 403

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             + ++WNS++G +         A++ +      G  P+ +TF+ IL A S   M K G 
Sbjct: 404 ARNMIAWNSMMGGYTQ-HGHPKRALQLFELACLDGVLPDEITFVTILTACSHAGMVKPG- 461

Query: 480 QVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARM---SERRDE-VSWNSMI 533
             H   I+ +   E ++++   ++   G+ G +D  E++  RM   S   DE V W +++
Sbjct: 462 VWHFGSIRADFGMEPSVDHYVCMVDMLGRAGWLDAAERLVERMPAFSNPADEFVPWMALL 521

Query: 534 -SGYIHNEL 541
            S  +H ++
Sbjct: 522 ASCKVHTDV 530



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 106/205 (51%), Gaps = 13/205 (6%)

Query: 5   KLFHLQILKHGFAYD--VFLCNTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVSG 60
           ++ H  I   G   D  + + NTLI+ Y R G  + A ++FD +    RN+VSWA +++ 
Sbjct: 254 RVIHEFIASGGLELDKKLVVANTLIHTYGRCGSPSDARRVFDSLQHSARNAVSWASMIAA 313

Query: 61  YTHKGMSNEACKMFKEMVR--AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
           YT    +    ++++EM++      ++  A   VL AC     S  K G QVH  ++ + 
Sbjct: 314 YTSNEQAKAGVELYQEMIQREESKKMDPVAYLCVLEACSSL--SALKVGRQVHEEIVAAG 371

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              +  ++  ++ MY  C    + AR +F+ ++ R++I+WNS++  Y+Q G      +LF
Sbjct: 372 FGDELPLAGAIVNMYCKCGSLVE-AREVFDGMKARNMIAWNSMMGGYTQHGHPKRALQLF 430

Query: 179 SRMQREGFRYSLKPNEYTFGSLITA 203
                +G    + P+E TF +++TA
Sbjct: 431 ELACLDG----VLPDEITFVTILTA 451



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 3/109 (2%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H +I+  GF  ++ L   ++N+Y + G L  A ++FD M  RN ++W  ++ GY
Sbjct: 358 KVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMKARNMIAWNSMMGGY 417

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG---PSGFKFG 107
           T  G    A ++F+     G L +     ++L AC   G   P  + FG
Sbjct: 418 TQHGHPKRALQLFELACLDGVLPDEITFVTILTACSHAGMVKPGVWHFG 466


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 247/700 (35%), Positives = 381/700 (54%), Gaps = 46/700 (6%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI----GKDSVSWNTMISG 331
           K++H  +I+SGL + +   + L+   A   + D S ++  F        +   WNT+I  
Sbjct: 42  KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRA 101

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
                    ++  F  M   GL  ++ +  S   SCA        +Q+H   LKL L   
Sbjct: 102 HSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLH 161

Query: 392 VSVSNALLSLYADAGYLSRCL-------------------------------KVFFLMPE 420
             V  +L+ +Y+  G L                                   ++F  +P 
Sbjct: 162 PHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPA 221

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            D VSWN++I  +  S     EA+  +  M+ A  SPN  T +++L+A       +LG  
Sbjct: 222 KDVVSWNAMIAGYVQS-GRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKW 280

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           + + V          + NAL+  Y KCGE+    K+F  M E +D + WN+MI GY H  
Sbjct: 281 IGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGM-EDKDVILWNTMIGGYCHLS 339

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE-----FD 595
           L  +A+ L   M++     +  TF  VL ACAS+  L+ G  VHA  +   L+      +
Sbjct: 340 LYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAY-IDKNLKGTGNVNN 398

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
           V + ++++ MY+KCG ++ A + F  M  R++ SWN+MISG A +GH ++AL LF +M  
Sbjct: 399 VSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMIN 458

Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD 715
           +G  PD +TFVGVLSAC+ AG V+ G ++F SM++ YG+ P+L+ + CM+DLL R+G+ D
Sbjct: 459 EGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFD 518

Query: 716 KIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANM 775
           + +  +  M + P+  IW ++L A CR +  + E G   A  LFE+EP+N+  YVLL+N+
Sbjct: 519 EAKVLMGNMEMEPDGAIWGSLLNA-CRIH-GQVEFGEYVAERLFELEPENSGAYVLLSNI 576

Query: 776 YASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKEL 835
           YA  G+W+DVAK R  + +  +KK  GC+ + +   VH F+ GD+ HP+ + I+  L E+
Sbjct: 577 YAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEV 636

Query: 836 NQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVC 894
           ++ + + G+VP T   L+D++ E KE  ++ HSEK+A+AF +++      IRI+KNLRVC
Sbjct: 637 DRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVC 696

Query: 895 GDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            +CHSA K ISKI  REI+ RD NRFHHF DG CSC D W
Sbjct: 697 RNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 160/582 (27%), Positives = 261/582 (44%), Gaps = 81/582 (13%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC--ARRIFEEI--ETRDLISWNSIISV 164
           Q+H L++KS    + L +   +  + +   S D   A  +F  I  +  ++  WN++I  
Sbjct: 43  QIHSLIIKSG-LHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRA 101

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
           +S      S   LFS+M   G    L PN +TF SL  +   S    ++  +Q+ A   K
Sbjct: 102 HSLTPTPTSSLHLFSQMLHSG----LYPNSHTFPSLFKSCAKS--KATHEAKQLHAHALK 155

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIR 284
             L    +V ++L+  ++++G   +AR +F++   ++ VS   L+ G             
Sbjct: 156 LALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITG------------- 202

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
                           Y   G +DD+R +F  +  KD VSWN MI+G  Q+G +EEA+  
Sbjct: 203 ----------------YVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALAC 246

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F  M+   +  +  +++S LS+C  L  + LG+ I       G   ++ + NAL+ +Y+ 
Sbjct: 247 FTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSK 306

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
            G +    K+F  M + D + WN++IG +    +L  EA+  +  M R   +PN VTF+ 
Sbjct: 307 CGEIGTARKLFDGMEDKDVILWNTMIGGYCHL-SLYEEALVLFEVMLRENVTPNDVTFLA 365

Query: 465 ILAAASSFSMGKLGHQVHAQVIKY-----NVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           +L A +S     LG  VHA + K      NV N  ++  +++  Y KCG ++  E++F  
Sbjct: 366 VLPACASLGALDLGKWVHAYIDKNLKGTGNV-NNVSLWTSIIVMYAKCGCVEVAEQVFRS 424

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           M   R   SWN+MISG   N    +A+ L   M+  G + D  TF  VLSAC     +E 
Sbjct: 425 MGS-RSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVEL 483

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G                         Y      DY      + P   +  +  MI   AR
Sbjct: 484 GHR-----------------------YFSSMNKDYG-----ISP--KLQHYGCMIDLLAR 513

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
            G  D+A  L   M+++   PD   +  +L+AC   G V+ G
Sbjct: 514 SGKFDEAKVLMGNMEME---PDGAIWGSLLNACRIHGQVEFG 552



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 124/509 (24%), Positives = 204/509 (40%), Gaps = 89/509 (17%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLIN--VYVRVGDLASASKLFDEMPDR--NSVSWACIVSG 60
           K  H  I+K G    +F  + LI         DL+ A  LF  +  +  N   W  ++  
Sbjct: 42  KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRA 101

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           ++       +  +F +M+ +G   N +   S+ ++C +   +      Q+H   LK    
Sbjct: 102 HSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKAT--HEAKQLHAHALKLALH 159

Query: 121 FDGLVSNVLIAMYGSCLE------------------------------STDCARRIFEEI 150
               V   LI MY    E                                D ARR+F+EI
Sbjct: 160 LHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEI 219

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLS 210
             +D++SWN++I+ Y Q G        F+RMQ       + PN+ T  S+++A     L 
Sbjct: 220 PAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEA----DVSPNQSTMVSVLSAC--GHLR 273

Query: 211 GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
              L + I + V+  G   +L + +ALV  +++ G    ARK+F+ M  K+V+  N ++ 
Sbjct: 274 SLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIG 333

Query: 271 G------------------RRK-----------------------GKEVHGYLIR----S 285
           G                  R                         GK VH Y+ +    +
Sbjct: 334 GYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGT 393

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
           G  + V++   ++ MYAKCG ++ +  VFR M  +   SWN MISGL  NG  E A+  F
Sbjct: 394 GNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLF 453

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSLYAD 404
             M  +G    + + +  LS+C   G++ LG +      K  G+   +     ++ L A 
Sbjct: 454 EEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLAR 513

Query: 405 AGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           +G       +   M  E D   W S++ A
Sbjct: 514 SGKFDEAKVLMGNMEMEPDGAIWGSLLNA 542



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 141/309 (45%), Gaps = 26/309 (8%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           GF  ++ L N L+++Y + G++ +A KLFD M D++ + W  ++ GY H  +  EA  +F
Sbjct: 289 GFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLF 348

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV-----L 129
           + M+R     N     +VL AC   G      G  VH  + K N    G V+NV     +
Sbjct: 349 EVMLRENVTPNDVTFLAVLPACASLG--ALDLGKWVHAYIDK-NLKGTGNVNNVSLWTSI 405

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           I MY  C    + A ++F  + +R L SWN++IS  +  G       LF  M  EGF   
Sbjct: 406 IVMYAKC-GCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGF--- 461

Query: 190 LKPNEYTFGSLITAAYSS---VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
            +P++ TF  +++A   +    L   Y      +M K  G+   L     ++   AR G 
Sbjct: 462 -QPDDITFVGVLSACTQAGFVELGHRYF----SSMNKDYGISPKLQHYGCMIDLLARSGK 516

Query: 247 FYYARKIFEQMIQKNVVSMNG--LMEGRRKGKEVHGYLIRSGLFDMVAVGNG----LVNM 300
           F  A+ +   M  +   ++ G  L   R  G+   G  +   LF++    +G    L N+
Sbjct: 517 FDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNI 576

Query: 301 YAKCGTIDD 309
           YA  G  DD
Sbjct: 577 YAGAGRWDD 585



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 190/416 (45%), Gaps = 38/416 (9%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D      LI  YV  G +  A +LFDE+P ++ VSW  +++GY   G   EA   F  M 
Sbjct: 192 DAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQ 251

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
            A    N+  + SVL AC        + G  +   V       +  + N L+ MY  C E
Sbjct: 252 EADVSPNQSTMVSVLSACGHL--RSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGE 309

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
               AR++F+ +E +D+I WN++I  Y           LF  M RE    ++ PN+ TF 
Sbjct: 310 -IGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRE----NVTPNDVTFL 364

Query: 199 SLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           +++ A  S  ++  G ++   I   +K  G ++++ + ++++  +A+ G    A ++F  
Sbjct: 365 AVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRS 424

Query: 257 MIQKNVVSMNGLMEGRRKGKEVHGYLIRS-GLF-DMVAVG--------NGLVNMYAKCGT 306
           M  +++ S N ++ G      ++G+  R+ GLF +M+  G         G+++   + G 
Sbjct: 425 MGSRSLASWNAMISGL----AMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGF 480

Query: 307 IDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFS 359
           ++     F  M     I      +  MI  L ++G ++EA  +M    M  DG +     
Sbjct: 481 VELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWG--- 537

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLKV 414
             S L++C   G +  G+ +  E L   L+ + S +  LLS +YA AG      K+
Sbjct: 538 --SLLNACRIHGQVEFGEYV-AERL-FELEPENSGAYVLLSNIYAGAGRWDDVAKI 589



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/314 (21%), Positives = 131/314 (41%), Gaps = 39/314 (12%)

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS--CYGKCGEMDDCEKIFARM 520
           +N+LA        K   Q+H+ +IK  + N    ++ L+         ++     +F  +
Sbjct: 29  LNLLAKCPDIPSLK---QIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSI 85

Query: 521 SERRDEV-SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
             +   +  WN++I  +        +++L   M+  G   +  TF ++  +CA       
Sbjct: 86  HHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHE 145

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
             ++HA  ++  L     + ++L+ MYS+ G + +A   FD   +R+  S+ ++I+GY  
Sbjct: 146 AKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVS 205

Query: 640 HGHGD-------------------------------KALTLFSQMKLDGPLPDHVTFVGV 668
            GH D                               +AL  F++M+     P+  T V V
Sbjct: 206 EGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSV 265

Query: 669 LSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITP 728
           LSAC H   ++ G K   S  +  G    L+  + +VD+  + GE+    +  + M    
Sbjct: 266 LSACGHLRSLELG-KWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGME-DK 323

Query: 729 NSLIWRTVLGACCR 742
           + ++W T++G  C 
Sbjct: 324 DVILWNTMIGGYCH 337


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 249/720 (34%), Positives = 391/720 (54%), Gaps = 22/720 (3%)

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKN----------VVSMNGLMEGRRKGKEV 278
            D ++ + ++ GFA  G    A   +  M++            VV     + G  +G+  
Sbjct: 70  PDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAA 129

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           HG +I+ GL   V   N LV  YAK G ++D+  VF  M  +D V+WN M+ G   NG  
Sbjct: 130 HGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLG 189

Query: 339 EEAIMNFCAMRRDGL--MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
             A+  F  M  D L     +  +I+ L++C      M G++IHG  ++ GL+ D+ V  
Sbjct: 190 SLALACFQEMH-DALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGT 248

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           +LL +Y   G ++    VF  MP    V+WN +IG +A +E    EA   ++ MR  G  
Sbjct: 249 SLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNER-PDEAFDCFMQMRAEGLQ 307

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
              VT IN+LAA +       G  VH  V++        +E ALL  YGK G+++  EKI
Sbjct: 308 VEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKI 367

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F +++ +   VSWN+MI+ Y++ E+  +A+ L   ++ +    D+FT +TV+ A   + +
Sbjct: 368 FGKIANK-TLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGS 426

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           L    ++H+  +      + +I +A++ MY++ G +  +   FD M  ++V SWN+MI G
Sbjct: 427 LRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMG 486

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           YA HG G  AL +F +MK +G  P+  TFV VL+ACS +GLVDEG+ HF  M Q YG+IP
Sbjct: 487 YAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIP 546

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAAN 756
           Q+E + CM DLLGR G+L ++ +FI  MPI P S +W ++L A    N    ++   AA 
Sbjct: 547 QIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQN--DIDIAEYAAE 604

Query: 757 MLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV 816
            +F++E  N   Y++L++MYA  G+WEDV + R  MKE  +++    S V +      F 
Sbjct: 605 RIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFA 664

Query: 817 AGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESK-EDLVSYHSEKIAVAF 875
            GD SH +   I+E    L++K+++      T+   + +   ++   + + HS ++AV F
Sbjct: 665 NGDMSHSQSRTIHEVSDILSRKIKETD---DTRNQSYPVPVATRTTTMPNKHSVRLAVVF 721

Query: 876 -VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            +++     PI + KN+R+C  CH A K IS+  GR IV+ DS  +H F+DG C CGDYW
Sbjct: 722 GLISSEIGSPILVKKNVRICNHCHHALKLISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 214/446 (47%), Gaps = 13/446 (2%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           LV   A  G +D++      + G D+   N MI G    G    A+  +  M  DG    
Sbjct: 47  LVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPD 106

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
            F+    +  CA LG +  G+  HG  +KLGL+ DV   N+L++ YA  G +    +VF 
Sbjct: 107 RFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFD 166

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA-GWSPNGVTFINILAAASSFSMG 475
            MP  D V+WN ++  +  S  L S A+  + +M  A     + V  I  LAA       
Sbjct: 167 GMPVRDIVTWNIMVDGYV-SNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSS 225

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             G ++H  VI++ +  +  +  +LL  Y KCGE+     +FA M   R  V+WN MI G
Sbjct: 226 MQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMP-LRTVVTWNCMIGG 284

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
           Y  NE   +A +    M   G +++  T   +L+ACA   +   G  VH   VR      
Sbjct: 285 YALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPH 344

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
           VV+ +AL++MY K G+++ + + F  +  + + SWN+MI+ Y       +A+TLF ++ L
Sbjct: 345 VVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLEL-L 403

Query: 656 DGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSM-SQVYGL--IPQLEQFSCMVDLLGRA 711
           + PL PD+ T   V+ A    G      +H + + S + GL         + ++ +  R+
Sbjct: 404 NQPLYPDYFTMSTVVPAFVLLG----SLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARS 459

Query: 712 GELDKIEEFINKMPITPNSLIWRTVL 737
           G++    E  +KM ++ + + W T++
Sbjct: 460 GDVVASREIFDKM-VSKDVISWNTMI 484



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 193/455 (42%), Gaps = 50/455 (10%)

Query: 57  IVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLK 116
           ++ G+   G+   A   ++ M+  G   +R+    V++ C   G  G   G   H +V+K
Sbjct: 78  MIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLG--GLDEGRAAHGMVIK 135

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
                D    N L+A Y   L   + A R+F+ +  RD+++WN ++  Y   G       
Sbjct: 136 LGLEHDVYTCNSLVAFYAK-LGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALA 194

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
            F  M       +L+    + G +   A   +   S   ++I   V + GL  D+ VG++
Sbjct: 195 CFQEMHD-----ALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTS 249

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM--------------------------- 269
           L+  + + G   YAR +F  M  + VV+ N ++                           
Sbjct: 250 LLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVE 309

Query: 270 --------------EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                         E    G+ VHGY++R      V +   L+ MY K G ++ S  +F 
Sbjct: 310 VVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFG 369

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            +  K  VSWN MI+       Y EAI  F  +    L    F++ + + +   LG +  
Sbjct: 370 KIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRH 429

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
            +QIH   + LG   +  + NA+L +YA +G +    ++F  M   D +SWN++I  +A 
Sbjct: 430 CRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYA- 488

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
                  A++ + +M+  G  PN  TF+++L A S
Sbjct: 489 IHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACS 523



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 208/479 (43%), Gaps = 63/479 (13%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H  ++K G  +DV+ CN+L+  Y ++G +  A ++FD MP R+ V+W  +V GY 
Sbjct: 125 EGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYV 184

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALG--SVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
             G+ + A   F+EM  A   +   ++G  + L AC  C       G ++H  V++    
Sbjct: 185 SNGLGSLALACFQEMHDA-LEVQHDSVGIIAALAAC--CLEFSSMQGKEIHGYVIRHGLE 241

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D  V   L+ MY  C E    AR +F  +  R +++WN +I  Y+        F  F +
Sbjct: 242 QDIKVGTSLLDMYCKCGE-VAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQ 300

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M+ EG +  +     T  +L+ A   +    S   + +   V +   L  + + +AL+  
Sbjct: 301 MRAEGLQVEV----VTAINLLAACAQT--ESSLYGRSVHGYVVRRQFLPHVVLETALLEM 354

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNG--------------------------------- 267
           + ++G    + KIF ++  K +VS N                                  
Sbjct: 355 YGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTM 414

Query: 268 --------LMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                   L+   R  +++H Y+I  G  +   + N +++MYA+ G +  SR +F  M+ 
Sbjct: 415 STVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVS 474

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA-----SLGWIM 374
           KD +SWNTMI G   +G  + A+  F  M+ +GL  +  + +S L++C+       GW+ 
Sbjct: 475 KDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMH 534

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
               +     + G+   +     +  L    G L   L+    MP +     W S++ A
Sbjct: 535 FNLMLQ----EYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTA 589



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 137/272 (50%), Gaps = 11/272 (4%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S   K  H  +++HG   D+ +  +L+++Y + G++A A  +F  MP R  V+W C++ G
Sbjct: 225 SMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGG 284

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y      +EA   F +M   G  +      ++L AC +   S   +G  VH  V++    
Sbjct: 285 YALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESS--LYGRSVHGYVVRRQFL 342

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
              ++   L+ MYG  +   + + +IF +I  + L+SWN++I+ Y  +        LF  
Sbjct: 343 PHVVLETALLEMYGK-VGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLE 401

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL-LQQILAMVKKAGLLSDLYVGSALVS 239
           +  +     L P+ +T  +++ A    VL GS    +QI + +   G   +  + +A++ 
Sbjct: 402 LLNQ----PLYPDYFTMSTVVPAF---VLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLH 454

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
            +AR G+   +R+IF++M+ K+V+S N ++ G
Sbjct: 455 MYARSGDVVASREIFDKMVSKDVISWNTMIMG 486



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 52/99 (52%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H  I+  G+A +  + N ++++Y R GD+ ++ ++FD+M  ++ +SW  ++ GY
Sbjct: 428 RHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGY 487

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G    A +MF EM   G   N     SVL AC   G
Sbjct: 488 AIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSG 526


>gi|2244842|emb|CAB10264.1| hypothetical protein [Arabidopsis thaliana]
 gi|7268231|emb|CAB78527.1| hypothetical protein [Arabidopsis thaliana]
          Length = 587

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/636 (38%), Positives = 352/636 (55%), Gaps = 50/636 (7%)

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
           MY+K    + +R V R    ++ VSW ++ISGL QNG +  A++ F  MRR+ +      
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREAV------ 54

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
                   ASL   + G+QIH   +K G   DV V  +   +Y          K+F  +P
Sbjct: 55  --------ASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 106

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
           E +  +WN+ I + + ++    EA++ +++ RR    PN +TF   L A S +    LG 
Sbjct: 107 ERNLETWNAFI-SNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 165

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           Q+H  V++     + +I ++              E IF  M  + + VSW S+++ Y+ N
Sbjct: 166 QLHGLVLRSGFDTDVSIRSS--------------EIIFTEMGTK-NAVSWCSLVAAYVQN 210

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
               KA  L     +       F  ++VLSACA +A LE G  +HA  V+AC+E  + +G
Sbjct: 211 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 270

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           SALVDMY KCG I+ + + FD MP +N+ + NS+I GYA  G  D AL LF +M   G  
Sbjct: 271 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRG-- 328

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
                           G V+ G K F SM   YG+ P  E +SC+VD+LGRAG +++  E
Sbjct: 329 ---------------CGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYE 373

Query: 720 FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASG 779
           FI KMPI P   +W  +  AC      K +LG  AA  LF+++P+++ N+VLL+N +A+ 
Sbjct: 374 FIKKMPIQPTISVWGALQNACRMHG--KPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAA 431

Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
           G+W +    R+ +K   +KK AG SW+T+K+ VH F A D SH     I   L +L  +M
Sbjct: 432 GRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEM 491

Query: 840 RDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCH 898
             AGY P  K +L+DLE E K   VS+HSEK+A+AF +L+    +PIRI KNLR+CGDCH
Sbjct: 492 EAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCH 551

Query: 899 SAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           S FKF+S  V REI++RD+NRFH F DG CSC DYW
Sbjct: 552 SFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 587



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 189/408 (46%), Gaps = 37/408 (9%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVG 294
           ++L+SG A+ G+F  A   F +M ++ V S+   +     GK++H   ++ G    V VG
Sbjct: 27  TSLISGLAQNGHFSTALVEFFEMRREAVASLRLPV----TGKQIHALAVKCGRILDVFVG 82

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
               +MY K    DD+R +F  +  ++  +WN  IS    +G   EAI  F   RR    
Sbjct: 83  CSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGH 142

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
            ++ +  + L++C+    + LG Q+HG  L+ G D+DVS+ ++ +              +
Sbjct: 143 PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSIRSSEI--------------I 188

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  M   + VSW S++ A+  +      +V  YL  R+     +     ++L+A +  + 
Sbjct: 189 FTEMGTKNAVSWCSLVAAYVQNHEDEKASV-LYLRSRKDIVETSDFMISSVLSACAGMAG 247

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            +LG  +HA  +K  V     + +AL+  YGKCG ++D E+ F  M E ++ V+ NS+I 
Sbjct: 248 LELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPE-KNLVTRNSLIG 306

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           GY H   +  A+ L   M  RG          +  +  S   +E G E ++C        
Sbjct: 307 GYAHQGQVDMALALFEEMAPRGCGAVE-NGMKIFDSMRSTYGIEPGAEHYSC-------- 357

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYARHG 641
                  +VDM  + G ++ A  F   MP++   S W ++ +    HG
Sbjct: 358 -------IVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 398



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 146/313 (46%), Gaps = 34/313 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   +K G   DVF+  +  ++Y +      A KLFDE+P+RN  +W   +S     
Sbjct: 64  KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 123

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   EA + F E  R     N     + L AC +        GMQ+H LVL+S   FD  
Sbjct: 124 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW--LHLNLGMQLHGLVLRSG--FDTD 179

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           VS          + S++    IF E+ T++ +SW S+++ Y Q  +      L+ R +++
Sbjct: 180 VS----------IRSSEI---IFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKD 226

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                ++ +++   S+++A     ++G  L + I A   KA +   ++VGSALV  + + 
Sbjct: 227 ----IVETSDFMISSVLSACAG--MAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKC 280

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
           G    + + F++M +KN+V+ N L+ G     +V   L    LF+ +A           C
Sbjct: 281 GCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMAL---ALFEEMAPRG--------C 329

Query: 305 GTIDDSRSVFRFM 317
           G +++   +F  M
Sbjct: 330 GAVENGMKIFDSM 342



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 110/480 (22%), Positives = 187/480 (38%), Gaps = 80/480 (16%)

Query: 29  VYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYA 88
           +Y ++    SA  +    P RN VSW  ++SG    G  + A   F EM R      R  
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREAVASLRLP 60

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE 148
           +                 G Q+H L +K  +  D  V      MY       D AR++F+
Sbjct: 61  VT----------------GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD-ARKLFD 103

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
           EI  R+L +WN+ IS     G      + F   +    R    PN  TF + + A    +
Sbjct: 104 EIPERNLETWNAFISNSVTDGRPREAIEAFIEFR----RIDGHPNSITFCAFLNACSDWL 159

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN---------------------- 246
                L  Q+  +V ++G  +D+ + S+ +  F  +G                       
Sbjct: 160 HLN--LGMQLHGLVLRSGFDTDVSIRSSEII-FTEMGTKNAVSWCSLVAAYVQNHEDEKA 216

Query: 247 ---FYYARK-IFE--QMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
              +  +RK I E    +  +V+S    M G   G+ +H + +++ +   + VG+ LV+M
Sbjct: 217 SVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDM 276

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM--RRDGLMSSNF 358
           Y KCG I+DS   F  M  K+ V+ N++I G    G  + A+  F  M  R  G + +  
Sbjct: 277 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGAVENGM 336

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
            +  ++ S                    G++      + ++ +   AG + R  +    M
Sbjct: 337 KIFDSMRS------------------TYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKM 378

Query: 419 PEHDQVS-WNSVIGAF----ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           P    +S W ++  A          L++    + LD + +G   N V   N  AAA  ++
Sbjct: 379 PIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSG---NHVLLSNTFAAAGRWA 435


>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
 gi|194688780|gb|ACF78474.1| unknown [Zea mays]
 gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
          Length = 695

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/679 (35%), Positives = 381/679 (56%), Gaps = 21/679 (3%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R G ++HG + + G      +GN L++MY KCG +D +  VF  M  ++ VSW  ++ G 
Sbjct: 21  RGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNVVSWTALMVGF 80

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
            ++G     +     MR     + N ++L ++L +C  +G    G  IHG  ++ G    
Sbjct: 81  LRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEH 140

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV-SWNSVIGAFADSEALVSEAVKYYLDM 450
             V+++L+ +Y+  G +    +VF        + +WN+++  +A +     +A+  + +M
Sbjct: 141 DVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHA-GHGRDALLVFREM 199

Query: 451 RR--AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTIENALLSCYGK 506
           RR      P+  TF ++L A S     + G QVHA +    ++ A+   +  AL+  Y K
Sbjct: 200 RRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVK 259

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
           C  +    ++F R+ ER++ + W +++ G+     + +A+ L     + G R D    ++
Sbjct: 260 CRRLPVAMQVFERL-ERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSS 318

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           V+   A  A +E+G +VH  G++     DV  G+++VDMY KCG  D A R F  M   N
Sbjct: 319 VVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPN 378

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
           V SW +M++G  +HG G +A+ LF +M+  G  PD VT++ +LSACSHAGLVDE  ++F 
Sbjct: 379 VVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFS 438

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
            + +   + P+ E ++CMVDLLGRAGEL +  + I  MP+ P   +W+T+L A CR + +
Sbjct: 439 CIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSA-CRVH-K 496

Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
              +GR+A ++L  M+  N VNYV L+N+ A  G+W +  K R AM+   +KK+ GCSWV
Sbjct: 497 DVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWV 556

Query: 807 TMKDGVHVFVAG---DESHPEKDLIYEKLKELNQKMRDA-GY-VPQTKFALFDLEPESKE 861
            +   VH F  G   +E+HP+   I   L+++  +MR+  GY     +FAL D++ ES+ 
Sbjct: 557 EVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLGYNADDARFALHDVDEESRA 616

Query: 862 DLVSYHSEKIAVAFVLTRNS------KLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLR 915
           + +  HSE++AV   L RN         PIR+ KNLRVCGDCH  FK +S +V R +V+R
Sbjct: 617 ESLRAHSERLAVGLWLLRNGVDGGGHGEPIRVYKNLRVCGDCHEFFKGLSAVVRRALVVR 676

Query: 916 DSNRFHHFNDGKCSCGDYW 934
           D+NRFH F  G CSC DYW
Sbjct: 677 DANRFHRFEHGSCSCKDYW 695



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 140/521 (26%), Positives = 233/521 (44%), Gaps = 69/521 (13%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  I K GF  D  L N LI++YV+ G+L  A ++F  M DRN VSW  ++ G+   G 
Sbjct: 26  LHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGD 85

Query: 67  SNEACKMFKEMVRAG-FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
           +    ++  EM  A     N Y L + L+AC  C       G+ +H L +++      +V
Sbjct: 86  ATGCLRLLGEMRTASEAAPNEYTLSASLKAC--CVVGDTAAGVGIHGLCVRAGYQEHDVV 143

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIE-TRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           ++ L+ +Y       D ARR+F+       + +WN+++S Y+  G       +F  M+R 
Sbjct: 144 ASSLVLVYSKGGRIGD-ARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRH 202

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL--LSDLYVGSALVSGFA 242
             ++  +P+E+TF SL+ A   S L  +    Q+ A +  +G    S+  +  ALV  + 
Sbjct: 203 EGQH--QPDEFTFASLLKAC--SGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYV 258

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG--------------RR--------------- 273
           +      A ++FE++ +KNV+    ++ G              RR               
Sbjct: 259 KCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSS 318

Query: 274 ------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                       +G++VH Y I+      V+ GN +V+MY KCG  D++  +FR M   +
Sbjct: 319 VVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPN 378

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            VSW TM++GL ++G   EA+  F  MR  G+     + ++ LS+C+  G +   ++   
Sbjct: 379 VVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFS 438

Query: 382 EGLKLGLDSDVSVSNA------LLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA-- 432
                 +  D +V         ++ L   AG L     +   MP    V  W +++ A  
Sbjct: 439 -----CIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACR 493

Query: 433 FADSEALVSEAVKYYLDMRRAGWSP-NGVTFINILAAASSF 472
                A+  EA    L M   G +P N VT  N+LA A  +
Sbjct: 494 VHKDVAVGREAGDVLLAM--DGDNPVNYVTLSNVLAEAGEW 532



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 122/230 (53%), Gaps = 5/230 (2%)

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
            +L A++  S  + G Q+H  + K    ++T + N L+  Y KCGE+D   ++F  M + 
Sbjct: 9   GLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRD- 67

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL-DHFTFATVLSACASVATLERGME 582
           R+ VSW +++ G++ +      + L+  M    +   + +T +  L AC  V     G+ 
Sbjct: 68  RNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVG 127

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSMISGYARHG 641
           +H   VRA  +   V+ S+LV +YSK GRI  A R FD   +   + +WN+M+SGYA  G
Sbjct: 128 IHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAG 187

Query: 642 HGDKALTLFSQMKL-DGP-LPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           HG  AL +F +M+  +G   PD  TF  +L ACS  G   EG +   +M+
Sbjct: 188 HGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMT 237



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 1/110 (0%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
            A +L A A  ++L  G+++H    +     D ++G+ L+DMY KCG +D A   F  M 
Sbjct: 7   IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR 66

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG-PLPDHVTFVGVLSAC 672
            RNV SW +++ G+ RHG     L L  +M+      P+  T    L AC
Sbjct: 67  DRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKAC 116


>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 256/785 (32%), Positives = 408/785 (51%), Gaps = 79/785 (10%)

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------ 274
           L  D+++G+AL+S + +LG    A K+F  +   NVVS   L+ G  K            
Sbjct: 126 LEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFF 185

Query: 275 -----------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
                                        G +VHG +++ GL   V + N L+ +Y KCG
Sbjct: 186 AMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCG 245

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR-DGLMSSNFSLISTL 364
            +D    +F  M  +D  SWNT+IS L +   Y+EA   F  M+   GL   +FSL + L
Sbjct: 246 FLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLL 305

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
           ++CA     M GQQ+H   LK+GL+S +SVS++L+  Y   G  +    +F  MP  D +
Sbjct: 306 TACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVI 365

Query: 425 SWNSVIGAFA-----DSEALV-------------------------SEAVKYYLDMRRAG 454
           +W  +I ++      DS   V                         S A++ +++M   G
Sbjct: 366 TWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEG 425

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
              +  T  +I+ A       K+  Q+   V+K+ + + + IE AL+  Y +CG M+D E
Sbjct: 426 VEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAE 485

Query: 515 KIFARMSERRDEVS-WNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACA 572
           KIF + S   D  +   SMI GY  N  L +A++L       G   +D     ++LS C 
Sbjct: 486 KIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCG 545

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
           S+   E G ++H   +++ L  +  +G+A V MYSKC  +D A R F+ M ++++ SWN 
Sbjct: 546 SIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNG 605

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA--GLVDEGFKHFKSMSQ 690
           +++G+  H  GDKAL ++ +M+  G  PD +TF  ++SA  H    LVD     F SM  
Sbjct: 606 LVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMET 665

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
            + + P LE ++  + +LGR G L++ E+ I  MP+ P+  +WR +L + CR N +   L
Sbjct: 666 EHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNS-CRIN-KNERL 723

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
            + AA  +  +EP++ ++Y+L +N+Y++ G+W    K R+ M+E   +K    SW+  ++
Sbjct: 724 EKLAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHEN 783

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
            +H F A D SHP+   IY  L+ L  +    GYVP T F L ++E   K++ + YHS K
Sbjct: 784 KIHSFYARDRSHPQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGK 843

Query: 871 IAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +A  F +L      PI+I+KN+R+CGDCH+  K++S +  R+I+LRD++ FH F DG+CS
Sbjct: 844 LAATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCS 903

Query: 930 CGDYW 934
           C DYW
Sbjct: 904 CTDYW 908



 Score =  216 bits (550), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 171/645 (26%), Positives = 304/645 (47%), Gaps = 60/645 (9%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H Q LK     D+FL N LI+ Y+++G +  A K+F  +   N VS+  ++SG++ 
Sbjct: 116 ARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSK 173

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
               +EA ++F  M+ +G   N Y   ++L AC       ++ G QVH +V+K       
Sbjct: 174 SDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIR--NMDYQLGSQVHGIVVKLGLLSCV 231

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            + N L+ +Y  C    D   R+FEE+  RD+ SWN++IS   +       F  F  MQ 
Sbjct: 232 FICNALMGLYCKC-GFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQ- 289

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSV--LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
                 LK + ++  +L+TA   SV  + G    QQ+ A+  K GL S L V S+L+  +
Sbjct: 290 --LCKGLKVDHFSLSTLLTACAGSVKPMKG----QQLHALALKVGLESHLSVSSSLIGFY 343

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
            + G+      +FE M  ++V++                               G++  Y
Sbjct: 344 TKCGSANDVTDLFETMPIRDVITW-----------------------------TGMITSY 374

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
            + G +D +  VF  M  ++ +S+N +++GL +N     A+  F  M  +G+  S+ +L 
Sbjct: 375 MEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLT 434

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-E 420
           S +++C  L    + QQI G  +K G+ S+  +  AL+ +Y   G +    K+F+    E
Sbjct: 435 SIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLE 494

Query: 421 HDQVS-WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
           +D  +   S+I  +A +  L      ++          + V   +IL+   S    ++G 
Sbjct: 495 NDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGK 554

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           Q+H   +K  +  ET + NA +S Y KC  MDD  ++F  M+  +D VSWN +++G++ +
Sbjct: 555 QMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMN-MQDIVSWNGLVAGHVLH 613

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSA--------CASVATLERGMEVHACGVRAC 591
               KA+ +   M + G + D  TFA ++SA          S  +L   ME     ++  
Sbjct: 614 WQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEH-NIKPT 672

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMIS 635
           LE      ++ + +  + G ++ A +    MP+  +VY W ++++
Sbjct: 673 LEH----YASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLN 713



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 230/485 (47%), Gaps = 40/485 (8%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            + VH   ++  L + + +GN L++ Y K G + D+  VF  +   + VS+  +ISG  +
Sbjct: 116 ARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSK 173

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +   +EA+  F AM   G+  + ++ ++ L++C       LG Q+HG  +KLGL S V +
Sbjct: 174 SDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFI 233

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA- 453
            NAL+ LY   G+L   L++F  MPE D  SWN+VI +    E    EA  Y+  M+   
Sbjct: 234 CNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLV-KEFKYDEAFDYFRGMQLCK 292

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G   +  +   +L A +       G Q+HA  +K  + +  ++ ++L+  Y KCG  +D 
Sbjct: 293 GLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDV 352

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELL----------PK------------------- 544
             +F  M   RD ++W  MI+ Y+   +L          PK                   
Sbjct: 353 TDLFETMP-IRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDG 411

Query: 545 --AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
             A+ L   M++ G  +   T  ++++AC  + + +   ++    ++  +  +  I +AL
Sbjct: 412 SRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETAL 471

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYS--WNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           VDMY++CGR++ A + F    + N Y+    SMI GYAR+G  ++A++LF   + +G + 
Sbjct: 472 VDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIV 531

Query: 661 -DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
            D V    +LS C   G  + G K     +   GLI +    +  V +  +   +D    
Sbjct: 532 MDEVMSTSILSLCGSIGFHEMG-KQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVR 590

Query: 720 FINKM 724
             N M
Sbjct: 591 VFNTM 595


>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 754

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/670 (36%), Positives = 384/670 (57%), Gaps = 19/670 (2%)

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VHG+++++G  D   V + LVN+YAKCG ++D+R VF  M  ++ V+W T++ G  QN  
Sbjct: 86  VHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQ 145

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
            + AI  F  M   G   S ++L + L +C+SL  + LG Q H   +K  LD D SV +A
Sbjct: 146 PKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSA 205

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L SLY+  G L   LK F  + E + +SW S + A  D+ A V + ++ +++M      P
Sbjct: 206 LCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPV-KGLRLFVEMISEDIKP 264

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           N  T  + L+        +LG QV +  IK+   +   + N+LL  Y K G + +  + F
Sbjct: 265 NEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFF 324

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPK-----------AMNLVWFMMQRGQRLDHFTFAT 566
            RM +    V+WN+MI+G+     L K           A+ +   + Q G + D FT ++
Sbjct: 325 NRMDDV-SMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSS 383

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           VLS C+ +  +E+G ++HA  ++     DV++ ++L+ MY+KCG I+ AS+ F  M  R 
Sbjct: 384 VLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRT 443

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
           + +W SMI+G+++HG   +AL +F  M L G  P+ VTFVGVLSACSHAG+V +   +F+
Sbjct: 444 MIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFE 503

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
            M + Y + P ++ + CMVD+  R G L++   FI KM   P+  IW   + A CR++  
Sbjct: 504 IMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFI-AGCRSH-G 561

Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
             ELG  A+  L  ++P++   YVLL NMY S  +++DV++ RK M+  +V K    SW+
Sbjct: 562 NLELGFYASEQLLSLKPKDPETYVLLLNMYLSADRFDDVSRVRKMMEVEKVGKLKDWSWI 621

Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVS- 865
           ++KD V+ F   D++HP   LI + L++L  K ++ GY       + D E E K    + 
Sbjct: 622 SIKDKVYSFKTNDKTHPPSSLICKSLEDLLAKAKNLGYEMLESVEISDEEEEEKTSSPTI 681

Query: 866 YHSEKIAVAFVLTR--NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
           YHSEK+A+ F L    NS  PIR++K+  +C D H+  K +S + GREI+++DS R H F
Sbjct: 682 YHSEKLAITFGLENLPNSS-PIRVVKSTLICRDSHNFIKCVSTLTGREIIVKDSKRLHKF 740

Query: 924 NDGKCSCGDY 933
            +G+CSCG++
Sbjct: 741 VNGECSCGNF 750



 Score =  189 bits (479), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 226/481 (46%), Gaps = 56/481 (11%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---- 271
           Q +   V K G   + +V S LV+ +A+ GN   AR++FE M ++NVV+   LM G    
Sbjct: 84  QIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQN 143

Query: 272 -------------------------------------RRKGKEVHGYLIRSGLFDMVAVG 294
                                                 + G + H Y+I+  L    +VG
Sbjct: 144 SQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVG 203

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           + L ++Y+KCG ++D+   F  +  K+ +SW + +S    NG   + +  F  M  + + 
Sbjct: 204 SALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIK 263

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
            + F+L S LS C  +  + LG Q+    +K G +S++ V N+LL LY  +G++    + 
Sbjct: 264 PNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRF 323

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALV----------SEAVKYYLDMRRAGWSPNGVTFIN 464
           F  M +   V+WN++I   A    L           SEA+K +  + ++G  P+  T  +
Sbjct: 324 FNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSS 383

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           +L+  S     + G Q+HAQ IK    ++  +  +L+S Y KCG ++   K F  MS  R
Sbjct: 384 VLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMST-R 442

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
             ++W SMI+G+  + +  +A+++   M   G R +  TF  VLSAC+    + + +   
Sbjct: 443 TMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYF 502

Query: 585 ACGVRACLEFDVVIG--SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHG 641
              ++   +   V+     +VDM+ + GR++ A  F   M    + + W++ I+G   HG
Sbjct: 503 EI-MQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHG 561

Query: 642 H 642
           +
Sbjct: 562 N 562



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 189/422 (44%), Gaps = 61/422 (14%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            ++ H  ++K G   + F+ + L+NVY + G++  A ++F+ MP RN V+W  ++ G+  
Sbjct: 83  TQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQ 142

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                 A  +F+EM+ AG   + Y L +VL AC        K G Q H  ++K +  FD 
Sbjct: 143 NSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSL--QSLKLGDQFHAYIIKYHLDFDT 200

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V + L ++Y  C    D A + F  I  +++ISW S +S     G  +   +LF  M  
Sbjct: 201 SVGSALCSLYSKCGRLED-ALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMIS 259

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           E     +KPNE+T  S ++      +    L  Q+ ++  K G  S+L V ++L+  + +
Sbjct: 260 E----DIKPNEFTLTSALSQCCE--IPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLK 313

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------------- 272
            G    A + F +M   ++V+ N ++ G                                
Sbjct: 314 SGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSG 373

Query: 273 ---------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
                                 +G+++H   I++G    V V   L++MY KCG+I+ + 
Sbjct: 374 MKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERAS 433

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
             F  M  +  ++W +MI+G  Q+G  ++A+  F  M   G+  +  + +  LS+C+  G
Sbjct: 434 KAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAG 493

Query: 372 WI 373
            +
Sbjct: 494 MV 495



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 2/177 (1%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +  +L  C    +      VH   ++     +  + S LV++Y+KCG ++ A R F+ MP
Sbjct: 67  YVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMP 126

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            RNV +W +++ G+ ++     A+ +F +M   G  P   T   VL ACS    +  G  
Sbjct: 127 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLG-D 185

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC 740
            F +    Y L       S +  L  + G L+   +  +++    N + W + + AC
Sbjct: 186 QFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIR-EKNVISWTSAVSAC 241


>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 242/649 (37%), Positives = 372/649 (57%), Gaps = 56/649 (8%)

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ-NGCYEEAIMNFCA 347
           D+V++   + +    C  ++ +R+VF  M  + +V+WNTM+SG  +  G  +EA   F  
Sbjct: 72  DVVSLNKTIASFVRACD-LESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDK 130

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           +     +S N  L+  L S      +    ++  +        D++  N L+S +A  G 
Sbjct: 131 IPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVK--------DIASWNTLISGFAQNGQ 182

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           + +   +F +MPE + VSW+++I  + +   L +                          
Sbjct: 183 MQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEA-------------------------- 216

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTI-ENALLSCYGKCGEMDDCEKIFARMSERRDE 526
                          A+ +  NV  ++ + E A+L+ Y K G+++  E+IF RM+ + + 
Sbjct: 217 ---------------AEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVK-NL 260

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           V+WNSMI+GY+ N      + +   M++   R +  + ++VL  C++++ L  G ++H  
Sbjct: 261 VTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQL 320

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
             ++ L  D    ++L+ MY KCG +D A + F  MP ++V +WN+MISGYA+HG G KA
Sbjct: 321 VSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKA 380

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           L LF +M+     PD +TFV V+ AC+HAG VD G ++FKSM + +G+  +   ++C++D
Sbjct: 381 LHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVID 440

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           LLGRAG LD+    I +MP TP++ I+ T+LGA CR + +  +L   AA  L  ++P +A
Sbjct: 441 LLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGA-CRIH-KNLDLAEFAARNLLNLDPTSA 498

Query: 767 VNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKD 826
             YV LAN+YA+  KW+ VAK RK MKE  V K  G SW+ +K   H F + D  HPE  
Sbjct: 499 TGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELT 558

Query: 827 LIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPI 885
            I++KL EL+ KM+ AGYVP  +FAL D+E E KE L+ +HSEK+A+AF L + +   PI
Sbjct: 559 SIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPI 618

Query: 886 RIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           R+ KNLRVCGDCH A KFIS I  REI++RD+ RFHHF +G CSCGDYW
Sbjct: 619 RVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 124/544 (22%), Positives = 230/544 (42%), Gaps = 77/544 (14%)

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQ-RGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
           + AR +FE++  R  ++WN+++S Y++  G      +LF ++         +P+  ++  
Sbjct: 90  ESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIP--------EPDSVSYNI 141

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           ++     S     Y ++  LA   K  +  D+   + L+SGFA+ G    A  +F  M +
Sbjct: 142 MLVCYLRS-----YGVKAALAFFNKMPV-KDIASWNTLISGFAQNGQMQKAFDLFSVMPE 195

Query: 260 KNVVSMNGLMEGRRKGKEVHGY--LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
           KN VS + ++ G  +  ++     L ++     V V   ++  Y K G ++ +  +F+ M
Sbjct: 196 KNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRM 255

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             K+ V+WN+MI+G  +N   E+ +  F  M    +  +  SL S L  C++L  + LG+
Sbjct: 256 AVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGR 315

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           Q+H    K  L  D +   +L+S+Y   G L    K+F  MP  D ++WN++I  +A   
Sbjct: 316 QMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHG 375

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTI 496
           A   +A+  +  MR     P+ +TF+ ++ A +      LG Q    + K + +  +   
Sbjct: 376 A-GRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVH 434

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
              ++   G+ G +D+   +   M                      P A           
Sbjct: 435 YTCVIDLLGRAGRLDEAVSLIKEMP-------------------FTPHAA---------- 465

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA---LVDMYSKCGRID 613
                  + T+L AC     + + +++     R  L  D    +    L ++Y+   + D
Sbjct: 466 ------IYGTLLGAC----RIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWD 515

Query: 614 YASRFFDLMPVRNV-----YSWNSMISGYARHGHGDK---ALT--------LFSQMKLDG 657
             ++   +M   NV     YSW  + S        D+    LT        L  +MKL G
Sbjct: 516 QVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAG 575

Query: 658 PLPD 661
            +PD
Sbjct: 576 YVPD 579



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 106/450 (23%), Positives = 185/450 (41%), Gaps = 107/450 (23%)

Query: 17  AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH-KGMSNEACKMFK 75
           A DV   N  I  +VR  DL SA  +F++M  R +V+W  ++SGYT   G   EA ++F 
Sbjct: 70  ASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFD 129

Query: 76  EMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS 135
           ++                       P    + + + C  L+S               YG 
Sbjct: 130 KIPE---------------------PDSVSYNIMLVCY-LRS---------------YG- 151

Query: 136 CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
                  A   F ++  +D+ SWN++IS ++Q G     F LFS M  +           
Sbjct: 152 ----VKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKN---------- 197

Query: 196 TFGSLITAAYSSVLSGSYL----LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
                   ++S+++SG Y+    L+    + K  G+ S + V +A+++G+ + G    A 
Sbjct: 198 ------GVSWSAMISG-YVEHGDLEAAEELYKNVGMKS-VVVETAMLTGYMKFGKVELAE 249

Query: 252 KIFEQMIQKNVVSMNGLMEGRRK------------------------------------- 274
           +IF++M  KN+V+ N ++ G  +                                     
Sbjct: 250 RIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLS 309

Query: 275 ----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
               G+++H  + +S L         L++MY KCG +D +  +F  M  KD ++WN MIS
Sbjct: 310 ALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMIS 369

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLD 389
           G  Q+G   +A+  F  MR   +     + ++ + +C   G++ LG Q      K  G++
Sbjct: 370 GYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIE 429

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           +       ++ L   AG L   + +   MP
Sbjct: 430 AKPVHYTCVIDLLGRAGRLDEAVSLIKEMP 459



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 84/382 (21%), Positives = 158/382 (41%), Gaps = 63/382 (16%)

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           L +   SDV   N  ++ +  A  L     VF  M     V+WN+++  +      V EA
Sbjct: 65  LHVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEA 124

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
            + +  +      P+ V++                                   N +L C
Sbjct: 125 HELFDKIPE----PDSVSY-----------------------------------NIMLVC 145

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           Y +   +      F +M   +D  SWN++ISG+  N  + KA +L   M ++    +  +
Sbjct: 146 YLRSYGVKAALAFFNKMPV-KDIASWNTLISGFAQNGQMQKAFDLFSVMPEK----NGVS 200

Query: 564 FATVLSACASVATLERGMEVHA-CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           ++ ++S       LE   E++   G+++     VV+ +A++  Y K G+++ A R F  M
Sbjct: 201 WSAMISGYVEHGDLEAAEELYKNVGMKS-----VVVETAMLTGYMKFGKVELAERIFQRM 255

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
            V+N+ +WNSMI+GY  +   +  L +F  M      P+ ++   VL  CS+   +  G 
Sbjct: 256 AVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLG- 314

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLG---RAGELDKIEEFINKMPITPNSLIWRTVLGA 739
              + M Q+    P  +  +    L+    + G+LD   +   +MP   + + W  ++  
Sbjct: 315 ---RQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMP-RKDVITWNAMISG 370

Query: 740 CCRANCRKTELGRKAANMLFEM 761
             +        GRKA ++  +M
Sbjct: 371 YAQHGA-----GRKALHLFDKM 387



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 48/93 (51%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  + K   + D   C +LI++Y + GDL SA KLF EMP ++ ++W  ++SGY   G  
Sbjct: 318 HQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAG 377

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            +A  +F +M       +     +V+ AC   G
Sbjct: 378 RKALHLFDKMRNGTMKPDWITFVAVILACNHAG 410


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 259/747 (34%), Positives = 401/747 (53%), Gaps = 55/747 (7%)

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN---------GLMEGR--------- 272
           L +G+A++S   R G  ++A ++F +M +++V S N         GL+E           
Sbjct: 129 LRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMW 188

Query: 273 -----------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
                                  R G+EVH +++R G  + V V N L+ MYAKCG +  
Sbjct: 189 AGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVA 248

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +R VF  M   D +SWN MI+G  +NG     +  F  M +D +  +  ++ S   +   
Sbjct: 249 ARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGL 308

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           L  I   +++HG  +K G  +DV+  N+L+ +YA  G + +   VF  M   D +SW ++
Sbjct: 309 LSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAM 368

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           I  + +      +A++ Y  M     SP+ +T  + LAA +      +G ++H       
Sbjct: 369 ISGY-EKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKG 427

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV 549
             +   + NALL  Y K   +D   ++F  M E+ D VSW+SMI+G+  N    +A+   
Sbjct: 428 FMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEK-DVVSWSSMIAGFCFNHRNFEALYYF 486

Query: 550 WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
             M+    + +  TF   L+ACA+   L  G E+HA  +R  + ++  + +AL+D+Y KC
Sbjct: 487 RHMLA-DVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKC 545

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
           G+  YA   F     ++V SWN MI+G+  HG+G+ AL+ F+QM   G  PD VTFV +L
Sbjct: 546 GQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALL 605

Query: 670 SACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPN 729
            ACS  G+V EG++ F SM+  Y ++P L+ ++CMVDLL R G+L +   FIN+MPITP+
Sbjct: 606 CACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPD 665

Query: 730 SLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKAR 789
           + +W  +L   CR + R  ELG  AA  + E+EP +A  +VLL ++YA  G W+ +A+ R
Sbjct: 666 AAVWGALLNG-CRIH-RHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVR 723

Query: 790 KAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTK 849
           K M+E  +  ++GCSWV +K  VH F+  DESHP+   I   L+ + ++M+ +G  P   
Sbjct: 724 KTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGCAPVES 783

Query: 850 FALFDLEPES---KEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFIS 905
            +     PE    K+D+   HSE++AVAF L   +    I + KN   C  CH   K IS
Sbjct: 784 HS-----PEDKVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMIS 838

Query: 906 KIVGREIVLRDSNRFHHFNDGKCSCGD 932
            IV R+I++RDS + HHF DG CSCGD
Sbjct: 839 YIVRRDIIVRDSKQVHHFKDGSCSCGD 865



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 165/604 (27%), Positives = 286/604 (47%), Gaps = 76/604 (12%)

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
           R A+   LRAC         FG+++                N +++M     E+   A R
Sbjct: 107 RRAVEPGLRACAHADDRHAWFGLRL---------------GNAMLSMLVRFGETWH-AWR 150

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           +F ++  RD+ SWN ++  Y + G       L+ RM   G R    P+ YTF  ++ +  
Sbjct: 151 VFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVR----PDVYTFPCVLRSCG 206

Query: 206 SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
              +    + +++ A V + G   ++ V +AL++ +A+ G+   ARK+F+ M   + +S 
Sbjct: 207 G--VPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISW 264

Query: 266 NGLMEGRRK-----------------------------------------GKEVHGYLIR 284
           N ++ G  +                                          KE+HG  ++
Sbjct: 265 NAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVK 324

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
            G    VA  N L+ MYA  G +  +R+VF  M  +D++SW  MISG ++NG  ++A+  
Sbjct: 325 RGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEV 384

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           +  M  + +   + ++ S L++CA LG + +G ++H      G  S V V+NALL +YA 
Sbjct: 385 YALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAK 444

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFA----DSEALVSEAVKYYLDMRRAGWSPNGV 460
           +  + + ++VF  MPE D VSW+S+I  F     + EAL      YY     A   PN V
Sbjct: 445 SKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEAL------YYFRHMLADVKPNSV 498

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           TFI  LAA ++    + G ++HA V++  +A E  + NAL+  Y KCG+       F   
Sbjct: 499 TFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAH 558

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
              +D VSWN MI+G++ +     A++    M++ G+  D  TF  +L AC+    +  G
Sbjct: 559 GA-KDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEG 617

Query: 581 MEV-HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYA 638
            E+ H+   +  +  ++   + +VD+ S+ G++  A  F + MP+  +   W ++++G  
Sbjct: 618 WELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCR 677

Query: 639 RHGH 642
            H H
Sbjct: 678 IHRH 681



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 147/556 (26%), Positives = 255/556 (45%), Gaps = 53/556 (9%)

Query: 22  LCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAG 81
           L N ++++ VR G+   A ++F +MP+R+  SW  +V GY   G+  EA  ++  M+ AG
Sbjct: 131 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAG 190

Query: 82  FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD 141
              + Y    VLR+C   G   ++ G +VH  VL+     +  V N L+ MY  C +   
Sbjct: 191 VRPDVYTFPCVLRSCG--GVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVV- 247

Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
            AR++F+ +   D ISWN++I+ + + G+  +  +LF  M ++     ++PN  T  S+ 
Sbjct: 248 AARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQD----EVQPNLMTITSVT 303

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
            A  S +LS     +++  +  K G  +D+   ++L+  +A LG    AR +F +M  ++
Sbjct: 304 VA--SGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRD 361

Query: 262 VVSMNGLMEGRRK-----------------------------------------GKEVHG 280
            +S   ++ G  K                                         G ++H 
Sbjct: 362 AMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHE 421

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
                G    V V N L+ MYAK   ID +  VF+ M  KD VSW++MI+G   N    E
Sbjct: 422 LAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFE 481

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A+  F  M  D +  ++ + I+ L++CA+ G +  G++IH   L+ G+  +  + NAL+ 
Sbjct: 482 ALYYFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALID 540

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           LY   G        F      D VSWN +I  F  +      A+ ++  M + G  P+ V
Sbjct: 541 LYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFV-AHGNGETALSFFNQMVKIGECPDEV 599

Query: 461 TFINILAAASSFSMGKLGHQV-HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           TF+ +L A S   M   G ++ H+   KY++         ++    + G++ +       
Sbjct: 600 TFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINE 659

Query: 520 MSERRDEVSWNSMISG 535
           M    D   W ++++G
Sbjct: 660 MPITPDAAVWGALLNG 675



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 209/466 (44%), Gaps = 53/466 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +L+ GFA +V + N L+ +Y + GD+ +A K+FD M   + +SW  +++G+   G  
Sbjct: 218 HAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGEC 277

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           N   ++F  M++     N   + SV  A      S   F  ++H L +K     D    N
Sbjct: 278 NAGLELFLTMLQDEVQPNLMTITSVTVASGLL--SDITFAKEMHGLAVKRGFATDVAFCN 335

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI MY S L     AR +F  ++TRD +SW ++IS Y + G      ++++ M+     
Sbjct: 336 SLIQMYAS-LGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVN--- 391

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQ-QILAMVKKAGLLSDLYVGSALVSGFARLGN 246
            ++ P++ T   + +A  +    GS  +  ++  + +  G +S + V +AL+  +A+   
Sbjct: 392 -NVSPDDIT---IASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKR 447

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG----------------------------------- 271
              A ++F+ M +K+VVS + ++ G                                   
Sbjct: 448 IDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVKPNSVTFIAALAAC 507

Query: 272 -----RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                 R GKE+H +++R G+     + N L+++Y KCG    + + F     KD VSWN
Sbjct: 508 AATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWN 567

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI-HGEGLK 385
            MI+G   +G  E A+  F  M + G      + ++ L +C+  G +  G ++ H    K
Sbjct: 568 IMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDK 627

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI 430
             +  ++     ++ L +  G L+        MP   D   W +++
Sbjct: 628 YSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALL 673



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 195/455 (42%), Gaps = 52/455 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H   +K GFA DV  CN+LI +Y  +G +  A  +F  M  R+++SW  ++SGY  
Sbjct: 315 AKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEK 374

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G  ++A +++  M       +   + S L AC   G      G+++H L          
Sbjct: 375 NGFPDKALEVYALMEVNNVSPDDITIASALAACACLG--SLDVGVKLHELAESKGFMSYV 432

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +V+N L+ MY    +  D A  +F+ +  +D++SW+S+I+ +            F  M  
Sbjct: 433 VVTNALLEMYAKS-KRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLA 491

Query: 184 EGFRYSLKPNEYTF--GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           +     +KPN  TF       AA  ++ SG    ++I A V + G+  + Y+ +AL+  +
Sbjct: 492 D-----VKPNSVTFIAALAACAATGALRSG----KEIHAHVLRCGIAYEGYLPNALIDLY 542

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN------ 295
            + G   YA   F     K+VVS N ++ G       +G    S    MV +G       
Sbjct: 543 VKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFV--AHGNGETALSFFNQMVKIGECPDEVT 600

Query: 296 --GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
              L+   ++ G + +   +F  M  K S+     +  L    C  +       + R G 
Sbjct: 601 FVALLCACSRGGMVSEGWELFHSMTDKYSI-----VPNLKHYACMVD------LLSRVGQ 649

Query: 354 MSSNFSLISTL---SSCASLGWIMLGQQIH-----GE-GLKLGLD---SDVSVSNALLSL 401
           ++  ++ I+ +      A  G ++ G +IH     GE   K  L+   +D      L  L
Sbjct: 650 LTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDL 709

Query: 402 YADAGYLSRCLKVFFLMPE----HDQ-VSWNSVIG 431
           YADAG   +  +V   M E    HD   SW  V G
Sbjct: 710 YADAGIWDKLARVRKTMREKGLDHDSGCSWVEVKG 744



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 3/179 (1%)

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
           +W +    +  D   +  +   C     +E G+   A        F + +G+A++ M  +
Sbjct: 82  LWLLESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVR 141

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
            G   +A R F  MP R+V+SWN M+ GY + G  ++AL L+ +M   G  PD  TF  V
Sbjct: 142 FGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCV 201

Query: 669 LSACSHAGLVDEGF-KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPI 726
           L +C   G+ D    +   +    +G   +++  + ++ +  + G++    +  + M +
Sbjct: 202 LRSC--GGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAV 258



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 48/99 (48%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  +L+ G AY+ +L N LI++YV+ G    A   F     ++ VSW  +++G+
Sbjct: 514 RSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGF 573

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G    A   F +MV+ G   +     ++L AC   G
Sbjct: 574 VAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGG 612


>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 258/813 (31%), Positives = 422/813 (51%), Gaps = 118/813 (14%)

Query: 205 YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS 264
           Y + LS +   + + A +  +G      + + L+  + +  N  YAR +F+++ + ++V+
Sbjct: 5   YLAQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVA 64

Query: 265 MNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF--MIGKDS 322
              ++                               Y+  G I  +  +F    M  +D+
Sbjct: 65  ATTMLSA-----------------------------YSAAGNIKLAHQLFNATPMSIRDT 95

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG-WIMLGQQIHG 381
           VS+N MI+    +     A+  F  M+R G +   F+  S L + + +       QQ+H 
Sbjct: 96  VSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHC 155

Query: 382 EGLKLGLDSDVSVSNALLSLY---ADAGYLSRCL------KVFFLMP--EHDQVSWNSVI 430
           E  K G  S  SV NAL+S Y   A +  ++ C+      K+F   P    D+ +W ++I
Sbjct: 156 EVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTII 215

Query: 431 GAFADSEALVS------------------------------EAVKYYLDMRRAGWSPNGV 460
             +  ++ LV+                              EA      M   G   +  
Sbjct: 216 AGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEY 275

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANE----TTIENALLSCYGKCGEMDDCEKI 516
           T+ ++++AAS+  +  +G QVHA V++  V        ++ NAL++ Y +CG++ +  ++
Sbjct: 276 TYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRV 335

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMN----------LVWFMMQRGQRLDHF---- 562
           F +M  + D VSWN+++SG ++   + +A +          L W +M  G   + F    
Sbjct: 336 FDKMPVK-DLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEG 394

Query: 563 -----------------TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
                             +A  +++C+ + +L+ G ++H+  ++   +  + +G+AL+ M
Sbjct: 395 LKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITM 454

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
           YS+CG ++ A   F  MP  +  SWN+MI+  A+HGHG +A+ L+ +M  +  LPD +TF
Sbjct: 455 YSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITF 514

Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
           + +LSACSHAGLV EG  +F +M   YG+ P+ + +S ++DLL RAG   + +     MP
Sbjct: 515 LTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMP 574

Query: 726 ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDV 785
             P + IW  +L  C        ELG +AA+ L E+ PQ    Y+ L+NMYA+ G+W++V
Sbjct: 575 FEPGAPIWEALLAGCWIHG--NMELGIQAADRLLELMPQQDGTYISLSNMYAALGQWDEV 632

Query: 786 AKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
           A+ RK M+E  VKKE GCSW+ +++ VHVF+  D  HPE   +Y  L++L  +MR  GYV
Sbjct: 633 ARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLEQLVHEMRKLGYV 692

Query: 846 PQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKLP----IRIMKNLRVCGDCHSAF 901
           P TKF L D+E E KE  +S HSEK+AV + +    KLP    IR+ KNLR+CGDCH+AF
Sbjct: 693 PDTKFVLHDMESEQKEYALSTHSEKLAVVYGIM---KLPLGATIRVFKNLRICGDCHNAF 749

Query: 902 KFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           K+ISK+V REI++RD  RFHHF +G+CSC +YW
Sbjct: 750 KYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782



 Score =  187 bits (475), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 152/580 (26%), Positives = 262/580 (45%), Gaps = 102/580 (17%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVSGYTHKGMSNEACKMFKE 76
           D+    T+++ Y   G++  A +LF+  P   R++VS+  +++ ++H    + A ++F +
Sbjct: 61  DIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQ 120

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
           M R GF+ + +   SVL A             Q+HC V K        V N L++ Y SC
Sbjct: 121 MKRLGFVPDPFTFSSVLGALSLIADEE-THCQQLHCEVFKWGALSVPSVLNALMSCYVSC 179

Query: 137 LEST--------DCARRIFEEIET--RDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
             S           AR++F+E     RD  +W +II+ Y +  D ++  +L   M     
Sbjct: 180 ASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDH-- 237

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQ-------QILAMVKKAGLLSDLYVGSALVS 239
                         I  A+++++SG Y+ +        +L  +   G+  D Y  ++++S
Sbjct: 238 --------------IAVAWNAMISG-YVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVIS 282

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIR-----SGLFDMVAVG 294
             +  G F             N+            G++VH Y++R     SG F +++V 
Sbjct: 283 AASNAGLF-------------NI------------GRQVHAYVLRTVVQPSGHF-VLSVN 316

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN---------------------------- 326
           N L+ +Y +CG + ++R VF  M  KD VSWN                            
Sbjct: 317 NALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLL 376

Query: 327 ---TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
               MISGL QNG  EE +  F  M+ +GL   +++    ++SC+ LG +  GQQ+H + 
Sbjct: 377 TWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQI 436

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           ++LG DS +SV NAL+++Y+  G +     VF  MP  D VSWN++I A A     V +A
Sbjct: 437 IQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGV-QA 495

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLS 502
           ++ Y  M +    P+ +TF+ IL+A S   + K G H      + Y +  E    + L+ 
Sbjct: 496 IQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLID 555

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
              + G   + + +   M        W ++++G +IH  +
Sbjct: 556 LLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNM 595



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 142/584 (24%), Positives = 248/584 (42%), Gaps = 86/584 (14%)

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFE--EIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           D + +  +++ Y S   +   A ++F    +  RD +S+N++I+ +S   D  +  +LF 
Sbjct: 61  DIVAATTMLSAY-SAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFV 119

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           +M+R GF     P+ +TF S++  A S +       QQ+   V K G LS   V +AL+S
Sbjct: 120 QMKRLGF----VPDPFTFSSVL-GALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMS 174

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVG----- 294
            +    +               +V+   LM   RK            LFD    G     
Sbjct: 175 CYVSCAS-------------SPLVNSCVLMAAARK------------LFDEAPPGRRDEP 209

Query: 295 --NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
               ++  Y +   +  +R +   M    +V+WN MISG    G YEEA      M   G
Sbjct: 210 AWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLG 269

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD----VSVSNALLSLYADAGYL 408
           +    ++  S +S+ ++ G   +G+Q+H   L+  +       +SV+NAL++LY   G L
Sbjct: 270 IQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKL 329

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALV---------------------------- 440
               +VF  MP  D VSWN+++    ++  +                             
Sbjct: 330 VEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNG 389

Query: 441 --SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
              E +K +  M+  G  P    +   +A+ S       G Q+H+Q+I+    +  ++ N
Sbjct: 390 FGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGN 449

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
           AL++ Y +CG ++  + +F  M    D VSWN+MI+    +    +A+ L   M++    
Sbjct: 450 ALITMYSRCGLVEAADTVFLTMP-YVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDIL 508

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRAC--LEFDVVIGSALVDMYSKCGRIDYAS 616
            D  TF T+LSAC+    ++ G       +R C  +  +    S L+D+  + G    A 
Sbjct: 509 PDRITFLTILSACSHAGLVKEGRHYFDT-MRVCYGITPEEDHYSRLIDLLCRAGMFSEAK 567

Query: 617 RFFDLMPVR-NVYSWNSMISGYARHGH-------GDKALTLFSQ 652
              + MP       W ++++G   HG+        D+ L L  Q
Sbjct: 568 NVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQ 611



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 136/312 (43%), Gaps = 28/312 (8%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+   N +++  V    +  A+ +F EMP R+ ++W  ++SG    G   E  K+F +M 
Sbjct: 343 DLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMK 402

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC-- 136
             G     YA    + +C   G      G Q+H  +++        V N LI MY  C  
Sbjct: 403 LEGLEPCDYAYAGAIASCSVLG--SLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGL 460

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
           +E+ D    +F  +   D +SWN++I+  +Q G  +   +L+ +M +E     + P+  T
Sbjct: 461 VEAADT---VFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKE----DILPDRIT 513

Query: 197 FGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
           F ++++A   +  V  G +       M    G+  +    S L+    R G F  A+ + 
Sbjct: 514 FLTILSACSHAGLVKEGRHYFD---TMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVT 570

Query: 255 EQMIQKNVVSMNGLMEGRRKGKEVHGYL---IRSG--LFDMVAVGNG----LVNMYAKCG 305
           E M  +       + E    G  +HG +   I++   L +++   +G    L NMYA  G
Sbjct: 571 ESMPFEPGAP---IWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSNMYAALG 627

Query: 306 TIDDSRSVFRFM 317
             D+   V + M
Sbjct: 628 QWDEVARVRKLM 639



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H QI++ G    + + N LI +Y R G + +A  +F  MP  +SVSW  +++   
Sbjct: 428 NGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALA 487

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
             G   +A +++++M++   L +R    ++L AC   G
Sbjct: 488 QHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAG 525


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 248/698 (35%), Positives = 385/698 (55%), Gaps = 49/698 (7%)

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD---SRSVFRFMIGKDSVSWNTMISGLDQ 334
           +H  +I++GL +     + L+         D    + SVF  +   + + WNTM  G   
Sbjct: 6   IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +     A+  +  M   GL+ + ++    L SCA       GQQIHG  LKLG D D+ V
Sbjct: 66  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 125

Query: 395 SNALLSLY-------------------------------ADAGYLSRCLKVFFLMPEHDQ 423
             +L+S+Y                               A  GY++   K+F  +P  D 
Sbjct: 126 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 185

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSWN++I  +A++     EA++ + +M +    P+  T +++++A +  +  +LG QVH+
Sbjct: 186 VSWNAMISGYAET-GNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHS 244

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
            +  +   +   I NAL+  Y KCGE++    +F  +S  +D +SWN++I GY H  L  
Sbjct: 245 WIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLS-YKDVISWNTLIGGYTHMNLYK 303

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC------GVRACLEFDVV 597
           +A+ L   M++ G+  +  T  ++L ACA +  +E G  +H        GV         
Sbjct: 304 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR-- 361

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
             ++L+DMY+KCG I+ A + FD +  R++ SWN+MI G+A HG  + A  +FS+M+ + 
Sbjct: 362 --TSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNE 419

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
             PD +TFVG+LSACSH+G++D G   F+SM + Y + P+LE + CM+DLLG +G   + 
Sbjct: 420 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEA 479

Query: 718 EEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYA 777
           EE IN M + P+ +IW ++L AC        ELG   A  L ++EP+N  +YVLL+N+YA
Sbjct: 480 EEMINTMEMEPDGVIWCSLLKACKMHG--NVELGESYAQNLIKIEPKNPGSYVLLSNIYA 537

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
           + G+W +VAK R  + +  +KK  GCS + +   VH F+ GD+ HP    IY  L+E+  
Sbjct: 538 TAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 597

Query: 838 KMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGD 896
            + +AG+VP T   L ++E E KE  + +HSEK+A+AF +++      + I+KNLRVC +
Sbjct: 598 LLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRN 657

Query: 897 CHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CH A K ISKI  REI+ RD  RFHHF DG CSC DYW
Sbjct: 658 CHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695



 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 156/584 (26%), Positives = 262/584 (44%), Gaps = 75/584 (12%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI- 201
           A  +FE I+  +L+ WN++   ++   D +S   L+  M   G    L PN YTF  L+ 
Sbjct: 41  AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLG----LLPNCYTFPFLLK 96

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
           + A S         QQI   V K G   DLYV ++L+S + + G    ARK+F+Q   ++
Sbjct: 97  SCAKSKAFREG---QQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRD 153

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
           VVS   L+ G                             YA  G I  ++ +F  +  KD
Sbjct: 154 VVSYTALITG-----------------------------YASKGYIASAQKMFDEIPIKD 184

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            VSWN MISG  + G  +EA+  F  M +  +     +++S +S+CA    I LG+Q+H 
Sbjct: 185 VVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHS 244

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
                G  S++ + NAL+ LY   G +     +F  +   D +SWN++IG +     L  
Sbjct: 245 WIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMN-LYK 303

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY--NVANETTIENA 499
           EA+  + +M R+G SPN VT ++IL A +     ++G  +H  + K    VAN ++   +
Sbjct: 304 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTS 363

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  Y KCG+++  +++F  +  R    SWN+MI G+  +     A ++   M +     
Sbjct: 364 LIDMYAKCGDIEAAQQVFDSILNRSLS-SWNAMIFGFAMHGRANAAFDIFSRMRKNEIEP 422

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           D  TF  +LSAC+    L+ G                 I  ++ + Y    ++++     
Sbjct: 423 DDITFVGLLSACSHSGMLDLGRH---------------IFRSMKEDYKITPKLEHYGCMI 467

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           DL+                  G   +A  + + M+++   PD V +  +L AC   G V+
Sbjct: 468 DLL---------------GHSGLFKEAEEMINTMEME---PDGVIWCSLLKACKMHGNVE 509

Query: 680 EGFKHFKSMSQVYGLIP-QLEQFSCMVDLLGRAGELDKIEEFIN 722
            G  + +++ ++    P      S +    GR  E+ KI   +N
Sbjct: 510 LGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLN 553



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/451 (23%), Positives = 189/451 (41%), Gaps = 84/451 (18%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYV---RVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ H Q++K G     +  + LI   V       L  A  +F+ + + N + W  +  G+
Sbjct: 4   RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                   A  ++  M+  G L N Y    +L++C +     F+ G Q+H  VLK     
Sbjct: 64  ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKS--KAFREGQQIHGHVLKLGYDL 121

Query: 122 DGLVSNVLIAMYGSCLESTDC------------------------------ARRIFEEIE 151
           D  V   LI+MY       D                               A+++F+EI 
Sbjct: 122 DLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIP 181

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
            +D++SWN++IS Y++ G+     +LF  M +   R    P+E T  S+++A   S  + 
Sbjct: 182 IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVR----PDESTMVSVVSACAQS--AS 235

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             L +Q+ + +   G  S+L + +AL+  + + G    A  +FE +  K+V+S N L+ G
Sbjct: 236 IELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGG 295

Query: 272 RRK-----------------------------------------GKEVHGYLIR--SGLF 288
                                                       G+ +H Y+ +   G+ 
Sbjct: 296 YTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVA 355

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
           +  +    L++MYAKCG I+ ++ VF  ++ +   SWN MI G   +G    A   F  M
Sbjct: 356 NASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRM 415

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           R++ +   + + +  LS+C+  G + LG+ I
Sbjct: 416 RKNEIEPDDITFVGLLSACSHSGMLDLGRHI 446



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 196/416 (47%), Gaps = 32/416 (7%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV     LI  Y   G +ASA K+FDE+P ++ VSW  ++SGY   G + EA ++FKEM+
Sbjct: 153 DVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMM 212

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           +     +   + SV+ AC +   +  + G QVH  +       +  + N LI +Y  C E
Sbjct: 213 KTNVRPDESTMVSVVSACAQ--SASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE 270

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             + A  +FE +  +D+ISWN++I  Y+          LF  M R G      PN+ T  
Sbjct: 271 -VETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG----ESPNDVTML 325

Query: 199 SLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           S++ A     ++  G ++   I   +K  G+ +     ++L+  +A+ G+   A+++F+ 
Sbjct: 326 SILPACAHLGAIEIGRWIHVYINKRLK--GVANASSHRTSLIDMYAKCGDIEAAQQVFDS 383

Query: 257 MIQKNVVSMNGL-----MEGRRKGK-EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDS 310
           ++ +++ S N +     M GR     ++   + ++ +        GL++  +  G +D  
Sbjct: 384 ILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLG 443

Query: 311 RSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLIST 363
           R +FR M     I      +  MI  L  +G ++EA  ++N   M  DG++       S 
Sbjct: 444 RHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVI-----WCSL 498

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLKVFFLM 418
           L +C   G + LG+      +K  ++     S  LLS +YA AG  +   K+  L+
Sbjct: 499 LKACKMHGNVELGESYAQNLIK--IEPKNPGSYVLLSNIYATAGRWNEVAKIRALL 552


>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 248/645 (38%), Positives = 346/645 (53%), Gaps = 76/645 (11%)

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           L S L SC +     L + +H   +  GL  D  V+++LL  Y   G       VF  MP
Sbjct: 23  LPSALKSCPAQP---LARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMP 79

Query: 420 EHDQVSWNSVIGAFA---DSEA----------------------LVS---------EAVK 445
           E + V W+++I  ++   D+EA                      LVS         +AV 
Sbjct: 80  EKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVT 139

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
             + M   G+ P+       L+A        +G QVH  V+K     +  +  AL+  YG
Sbjct: 140 ALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYG 199

Query: 506 KCGEMDDCEKIF---------------------ARMSE-------------RRDEVSWNS 531
           KCG  D+  ++F                     A++SE               + VSW S
Sbjct: 200 KCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTS 259

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC 591
           +++  + N    +A++L   M   G   +  T   VL A A+VA L  G   H   +R  
Sbjct: 260 IVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKG 319

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
              DV +GSALVDMY+KCG+  +A   FD MP RNV SWN+MI GYA HG    A+ LF 
Sbjct: 320 FLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFC 379

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRA 711
            M+     PD VTF  VL ACS AGL +EG ++F  M Q +G+ P++E ++CMV LLGR+
Sbjct: 380 SMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRS 439

Query: 712 GELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYV 770
           G+LD+  + IN+MP  P+S IW ++LG+C    N    E+   AA  LF++EP NA NYV
Sbjct: 440 GKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEV---AAEKLFQLEPGNAGNYV 496

Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
           LL+N+YAS   W+ V + R  MK   +KKE GCSW+ +K+ VH+ +AGD SHP    I E
Sbjct: 497 LLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAITE 556

Query: 831 KLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMK 889
           KL +L  +M   G+ P   F L D+E + K+++++ HSEK+AVA  +++     P+R++K
Sbjct: 557 KLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVALGLISTRPGTPLRVIK 616

Query: 890 NLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           NLR+CGDCH A KFIS    REI +RD+NRFHHF DGKCSCGDYW
Sbjct: 617 NLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGDYW 661



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/490 (22%), Positives = 207/490 (42%), Gaps = 78/490 (15%)

Query: 82  FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD 141
           F  + + L S L++C             +H   + S    D  V++ L+  Y   L +T 
Sbjct: 16  FPPDPHLLPSALKSC-----PAQPLARALHAAAVVSGLAEDPFVASSLLHSYIR-LGATG 69

Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
            AR +F+ +  ++++ W+++I+ YS RGD  + + L  +M+  G    ++PN  T+  L+
Sbjct: 70  AARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAG----VEPNVITWNGLV 125

Query: 202 TAAYSSVLSGSYLLQQILAMVK--KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           +    S       L  + A+V+    G   D    S  +S                    
Sbjct: 126 SGLNRS----GRALDAVTALVRMHSEGFFPDATGVSCALSAV------------------ 163

Query: 260 KNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                  G ++    GK+VHGY++++G      V   L++MY KCG  D+   VF     
Sbjct: 164 -------GDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSH 216

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNF----C----------------------------- 346
            D  S N +++GL +N    EA++ F    C                             
Sbjct: 217 MDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDL 276

Query: 347 --AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
              M+  G+  ++ ++   L + A++  +M G+  H   L+ G   DV V +AL+ +YA 
Sbjct: 277 FRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAK 336

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
            G       +F  MP  + VSWN++IG +A      + AV+ +  M++    P+ VTF  
Sbjct: 337 CGKARHARTIFDAMPSRNVVSWNAMIGGYA-MHGDAANAVQLFCSMQKCKQKPDLVTFTC 395

Query: 465 ILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           +L A S   + + G +   ++ + + ++        +++  G+ G++D+   +   M   
Sbjct: 396 VLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFE 455

Query: 524 RDEVSWNSMI 533
            D   W S++
Sbjct: 456 PDSCIWGSLL 465



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 147/335 (43%), Gaps = 73/335 (21%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H   +  G A D F+ ++L++ Y+R+G   +A  +FD MP++N V W+ +++GY+ 
Sbjct: 36  ARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSA 95

Query: 64  KGMSNEACKMFKEMVRAGFL------------LNRY-----ALGSVLRACQE-------- 98
           +G +  A  + ++M  AG              LNR      A+ +++R   E        
Sbjct: 96  RGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATG 155

Query: 99  --CGPSGF------KFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCAR------ 144
             C  S          G QVH  V+K+    D  V   LI MYG C  + +  R      
Sbjct: 156 VSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESS 215

Query: 145 ------------------------RIFEEIETR----DLISWNSIISVYSQRGDTISVFK 176
                                    +F E   R    +++SW SI++   Q G  +    
Sbjct: 216 HMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVD 275

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
           LF  MQ  G    ++PN  T    +  A+++V +  +        ++K G L D+YVGSA
Sbjct: 276 LFRTMQSIG----VEPNSVTI-PCVLPAFANVAALMHGRSAHCFSLRK-GFLHDVYVGSA 329

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           LV  +A+ G   +AR IF+ M  +NVVS N ++ G
Sbjct: 330 LVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGG 364



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 11/196 (5%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDR----NSVSWACIVSGYTHKGMSNEACKMF 74
           DV  CN L+    R   ++ A  LF E   R    N VSW  IV+     G   EA  +F
Sbjct: 218 DVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLF 277

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
           + M   G   N   +  VL A      +    G   HC  L+     D  V + L+ MY 
Sbjct: 278 RTMQSIGVEPNSVTIPCVLPAFANV--AALMHGRSAHCFSLRKGFLHDVYVGSALVDMYA 335

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
            C ++   AR IF+ + +R+++SWN++I  Y+  GD  +  +LF  MQ    +   KP+ 
Sbjct: 336 KCGKARH-ARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQ----KCKQKPDL 390

Query: 195 YTFGSLITAAYSSVLS 210
            TF  ++ A   + L+
Sbjct: 391 VTFTCVLGACSQAGLT 406



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 48/93 (51%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   L+ GF +DV++ + L+++Y + G    A  +FD MP RN VSW  ++ GY   G +
Sbjct: 312 HCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDA 371

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
             A ++F  M +     +      VL AC + G
Sbjct: 372 ANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAG 404


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 250/699 (35%), Positives = 387/699 (55%), Gaps = 51/699 (7%)

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD---SRSVFRFMIGKDSVSWNTMISGLDQ 334
           +H  +I++GL +     + L+         D    + SVF  +   + + WNTM  G   
Sbjct: 21  IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 80

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +     A+  +  M   GL+ + ++    L SCA       GQQIHG  LKLG D D+ V
Sbjct: 81  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 140

Query: 395 SNALLSLY-------------------------------ADAGYLSRCLKVFFLMPEHDQ 423
             +L+S+Y                               A  GY++   K+F  +P  D 
Sbjct: 141 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 200

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSWN++I  +A++     EA++ + +M +    P+  T +++++A +  +  +LG QVH+
Sbjct: 201 VSWNAMISGYAET-GNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHS 259

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
            +  +   +   I NAL+  Y KCGE++    +F  +S  +D +SWN++I GY H  L  
Sbjct: 260 WIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLS-YKDVISWNTLIGGYTHMNLYK 318

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC------GVRACLEFDVV 597
           +A+ L   M++ G+  +  T  ++L ACA +  +E G  +H        GV         
Sbjct: 319 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR-- 376

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
             ++L+DMY+KCG I+ A + FD +  R++ SWN+MI G+A HG  + A  +FS+M+ + 
Sbjct: 377 --TSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNE 434

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
             PD +TFVG+LSACSH+G++D G   F+SM + Y + P+LE + CM+DLLG +G   + 
Sbjct: 435 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEA 494

Query: 718 EEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMY 776
           EE IN M + P+ +IW ++L AC   AN    ELG   A  L ++EP+N  +YVLL+N+Y
Sbjct: 495 EEMINTMEMEPDGVIWCSLLKACKMYAN---VELGESYAQNLIKIEPKNPGSYVLLSNIY 551

Query: 777 ASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELN 836
           A+ G+W +VAK R  + +  +KK  GCS + +   VH F+ GD+ HP    IY  L+E+ 
Sbjct: 552 ATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEME 611

Query: 837 QKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCG 895
             + +AG+VP T   L ++E E KE  + +HSEK+A+AF +++      + I+KNLRVC 
Sbjct: 612 VLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCR 671

Query: 896 DCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +CH A K ISKI  REI+ RD  RFHHF DG CSC DYW
Sbjct: 672 NCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 155/584 (26%), Positives = 261/584 (44%), Gaps = 75/584 (12%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI- 201
           A  +FE I+  +L+ WN++   ++   D +S   L+  M   G    L PN YTF  L+ 
Sbjct: 56  AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLG----LLPNCYTFPFLLK 111

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
           + A S         QQI   V K G   DLYV ++L+S + + G    ARK+F+Q   ++
Sbjct: 112 SCAKSKAFREG---QQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRD 168

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
           VVS   L+ G                             YA  G I  ++ +F  +  KD
Sbjct: 169 VVSYTALITG-----------------------------YASKGYIASAQKMFDEIPIKD 199

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            VSWN MISG  + G  +EA+  F  M +  +     +++S +S+CA    I LG+Q+H 
Sbjct: 200 VVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHS 259

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
                G  S++ + NAL+ LY   G +     +F  +   D +SWN++IG +     L  
Sbjct: 260 WIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMN-LYK 318

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY--NVANETTIENA 499
           EA+  + +M R+G SPN VT ++IL A +     ++G  +H  + K    VAN ++   +
Sbjct: 319 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTS 378

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  Y KCG+++  +++F  +  R    SWN+MI G+  +     A ++   M +     
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSILNRSLS-SWNAMIFGFAMHGRANAAFDIFSRMRKNEIEP 437

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           D  TF  +LSAC+    L+ G                 I  ++ + Y    ++++     
Sbjct: 438 DDITFVGLLSACSHSGMLDLGRH---------------IFRSMKEDYKITPKLEHYGCMI 482

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           DL+                  G   +A  + + M+++   PD V +  +L AC     V+
Sbjct: 483 DLL---------------GHSGLFKEAEEMINTMEME---PDGVIWCSLLKACKMYANVE 524

Query: 680 EGFKHFKSMSQVYGLIP-QLEQFSCMVDLLGRAGELDKIEEFIN 722
            G  + +++ ++    P      S +    GR  E+ KI   +N
Sbjct: 525 LGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLN 568



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 131/596 (21%), Positives = 239/596 (40%), Gaps = 121/596 (20%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYV---RVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ H Q++K G     +  + LI   V       L  A  +F+ + + N + W  +  G+
Sbjct: 19  RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 78

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                   A  ++  M+  G L N Y    +L++C +     F+ G Q+H  VLK     
Sbjct: 79  ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKS--KAFREGQQIHGHVLKLGYDL 136

Query: 122 DGLVSNVLIAMYGSCLESTDC------------------------------ARRIFEEIE 151
           D  V   LI+MY       D                               A+++F+EI 
Sbjct: 137 DLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIP 196

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
            +D++SWN++IS Y++ G+     +LF  M +   R    P+E T  S+++A   S  + 
Sbjct: 197 IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVR----PDESTMVSVVSACAQS--AS 250

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             L +Q+ + +   G  S+L + +AL+  + + G    A  +FE +  K+V+S N L+ G
Sbjct: 251 IELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGG 310

Query: 272 RRK-----------------------------------------GKEVHGYLIR--SGLF 288
                                                       G+ +H Y+ +   G+ 
Sbjct: 311 YTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVA 370

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
           +  +    L++MYAKCG I+ ++ VF  ++ +   SWN MI G   +G    A   F  M
Sbjct: 371 NASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRM 430

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           R++ +   + + +  LS+C+  G + LG+ I        +  D  ++  L         L
Sbjct: 431 RKNEIEPDDITFVGLLSACSHSGMLDLGRHIFR-----SMKEDYKITPKLEHYGCMIDLL 485

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
                                 G F ++E +++      ++M      P+GV + ++L A
Sbjct: 486 GHS-------------------GLFKEAEEMINT-----MEME-----PDGVIWCSLLKA 516

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLS-CYGKCGEMDDCEKIFARMSER 523
              ++  +LG      +IK    N  +    LLS  Y   G  ++  KI A ++++
Sbjct: 517 CKMYANVELGESYAQNLIKIEPKNPGSY--VLLSNIYATAGRWNEVAKIRALLNDK 570


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 252/697 (36%), Positives = 389/697 (55%), Gaps = 46/697 (6%)

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD---SRSVFRFMIGKDSVSWNTMISGLDQ 334
            H  ++++GL +     + L+ +       D    + SVF      + + WNTM+ GL  
Sbjct: 1   THAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLAS 60

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +      +  +  M   G + + ++    L SCA       G+QIH + +KLG + D   
Sbjct: 61  SSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120

Query: 395 SNALLSLYA------DA--------------------GYLSR-----CLKVFFLMPEHDQ 423
             +L+S+YA      DA                    GY SR       KVF  + E D 
Sbjct: 121 HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDV 180

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSWN++I  + ++     EA++ + +M R    P+  T +++L+A +     +LG ++H 
Sbjct: 181 VSWNAMITGYVENCGY-EEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHT 239

Query: 484 QVIKYN-VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
            V  ++   +   I NA +  Y KCG+++    +F  +S  +D VSWN++I GY H  L 
Sbjct: 240 LVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLS-CKDVVSWNTLIGGYTHMNLY 298

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
            +A+ L   M++ G+  +  T  +VL ACA +  ++ G  +H   +   L+  V  GSAL
Sbjct: 299 KEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVY-IDKRLK-GVTNGSAL 356

Query: 603 ----VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
               +DMY+KCG I+ A + F+ M  +++ SWN+MI G+A HG  + A  LFS+M+ +G 
Sbjct: 357 RTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGI 416

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
            PD +T VG+LSACSH+GL+D G   FKS++Q Y + P+LE + CM+DLLG AG   + E
Sbjct: 417 EPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAE 476

Query: 719 EFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYAS 778
           E I+ MP+ P+ +IW ++L AC        EL    A  L E+EP+N+ +YVLL+N+YA+
Sbjct: 477 EIIHMMPMEPDGVIWCSLLKACKMHG--NLELAESFAQKLMEIEPENSGSYVLLSNIYAT 534

Query: 779 GGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQK 838
            G+WEDVA+ R+ +    +KK  GCS + +   VH F+ GD+ HP+   IY  L+E++  
Sbjct: 535 AGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVL 594

Query: 839 MRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDC 897
           + +AG+VP T   L ++E E KE  + +HSEK+A+AF +++      + ++KNLRVC +C
Sbjct: 595 LEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNC 654

Query: 898 HSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           H A K ISKI  REIV RD  RFHHF DG CSC DYW
Sbjct: 655 HEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 691



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/509 (28%), Positives = 234/509 (45%), Gaps = 50/509 (9%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI- 201
           A  +FE  +  +L+ WN+++   +   D +S  +++ RM   G      PN YTF  L+ 
Sbjct: 36  AVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGH----VPNAYTFPFLLK 91

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
           + A S         +QI A V K G   D Y  ++L+S +AR G    ARK+F+   Q++
Sbjct: 92  SCAKSKTFEEG---RQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRD 148

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
           VVS   L+ G                             YA  G +  +R VF  +  +D
Sbjct: 149 VVSCTALITG-----------------------------YASRGDVRSARKVFDXITERD 179

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            VSWN MI+G  +N  YEEA+  F  M R  +     +L+S LS+CA  G I LG++IH 
Sbjct: 180 VVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHT 239

Query: 382 -EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
                 G  S + + NA + LY+  G +     +F  +   D VSWN++IG +     L 
Sbjct: 240 LVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMN-LY 298

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY--NVANETTIEN 498
            EA+  + +M R+G SPN VT +++L A +      +G  +H  + K    V N + +  
Sbjct: 299 KEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRT 358

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
           +L+  Y KCG+++   ++F  M  +    SWN+MI G+  +     A +L   M + G  
Sbjct: 359 SLIDMYAKCGDIEAAHQVFNSMMHKSLS-SWNAMIFGFAMHGRANAAFDLFSRMRKNGIE 417

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDY 614
            D  T   +LSAC+    L+ G  +     +   ++++         ++D+    G    
Sbjct: 418 PDDITLVGLLSACSHSGLLDLGRHIFKSVTQ---DYNITPKLEHYGCMIDLLGHAGLFKE 474

Query: 615 ASRFFDLMPVR-NVYSWNSMISGYARHGH 642
           A     +MP+  +   W S++     HG+
Sbjct: 475 AEEIIHMMPMEPDGVIWCSLLKACKMHGN 503



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 121/502 (24%), Positives = 211/502 (42%), Gaps = 83/502 (16%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYV---RVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           H Q++K G     +  + L+ + V       L  A  +F+   + N + W  ++ G    
Sbjct: 2   HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
                  +M+  MV  G + N Y    +L++C +     F+ G Q+H  V+K     D  
Sbjct: 62  SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAK--SKTFEEGRQIHAQVMKLGCELDRY 119

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ-- 182
               LI+MY       D AR++F+    RD++S  ++I+ Y+ RGD  S  K+F  +   
Sbjct: 120 AHTSLISMYARNGRLED-ARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITER 178

Query: 183 -------------------------REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL-Q 216
                                    +E  R +++P+E   G+L++   +   SGS  L +
Sbjct: 179 DVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDE---GTLVSVLSACAQSGSIELGR 235

Query: 217 QILAMV-KKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK- 274
           +I  +V    G  S L + +A +  +++ G+   A  +FE +  K+VVS N L+ G    
Sbjct: 236 EIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHM 295

Query: 275 ----------------------------------------GKEVHGYLIR--SGLFDMVA 292
                                                   G+ +H Y+ +   G+ +  A
Sbjct: 296 NLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSA 355

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           +   L++MYAKCG I+ +  VF  M+ K   SWN MI G   +G    A   F  MR++G
Sbjct: 356 LRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNG 415

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSLYADAGYLSRC 411
           +   + +L+  LS+C+  G + LG+ I     +   +   +     ++ L   AG     
Sbjct: 416 IEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEA 475

Query: 412 LKVFFLMP-EHDQVSWNSVIGA 432
            ++  +MP E D V W S++ A
Sbjct: 476 EEIIHMMPMEPDGVIWCSLLKA 497



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 193/405 (47%), Gaps = 33/405 (8%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV  C  LI  Y   GD+ SA K+FD + +R+ VSW  +++GY       EA ++FKEM+
Sbjct: 148 DVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMM 207

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL-VSNVLIAMYGSCL 137
           R     +   L SVL AC + G    + G ++H LV   +     L + N  I +Y  C 
Sbjct: 208 RTNVRPDEGTLVSVLSACAQSG--SIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCG 265

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
           +  + A  +FE +  +D++SWN++I  Y+          LF  M R G      PN+ T 
Sbjct: 266 D-VEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSG----ESPNDVTM 320

Query: 198 GSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
            S++ A     ++  G ++   I   +K  G+ +   + ++L+  +A+ G+   A ++F 
Sbjct: 321 LSVLPACAHLGAIDIGRWIHVYIDKRLK--GVTNGSALRTSLIDMYAKCGDIEAAHQVFN 378

Query: 256 QMIQKNVVSMNGL-----MEGRRKGK-EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
            M+ K++ S N +     M GR     ++   + ++G+        GL++  +  G +D 
Sbjct: 379 SMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDL 438

Query: 310 SRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLIS 362
            R +F+ +    +++     +  MI  L   G ++EA  I++   M  DG++       S
Sbjct: 439 GRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVI-----WCS 493

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAG 406
            L +C   G + L +    + ++  ++ + S S  LLS +YA AG
Sbjct: 494 LLKACKMHGNLELAESFAQKLME--IEPENSGSYVLLSNIYATAG 536



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 151/321 (47%), Gaps = 28/321 (8%)

Query: 14  HGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKM 73
           HGF   + + N  I +Y + GD+  AS LF+ +  ++ VSW  ++ GYTH  +  EA  +
Sbjct: 245 HGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLL 304

Query: 74  FKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ--TFDGLVSNVLIA 131
           F+EM+R+G   N   + SVL AC   G      G  +H  + K  +  T    +   LI 
Sbjct: 305 FQEMLRSGESPNDVTMLSVLPACAHLG--AIDIGRWIHVYIDKRLKGVTNGSALRTSLID 362

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY  C +  + A ++F  +  + L SWN++I  ++  G   + F LFSRM++ G    ++
Sbjct: 363 MYAKCGD-IEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNG----IE 417

Query: 192 PNEYTFGSLITA-AYSSVLS-GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
           P++ T   L++A ++S +L  G ++ + +    +   +   L     ++      G F  
Sbjct: 418 PDDITLVGLLSACSHSGLLDLGRHIFKSV---TQDYNITPKLEHYGCMIDLLGHAGLFKE 474

Query: 250 ARKIFEQM-IQKNVVSMNGLMEGRRKGKEVHGYL-----IRSGLFDMVAVGNG----LVN 299
           A +I   M ++ + V    L+    K  ++HG L         L ++    +G    L N
Sbjct: 475 AEEIIHMMPMEPDGVIWCSLL----KACKMHGNLELAESFAQKLMEIEPENSGSYVLLSN 530

Query: 300 MYAKCGTIDDSRSVFRFMIGK 320
           +YA  G  +D   +   + GK
Sbjct: 531 IYATAGRWEDVARIREVLNGK 551


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 235/609 (38%), Positives = 346/609 (56%), Gaps = 6/609 (0%)

Query: 328 MISGLDQNGCYEEAIMNFCAMRR-DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
           MISG  +N C+E++I  F  M   +G      ++I+ L + A L  + LG QI    +K 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
           G  S VS+   L+SL++  G +     +F  + + D +S N++I  F        ++V+ 
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFT-CNGETEDSVRL 119

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
           + ++  +G   +  T + ++   S F    L + +H   +K  + + +++  AL + Y +
Sbjct: 120 FKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCR 179

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
             EM    ++F   +E+    SWN+MISG   N L   A++L   M +     +  T  +
Sbjct: 180 LNEMIFARQLFDESAEK-TLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTS 238

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           +LSACA +  L  G  VH+       E +V + +AL+DMY+KCG I  A   FDLMP +N
Sbjct: 239 ILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKN 298

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
             +WN+MISGY  HGHG +AL LF  M      P  +TF+ VL ACSHAGLV EG   F 
Sbjct: 299 EVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFH 358

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
           +M   +G  P  E ++CMVD+LGRAG+L K  EFI  MP+ P   +W  +LGAC     +
Sbjct: 359 TMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIH--K 416

Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
            T L   A+  LFE++P+N   YVL++N+Y+   K+   A  R+  K+  + K  GC+ +
Sbjct: 417 DTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLI 476

Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSY 866
            +    HVF +GD+SHP+   IY +L +L  KM +AG+  +T   L DLE E KE  +  
Sbjct: 477 EIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKV 536

Query: 867 HSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFND 925
           HSEK+A+AF +++      IRI+KNLRVC DCH+  KF+SKI  R IV+RD+NRFHHF D
Sbjct: 537 HSEKLAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKD 596

Query: 926 GKCSCGDYW 934
           G CSCGDYW
Sbjct: 597 GLCSCGDYW 605



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 210/451 (46%), Gaps = 25/451 (5%)

Query: 237 LVSGFARLGNFYYARKIFEQMIQKN-----------VVSMNGLMEGRRKGKEVHGYLIRS 285
           ++SGF +   F  + ++F  M+  N           V+     ++  + G ++    I+ 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
           G +  V++  GL+++++KCG ++ +R +F  +  KD +S N MISG   NG  E+++  F
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             +   G   S+ +++  +   +  G   L   IHG  +KLG+ S  SVS AL ++Y   
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
             +    ++F    E    SWN++I        L   A+  +  M++   +PN VT  +I
Sbjct: 181 NEMIFARQLFDESAEKTLASWNAMISG-CTQNGLTDAAISLFQTMQKNNVNPNPVTVTSI 239

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           L+A +      LG  VH+ +      +   +  AL+  Y KCG +    ++F  M E ++
Sbjct: 240 LSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPE-KN 298

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG----- 580
           EV+WN+MISGY  +    +A+ L + M+    +    TF +VL AC+    ++ G     
Sbjct: 299 EVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFH 358

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYAR 639
             VH  G     E      + +VD+  + G++  A  F   MPV      W +++   A 
Sbjct: 359 TMVHDFGFEPLAEHY----ACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLG--AC 412

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
             H D  L   +  KL    P+++ +  ++S
Sbjct: 413 MIHKDTNLAHVASEKLFELDPENIGYYVLMS 443



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 166/367 (45%), Gaps = 44/367 (11%)

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG----- 271
           QIL +  K G  S + + + L+S F++ G    AR +F ++ +K+++S N ++ G     
Sbjct: 52  QILCLAIKCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNG 111

Query: 272 -----RRKGKE-------------------------------VHGYLIRSGLFDMVAVGN 295
                 R  KE                               +HG+ ++ G+    +V  
Sbjct: 112 ETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVST 171

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMS 355
            L  +Y +   +  +R +F     K   SWN MISG  QNG  + AI  F  M+++ +  
Sbjct: 172 ALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNP 231

Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
           +  ++ S LS+CA +G + LG+ +H        +S+V VS AL+ +YA  G ++   ++F
Sbjct: 232 NPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELF 291

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
            LMPE ++V+WN++I  +        EA+K + DM  +   P G+TF+++L A S   + 
Sbjct: 292 DLMPEKNEVTWNAMISGYG-LHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLV 350

Query: 476 KLGHQV-HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           K G  + H  V  +           ++   G+ G++    +    M        W +++ 
Sbjct: 351 KEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLG 410

Query: 535 G-YIHNE 540
              IH +
Sbjct: 411 ACMIHKD 417



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 189/426 (44%), Gaps = 65/426 (15%)

Query: 57  IVSGYTHKGMSNEACKMFKEMVRA-GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVL 115
           ++SG+       ++ ++F +MV   G   +   + +VL A  E      K GMQ+ CL +
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAEL--QELKLGMQILCLAI 58

Query: 116 KSNQTFDGLVSNV-----LIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD 170
           K      G  S+V     LI+++  C E  + AR +F EI  +DLIS N++IS ++  G+
Sbjct: 59  KC-----GFYSHVSLLTGLISLFSKCGE-VEIARLLFGEIRKKDLISCNAMISGFTCNGE 112

Query: 171 TISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD 230
           T    +LF  +   G R S      T   LI   YS     SYL   I     K G++S 
Sbjct: 113 TEDSVRLFKELLSSGERVS----SSTIVGLI-PVYSP-FGHSYLCNCIHGFCVKLGIVSH 166

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---------------- 274
             V +AL + + RL    +AR++F++  +K + S N ++ G  +                
Sbjct: 167 SSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQK 226

Query: 275 -------------------------GKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTID 308
                                    G+ VH  LI+S  F+  V V   L++MYAKCG+I 
Sbjct: 227 NNVNPNPVTVTSILSACAQIGALSLGEWVHS-LIKSNRFESNVYVSTALIDMYAKCGSIT 285

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
            +R +F  M  K+ V+WN MISG   +G  +EA+  F  M    +  +  + +S L +C+
Sbjct: 286 VARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACS 345

Query: 369 SLGWIMLGQQI-HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSW 426
             G +  G  I H      G +        ++ +   AG L + L+    MP E     W
Sbjct: 346 HAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVW 405

Query: 427 NSVIGA 432
            +++GA
Sbjct: 406 GALLGA 411



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 156/316 (49%), Gaps = 21/316 (6%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           +K GF   V L   LI+++ + G++  A  LF E+  ++ +S   ++SG+T  G + ++ 
Sbjct: 58  IKCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSV 117

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQ-VHCLVLKSNQTFDGLVSNVLI 130
           ++FKE++ +G    R +  +++       P G  +    +H   +K        VS  L 
Sbjct: 118 RLFKELLSSG---ERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALT 174

Query: 131 AMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSL 190
            +Y   L     AR++F+E   + L SWN++IS  +Q G T +   LF  MQ+     ++
Sbjct: 175 TVYCR-LNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKN----NV 229

Query: 191 KPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
            PN  T  S+++A   + +    L + + +++K     S++YV +AL+  +A+ G+   A
Sbjct: 230 NPNPVTVTSILSAC--AQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVA 287

Query: 251 RKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA-----VGNGLVNMYAKC- 304
           R++F+ M +KN V+ N ++ G   G   HG       +DM++      G   +++   C 
Sbjct: 288 RELFDLMPEKNEVTWNAMISGY--GLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACS 345

Query: 305 --GTIDDSRSVFRFMI 318
             G + +   +F  M+
Sbjct: 346 HAGLVKEGDGIFHTMV 361



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 50/93 (53%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  I  + F  +V++   LI++Y + G +  A +LFD MP++N V+W  ++SGY   G  
Sbjct: 256 HSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHG 315

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            EA K+F +M+ +          SVL AC   G
Sbjct: 316 QEALKLFYDMLSSSVKPTGLTFLSVLYACSHAG 348


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 247/698 (35%), Positives = 384/698 (55%), Gaps = 49/698 (7%)

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD---SRSVFRFMIGKDSVSWNTMISGLDQ 334
           +H  +I++GL +     + L+         D    + SVF  +     + WNTM  G   
Sbjct: 21  IHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGHAL 80

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +     A+  +  M   GL+ ++++    L SCA       GQQ+HG+ LK G D D+ +
Sbjct: 81  SSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYI 140

Query: 395 SNALLSLYAD--------------------------AGYLSR-----CLKVFFLMPEHDQ 423
             +L+S+Y                             GY SR       K+F  +P  D 
Sbjct: 141 HTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDV 200

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSWN+ I  +A++     EA++ +  M +    P+  T + +L+A +     +LG QVH+
Sbjct: 201 VSWNAXISGYAET-GNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHS 259

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
            +  +       I NAL+  Y KCGE++    +F  +S + D +SWN++I GY H  L  
Sbjct: 260 WINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNK-DVISWNTLIGGYTHMNLYK 318

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC------GVRACLEFDVV 597
           +A+ L   M++ G++ +  T  ++LSACA +  ++ G  +H        GV         
Sbjct: 319 EALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASS---- 374

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           + ++L+DMY+KCG I+ A + FD M  R++ SWN+MI G+A HG  + A  +FS+M+ +G
Sbjct: 375 LRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNG 434

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
             PD +TFVG+LSACSH+G++D G   F+SM++ Y L+P+LE + CM+DL G +G   + 
Sbjct: 435 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEA 494

Query: 718 EEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYA 777
           E+ IN M + P+ +IW ++L AC        ELG   A  L ++EP+N  +YVLL+N+YA
Sbjct: 495 EKMINTMEMEPDGVIWCSLLKACKMHG--NVELGESYAQNLIKIEPENPGSYVLLSNIYA 552

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
           +  +W +VAK R  + +  +KK  GCS + +   VH F+ GD+ HP    IY  L+E+  
Sbjct: 553 TAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 612

Query: 838 KMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGD 896
            + +AG+VP T   L ++E E KE  + +HSEK+A+AF +++      + I+KNLRVC +
Sbjct: 613 LLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRN 672

Query: 897 CHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CH A K ISKI  REI+ RD  RFHHF DG+CSC DYW
Sbjct: 673 CHEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710



 Score =  193 bits (490), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 159/618 (25%), Positives = 267/618 (43%), Gaps = 107/618 (17%)

Query: 76  EMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS 135
           +M++ G     YAL  +L  C                 VL  +  FDGL           
Sbjct: 24  QMIKTGLHNTNYALSKLLEXC-----------------VLSPH--FDGL----------- 53

Query: 136 CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
                  A  +F+ I+   L+ WN++   ++   D +S  KL+  M   G    L PN Y
Sbjct: 54  -----PYAISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLG----LLPNSY 104

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
           TF  L+ +   S        QQ+   V K G   DLY+ ++L+S + + G    A+K+ +
Sbjct: 105 TFPFLLKSCAKSXAFKEG--QQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXD 162

Query: 256 QMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
           +   ++VVS   L+ G                             YA  G I+ +  +F 
Sbjct: 163 KSSHRDVVSYTALITG-----------------------------YASRGXIESAHKMFD 193

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            +  KD VSWN  ISG  + G Y+EA+  F  M +  +     ++++ LS+CA  G I L
Sbjct: 194 EIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIEL 253

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G+Q+H      G   ++ + NAL+ LY+  G L     +F  +   D +SWN++IG +  
Sbjct: 254 GRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTH 313

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY--NVANE 493
              L  EA+  + DM R+G  PN VT ++IL+A +      +G  +H  + K    V N 
Sbjct: 314 MN-LYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNA 372

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM 553
           +++  +L+  Y KCG+++  +++F  M  R    SWN+MI G+  +     A ++   M 
Sbjct: 373 SSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLS-SWNAMIFGFAMHGRANAAFDIFSRMR 431

Query: 554 QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID 613
           + G   D  TF  +LSAC+    L+ G  +                              
Sbjct: 432 KNGIEPDDITFVGLLSACSHSGMLDLGRHI----------------------------FR 463

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
             +R + LMP   +  +  MI      G   +A  + + M+++   PD V +  +L AC 
Sbjct: 464 SMTRDYKLMP--KLEHYGCMIDLXGHSGLFKEAEKMINTMEME---PDGVIWCSLLKACK 518

Query: 674 HAGLVDEGFKHFKSMSQV 691
             G V+ G  + +++ ++
Sbjct: 519 MHGNVELGESYAQNLIKI 536



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 120/507 (23%), Positives = 212/507 (41%), Gaps = 88/507 (17%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYV---RVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ H Q++K G     +  + L+   V       L  A  +FD + +   + W  +  G+
Sbjct: 19  RIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGH 78

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                   A K++  MV  G L N Y    +L++C +     FK G Q+H  VLK     
Sbjct: 79  ALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKS--XAFKEGQQLHGQVLKFGFDL 136

Query: 122 DGLVSNVLIAMY--GSCLEST----------------------------DCARRIFEEIE 151
           D  +   LI+MY     LE                              + A ++F+EI 
Sbjct: 137 DLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIP 196

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
            +D++SWN+ IS Y++ G+     +LF +M +   R    P+E T  ++++A      SG
Sbjct: 197 VKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVR----PDESTMVTVLSACAQ---SG 249

Query: 212 SYLL-QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
           S  L +Q+ + +   G   +L + +AL+  +++ G    A  +F+ +  K+V+S N L+ 
Sbjct: 250 SIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIG 309

Query: 271 GRRK-----------------------------------------GKEVHGYLIR--SGL 287
           G                                            G+ +H Y+ +   G+
Sbjct: 310 GYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGV 369

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
            +  ++   L++MYAKCG I+ ++ VF  M+ +   SWN MI G   +G    A   F  
Sbjct: 370 TNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSR 429

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSLYADAG 406
           MR++G+   + + +  LS+C+  G + LG+ I     +   L   +     ++ L   +G
Sbjct: 430 MRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSG 489

Query: 407 YLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                 K+   M  E D V W S++ A
Sbjct: 490 LFKEAEKMINTMEMEPDGVIWCSLLKA 516



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 195/423 (46%), Gaps = 62/423 (14%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDL------------------------- 36
           K+ +  H Q+LK GF  D+++  +LI++YV+ G L                         
Sbjct: 120 KEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGY 179

Query: 37  ------ASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
                  SA K+FDE+P ++ VSW   +SGY   G   EA ++FK+M++     +   + 
Sbjct: 180 ASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMV 239

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE-STDCARRIFEE 149
           +VL AC + G    + G QVH  +       +  + N LI +Y  C E  T C   +F+ 
Sbjct: 240 TVLSACAQSG--SIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACG--LFQG 295

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA--YSS 207
           +  +D+ISWN++I  Y+          LF  M R G     KPN+ T  S+++A     +
Sbjct: 296 LSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSG----EKPNDVTMLSILSACAHLGA 351

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
           +  G ++   I   +K  G+ +   + ++L+  +A+ G+   A+++F+ M+ +++ S N 
Sbjct: 352 IDIGRWIHVYIDKRLK--GVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNA 409

Query: 268 L-----MEGRRKGK-EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
           +     M GR     ++   + ++G+        GL++  +  G +D  R +FR M    
Sbjct: 410 MIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDY 469

Query: 322 SV-----SWNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
            +      +  MI     +G ++EA  ++N   M  DG++       S L +C   G + 
Sbjct: 470 KLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVI-----WCSLLKACKMHGNVE 524

Query: 375 LGQ 377
           LG+
Sbjct: 525 LGE 527


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/577 (39%), Positives = 352/577 (61%), Gaps = 12/577 (2%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L  C  LG +  G+ +H   +     +D+ + N++L +YA  G L    +VF  M   D 
Sbjct: 98  LKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDV 157

Query: 424 VSWNSVIGAFADS--EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           V+W S+I  ++     +  + A+  +L+M R G  PN     +++           G Q+
Sbjct: 158 VTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQI 217

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H    KY       + ++L+  Y +CGE+ +   +F  + E ++EVSWN++ISG+     
Sbjct: 218 HGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDEL-ESKNEVSWNALISGFARKGE 276

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +A+ L   M + G     FT++ +L + ++  +LE+G  +HA  +++  +    +G+ 
Sbjct: 277 GEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNT 336

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-P 660
           L+ MY+K G I  A + FD +   +V S NSM+ GYA+HG G +A+ LF +M L   + P
Sbjct: 337 LLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEP 396

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           + +TF+ VL+ACSHAGL+DEG  +F+ M + YGL P+L  ++ +VDL GRAG LD+ + F
Sbjct: 397 NDITFLSVLTACSHAGLLDEGLYYFELMKK-YGLEPKLSHYTTVVDLFGRAGLLDQAKSF 455

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           I +MPI PN+ IW  +LGA      + TE+G  AA  + E++P     + LL+N+YAS G
Sbjct: 456 IEEMPIEPNATIWGALLGA--SKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAG 513

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
           +W+DVAK RK MK++ +KKE  CSWV +++ VH+F A D SHP+K+ +YE  + LNQK++
Sbjct: 514 QWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIK 573

Query: 841 DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKLP---IRIMKNLRVCGDC 897
           + GYVP T      ++ + KE  + YHSEK+A+AF L  N+K P   IRIMKN+RVCGDC
Sbjct: 574 EIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALL-NTK-PGSVIRIMKNIRVCGDC 631

Query: 898 HSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           HSA K++S +V REI++RD+NRFHHF DG CSC DYW
Sbjct: 632 HSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 211/401 (52%), Gaps = 12/401 (2%)

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
           G+    R I+ +++++   +M G +   ++GK VH +L+ S   + + + N ++ MYAKC
Sbjct: 85  GSLEPDRTIYNKLLKR--CTMLGKL---KQGKLVHTHLMNSKFRNDLVIKNSILFMYAKC 139

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG---CYEEAIMNFCAMRRDGLMSSNFSLI 361
           G+++ +R VF  M  KD V+W +MI+G  Q+G       A++ F  M RDGL  + F+L 
Sbjct: 140 GSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALS 199

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S +  C  LG  + G+QIHG   K G   +V V ++L+ +YA  G L     VF  +   
Sbjct: 200 SLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESK 259

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           ++VSWN++I  FA  +    EA+  ++ M+R G+     T+  +L ++S+    + G  +
Sbjct: 260 NEVSWNALISGFA-RKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWL 318

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           HA ++K        + N LL  Y K G + D +K+F R+  + D VS NSM+ GY  + L
Sbjct: 319 HAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLV-KVDVVSCNSMLIGYAQHGL 377

Query: 542 LPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
             +A+ L   MM   +   +  TF +VL+AC+    L+ G+       +  LE  +   +
Sbjct: 378 GKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYT 437

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARH 640
            +VD++ + G +D A  F + MP+  N   W +++     H
Sbjct: 438 TVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMH 478



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 209/437 (47%), Gaps = 76/437 (17%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  KL H  ++   F  D+ + N+++ +Y + G L  A ++FDEM  ++ V+W  +++GY
Sbjct: 108 KQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGY 167

Query: 62  THKGMSNEACK---MFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
           +  G ++ A     +F EMVR G   N +AL S+++ C   G      G Q+H    K  
Sbjct: 168 SQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSC--VDGKQIHGCCWKYG 225

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              +  V + L+ MY  C E  + +R +F+E+E+++ +SWN++IS ++++G+      LF
Sbjct: 226 FQENVFVGSSLVDMYARCGELRE-SRLVFDELESKNEVSWNALISGFARKGEGEEALGLF 284

Query: 179 SRMQREGFRYSLKPNEYTFGSLI--TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
            +MQREGF       E+T+ +L+  ++   S+  G +L   ++   KK  L+   YVG+ 
Sbjct: 285 VKMQREGF----GATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKK--LVG--YVGNT 336

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
           L+  +A+ GN   A+K+F+++++ +VVS N ++ G                         
Sbjct: 337 LLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIG------------------------- 371

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
               YA+ G            +GK++V              +EE ++         +  +
Sbjct: 372 ----YAQHG------------LGKEAVE------------LFEEMMLWV------EIEPN 397

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
           + + +S L++C+  G +  G        K GL+  +S    ++ L+  AG L +      
Sbjct: 398 DITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIE 457

Query: 417 LMP-EHDQVSWNSVIGA 432
            MP E +   W +++GA
Sbjct: 458 EMPIEPNATIWGALLGA 474



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 186/394 (47%), Gaps = 43/394 (10%)

Query: 446 YYLDMRRAG-WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
           + LD+   G   P+   +  +L   +     K G  VH  ++     N+  I+N++L  Y
Sbjct: 77  HVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMY 136

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN-LVWF--MMQRGQRLDH 561
            KCG ++   ++F  M   +D V+W SMI+GY  +     A   LV F  M++ G R + 
Sbjct: 137 AKCGSLEIARQVFDEMC-VKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNE 195

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
           F  ++++  C  + +   G ++H C  +   + +V +GS+LVDMY++CG +  +   FD 
Sbjct: 196 FALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDE 255

Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           +  +N  SWN++ISG+AR G G++AL LF +M+ +G      T+  +L + S  G +++G
Sbjct: 256 LESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQG 315

Query: 682 ---------------------FKHFKSMS-------QVYGLIPQLEQFSCMVDLLGRAGE 713
                                  H  + S       +V+  + +++  SC   L+G A  
Sbjct: 316 KWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQH 375

Query: 714 ------LDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAV 767
                 ++  EE +  + I PN + + +VL AC  A      L        + +EP+ + 
Sbjct: 376 GLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLS- 434

Query: 768 NYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA 801
           +Y  + +++   G  +   +A+  ++E  ++  A
Sbjct: 435 HYTTVVDLFGRAGLLD---QAKSFIEEMPIEPNA 465



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 166/352 (47%), Gaps = 50/352 (14%)

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------------- 274
           +DL + ++++  +A+ G+   AR++F++M  K+VV+   ++ G  +              
Sbjct: 124 NDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLF 183

Query: 275 ------------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
                                         GK++HG   + G  + V VG+ LV+MYA+C
Sbjct: 184 LEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARC 243

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G + +SR VF  +  K+ VSWN +ISG  + G  EEA+  F  M+R+G  ++ F+  + L
Sbjct: 244 GELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALL 303

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            S ++ G +  G+ +H   +K G      V N LL +YA +G +    KVF  + + D V
Sbjct: 304 CSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVV 363

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGW---SPNGVTFINILAAASSFSMGKLGHQV 481
           S NS++  +A    L  EAV+ + +M    W    PN +TF+++L A S   +   G   
Sbjct: 364 SCNSMLIGYAQ-HGLGKEAVELFEEMML--WVEIEPNDITFLSVLTACSHAGLLDEGLYY 420

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
              + KY +  + +    ++  +G+ G +D  +     M    +   W +++
Sbjct: 421 FELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALL 472



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 156/328 (47%), Gaps = 20/328 (6%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D K  H    K+GF  +VF+ ++L+++Y R G+L  +  +FDE+  +N VSW  ++SG+ 
Sbjct: 213 DGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFA 272

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            KG   EA  +F +M R GF    +   ++L  C        + G  +H  ++KS +   
Sbjct: 273 RKGEGEEALGLFVKMQREGFGATEFTYSALL--CSSSTTGSLEQGKWLHAHMMKSGKKLV 330

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
           G V N L+ MY       D A+++F+ +   D++S NS++  Y+Q G      +LF  M 
Sbjct: 331 GYVGNTLLHMYAKSGNICD-AKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMM 389

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
                  ++PN+ TF S++TA   + L   G Y  +    ++KK GL   L   + +V  
Sbjct: 390 ---LWVEIEPNDITFLSVLTACSHAGLLDEGLYYFE----LMKKYGLEPKLSHYTTVVDL 442

Query: 241 FARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRR--KGKEVHGYLIRSGL-FDMVAVG-- 294
           F R G    A+   E+M I+ N      L+   +  K  E+  Y  +  L  D    G  
Sbjct: 443 FGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAH 502

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
             L N+YA  G   D   V + M  KDS
Sbjct: 503 TLLSNIYASAGQWKDVAKVRKEM--KDS 528


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/628 (38%), Positives = 359/628 (57%), Gaps = 11/628 (1%)

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM-RRDGLMSSNFSLISTLSSCASL 370
           SVF      D ++WN+M+     +     A+ ++  M  R   +   F+  S L  CA L
Sbjct: 33  SVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALL 92

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
               +G+ +HG+ +K  L SD+ +   LL++YA  G L     +F  M   ++V W S+I
Sbjct: 93  LEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMI 152

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
             +  +    +EA+  Y  M   G+SP+ VT   +++A +      +G ++H+ + + ++
Sbjct: 153 SGYMKNHC-PNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDM 211

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
                + +AL++ Y KCG++    ++F ++S++ D  +W+++I GY+ N    +A+ L  
Sbjct: 212 KICAVLGSALVNMYAKCGDLKTARQVFDQLSDK-DVYAWSALIFGYVKNNRSTEALQL-- 268

Query: 551 FMMQRG---QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
           F    G    R +  T   V+SACA +  LE G  VH    R      V + ++L+DM+S
Sbjct: 269 FREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFS 328

Query: 608 KCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVG 667
           KCG ID A R FD M  +++ SWNSM++G A HG G +AL  F  M+     PD +TF+G
Sbjct: 329 KCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIG 388

Query: 668 VLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPIT 727
           VL+ACSHAGLV EG K F  +  +YG+  + E + CMVDLL RAG L +  EFI  MP+ 
Sbjct: 389 VLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQ 448

Query: 728 PNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
           P+  IW ++LGAC   N    ELG +AA  L E+EP N   Y+LL+N+YA    W +V K
Sbjct: 449 PDGAIWGSMLGACRVYN--NLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKK 506

Query: 788 ARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQ 847
            R+ M E  ++K  GCS V + +  H F+AGD SHPE   I   L+++ +K++  GYV  
Sbjct: 507 VRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVAD 566

Query: 848 TKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNS-KLPIRIMKNLRVCGDCHSAFKFISK 906
           T   L +++   KE+ VS HSEK+A+ + L ++     I I+KNLRVC DCH+  K +SK
Sbjct: 567 TSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSK 626

Query: 907 IVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           I  R+I LRD NRFHHF DG CSC DYW
Sbjct: 627 IYQRQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 191/369 (51%), Gaps = 17/369 (4%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK +HG +++  L   + +   L+NMYA CG +  +R +F  M  ++ V W +MISG  +
Sbjct: 98  GKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMK 157

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N C  EA++ +  M  DG      ++ + +S+CA L  + +G ++H    ++ +     +
Sbjct: 158 NHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVL 217

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            +AL+++YA  G L    +VF  + + D  +W+++I  +  +    +EA++ + ++  AG
Sbjct: 218 GSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNR-STEALQLFREV--AG 274

Query: 455 WS---PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
            S   PN VT + +++A +     + G  VH  + +    +  ++ N+L+  + KCG++D
Sbjct: 275 GSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDID 334

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
             ++IF  MS  +D +SWNSM++G   + L  +A+     M     + D  TF  VL+AC
Sbjct: 335 AAKRIFDSMS-YKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTAC 393

Query: 572 ASVATLERG----MEVHAC-GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR- 625
           +    ++ G     E+ A  GVR   E        +VD+  + G +  A  F  +MP++ 
Sbjct: 394 SHAGLVQEGKKLFYEIEALYGVRLKSEH----YGCMVDLLCRAGLLAEAREFIRVMPLQP 449

Query: 626 NVYSWNSMI 634
           +   W SM+
Sbjct: 450 DGAIWGSML 458



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/465 (24%), Positives = 213/465 (45%), Gaps = 56/465 (12%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLAS--ASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACK 72
           GF +     N LI   + +G L    A  +F      + ++W  ++  + +  M   A +
Sbjct: 5   GFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQ 64

Query: 73  MFKEMV-RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
            + EM+ R+  + +R+   S+L+ C       FK G  +H  V+K     D  +   L+ 
Sbjct: 65  SYTEMLERSRNVPDRFTFPSLLKGCALLLE--FKVGKVLHGQVVKYMLHSDLYIETTLLN 122

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY +C +    AR +FE +  R+ + W S+IS Y +         L+ +M+ +GF     
Sbjct: 123 MYAACGD-LKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGF----S 177

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           P+E T  +L++A   + L    +  ++ + +++  +     +GSALV+ +A+ G+   AR
Sbjct: 178 PDEVTMATLVSAC--AELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTAR 235

Query: 252 KIFEQMIQKNVVSMNGLMEGRRK------------------------------------- 274
           ++F+Q+  K+V + + L+ G  K                                     
Sbjct: 236 QVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQL 295

Query: 275 -----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
                G+ VH Y+ R+     V++ N L++M++KCG ID ++ +F  M  KD +SWN+M+
Sbjct: 296 GDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMV 355

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GL 388
           +GL  +G   EA+  F  M+   L     + I  L++C+  G +  G+++  E   L G+
Sbjct: 356 NGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGV 415

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                    ++ L   AG L+   +   +MP + D   W S++GA
Sbjct: 416 RLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGA 460



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 143/271 (52%), Gaps = 10/271 (3%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K+ H Q++K+    D+++  TL+N+Y   GDL SA  LF+ M  RN V W  ++SGY
Sbjct: 96  KVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGY 155

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                 NEA  ++K+M   GF  +   + +++ AC E    G   GM++H  + + +   
Sbjct: 156 MKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLG--VGMKLHSHIREMDMKI 213

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
             ++ + L+ MY  C +    AR++F+++  +D+ +W+++I  Y +   +    +LF  +
Sbjct: 214 CAVLGSALVNMYAKCGD-LKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREV 272

Query: 182 QREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
                  +++PNE T  ++I+A A    L     +   +   +K   +S   + ++L+  
Sbjct: 273 AGGS---NMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVS---LNNSLIDM 326

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           F++ G+   A++IF+ M  K+++S N ++ G
Sbjct: 327 FSKCGDIDAAKRIFDSMSYKDLISWNSMVNG 357



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 100/435 (22%), Positives = 189/435 (43%), Gaps = 51/435 (11%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A  +F      D+++WNS++  +          + ++ M     R    P+ +TF SL+ 
Sbjct: 31  AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLE---RSRNVPDRFTFPSLLK 87

Query: 203 AAYSSVLSGSYLLQQIL-AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
                 L   + + ++L   V K  L SDLY+ + L++ +A  G+   AR +FE+M  +N
Sbjct: 88  GC---ALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRN 144

Query: 262 VVSMNGLMEGRRK-----------------------------------------GKEVHG 280
            V    ++ G  K                                         G ++H 
Sbjct: 145 KVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHS 204

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
           ++    +     +G+ LVNMYAKCG +  +R VF  +  KD  +W+ +I G  +N    E
Sbjct: 205 HIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTE 264

Query: 341 AIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           A+  F  +     M  N  ++++ +S+CA LG +  G+ +H    +      VS++N+L+
Sbjct: 265 ALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLI 324

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
            +++  G +    ++F  M   D +SWNS++   A    L  EA+  +  M+     P+ 
Sbjct: 325 DMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLA-LHGLGREALAQFHLMQTTDLQPDE 383

Query: 460 VTFINILAAASSFSMGKLGHQVHAQV-IKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
           +TFI +L A S   + + G ++  ++   Y V  ++     ++    + G + +  +   
Sbjct: 384 ITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIR 443

Query: 519 RMSERRDEVSWNSMI 533
            M  + D   W SM+
Sbjct: 444 VMPLQPDGAIWGSML 458



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 45/93 (48%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  I +    + V L N+LI+++ + GD+ +A ++FD M  ++ +SW  +V+G    G+ 
Sbjct: 305 HDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLG 364

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            EA   F  M       +      VL AC   G
Sbjct: 365 REALAQFHLMQTTDLQPDEITFIGVLTACSHAG 397


>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
          Length = 714

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 223/578 (38%), Positives = 342/578 (59%), Gaps = 9/578 (1%)

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           SL+  +SSC S+ +      IH   +K    SD  + + L+S+Y   GY     ++F  M
Sbjct: 144 SLVFAISSCTSVSYC---SAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 200

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR-RAGWSPNGVTFINILAAASSFSMGKL 477
           P  D VSWNS++   +     +   +  +  MR  +G  PN VT +++++A +       
Sbjct: 201 PNRDLVSWNSLMSGLS-GRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDE 259

Query: 478 GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI 537
           G  +H  V+K  ++ +  + N+L++ YGK G +D   ++F  M  R   VSWNSM+  + 
Sbjct: 260 GKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVR-SLVSWNSMVVIHN 318

Query: 538 HNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
           HN    K M+L   M + G   D  T   +L AC       +   +HA   R     D++
Sbjct: 319 HNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADII 378

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           I +AL+++Y+K GR++ +   F+ +  R+  +W +M++GYA H  G +A+ LF  M  +G
Sbjct: 379 IATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEG 438

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
              DHVTF  +LSACSH+GLV+EG K+F+ MS+VY + P+L+ +SCMVDLLGR+G L+  
Sbjct: 439 VEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDA 498

Query: 718 EEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYA 777
            E I  MP+ P+S +W  +LGAC        ELG++ A  L  ++P +  NY++L+N+Y+
Sbjct: 499 YELIKSMPMEPSSGVWGALLGACRVYG--NVELGKEVAEQLLSLDPSDHRNYIMLSNIYS 556

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
           + G W   +K R  MKE  + +  GCS++   + +H FV GD+ HP  D I+ KL+EL +
Sbjct: 557 AAGLWRXASKVRXLMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIR 616

Query: 838 KMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGD 896
           K+ +AG  P+T+F L D++ E K D+++ HSEK+A+AF +L   S +P+ I KNLR+CGD
Sbjct: 617 KIXEAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGD 676

Query: 897 CHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CHS  KF S +  R I++RDS RFHHF DG CSC DYW
Sbjct: 677 CHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 714



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 207/405 (51%), Gaps = 10/405 (2%)

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +H  +I+S  +    +G+ LV+MY K G  +D++ +F  M  +D VSWN+++SGL   G 
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGY 220

Query: 338 YEEAIMNFCAMRRD-GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
               +  FC MR + G   +  +L+S +S+CA +G +  G+ +HG  +KLG+     V N
Sbjct: 221 LGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVN 280

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           +L+++Y   G+L    ++F  MP    VSWNS++    +      + +  +  M+RAG +
Sbjct: 281 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMV-VIHNHNGYAEKGMDLFNLMKRAGIN 339

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P+  T + +L A +   +G+    +HA + +     +  I  ALL+ Y K G ++  E I
Sbjct: 340 PDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDI 399

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F  + + RD ++W +M++GY  +    +A+ L   M++ G  +DH TF  +LSAC+    
Sbjct: 400 FEEIKD-RDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGL 458

Query: 577 LERG---MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNS 632
           +E G    E+ +   R     D    S +VD+  + GR++ A      MP+      W +
Sbjct: 459 VEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGA 516

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGL 677
           ++     +G+ +    +  Q+    P  DH  ++ + +  S AGL
Sbjct: 517 LLGACRVYGNVELGKEVAEQLLSLDP-SDHRNYIMLSNIYSAAGL 560



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 210/430 (48%), Gaps = 33/430 (7%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H +++K     D F+ + L+++Y ++G    A +LFDEMP+R+ VSW  ++SG + +G 
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGY 220

Query: 67  ----SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                N  C+M  E   +G   N   L SV+ AC   G      G  +H +V+K   +  
Sbjct: 221 LGACLNAFCRMRTE---SGRQPNEVTLLSVVSACAXMG--ALDEGKSLHGVVVKLGMSGK 275

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V N LI MYG  L   D A ++FEE+  R L+SWNS++ +++  G       LF+ M+
Sbjct: 276 AKVVNSLINMYGK-LGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMK 334

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           R G    + P++ T  +L+ A   + L      + I A + + G  +D+ + +AL++ +A
Sbjct: 335 RAG----INPDQATMVALLRACTDTGLGRQA--ESIHAYIHRCGFNADIIIATALLNLYA 388

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGR------RKGKEVHGYLIRSGL-FDMVAVGN 295
           +LG    +  IFE++  ++ ++   ++ G       R+  ++   +++ G+  D V   +
Sbjct: 389 KLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTH 448

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNFCAMRR 350
            L++  +  G +++ +  F  M     V      ++ M+  L ++G  E+A   +  ++ 
Sbjct: 449 -LLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDA---YELIKS 504

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
             +  S+    + L +C   G + LG+++  + L L   SD      L ++Y+ AG    
Sbjct: 505 MPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLD-PSDHRNYIMLSNIYSAAGLWRX 563

Query: 411 CLKVFFLMPE 420
             KV  LM E
Sbjct: 564 ASKVRXLMKE 573



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 173/375 (46%), Gaps = 49/375 (13%)

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
           A SS  S SY    I A V K+   SD ++G  LVS + +LG    A+++F++M  +++V
Sbjct: 148 AISSCTSVSYC-SAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLV 206

Query: 264 SMNGLMEGRR------------------------------------------KGKEVHGY 281
           S N LM G                                            +GK +HG 
Sbjct: 207 SWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGV 266

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           +++ G+     V N L+NMY K G +D +  +F  M  +  VSWN+M+   + NG  E+ 
Sbjct: 267 VVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKG 326

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +  F  M+R G+     ++++ L +C   G     + IH    + G ++D+ ++ ALL+L
Sbjct: 327 MDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNL 386

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           YA  G L+    +F  + + D ++W +++  +A   A   EA+K +  M + G   + VT
Sbjct: 387 YAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYA-VHACGREAIKLFDLMVKEGVEVDHVT 445

Query: 462 FINILAAASSFSM---GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
           F ++L+A S   +   GK   ++ ++V  Y V       + ++   G+ G ++D  ++  
Sbjct: 446 FTHLLSACSHSGLVEEGKKYFEIMSEV--YRVEPRLDHYSCMVDLLGRSGRLEDAYELIK 503

Query: 519 RMSERRDEVSWNSMI 533
            M        W +++
Sbjct: 504 SMPMEPSSGVWGALL 518



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 172/369 (46%), Gaps = 55/369 (14%)

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
           +H  V+KS    DG + + L++MY       D A+R+F+E+  RDL+SWNS++S  S RG
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDED-AQRLFDEMPNRDLVSWNSLMSGLSGRG 219

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLL 228
              +    F RM+ E  R   +PNE T  S+++A A    L     L  +   V K G+ 
Sbjct: 220 YLGACLNAFCRMRTESGR---QPNEVTLLSVVSACAXMGALDEGKSLHGV---VVKLGMS 273

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM----------EGR------ 272
               V ++L++ + +LG    A ++FE+M  +++VS N ++          +G       
Sbjct: 274 GKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLM 333

Query: 273 -------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
                                    R+ + +H Y+ R G    + +   L+N+YAK G +
Sbjct: 334 KRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRL 393

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
           + S  +F  +  +D+++W  M++G   + C  EAI  F  M ++G+   + +    LS+C
Sbjct: 394 NASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSAC 453

Query: 368 ASLGWIMLGQ---QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQ 423
           +  G +  G+   +I  E  +  ++  +   + ++ L   +G L    ++   MP E   
Sbjct: 454 SHSGLVEEGKKYFEIMSEVYR--VEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSS 511

Query: 424 VSWNSVIGA 432
             W +++GA
Sbjct: 512 GVWGALLGA 520



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 132/259 (50%), Gaps = 16/259 (6%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H  ++K G +    + N+LIN+Y ++G L +AS+LF+EMP R+ VSW  +V  + 
Sbjct: 259 EGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHN 318

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQ---VHCLVLKSNQ 119
           H G + +   +F  M RAG   ++  + ++LRAC + G      G Q   +H  + +   
Sbjct: 319 HNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTG-----LGRQAESIHAYIHRCGF 373

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D +++  L+ +Y   L   + +  IFEEI+ RD I+W ++++ Y+         KLF 
Sbjct: 374 NADIIIATALLNLYAK-LGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFD 432

Query: 180 RMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
            M +EG    ++ +  TF  L++A ++S ++       +I++ V +     D Y  S +V
Sbjct: 433 LMVKEG----VEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SCMV 486

Query: 239 SGFARLGNFYYARKIFEQM 257
               R G    A ++ + M
Sbjct: 487 DLLGRSGRLEDAYELIKSM 505



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 55/99 (55%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           + A+  H  I + GF  D+ +   L+N+Y ++G L ++  +F+E+ DR++++W  +++GY
Sbjct: 359 RQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGY 418

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
                  EA K+F  MV+ G  ++      +L AC   G
Sbjct: 419 AVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSG 457


>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 265/827 (32%), Positives = 428/827 (51%), Gaps = 62/827 (7%)

Query: 74  FKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY 133
           + +M   G L N   L  VL+AC     +  + G  +H  +  ++   D  V   ++  Y
Sbjct: 41  YTQMESLGVLPNNTTLPLVLKAC--AAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFY 98

Query: 134 GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPN 193
             C    D AR +F+ +  RD++ WN+++  Y   G       L   M RE    +L+PN
Sbjct: 99  CKCGFVED-ARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRE----NLRPN 153

Query: 194 EYTFGSLITAA---------------------------YSSVLSGSYLL--QQILAMVKK 224
             T  +L+ A                             ++ L G YL    ++L ++  
Sbjct: 154 SRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFDMRVLPLLFD 213

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV--------VSMNGLME--GRRK 274
             ++ ++   +A++SG+  +G+++ A ++F QM+   V        V++    E    + 
Sbjct: 214 LMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKL 273

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK++H   I+    + + + N L+NMY+  G+++ S  +F  +  +D+  WN+MIS    
Sbjct: 274 GKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAA 333

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML-GQQIHGEGLKLGLDSDVS 393
            GC+EEA+  F  M+ +G+     +++  LS C  L   +L G+ +H   +K G+  D S
Sbjct: 334 FGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDAS 393

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           + NALLS+Y +   +    K+F  M   D +SWN++I A A +  L ++A + +  MR +
Sbjct: 394 LGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARN-TLRAQACELFERMRES 452

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
              PN  T I+ILAA    +    G  +H  V+K+++     +  AL   Y  CG+    
Sbjct: 453 EIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATA 512

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
             +F    +R D +SWN+MI+ Y+ N    KA+ L   M+   +  +  T   VLS+   
Sbjct: 513 RDLFEGCPDR-DLISWNAMIASYVKNNQAHKALLLFHRMISEAEP-NSVTIINVLSSFTH 570

Query: 574 VATLERGMEVHACGVRA--CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           +ATL +G  +HA   R    L  D+ + +A + MY++CG +  A   F  +P RN+ SWN
Sbjct: 571 LATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWN 630

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           +MI+GY  +G G  A+  FSQM  DG  P+ VTFV VLSACSH+G ++ G + F SM Q 
Sbjct: 631 AMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQD 690

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
           + + P+L  +SC+VDLL R G +D+  EFI+ MPI P++ +WR +L +C      +    
Sbjct: 691 FNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSC------RAYSD 744

Query: 752 RKAANMLFE----MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
            K A  +FE    +EP NA NYVLL+N+YA+ G W +V + R  +KE  ++K  G SW+ 
Sbjct: 745 AKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWII 804

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFD 854
           +K+ VH F AGD SHP+ D IY KL  L   MR+ GY P  ++   +
Sbjct: 805 VKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRETGYDPDLRWVFHE 851



 Score =  245 bits (626), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 185/702 (26%), Positives = 334/702 (47%), Gaps = 60/702 (8%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  I       DV +   +++ Y + G +  A  +FD M DR+ V W  +V GY   
Sbjct: 73  KSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGW 132

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   EA  + +EM R     N   + ++L AC+  G S  + G  VH   L+ N  FD  
Sbjct: 133 GCYEEAMLLVREMGRENLRPNSRTMVALLLACE--GASELRLGRGVHGYCLR-NGMFDS- 188

Query: 125 VSNVLIAMYGSCLE-STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
             +V  A+ G  L         +F+ +  R+++SWN++IS Y   GD     +LF +M  
Sbjct: 189 NPHVATALIGFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLV 248

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           +  ++           L+     + L    L +QI  +  K   + DLY+ +AL++ ++ 
Sbjct: 249 DEVKFD------CVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSN 302

Query: 244 LGNFYYARKIFE-----------QMI---------------------------QKNVVSM 265
            G+   + ++FE            MI                           ++ VV M
Sbjct: 303 NGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIM 362

Query: 266 NGLME----GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
             + E    G  KGK +H ++I+SG+    ++GN L++MY +   ++  + +F  M G D
Sbjct: 363 LSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVD 422

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            +SWNTMI  L +N    +A   F  MR   +  +++++IS L++C  +  +  G+ IHG
Sbjct: 423 IISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHG 482

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             +K  ++ +  +  AL  +Y + G  +    +F   P+ D +SWN++I ++  +     
Sbjct: 483 YVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHK 542

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTIENA 499
             + ++  +  A   PN VT IN+L++ +  +    G  +HA V +  +++  + ++ NA
Sbjct: 543 ALLLFHRMISEA--EPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANA 600

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
            ++ Y +CG +   E IF  +  +R+ +SWN+MI+GY  N     AM     M++ G R 
Sbjct: 601 FITMYARCGSLQSAENIFKTLP-KRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRP 659

Query: 560 DHFTFATVLSACASVATLERGMEV-HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
           +  TF +VLSAC+    +E G+++ H+      +  ++V  S +VD+ ++ G ID A  F
Sbjct: 660 NGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREF 719

Query: 619 FDLMPVR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
            D MP+  +   W +++S    +    +A T+F ++    P+
Sbjct: 720 IDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPM 761



 Score =  233 bits (594), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 200/783 (25%), Positives = 351/783 (44%), Gaps = 113/783 (14%)

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA--AYS 206
           +I+ +D   WNS+I   +   +  ++   +++M+  G    + PN  T   ++ A  A +
Sbjct: 12  KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLG----VLPNNTTLPLVLKACAAQN 67

Query: 207 SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN 266
           +V  G    + I   ++   L+ D+ VG+A+V  + + G    AR +F+ M  ++VV  N
Sbjct: 68  AVERG----KSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWN 123

Query: 267 GLMEGR-----------------------------------------RKGKEVHGYLIRS 285
            ++ G                                          R G+ VHGY +R+
Sbjct: 124 AMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRN 183

Query: 286 GLFDMVA-VGNGLVNMYAKCGTIDDSRS---VFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           G+FD    V   L+  Y +     D R    +F  M+ ++ VSWN MISG    G Y +A
Sbjct: 184 GMFDSNPHVATALIGFYLRF----DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKA 239

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +  F  M  D +     +++  + +CA LG + LG+QIH   +K     D+ + NALL++
Sbjct: 240 LELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNM 299

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y++ G L    ++F  +P  D   WNS+I A+A +     EA+  ++ M+  G   +  T
Sbjct: 300 YSNNGSLESSHQLFESVPNRDAPLWNSMISAYA-AFGCHEEAMDLFIRMQSEGVKKDERT 358

Query: 462 FINILAAASSFSMGKL-GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
            + +L+     + G L G  +HA VIK  +  + ++ NALLS Y +   ++  +KIF RM
Sbjct: 359 VVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRM 418

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
            +  D +SWN+MI     N L  +A  L   M +   + + +T  ++L+AC  V  L+ G
Sbjct: 419 -KGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFG 477

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
             +H   ++  +E +  + +AL DMY  CG    A   F+  P R++ SWN+MI+ Y ++
Sbjct: 478 RSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKN 537

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYGLIPQLE 699
               KAL LF +M  +   P+ VT + VLS+ +H   + +G   H     + + L   L 
Sbjct: 538 NQAHKALLLFHRMISEAE-PNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLS 596

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMP---------------------------------- 725
             +  + +  R G L   E     +P                                  
Sbjct: 597 LANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDG 656

Query: 726 ITPNSLIWRTVLGACCRANCRKTELGRKAANML---FEMEPQNAVNYVLLANMYASGGKW 782
             PN + + +VL AC  +     E+G +  + +   F + P+  V+Y  + ++ A GG  
Sbjct: 657 FRPNGVTFVSVLSACSHSGF--IEMGLQLFHSMVQDFNVTPE-LVHYSCIVDLLARGGC- 712

Query: 783 EDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDA 842
             + +AR+ +    ++ +A   W  +      +    ++      I+EKL +L + M   
Sbjct: 713 --IDEAREFIDSMPIEPDASV-WRALLSSCRAYSDAKQAKT----IFEKLDKL-EPMNAG 764

Query: 843 GYV 845
            YV
Sbjct: 765 NYV 767



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 129/514 (25%), Positives = 238/514 (46%), Gaps = 55/514 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H   +K  F  D+++ N L+N+Y   G L S+ +LF+ +P+R++  W  ++S Y
Sbjct: 272 KLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAY 331

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   EA  +F  M   G   +   +  +L  C+E   SG   G  +H  V+KS    
Sbjct: 332 AAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELA-SGLLKGKSLHAHVIKSGMRI 390

Query: 122 DGLVSNVLIAMYG--SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           D  + N L++MY   +C+ES    ++IF+ ++  D+ISWN++I   ++        +LF 
Sbjct: 391 DASLGNALLSMYTELNCVESV---QKIFDRMKGVDIISWNTMILALARNTLRAQACELFE 447

Query: 180 RMQREGFRYSLKPNEYTFGSLITAA-------YSSVLSGSYLLQQILAMVKKAGLLSDLY 232
           RM+       +KPN YT  S++ A        +   + G  +   I         L+D+Y
Sbjct: 448 RMRES----EIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMY 503

Query: 233 VG----------------------SALVSGFARLGNFYYARKIFEQMIQK---------N 261
           +                       +A+++ + +    + A  +F +MI +         N
Sbjct: 504 MNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISEAEPNSVTIIN 563

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSGL---FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
           V+S    +    +G+ +H Y+ R G     D+ ++ N  + MYA+CG++  + ++F+ + 
Sbjct: 564 VLSSFTHLATLPQGQSLHAYVTRRGFSLGLDL-SLANAFITMYARCGSLQSAENIFKTLP 622

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            ++ +SWN MI+G   NG   +A++ F  M  DG   +  + +S LS+C+  G+I +G Q
Sbjct: 623 KRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQ 682

Query: 379 I-HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAF-AD 435
           + H       +  ++   + ++ L A  G +    +    MP E D   W +++ +  A 
Sbjct: 683 LFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAY 742

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
           S+A  ++ +   LD      + N V   N+ A A
Sbjct: 743 SDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATA 776



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 17/205 (8%)

Query: 7   FHLQILKHGFAY--DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
            H  + + GF+   D+ L N  I +Y R G L SA  +F  +P RN +SW  +++GY   
Sbjct: 580 LHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMN 639

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGF-KFGMQV-HCLVLKSNQTFD 122
           G  ++A   F +M+  GF  N     SVL AC     SGF + G+Q+ H +V   N T +
Sbjct: 640 GRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSH---SGFIEMGLQLFHSMVQDFNVTPE 696

Query: 123 GLVSNVLIAMY--GSCLESTDCARRIFEEIETR-DLISWNSIIS---VYSQRGDTISVFK 176
            +  + ++ +   G C+   D AR   + +    D   W +++S    YS      ++F+
Sbjct: 697 LVHYSCIVDLLARGGCI---DEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFE 753

Query: 177 LFSRMQR-EGFRYSLKPNEYTFGSL 200
              +++      Y L  N Y    L
Sbjct: 754 KLDKLEPMNAGNYVLLSNVYATAGL 778


>gi|297841909|ref|XP_002888836.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297334677|gb|EFH65095.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 744

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/663 (36%), Positives = 376/663 (56%), Gaps = 33/663 (4%)

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           V + N L+ MYAKCG I  +R VF  M  ++ VSW  +I+G  Q G  ++    F +M  
Sbjct: 96  VILANYLITMYAKCGNILYARQVFDTMPERNVVSWTALITGYAQAGNEQDGFCLFSSMLA 155

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA---DAGY 407
                + F+L S L+ C        G+Q+HG  LKLGL   + V+NAL+S+Y    D   
Sbjct: 156 H-CCPNEFALSSVLTLCR----YEPGKQVHGLALKLGLYCSIYVANALISMYGRCHDGTA 210

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
                 VF  M   + V+WNS+I AF     L  +A+  ++ M   G   +  T +NI  
Sbjct: 211 AYEAWTVFEAMEFKNLVTWNSMIAAFQCCN-LGKQAIGVFMRMHSDGVGFDRATVLNICT 269

Query: 468 AASSFS------MGKLGHQVHAQVIKYNVANETTIENALLSCYGKC-GEMDDCEKIFARM 520
                S      + K   Q+H+  +K  +  +T +  AL+  Y +  GE  DC K+F  M
Sbjct: 270 TLYKSSDLDPDQVSKCCLQLHSLTVKSGLVTQTEVATALVKVYSEILGEFTDCYKLFMEM 329

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL--DHFTFATVLSACASVATLE 578
           S  RD V+W  +I+ +    +      ++ F   R ++L  D +TF++VL ACA + T  
Sbjct: 330 SHCRDIVAWTGIITAF---AVYDPERAILLFGQLRHEKLSPDWYTFSSVLKACAGLVTAR 386

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
             + +HA  ++     D V+ ++L+  Y+KCG +D   R FD M  R+V SWNS++  Y+
Sbjct: 387 HALSIHAQVIKGGFATDTVVNNSLIHAYAKCGSLDLCKRVFDDMDSRDVVSWNSLLKAYS 446

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
            HG  D  L +F +M +    PD  TF+ +LSACSHAG V EG + F+SM +    +PQL
Sbjct: 447 LHGQVDSILPVFQKMDIK---PDSATFIALLSACSHAGRVKEGLRIFRSMFEKPETLPQL 503

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
             ++C++D+LGRA    + EE I +MP+ P++++W T+LG+C +     T+LG+ AA+ L
Sbjct: 504 NHYACVIDMLGRAERFAEAEEVIKQMPMGPDAVVWSTLLGSCRKHG--NTQLGKLAADKL 561

Query: 759 FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
            E+EP N+++Y+ ++N+Y +   + +  K+ K M+   V+KE G S   + + VH F +G
Sbjct: 562 KEIEPTNSLSYIQMSNIYNAESSFNEGNKSIKEMETWRVRKEPGLSCTEIGNKVHEFTSG 621

Query: 819 DESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEP-ESKEDLVSYHSEKIAVAFVL 877
               P+++ I  +L+ L  ++++ GYVP+ + AL  +E  E KE+ +S+HSEK+A+AF +
Sbjct: 622 GRCRPDREAICRELERLISRLKEMGYVPEMRSALQQIEEDEQKEEHLSHHSEKLALAFAV 681

Query: 878 TRNSKLP------IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
               K        I+IMKN+R+C DCH+  K  SK++G+EI+LRDSNRFHHF D  CSC 
Sbjct: 682 MEGRKSGDCGVNLIQIMKNIRICIDCHNFMKLASKLLGKEILLRDSNRFHHFKDSSCSCN 741

Query: 932 DYW 934
           DYW
Sbjct: 742 DYW 744



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/514 (25%), Positives = 242/514 (47%), Gaps = 68/514 (13%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK--------------- 274
           ++ + + L++ +A+ GN  YAR++F+ M ++NVVS   L+ G  +               
Sbjct: 95  NVILANYLITMYAKCGNILYARQVFDTMPERNVVSWTALITGYAQAGNEQDGFCLFSSML 154

Query: 275 ---------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKC--GTID-DS 310
                                GK+VHG  ++ GL+  + V N L++MY +C  GT   ++
Sbjct: 155 AHCCPNEFALSSVLTLCRYEPGKQVHGLALKLGLYCSIYVANALISMYGRCHDGTAAYEA 214

Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL---MSSNFSLISTLSSC 367
            +VF  M  K+ V+WN+MI+        ++AI  F  M  DG+    ++  ++ +TL   
Sbjct: 215 WTVFEAMEFKNLVTWNSMIAAFQCCNLGKQAIGVFMRMHSDGVGFDRATVLNICTTLYKS 274

Query: 368 ASLGWIMLGQ---QIHGEGLKLGLDSDVSVSNALLSLYADA-GYLSRCLKVFFLMPE-HD 422
           + L    + +   Q+H   +K GL +   V+ AL+ +Y++  G  + C K+F  M    D
Sbjct: 275 SDLDPDQVSKCCLQLHSLTVKSGLVTQTEVATALVKVYSEILGEFTDCYKLFMEMSHCRD 334

Query: 423 QVSWNSVIGAFA--DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            V+W  +I AFA  D E     A+  +  +R    SP+  TF ++L A +     +    
Sbjct: 335 IVAWTGIITAFAVYDPE----RAILLFGQLRHEKLSPDWYTFSSVLKACAGLVTARHALS 390

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +HAQVIK   A +T + N+L+  Y KCG +D C+++F  M + RD VSWNS++  Y    
Sbjct: 391 IHAQVIKGGFATDTVVNNSLIHAYAKCGSLDLCKRVFDDM-DSRDVVSWNSLLKAY---S 446

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG- 599
           L  +  +++    +   + D  TF  +LSAC+    ++ G+ +     R+  E    +  
Sbjct: 447 LHGQVDSILPVFQKMDIKPDSATFIALLSACSHAGRVKEGLRI----FRSMFEKPETLPQ 502

Query: 600 ----SALVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSMISGYARHGHGDKALTLFSQMK 654
               + ++DM  +  R   A      MP+  +   W++++    +HG+         ++K
Sbjct: 503 LNHYACVIDMLGRAERFAEAEEVIKQMPMGPDAVVWSTLLGSCRKHGNTQLGKLAADKLK 562

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
              P  + ++++ + +  +     +EG K  K M
Sbjct: 563 EIEP-TNSLSYIQMSNIYNAESSFNEGNKSIKEM 595



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 237/529 (44%), Gaps = 71/529 (13%)

Query: 2   KDAKLFHLQILKHGFAY--DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           +D    H  +L H + Y  +V L N LI +Y + G++  A ++FD MP+RN VSW  +++
Sbjct: 76  RDGINLHHHMLSHPYCYSQNVILANYLITMYAKCGNILYARQVFDTMPERNVVSWTALIT 135

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           GY   G   +   +F  M+ A    N +AL SVL  C+      ++ G QVH L LK   
Sbjct: 136 GYAQAGNEQDGFCLFSSML-AHCCPNEFALSSVLTLCR------YEPGKQVHGLALKLGL 188

Query: 120 TFDGLVSNVLIAMYGSCLESTDC--ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
                V+N LI+MYG C + T    A  +FE +E ++L++WNS+I+ +           +
Sbjct: 189 YCSIYVANALISMYGRCHDGTAAYEAWTVFEAMEFKNLVTWNSMIAAFQCCNLGKQAIGV 248

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAY-SSVLSGSYLLQ---QILAMVKKAGLLSDLYV 233
           F RM  +G  +    +  T  ++ T  Y SS L    + +   Q+ ++  K+GL++   V
Sbjct: 249 FMRMHSDGVGF----DRATVLNICTTLYKSSDLDPDQVSKCCLQLHSLTVKSGLVTQTEV 304

Query: 234 GSALVSGFAR-LGNFYYARKIFEQMIQ-KNVVSMNGLMEG-------------------- 271
            +ALV  ++  LG F    K+F +M   +++V+  G++                      
Sbjct: 305 ATALVKVYSEILGEFTDCYKLFMEMSHCRDIVAWTGIITAFAVYDPERAILLFGQLRHEK 364

Query: 272 --------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
                                R    +H  +I+ G      V N L++ YAKCG++D  +
Sbjct: 365 LSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFATDTVVNNSLIHAYAKCGSLDLCK 424

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
            VF  M  +D VSWN+++     +G  +  +  F  M    +   + + I+ LS+C+  G
Sbjct: 425 RVFDDMDSRDVVSWNSLLKAYSLHGQVDSILPVFQKM---DIKPDSATFIALLSACSHAG 481

Query: 372 WIMLGQQIHGEGL-KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE-HDQVSWNSV 429
            +  G +I      K      ++    ++ +   A   +   +V   MP   D V W+++
Sbjct: 482 RVKEGLRIFRSMFEKPETLPQLNHYACVIDMLGRAERFAEAEEVIKQMPMGPDAVVWSTL 541

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI---NILAAASSFSMG 475
           +G+        ++  K   D  +     N +++I   NI  A SSF+ G
Sbjct: 542 LGSCRKHGN--TQLGKLAADKLKEIEPTNSLSYIQMSNIYNAESSFNEG 588



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 206/468 (44%), Gaps = 71/468 (15%)

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA------DSEALVSEAV 444
           +V ++N L+++YA  G +    +VF  MPE + VSW ++I  +A      D   L S  +
Sbjct: 95  NVILANYLITMYAKCGNILYARQVFDTMPERNVVSWTALITGYAQAGNEQDGFCLFSSML 154

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
                   A   PN     ++L    +    + G QVH   +K  +     + NAL+S Y
Sbjct: 155 --------AHCCPNEFALSSVL----TLCRYEPGKQVHGLALKLGLYCSIYVANALISMY 202

Query: 505 GKCGEMD---DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
           G+C +     +   +F  M E ++ V+WNSMI+ +    L  +A+ +   M   G   D 
Sbjct: 203 GRCHDGTAAYEAWTVFEAM-EFKNLVTWNSMIAAFQCCNLGKQAIGVFMRMHSDGVGFDR 261

Query: 562 FTFATVLSACASV---ATLERG------MEVHACGVRACLEFDVVIGSALVDMYSKC-GR 611
              ATVL+ C ++   + L+        +++H+  V++ L     + +ALV +YS+  G 
Sbjct: 262 ---ATVLNICTTLYKSSDLDPDQVSKCCLQLHSLTVKSGLVTQTEVATALVKVYSEILGE 318

Query: 612 I-DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
             D    F ++   R++ +W  +I+ +A +   ++A+ LF Q++ +   PD  TF  VL 
Sbjct: 319 FTDCYKLFMEMSHCRDIVAWTGIITAFAVYD-PERAILLFGQLRHEKLSPDWYTFSSVLK 377

Query: 671 ACS-----------HAGLVDEGFKH----FKSMSQVYGLIPQLE---------------Q 700
           AC+           HA ++  GF        S+   Y     L+                
Sbjct: 378 ACAGLVTARHALSIHAQVIKGGFATDTVVNNSLIHAYAKCGSLDLCKRVFDDMDSRDVVS 437

Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
           ++ ++      G++D I     KM I P+S  +  +L AC  A   + + G +    +FE
Sbjct: 438 WNSLLKAYSLHGQVDSILPVFQKMDIKPDSATFIALLSACSHAG--RVKEGLRIFRSMFE 495

Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
            +P+        A +    G+ E  A+A + +K+  +  +A   W T+
Sbjct: 496 -KPETLPQLNHYACVIDMLGRAERFAEAEEVIKQMPMGPDA-VVWSTL 541



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 21/205 (10%)

Query: 564 FATVLSACASVATLERGMEVHACGVRA--CLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
           +A +  ACA    L  G+ +H   +    C   +V++ + L+ MY+KCG I YA + FD 
Sbjct: 62  YAALFQACADQRNLRDGINLHHHMLSHPYCYSQNVILANYLITMYAKCGNILYARQVFDT 121

Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           MP RNV SW ++I+GYA+ G+      LFS M L    P+      VL+ C +     E 
Sbjct: 122 MPERNVVSWTALITGYAQAGNEQDGFCLFSSM-LAHCCPNEFALSSVLTLCRY-----EP 175

Query: 682 FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE---FINKMPITPNSLIWRTVLG 738
            K    ++   GL   +   + ++ + GR  +     E       M    N + W +++ 
Sbjct: 176 GKQVHGLALKLGLYCSIYVANALISMYGRCHDGTAAYEAWTVFEAMEFK-NLVTWNSMIA 234

Query: 739 A--CCRANCRKTELGRKAANMLFEM 761
           A  CC        LG++A  +   M
Sbjct: 235 AFQCC-------NLGKQAIGVFMRM 252



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 6/172 (3%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           ++ A   H Q++K GFA D  + N+LI+ Y + G L    ++FD+M  R+ VSW  ++  
Sbjct: 385 ARHALSIHAQVIKGGFATDTVVNNSLIHAYAKCGSLDLCKRVFDDMDSRDVVSWNSLLKA 444

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y+  G  +    +F++M       +     ++L AC   G    K G+++   + +  +T
Sbjct: 445 YSLHGQVDSILPVFQKM---DIKPDSATFIALLSACSHAG--RVKEGLRIFRSMFEKPET 499

Query: 121 FDGLVS-NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDT 171
              L     +I M G      +    I +     D + W++++    + G+T
Sbjct: 500 LPQLNHYACVIDMLGRAERFAEAEEVIKQMPMGPDAVVWSTLLGSCRKHGNT 551


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 256/743 (34%), Positives = 403/743 (54%), Gaps = 48/743 (6%)

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---------------- 274
           L +G+A++S   R G  ++A K+F +M +++V S N ++ G  K                
Sbjct: 129 LRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLW 188

Query: 275 -------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
                                    G+EVH +++R GL   V V N LV MYAKCG ++ 
Sbjct: 189 AGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEA 248

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +R VF  M   D +SWN MI+G  +N   E  +  F  M  D +  +  ++ S   +   
Sbjct: 249 ARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGL 308

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           L  +   ++IH   +K G  +DV+  N+L+ +Y+  G +     VF  M   D +SW ++
Sbjct: 309 LSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAM 368

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           I  + +      +A++ Y  M     SP+ VT  + LAA +S     +G ++H       
Sbjct: 369 ISGY-EKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKG 427

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV 549
                 + NAL+  Y K   ++   ++F  M ++ D +SW+SMI+G+  N    +A+   
Sbjct: 428 FIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDK-DVISWSSMIAGFCFNHKNFEALYYF 486

Query: 550 WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
             M+    + +  TF   L+ACA+  +L  G E+HA  +R  +  +  + +AL+D+Y KC
Sbjct: 487 RHMLA-DVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKC 545

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
           G+  YA   F     ++V SWN M++G+  HGHGD AL+ F++M   G  PD VTFV +L
Sbjct: 546 GQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALL 605

Query: 670 SACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPN 729
             CS AG+V +G++ F SM++ Y ++P L+ ++CMVDLL R G L +   FIN+MPITP+
Sbjct: 606 CGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPD 665

Query: 730 SLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKAR 789
           + +W  +L   CR + R  ELG  AA ++ E+EP +A  +VLL+++YA  G W +V+K R
Sbjct: 666 AAVWGALLNG-CRIH-RNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVR 723

Query: 790 KAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTK 849
           K M+   ++ + GCSWV +K  +H F+  DESHP+   I + L  + ++M+ +G+ P   
Sbjct: 724 KTMRVKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPVES 783

Query: 850 FALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIV 908
           ++L D E  SK+D++  HSE++AVAF L   +    I + KN   C  CH   + ISKIV
Sbjct: 784 YSLEDKE-VSKDDVLCGHSERLAVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIV 842

Query: 909 GREIVLRDSNRFHHFNDGKCSCG 931
            REI +RD+  FHHF DG CSCG
Sbjct: 843 RREITVRDTKEFHHFRDGSCSCG 865



 Score =  196 bits (498), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 151/571 (26%), Positives = 278/571 (48%), Gaps = 61/571 (10%)

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
           ++ TF   + N +++M     E+   A ++F ++  RD+ SWN ++  Y + G       
Sbjct: 123 AHGTFGLRLGNAMLSMLVRFGETWH-AWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALD 181

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
           L+ RM   G R    P+ YTF  ++ +     +    + +++ A V + GL  ++ V +A
Sbjct: 182 LYHRMLWAGAR----PDVYTFPCVLRSCGG--VPDLTMGREVHAHVLRFGLGVEVDVLNA 235

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---------------------- 274
           LV+ +A+ G+   ARK+F+ M   + +S N ++ G  +                      
Sbjct: 236 LVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPN 295

Query: 275 -------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                               KE+H   ++ G    VA  N L+ MY+  G + ++ +VF 
Sbjct: 296 LMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFS 355

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M  +D++SW  MISG ++NG  ++A+  +  M  + +   + ++ S L++CASLG + +
Sbjct: 356 RMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDV 415

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA- 434
           G ++H      G    + V+NAL+ +YA +  + + ++VF  MP+ D +SW+S+I  F  
Sbjct: 416 GIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCF 475

Query: 435 ---DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA 491
              + EAL      YY     A   PN VTFI  LAA ++    + G ++HA V++  +A
Sbjct: 476 NHKNFEAL------YYFRHMLADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIA 529

Query: 492 NETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWF 551
           +E  + NALL  Y KCG+       F      +D VSWN M++G++ +     A++    
Sbjct: 530 SEGYVPNALLDLYVKCGQTGYAWAQFGAHG-TKDVVSWNIMLAGFVAHGHGDIALSFFNE 588

Query: 552 MMQRGQRLDHFTFATVLSACASVATLERGMEV-HACGVRACLEFDVVIGSALVDMYSKCG 610
           M++ G+  D  TF  +L  C+    + +G E+ H+   +  +  ++   + +VD+ S+ G
Sbjct: 589 MLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVG 648

Query: 611 RIDYASRFFDLMPVR-NVYSWNSMISGYARH 640
           R+     F + MP+  +   W ++++G   H
Sbjct: 649 RLTEGYNFINRMPITPDAAVWGALLNGCRIH 679



 Score =  193 bits (490), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 149/564 (26%), Positives = 256/564 (45%), Gaps = 54/564 (9%)

Query: 14  HGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKM 73
           HG  + + L N ++++ VR G+   A K+F +MP+R+  SW  +V GY   G   EA  +
Sbjct: 124 HG-TFGLRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDL 182

Query: 74  FKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY 133
           +  M+ AG   + Y    VLR+C   G      G +VH  VL+     +  V N L+ MY
Sbjct: 183 YHRMLWAGARPDVYTFPCVLRSCG--GVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMY 240

Query: 134 GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPN 193
             C +  + AR++F+ +   D ISWN++I+ + +  +  +  +LF  M  +     ++PN
Sbjct: 241 AKCGD-VEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLED----EVEPN 295

Query: 194 EYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKI 253
             T  S+  A  S +LS     ++I A+  K G  +D+   ++L+  ++ LG    A  +
Sbjct: 296 LMTITSVTVA--SGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTV 353

Query: 254 FEQMIQKNVVSMNGLMEGRRK--------------------------------------- 274
           F +M  ++ +S   ++ G  K                                       
Sbjct: 354 FSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRL 413

Query: 275 --GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
             G ++H      G    + V N LV MYAK   I+ +  VF++M  KD +SW++MI+G 
Sbjct: 414 DVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGF 473

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
             N    EA+  F  M  D +  ++ + I+ L++CA+ G +  G++IH   L+ G+ S+ 
Sbjct: 474 CFNHKNFEALYYFRHMLAD-VKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEG 532

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V NALL LY   G        F      D VSWN ++  F  +      A+ ++ +M  
Sbjct: 533 YVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFV-AHGHGDIALSFFNEMLE 591

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQV-HAQVIKYNVANETTIENALLSCYGKCGEMD 511
            G  P+ VTF+ +L   S   M   G ++ H+   KY++         ++    + G + 
Sbjct: 592 TGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLT 651

Query: 512 DCEKIFARMSERRDEVSWNSMISG 535
           +      RM    D   W ++++G
Sbjct: 652 EGYNFINRMPITPDAAVWGALLNG 675



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 196/465 (42%), Gaps = 51/465 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +L+ G   +V + N L+ +Y + GD+ +A K+FD M   + +SW  +++G+      
Sbjct: 218 HAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHEC 277

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
               ++F  M+      N   + SV  A      S   F  ++H L +K     D    N
Sbjct: 278 EAGLELFLHMLEDEVEPNLMTITSVTVASGLL--SDLDFAKEIHALAVKRGFATDVAFCN 335

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI MY S L     A  +F  +ETRD +SW ++IS Y + G      ++++ M+     
Sbjct: 336 SLIQMYSS-LGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVN--- 391

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
            ++ P++ T  S + A  S       +    LA  K  G +  + V +ALV  +A+    
Sbjct: 392 -NVSPDDVTVASALAACASLGRLDVGIKLHELATSK--GFIRYIVVANALVEMYAKSKII 448

Query: 248 YYARKIFEQMIQKNVVSMNGLMEG------------------------------------ 271
             A ++F+ M  K+V+S + ++ G                                    
Sbjct: 449 EKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLADVKPNSVTFIAALAACA 508

Query: 272 ----RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
                R GKE+H +++R G+     V N L+++Y KCG    + + F     KD VSWN 
Sbjct: 509 ATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNI 568

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI-HGEGLKL 386
           M++G   +G  + A+  F  M   G      + ++ L  C+  G +  G ++ H    K 
Sbjct: 569 MLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKY 628

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI 430
            +  ++     ++ L +  G L+        MP   D   W +++
Sbjct: 629 SIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALL 673



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 201/456 (44%), Gaps = 50/456 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H   +K GFA DV  CN+LI +Y  +G +  A  +F  M  R+++SW  ++SGY  
Sbjct: 315 AKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEK 374

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G  ++A +++  M       +   + S L AC   G      G+++H L          
Sbjct: 375 NGFPDKALEVYALMEVNNVSPDDVTVASALAACASLG--RLDVGIKLHELATSKGFIRYI 432

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +V+N L+ MY    +  + A  +F+ +  +D+ISW+S+I+ +            F  M  
Sbjct: 433 VVANALVEMYAKS-KIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLA 491

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL-QQILAMVKKAGLLSDLYVGSALVSGFA 242
           +     +KPN  TF   I A  +   +GS    ++I A V + G+ S+ YV +AL+  + 
Sbjct: 492 D-----VKPNSVTF---IAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYV 543

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN------- 295
           + G   YA   F     K+VVS N ++ G       HG +  S   +M+  G        
Sbjct: 544 KCGQTGYAWAQFGAHGTKDVVSWNIMLAGFV--AHGHGDIALSFFNEMLETGEHPDEVTF 601

Query: 296 -GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
             L+   ++ G +     +F  M  K S+     +  L    C  +       + R G +
Sbjct: 602 VALLCGCSRAGMVSQGWELFHSMTEKYSI-----VPNLKHYACMVD------LLSRVGRL 650

Query: 355 SSNFSLISTL---SSCASLGWIMLGQQIH-----GE---GLKLGLDSDVSVSNALLS-LY 402
           +  ++ I+ +      A  G ++ G +IH     GE    + L L+ + +  + LLS LY
Sbjct: 651 TEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLY 710

Query: 403 ADAGYLSRCLKVFFLMP----EHDQ-VSWNSVIGAF 433
           ADAG  +   KV   M     EHD   SW  V GA 
Sbjct: 711 ADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKGAI 746



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 6/202 (2%)

Query: 538 HNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
           H EL       +W +    +  D   +  +   C      E G+        A   F + 
Sbjct: 75  HGEL----QQALWLLESSPEPPDEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLR 130

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           +G+A++ M  + G   +A + F  MP R+V+SWN M+ GY + G  ++AL L+ +M   G
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
             PD  TF  VL +C     +  G +   +    +GL  +++  + +V +  + G+++  
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMG-REVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAA 249

Query: 718 EEFINKMPITPNSLIWRTVLGA 739
            +  + M +T + + W  ++  
Sbjct: 250 RKVFDGMSLT-DCISWNAMIAG 270


>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 242/649 (37%), Positives = 371/649 (57%), Gaps = 56/649 (8%)

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ-NGCYEEAIMNFCA 347
           D+V++   + +    C  ++ +R+VF  M  + +V+WNTM+SG  +  G  +EA   F  
Sbjct: 72  DVVSLNKTIASFVRACD-LESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDK 130

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           +     +S N  L+  L S      +    ++  +        D++  N L+S +A  G 
Sbjct: 131 IPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVK--------DIASWNTLISGFAQNGQ 182

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           + +   +F +MPE + VSW+++I  + +   L +                          
Sbjct: 183 MQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEA-------------------------- 216

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTI-ENALLSCYGKCGEMDDCEKIFARMSERRDE 526
                          A+ +  NV  ++ + E A+L+ Y K G+++  E+IF RM+ + + 
Sbjct: 217 ---------------AEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVK-NL 260

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           V+WNSMI+GY+ N      + +   M++   R +  + ++VL  C++++ L  G ++H  
Sbjct: 261 VTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQL 320

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
             ++ L  D    ++L+ MY KCG +D A + F  MP ++V SWN+MISGYA+HG G KA
Sbjct: 321 VSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKA 380

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           L LF +M+     PD +TFV V+ AC+HAG VD G ++FKSM + +G+  +   ++C++D
Sbjct: 381 LHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVID 440

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           LLGRAG LD+    I +MP  P++ I+ T+LGA CR + +  +L   AA  L  ++P +A
Sbjct: 441 LLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGA-CRIH-KNLDLAEFAARNLLNLDPTSA 498

Query: 767 VNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKD 826
             YV LAN+YA+  KW+ VAK RK MKE  V K  G SW+ +K   H F + D  HPE  
Sbjct: 499 TGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELT 558

Query: 827 LIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPI 885
            I++KL EL+ KM+ AGYVP  +FAL D+E E KE L+ +HSEK+A+AF L + +   PI
Sbjct: 559 SIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPI 618

Query: 886 RIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           R+ KNLRVCGDCH A KFIS I  REI++RD+ RFHHF +G CSCGDYW
Sbjct: 619 RVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 125/544 (22%), Positives = 231/544 (42%), Gaps = 77/544 (14%)

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQ-RGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
           + AR +FE++  R  ++WN+++S Y++  G      +LF ++         +P+  ++  
Sbjct: 90  ESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIP--------EPDSVSYNI 141

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           ++     S     Y ++  LA   K  +  D+   + L+SGFA+ G    A  +F  M +
Sbjct: 142 MLVCYLRS-----YGVEAALAFFNKMPV-KDIASWNTLISGFAQNGQMQKAFDLFSVMPE 195

Query: 260 KNVVSMNGLMEGRRKGKEVHGY--LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
           KN VS + ++ G  +  ++     L ++     V V   ++  Y K G ++ +  +F+ M
Sbjct: 196 KNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRM 255

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             K+ V+WN+MI+G  +N   E+ +  F  M    +  +  SL S L  C++L  + LG+
Sbjct: 256 AVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGR 315

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           Q+H    K  L  D +   +L+S+Y   G L    K+F  MP  D +SWN++I  +A   
Sbjct: 316 QMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHG 375

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTI 496
           A   +A+  +  MR     P+ +TF+ ++ A +      LG Q    + K + +  +   
Sbjct: 376 A-GRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVH 434

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
              ++   G+ G +D+   +   M  +                   P A           
Sbjct: 435 YTCVIDLLGRAGRLDEAVSLIKEMPFK-------------------PHAA---------- 465

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA---LVDMYSKCGRID 613
                  + T+L AC     + + +++     R  L  D    +    L ++Y+   + D
Sbjct: 466 ------IYGTLLGAC----RIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWD 515

Query: 614 YASRFFDLMPVRNV-----YSWNSMISGYARHGHGDK---ALT--------LFSQMKLDG 657
             ++   +M   NV     YSW  + S        D+    LT        L  +MKL G
Sbjct: 516 QVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAG 575

Query: 658 PLPD 661
            +PD
Sbjct: 576 YVPD 579



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 109/464 (23%), Positives = 193/464 (41%), Gaps = 108/464 (23%)

Query: 17  AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH-KGMSNEACKMFK 75
           A DV   N  I  +VR  DL SA  +F++M  R +V+W  ++SGYT   G   EA ++F 
Sbjct: 70  ASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFD 129

Query: 76  EMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS 135
           ++                       P    + + + C  L+S               YG 
Sbjct: 130 KIPE---------------------PDSVSYNIMLVCY-LRS---------------YG- 151

Query: 136 CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
                + A   F ++  +D+ SWN++IS ++Q G     F LFS M  +           
Sbjct: 152 ----VEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKN---------- 197

Query: 196 TFGSLITAAYSSVLSGSYL----LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
                   ++S+++SG Y+    L+    + K  G+ S + V +A+++G+ + G    A 
Sbjct: 198 ------GVSWSAMISG-YVEHGDLEAAEELYKNVGMKS-VVVETAMLTGYMKFGKVELAE 249

Query: 252 KIFEQMIQKNVVSMNGLMEGRRK------------------------------------- 274
           +IF++M  KN+V+ N ++ G  +                                     
Sbjct: 250 RIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLS 309

Query: 275 ----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
               G+++H  + +S L         L++MY KCG +D +  +F  M  KD +SWN MIS
Sbjct: 310 ALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMIS 369

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLD 389
           G  Q+G   +A+  F  MR   +     + ++ + +C   G++ LG Q      K  G++
Sbjct: 370 GYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIE 429

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
           +       ++ L   AG L   + +   MP     + + +++GA
Sbjct: 430 AKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGA 473



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 84/382 (21%), Positives = 159/382 (41%), Gaps = 63/382 (16%)

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           L +   SDV   N  ++ +  A  L     VF  M     V+WN+++  +      V EA
Sbjct: 65  LHVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEA 124

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
            + +  +      P+ V++                                   N +L C
Sbjct: 125 HELFDKIPE----PDSVSY-----------------------------------NIMLVC 145

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           Y +   ++     F +M   +D  SWN++ISG+  N  + KA +L   M ++    +  +
Sbjct: 146 YLRSYGVEAALAFFNKMPV-KDIASWNTLISGFAQNGQMQKAFDLFSVMPEK----NGVS 200

Query: 564 FATVLSACASVATLERGMEVHA-CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           ++ ++S       LE   E++   G+++     VV+ +A++  Y K G+++ A R F  M
Sbjct: 201 WSAMISGYVEHGDLEAAEELYKNVGMKS-----VVVETAMLTGYMKFGKVELAERIFQRM 255

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
            V+N+ +WNSMI+GY  +   +  L +F  M      P+ ++   VL  CS+   +  G 
Sbjct: 256 AVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLG- 314

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLG---RAGELDKIEEFINKMPITPNSLIWRTVLGA 739
              + M Q+    P  +  +    L+    + G+LD   +   +MP   + + W  ++  
Sbjct: 315 ---RQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMP-RKDVISWNAMISG 370

Query: 740 CCRANCRKTELGRKAANMLFEM 761
             +        GRKA ++  +M
Sbjct: 371 YAQHGA-----GRKALHLFDKM 387



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  + K   + D   C +LI++Y + GDL SA KLF EMP ++ +SW  ++SGY   G  
Sbjct: 318 HQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAG 377

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            +A  +F +M       +     +V+ AC   G
Sbjct: 378 RKALHLFDKMRNGTMKPDWITFVAVILACNHAG 410


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/690 (35%), Positives = 385/690 (55%), Gaps = 41/690 (5%)

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD---SRSVFRFMIGKDSVSWNTMISGLDQ 334
           +H  +I++GL +     + L+         D    + SVF  +   + + WNTM  G   
Sbjct: 21  IHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHAL 80

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +     A+  +  M   GL+ ++++    L +CA       GQQIHG  LKLG D D+ V
Sbjct: 81  SSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYV 140

Query: 395 SNALLSL-------------------------------YADAGYLSRCLKVFFLMPEHDQ 423
             +L+++                               YA  GY+    K+F  +P  D 
Sbjct: 141 HTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDV 200

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSWN++I  +A++     EA++ + +M +    P+  T + +L+A +  +  +LG QVH+
Sbjct: 201 VSWNALISGYAET-GNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHS 259

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
            +  +   +   I NAL+  Y KCGE++    +F  +S  +D +SWN++I GY H  L  
Sbjct: 260 WIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLS-YKDVISWNTLIGGYTHMNLYK 318

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC--LEFDVVIGSA 601
           +A+ L   M++ G+  +  T  ++L ACA +  ++ G  +H    +    +     + ++
Sbjct: 319 EALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTS 378

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+DMY+KCG I+ A + FD M  R++ SWN+MI G+A HG  + A  +FS+M+ DG  PD
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPD 438

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            +TFVG+LSACSH+G++D G   F+SM++ Y + P+LE + CM+DLLG +G   + EE I
Sbjct: 439 DITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 498

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
           N M + P+ +IW ++L AC        ELG   A  L ++EP+N+ +YVLL+N+YA+ G+
Sbjct: 499 NSMEMDPDGVIWCSLLKACKMHG--NVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGR 556

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           W +VAK R  + +  +KK  GCS + +   VH F+ GD+ HP    IY  L+E+   + +
Sbjct: 557 WNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEE 616

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSA 900
           AG+VP T   L ++E E KE  + +HSEK+A+AF +++      + I+KNLRVC +CH A
Sbjct: 617 AGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEA 676

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
            K ISKI  REI+ RD  RFHHF DG CSC
Sbjct: 677 TKLISKIYKREIIARDRTRFHHFXDGVCSC 706



 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 248/542 (45%), Gaps = 74/542 (13%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A  +F+ I+  +L+ WN++   ++   D +S   L+  M   G    L PN YTF  L+ 
Sbjct: 56  AISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLG----LVPNSYTFPFLLK 111

Query: 203 A-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
           A A S         QQI   V K G   DLYV ++L++ + + G    ARK+F+Q   ++
Sbjct: 112 ACAKSKAFREG---QQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRD 168

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
           VVS   L++G                             YA  G I  ++ +F  +  KD
Sbjct: 169 VVSYTALIKG-----------------------------YASNGYIXSAQKMFDEIPVKD 199

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            VSWN +ISG  + G Y+EA+  F  M +  +     ++++ LS+CA    I LG+Q+H 
Sbjct: 200 VVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHS 259

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
                G  S++ + NAL+ LY   G +     +F  +   D +SWN++IG +     L  
Sbjct: 260 WIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMN-LYK 318

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY--NVANETTIENA 499
           EA+  + +M R+G SPN VT ++IL A +      +G  +H  + K    V+N +++  +
Sbjct: 319 EALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTS 378

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  Y KCG+++  +++F  M  R    SWN+MI G+  +     A ++   M + G   
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNRSLS-SWNAMIFGFAMHGRANPAFDIFSRMRKDGIEP 437

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           D  TF  +LSAC+    L+ G                 I  ++ + Y    ++++     
Sbjct: 438 DDITFVGLLSACSHSGMLDLGRH---------------IFRSMTEDYKITPKLEHYGCMI 482

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           DL+                  G   +A  + + M++D   PD V +  +L AC   G V+
Sbjct: 483 DLL---------------GHSGLFKEAEEMINSMEMD---PDGVIWCSLLKACKMHGNVE 524

Query: 680 EG 681
            G
Sbjct: 525 LG 526



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 193/451 (42%), Gaps = 84/451 (18%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYV---RVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ H +++K G     +  + LI   V       L  A  +FD + + N + W  +  G+
Sbjct: 19  RIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGH 78

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                   A  ++  M+  G + N Y    +L+AC +     F+ G Q+H  VLK     
Sbjct: 79  ALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKS--KAFREGQQIHGHVLKLGCDL 136

Query: 122 DGLVSNVLIAMYGSCLESTDC------------------------------ARRIFEEIE 151
           D  V   LIAMY       D                               A+++F+EI 
Sbjct: 137 DLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIP 196

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
            +D++SWN++IS Y++ G+     +LF  M +     ++KP+E T  ++++A   S  + 
Sbjct: 197 VKDVVSWNALISGYAETGNYKEALELFKEMMKT----NVKPDESTMVTVLSACAQS--AS 250

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             L +Q+ + +   G  S+L + +AL+  + + G    A  +FE +  K+V+S N L+ G
Sbjct: 251 IELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGG 310

Query: 272 RRK-----------------------------------------GKEVHGYLIR--SGLF 288
                                                       G+ +H Y+ +   G+ 
Sbjct: 311 YTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVS 370

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
           +  ++   L++MYAKCG I+ ++ VF  M+ +   SWN MI G   +G    A   F  M
Sbjct: 371 NPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRM 430

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           R+DG+   + + +  LS+C+  G + LG+ I
Sbjct: 431 RKDGIEPDDITFVGLLSACSHSGMLDLGRHI 461



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 192/404 (47%), Gaps = 32/404 (7%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV     LI  Y   G + SA K+FDE+P ++ VSW  ++SGY   G   EA ++FKEM+
Sbjct: 168 DVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMM 227

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           +     +   + +VL AC +   +  + G QVH  +       +  + N LI +Y  C E
Sbjct: 228 KTNVKPDESTMVTVLSACAQS--ASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE 285

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             + A  +FE +  +D+ISWN++I  Y+          LF  M R G      PNE T  
Sbjct: 286 -VETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG----ESPNEVTML 340

Query: 199 SLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           S++ A     ++  G ++   I   +K  G+ +   + ++L+  +A+ G+   A+++F+ 
Sbjct: 341 SILPACAHLGAIDIGRWIHVYIDKRLK--GVSNPSSLRTSLIDMYAKCGDIEAAQQVFDS 398

Query: 257 MIQKNVVSMNGL-----MEGRRKGK-EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDS 310
           M+ +++ S N +     M GR     ++   + + G+        GL++  +  G +D  
Sbjct: 399 MLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLG 458

Query: 311 RSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLIST 363
           R +FR M     ++     +  MI  L  +G ++EA  ++N   M  DG++       S 
Sbjct: 459 RHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVI-----WCSL 513

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAG 406
           L +C   G + LG+      +K  ++   S S  LLS +YA AG
Sbjct: 514 LKACKMHGNVELGESFAQNLIK--IEPKNSGSYVLLSNIYATAG 555


>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 229/600 (38%), Positives = 340/600 (56%), Gaps = 38/600 (6%)

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           L  + LG Q+H   L  GL     V + +++ YA +G +   + VF  + E   + +NS+
Sbjct: 83  LNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSM 142

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           I A+A         V  Y  M   G++ +  TF  +L ++       +G  VH  +++  
Sbjct: 143 IRAYA-RYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIG 201

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSER-------------------------- 523
           +  +  +  +L+  YGKCGE++D  K+F  M+ R                          
Sbjct: 202 LQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFE 261

Query: 524 ----RDEVSWNSMISGYIHNELLPKAMNLVWFMMQR--GQRLDHFTFATVLSACASVATL 577
               R+ VSW +MISGY  + L  +A++L   M++   G R +  T  +VL ACA ++TL
Sbjct: 262 RMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTL 321

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP--VRNVYSWNSMIS 635
           ERG ++H    R  L  +  +  AL  MY+KCG +  A   FD +    +N+ +WN+MI+
Sbjct: 322 ERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMIT 381

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
            YA +GHG +A++ F +M   G  PD +TF G+LS CSH+GLVD G K+F  MS  Y + 
Sbjct: 382 AYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSIN 441

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           P++E ++C+ DLLGRAG L +  + + +MP+     IW ++L AC +   R  E+   AA
Sbjct: 442 PRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKH--RNLEMAETAA 499

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
             LF +EP+N  NYVLL+NMYA  G+W++V K R  +K    KK  GCSW+ +    H+F
Sbjct: 500 RKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMF 559

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
           + GD SHP+   IY  L+ L +KM+ AGY P T + L D+  E KE  +  HSEK+AVAF
Sbjct: 560 LGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAF 619

Query: 876 -VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            +L   ++  +R+ KNLR+CGDCH+A  FIS+I GRE+++RD NRFHHF  G CSCGDYW
Sbjct: 620 GILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 679



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 190/412 (46%), Gaps = 37/412 (8%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           + G +VH +++  GL     VG+ +V  YA  G ID S SVF  +    S+ +N+MI   
Sbjct: 87  KLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAY 146

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD--- 389
            + G  E  +  + +M   G     F+    L S   L  + +G+ +HG  L++GL    
Sbjct: 147 ARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDL 206

Query: 390 ----------------------------SDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
                                        DVS  NALL+ Y  +G +   L +F  MP  
Sbjct: 207 YVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWR 266

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRR--AGWSPNGVTFINILAAASSFSMGKLGH 479
           + VSW ++I  ++ S  L  +A+  + +M +  +G  PN VT +++L A +  S  + G 
Sbjct: 267 NIVSWTTMISGYSQS-GLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGR 325

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE-RRDEVSWNSMISGYIH 538
           Q+H    +  + +  ++  AL + Y KCG + D    F +++   ++ ++WN+MI+ Y  
Sbjct: 326 QIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYAS 385

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-VHACGVRACLEFDVV 597
                +A++    M+Q G + D  TF  +LS C+    ++ G++  +       +   V 
Sbjct: 386 YGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVE 445

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYARHGHGDKALT 648
             + + D+  + GR+  AS+    MP+    S W S+++   +H + + A T
Sbjct: 446 HYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAET 497



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 113/441 (25%), Positives = 200/441 (45%), Gaps = 50/441 (11%)

Query: 104 FKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS 163
            K G QVH  +L        LV + ++A Y S  +  D +  +F  I     + +NS+I 
Sbjct: 86  LKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGD-IDSSVSVFNGIGEPSSLLFNSMIR 144

Query: 164 VYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVK 223
            Y++ G        +  M   GF      + +TF  ++ +  S  L   ++ + +  ++ 
Sbjct: 145 AYARYGFAERTVATYFSMHSWGF----TGDYFTFPFVLKS--SVELLSVWMGKCVHGLIL 198

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLI 283
           + GL  DLYV ++L+  + + G    A K+F+ M  ++V S N L+ G            
Sbjct: 199 RIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAG------------ 246

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
                            Y K G ID + ++F  M  ++ VSW TMISG  Q+G  ++A+ 
Sbjct: 247 -----------------YTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALS 289

Query: 344 NFCAMRRD--GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
            F  M ++  G+  +  +++S L +CA L  +  G+QIH    ++GL+S+ SV  AL ++
Sbjct: 290 LFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAM 349

Query: 402 YADAGYLSRCLKVFFLM--PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
           YA  G L      F  +   E + ++WN++I A+A S     +AV  + +M +AG  P+ 
Sbjct: 350 YAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYA-SYGHGLQAVSTFREMIQAGIQPDD 408

Query: 460 VTFINILAAASSFSMGKLG-----HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
           +TF  +L+  S   +  +G     H      I   V +   + + L    G+ G + +  
Sbjct: 409 ITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLL----GRAGRLAEAS 464

Query: 515 KIFARMSERRDEVSWNSMISG 535
           K+   M        W S+++ 
Sbjct: 465 KLVGEMPMPAGPSIWGSLLAA 485



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 181/394 (45%), Gaps = 34/394 (8%)

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           S   +S  ++  L    A   P  +++  +    +  +M KLGHQVHA ++   +     
Sbjct: 47  SPLTISATLQNLLQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTAL 106

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           + + +++ Y   G++D    +F  + E    + +NSMI  Y       + +   + M   
Sbjct: 107 VGSKMVAFYASSGDIDSSVSVFNGIGE-PSSLLFNSMIRAYARYGFAERTVATYFSMHSW 165

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G   D+FTF  VL +   + ++  G  VH   +R  L+FD+ + ++L+ +Y KCG I+ A
Sbjct: 166 GFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDA 225

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
            + FD M +R+V SWN++++GY + G  D AL +F +M    P  + V++  ++S  S +
Sbjct: 226 GKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERM----PWRNIVSWTTMISGYSQS 281

Query: 676 GLVDEGFKHFKSM-SQVYGLIPQLEQFSCMVDLLGRAGELDK---IEEFINKMPITPNS- 730
           GL  +    F  M  +  G+ P       ++    +   L++   I E   +M +  N+ 
Sbjct: 282 GLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNAS 341

Query: 731 -LIWRTVLGACCRA-----NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
            LI  T + A C +     NC   +L R   N++       A N ++ A  YAS G    
Sbjct: 342 VLIALTAMYAKCGSLVDARNCFD-KLNRNEKNLI-------AWNTMITA--YASYGHGLQ 391

Query: 785 VAKARKAMKEAEVKKE--------AGCSWVTMKD 810
                + M +A ++ +        +GCS   + D
Sbjct: 392 AVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVD 425



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 42/240 (17%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD-------------------- 44
           K  H  IL+ G  +D+++  +LI +Y + G++  A K+FD                    
Sbjct: 191 KCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKS 250

Query: 45  -----------EMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR--AGFLLNRYALGS 91
                       MP RN VSW  ++SGY+  G++ +A  +F EMV+  +G   N   + S
Sbjct: 251 GCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMS 310

Query: 92  VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI- 150
           VL AC +   S  + G Q+H L  +     +  V   L AMY  C    D AR  F+++ 
Sbjct: 311 VLPACAQL--STLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVD-ARNCFDKLN 367

Query: 151 -ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
              ++LI+WN++I+ Y+  G  +     F  M + G    ++P++ TF  L++    S L
Sbjct: 368 RNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAG----IQPDDITFTGLLSGCSHSGL 423


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/665 (36%), Positives = 376/665 (56%), Gaps = 22/665 (3%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+ +H + I +GL   + V   L++MY KC  + D+  +F  M  +D V+WN M++G   
Sbjct: 29  GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAH 88

Query: 335 NGCYEEAIMNFCAMRRD--GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD- 391
           +G Y  A+ +  +M+     L  +  +L++ L   A  G +  G  +H   ++  L  + 
Sbjct: 89  HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNR 148

Query: 392 ---------VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
                    V +  ALL +YA  G L    +VF  MP  ++V+W+++IG F     + ++
Sbjct: 149 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRM-TQ 207

Query: 443 AVKYYLDMRRAGW---SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
           A   +  M   G    SP  +   + L A +S    ++G Q+HA + K  V  + T  N+
Sbjct: 208 AFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNS 265

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           LLS Y K G +D    +F  M+ + D VS+++++SGY+ N    +A  +   M       
Sbjct: 266 LLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEP 324

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           D  T  +++ AC+ +A L+ G   H   +   L  +  I +AL+DMY+KCGRID + + F
Sbjct: 325 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 384

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           ++MP R++ SWN+MI+GY  HG G +A  LF +M   G  PD VTF+ +LSACSH+GLV 
Sbjct: 385 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 444

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           EG   F  M   YGL P++E + CMVDLL R G LD+  EFI  MP+  +  +W  +LGA
Sbjct: 445 EGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 504

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKK 799
            CR   +  +LG+K + M+ E+ P+   N+VLL+N+Y++ G++++ A+ R   K    KK
Sbjct: 505 -CRVY-KNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKK 562

Query: 800 EAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES 859
             GCSW+ +   +H FV GD+SHP+   IY +L  +   ++  GY P T F L DLE E 
Sbjct: 563 SPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEE 622

Query: 860 KEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSN 918
           KE  +  HSEK+A+A+ +L+ +    I + KNLRVCGDCH+  K IS +  R I++RD+N
Sbjct: 623 KEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDAN 682

Query: 919 RFHHF 923
           RFHHF
Sbjct: 683 RFHHF 687



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 233/508 (45%), Gaps = 57/508 (11%)

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
           M+R     N Y     L+AC     +    G  +H   + +    D  VS  L+ MY  C
Sbjct: 1   MLRHRVAPNNYTFPFALKACSAL--ADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKC 58

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
               D A  IF  +  RDL++WN++++ Y+  G           MQ +  R  L+PN  T
Sbjct: 59  ACLPDAAH-IFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR--LRPNAST 115

Query: 197 FGSLIT--AAYSSVLSGS----YLLQQILAMVK--KAGLLSDLYVGSALVSGFARLGNFY 248
             +L+   A   ++  G+    Y ++  L   +  K+ L   + +G+AL+  +A+ G+  
Sbjct: 116 LVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLL 175

Query: 249 YARKIFEQMIQKNVVSMNGLMEG------------------------------------- 271
           YAR++F+ M  +N V+ + L+ G                                     
Sbjct: 176 YARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRAC 235

Query: 272 -----RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                 R G+++H  L +SG+   +  GN L++MYAK G ID + ++F  M  KD+VS++
Sbjct: 236 ASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYS 295

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            ++SG  QNG  EEA + F  M+   +     +++S + +C+ L  +  G+  HG  +  
Sbjct: 296 ALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR 355

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
           GL S+ S+ NAL+ +YA  G +    +VF +MP  D VSWN++I  +     L  EA   
Sbjct: 356 GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYG-IHGLGKEATAL 414

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYG 505
           +L+M   G+ P+GVTFI +L+A S   +   G H  H     Y +         ++    
Sbjct: 415 FLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLS 474

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMI 533
           + G +D+  +    M  R D   W +++
Sbjct: 475 RGGFLDEAYEFIQSMPLRADVRVWVALL 502



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 217/450 (48%), Gaps = 26/450 (5%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M R  +  +N++    L +C++L     G+ IH   +  GL +D+ VS ALL +Y     
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA--GWSPNGVTFINI 465
           L     +F  MP  D V+WN+++  +A    +   AV + L M+       PN  T + +
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAH-HGMYHHAVAHLLSMQMQMHRLRPNASTLVAL 119

Query: 466 LAAASSFSMGKLGHQVHAQVI----------KYNVANETTIENALLSCYGKCGEMDDCEK 515
           L   +       G  VHA  I          K  + +   +  ALL  Y KCG +    +
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASV 574
           +F  M   R+EV+W+++I G++    + +A  L   M+ +G   L   + A+ L ACAS+
Sbjct: 180 VFDAMPA-RNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASL 238

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
             L  G ++HA   ++ +  D+  G++L+ MY+K G ID A   FD M V++  S+++++
Sbjct: 239 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALV 298

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
           SGY ++G  ++A  +F +M+     PD  T V ++ ACSH   +  G     S+  + GL
Sbjct: 299 SGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGL 357

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
             +    + ++D+  + G +D   +  N MP + + + W T++     A      LG++A
Sbjct: 358 ASETSICNALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMI-----AGYGIHGLGKEA 411

Query: 755 ANMLFEME----PQNAVNYVLLANMYASGG 780
             +  EM     P + V ++ L +  +  G
Sbjct: 412 TALFLEMNNLGFPPDGVTFICLLSACSHSG 441



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 209/481 (43%), Gaps = 59/481 (12%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H   +  G   D+F+   L+++YV+   L  A+ +F  MP R+ V+W  +++GY H 
Sbjct: 30  RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 89

Query: 65  GMSNEACKMFKEMVRAGFLL--NRYALGSVLRACQECGPSGFKFGMQVHCLVL------- 115
           GM + A      M      L  N   L ++L    + G       +  +C+         
Sbjct: 90  GMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRN 149

Query: 116 -KSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISV 174
            KS  T   L+   L+ MY  C  S   ARR+F+ +  R+ ++W+++I  +         
Sbjct: 150 SKSKLTDGVLLGTALLDMYAKC-GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 208

Query: 175 FKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVG 234
           F LF  M  +G  + L P          A+   +  G    +Q+ A++ K+G+ +DL  G
Sbjct: 209 FLLFKAMLAQGLCF-LSPTSIASALRACASLDHLRMG----EQLHALLAKSGVHADLTAG 263

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------------------- 272
           ++L+S +A+ G    A  +F++M  K+ VS + L+ G                       
Sbjct: 264 NSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVE 323

Query: 273 -------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
                              + G+  HG +I  GL    ++ N L++MYAKCG ID SR V
Sbjct: 324 PDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQV 383

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           F  M  +D VSWNTMI+G   +G  +EA   F  M   G      + I  LS+C+  G +
Sbjct: 384 FNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLV 443

Query: 374 MLGQQ-IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIG 431
           + G+   H  G   GL   +     ++ L +  G+L    +    MP    V  W +++G
Sbjct: 444 IEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLG 503

Query: 432 A 432
           A
Sbjct: 504 A 504


>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 225/572 (39%), Positives = 348/572 (60%), Gaps = 5/572 (0%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L  CA    ++ G+  H + L +GL +D+  SN L+++Y+  G +    +VF  MP    
Sbjct: 71  LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSL 130

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSWN++IG+   +    +EA+   L M+R G   +  T  ++L A ++         +HA
Sbjct: 131 VSWNTMIGSLTQN-GEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
             IK  +     +  ALL  Y KCG M D   +F  M +R   V+W+SM +GY+ NE+  
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDR-SVVTWSSMAAGYVQNEMYE 248

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +A+ L     + G + D F  ++V+ ACA +A +  G +V+A   ++    ++ + S+L+
Sbjct: 249 QALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLI 308

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           DMY+KCG I+ + + F  +  RNV  WN+MISG +RH    + + LF +M+  G  P+ V
Sbjct: 309 DMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDV 368

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TFV VLSAC H GLV +G K+F  M++ + L P +  +SCMVD L RAG++ +  + I+K
Sbjct: 369 TFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISK 428

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           +P   ++ +W ++L A CR +    EL   AA  LF++EP N+ NY+LL+NMYA+ GKW+
Sbjct: 429 LPFNASASMWGSLL-ASCRTH-GNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWD 486

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
           +VAK RK +KE++VKKE G SW+ +KD VH+F+ G+ +HP+   IY KL E+  +++  G
Sbjct: 487 EVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLG 546

Query: 844 YVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFK 902
           Y  +T+  L  +    K++L+ +HSEK+A    +L      PIRIMKNLR+CGDCHS  K
Sbjct: 547 YKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMK 606

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             SK   R++++RD+NRFHHF +G CSCGD+W
Sbjct: 607 LASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 190/375 (50%), Gaps = 4/375 (1%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +GK  H  ++  GL   +   N L+NMY+KCG++D +R VF  M  +  VSWNTMI  L 
Sbjct: 82  QGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLT 141

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           QNG   EA+     M+R+G   S F++ S L +CA+   +   Q +H   +K  +D +V 
Sbjct: 142 QNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVF 201

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V+ ALL +YA  G +   + VF  MP+   V+W+S+   +  +E +  +A+  +      
Sbjct: 202 VATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNE-MYEQALALFRKAWET 260

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G   +     +++ A +  +    G QV+A + K    +   + ++L+  Y KCG +++ 
Sbjct: 261 GLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEES 320

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            K+F R  E+R+ V WN+MISG   +    + M L   M Q G   +  TF +VLSAC  
Sbjct: 321 YKVF-RDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGH 379

Query: 574 VATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WN 631
           +  +++G +      +   L  +V   S +VD  S+ G+I  A      +P     S W 
Sbjct: 380 MGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWG 439

Query: 632 SMISGYARHGHGDKA 646
           S+++    HG+ + A
Sbjct: 440 SLLASCRTHGNLELA 454



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 156/314 (49%), Gaps = 50/314 (15%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G   H  +L      D L SN+LI MY  C  S D AR++F+E+ +R L+SWN++I   +
Sbjct: 83  GKACHAQILLMGLKTDLLTSNILINMYSKC-GSVDFARQVFDEMPSRSLVSWNTMIGSLT 141

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKA 225
           Q G+      L  +MQREG  +S    E+T  S++ A A    LS   LL    A   KA
Sbjct: 142 QNGEENEALDLLLQMQREGTPFS----EFTISSVLCACAAKCALSECQLLH---AFAIKA 194

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-------------- 271
            +  +++V +AL+  +A+ G    A  +FE M  ++VV+ + +  G              
Sbjct: 195 AMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALF 254

Query: 272 RR---------------------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
           R+                           +GK+V+  L +SG    + V + L++MYAKC
Sbjct: 255 RKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKC 314

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G I++S  VFR +  ++ V WN MISGL ++    E ++ F  M++ GL  ++ + +S L
Sbjct: 315 GGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVL 374

Query: 365 SSCASLGWIMLGQQ 378
           S+C  +G +  GQ+
Sbjct: 375 SACGHMGLVKKGQK 388



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 139/270 (51%), Gaps = 15/270 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H QIL  G   D+   N LIN+Y + G +  A ++FDEMP R+ VSW  ++   T  
Sbjct: 84  KACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQN 143

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRAC-QECGPSGFKFGMQVHCLVLKSNQTFDG 123
           G  NEA  +  +M R G   + + + SVL AC  +C  S  +    +H   +K+    + 
Sbjct: 144 GEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQL---LHAFAIKAAMDLNV 200

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V+  L+ +Y  C    D A  +FE +  R +++W+S+ + Y Q         LF    R
Sbjct: 201 FVATALLDVYAKCGLMKD-AVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALF----R 255

Query: 184 EGFRYSLKPNEYTFGSLI--TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           + +   LK +++   S+I   A  ++++ G    +Q+ A++ K+G  S+++V S+L+  +
Sbjct: 256 KAWETGLKHDQFLMSSVICACAGLAAMIEG----KQVNALLSKSGFCSNIFVASSLIDMY 311

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           A+ G    + K+F  + ++NVV  N ++ G
Sbjct: 312 AKCGGIEESYKVFRDVEKRNVVLWNAMISG 341



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 157/327 (48%), Gaps = 18/327 (5%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +L H   +K     +VF+   L++VY + G +  A  +F+ MPDR+ V+W+ + +GY 
Sbjct: 183 ECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYV 242

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
              M  +A  +F++    G   +++ + SV+ AC   G +    G QV+ L+ KS    +
Sbjct: 243 QNEMYEQALALFRKAWETGLKHDQFLMSSVICACA--GLAAMIEGKQVNALLSKSGFCSN 300

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V++ LI MY  C    + + ++F ++E R+++ WN++IS  S+   ++ V  LF +MQ
Sbjct: 301 IFVASSLIDMYAKC-GGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQ 359

Query: 183 REGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           + G    L PN+ TF S+++A      V  G         M K+  L  +++  S +V  
Sbjct: 360 QMG----LSPNDVTFVSVLSACGHMGLVKKGQKYFD---LMTKEHHLAPNVFHYSCMVDT 412

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNG--LMEGRRKGKEVHGYLIRSGLFDMVAVGNG-- 296
            +R G  + A  +  ++      SM G  L   R  G      +    LFD+    +G  
Sbjct: 413 LSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNY 472

Query: 297 --LVNMYAKCGTIDDSRSVFRFMIGKD 321
             L NMYA  G  D+   + + +   D
Sbjct: 473 LLLSNMYAANGKWDEVAKMRKLLKESD 499



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 1/114 (0%)

Query: 561 HFTFA-TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           H +F   +L  CA    L +G   HA  +   L+ D++  + L++MYSKCG +D+A + F
Sbjct: 63  HVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVF 122

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
           D MP R++ SWN+MI    ++G  ++AL L  QM+ +G      T   VL AC+
Sbjct: 123 DEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACA 176


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 257/733 (35%), Positives = 392/733 (53%), Gaps = 89/733 (12%)

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG--KDSVSWNTMISGLDQNGCYE 339
           L RS           LV  +A  G + D+ + F  +    +D+V  N M+S   +     
Sbjct: 85  LFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAA 144

Query: 340 EAIMNFCAMRRDG-LMSSNFSLISTLSSCASLGWIMLGQ--QIHGEGLKLGLDSDVSVSN 396
            A+  F A+   G L   ++S  + +S+   +  +      Q+H   LK G  + +SVSN
Sbjct: 145 PAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSN 204

Query: 397 ALLSLY-----ADAGYLSRCLKVFFLMPEHDQVSW------------------------- 426
           AL++LY      +A + +R  KV   MP+ D ++W                         
Sbjct: 205 ALIALYMKCDTPEASWDAR--KVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDG 262

Query: 427 ------NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
                 N++I  +  S  + ++A + +  M       +  TF ++L+A ++      G  
Sbjct: 263 KFDVVWNAMISGYVQS-GMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKS 321

Query: 481 VHAQVIKY--NVANET--TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY 536
           VH Q+I+   N   E    + NAL++ Y K G++   ++IF  M+  +D VSWN+++SGY
Sbjct: 322 VHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMN-LKDVVSWNTILSGY 380

Query: 537 IHNELLPKAM----------NLVWFMMQRGQ---------------------RLDHFTFA 565
           I +  L KA+          +L W +M  G                      +   +T+A
Sbjct: 381 IDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYA 440

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
             ++AC  +  L+ G ++HA  V+   E     G+AL+ MY+KCG ++ A   F +MP  
Sbjct: 441 GAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNL 500

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
           +  SWN+MIS   +HGHG +AL LF QM  +G  PD ++F+ +L+AC+HAGLVDEGF +F
Sbjct: 501 DSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYF 560

Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANC 745
           +SM + +G+ P  + ++ ++DLLGR+G + +  + I  MP  P   IW  +L   CR N 
Sbjct: 561 ESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSG-CRTN- 618

Query: 746 RKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSW 805
              E G  AA+ LF M PQ+   Y+LL+N Y++ G+W D A+ RK M++  VKKE GCSW
Sbjct: 619 GDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSW 678

Query: 806 VTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVS 865
           + +   +HVF+ GD  HPE   +Y+ L+ +  +MR  GYVP TKF L D+EP  KE ++ 
Sbjct: 679 IEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILF 738

Query: 866 YHSEKIAVAFVLTRNSKLP----IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFH 921
            HSEK+AV F L    KLP    + ++KNLR+CGDCH+A  F+SK VGREIV+RD  RFH
Sbjct: 739 AHSEKLAVGFGLL---KLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFH 795

Query: 922 HFNDGKCSCGDYW 934
           HF DG+CSCG+YW
Sbjct: 796 HFKDGECSCGNYW 808



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 141/581 (24%), Positives = 250/581 (43%), Gaps = 84/581 (14%)

Query: 5   KLFHLQILKHGFAYDVFL-----------CNTLINVYVRVGDLASASKLFDEMPD--RNS 51
           +L HL  L    A    L             +L+  +   G L  A+  FD +P   R++
Sbjct: 68  RLIHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDT 127

Query: 52  VSWACIVSGYTHKGMSNEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQV 110
           V    ++S +    ++  A  +F  ++ +G L  + Y+  +++ A  +          Q+
Sbjct: 128 VLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQL 187

Query: 111 HCLVLKSNQTFDGLVSNVLIAMYGSCLES------------------------------- 139
           HC VLKS       VSN LIA+Y  C                                  
Sbjct: 188 HCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRR 247

Query: 140 --TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
              + AR +FEE++ +  + WN++IS Y Q G     F+LF RM  E     +  +E+TF
Sbjct: 248 GDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSE----KVPLDEFTF 303

Query: 198 GSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
            S+++A  ++   + G  +  QI+ +       + L V +ALV+ +++ G    A++IF+
Sbjct: 304 TSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFD 363

Query: 256 QMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
            M  K+VVS N ++ G                             Y   G +D +  VF+
Sbjct: 364 TMNLKDVVSWNTILSG-----------------------------YIDSGCLDKAVEVFK 394

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M  K+ +SW  M+SG    G  E+A+  F  MR + +   +++    +++C  LG +  
Sbjct: 395 VMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKH 454

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G+Q+H   ++ G ++  S  NALL++YA  G ++    VF +MP  D VSWN++I A   
Sbjct: 455 GRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALG- 513

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANET 494
                 EA++ +  M   G  P+ ++F+ IL A +   +   G H   +    + ++   
Sbjct: 514 QHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGE 573

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
                L+   G+ G + +   +   M        W +++SG
Sbjct: 574 DHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSG 614



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 137/307 (44%), Gaps = 18/307 (5%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV   NT+++ Y+  G L  A ++F  MP +N +SW  +VSGY H G+S +A K+F +M 
Sbjct: 369 DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMR 428

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
                   Y     + AC E G    K G Q+H  +++          N L+ MY  C  
Sbjct: 429 AEDVKPCDYTYAGAIAACGELG--ALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGA 486

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             D AR +F  +   D +SWN++IS   Q G      +LF +M  EG    + P+  +F 
Sbjct: 487 VND-ARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEG----IDPDRISFL 541

Query: 199 SLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           +++TA   + L   G +  +   +M +  G+       + L+    R G    AR + + 
Sbjct: 542 TILTACNHAGLVDEGFHYFE---SMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKT 598

Query: 257 MIQKNVVSM-NGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDS 310
           M  +   S+   ++ G R  G    G      LF M+   +G    L N Y+  G   D+
Sbjct: 599 MPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDA 658

Query: 311 RSVFRFM 317
             V + M
Sbjct: 659 ARVRKLM 665



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 15/204 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H  +++ GF       N L+ +Y + G +  A  +F  MP+ +SVSW  ++S  
Sbjct: 453 KHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISAL 512

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKF--GMQVHCLVLKS 117
              G   EA ++F +MV  G   +R +  ++L AC   G    GF +   M+    +   
Sbjct: 513 GQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPG 572

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRI-FEEIETRDLISWNSIISVYSQRGD----TI 172
              +  L+   L+   G   E+ D  + + FE   +     W +I+S     GD      
Sbjct: 573 EDHYARLID--LLGRSGRIGEARDLIKTMPFEPTPS----IWEAILSGCRTNGDMEFGAY 626

Query: 173 SVFKLFSRMQREGFRYSLKPNEYT 196
           +  +LF  + +    Y L  N Y+
Sbjct: 627 AADQLFRMIPQHDGTYILLSNTYS 650


>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
          Length = 690

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/675 (35%), Positives = 374/675 (55%), Gaps = 18/675 (2%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R G ++H  L++ G      + N L++MYAKCG +  +  VF  M  ++ VSW  ++ G 
Sbjct: 21  RGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGF 80

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
             +G   E +  F  MR  G   + F+L +TL +C   G    G QIHG  ++ G +   
Sbjct: 81  LHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEGHD 138

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V+N+L+ +Y+   +     +VF ++P  +  +WNS+I  +A +       + +    RR
Sbjct: 139 VVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRR 198

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV--ANETTIENALLSCYGKCGEM 510
               P+  TF ++L A S     + G QVHA +    V  A+   +  ALL  Y KC  +
Sbjct: 199 HDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRL 258

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
               ++F  + ERR+ + W ++I G+     + +AM L       G R D    ++V++ 
Sbjct: 259 PVAMQVFDGL-ERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAV 317

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
            A  A +E+G +VH    +     DV + ++LVDMY KCG    A R F  MP RNV SW
Sbjct: 318 FADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSW 377

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
            +MI+G  +HGHG +A+ LF +M+ +G   D V ++ +LSACSH+GLVDE  ++F  + Q
Sbjct: 378 TAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQ 437

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
              + P+ E ++CMVDLLGRAGEL + +E I  MP+ P   +W+T+L A CR + +   +
Sbjct: 438 DRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSA-CRVH-KDVAV 495

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
           GR+  ++L  ++  N VNYV+L+N+ A  G+W +    R AM+   ++K+ GCSW  +  
Sbjct: 496 GREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDK 555

Query: 811 GVHVFV-AGDESHPEKDLIYEKLKELNQKMRDA-GYVPQTKFALFDLEPESKEDLVSYHS 868
            VH F   GD++HP+   I   L+E+  +MR+  GY    + AL D++ ES+ + +  HS
Sbjct: 556 EVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVDEESRVESLREHS 615

Query: 869 EKIAVAFVLTRNSKLP---------IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNR 919
           E++AV   L R+             +R+ KNLRVCGDCH   K +S +V R +V+RD+NR
Sbjct: 616 ERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRVVVVRDANR 675

Query: 920 FHHFNDGKCSCGDYW 934
           FH F +G CSC DYW
Sbjct: 676 FHRFQNGACSCRDYW 690



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 204/410 (49%), Gaps = 53/410 (12%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  ++K GF  D  L N LI++Y + G L  A ++FD MP+RN VSW  ++ G+ H G 
Sbjct: 26  LHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGE 85

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           + E  ++F EM  +G   N + L + L+AC      G + G+Q+H + +++      +V+
Sbjct: 86  ARECLRLFGEMRGSGTSPNEFTLSATLKAC----GGGTRAGVQIHGVCVRTGFEGHDVVA 141

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+ MY     + D ARR+F+ I +R+L +WNS+IS Y+  G       +F  MQR   
Sbjct: 142 NSLVVMYSKGRWTGD-ARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQR--- 197

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL--LSDLYVGSALVSGFARL 244
           R+  +P+E+TF SL+ A   S L  +    Q+ A +   G+   S+  +  AL+  + + 
Sbjct: 198 RHDEQPDEFTFASLLKAC--SGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKC 255

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG--------------RR----------------- 273
                A ++F+ + ++N +    ++ G              RR                 
Sbjct: 256 HRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVV 315

Query: 274 ----------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                     +GK+VH Y  ++     V+V N LV+MY KCG   ++   FR M  ++ V
Sbjct: 316 AVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVV 375

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           SW  MI+G+ ++G   EAI  F  M+ +G+ +   + ++ LS+C+  G +
Sbjct: 376 SWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLV 425



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/234 (34%), Positives = 126/234 (53%), Gaps = 5/234 (2%)

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           ++L A++  S  + G Q+HA ++K    ++T + N L+  Y KCG++    ++F  M E 
Sbjct: 9   DLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPE- 67

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
           R+ VSW +++ G++H+    + + L   M   G   + FT +  L AC        G+++
Sbjct: 68  RNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQI 125

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           H   VR   E   V+ ++LV MYSK      A R FD++P RN+ +WNSMISGYA  G G
Sbjct: 126 HGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQG 185

Query: 644 DKALTLFSQM-KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
             +L +F +M +     PD  TF  +L ACS  G   EG +   +M+ V G+ P
Sbjct: 186 RDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMA-VRGVSP 238



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 103/502 (20%), Positives = 208/502 (41%), Gaps = 58/502 (11%)

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
           R  +  +LRA      S  + G+Q+H  ++K     D +++N LI MY  C      A  
Sbjct: 4   RRMIADLLRASAR--GSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKC-GKLHMAGE 60

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           +F+ +  R+++SW +++  +   G+     +LF  M+  G      PNE+T  + + A  
Sbjct: 61  VFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSG----TSPNEFTLSATLKACG 116

Query: 206 SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
               +G     QI  +  + G      V ++LV  +++      AR++F+ +  +N+ + 
Sbjct: 117 GGTRAGV----QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATW 172

Query: 266 NGLMEG------------------------------------------RRKGKEVHGYLI 283
           N ++ G                                           R+G +VH  + 
Sbjct: 173 NSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMA 232

Query: 284 RSGLFDM--VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
             G+       +   L+++Y KC  +  +  VF  +  ++++ W T+I G  Q G  +EA
Sbjct: 233 VRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEA 292

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +  F      G+ +    L S ++  A    +  G+Q+H    K     DVSV+N+L+ +
Sbjct: 293 MCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDM 352

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y   G      + F  MP  + VSW ++I           EA+  + +M+  G   + V 
Sbjct: 353 YLKCGLTGEAGRRFREMPARNVVSWTAMINGVG-KHGHGREAIDLFEEMQAEGVEADEVA 411

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA-LLSCYGKCGEMDDCEKIFARM 520
           ++ +L+A S   +     +  +++ +           A ++   G+ GE+ + +++   M
Sbjct: 412 YLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSM 471

Query: 521 SERRDEVSWNSMISG-YIHNEL 541
                   W +++S   +H ++
Sbjct: 472 PMEPTVGVWQTLLSACRVHKDV 493



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 32/209 (15%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
            A +L A A  ++L  G+++HA  ++     D ++ + L+DMY+KCG++  A   FD MP
Sbjct: 7   IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS---------H 674
            RNV SW +++ G+  HG   + L LF +M+  G  P+  T    L AC          H
Sbjct: 67  ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIH 126

Query: 675 AGLVDEGFKHFKSMS-----------------QVYGLIP--QLEQFSCMVDLLGRAGE-- 713
              V  GF+    ++                 +V+ +IP   L  ++ M+     AG+  
Sbjct: 127 GVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGR 186

Query: 714 --LDKIEEFINKMPITPNSLIWRTVLGAC 740
             L    E   +    P+   + ++L AC
Sbjct: 187 DSLLVFREMQRRHDEQPDEFTFASLLKAC 215



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 49/99 (49%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H    K     DV + N+L+++Y++ G    A + F EMP RN VSW  +++G 
Sbjct: 325 EQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGV 384

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   EA  +F+EM   G   +  A  ++L AC   G
Sbjct: 385 GKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSG 423


>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
          Length = 886

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/675 (35%), Positives = 374/675 (55%), Gaps = 18/675 (2%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R G ++H  L++ G      + N L++MYAKCG +  +  VF  M  ++ VSW  ++ G 
Sbjct: 217 RGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGF 276

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
             +G   E +  F  MR  G   + F+L +TL +C   G    G QIHG  ++ G +   
Sbjct: 277 LHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEGHD 334

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V+N+L+ +Y+   +     +VF ++P  +  +WNS+I  +A +       + +    RR
Sbjct: 335 VVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRR 394

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV--ANETTIENALLSCYGKCGEM 510
               P+  TF ++L A S     + G QVHA +    V  A+   +  ALL  Y KC  +
Sbjct: 395 HDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRL 454

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
               ++F  + ERR+ + W ++I G+     + +AM L       G R D    ++V++ 
Sbjct: 455 PVAMQVFDGL-ERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAV 513

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
            A  A +E+G +VH    +     DV + ++LVDMY KCG    A R F  MP RNV SW
Sbjct: 514 FADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSW 573

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
            +MI+G  +HGHG +A+ LF +M+ +G   D V ++ +LSACSH+GLVDE  ++F  + Q
Sbjct: 574 TAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQ 633

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
              + P+ E ++CMVDLLGRAGEL + +E I  MP+ P   +W+T+L A CR + +   +
Sbjct: 634 DRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSA-CRVH-KDVAV 691

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
           GR+  ++L  ++  N VNYV+L+N+ A  G+W +    R AM+   ++K+ GCSW  +  
Sbjct: 692 GREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDK 751

Query: 811 GVHVFV-AGDESHPEKDLIYEKLKELNQKMRDA-GYVPQTKFALFDLEPESKEDLVSYHS 868
            VH F   GD++HP+   I   L+E+  +MR+  GY    + AL D++ ES+ + +  HS
Sbjct: 752 EVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVDEESRVESLREHS 811

Query: 869 EKIAVAFVLTRNSKLP---------IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNR 919
           E++AV   L R+             +R+ KNLRVCGDCH   K +S +V R +V+RD+NR
Sbjct: 812 ERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRVVVVRDANR 871

Query: 920 FHHFNDGKCSCGDYW 934
           FH F +G CSC DYW
Sbjct: 872 FHRFQNGACSCRDYW 886



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 204/410 (49%), Gaps = 53/410 (12%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  ++K GF  D  L N LI++Y + G L  A ++FD MP+RN VSW  ++ G+ H G 
Sbjct: 222 LHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGE 281

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           + E  ++F EM  +G   N + L + L+AC      G + G+Q+H + +++      +V+
Sbjct: 282 ARECLRLFGEMRGSGTSPNEFTLSATLKACG----GGTRAGVQIHGVCVRTGFEGHDVVA 337

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+ MY     + D ARR+F+ I +R+L +WNS+IS Y+  G       +F  MQR   
Sbjct: 338 NSLVVMYSKGRWTGD-ARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQR--- 393

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL--LSDLYVGSALVSGFARL 244
           R+  +P+E+TF SL+ A   S L  +    Q+ A +   G+   S+  +  AL+  + + 
Sbjct: 394 RHDEQPDEFTFASLLKAC--SGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKC 451

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG--------------RR----------------- 273
                A ++F+ + ++N +    ++ G              RR                 
Sbjct: 452 HRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVV 511

Query: 274 ----------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                     +GK+VH Y  ++     V+V N LV+MY KCG   ++   FR M  ++ V
Sbjct: 512 AVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVV 571

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           SW  MI+G+ ++G   EAI  F  M+ +G+ +   + ++ LS+C+  G +
Sbjct: 572 SWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLV 621



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/234 (34%), Positives = 126/234 (53%), Gaps = 5/234 (2%)

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           ++L A++  S  + G Q+HA ++K    ++T + N L+  Y KCG++    ++F  M E 
Sbjct: 205 DLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPE- 263

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
           R+ VSW +++ G++H+    + + L   M   G   + FT +  L AC        G+++
Sbjct: 264 RNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQI 321

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           H   VR   E   V+ ++LV MYSK      A R FD++P RN+ +WNSMISGYA  G G
Sbjct: 322 HGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQG 381

Query: 644 DKALTLFSQM-KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
             +L +F +M +     PD  TF  +L ACS  G   EG +   +M+ V G+ P
Sbjct: 382 RDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMA-VRGVSP 434



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/509 (20%), Positives = 211/509 (41%), Gaps = 60/509 (11%)

Query: 81  GFLL--NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           GFL    R  +  +LRA      S  + G+Q+H  ++K     D +++N LI MY  C  
Sbjct: 193 GFLPMERRRMIADLLRASAR--GSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKC-G 249

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
               A  +F+ +  R+++SW +++  +   G+     +LF  M+  G      PNE+T  
Sbjct: 250 KLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSG----TSPNEFTLS 305

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           + + A      +G     QI  +  + G      V ++LV  +++      AR++F+ + 
Sbjct: 306 ATLKACGGGTRAGV----QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIP 361

Query: 259 QKNVVSMNGLMEG------------------------------------------RRKGK 276
            +N+ + N ++ G                                           R+G 
Sbjct: 362 SRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGA 421

Query: 277 EVHGYLIRSGLFDM--VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           +VH  +   G+       +   L+++Y KC  +  +  VF  +  ++++ W T+I G  Q
Sbjct: 422 QVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQ 481

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G  +EA+  F      G+ +    L S ++  A    +  G+Q+H    K     DVSV
Sbjct: 482 EGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSV 541

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           +N+L+ +Y   G      + F  MP  + VSW ++I           EA+  + +M+  G
Sbjct: 542 ANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVG-KHGHGREAIDLFEEMQAEG 600

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA-LLSCYGKCGEMDDC 513
              + V ++ +L+A S   +     +  +++ +           A ++   G+ GE+ + 
Sbjct: 601 VEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREA 660

Query: 514 EKIFARMSERRDEVSWNSMISG-YIHNEL 541
           +++   M        W +++S   +H ++
Sbjct: 661 KELILSMPMEPTVGVWQTLLSACRVHKDV 689



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 4/129 (3%)

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +A++L+ F+    +R+     A +L A A  ++L  G+++HA  ++     D ++ + L+
Sbjct: 187 RAIDLLGFLPMERRRM----IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLI 242

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           DMY+KCG++  A   FD MP RNV SW +++ G+  HG   + L LF +M+  G  P+  
Sbjct: 243 DMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEF 302

Query: 664 TFVGVLSAC 672
           T    L AC
Sbjct: 303 TLSATLKAC 311



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 49/99 (49%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H    K     DV + N+L+++Y++ G    A + F EMP RN VSW  +++G 
Sbjct: 521 EQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGV 580

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   EA  +F+EM   G   +  A  ++L AC   G
Sbjct: 581 GKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSG 619


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/661 (36%), Positives = 370/661 (55%), Gaps = 46/661 (6%)

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           SVF+ +   + + WNTM  G   +     A+  +  M   GL+ ++++    L SCA   
Sbjct: 89  SVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSK 148

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLY----------------------------- 402
               GQQIHG  LKLG D D+ V  +L+S+Y                             
Sbjct: 149 AFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIK 208

Query: 403 --ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
             A  GY+    K+F  +P  D VSWN++I  +A++     EA++ + DM +    P+  
Sbjct: 209 GYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAET-GNYKEALELFKDMMKTNVRPDES 267

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           T + +++A +     +LG QVH  +  +   +   I NAL+  Y KCGE++    +F R+
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 327

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
              +D +SWN++I GY H  L  +A+ L   M++ G+  +  T  ++L ACA +  ++ G
Sbjct: 328 P-YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386

Query: 581 MEVHAC------GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
             +H        GV         + ++L+DMY+KCG I+ A + F+ +  +++ SWN+MI
Sbjct: 387 RWIHVYIDKRLKGVTNASS----LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
            G+A HG  D +  LFS+M+  G  PD +TFVG+LSACSH+G++D G   F++M+Q Y +
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 502

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
            P+LE + CM+DLLG +G   + EE IN M + P+ +IW ++L AC        ELG   
Sbjct: 503 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHG--NVELGESF 560

Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
           A  L ++EP+N  +YVLL+N+YAS G+W +VAK R  + +  +KK  GCS + +   VH 
Sbjct: 561 AENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHE 620

Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVA 874
           F+ GD+ HP    IY  L+E+   +  AG+VP T   L ++E E KE  + +HSEK+A+A
Sbjct: 621 FIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 680

Query: 875 F-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
           F +++      + I+KNLRVC +CH A K ISKI  REI+ RD  RFHHF DG CSC DY
Sbjct: 681 FGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDY 740

Query: 934 W 934
           W
Sbjct: 741 W 741



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 221/493 (44%), Gaps = 66/493 (13%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYV---RVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ H Q++K G     +  + LI   +       L  A  +F  + + N + W  +  G+
Sbjct: 50  RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                   A K++  M+  G L N Y    VL++C +     FK G Q+H  VLK     
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKS--KAFKEGQQIHGHVLKLGCDL 167

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V   LI+MY       D A ++F++   RD++S+ ++I  Y+ RG   +  KLF  +
Sbjct: 168 DLYVHTSLISMYVQNGRLED-AHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEI 226

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
                                                         + D+   +A++SG+
Sbjct: 227 P---------------------------------------------VKDVVSWNAMISGY 241

Query: 242 ARLGNFYYARKIFEQMIQKNV----------VSMNGLMEGRRKGKEVHGYLIRSGLFDMV 291
           A  GN+  A ++F+ M++ NV          VS          G++VH ++   G    +
Sbjct: 242 AETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNL 301

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
            + N L+++Y+KCG ++ +  +F  +  KD +SWNT+I G      Y+EA++ F  M R 
Sbjct: 302 KIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 361

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIH---GEGLKLGLDSDVSVSNALLSLYADAGYL 408
           G   ++ +++S L +CA LG I +G+ IH    + LK G+ +  S+  +L+ +YA  G +
Sbjct: 362 GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK-GVTNASSLRTSLIDMYAKCGDI 420

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
               +VF  +      SWN++I  FA        +   +  MR+ G  P+ +TF+ +L+A
Sbjct: 421 EAAHQVFNSILHKSLSSWNAMIFGFA-MHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479

Query: 469 ASSFSMGKLGHQV 481
            S   M  LG  +
Sbjct: 480 CSHSGMLDLGRHI 492



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 190/402 (47%), Gaps = 38/402 (9%)

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY---LSRCLK 413
           N   +S L +C +L  + +   IH + +K+GL +     + L+     + +   L   + 
Sbjct: 33  NHPSLSLLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAIS 89

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           VF  + E + + WN++    A S   VS A+K Y+ M   G  PN  TF  +L + +   
Sbjct: 90  VFKTIQEPNLLIWNTMFRGHALSSDPVS-ALKLYVCMISLGLLPNSYTFPFVLKSCAKSK 148

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER---------- 523
             K G Q+H  V+K     +  +  +L+S Y + G ++D  K+F +   R          
Sbjct: 149 AFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIK 208

Query: 524 --------------------RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
                               +D VSWN+MISGY       +A+ L   MM+   R D  T
Sbjct: 209 GYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST 268

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
             TV+SACA   ++E G +VH          ++ I +AL+D+YSKCG ++ A   F+ +P
Sbjct: 269 MVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP 328

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG-F 682
            ++V SWN++I GY       +AL LF +M   G  P+ VT + +L AC+H G +D G +
Sbjct: 329 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 388

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
            H     ++ G+       + ++D+  + G+++   +  N +
Sbjct: 389 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 192/417 (46%), Gaps = 34/417 (8%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV     LI  Y   G + +A KLFDE+P ++ VSW  ++SGY   G   EA ++FK+M+
Sbjct: 199 DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM 258

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           +     +   + +V+ AC + G    + G QVH  +       +  + N LI +Y  C E
Sbjct: 259 KTNVRPDESTMVTVVSACAQSG--SIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316

Query: 139 -STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
             T C   +FE +  +D+ISWN++I  Y+          LF  M R G      PN+ T 
Sbjct: 317 LETACG--LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG----ETPNDVTM 370

Query: 198 GSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
            S++ A     ++  G ++   I   +K  G+ +   + ++L+  +A+ G+   A ++F 
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLK--GVTNASSLRTSLIDMYAKCGDIEAAHQVFN 428

Query: 256 QMIQKNVVSMNGL-----MEGRRKGK-EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
            ++ K++ S N +     M GR     ++   + + G+        GL++  +  G +D 
Sbjct: 429 SILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDL 488

Query: 310 SRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNFCAMRR--DGLMSSNFSLIS 362
            R +FR M     ++     +  MI  L  +G ++EA      M    DG++       S
Sbjct: 489 GRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVI-----WCS 543

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLKVFFLM 418
            L +C   G + LG+    E L + ++ +   S  LLS +YA AG  +   K   L+
Sbjct: 544 LLKACKMHGNVELGESF-AENL-IKIEPENPGSYVLLSNIYASAGRWNEVAKTRALL 598



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 140/306 (45%), Gaps = 41/306 (13%)

Query: 481 VHAQVIKY-----NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           +HAQ+IK      N A    IE  +LS + +   +     +F  + E  + + WN+M  G
Sbjct: 52  IHAQMIKIGLHNTNYALSKLIEFCILSPHFE--GLPYAISVFKTIQEP-NLLIWNTMFRG 108

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
           +  +     A+ L   M+  G   + +TF  VL +CA     + G ++H   ++   + D
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168

Query: 596 VVIGSALVDMYSKCGRID-----------------------YASR--------FFDLMPV 624
           + + ++L+ MY + GR++                       YASR         FD +PV
Sbjct: 169 LYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPV 228

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           ++V SWN+MISGYA  G+  +AL LF  M      PD  T V V+SAC+ +G ++ G + 
Sbjct: 229 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG-RQ 287

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
                  +G    L+  + ++DL  + GEL+       ++P   + + W T++G     N
Sbjct: 288 VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGGYTHMN 346

Query: 745 CRKTEL 750
             K  L
Sbjct: 347 LYKEAL 352


>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
 gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
          Length = 690

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/675 (35%), Positives = 374/675 (55%), Gaps = 18/675 (2%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R G ++H  L++ G      + N L++MYAKCG +  +  VF  M  ++ VSW  ++ G 
Sbjct: 21  RGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGF 80

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
             +G   E +  F  MR  G   + F+L +TL +C   G    G QIHG  ++ G +   
Sbjct: 81  LHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEGHD 138

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V+N+L+ +Y+   +     +VF ++P  +  +WNS+I  +A +       + +    RR
Sbjct: 139 VVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRR 198

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV--ANETTIENALLSCYGKCGEM 510
               P+  TF ++L A S     + G QVHA +    V  A+   +  ALL  Y KC  +
Sbjct: 199 HDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRL 258

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
               ++F  + ERR+ + W ++I G+     + +AM L       G R D    ++V++ 
Sbjct: 259 PVAMQVFDGL-ERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAV 317

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
            A  A +E+G +VH    +     DV + ++LVDMY KCG    A R F  MP RNV SW
Sbjct: 318 FADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSW 377

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
            +MI+G  +HGHG +A+ LF +M+ +G   D V ++ +LSACSH+GLVDE  ++F  + Q
Sbjct: 378 TAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQ 437

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
              + P+ E ++CMVDLLGRAGEL + +E I  MP+ P   +W+T+L A CR + +   +
Sbjct: 438 DRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSA-CRVH-KDVAV 495

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
           GR+  ++L  ++  N VNYV+L+N+ A  G+W +    R AM+   ++K+ GCSW  +  
Sbjct: 496 GREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDK 555

Query: 811 GVHVFV-AGDESHPEKDLIYEKLKELNQKMRDA-GYVPQTKFALFDLEPESKEDLVSYHS 868
            VH F   GD++HP+   I   L+E+  +MR+  GY    + AL D++ ES+ + +  HS
Sbjct: 556 EVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVDEESRVESLREHS 615

Query: 869 EKIAVAFVLTRNSKLP---------IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNR 919
           E++AV   L R+             +R+ KNLRVCGDCH   K +S +V R +V+RD+NR
Sbjct: 616 ERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRVVVVRDANR 675

Query: 920 FHHFNDGKCSCGDYW 934
           FH F +G CSC DYW
Sbjct: 676 FHRFQNGACSCRDYW 690



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 204/410 (49%), Gaps = 53/410 (12%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  ++K GF  D  L N LI++Y + G L  A ++FD MP+RN VSW  ++ G+ H G 
Sbjct: 26  LHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGE 85

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           + E  ++F EM  +G   N + L + L+AC      G + G+Q+H + +++      +V+
Sbjct: 86  ARECLRLFGEMRGSGTSPNEFTLSATLKAC----GGGTRAGVQIHGVCVRTGFEGHDVVA 141

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+ MY     + D ARR+F+ I +R+L +WNS+IS Y+  G       +F  MQR   
Sbjct: 142 NSLVVMYSKGRWTGD-ARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQR--- 197

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL--LSDLYVGSALVSGFARL 244
           R+  +P+E+TF SL+ A   S L  +    Q+ A +   G+   S+  +  AL+  + + 
Sbjct: 198 RHDEQPDEFTFASLLKAC--SGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKC 255

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG--------------RR----------------- 273
                A ++F+ + ++N +    ++ G              RR                 
Sbjct: 256 HRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVV 315

Query: 274 ----------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                     +GK+VH Y  ++     V+V N LV+MY KCG   ++   FR M  ++ V
Sbjct: 316 AVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVV 375

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           SW  MI+G+ ++G   EAI  F  M+ +G+ +   + ++ LS+C+  G +
Sbjct: 376 SWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLV 425



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/234 (34%), Positives = 126/234 (53%), Gaps = 5/234 (2%)

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           ++L A++  S  + G Q+HA ++K    ++T + N L+  Y KCG++    ++F  M E 
Sbjct: 9   DLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPE- 67

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
           R+ VSW +++ G++H+    + + L   M   G   + FT +  L AC        G+++
Sbjct: 68  RNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQI 125

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           H   VR   E   V+ ++LV MYSK      A R FD++P RN+ +WNSMISGYA  G G
Sbjct: 126 HGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQG 185

Query: 644 DKALTLFSQM-KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
             +L +F +M +     PD  TF  +L ACS  G   EG +   +M+ V G+ P
Sbjct: 186 RDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMA-VRGVSP 238



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 103/502 (20%), Positives = 208/502 (41%), Gaps = 58/502 (11%)

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
           R  +  +LRA      S  + G+Q+H  ++K     D +++N LI MY  C      A  
Sbjct: 4   RRMIADLLRASAR--GSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKC-GKLHMAGE 60

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           +F+ +  R+++SW +++  +   G+     +LF  M+  G      PNE+T  + + A  
Sbjct: 61  VFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSG----TSPNEFTLSATLKACG 116

Query: 206 SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
               +G     QI  +  + G      V ++LV  +++      AR++F+ +  +N+ + 
Sbjct: 117 GGTRAGV----QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATW 172

Query: 266 NGLMEG------------------------------------------RRKGKEVHGYLI 283
           N ++ G                                           R+G +VH  + 
Sbjct: 173 NSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMA 232

Query: 284 RSGLFDM--VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
             G+       +   L+++Y KC  +  +  VF  +  ++++ W T+I G  Q G  +EA
Sbjct: 233 VRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEA 292

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +  F      G+ +    L S ++  A    +  G+Q+H    K     DVSV+N+L+ +
Sbjct: 293 MCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDM 352

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y   G      + F  MP  + VSW ++I           EA+  + +M+  G   + V 
Sbjct: 353 YLKCGLTGEAGRRFREMPARNVVSWTAMINGVG-KHGHGREAIDLFEEMQEEGVEADEVA 411

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA-LLSCYGKCGEMDDCEKIFARM 520
           ++ +L+A S   +     +  +++ +           A ++   G+ GE+ + +++   M
Sbjct: 412 YLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSM 471

Query: 521 SERRDEVSWNSMISG-YIHNEL 541
                   W +++S   +H ++
Sbjct: 472 PMEPTVGVWQTLLSACRVHKDV 493



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 32/209 (15%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
            A +L A A  ++L  G+++HA  ++     D ++ + L+DMY+KCG++  A   FD MP
Sbjct: 7   IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS---------H 674
            RNV SW +++ G+  HG   + L LF +M+  G  P+  T    L AC          H
Sbjct: 67  ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIH 126

Query: 675 AGLVDEGFKHFKSMS-----------------QVYGLIP--QLEQFSCMVDLLGRAGE-- 713
              V  GF+    ++                 +V+ +IP   L  ++ M+     AG+  
Sbjct: 127 GVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGR 186

Query: 714 --LDKIEEFINKMPITPNSLIWRTVLGAC 740
             L    E   +    P+   + ++L AC
Sbjct: 187 DSLLVFREMQRRHDEQPDEFTFASLLKAC 215



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 49/99 (49%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H    K     DV + N+L+++Y++ G    A + F EMP RN VSW  +++G 
Sbjct: 325 EQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGV 384

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   EA  +F+EM   G   +  A  ++L AC   G
Sbjct: 385 GKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSG 423


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/664 (36%), Positives = 366/664 (55%), Gaps = 11/664 (1%)

Query: 277 EVHGYLIRSG-LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           ++H ++   G L     +   L   YA CG +  ++ +F  ++ K+S  WN+MI G   N
Sbjct: 43  QLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACN 102

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
                A+  +  M   G    NF+    L +C  L    +G+++H   +  GL+ DV V 
Sbjct: 103 NSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVG 162

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA-DSEALVSEAVKYYLDMRRAG 454
           N++LS+Y   G +     VF  M   D  SWN+++  F  + EA    A + + DMRR G
Sbjct: 163 NSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEA--RGAFEVFGDMRRDG 220

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT---IENALLSCYGKCGEMD 511
           +  +  T + +L+A       K+G ++H  V++   +       + N+++  Y  C  + 
Sbjct: 221 FVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVS 280

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
              K+F  +   +D VSWNS+ISGY       +A+ L   M+  G   D  T  +VL+AC
Sbjct: 281 CARKLFEGL-RVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAAC 339

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
             ++ L  G  V +  V+     +VV+G+AL+ MY+ CG +  A R FD MP +N+ +  
Sbjct: 340 NQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACT 399

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
            M++G+  HG G +A+++F +M   G  PD   F  VLSACSH+GLVDEG + F  M++ 
Sbjct: 400 VMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRD 459

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
           Y + P+   +SC+VDLLGRAG LD+    I  M + PN  +W  +L A CR + R  +L 
Sbjct: 460 YSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSA-CRLH-RNVKLA 517

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
             +A  LFE+ P     YV L+N+YA+  +WEDV   R  + +  ++K    S+V +   
Sbjct: 518 VISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKM 577

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
           VH F  GD SH + D IY KLK+LN++++ AGY P T   L+D+E E KE ++  HSE++
Sbjct: 578 VHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERL 637

Query: 872 AVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           A+AF L        IRI KNLRVCGDCH+  K ISK+  REI++RD  RFHHF DG CSC
Sbjct: 638 ALAFALINTGPGTTIRITKNLRVCGDCHTVIKMISKLTNREIIMRDICRFHHFRDGLCSC 697

Query: 931 GDYW 934
           G YW
Sbjct: 698 GGYW 701



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 246/526 (46%), Gaps = 57/526 (10%)

Query: 191 KPNEY-TFGSLITAAYSSVLSGSYLLQQIL---AMVKKAGLLS-DLYVGSALVSGFARLG 245
           KP+   TF SL        L+ S  L Q L   A V   G L  + Y+ + L + +A  G
Sbjct: 13  KPSSTSTFDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCG 72

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEG---------------------------------- 271
           +  YA+ IF+Q++ KN    N ++ G                                  
Sbjct: 73  HMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLK 132

Query: 272 -------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                  R  G++VH  ++  GL + V VGN +++MY K G ++ +R VF  M+ +D  S
Sbjct: 133 ACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTS 192

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           WNTM+SG  +NG    A   F  MRRDG +    +L++ LS+C  +  + +G++IHG  +
Sbjct: 193 WNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVV 252

Query: 385 KLGLDSDVS---VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD-SEALV 440
           + G    V    + N+++ +Y +   +S   K+F  +   D VSWNS+I  +    +A  
Sbjct: 253 RNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAF- 311

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
            +A++ +  M   G  P+ VT I++LAA +  S  +LG  V + V+K        +  AL
Sbjct: 312 -QALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTAL 370

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD 560
           +  Y  CG +    ++F  M E ++  +   M++G+  +    +A+++ + M+ +G   D
Sbjct: 371 IGMYANCGSLVCACRVFDEMPE-KNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPD 429

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFF 619
              F  VLSAC+    ++ G E+     R   +E      S LVD+  + G +D A    
Sbjct: 430 EGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVI 489

Query: 620 DLMPVR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
           + M ++ N   W +++S  A   H +  L + S  KL    PD V+
Sbjct: 490 ENMKLKPNEDVWTALLS--ACRLHRNVKLAVISAQKLFELNPDGVS 533



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 185/348 (53%), Gaps = 23/348 (6%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++  G   DV++ N+++++Y + GD+ +A  +FD M  R+  SW  ++SG+   G +
Sbjct: 147 HALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEA 206

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLK---SNQTFDGL 124
             A ++F +M R GF+ +R  L ++L AC +      K G ++H  V++   S +  +G 
Sbjct: 207 RGAFEVFGDMRRDGFVGDRTTLLALLSACGDV--MDLKVGKEIHGYVVRNGESGRVCNGF 264

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           + N +I MY +C ES  CAR++FE +  +D++SWNS+IS Y + GD     +LF RM   
Sbjct: 265 LMNSIIDMYCNC-ESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVV 323

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G      P+E T  S++ A   + +S   L   + + V K G + ++ VG+AL+  +A  
Sbjct: 324 G----AVPDEVTVISVLAAC--NQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANC 377

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKE---VHGYLIRSGLFDMVAVGNGLV 298
           G+   A ++F++M +KN+ +   ++ G     +G+E   +   ++  G+     +   ++
Sbjct: 378 GSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVL 437

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEA 341
           +  +  G +D+ + +F  M    SV      ++ ++  L + G  +EA
Sbjct: 438 SACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEA 485



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 202/459 (44%), Gaps = 53/459 (11%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           + +L   L   Y   G +  A  +FD++  +NS  W  ++ GY      + A  ++ +M+
Sbjct: 57  NTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKML 116

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             G   + +    VL+AC +      + G +VH LV+      D  V N +++MY     
Sbjct: 117 HFGQKPDNFTYPFVLKACGDLLLR--EMGRKVHALVVVGGLEEDVYVGNSILSMYFK-FG 173

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF------------ 186
             + AR +F+ +  RDL SWN+++S + + G+    F++F  M+R+GF            
Sbjct: 174 DVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLS 233

Query: 187 ----RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAM---------VKK--AGL-LSD 230
                  LK  +   G ++    S  +   +L+  I+ M          +K   GL + D
Sbjct: 234 ACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKD 293

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMI-------QKNVVSMNGL---MEGRRKGKEVHG 280
           +   ++L+SG+ + G+ + A ++F +M+       +  V+S+      +   R G  V  
Sbjct: 294 VVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQS 353

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
           Y+++ G    V VG  L+ MYA CG++  +  VF  M  K+  +   M++G   +G   E
Sbjct: 354 YVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGRE 413

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS----N 396
           AI  F  M   G+        + LS+C+  G +  G++I     K+  D  V       +
Sbjct: 414 AISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIF---YKMTRDYSVEPRPTHYS 470

Query: 397 ALLSLYADAGYLSRCLKVF---FLMPEHDQVSWNSVIGA 432
            L+ L   AGYL     V     L P  D   W +++ A
Sbjct: 471 CLVDLLGRAGYLDEAYAVIENMKLKPNED--VWTALLSA 507



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 9/144 (6%)

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA-CGVRACLEFDVVIG 599
           L+PK  +   F        D     T+L +  +  +L + +++HA       L  +  + 
Sbjct: 10  LIPKPSSTSTF--------DSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLA 61

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           + L   Y+ CG + YA   FD + ++N + WNSMI GYA +    +AL L+ +M   G  
Sbjct: 62  TKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQK 121

Query: 660 PDHVTFVGVLSACSHAGLVDEGFK 683
           PD+ T+  VL AC    L + G K
Sbjct: 122 PDNFTYPFVLKACGDLLLREMGRK 145


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 237/663 (35%), Positives = 368/663 (55%), Gaps = 27/663 (4%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+E+HG+  ++G    V V N L+NMY KCG +  +R VF  M  +D VSW TM+    +
Sbjct: 107 GRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVR 166

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS--DV 392
           +  + EA+     M+  G+  S  +LIS ++   +L  +  G+ +HG  ++   D   +V
Sbjct: 167 SKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEV 226

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
           S++ AL+ +Y   G L+   ++F  + +   VSW  +I     S  L  E  K +  M  
Sbjct: 227 SMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRL-DEGAKNFNRMLE 285

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
               PN +T ++++          LG   HA +++        +  AL+  YGKCG++  
Sbjct: 286 EKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGY 345

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
              +F  + +++D   W+ +IS Y H   + +  NL   M+    + ++ T  ++LS CA
Sbjct: 346 ARALFNGV-KKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCA 404

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
               L+ G   HA   R  LE DV++ +AL++MY+KCG +  A   F+    R++  WN+
Sbjct: 405 EAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNT 464

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           M++G++ HG G +AL LFS+M+  G  P+ +TFV +  ACSH+GL               
Sbjct: 465 MMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGL--------------- 509

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
                +E + C+VDLLGRAG LD+    I  MP+ PN++IW  +L AC     +   LG 
Sbjct: 510 -----MEHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLH--KNLALGE 562

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
            AA  + E++PQN    VL +N+YAS  +W DV   R+AM  + +KKE G SW+ +   V
Sbjct: 563 VAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSV 622

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
           H F +GD++  +   +YE + E+  K+R++GY P T   L +++ E KE  +SYHSEK+A
Sbjct: 623 HHFKSGDKACTQTTKVYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLA 682

Query: 873 VAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
            AF L   +   PIRI+KNLR+C DCH+A K +SKI GR I++RD NRFHHF++G CSC 
Sbjct: 683 TAFGLISTAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCM 742

Query: 932 DYW 934
            YW
Sbjct: 743 GYW 745



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 221/445 (49%), Gaps = 14/445 (3%)

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMR-RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           ++N +IS    N   + +   +  MR  D     NF L S L +CA      LG+++HG 
Sbjct: 54  NYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGF 113

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
             K G  SDV V NAL+++Y   G L     VF  MPE D VSW +++G +  S+A   E
Sbjct: 114 AQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAF-GE 172

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN---ETTIENA 499
           A++   +M+  G   +GV  I+++A   +    K G  VH  +++ NV +   E ++  A
Sbjct: 173 ALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVR-NVGDEKMEVSMTTA 231

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  Y K G +   +++F R+S +R  VSW  MI+G I +  L +       M++     
Sbjct: 232 LIDMYCKGGCLASAQRLFDRLS-KRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFP 290

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           +  T  ++++ C  V TL+ G   HA  +R      + + +AL+DMY KCG++ YA   F
Sbjct: 291 NEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALF 350

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           + +  ++V  W+ +IS YA     D+   LF +M  +   P++VT V +LS C+ AG +D
Sbjct: 351 NGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALD 410

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
            G K   +    +GL   +   + ++++  + G++       N+  +  +  +W T++  
Sbjct: 411 LG-KWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNE-AMQRDIRMWNTMMAG 468

Query: 740 CCRANCRKTELGRKAANMLFEMEPQ 764
                C     G++A  +  EME  
Sbjct: 469 FSMHGC-----GKEALELFSEMESH 488



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 197/404 (48%), Gaps = 56/404 (13%)

Query: 13  KHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACK 72
           K+GFA DVF+CN L+N+Y + G L SA  +FD+MP+R+ VSW  ++  Y       EA +
Sbjct: 116 KNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALR 175

Query: 73  MFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS--NQTFDGLVSNVLI 130
           + +EM   G  L+  AL S++           K G  VH  ++++  ++  +  ++  LI
Sbjct: 176 LVREMQFVGVKLSGVALISLIAVFGNL--LDMKSGRAVHGYIVRNVGDEKMEVSMTTALI 233

Query: 131 AMY--GSCLESTDCARRIFEEIETRDLISWNSIIS--VYSQRGDTISVFKLFSRMQREGF 186
            MY  G CL S   A+R+F+ +  R ++SW  +I+  + S R D  +  K F+RM  E  
Sbjct: 234 DMYCKGGCLAS---AQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGA--KNFNRMLEE-- 286

Query: 187 RYSLKPNEYTFGSLITAA------------YSSVLSGSY-----LLQQILAMVKKAGLL- 228
              L PNE T  SLIT              ++ +L   +     L+  ++ M  K G + 
Sbjct: 287 --KLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVG 344

Query: 229 -----------SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV----VSMNGLME--- 270
                       D+ + S L+S +A +        +F +M+  +V    V+M  L+    
Sbjct: 345 YARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCA 404

Query: 271 ---GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
                  GK  H Y+ R GL   V +   L+NMYAKCG +  +RS+F   + +D   WNT
Sbjct: 405 EAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNT 464

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           M++G   +GC +EA+  F  M   G+  ++ + +S   +C+  G
Sbjct: 465 MMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSG 508



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 120/528 (22%), Positives = 234/528 (44%), Gaps = 70/528 (13%)

Query: 157 SWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ 216
           ++N +IS Y+      + F  +  M+      +   + +   SL+ A   +  S   L +
Sbjct: 54  NYNLLISSYTNNHLPQASFNCYLHMRSND---AAALDNFILPSLLKACAQA--SSGDLGR 108

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN---------- 266
           ++    +K G  SD++V +AL++ + + G    AR +F+QM +++VVS            
Sbjct: 109 ELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSK 168

Query: 267 -------------------------------GLMEGRRKGKEVHGYLIRS-GLFDM-VAV 293
                                          G +   + G+ VHGY++R+ G   M V++
Sbjct: 169 AFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSM 228

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
              L++MY K G +  ++ +F  +  +  VSW  MI+G  ++   +E   NF  M  + L
Sbjct: 229 TTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKL 288

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
             +  +L+S ++ C  +G + LG+  H   L+ G    +++  AL+ +Y   G +     
Sbjct: 289 FPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARA 348

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           +F  + + D   W+ +I A+A    +  +    +++M      PN VT +++L+  +   
Sbjct: 349 LFNGVKKKDVKIWSVLISAYAHVSCM-DQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAG 407

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
              LG   HA + ++ +  +  +E AL++ Y KCG++     +F   + +RD   WN+M+
Sbjct: 408 ALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNE-AMQRDIRMWNTMM 466

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
           +G+  +    +A+ L   M   G   +  TF ++  AC+        ME + C       
Sbjct: 467 AGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGL----MEHYGC------- 515

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARH 640
                   LVD+  + G +D A    + MP+R N   W ++++    H
Sbjct: 516 --------LVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLH 555



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 116/266 (43%), Gaps = 29/266 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K FH  +L++GF   + L   LI++Y + G +  A  LF+ +  ++   W+ ++S Y H 
Sbjct: 312 KWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHV 371

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
              ++   +F EM+      N   + S+L  C E G      G   H  + +     D +
Sbjct: 372 SCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAG--ALDLGKWTHAYINRHGLEVDVI 429

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           +   LI MY  C + T  AR +F E   RD+  WN++++ +S  G      +LFS M+  
Sbjct: 430 LETALINMYAKCGDVT-IARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESH 488

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G    ++PN+ TF S+  A   S L   Y            G L DL           R 
Sbjct: 489 G----VEPNDITFVSIFHACSHSGLMEHY------------GCLVDL---------LGRA 523

Query: 245 GNFYYARKIFEQM-IQKNVVSMNGLM 269
           G+   A  I E M ++ N +    L+
Sbjct: 524 GHLDEAHNIIENMPMRPNTIIWGALL 549



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 128/303 (42%), Gaps = 39/303 (12%)

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
           HQ+HA  IK    N                        F   S    E ++N +IS Y +
Sbjct: 26  HQLHAHFIKTQFHNPHP---------------------FFSQSHFTPEANYNLLISSYTN 64

Query: 539 NELLPKAMNLVWFMMQR-GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
           N L   + N    M       LD+F   ++L ACA  ++ + G E+H    +     DV 
Sbjct: 65  NHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVF 124

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           + +AL++MY KCG +  A   FD MP R+V SW +M+  Y R     +AL L  +M+  G
Sbjct: 125 VCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVG 184

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP--------QLEQFSCMVDLLG 709
                V  + +++      L+D      KS   V+G I         ++   + ++D+  
Sbjct: 185 VKLSGVALISLIAV--FGNLLD-----MKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYC 237

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
           + G L   +   +++  +  S++  TV+ A C  +CR  E  +    ML E    N +  
Sbjct: 238 KGGCLASAQRLFDRL--SKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITL 295

Query: 770 VLL 772
           + L
Sbjct: 296 LSL 298


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1217

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 250/688 (36%), Positives = 373/688 (54%), Gaps = 49/688 (7%)

Query: 256 QMIQKNVVSMNGLMEGR--------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
           ++ QKN       M G+        +  + VH  +I   L    ++G  L+  YA    +
Sbjct: 32  ELDQKNSPKETAFMLGQVLDTYPDLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDV 91

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
             +R VF  +  ++ +  N MI     NG Y E I  F  M    +   +++    L +C
Sbjct: 92  ATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKAC 151

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
           +  G I++G++IHG   K+GL S + V N L+S+Y   G+LS    V   M   D VSWN
Sbjct: 152 SCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWN 211

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           S++  +A ++    +A++   +M     S +  T  ++L A S+                
Sbjct: 212 SLVAGYAQNQRF-DDALEVCREMESVKISHDAGTMASLLPAVSN---------------- 254

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
                 TT EN +             + +F +M  ++  VSWN MI  Y+ N +  +A+ 
Sbjct: 255 ------TTTENVMY-----------VKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVE 296

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
           L   M   G   D  +  +VL AC   + L  G ++H    R  L  ++++ +AL+DMY+
Sbjct: 297 LYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYA 356

Query: 608 KCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVG 667
           KCG +D A   F+ M  R+V SW +MIS Y   G G  A+ LFS+M+  G +PD + FV 
Sbjct: 357 KCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVT 416

Query: 668 VLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPIT 727
            L+ACSHAGL++EG   FK M+  Y + P+LE  +CMVDLLGRAG++ +  +FI +MP+ 
Sbjct: 417 TLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPME 476

Query: 728 PNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
           PN  +W  +LGA CR +   T++G  AA+ LF++ P+ +  YVLL+N+YA  G+WE+V  
Sbjct: 477 PNERVWGALLGA-CRVHS-NTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTN 534

Query: 788 ARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQ 847
            R  MK   +KK  G S V +   +H F+ GD SHP+   IY +L  L +KM++ GYVP 
Sbjct: 535 IRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELGYVPD 594

Query: 848 TKFALFDLEPESKEDLVSYHSEKIAVAFVL----TRNSKLPIRIMKNLRVCGDCHSAFKF 903
           ++ AL D+E E KE  ++ HSEK+A+ F L      +S   IRI KNLR+CGDCH A K 
Sbjct: 595 SESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNAIRITKNLRICGDCHVAAKL 654

Query: 904 ISKIVGREIVLRDSNRFHHFNDGKCSCG 931
           IS+I  REI++RD+NRFH F  G CSC 
Sbjct: 655 ISQITSREIIIRDTNRFHVFRFGVCSCA 682



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 204/445 (45%), Gaps = 27/445 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H +I+     Y+  L   L+  Y  + D+A+A K+FDE+P+RN +    ++  Y
Sbjct: 57  KTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSY 116

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
            + G   E  ++F  M       + Y    VL+AC   G      G ++H    K   + 
Sbjct: 117 VNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSG--NIVIGKKIHGSATKVGLSS 174

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V N L++MYG C   ++ AR + +E+  RD++SWNS+++ Y+Q        ++   M
Sbjct: 175 TLFVGNGLVSMYGKCGFLSE-ARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREM 233

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLS-----DLYVGSA 236
           +       +  +  T  SL+ A  ++       ++ +   + K  L+S      +Y+ +A
Sbjct: 234 ES----VKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNA 289

Query: 237 LVSGFARLGNFYYARKIFEQMIQ-KNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN 295
           +      L +   A       +   +V+   G       GK++HGY+ R  L   + + N
Sbjct: 290 MPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN 349

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS--GLDQNGCYEEAIMNFCAMRRDGL 353
            L++MYAKCG +D +R VF  M  +D VSW  MIS  G    GC  +A+  F  M+  GL
Sbjct: 350 ALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGC--DAVALFSKMQDSGL 407

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD-----SDVSVSNALLSLYADAGYL 408
           +  + + ++TL++C+  G +  G+       KL  D       +     ++ L   AG +
Sbjct: 408 VPDSIAFVTTLAACSHAGLLEEGRSC----FKLMTDHYKITPRLEHLACMVDLLGRAGKV 463

Query: 409 SRCLKVFFLMP-EHDQVSWNSVIGA 432
               K    MP E ++  W +++GA
Sbjct: 464 KEAYKFIQEMPMEPNERVWGALLGA 488


>gi|293335139|ref|NP_001169604.1| uncharacterized protein LOC100383485 [Zea mays]
 gi|224030331|gb|ACN34241.1| unknown [Zea mays]
          Length = 381

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/388 (54%), Positives = 276/388 (71%), Gaps = 17/388 (4%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           MR+  +  SNF++IS+LSSCA L  +  GQQ+H + +K GLD D SVSN L+ +Y + G 
Sbjct: 1   MRQSCISPSNFAVISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGA 60

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +S   KVF  M EHD+VSWN+++G  A S+  +SE VK + +M R G  PN VTFIN+LA
Sbjct: 61  MSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLA 120

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
           A S  S                V  +  ++NAL+SCY K G+MD CE +F  MS+RRD +
Sbjct: 121 ALSPLS----------------VLEDNVVDNALISCYAKSGDMDSCEHLFTNMSDRRDAI 164

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           SWNSMISGYI+N  L +AM+ VW M+  GQ +D  TF+ +L+ACASVA LERGME+HA G
Sbjct: 165 SWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFG 224

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
           +R+ LE DVV+ SALVDMYSKCGR+DYAS+ F+ M  RN +SWNSMI GYARHG G KA+
Sbjct: 225 IRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMIYGYARHGLGRKAI 284

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDL 707
            +F +M      PDHVTFV VLSAC HAGLV+ G ++F+ M   +G++PQ+E +SC++DL
Sbjct: 285 EIFEEMLRSRESPDHVTFVIVLSACIHAGLVERGLEYFEMMPD-HGILPQIEHYSCVIDL 343

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRT 735
           LGRA ++DKI+E+I +MPI PN+LIWRT
Sbjct: 344 LGRACKIDKIKEYIQRMPIEPNALIWRT 371



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 179/361 (49%), Gaps = 21/361 (5%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G++VH   ++ GL    +V N LV MY +CG + D   VF  M   D VSWNTM+  +  
Sbjct: 29  GQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMAS 88

Query: 335 NGC-YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           +     E +  F  M R GL+ +  + I+ L++ + L  +                 D  
Sbjct: 89  SQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVL----------------EDNV 132

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPE-HDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
           V NAL+S YA +G +  C  +F  M +  D +SWNS+I  +  +  L  EA+     M  
Sbjct: 133 VDNALISCYAKSGDMDSCEHLFTNMSDRRDAISWNSMISGYIYNGNL-QEAMDCVWLMIH 191

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           +G   +  TF  IL A +S +  + G ++HA  I+ ++ ++  +E+AL+  Y KCG +D 
Sbjct: 192 SGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDY 251

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
             K+F  M++ R+E SWNSMI GY  + L  KA+ +   M++  +  DH TF  VLSAC 
Sbjct: 252 ASKLFNSMTQ-RNEFSWNSMIYGYARHGLGRKAIEIFEEMLRSRESPDHVTFVIVLSACI 310

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWN 631
               +ERG+E         +   +   S ++D+  +  +ID    +   MP+  N   W 
Sbjct: 311 HAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRACKIDKIKEYIQRMPIEPNALIWR 370

Query: 632 S 632
           +
Sbjct: 371 T 371



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 149/319 (46%), Gaps = 32/319 (10%)

Query: 85  NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCAR 144
           + +A+ S L +C   G      G QVHC  +K     D  VSNVL+ MYG C   +D   
Sbjct: 9   SNFAVISSLSSCA--GLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSD-YW 65

Query: 145 RIFEEIETRDLISWNSIISVYSQRGDTIS-VFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           ++F  +   D +SWN+++ V +     IS + K+F+ M R G    L PN+ TF +L+ A
Sbjct: 66  KVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGG----LIPNKVTFINLLAA 121

Query: 204 AYS-SVLSGSYLLQQILAMVKKAGLLS-------------DLYVGSALVSGFARLGNFYY 249
               SVL  + +   +++   K+G +              D    ++++SG+   GN   
Sbjct: 122 LSPLSVLEDNVVDNALISCYAKSGDMDSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQE 181

Query: 250 ARKIFEQMIQKN----------VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVN 299
           A      MI             +++    +    +G E+H + IRS L   V V + LV+
Sbjct: 182 AMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVD 241

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
           MY+KCG +D +  +F  M  ++  SWN+MI G  ++G   +AI  F  M R      + +
Sbjct: 242 MYSKCGRVDYASKLFNSMTQRNEFSWNSMIYGYARHGLGRKAIEIFEEMLRSRESPDHVT 301

Query: 360 LISTLSSCASLGWIMLGQQ 378
            +  LS+C   G +  G +
Sbjct: 302 FVIVLSACIHAGLVERGLE 320



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 162/343 (47%), Gaps = 28/343 (8%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG 275
           QQ+     K GL  D  V + LV  +   G      K+F  M + + VS N +M      
Sbjct: 30  QQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASS 89

Query: 276 K-------EVHGYLIRSGLF-------DMVA------------VGNGLVNMYAKCGTIDD 309
           +       +V   ++R GL        +++A            V N L++ YAK G +D 
Sbjct: 90  QTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLEDNVVDNALISCYAKSGDMDS 149

Query: 310 SRSVFRFMIGK-DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
              +F  M  + D++SWN+MISG   NG  +EA+     M   G +    +    L++CA
Sbjct: 150 CEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACA 209

Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
           S+  +  G ++H  G++  L+SDV V +AL+ +Y+  G +    K+F  M + ++ SWNS
Sbjct: 210 SVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNS 269

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
           +I  +A    L  +A++ + +M R+  SP+ VTF+ +L+A     + + G +    +  +
Sbjct: 270 MIYGYA-RHGLGRKAIEIFEEMLRSRESPDHVTFVIVLSACIHAGLVERGLEYFEMMPDH 328

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
            +  +    + ++   G+  ++D  ++   RM    + + W +
Sbjct: 329 GILPQIEHYSCVIDLLGRACKIDKIKEYIQRMPIEPNALIWRT 371



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 124/286 (43%), Gaps = 33/286 (11%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACI--VSGYTHKG 65
           H   +K G   D  + N L+ +Y   G ++   K+F+ M + + VSW  +  V   +   
Sbjct: 33  HCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTP 92

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
           +S E  K+F  M+R G + N+    ++L A                  VL+     D +V
Sbjct: 93  IS-EIVKVFNNMMRGGLIPNKVTFINLLAALSPLS-------------VLE-----DNVV 133

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
            N LI+ Y    +   C        + RD ISWNS+IS Y   G+          M   G
Sbjct: 134 DNALISCYAKSGDMDSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSG 193

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
                +  +    S+I  A +SV +    + ++ A   ++ L SD+ V SALV  +++ G
Sbjct: 194 -----QIMDCCTFSIILNACASVAALERGM-ELHAFGIRSHLESDVVVESALVDMYSKCG 247

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGR------RKGKEVHGYLIRS 285
              YA K+F  M Q+N  S N ++ G       RK  E+   ++RS
Sbjct: 248 RVDYASKLFNSMTQRNEFSWNSMIYGYARHGLGRKAIEIFEEMLRS 293



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV + + L+++Y + G +  ASKLF+ M  RN  SW  ++ GY   G+  +A ++F+EM+
Sbjct: 232 DVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMIYGYARHGLGRKAIEIFEEML 291

Query: 79  RAGFLLNRYALGSVLRACQECG 100
           R+    +      VL AC   G
Sbjct: 292 RSRESPDHVTFVIVLSACIHAG 313


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/658 (36%), Positives = 372/658 (56%), Gaps = 40/658 (6%)

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           S+F  +   + + WNTM  G   N     A+  +  M   GL+ +++S    L SCA   
Sbjct: 20  SIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSK 79

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA------DA-------------------- 405
            ++ GQQIHG  LKLG D D+ V+ +L+S+YA      DA                    
Sbjct: 80  ALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALIT 139

Query: 406 -----GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
                GY++   K+F  +   D VSWN++I  + ++     EA++ Y DM +    P+  
Sbjct: 140 GYASRGYINNARKLFDEISVKDVVSWNAMISGYVET-CNFKEALELYKDMMKTNVKPDES 198

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           T + +++A +     +LG Q+H+ +  +   +   I N L+  Y KCGE++    +F  +
Sbjct: 199 TMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGL 258

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
           + ++D +SWN++I G+ H  L  +A+ L   M++ G+  +  T  +VL ACA +  ++ G
Sbjct: 259 A-KKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIG 317

Query: 581 MEVHAC---GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
             +H      ++       ++ ++L+DMY+KCG I+ A + FD M  R++ SWN+MI G+
Sbjct: 318 RWIHVYINKRLKGVTNASSLL-TSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGF 376

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
           A HG  + A  LFS+M+ +G  PD +TFVG+LSACSH+G++D G   F+SMSQ Y + P+
Sbjct: 377 AMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPK 436

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
           LE + CM+DLLG  G   + +E I  MP+ P+ +IW ++L AC   N    ELG   A  
Sbjct: 437 LEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHN--NVELGESYAQN 494

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           L ++EP+N  +YVLL+N+YA+ G+W+ VAK R  + +  +KK  GCS + +   VH F+ 
Sbjct: 495 LIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFII 554

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-V 876
           GD+ HP    IY  L+E+   M + G+VP T   L ++E E KE  + +HSEK+A+AF +
Sbjct: 555 GDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 614

Query: 877 LTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           ++      + I+KNLRVC +CH A K ISKI  REI+ RD  R H   DG  SC DYW
Sbjct: 615 ISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCHDYW 672



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 233/493 (47%), Gaps = 54/493 (10%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A  IFE I+  +L+ WN++   ++   D+++  KL+  M   G    L PN Y+F  L+ 
Sbjct: 18  AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLG----LLPNSYSFPFLLK 73

Query: 203 --AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
             A   +++ G    QQI   V K G   D+YV ++L+S +A+ G    A K+F++   +
Sbjct: 74  SCAKSKALIEG----QQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHR 129

Query: 261 NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
           +VVS   L+ G                             YA  G I+++R +F  +  K
Sbjct: 130 HVVSYTALITG-----------------------------YASRGYINNARKLFDEISVK 160

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D VSWN MISG  +   ++EA+  +  M +  +     ++++ +S+CA  G I LG+Q+H
Sbjct: 161 DVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLH 220

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
                 G  S++ + N L+ LY+  G +     +F  + + D +SWN++IG       L 
Sbjct: 221 SWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMN-LY 279

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY--NVANETTIEN 498
            EA+  + +M R+G SPN VT +++L A +      +G  +H  + K    V N +++  
Sbjct: 280 KEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLT 339

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
           +L+  Y KCG+++  +++F  M  R    SWN+MI G+  +     A +L   M + G  
Sbjct: 340 SLIDMYAKCGDIEAAKQVFDSMLTRSLS-SWNAMIFGFAMHGKANAAFDLFSKMRKNGID 398

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL------VDMYSKCGRI 612
            D  TF  +LSAC+    L+ G  +        +  D  I   L      +D+   CG  
Sbjct: 399 PDDITFVGLLSACSHSGMLDLGRHIF-----RSMSQDYKITPKLEHYGCMIDLLGHCGLF 453

Query: 613 DYASRFFDLMPVR 625
             A      MP+ 
Sbjct: 454 KEAKEMIRTMPME 466



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 111/478 (23%), Positives = 204/478 (42%), Gaps = 95/478 (19%)

Query: 36  LASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRA 95
           L+ A  +F+ + + N + W  +  G+     S  A K++  M+  G L N Y+   +L++
Sbjct: 15  LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC------------- 142
           C +        G Q+H  VLK     D  V+  LI+MY       D              
Sbjct: 75  CAK--SKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVV 132

Query: 143 -----------------ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
                            AR++F+EI  +D++SWN++IS Y +  +     +L+  M +  
Sbjct: 133 SYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKT- 191

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLL-QQILAMVKKAGLLSDLYVGSALVSGFARL 244
              ++KP+E T  ++++A      SGS  L +Q+ + ++  G  S++ + + L+  +++ 
Sbjct: 192 ---NVKPDESTMVTVVSACAQ---SGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKC 245

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------ 274
           G    A  +F+ + +K+V+S N L+ G                                 
Sbjct: 246 GEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVL 305

Query: 275 -----------GKEVHGYLIR--SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                      G+ +H Y+ +   G+ +  ++   L++MYAKCG I+ ++ VF  M+ + 
Sbjct: 306 PACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRS 365

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
             SWN MI G   +G    A   F  MR++G+   + + +  LS+C+  G + LG+ I  
Sbjct: 366 LSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFR 425

Query: 382 EGLKLGLDSDVSVSNAL------LSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                 +  D  ++  L      + L    G      ++   MP E D V W S++ A
Sbjct: 426 -----SMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKA 478



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 112/207 (54%), Gaps = 11/207 (5%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +  H  I  HGF  ++ + N LI++Y + G++ +A  LF  +  ++ +SW  ++ G+TH
Sbjct: 216 GRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTH 275

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLV---LKSNQT 120
             +  EA  +F+EM+R+G   N   + SVL AC   G      G  +H  +   LK    
Sbjct: 276 MNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLG--AIDIGRWIHVYINKRLKGVTN 333

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
              L+++ LI MY  C +  + A+++F+ + TR L SWN++I  ++  G   + F LFS+
Sbjct: 334 ASSLLTS-LIDMYAKCGD-IEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSK 391

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSS 207
           M++ G    + P++ TF  L++A   S
Sbjct: 392 MRKNG----IDPDDITFVGLLSACSHS 414



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 107/463 (23%), Positives = 205/463 (44%), Gaps = 63/463 (13%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H  +LK G+  D+++  +LI++Y + G L  A K+FD    R+ VS+  +++GY 
Sbjct: 83  EGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYA 142

Query: 63  HKGMSN-------------------------------EACKMFKEMVRAGFLLNRYALGS 91
            +G  N                               EA +++K+M++     +   + +
Sbjct: 143 SRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVT 202

Query: 92  VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE 151
           V+ AC + G    + G Q+H  +       +  + NVLI +Y  C E  + A  +F+ + 
Sbjct: 203 VVSACAQSG--SIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGE-VETACGLFQGLA 259

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA--YSSVL 209
            +D+ISWN++I  ++          LF  M R G      PN+ T  S++ A     ++ 
Sbjct: 260 KKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSG----ESPNDVTMLSVLPACAHLGAID 315

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL- 268
            G ++   I   +K     S L   ++L+  +A+ G+   A+++F+ M+ +++ S N + 
Sbjct: 316 IGRWIHVYINKRLKGVTNASSLL--TSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMI 373

Query: 269 ----MEGRRKGK-EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM-----I 318
               M G+     ++   + ++G+        GL++  +  G +D  R +FR M     I
Sbjct: 374 FGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKI 433

Query: 319 GKDSVSWNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
                 +  MI  L   G ++EA  ++    M  DG++       S L +C     + LG
Sbjct: 434 TPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVI-----WCSLLKACKMHNNVELG 488

Query: 377 QQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLKVFFLM 418
           +      +K  ++ +   S  LLS +YA AG   +  K+  L+
Sbjct: 489 ESYAQNLIK--IEPENPGSYVLLSNIYATAGRWDQVAKIRTLL 529


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/692 (35%), Positives = 383/692 (55%), Gaps = 35/692 (5%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +G +VHG +++ GL + V + N L++ YA+CG +D    VF  M  ++ VSW ++I G  
Sbjct: 149 EGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYA 208

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           +    +EA+  F  M   G+  S+ +++  +S+CA L  + +G+++     +LGL  +  
Sbjct: 209 RGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKV 268

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           + NAL+ +Y   G +    ++F    + + V +N+++  +A  + L  EA+    +M + 
Sbjct: 269 MVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYA-RQGLAREALAILDEMLQQ 327

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G  P+ VT ++ ++A++       G   H  VI+  +    +I N ++  Y KCG+ +  
Sbjct: 328 GPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMA 387

Query: 514 EKIFARMSER------------------------------RDEVSWNSMISGYIHNELLP 543
            ++F  MS +                              R+ V WN+MISG +   L  
Sbjct: 388 CRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFE 447

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
            A+ L   M   G + D  T   + SAC  +   E    VH    +  +  D+ + +ALV
Sbjct: 448 DAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALV 507

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           DM+++CG    A + F+ M  R+V +W + I   A  G+G+ A  LF+QM + G  PD V
Sbjct: 508 DMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVV 567

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
            FV VL+ACSH G V++G  H  S+ + +G+ PQ+E + CMVDLLGRAG L +  + I  
Sbjct: 568 LFVQVLTACSHGGQVEQGL-HIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKS 626

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           MP+ PN ++W ++L AC R + +  E+   AA  + E+ PQ A  +VLL+N+YAS GKW 
Sbjct: 627 MPMEPNDVVWGSLLAAC-RVH-KNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWT 684

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
           DVA+ R  ++E  V+K  G S V +   +H F +GDESHPE   I   L+E+N +  DAG
Sbjct: 685 DVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAG 744

Query: 844 YVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFK 902
           ++P     L D++ + KE L+S HSEK+A+AF L    + +PIR++KNLR+C DCHS  K
Sbjct: 745 HIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAK 804

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             S I  REI++RD+NRFH F  G CSC DYW
Sbjct: 805 MASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/488 (28%), Positives = 234/488 (47%), Gaps = 42/488 (8%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT---IDDSRSVFRFM---IGKDSVSW--NT 327
           K++H  + ++GL  + +    LVN  A+  +   +D +R  F      +  D   +  N+
Sbjct: 42  KQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNS 101

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           +I G    G   EAI+ +  M   G+  ++++    LS C  +     G Q+HG  +K+G
Sbjct: 102 LIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMG 161

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
           L+ DV + N L+  YA+ G++    KVF  M E + VSW S+I  +A  +    EAV  +
Sbjct: 162 LEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDR-PKEAVSLF 220

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
            +M  AG  P+ VT + +++A +      +G +V A + +  +     + NAL+  Y KC
Sbjct: 221 FEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKC 280

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
           G +D  +++F    + R+ V +N+++S Y    L  +A+ ++  M+Q+G R D  T  + 
Sbjct: 281 GAIDAAKRLFDECVD-RNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSA 339

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM----- 622
           +SA A +  L  G   H   +R  LE    IG+ ++DMY KCG+ + A R FDLM     
Sbjct: 340 ISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTV 399

Query: 623 --------------------------PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
                                     P RN   WN+MISG  +    + A+ LF +M+ +
Sbjct: 400 VSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGE 459

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
           G   D VT +G+ SAC + G   E  K   +  +  G+   +   + +VD+  R G+   
Sbjct: 460 GIKADRVTMMGIASACGYLG-APELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQS 518

Query: 717 IEEFINKM 724
             +  NKM
Sbjct: 519 AMQVFNKM 526



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 134/528 (25%), Positives = 241/528 (45%), Gaps = 39/528 (7%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K G   DVF+ N LI+ Y   G +    K+F+ M +RN VSW  ++ GY      
Sbjct: 154 HGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRP 213

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA  +F EMV AG   +   +  V+ AC +        G +V   + +     + ++ N
Sbjct: 214 KEAVSLFFEMVEAGIRPSSVTMVCVISACAKL--RDLDMGERVCAYIGELGLKLNKVMVN 271

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY  C  + D A+R+F+E   R+L+ +N+I+S Y+++G       +   M ++G R
Sbjct: 272 ALVDMYMKC-GAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPR 330

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
               P+  T  S I+A  S+ L   +  +     V + GL     +G+ ++  + + G  
Sbjct: 331 ----PDRVTMLSAISA--SAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKP 384

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
             A ++F+ M  K VVS N L  G                             + + G +
Sbjct: 385 EMACRVFDLMSNKTVVSWNSLTAG-----------------------------FIRNGDV 415

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
           + +  VF  +  +++V WNTMISGL Q   +E+AI  F  M+ +G+ +   +++   S+C
Sbjct: 416 ESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASAC 475

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
             LG   L + +H    K G+  D+ ++ AL+ ++A  G     ++VF  M E D  +W 
Sbjct: 476 GYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWT 535

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           + IG  A  E     A   +  M   G  P+ V F+ +L A S     + G  + + +  
Sbjct: 536 AAIGTMA-MEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMED 594

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           + ++ +      ++   G+ G + +   +   M    ++V W S+++ 
Sbjct: 595 HGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAA 642



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 151/625 (24%), Positives = 256/625 (40%), Gaps = 102/625 (16%)

Query: 109 QVHCLVLKS--NQTFDGLVSNVLIAMYGSCLESTDCARRIFE----EIETRD-LISWNSI 161
           Q+HC + K+  +Q    L   V      +  ES D AR+ FE    ++ + D L   NS+
Sbjct: 43  QLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNSL 102

Query: 162 ISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ----- 216
           I  YS  G       L+ RM   G    + PN YTF          VLSG   +      
Sbjct: 103 IRGYSSAGLGREAILLYVRMLVLG----VTPNHYTF--------PFVLSGCTKIAAFCEG 150

Query: 217 -QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG 275
            Q+   V K GL  D+++ + L+  +A  G+  +  K+FE M ++NVVS   L+ G  +G
Sbjct: 151 IQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARG 210

Query: 276 KEVHGYLIRSGLFDMVAVG----------------------------------------- 294
                 +  S  F+MV  G                                         
Sbjct: 211 DRPKEAV--SLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKV 268

Query: 295 --NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
             N LV+MY KCG ID ++ +F   + ++ V +NT++S   + G   EA+     M + G
Sbjct: 269 MVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQG 328

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
                 +++S +S+ A L  +  G+  HG  ++ GL+   S+ N ++ +Y   G      
Sbjct: 329 PRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMAC 388

Query: 413 KVFFLMPEHDQVSWNSVIGAF---ADSE---------------------------ALVSE 442
           +VF LM     VSWNS+   F    D E                           +L  +
Sbjct: 389 RVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFED 448

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           A++ + +M+  G   + VT + I +A       +L   VH  + K  +  +  +  AL+ 
Sbjct: 449 AIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVD 508

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            + +CG+     ++F +M+E RD  +W + I           A  L   M+ +G + D  
Sbjct: 509 MFARCGDPQSAMQVFNKMTE-RDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVV 567

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
            F  VL+AC+    +E+G+ + +      +   +     +VD+  + G +  A      M
Sbjct: 568 LFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSM 627

Query: 623 PVR-NVYSWNSMISGYARHGHGDKA 646
           P+  N   W S+++    H + + A
Sbjct: 628 PMEPNDVVWGSLLAACRVHKNVEMA 652



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 145/292 (49%), Gaps = 14/292 (4%)

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGE---MDDCEKIFARMSE--RRDEVSW--NSM 532
           Q+H Q+ K  +    +    L++   +      +D   K F    E  R D+  +  NS+
Sbjct: 43  QLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNSL 102

Query: 533 ISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL 592
           I GY    L  +A+ L   M+  G   +H+TF  VLS C  +A    G++VH   V+  L
Sbjct: 103 IRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGL 162

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
           E DV I + L+  Y++CG +D+  + F+ M  RNV SW S+I GYAR     +A++LF +
Sbjct: 163 EEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFE 222

Query: 653 MKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG 712
           M   G  P  VT V V+SAC+    +D G +    + ++ GL       + +VD+  + G
Sbjct: 223 MVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGEL-GLKLNKVMVNALVDMYMKCG 281

Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ 764
            +D  +   ++  +  N +++ T+L     +N  +  L R+A  +L EM  Q
Sbjct: 282 AIDAAKRLFDEC-VDRNLVLYNTIL-----SNYARQGLAREALAILDEMLQQ 327



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/373 (21%), Positives = 152/373 (40%), Gaps = 58/373 (15%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVY-------------------------------VR 32
            K+ H  ++++G      + N +I++Y                               +R
Sbjct: 352 GKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIR 411

Query: 33  VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSV 92
            GD+ SA ++F+++P+RN+V W  ++SG   K +  +A ++F+EM   G   +R  +  +
Sbjct: 412 NGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGI 471

Query: 93  LRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIET 152
             AC   G    +    VH  + K+    D  ++  L+ M+  C +    A ++F ++  
Sbjct: 472 ASACGYLGAP--ELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQS-AMQVFNKMTE 528

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGS 212
           RD+ +W + I   +  G+      LF++M  +G    +KP+   F  ++TA       G 
Sbjct: 529 RDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQG----VKPDVVLFVQVLTACS----HGG 580

Query: 213 YLLQ--QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNVVSMNGLM 269
            + Q   I ++++  G+   +     +V    R G    A  + + M ++ N V    L+
Sbjct: 581 QVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLL 640

Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVGNG-----LVNMYAKCGTIDDSRSV--------FRF 316
              R  K V      +   + +A         L N+YA  G   D   V         R 
Sbjct: 641 AACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRK 700

Query: 317 MIGKDSVSWNTMI 329
           + G  SV  N +I
Sbjct: 701 VPGSSSVQVNGVI 713



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 116/291 (39%), Gaps = 48/291 (16%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  I K+G   D+ L   L++++ R GD  SA ++F++M +R+  +W   +     
Sbjct: 484 AKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAM 543

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           +G    A  +F +M+  G   +      VL AC   G                  Q   G
Sbjct: 544 EGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGG------------------QVEQG 585

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           L    L+  +G           I  +IE      +  ++ +  + G     F L   M  
Sbjct: 586 LHIFSLMEDHG-----------ISPQIE-----HYGCMVDLLGRAGLLREAFDLIKSMPM 629

Query: 184 EGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMV-KKAG---LLSDLYVGSAL 237
           E       PN+  +GSL+ A   + +V   +Y  ++I  +  ++AG   LLS++Y  +  
Sbjct: 630 E-------PNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGK 682

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLF 288
            +  AR+       K   ++   + V +NG++     G E H  +    L 
Sbjct: 683 WTDVARV-RLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALM 732


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/734 (33%), Positives = 386/734 (52%), Gaps = 76/734 (10%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC---GTIDDSRSVFRFMIGKDSVSWNTMIS 330
           + ++ H  ++R  LF    +   L++ YA      T   S ++   +      S++++I 
Sbjct: 18  QARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIH 77

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
              ++  +   +  F  +    L+   F L S + SCASL  +  GQQ+H      G  +
Sbjct: 78  AFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLT 137

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           D  V+++L  +Y     +    K+F  MP+ D V W+++I  ++    LV EA + + +M
Sbjct: 138 DSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYS-RLGLVEEAKELFGEM 196

Query: 451 RRAGWSPNGVTFINILA----------AASSFSMG------------------------- 475
           R  G  PN V++  +LA          A   F M                          
Sbjct: 197 RSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDV 256

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER------------ 523
            +G QVH  VIK  + ++  + +A+L  YGKCG + +  ++F  + E             
Sbjct: 257 VVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGL 316

Query: 524 ----------------RDE------VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
                           +D+      V+W S+I+    N    +A+ L   M   G   + 
Sbjct: 317 SRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNA 376

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
            T  +++ AC +++ L  G E+H   +R  +  DV +GSAL+DMY+KCGRI  A R FD 
Sbjct: 377 VTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDK 436

Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           M   N+ SWN+++ GYA HG   + + +F  M   G  PD VTF  VLSAC+  GL +EG
Sbjct: 437 MSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEG 496

Query: 682 FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACC 741
           ++ + SMS+ +G+ P++E ++C+V LL R G+L++    I +MP  P++ +W  +L +C 
Sbjct: 497 WRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCR 556

Query: 742 RANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA 801
             N     LG  AA  LF +EP N  NY+LL+N+YAS G W++  + R+ MK   ++K  
Sbjct: 557 VHN--NLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNP 614

Query: 802 GCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKE 861
           G SW+ +   VH+ +AGD+SHP+   I EKL +LN +M+ +GY+P+T F L D+E + KE
Sbjct: 615 GYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVLQDVEEQDKE 674

Query: 862 DLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRF 920
            ++  HSEK+AV   L   S   P++++KNLR+C DCH+  K IS++ GREI +RD+NRF
Sbjct: 675 QILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIYVRDTNRF 734

Query: 921 HHFNDGKCSCGDYW 934
           HHF DG CSCGD+W
Sbjct: 735 HHFKDGVCSCGDFW 748



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 139/591 (23%), Positives = 253/591 (42%), Gaps = 80/591 (13%)

Query: 93  LRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE--STDCARRIFEEI 150
           L  C     +      Q H L+L+ N   D  ++  L++ Y + L   +   +  +   +
Sbjct: 5   LSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHL 64

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLS 210
               L S++S+I  +++      V   FS +        L P+ +   S I +  S  L 
Sbjct: 65  PHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHP----LRLIPDAFLLPSAIKSCAS--LR 118

Query: 211 GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
                QQ+ A    +G L+D  V S+L   + +      ARK+F++M  ++VV  + ++ 
Sbjct: 119 ALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIA 178

Query: 271 GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM----IGKDSVSWN 326
           G                             Y++ G +++++ +F  M    +  + VSWN
Sbjct: 179 G-----------------------------YSRLGLVEEAKELFGEMRSGGVEPNLVSWN 209

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            M++G   NG Y+EA+  F  M   G      ++   L +   L  +++G Q+HG  +K 
Sbjct: 210 GMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQ 269

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE-------------------------- 420
           GL SD  V +A+L +Y   G +    +VF  + E                          
Sbjct: 270 GLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVF 329

Query: 421 ---HDQ------VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
               DQ      V+W S+I + + +   + EA++ + DM+  G  PN VT  +++ A  +
Sbjct: 330 NKFKDQKMELNVVTWTSIIASCSQNGKDL-EALELFRDMQAYGVEPNAVTIPSLIPACGN 388

Query: 472 FSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
            S    G ++H   ++  + ++  + +AL+  Y KCG +    + F +MS   + VSWN+
Sbjct: 389 ISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSA-LNLVSWNA 447

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH-ACGVRA 590
           ++ GY  +    + M +   M+Q GQ+ D  TF  VLSACA     E G   + +     
Sbjct: 448 VMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEH 507

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARH 640
            +E  +   + LV + S+ G+++ A      MP   +   W +++S    H
Sbjct: 508 GIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVH 558



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 126/588 (21%), Positives = 242/588 (41%), Gaps = 95/588 (16%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASAS---KLFDEMPDRNSVSWACIVSG 60
           A+  H  IL+     D  L  +L++ Y     L++      L   +P     S++ ++  
Sbjct: 19  ARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIHA 78

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           +            F  +     + + + L S +++C          G Q+H     S   
Sbjct: 79  FARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASL--RALDPGQQLHAFAAASGFL 136

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D +V++ L  MY  C    D AR++F+ +  RD++ W+++I+ YS+ G      +LF  
Sbjct: 137 TDSIVASSLTHMYLKCDRILD-ARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGE 195

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M                                         +  G+  +L   + +++G
Sbjct: 196 M-----------------------------------------RSGGVEPNLVSWNGMLAG 214

Query: 241 FARLGNFYYARKIFEQMIQKN----------VVSMNGLMEGRRKGKEVHGYLIRSGLFDM 290
           F   G +  A  +F  M+ +           V+   G +E    G +VHGY+I+ GL   
Sbjct: 215 FGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSD 274

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVF------------RFMIG-----------------KD 321
             V + +++MY KCG + +   VF             F+ G                 KD
Sbjct: 275 KFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKD 334

Query: 322 S------VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
                  V+W ++I+   QNG   EA+  F  M+  G+  +  ++ S + +C ++  +M 
Sbjct: 335 QKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMH 394

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G++IH   L+ G+  DV V +AL+ +YA  G +    + F  M   + VSWN+V+  +A 
Sbjct: 395 GKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYA- 453

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANET 494
                 E ++ +  M ++G  P+ VTF  +L+A +   + + G + +  +  ++ +  + 
Sbjct: 454 MHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKM 513

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
                L++   + G++++   I   M    D   W +++S   +HN L
Sbjct: 514 EHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNL 561


>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 690

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 227/600 (37%), Positives = 355/600 (59%), Gaps = 8/600 (1%)

Query: 338 YEEAIMNF--CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           Y EA+  F    +  DG      +  + +S+C  L  I   +++    +  G + D+ V 
Sbjct: 96  YREAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVM 155

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           N +L ++   G +    K+F  MPE D  SW ++IG F DS    SEA   +L M     
Sbjct: 156 NRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNF-SEAFGLFLCMWEEFN 214

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
                TF  ++ A++   + ++G Q+H+  +K  V ++T +  AL+  Y KCG ++D   
Sbjct: 215 DGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHC 274

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F +M E+   V WNS+I+ Y  +    +A++  + M   G ++DHFT + V+  CA +A
Sbjct: 275 VFDQMPEK-TTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLA 333

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
           +LE   + HA  VR   + D+V  +ALVD YSK GR++ A   F+ M  +NV SWN++I+
Sbjct: 334 SLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIA 393

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
           GY  HG G++A+ +F QM  +G +P+HVTF+ VLSACS++GL + G++ F SMS+ + + 
Sbjct: 394 GYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVK 453

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           P+   ++CMV+LLGR G LD+  E I   P  P + +W T+L A CR +    ELG+ AA
Sbjct: 454 PRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTA-CRMH-ENLELGKLAA 511

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
             L+ MEP+   NY++L N+Y S GK ++ A   + +K   ++    C+W+ +K   + F
Sbjct: 512 ENLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAF 571

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
           + GD+SH +   IYEK+  +  ++   GYV + K  L D++ E ++ ++ YHSEK+A+AF
Sbjct: 572 LCGDKSHSQTKEIYEKVNNMMVEISRHGYVEENKALLPDVD-EEEQRILKYHSEKLAIAF 630

Query: 876 VLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            L       P++I +  RVCGDCHSA KFI+ + GREIV+RD++RFHHF DG CSCGDYW
Sbjct: 631 GLINTPHWTPLQITQGHRVCGDCHSAIKFIAMVTGREIVVRDASRFHHFRDGSCSCGDYW 690



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 183/376 (48%), Gaps = 16/376 (4%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R  K V  Y++ SG    + V N ++ ++ KCG + D+R +F  M  KD  SW TMI G 
Sbjct: 134 RGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGF 193

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
             +G + EA   F  M  +     + +  + + + A LG + +G+QIH   LK G+  D 
Sbjct: 194 VDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDT 253

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            VS AL+ +Y+  G +     VF  MPE   V WNS+I ++A       EA+ +Y +MR 
Sbjct: 254 FVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYA-LHGYSEEALSFYYEMRD 312

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           +G   +  T   ++   +  +  +   Q HA +++     +     AL+  Y K G M+D
Sbjct: 313 SGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMED 372

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
              +F RM  R++ +SWN++I+GY ++    +A+ +   M++ G   +H TF  VLSAC+
Sbjct: 373 AWHVFNRM-RRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACS 431

Query: 573 SVATLERGMEV-------HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
                ERG E+       H    RA      +  + +V++  + G +D A       P +
Sbjct: 432 YSGLSERGWEIFYSMSRDHKVKPRA------MHYACMVELLGREGLLDEAYELIRSAPFK 485

Query: 626 NVYS-WNSMISGYARH 640
              + W ++++    H
Sbjct: 486 PTTNMWATLLTACRMH 501



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 175/382 (45%), Gaps = 45/382 (11%)

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
           T+ +L++A     L     ++++   +  +G   DLYV + ++    + G    ARK+F+
Sbjct: 119 TYDALVSACVG--LRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFD 176

Query: 256 QMIQKNVVSMNGLM------------------------EGRRK----------------- 274
           +M +K++ S   ++                        +GR +                 
Sbjct: 177 EMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQV 236

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+++H   ++ G+ D   V   L++MY+KCG+I+D+  VF  M  K +V WN++I+    
Sbjct: 237 GRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYAL 296

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +G  EEA+  +  MR  G    +F++   +  CA L  +   +Q H   ++ G D+D+  
Sbjct: 297 HGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVA 356

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           + AL+  Y+  G +     VF  M   + +SWN++I  + +      EAV+ +  M R G
Sbjct: 357 NTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGN-HGQGEEAVEMFEQMLREG 415

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA-LLSCYGKCGEMDDC 513
             PN VTF+ +L+A S   + + G ++   + + +      +  A ++   G+ G +D+ 
Sbjct: 416 MIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEA 475

Query: 514 EKIFARMSERRDEVSWNSMISG 535
            ++      +     W ++++ 
Sbjct: 476 YELIRSAPFKPTTNMWATLLTA 497



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 130/263 (49%), Gaps = 13/263 (4%)

Query: 11  ILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEA 70
           ++  GF  D+++ N ++ V+V+ G +  A KLFDEMP+++  SW  ++ G+   G  +EA
Sbjct: 143 MVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEA 202

Query: 71  CKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLI 130
             +F  M             +++RA    G    + G Q+H   LK     D  VS  LI
Sbjct: 203 FGLFLCMWEEFNDGRSRTFTTMIRA--SAGLGLVQVGRQIHSCALKRGVGDDTFVSCALI 260

Query: 131 AMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRY 188
            MY  C  +E   C   +F+++  +  + WNSII+ Y+  G +      +  M+  G   
Sbjct: 261 DMYSKCGSIEDAHC---VFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSG--- 314

Query: 189 SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
             K + +T  S++    + + S  Y  Q   A+V++ G  +D+   +ALV  +++ G   
Sbjct: 315 -AKIDHFTI-SIVIRICARLASLEYAKQAHAALVRR-GYDTDIVANTALVDFYSKWGRME 371

Query: 249 YARKIFEQMIQKNVVSMNGLMEG 271
            A  +F +M +KNV+S N L+ G
Sbjct: 372 DAWHVFNRMRRKNVISWNALIAG 394



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 7/207 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +  H   LK G   D F+   LI++Y + G +  A  +FD+MP++ +V W  I++ Y  
Sbjct: 237 GRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYAL 296

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G S EA   + EM  +G  ++ + +  V+R C     +  ++  Q H  +++     D 
Sbjct: 297 HGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARL--ASLEYAKQAHAALVRRGYDTDI 354

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           + +  L+  Y       D A  +F  +  +++ISWN++I+ Y   G      ++F +M R
Sbjct: 355 VANTALVDFYSKWGRMED-AWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLR 413

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLS 210
           EG    + PN  TF ++++A   S LS
Sbjct: 414 EG----MIPNHVTFLAVLSACSYSGLS 436


>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/581 (40%), Positives = 344/581 (59%), Gaps = 17/581 (2%)

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA------LLSLYADAGYLSRCLKV 414
           IS L  CAS    +  +QIH   ++ G    VS++N       + ++ + +  +S    V
Sbjct: 21  ISLLQFCASSKHKL--KQIHAFSIRHG----VSLNNPDMGKHLIFTIVSLSAPMSYAYNV 74

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F ++   +  +WN++I  +A+S+   S A  +Y  M  +   P+  T+  +L A S    
Sbjct: 75  FTVIHNPNVFTWNTIIRGYAESDN-PSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLN 133

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            + G  +H+  I+    +   ++N+LL  Y  CG+ +   K+F  M ER D V+WNSMI+
Sbjct: 134 VREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKER-DLVAWNSMIN 192

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           G+  N    +A+ L   M   G   D FT  ++LSA A +  LE G  VH   ++  L  
Sbjct: 193 GFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSK 252

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           +  + ++L+D+Y+KCG I  A R F  M  RN  SW S+I G A +G G++AL LF +M+
Sbjct: 253 NSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEME 312

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
             G +P  +TFVGVL ACSH G++DEGF++F+ M +  G+IP++E + CMVDLL RAG +
Sbjct: 313 GQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLV 372

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
            +  E+I  MP+ PN++IWRT+LGAC         LG  A + L  +EP+++ +YVLL+N
Sbjct: 373 KQAYEYIQNMPVQPNAVIWRTLLGACTIHG--HLGLGEIARSHLLNLEPKHSGDYVLLSN 430

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           +YAS  +W DV   R++M +  VKK  G S V + + V+ F  GD SHP+   +Y  L++
Sbjct: 431 LYASERRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEK 490

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRV 893
           + + ++  GYVP T   L D+E E KE  +SYHSEK+A+AF+L       PIR+MKNLRV
Sbjct: 491 ITELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRV 550

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           C DCH A K I+KI  REIV+RD +RFHHF  G CSC DYW
Sbjct: 551 CADCHMAIKLIAKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 137/256 (53%), Gaps = 11/256 (4%)

Query: 229 SDLYVGSALVSGFARLGN----FYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEV 278
            +++  + ++ G+A   N    F + R++    ++ +  +   L++        R+G+ +
Sbjct: 81  PNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAI 140

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H   IR+G   +V V N L+++YA CG  + +  VF  M  +D V+WN+MI+G   NG  
Sbjct: 141 HSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRP 200

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
            EA+  F  M  +G+    F+++S LS+ A LG + LG+++H   LK+GL  +  V+N+L
Sbjct: 201 NEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSL 260

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           L LYA  G +    +VF  M E + VSW S+I   A       EA++ + +M   G  P+
Sbjct: 261 LDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLA-VNGFGEEALELFKEMEGQGLVPS 319

Query: 459 GVTFINILAAASSFSM 474
            +TF+ +L A S   M
Sbjct: 320 EITFVGVLYACSHCGM 335



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 163/333 (48%), Gaps = 25/333 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H   +++GF   VF+ N+L+++Y   GD  SA K+F+ M +R+ V+W  +++G+
Sbjct: 135 REGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGF 194

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G  NEA  +F+EM   G   + + + S+L A  E G    + G +VH  +LK   + 
Sbjct: 195 ALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELG--ALELGRRVHVYLLKVGLSK 252

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V+N L+ +Y  C    + A+R+F E+  R+ +SW S+I   +  G      +LF  M
Sbjct: 253 NSHVTNSLLDLYAKCGAIRE-AQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEM 311

Query: 182 QREGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           + +G    L P+E TF G L   ++  +L   +  +    M ++ G++  +     +V  
Sbjct: 312 EGQG----LVPSEITFVGVLYACSHCGMLDEGF--EYFRRMKEECGIIPRIEHYGCMVDL 365

Query: 241 FARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVHGYL-----IRSGLFDMVAVG 294
            +R G    A +  + M +Q N V    L+        +HG+L      RS L ++    
Sbjct: 366 LSRAGLVKQAYEYIQNMPVQPNAVIWRTLL----GACTIHGHLGLGEIARSHLLNLEPKH 421

Query: 295 NG----LVNMYAKCGTIDDSRSVFRFMIGKDSV 323
           +G    L N+YA      D + + R M+ KD V
Sbjct: 422 SGDYVLLSNLYASERRWSDVQVIRRSML-KDGV 453



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 167/382 (43%), Gaps = 55/382 (14%)

Query: 97  QECGPSGFKFGMQVHCLVLKSNQTFDGL-VSNVLIAMYGSCLESTDCARRIFEEIETRDL 155
           Q C  S  K   Q+H   ++   + +   +   LI    S       A  +F  I   ++
Sbjct: 25  QFCASSKHKLK-QIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNV 83

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS--VLSGSY 213
            +WN+II  Y++  +    F  + +M        ++P+ +T+  L+ A   S  V  G  
Sbjct: 84  FTWNTIIRGYAESDNPSPAFLFYRQMVVS----CVEPDTHTYPFLLKAISKSLNVREG-- 137

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-- 271
             + I ++  + G  S ++V ++L+  +A  G+   A K+FE M ++++V+ N ++ G  
Sbjct: 138 --EAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFA 195

Query: 272 ---------------------------------------RRKGKEVHGYLIRSGLFDMVA 292
                                                     G+ VH YL++ GL     
Sbjct: 196 LNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSH 255

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           V N L+++YAKCG I +++ VF  M  +++VSW ++I GL  NG  EEA+  F  M   G
Sbjct: 256 VTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQG 315

Query: 353 LMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           L+ S  + +  L +C+  G +  G +       + G+   +     ++ L + AG + + 
Sbjct: 316 LVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQA 375

Query: 412 LKVFFLMP-EHDQVSWNSVIGA 432
            +    MP + + V W +++GA
Sbjct: 376 YEYIQNMPVQPNAVIWRTLLGA 397



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 140/290 (48%), Gaps = 15/290 (5%)

Query: 34  GDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVL 93
             ++ A  +F  + + N  +W  I+ GY      + A   +++MV +    + +    +L
Sbjct: 66  APMSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLL 125

Query: 94  RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
           +A  +      + G  +H + +++       V N L+ +Y +C + T+ A ++FE ++ R
Sbjct: 126 KAISKS--LNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGD-TESAYKVFELMKER 182

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY 213
           DL++WNS+I+ ++  G       LF  M  EG    ++P+ +T  SL++A  S+ L    
Sbjct: 183 DLVAWNSMINGFALNGRPNEALTLFREMSVEG----VEPDGFTVVSLLSA--SAELGALE 236

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR- 272
           L +++   + K GL  + +V ++L+  +A+ G    A+++F +M ++N VS   L+ G  
Sbjct: 237 LGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLA 296

Query: 273 -----RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                 +  E+   +   GL        G++   + CG +D+    FR M
Sbjct: 297 VNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRM 346


>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/669 (35%), Positives = 360/669 (53%), Gaps = 57/669 (8%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT-----IDDSRSVFRFMIGKDSVSWNTMIS 330
           K+ H  ++R+G      +   LV  YA   T      + S  VF F+   +   WN MI 
Sbjct: 51  KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 110

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
              +N    +AI+ +  M       + ++  + L +C+  G +  G Q+H   +K GL  
Sbjct: 111 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGG 170

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           D  + ++ + +YA  G L    ++      E D V WN++I  +                
Sbjct: 171 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGY---------------- 214

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE--NALLSCYGKC 507
                     + F  + AA   F                 + + + I   NA++S + +C
Sbjct: 215 ----------LRFGEVEAARELFE---------------GMPDRSMISTWNAMISGFSRC 249

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
           G ++   + F  M ER DE+SW++MI GYI      +A+ +   M +   R   F   +V
Sbjct: 250 GMVEVAREFFDEMKER-DEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSV 308

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           LSACA++  L++G  +H    R  ++ D V+G++LVDMY+KCGRID A   F+ M  + V
Sbjct: 309 LSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEV 368

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            SWN+MI G A HG  + A+ LFS+M ++   P+ +TFVGVL+AC+H GLV +G   F S
Sbjct: 369 SSWNAMIGGLAMHGRAEDAIDLFSKMDIN---PNEITFVGVLNACAHGGLVQKGLTIFNS 425

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           M + YG+ PQ+E + C+VDLLGRAG L + E+ ++ +P  P   +W  +LGAC +     
Sbjct: 426 MRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHG--N 483

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
            ELG +   +L E+EPQN+  Y LL+N+YA  G+WE+V + RK MKE  +K   G S + 
Sbjct: 484 VELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIID 543

Query: 808 MKDG-VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSY 866
           +  G VH F+ GD SHP+   IY+ L ++ ++++  GY P     LFD++ E KE  V  
Sbjct: 544 LGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQ 603

Query: 867 HSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFND 925
           HSEK+A+ F L   S    IRI+KNLRVC DCHSA K IS++  REI++RD  R+HHF +
Sbjct: 604 HSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRN 663

Query: 926 GKCSCGDYW 934
           G CSC D+W
Sbjct: 664 GACSCKDFW 672



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 208/434 (47%), Gaps = 19/434 (4%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLE----STDCARRIFEEIETRDLISWNSIISV 164
           Q H L+L++    D  ++  L+  Y +       S + + R+F+ +   ++  WN +I V
Sbjct: 52  QAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKV 111

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
             +  +      L+  M    FR    PN+YT+ +++ A   + +    +  Q+ A + K
Sbjct: 112 CIENNEPFKAILLYYEMMVAHFR----PNKYTYPAVLKACSDAGVVAEGV--QVHAHLVK 165

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFE-QMIQKNVVSMNGLMEGRRKGKEVHGYL- 282
            GL  D ++ S+ +  +A  G    AR+I + +  + + V  N +++G  +  EV     
Sbjct: 166 HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARE 225

Query: 283 IRSGLFD--MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
           +  G+ D  M++  N +++ +++CG ++ +R  F  M  +D +SW+ MI G  Q GC+ E
Sbjct: 226 LFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFME 285

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A+  F  M+++ +    F L S LS+CA+LG +  G+ IH    +  +  D  +  +L+ 
Sbjct: 286 ALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVD 345

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +YA  G +    +VF  M   +  SWN++IG  A       +A+  +  M     +PN +
Sbjct: 346 MYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLA-MHGRAEDAIDLFSKM---DINPNEI 401

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           TF+ +L A +   + + G  +   + K Y V  +      ++   G+ G + + EK+ + 
Sbjct: 402 TFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSS 461

Query: 520 MSERRDEVSWNSMI 533
           +        W +++
Sbjct: 462 IPTEPTPAVWGALL 475



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 206/452 (45%), Gaps = 49/452 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVG-----DLASASKLFDEMPDRNSVSWACIVS 59
           K  H  IL+ G   D ++  +L+  Y  V         S+ ++FD +   N   W C++ 
Sbjct: 51  KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 110

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
                    +A  ++ EM+ A F  N+Y   +VL+AC + G      G+QVH  ++K   
Sbjct: 111 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGV--VAEGVQVHAHLVKHGL 168

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR-DLISWNSIISVYSQRGDTISVFKLF 178
             DG + +  I MY S     + ARRI ++     D + WN++I  Y + G+  +  +LF
Sbjct: 169 GGDGHILSSAIRMYASFGRLVE-ARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELF 227

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG------SYLLQQILAMVKKAGLLSDLY 232
             M          P+     S+I+  +++++SG        + ++    +K+   +S   
Sbjct: 228 EGM----------PDR----SMIS-TWNAMISGFSRCGMVEVAREFFDEMKERDEIS--- 269

Query: 233 VGSALVSGFARLGNFYYARKIFEQM----------IQKNVVSMNGLMEGRRKGKEVHGYL 282
             SA++ G+ + G F  A +IF QM          +  +V+S    +    +G+ +H Y 
Sbjct: 270 -WSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYA 328

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
            R+ +     +G  LV+MYAKCG ID +  VF  M  K+  SWN MI GL  +G  E+AI
Sbjct: 329 KRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAI 388

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSL 401
             F  M    +  +  + +  L++CA  G +  G  I     K  G++  +     ++ L
Sbjct: 389 DLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDL 445

Query: 402 YADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
              AG L+   KV   +P E     W +++GA
Sbjct: 446 LGRAGLLTEAEKVVSSIPTEPTPAVWGALLGA 477



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 138/301 (45%), Gaps = 19/301 (6%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N +I+ + R G +  A + FDEM +R+ +SW+ ++ GY  +G   EA ++F +M +    
Sbjct: 240 NAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIR 299

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
             ++ L SVL AC   G      G  +H    +++   DG++   L+ MY  C    D A
Sbjct: 300 PRKFVLPSVLSACANLG--ALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKC-GRIDLA 356

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF-GSLIT 202
             +FE++  +++ SWN++I   +  G       LFS+M        + PNE TF G L  
Sbjct: 357 WEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM-------DINPNEITFVGVLNA 409

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
            A+  ++     L    +M K+ G+   +     +V    R G    A K+   +  +  
Sbjct: 410 CAHGGLVQKG--LTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPT 467

Query: 263 VSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFRF 316
            ++ G + G  R+ G    G  +   L ++    +G    L N+YAK G  ++   V + 
Sbjct: 468 PAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKL 527

Query: 317 M 317
           M
Sbjct: 528 M 528



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 117/299 (39%), Gaps = 48/299 (16%)

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
           Y H+ L+P   +          +L H     +L+   +  +L    + HA  +R     D
Sbjct: 13  YHHHHLIPNGHS------TETSKLSHKAILHLLNTQCTT-SLHHLKQAHALILRTGHLQD 65

Query: 596 VVIGSALVDMYSKCGRIDYAS-----RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
             I  +LV  Y+      Y S     R FD +   NV+ WN MI     +    KA+ L+
Sbjct: 66  SYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLY 125

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF-------KH--------FKSMSQVYGLI 695
            +M +    P+  T+  VL ACS AG+V EG        KH          S  ++Y   
Sbjct: 126 YEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASF 185

Query: 696 PQLEQ----------------FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
            +L +                ++ M+D   R GE++   E    MP       W  ++  
Sbjct: 186 GRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISG 245

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVK 798
             R  C   E+ R+      EM+ ++ +++  + + Y   G + +  +    M++ +++
Sbjct: 246 FSR--CGMVEVARE---FFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIR 299


>gi|225436291|ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 906

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 292/956 (30%), Positives = 479/956 (50%), Gaps = 100/956 (10%)

Query: 29  VYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV--RAGFLL-- 84
           +YV  G +  A KLFDEMP+R+ VSW  ++SGY   G ++E   MF +M+    G LL  
Sbjct: 1   MYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLLRP 60

Query: 85  NRYALGSVLRACQ--ECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC 142
           + +    VLRAC   EC      +G  VH LV+K +   D  V N L++MYGSC    D 
Sbjct: 61  DSFVFAVVLRACGMVEC----LSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDA 116

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A  +F  I+  DL+ W+SI+S Y + G      ++F  M   G    ++P+ + F S++ 
Sbjct: 117 AV-VFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGG----IEPDAFAF-SMVL 170

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
            A +++    +  Q    ++K  G  S LY+ ++L+  +A+ G+    R++F  M +KN+
Sbjct: 171 GACTNLECWDFGTQAHCYIIK-MGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNL 229

Query: 263 VSMNGLMEGR-----------------------------------------RKGKEVHGY 281
           VS N  + G                                            GKE+HGY
Sbjct: 230 VSWNTFINGYVHNFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGY 289

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           ++R+G+     V + L++MY  C  ID      R  +    +++        + G Y+E 
Sbjct: 290 ILRAGIETNRYVVSSLLDMYIGC--IDHESLYPRVEVPLKLLNYL-------EGGGYDEF 340

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           IM                  S L  C+    +  G+  H   +KL L SD  V ++L+ +
Sbjct: 341 IMT-----------------SLLKWCSLESSLESGKMFHSLIIKLDLKSDSYVLSSLIDM 383

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y+  G      +VF  + + D   W+++I   +      +EA+K +  M+  G   N  T
Sbjct: 384 YSKCGIWEAAKRVFTRVEQPDTAPWSALISGHS-WNGCFAEALKLFRKMQFDGIKANEFT 442

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           F +++ A  +    + G ++H ++++    +  ++ N L++ Y +  +     K+ + + 
Sbjct: 443 FTSVILACLALENLRKGKELHCKILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIP 502

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
           +   E+SWN +I   +  E       L+W +      LD  +   + ++C+S   L  G 
Sbjct: 503 D--SEISWNFLIRACLGAEDYEIIHKLLWRIQVSHGNLDPVSACDIFASCSSPVLLNVGT 560

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           + HA   +  L     I ++L+ MYS CG+ D A + F+LMP ++  SW S++S    HG
Sbjct: 561 QAHAYMTKRGLISHPTISNSLIQMYSACGKFDEAVQAFNLMPEKDTCSWTSILSARVEHG 620

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
           H  +AL L SQM+      D  TF  VL+AC+  GLVDE F+ F SM +VYG+ P  E +
Sbjct: 621 HPSEALNLISQMRWKNKPADQSTFRSVLNACAQMGLVDEAFRLFFSMKEVYGIEPLEEHY 680

Query: 702 SCMVDLLGRAGELDKIEEFINKMP-ITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLF 759
           SCMV++LGRAG  +++ +FIN +P      LIWRT+L +     N +   + + AA  L 
Sbjct: 681 SCMVEVLGRAGMFEEVLDFINGVPTFKLGPLIWRTLLSSSRIHGNMK---VAQYAAEKLL 737

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           E+EP +    +LL  +  + G+W++  K +   K       A  SW+ +++ ++ F A D
Sbjct: 738 ELEPSDFSANLLLEQVLLTLGEWDNALKLKTKTKSM----RASSSWIEIRNRIYEF-ASD 792

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLT 878
           E+ P K+ +  KL E+  KM + GYV      L + E E  + +  +H+E  A+AF +++
Sbjct: 793 EN-PAKE-VSAKLAEIEGKMEELGYVADKNHLLHNAEEEEYDGVGLHHTEMKALAFGLIS 850

Query: 879 RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
               +P+R++KN+R+CGDCHSA KF+S  + RE+V++D   FHHF DGKCSC D W
Sbjct: 851 LPHGMPVRVVKNVRMCGDCHSACKFMSTFLERELVVKDPYSFHHFRDGKCSCRDTW 906



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 171/663 (25%), Positives = 322/663 (48%), Gaps = 50/663 (7%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K     D F+ N L+++Y   G L  A+ +F  +   + V W+ I+SGY   G+ 
Sbjct: 85  HGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVFGGIDKPDLVGWSSILSGYVKNGLE 144

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQ--ECGPSGFKFGMQVHCLVLKSNQTFDG-- 123
            E  ++F +MV  G   + +A   VL AC   EC    + FG Q HC ++K    FD   
Sbjct: 145 EEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLEC----WDFGTQAHCYIIK--MGFDSCL 198

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            + N L+  Y  C +  +  RR+F  +  ++L+SWN+ I+ Y      +   ++F  +  
Sbjct: 199 YLENSLMDFYAKCGD-LEGMRRVFSHMSEKNLVSWNTFINGYVHNFHYLEALRIFQILME 257

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA- 242
           E      + ++++  S++ A   S L      ++I   + +AG+ ++ YV S+L+  +  
Sbjct: 258 E----VSQCDDFSLLSILKAV--SGLGHLDHGKEIHGYILRAGIETNRYVVSSLLDMYIG 311

Query: 243 ---------------RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGL 287
                          +L N Y     +++ I  +++    L      GK  H  +I+  L
Sbjct: 312 CIDHESLYPRVEVPLKLLN-YLEGGGYDEFIMTSLLKWCSLESSLESGKMFHSLIIKLDL 370

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
                V + L++MY+KCG  + ++ VF  +   D+  W+ +ISG   NGC+ EA+  F  
Sbjct: 371 KSDSYVLSSLIDMYSKCGIWEAAKRVFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRK 430

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M+ DG+ ++ F+  S + +C +L  +  G+++H + L+ G +S+ SV N L++LY++   
Sbjct: 431 MQFDGIKANEFTFTSVILACLALENLRKGKELHCKILRSGYESNFSVVNTLINLYSELWQ 490

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL-VSEAVKYYLDMRRAGWSPNGVTFINIL 466
             + LK+  ++P+  ++SWN +I A   +E   +   + + + +      P  V+  +I 
Sbjct: 491 HKQALKLCSMIPD-SEISWNFLIRACLGAEDYEIIHKLLWRIQVSHGNLDP--VSACDIF 547

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           A+ SS  +  +G Q HA + K  + +  TI N+L+  Y  CG+ D+  + F  M E +D 
Sbjct: 548 ASCSSPVLLNVGTQAHAYMTKRGLISHPTISNSLIQMYSACGKFDEAVQAFNLMPE-KDT 606

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV--- 583
            SW S++S  + +    +A+NL+  M  + +  D  TF +VL+ACA +  ++    +   
Sbjct: 607 CSWTSILSARVEHGHPSEALNLISQMRWKNKPADQSTFRSVLNACAQMGLVDEAFRLFFS 666

Query: 584 --HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS--WNSMISGYAR 639
                G+    E      S +V++  + G  +    F + +P   +    W +++S    
Sbjct: 667 MKEVYGIEPLEEH----YSCMVEVLGRAGMFEEVLDFINGVPTFKLGPLIWRTLLSSSRI 722

Query: 640 HGH 642
           HG+
Sbjct: 723 HGN 725



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 160/356 (44%), Gaps = 29/356 (8%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K+FH  I+K     D ++ ++LI++Y + G   +A ++F  +   ++  W+ ++SG+
Sbjct: 356 ESGKMFHSLIIKLDLKSDSYVLSSLIDMYSKCGIWEAAKRVFTRVEQPDTAPWSALISGH 415

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G   EA K+F++M   G   N +   SV+ AC        + G ++HC +L+S    
Sbjct: 416 SWNGCFAEALKLFRKMQFDGIKANEFTFTSVILAC--LALENLRKGKELHCKILRSGYES 473

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V N LI +Y    +    A ++   I   + ISWN +I       D   + KL  R+
Sbjct: 474 NFSVVNTLINLYSELWQHKQ-ALKLCSMIPDSE-ISWNFLIRACLGAEDYEIIHKLLWRI 531

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           Q      +L P   +   +  +  S VL    +  Q  A + K GL+S   + ++L+  +
Sbjct: 532 QVS--HGNLDP--VSACDIFASCSSPVLLN--VGTQAHAYMTKRGLISHPTISNSLIQMY 585

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS-GLFDMVAVGN----- 295
           +  G F  A + F  M +K+  S   ++  R +    HG+   +  L   +   N     
Sbjct: 586 SACGKFDEAVQAFNLMPEKDTCSWTSILSARVE----HGHPSEALNLISQMRWKNKPADQ 641

Query: 296 ----GLVNMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEAI 342
                ++N  A+ G +D++  +F  M     I      ++ M+  L + G +EE +
Sbjct: 642 STFRSVLNACAQMGLVDEAFRLFFSMKEVYGIEPLEEHYSCMVEVLGRAGMFEEVL 697


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 255/719 (35%), Positives = 381/719 (52%), Gaps = 85/719 (11%)

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFMIG--KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
              LV  YA  G +  + S F  +    +D+V  N +IS   +      A+  F ++   
Sbjct: 91  ATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLAS 150

Query: 352 G-LMSSNFSLISTLSSCASLGWIMLGQ--QIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           G L   ++S  + LS+   L  I +    Q+    LK G    +SVSNAL++LY     L
Sbjct: 151 GSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEAL 210

Query: 409 SR---CLKVFFLMPEHD-------------------------------QVSWNSVIGAFA 434
                  KV   MP+ D                                V WN++I  + 
Sbjct: 211 EATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYV 270

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV--IKYNVAN 492
            S  +V EA + +  M       +  TF ++L+A ++      G  VH Q+  ++ N   
Sbjct: 271 HS-GMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVP 329

Query: 493 ETT--IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN--- 547
           E    + NAL++ Y KCG +    +IF  M + +D VSWN+++SGY+ +  L KA+    
Sbjct: 330 EAALPVNNALVTLYSKCGNIAVARRIFDNM-KSKDVVSWNTILSGYVESSCLDKAVEVFE 388

Query: 548 -------LVWFMMQRG--------------QRLD-------HFTFATVLSACASVATLER 579
                  L W +M  G               R+         +T+A  +SAC  + +L+ 
Sbjct: 389 EMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKH 448

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G ++H   V+   E     G+AL+ MY++CG +  A+  F +MP  +  SWN+MIS   +
Sbjct: 449 GKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQ 508

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
           HGHG +AL LF +M  +G  PD ++F+ VL+AC+H+GLVDEGF++F+SM + +G+IP  +
Sbjct: 509 HGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGED 568

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            ++ ++DLLGRAG + +  + I  MP  P   IW  +L  C  +     ELG  AA+ LF
Sbjct: 569 HYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSG--DMELGAHAADQLF 626

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           +M PQ+   Y+LL+N Y++ G+W D A+ RK M++  VKKE GCSW+   + VHVFV GD
Sbjct: 627 KMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGD 686

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR 879
             HPE   +Y+ L+ +  +MR  GYVP TK  L D+EP  KE ++  HSE++AV F L  
Sbjct: 687 TKHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLL- 745

Query: 880 NSKLP----IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             KLP    + ++KNLR+C DCH+   F+SK VGREIV+RD  RFHHF DG+CSCG+YW
Sbjct: 746 --KLPPGATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 139/551 (25%), Positives = 246/551 (44%), Gaps = 73/551 (13%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVSGYTHKGMSNEACKMFKEMVRAG 81
            +L+  Y   G L +A   FD +P   R++V    ++S Y     +  A  +F+ ++ +G
Sbjct: 92  TSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151

Query: 82  FL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC--LE 138
            L  + Y+  ++L A         +   Q+ C VLKS       VSN L+A+Y  C  LE
Sbjct: 152 SLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALE 211

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGD---------------------------- 170
           +T  AR++ +E+  +D ++W +++  Y +RGD                            
Sbjct: 212 ATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVH 271

Query: 171 ---TISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKA 225
               +  F+LF RM  E  R  L  +E+TF S+++A  ++     G  +  QI  +    
Sbjct: 272 SGMVVEAFELFRRMVLE--RVPL--DEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNF 327

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS 285
              + L V +ALV+ +++ GN   AR+IF+ M  K+VVS N ++ G              
Sbjct: 328 VPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSG-------------- 373

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
                          Y +   +D +  VF  M  K+ +SW  M+SG    G  E+A+  F
Sbjct: 374 ---------------YVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLF 418

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             MR + +   +++    +S+C  LG +  G+Q+HG  ++LG +   S  NAL+++YA  
Sbjct: 419 NRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARC 478

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
           G +     +F +MP  D VSWN++I A         EA++ +  M   G  P+ ++F+ +
Sbjct: 479 GAVKEANLMFLVMPNIDSVSWNAMISALGQ-HGHGREALELFDRMVAEGIYPDRISFLTV 537

Query: 466 LAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           L A +   +   G Q    + + + +         L+   G+ G + +   +   M    
Sbjct: 538 LTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEP 597

Query: 525 DEVSWNSMISG 535
               W +++SG
Sbjct: 598 TPSIWEAILSG 608



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 164/371 (44%), Gaps = 75/371 (20%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D     T++  YVR GD+ +A  +F+E+  +  V W  ++SGY H GM  EA ++F+ MV
Sbjct: 227 DALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMV 286

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG----LVSNVLIAMYG 134
                L+ +   SVL AC   G   F  G  VH  + +    F       V+N L+ +Y 
Sbjct: 287 LERVPLDEFTFTSVLSACANAG--FFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYS 344

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRG---DTISVF---------------- 175
            C  +   ARRIF+ ++++D++SWN+I+S Y +       + VF                
Sbjct: 345 KC-GNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVS 403

Query: 176 ------------KLFSRMQREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAM 221
                       KLF+RM+ E     +KP +YT+   I+A     S+  G    +Q+   
Sbjct: 404 GYVHGGFSEDALKLFNRMRAE----DVKPCDYTYAGAISACGELGSLKHG----KQLHGH 455

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY 281
           + + G       G+AL++ +AR G    A  +F  M   + VS N ++     G+  HG 
Sbjct: 456 LVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISA--LGQHGHGR 513

Query: 282 LIRSGLFD-MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
                LFD MVA G                       I  D +S+ T+++  + +G  +E
Sbjct: 514 EALE-LFDRMVAEG-----------------------IYPDRISFLTVLTACNHSGLVDE 549

Query: 341 AIMNFCAMRRD 351
               F +M+RD
Sbjct: 550 GFQYFESMKRD 560



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 15/204 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  +++ GF       N LI +Y R G +  A+ +F  MP+ +SVSW  ++S  
Sbjct: 447 KHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISAL 506

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKF--GMQVHCLVLKS 117
              G   EA ++F  MV  G   +R +  +VL AC   G    GF++   M+    ++  
Sbjct: 507 GQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPG 566

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRI-FEEIETRDLISWNSIISVYSQRGD----TI 172
              +  L+   L+   G   E+ D  + + FE   +     W +I+S     GD      
Sbjct: 567 EDHYTRLID--LLGRAGRIGEARDLIKTMPFEPTPS----IWEAILSGCRTSGDMELGAH 620

Query: 173 SVFKLFSRMQREGFRYSLKPNEYT 196
           +  +LF    +    Y L  N Y+
Sbjct: 621 AADQLFKMTPQHDGTYILLSNTYS 644



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 82/205 (40%), Gaps = 39/205 (19%)

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPV--RNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           V  ++LV  Y+  GR+  A  FFD +P   R+    N++IS YAR  H   A+ +F  + 
Sbjct: 89  VAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLL 148

Query: 655 LDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGE 713
             G L PD  +F  +LSA  H  L +   +H               Q  C V   G  G 
Sbjct: 149 ASGSLRPDDYSFTALLSAAGH--LPNISVRH-------------CAQLQCSVLKSGAGGV 193

Query: 714 LDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLA 773
           L              N+L+            C   E  R A  +L EM  ++A+ +  + 
Sbjct: 194 LS-----------VSNALV-------ALYMKCEALEATRDARKVLDEMPDKDALTWTTMV 235

Query: 774 NMYASGGKWEDVAKARKAMKEAEVK 798
             Y   G   DV  AR   +E +VK
Sbjct: 236 VGYVRRG---DVGAARSVFEEVDVK 257


>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 225/599 (37%), Positives = 358/599 (59%), Gaps = 7/599 (1%)

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTL-SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
           Y EA+  F  +  +G    +      L S+C  L  I   +++    +  GLD D  + N
Sbjct: 111 YHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRN 170

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
            +L ++   G +    ++F  MPE + +SWN++IG   D+     EA + +L M +    
Sbjct: 171 RVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYF-EAFRLFLMMWQXFSD 229

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
                F+ ++ A++   +   G Q+H+  +K  V  +  +  AL+  Y KCG ++D + +
Sbjct: 230 AGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCV 289

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F +M E+   V WNS+I+GY  +    +A+++ + M   G ++D+FTF+ ++  CA +A+
Sbjct: 290 FDQMPEK-TTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLAS 348

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           LE   + HA  VR     D+V  +ALVD+YSK GRI+ A   FD+MP +NV SWN++I+G
Sbjct: 349 LEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAG 408

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           Y  HG G +A+ +F +M  +G +P+HVTF+ VLSACS++GL D G++ F+SMS+ + + P
Sbjct: 409 YGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKP 468

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAAN 756
           +   ++CM++LLGR G LD+    I   P  P   +W  +L A CR + +  ELG+ AA 
Sbjct: 469 RAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTA-CRVH-KNFELGKFAAE 526

Query: 757 MLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV 816
            L+ M P+   NYV+L N+Y   G+ E+ A   + +K   ++    CSW+ +K   + F+
Sbjct: 527 KLYGMGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFI 586

Query: 817 AGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFV 876
           +GD+ H +   IY+KL EL  ++   GYVPQ KF L D++ E +E ++ YHSEK+A+AF 
Sbjct: 587 SGDKCHAQSKEIYQKLDELMLEISKHGYVPQXKFLLPDVD-EQEERVLLYHSEKLAIAFG 645

Query: 877 LTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           L   S   P++I+++ R+CGDCHSA K I+ +  REIV+RD++RFHHF DG CSCGDYW
Sbjct: 646 LINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 208/412 (50%), Gaps = 7/412 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R  K+V  Y+I SGL     + N ++ M+ KCG + D+R +F  M  K+ +SWNT+I GL
Sbjct: 148 RGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGL 207

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
              G Y EA   F  M +    + +   ++ + + A LG I  G+Q+H   LK G+  DV
Sbjct: 208 VDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDV 267

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V+ AL+ +Y+  G +     VF  MPE   V WNS+I  +A       EA+  Y +MR 
Sbjct: 268 FVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYA-LHGYSEEALSMYYEMRD 326

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           +G   +  TF  I+   +  +  +   Q HA ++++    +     AL+  Y K G ++D
Sbjct: 327 SGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIED 386

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
            + +F  M   ++ +SWN++I+GY ++    +A+ +   M+  G   +H TF  VLSAC+
Sbjct: 387 AKHVFDMMPH-KNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACS 445

Query: 573 SVATLERGMEVHACGVR-ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSW 630
                +RG E+     R   ++   +  + ++++  + G +D A       P +  V  W
Sbjct: 446 YSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMW 505

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT-FVGVLSACSHAGLVDEG 681
            ++++  A   H +  L  F+  KL G  P+ ++ +V +L+  + +G ++E 
Sbjct: 506 AALLT--ACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNXSGRLEEA 555



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 172/359 (47%), Gaps = 45/359 (12%)

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
           T+ +L++A     L     ++++   +  +GL  D Y+ + ++    + G    AR++F+
Sbjct: 133 TYDALVSACIG--LKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFD 190

Query: 256 QMIQKNVVSMN----GLME---------------------GRR----------------K 274
           +M +KN++S N    GL++                     G R                 
Sbjct: 191 EMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFA 250

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+++H   +++G+   V V   L++MY+KCG+I+D++ VF  M  K +V WN++I+G   
Sbjct: 251 GRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYAL 310

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +G  EEA+  +  MR  G+   NF+    +  CA L  +   +Q H   ++ G   D+  
Sbjct: 311 HGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVA 370

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           + AL+ LY+  G +     VF +MP  + +SWN++I  + +    V EAV+ +  M   G
Sbjct: 371 NTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGV-EAVEMFERMLHEG 429

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA-LLSCYGKCGEMDD 512
             PN VTF+ +L+A S   +   G ++   + + +      +  A ++   G+ G +D+
Sbjct: 430 MVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDE 488



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 7/199 (3%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           LK G   DVF+   LI++Y + G +  A  +FD+MP++ +V W  I++GY   G S EA 
Sbjct: 259 LKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEAL 318

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
            M+ EM  +G  ++ +    ++R C     +  +   Q H  +++     D + +  L+ 
Sbjct: 319 SMYYEMRDSGVKIDNFTFSIIIRICARL--ASLEHAKQAHAGLVRHGFGLDIVANTALVD 376

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           +Y       D A+ +F+ +  +++ISWN++I+ Y   G  +   ++F RM  EG    + 
Sbjct: 377 LYSKWGRIED-AKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEG----MV 431

Query: 192 PNEYTFGSLITAAYSSVLS 210
           PN  TF ++++A   S LS
Sbjct: 432 PNHVTFLAVLSACSYSGLS 450



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 129/263 (49%), Gaps = 13/263 (4%)

Query: 11  ILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEA 70
           ++  G   D +L N ++ ++V+ G +  A +LFDEMP++N +SW  I+ G    G   EA
Sbjct: 157 MINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEA 216

Query: 71  CKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLI 130
            ++F  M +           +++RA    G      G Q+H   LK+    D  V+  LI
Sbjct: 217 FRLFLMMWQXFSDAGSRMFVTMIRA--SAGLGLIFAGRQLHSCSLKTGVGGDVFVACALI 274

Query: 131 AMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRY 188
            MY  C  +E   C   +F+++  +  + WNSII+ Y+  G +     ++  M+  G   
Sbjct: 275 DMYSKCGSIEDAQC---VFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSG--- 328

Query: 189 SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
            +K + +TF S+I    + + S  +  Q    +V+  G   D+   +ALV  +++ G   
Sbjct: 329 -VKIDNFTF-SIIIRICARLASLEHAKQAHAGLVRH-GFGLDIVANTALVDLYSKWGRIE 385

Query: 249 YARKIFEQMIQKNVVSMNGLMEG 271
            A+ +F+ M  KNV+S N L+ G
Sbjct: 386 DAKHVFDMMPHKNVISWNALIAG 408



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 55/99 (55%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  +++HGF  D+     L+++Y + G +  A  +FD MP +N +SW  +++GY +
Sbjct: 352 AKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGN 411

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPS 102
            G   EA +MF+ M+  G + N     +VL AC   G S
Sbjct: 412 HGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLS 450


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 261/809 (32%), Positives = 422/809 (52%), Gaps = 58/809 (7%)

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG---LVSNVLIAMYGSCLESTDCARR 145
           L +VLR C          G+Q+H   + S    D     +   L+ MY       D A  
Sbjct: 35  LLAVLRGC--VSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRD-AVA 91

Query: 146 IFEEIE---TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           +F  +        + WN +I  ++  G        + +M       S  P+ +T   ++ 
Sbjct: 92  VFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPS--PDAHTLPYVVK 149

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
           +   + L    L + +    +  GL +D+YVGSALV  +A  G    AR  F+ + +++ 
Sbjct: 150 SC--AALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDC 207

Query: 263 VSMNGLMEGRRK-----------------------------------------GKEVHGY 281
           V  N +M+G  K                                         G ++H  
Sbjct: 208 VLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSL 267

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
            ++ GL   VAV N L+ MYAKC  +DD+  +F  M   D V+WN MISG  QNG + EA
Sbjct: 268 AVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEA 327

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
              F  M+R G    + +L+S L +   L  +  G+++HG  ++  ++ DV + +AL+ +
Sbjct: 328 FGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDI 387

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y     +     ++      D V  +++I  +     +  EA++ +  +      PN VT
Sbjct: 388 YFKCRDVRMAQNLYDAARAIDVVIGSTMISGYV-LNGMSEEALQMFRYLLEQCIKPNAVT 446

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
             ++L   +S +   LG Q+H  V++     +  +E+AL+  Y KCG +D    IF +MS
Sbjct: 447 IASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMS 506

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
           ++ DEV+WNSMIS +  N    +A++L   M   G + ++ T +  LSACAS+  +  G 
Sbjct: 507 QK-DEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGK 565

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           E+H   ++  ++ D+   SAL+DMY+KCG ++ A R F+ MP +N  SWNS+IS Y  HG
Sbjct: 566 EIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHG 625

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
              ++++L   M+ +G  PDHVTF+ ++SAC+HAGLV+EG + F+ M++ Y + P++E F
Sbjct: 626 LVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHF 685

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM 761
           +CMVDL  R+G+LDK  +FI  MP  P++ IW  +L A CR + R  EL   A+  LF++
Sbjct: 686 ACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHA-CRVH-RNVELADIASQELFKL 743

Query: 762 EPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDES 821
           +P N+  YVL++N+ A  G+W+ V+K R+ MK+ ++ K  G SWV + +  H+FVA D+S
Sbjct: 744 DPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKS 803

Query: 822 HPEKDLIYEKLKELNQKMRDAGYVPQTKF 850
           HPE + IY  LK L Q++R+ GYVP+   
Sbjct: 804 HPESEDIYTSLKTLLQELREEGYVPRPDL 832



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 172/569 (30%), Positives = 280/569 (49%), Gaps = 48/569 (8%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +L H      G A DV++ + L+ +Y   G L +A   FD +P+R+ V W  ++ G    
Sbjct: 161 RLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKA 220

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G  + A ++F+ M  +G   N   L   L  C     +    G Q+H L +K     +  
Sbjct: 221 GDVDGAVRLFRNMRASGCEPNFATLACFLSVCAT--DADLLSGAQLHSLAVKCGLEPEVA 278

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V+N L+AMY  C +  D A R+FE +   DL++WN +IS   Q G  +  F LF  MQR 
Sbjct: 279 VANTLLAMYAKC-QCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRS 337

Query: 185 GFRYSLKPNEYTFGSLITAAYS--------------------------SVLSGSYLLQQI 218
           G R    P+  T  SL+ A                             S L   Y   + 
Sbjct: 338 GAR----PDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRD 393

Query: 219 LAMVKK---AGLLSDLYVGSALVSGFARLGNFYYARKIF----EQMIQKNVVSMNGLMEG 271
           + M +    A    D+ +GS ++SG+   G    A ++F    EQ I+ N V++  ++ G
Sbjct: 394 VRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPG 453

Query: 272 RRK------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    G+++HGY++R+       V + L++MYAKCG +D S  +F  M  KD V+W
Sbjct: 454 CASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTW 513

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N+MIS   QNG  +EA+  F  M  +G+  +N ++ + LS+CASL  I  G++IHG  +K
Sbjct: 514 NSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIK 573

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
             + +D+   +AL+ +YA  G L   L+VF  MP+ ++VSWNS+I A+  +  LV E+V 
Sbjct: 574 GPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYG-AHGLVKESVS 632

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV-HAQVIKYNVANETTIENALLSCY 504
               M+  G+ P+ VTF+ +++A +   + + G Q+      KY +A        ++  Y
Sbjct: 633 LLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLY 692

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            + G++D   +  A M  + D   W +++
Sbjct: 693 SRSGKLDKAIQFIADMPFKPDAGIWGALL 721



 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 178/653 (27%), Positives = 309/653 (47%), Gaps = 62/653 (9%)

Query: 22  LCNTLINVYVRVGDLASASKLFDEMPDR---NSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           L   L+ +YV       A  +F  +P     +S+ W  ++ G+T  G  + A   + +M 
Sbjct: 72  LHTRLLGMYVLARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMW 131

Query: 79  R--AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
              A    + + L  V+++C   G      G  VH          D  V + L+ MY   
Sbjct: 132 SHPAAPSPDAHTLPYVVKSCAALG--AMSLGRLVHRTARAIGLANDVYVGSALVKMYADA 189

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
               + AR  F+ I  RD + WN ++    + GD     +LF  M+  G     +PN  T
Sbjct: 190 GLLGN-ARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASG----CEPNFAT 244

Query: 197 FGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
               ++  A  + +LSG+    Q+ ++  K GL  ++ V + L++ +A+      A ++F
Sbjct: 245 LACFLSVCATDADLLSGA----QLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLF 300

Query: 255 EQMIQKNVVSMNGL-----------------------------------------MEGRR 273
           E M Q ++V+ NG+                                         + G +
Sbjct: 301 ELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLK 360

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +GKEVHGY++R+ +   V + + LV++Y KC  +  +++++      D V  +TMISG  
Sbjct: 361 QGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYV 420

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            NG  EEA+  F  +    +  +  ++ S L  CAS+  + LGQQIHG  L+   +    
Sbjct: 421 LNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCY 480

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V +AL+ +YA  G L     +F  M + D+V+WNS+I +F+ +     EA+  +  M   
Sbjct: 481 VESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQN-GKPQEALDLFRQMCME 539

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G   N +T    L+A +S      G ++H   IK  +  +   E+AL+  Y KCG ++  
Sbjct: 540 GIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELA 599

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            ++F  M + ++EVSWNS+IS Y  + L+ ++++L+  M + G + DH TF  ++SACA 
Sbjct: 600 LRVFEFMPD-KNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAH 658

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSA-LVDMYSKCGRIDYASRFFDLMPVR 625
              +E G+++  C  +  L    +   A +VD+YS+ G++D A +F   MP +
Sbjct: 659 AGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFK 711



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 160/336 (47%), Gaps = 10/336 (2%)

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD---VSVSNALLSLYADAGYLSR 410
           +SS   L++ L  C S   + LG QIH   +  G  SD   +++   LL +Y  A     
Sbjct: 29  VSSADRLLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRD 88

Query: 411 CLKVFFLMPEHDQVS---WNSVIGAFADSEALVSEAVKYYLDM--RRAGWSPNGVTFINI 465
            + VF  +P     S   WN +I  F  +      AV +Y+ M    A  SP+  T   +
Sbjct: 89  AVAVFSALPRAAAASSLPWNWLIRGFT-AAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYV 147

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           + + ++     LG  VH       +AN+  + +AL+  Y   G + +    F  + ER D
Sbjct: 148 VKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPER-D 206

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
            V WN M+ G I    +  A+ L   M   G   +  T A  LS CA+ A L  G ++H+
Sbjct: 207 CVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHS 266

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
             V+  LE +V + + L+ MY+KC  +D A R F+LMP  ++ +WN MISG  ++G   +
Sbjct: 267 LAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVE 326

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           A  LF  M+  G  PD +T V +L A +    + +G
Sbjct: 327 AFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQG 362



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 160/359 (44%), Gaps = 42/359 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  I+++    DVFL + L+++Y +  D+  A  L+D     + V  + ++SGY
Sbjct: 360 KQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGY 419

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              GMS EA +MF+ ++      N   + SVL  C     +    G Q+H  VL++    
Sbjct: 420 VLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASM--AALPLGQQIHGYVLRNAYER 477

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V + L+ MY  C    D +  IF ++  +D ++WNS+IS +SQ G       LF +M
Sbjct: 478 KCYVESALMDMYAKC-GRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQM 536

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             EG +Y    N  T  + ++A  S  L   Y  ++I  +  K  + +D++  SAL+  +
Sbjct: 537 CMEGIKY----NNITISAALSACAS--LPAIYYGKEIHGVTIKGPIKADIFAESALIDMY 590

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
           A+ GN   A ++FE M  KN VS                              N +++ Y
Sbjct: 591 AKCGNLELALRVFEFMPDKNEVSW-----------------------------NSIISAY 621

Query: 302 AKCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
              G + +S S+   M       D V++  +IS     G  EE +  F  M +  L++ 
Sbjct: 622 GAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAP 680


>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
 gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 681

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 223/581 (38%), Positives = 339/581 (58%), Gaps = 8/581 (1%)

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
           S+ F+L   LS+CA LG +  G+ +       G   DV V ++LL LYA  G +   +KV
Sbjct: 108 STTFTL--ALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKV 165

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  MP  D+V+W++++  F  S     +A++ Y  MR  G   + V  I ++ A ++   
Sbjct: 166 FVRMPRRDRVTWSTMVAGFV-SAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARN 224

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            ++G  VH  ++++ +  +     +L+  Y K G +D   ++F  M  R D VSW++MIS
Sbjct: 225 VRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRND-VSWSAMIS 283

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           G+  N    +A+ L   M   G + D     + L AC+++  L+ G  VH   VR   +F
Sbjct: 284 GFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDF 342

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           + ++G+A +DMYSKCG +  A   F+++  R++  WN+MI+    HG G  ALTLF +M 
Sbjct: 343 NCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMN 402

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
             G  PDH TF  +LSA SH+GLV+EG   F  M   + + P  + + C+VDLL R+G +
Sbjct: 403 ETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLV 462

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
           ++  + +  M   P   IW  +L  C   N +K ELG   A+ + E++P +     L++N
Sbjct: 463 EEASDLLTSMKAEPTVAIWVALLSGCL--NNKKLELGESIADNILELQPDDVGVLALVSN 520

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           +YA+  KW+ V + RK MK++  KK  GCS + ++   HVFV  D+SHP+++ I  K+ +
Sbjct: 521 LYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAK 580

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRV 893
           L+ +MR  GY+P+T+F   DLE E KE  +SYHSE++A+AF +L       + I+KNLRV
Sbjct: 581 LDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRV 640

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CGDCH A K+ISKI  REIV+RD+ RFHHF DG CSC DYW
Sbjct: 641 CGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 182/369 (49%), Gaps = 11/369 (2%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R G+ V      +G  D V V + L+++YA+ G + D+  VF  M  +D V+W+TM++G 
Sbjct: 125 RGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGF 184

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
              G   +AI  +  MR DG+      +I  + +C +   + +G  +HG  L+ G+  DV
Sbjct: 185 VSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDV 244

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
             + +L+ +YA  G L    +VF LM   + VSW+++I  FA +     EA++ + +M+ 
Sbjct: 245 VTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQN-GQSDEALRLFRNMQA 303

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           +G  P+    ++ L A S+    KLG  VH  +++    N   +  A +  Y KCG +  
Sbjct: 304 SGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDFN-CILGTAAIDMYSKCGSLAS 362

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
            + +F  +S+ RD + WN+MI+    +     A+ L   M + G R DH TFA++LSA +
Sbjct: 363 AQMLFNMISD-RDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALS 421

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSA----LVDMYSKCGRIDYASRFFDLMPVR-NV 627
               +E G        R    F +         LVD+ ++ G ++ AS     M     V
Sbjct: 422 HSGLVEEGKLWFG---RMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTV 478

Query: 628 YSWNSMISG 636
             W +++SG
Sbjct: 479 AIWVALLSG 487



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 193/423 (45%), Gaps = 57/423 (13%)

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVK 223
           +S+RG   S  ++F          + +P+  TF   ++A A    L G    + +     
Sbjct: 84  HSRRGSPASALRVF-----RALPPAARPDSTTFTLALSACARLGDLRGG---ESVRDRAF 135

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG------------ 271
            AG   D++V S+L+  +AR G    A K+F +M +++ V+ + ++ G            
Sbjct: 136 DAGYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQ 195

Query: 272 -----------------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
                                         R G  VHG+L+R G+   V     LV+MYA
Sbjct: 196 MYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYA 255

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIS 362
           K G +D +  VF  M+ ++ VSW+ MISG  QNG  +EA+  F  M+  G+   + +L+S
Sbjct: 256 KNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVS 315

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
            L +C+++G++ LG+ +HG  ++   D +  +  A + +Y+  G L+    +F ++ + D
Sbjct: 316 ALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRD 374

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM---GKLGH 479
            + WN++I A   +     +A+  + +M   G  P+  TF ++L+A S   +   GKL  
Sbjct: 375 LILWNAMI-ACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWF 433

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
                  K   A +  +   L+    + G +++   +   M        W +++SG ++N
Sbjct: 434 GRMVNHFKITPAEKHYV--CLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNN 491

Query: 540 ELL 542
           + L
Sbjct: 492 KKL 494



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 110/471 (23%), Positives = 215/471 (45%), Gaps = 44/471 (9%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G+  DVF+C++L+++Y R G +  A K+F  MP R+ V+W+ +V+G+   G   +A +M+
Sbjct: 138 GYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMY 197

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
           + M   G   +   +  V++AC        + G  VH  +L+     D + +  L+ MY 
Sbjct: 198 RRMREDGVKGDEVVMIGVIQACT--AARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYA 255

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
                 D A R+F  +  R+ +SW+++IS ++Q G +    +LF  MQ  G    ++P+ 
Sbjct: 256 KN-GLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASG----IQPDS 310

Query: 195 YTFGSLITAAYSSVLSGSYLLQQILA--MVKKAGLLSDLYVGSALVSGFARLGNFYYARK 252
              G+L++A  +    G   L + +   +V++     +  +G+A +  +++ G+   A+ 
Sbjct: 311 ---GALVSALLACSNIGFLKLGRSVHGFIVRRFDF--NCILGTAAIDMYSKCGSLASAQM 365

Query: 253 IFEQMIQKNVVSMNGLM-----EGR-RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
           +F  +  ++++  N ++      GR +    +   +  +G+    A    L++  +  G 
Sbjct: 366 LFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGL 425

Query: 307 IDD-----SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
           +++      R V  F I      +  ++  L ++G  EEA     +M+ +  ++   +L 
Sbjct: 426 VEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVAL- 484

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL---- 417
             LS C +   + LG+ I    L+L  D DV V   + +LYA      +  +V  L    
Sbjct: 485 --LSGCLNNKKLELGESIADNILELQPD-DVGVLALVSNLYAATKKWDKVRQVRKLMKDS 541

Query: 418 ----MPEHDQVSWNSVIGAF-------ADSEALVSEAVKYYLDMRRAGWSP 457
               MP    +        F          E +VS+  K  L+MR+ G+ P
Sbjct: 542 GSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIP 592



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 148/324 (45%), Gaps = 19/324 (5%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +L+HG   DV    +L+++Y + G L  A ++F  M  RN VSW+ ++SG+   G S
Sbjct: 232 HGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQS 291

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           +EA ++F+ M  +G   +  AL S L AC   G    K G  VH  +++    F+ ++  
Sbjct: 292 DEALRLFRNMQASGIQPDSGALVSALLACSNIG--FLKLGRSVHGFIVRRFD-FNCILGT 348

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
             I MY  C  S   A+ +F  I  RDLI WN++I+     G       LF  M   G R
Sbjct: 349 AAIDMYSKC-GSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMR 407

Query: 188 YSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
               P+  TF SL++A ++S ++    L    +    K       YV   LV   AR G 
Sbjct: 408 ----PDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYV--CLVDLLARSGL 461

Query: 247 FYYARKIFEQMIQKNVVSM-NGLMEGRRKGKEVH-GYLIRSGLFDM----VAVGNGLVNM 300
              A  +   M  +  V++   L+ G    K++  G  I   + ++    V V   + N+
Sbjct: 462 VEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNL 521

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVS 324
           YA     D  R V + M  KDS S
Sbjct: 522 YAATKKWDKVRQVRKLM--KDSGS 543



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 95/414 (22%), Positives = 184/414 (44%), Gaps = 51/414 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASA-SKLFDEMPDRNSVSWACIVSGYT 62
           A+L  L I+    ++   L ++L   Y R GDLA+A S L       +  +W  I++ ++
Sbjct: 28  ARLHALLIVSSSASHT--LISSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHS 85

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            +G    A ++F+ +  A    +       L AC   G    + G  V      +    D
Sbjct: 86  RRGSPASALRVFRALPPAA-RPDSTTFTLALSACARLG--DLRGGESVRDRAFDAGYKDD 142

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V + L+ +Y       D A ++F  +  RD ++W+++++ +   G  +   +++ RM+
Sbjct: 143 VFVCSSLLHLYARWGAMGD-AVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMR 201

Query: 183 REGFRYSLKPNEYTFGSLI---TAAYSSVLSGS---YLLQQILAM-VKKAGLLSDLYVG- 234
            +G    +K +E     +I   TAA +  +  S   +LL+  + M V  A  L D+Y   
Sbjct: 202 EDG----VKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKN 257

Query: 235 ---------------------SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR- 272
                                SA++SGFA+ G    A ++F  M    +   +G +    
Sbjct: 258 GLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSAL 317

Query: 273 ---------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                    + G+ VHG+++R   F+ + +G   ++MY+KCG++  ++ +F  +  +D +
Sbjct: 318 LACSNIGFLKLGRSVHGFIVRRFDFNCI-LGTAAIDMYSKCGSLASAQMLFNMISDRDLI 376

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
            WN MI+    +G  ++A+  F  M   G+   + +  S LS+ +  G +  G+
Sbjct: 377 LWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGK 430


>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 260/814 (31%), Positives = 420/814 (51%), Gaps = 122/814 (14%)

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
           V +   + + + A +  +G   + ++ + L++ + +  N  YARK+F+++ + ++V+   
Sbjct: 17  VSTTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTT 76

Query: 268 LMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF--MIGKDSVSW 325
           L+                               Y+  G +  ++ +F    +  +D+VS+
Sbjct: 77  LLSA-----------------------------YSSSGNVKLAQQLFNATPLTIRDTVSY 107

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG-WIMLGQQIHGEGL 384
           N MI+          A+  F  M+R G +   F+  S LS+ + +       Q +H E +
Sbjct: 108 NAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVI 167

Query: 385 KLGLDSDVSVSNALLSLYA---------DAGYLSRCLKVFFLMPEHD--QVSWNSVIGAF 433
           KLG     SV+NALLS Y           +  ++   KVF   P++   + SW ++I  +
Sbjct: 168 KLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGY 227

Query: 434 ADSEALVS------------------------------EAVKYYLDMRRAGWSPNGVTFI 463
             ++ LV+                              EA   +  M   G   +  T+ 
Sbjct: 228 VRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYT 287

Query: 464 NILAAASS----FSMGKLGHQVHAQVIKYNVANE----TTIENALLSCYGKCGEMDDCEK 515
           ++++A  S      M   G QVH  +++  V        ++ NAL++ Y K   M +  +
Sbjct: 288 SLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARR 347

Query: 516 IFARMSERRDEVSWNSMISGYIHNEL----------LPKAMNLVWFMMQRGQRLDHF--- 562
           +F +M   RD +SWN+++SGY++ +           +P+   L W +M  G   + F   
Sbjct: 348 VFDKMPV-RDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEE 406

Query: 563 ------------------TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
                              FA  ++AC+ + +L+ G ++H+  +R   +  +  G+AL+ 
Sbjct: 407 GLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALIT 466

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
           MYS+CG ++ A   F  MP  +  SWN+MI+  A+HGHG KA+ LF QM  +  LPD +T
Sbjct: 467 MYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRIT 526

Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           F+ +L+AC+HAGL+ EG  +F +M   YG+ P  + ++ ++DLL RAG   K +  I  M
Sbjct: 527 FLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSM 586

Query: 725 PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
           P    + IW  +L A CR +    ELG +AA+ L E+ P     Y++L+NMYA+ G+W++
Sbjct: 587 PFEAGAPIWEALL-AGCRIH-GNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDE 644

Query: 785 VAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGY 844
           VA+ R  M+E  VKKE GCSWV +++ VHVF+  D  HPE   +Y  L++L  +M+  GY
Sbjct: 645 VARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGY 704

Query: 845 VPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKLP----IRIMKNLRVCGDCHSA 900
           VP TKF L D+E E KE  +S HSEK+AV + +    KLP    IR+ KNLR+CGDCH+A
Sbjct: 705 VPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIM---KLPLGATIRVFKNLRICGDCHNA 761

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           FK+ISK+V REIV+RD  RFHHF +G+CSCG+YW
Sbjct: 762 FKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 154/613 (25%), Positives = 262/613 (42%), Gaps = 116/613 (18%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD--------------- 48
           A+  H  IL  GF  + F+ N LIN+Y +  ++  A KLFD++P                
Sbjct: 24  ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSS 83

Query: 49  ------------------RNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
                             R++VS+  +++ Y+H    + A  +F +M R GFL + +   
Sbjct: 84  SGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFS 143

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST--------DC 142
           SVL A            M +HC V+K        V+N L++ Y  C  S           
Sbjct: 144 SVLSALSLIADEERHCQM-LHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMAS 202

Query: 143 ARRIFEE------------------------IETRDL---------ISWNSIISVYSQRG 169
           AR++F+E                        +  R+L         ++WN++IS Y +RG
Sbjct: 203 ARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRG 262

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS------VLSGSYLLQQILAMVK 223
                F  F RM   G    ++ +EYT+ SLI+A  S          G  +   IL  V 
Sbjct: 263 LYEEAFDTFRRMHSMG----IQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVV 318

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLI 283
           +      L V +AL++ + +      AR++F++M  ++++S N ++ G            
Sbjct: 319 EPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSG------------ 366

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
                            Y     I+++ S+F  M  ++ ++W  MISGL QNG  EE + 
Sbjct: 367 -----------------YVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLK 409

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            F  M+ +GL   +++    +++C+ LG +  GQQIH + ++LG DS +S  NAL+++Y+
Sbjct: 410 LFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYS 469

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
             G +     VF  MP  D VSWN++I A A     V +A++ +  M +    P+ +TF+
Sbjct: 470 RCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGV-KAIELFEQMMKEDILPDRITFL 528

Query: 464 NILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
            IL A +   + K G H       +Y +         L+    + G     + +   M  
Sbjct: 529 TILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPF 588

Query: 523 RRDEVSWNSMISG 535
                 W ++++G
Sbjct: 589 EAGAPIWEALLAG 601



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 141/599 (23%), Positives = 253/599 (42%), Gaps = 84/599 (14%)

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLEST-DCARRIFEEIETRDLISWNSIISVYSQR 168
           VH  +L S    +  + N LI +Y  C  S    AR++F++I   D+++  +++S YS  
Sbjct: 27  VHAHILTSGFKPNTFILNRLINIY--CKSSNITYARKLFDKIPKPDIVARTTLLSAYSSS 84

Query: 169 GDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL 228
           G+     +LF+         +++ +  ++ ++IT AYS    G   L   + M K+ G L
Sbjct: 85  GNVKLAQQLFNATP-----LTIR-DTVSYNAMIT-AYSHGNDGHAALNLFVQM-KRYGFL 136

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY------- 281
            D +  S+++S  + + +     +   QM+   V+ +  L+        +  Y       
Sbjct: 137 PDPFTFSSVLSALSLIAD----EERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSP 192

Query: 282 LIRSG--------LFDMVAVG-------NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
           L++S         +FD              ++  Y +   +  +R +   +     V+WN
Sbjct: 193 LVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWN 252

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS----LGWIMLGQQIHGE 382
            MISG  + G YEEA   F  M   G+    ++  S +S+C S    +G    G+Q+HG 
Sbjct: 253 AMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGY 312

Query: 383 GLKLGLDSD----VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
            L+  ++      +SV+NAL++ Y     +    +VF  MP  D +SWN+V+  + +++ 
Sbjct: 313 ILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQR 372

Query: 439 LV------------------------------SEAVKYYLDMRRAGWSPNGVTFINILAA 468
           +                                E +K +  M+  G  P    F   + A
Sbjct: 373 IEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITA 432

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
            S       G Q+H+QVI+    +  +  NAL++ Y +CG ++  E +F  M    D VS
Sbjct: 433 CSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMP-YVDSVS 491

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           WN+MI+    +    KA+ L   MM+     D  TF T+L+AC     ++ G        
Sbjct: 492 WNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDT-- 549

Query: 589 RACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGH 642
             C  + +  G    + L+D+  + G    A      MP       W ++++G   HG+
Sbjct: 550 -MCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGN 607


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/716 (33%), Positives = 395/716 (55%), Gaps = 48/716 (6%)

Query: 260 KNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA--KCGTIDDSRSVFRFM 317
           ++ +S+       R+ K+ H ++IR+G+F      + L  + A     +++ +R VF  +
Sbjct: 32  RHTISLIDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEI 91

Query: 318 IGKDSVSWNTMI----SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
              +S +WNT+I    SG D   C   A ++  +        + ++    + + A +  +
Sbjct: 92  PQPNSFTWNTLIRAYASGPDP-VCSIWAFLDMVS-SESQCYPNKYTFPFLIKAAAEVSSL 149

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
            LGQ +HG  +K  + SDV V+N+L+  Y   G L    KVF  + E D VSWNS+I  F
Sbjct: 150 SLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 209

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE 493
              +    +A++ +  M       + VT + +L+A +     + G +V + + +  V   
Sbjct: 210 VQ-KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVN 268

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE----------LLP 543
            T+ NA+L  Y KCG ++D +++F  M E +D V+W +M+ GY  +E           +P
Sbjct: 269 LTLANAMLDMYTKCGSIEDAKRLFDAM-EEKDNVTWTTMLDGYAISEDYEAAREVLNAMP 327

Query: 544 KAMNLVW----------------------FMMQRGQRLDHFTFATVLSACASVATLERGM 581
           K   + W                        +Q+  +L+  T  + LSACA V  LE G 
Sbjct: 328 KKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGR 387

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
            +H+   +  ++ +  + SAL+ MYSKCG ++ A   F+ +  R+V+ W++MI G A HG
Sbjct: 388 WIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHG 447

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
            G +A+ +F +M+     P+ VTF  V  ACSH GLVDE    F  M   YG++P+ + +
Sbjct: 448 CGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHY 507

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFE 760
           +C+VD+LGR+G L+K  +FI  MPI P++ +W  +LGAC   AN    E+   A   L E
Sbjct: 508 ACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEM---ACTRLLE 564

Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           +EP+N   +VLL+N+YA  GKW++V++ RK M+   +KKE GCS + +   +H F++GD 
Sbjct: 565 LEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDN 624

Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES-KEDLVSYHSEKIAVAF-VLT 878
           +HP  + +Y KL E+ +K++  GY P+    L  +E E  KE  ++ HSEK+A+ + +++
Sbjct: 625 AHPMSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLIS 684

Query: 879 RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             +   IR++KNLR+CGDCH+  K IS++  REI++RD  RFHHF +G+CSC D+W
Sbjct: 685 TEAPKAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740



 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 136/549 (24%), Positives = 254/549 (46%), Gaps = 50/549 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTL--INVYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           +  K  H  +++ G   D +  + L  I        L  A K+FDE+P  NS +W  ++ 
Sbjct: 45  RQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIR 104

Query: 60  GYTHKGMSNEACKM--FKEMV--RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVL 115
            Y      +  C +  F +MV   +    N+Y    +++A  E   S    G  +H + +
Sbjct: 105 AYA--SGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEV--SSLSLGQSLHGMAI 160

Query: 116 KSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVF 175
           KS    D  V+N LI  Y SC +  D A ++F  I+ +D++SWNS+I+ + Q+G      
Sbjct: 161 KSAVGSDVFVANSLIHCYFSCGD-LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKAL 219

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS 235
           +LF +M+ E     +K +  T   +++A   + +      +++ + +++  +  +L + +
Sbjct: 220 ELFKKMESE----DVKASHVTMVGVLSAC--AKIRDLEFGRRVCSYIEENRVNVNLTLAN 273

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN 295
           A++  + + G+   A+++F+ M +K+ V+   +++G                        
Sbjct: 274 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG------------------------ 309

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR-RDGLM 354
                YA     + +R V   M  KD V+WN +IS  +QNG   EA++ F  ++ +  + 
Sbjct: 310 -----YAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIK 364

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
            +  +L+STLS+CA +G + LG+ IH    K G+  +  V++AL+ +Y+  G L +  +V
Sbjct: 365 LNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREV 424

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  + + D   W+++IG  A      SEAV  +  M+ A   PNGVTF N+  A S   +
Sbjct: 425 FNSVEKRDVFVWSAMIGGLA-MHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 483

Query: 475 GKLGHQVHAQV-IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
                 +  ++   Y +  E      ++   G+ G ++   K    M        W +++
Sbjct: 484 VDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 543

Query: 534 SG-YIHNEL 541
               IH  L
Sbjct: 544 GACKIHANL 552


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/657 (36%), Positives = 371/657 (56%), Gaps = 38/657 (5%)

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           SVF  +   + + WNTM+ G   +     A+  +  M   GL+ ++++    L SCA   
Sbjct: 21  SVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSK 80

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL-------------- 417
               GQQIHG  LKLG + D+ V  +L+S+YA  G L    KVF                
Sbjct: 81  AFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALIT 140

Query: 418 -----------------MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
                            +P  D VSWN++I  +A++ +   EA++ + +M +    P+  
Sbjct: 141 GYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSY-KEALELFKEMMKTNVRPDEG 199

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           T + +L+A +     +LG QVH+ +  +   +   I NAL+  Y KCG+++    +F  +
Sbjct: 200 TMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGL 259

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
           S  +D VSWN++I GY H  L  +A+ L   M++ G+  +  T  ++L ACA +  ++ G
Sbjct: 260 S-CKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIG 318

Query: 581 MEVHACGVRACLEFDVV--IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
             +H    +   +      + ++L+DMY+KCG I+ A + F+ M  +++ SWN+MI G+A
Sbjct: 319 RWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFA 378

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
            HG  +    LFS+M+ +G  PD +TFVG+LSACSH+G +D G   FKSM+Q Y + P+L
Sbjct: 379 MHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKL 438

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
           E + CM+DLLG +G   + +E I  MP+ P+ +IW ++L AC R      EL    A  L
Sbjct: 439 EHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHG--NLELAESFARNL 496

Query: 759 FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
            ++EP+N  +YVLL+N+YA+ G+W++VAK R  +    +KK  GCS + +   VH F+ G
Sbjct: 497 MKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVG 556

Query: 819 DESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VL 877
           D+ HP    IY  L+E+   + +AG+VP T   L ++E E KE  + +HSEK+A+AF ++
Sbjct: 557 DKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 616

Query: 878 TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +      + I+KNLRVC +CH A K +SKI  REI+ RD  RFHHF DG CSC D+W
Sbjct: 617 STKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 236/508 (46%), Gaps = 49/508 (9%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI- 201
           A  +F  I+  + + WN+++  Y+   D +S  KL+  M   G    L PN YTF  L+ 
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLG----LLPNSYTFPFLLK 74

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
           + A S         QQI   V K G   DLYV ++L+S +A+ G    A K+F++   ++
Sbjct: 75  SCAKSKAFEEG---QQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRD 131

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
           VVS   L+ G                             YA  G I  ++ +F  +  KD
Sbjct: 132 VVSYTALITG-----------------------------YASSGNIRSAQEMFDEIPVKD 162

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            VSWN MISG  + G Y+EA+  F  M +  +     ++++ LS+CA    + LG+Q+H 
Sbjct: 163 VVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHS 222

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
                G  S++ + NAL+ LY+  G +     +F  +   D VSWN++IG +     L  
Sbjct: 223 WIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMN-LYK 281

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTIENA 499
           EA+  + +M R+G SPN VT ++IL A +      +G  +H  + K   +V N  ++  +
Sbjct: 282 EALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTS 341

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  Y KCG+++   ++F  M  +    SWN+MI G+  +       +L   M + G   
Sbjct: 342 LIDMYAKCGDIEAAHQVFNSMLHKSLS-SWNAMIFGFAMHGRANAGFDLFSRMRKNGIEP 400

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYA 615
           D  TF  +LSAC+    L+ G  +     +   ++D+         ++D+    G    A
Sbjct: 401 DDITFVGLLSACSHSGKLDLGRHIFKSMTQ---DYDITPKLEHYGCMIDLLGHSGLFKEA 457

Query: 616 SRFFDLMPVR-NVYSWNSMISGYARHGH 642
                 MP+  +   W S++    RHG+
Sbjct: 458 KEMIKTMPMEPDGVIWCSLLKACRRHGN 485



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 113/472 (23%), Positives = 195/472 (41%), Gaps = 89/472 (18%)

Query: 39  ASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQE 98
           A  +F  + + N + W  ++ GY        A K++  M+  G L N Y    +L++C +
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 99  CGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC---------------- 142
                F+ G Q+H  VLK     D  V   LI+MY       D                 
Sbjct: 79  S--KAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYT 136

Query: 143 --------------ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRY 188
                         A+ +F+EI  +D++SWN++IS Y++ G      +LF  M +   R 
Sbjct: 137 ALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVR- 195

Query: 189 SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
              P+E T  ++++A   S      L +Q+ + +   G  S+L + +AL+  +++ G   
Sbjct: 196 ---PDEGTMVTVLSACAQS--RSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVE 250

Query: 249 YARKIFEQMIQKNVVSMNGLMEGRRK---------------------------------- 274
            A  +FE +  K+VVS N L+ G                                     
Sbjct: 251 TACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACA 310

Query: 275 -------GKEVHGYLIR--SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                  G+ +H Y+ +    + +  ++   L++MYAKCG I+ +  VF  M+ K   SW
Sbjct: 311 HLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSW 370

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N MI G   +G        F  MR++G+   + + +  LS+C+  G + LG+ I      
Sbjct: 371 NAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFK---S 427

Query: 386 LGLDSDVSVS----NALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           +  D D++        ++ L   +G      ++   MP E D V W S++ A
Sbjct: 428 MTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKA 479



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 191/416 (45%), Gaps = 32/416 (7%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV     LI  Y   G++ SA ++FDE+P ++ VSW  ++SGY   G   EA ++FKEM+
Sbjct: 131 DVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMM 190

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           +     +   + +VL AC +      + G QVH  +       +  + N LI +Y  C +
Sbjct: 191 KTNVRPDEGTMVTVLSACAQS--RSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQ 248

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             + A  +FE +  +D++SWN++I  Y+          LF  M R G      PN+ T  
Sbjct: 249 -VETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSG----ESPNDVTIV 303

Query: 199 SLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           S++ A     ++  G ++   I   +K       L   ++L+  +A+ G+   A ++F  
Sbjct: 304 SILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLR--TSLIDMYAKCGDIEAAHQVFNS 361

Query: 257 MIQKNVVSMNGL-----MEGR-RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDS 310
           M+ K++ S N +     M GR   G ++   + ++G+        GL++  +  G +D  
Sbjct: 362 MLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLG 421

Query: 311 RSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLIST 363
           R +F+ M     ++     +  MI  L  +G ++EA  ++    M  DG++       S 
Sbjct: 422 RHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVI-----WCSL 476

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLKVFFLM 418
           L +C   G + L +      +K  ++ +   S  LLS +YA AG      KV  L+
Sbjct: 477 LKACRRHGNLELAESFARNLMK--VEPENPGSYVLLSNIYATAGEWDEVAKVRALL 530



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 151/323 (46%), Gaps = 20/323 (6%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  I  HGF  ++ + N LI++Y + G + +A  LF+ +  ++ VSW  ++ GYTH  + 
Sbjct: 221 HSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLY 280

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS- 126
            EA  +F+EM+R+G   N   + S+L AC   G      G  +H  + K  +      S 
Sbjct: 281 KEALLLFQEMLRSGESPNDVTIVSILPACAHLG--AIDIGRWIHVYIDKKLKDVTNAPSL 338

Query: 127 -NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
              LI MY  C +  + A ++F  +  + L SWN++I  ++  G   + F LFSRM++ G
Sbjct: 339 RTSLIDMYAKCGD-IEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNG 397

Query: 186 FRYSLKPNEYTFGSLITA-AYSSVLS-GSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
               ++P++ TF  L++A ++S  L  G ++ +   +M +   +   L     ++     
Sbjct: 398 ----IEPDDITFVGLLSACSHSGKLDLGRHIFK---SMTQDYDITPKLEHYGCMIDLLGH 450

Query: 244 LGNFYYARKIFEQMIQK--NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG----L 297
            G F  A+++ + M  +   V+  + L   RR G           L  +     G    L
Sbjct: 451 SGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLL 510

Query: 298 VNMYAKCGTIDDSRSVFRFMIGK 320
            N+YA  G  D+   V   + GK
Sbjct: 511 SNIYATAGEWDEVAKVRALLNGK 533



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 19/195 (9%)

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
           YA   F  +   N   WN+M+ GYA       AL L+  M   G LP+  TF  +L +C+
Sbjct: 18  YAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCA 77

Query: 674 HAGLVDEGFKHFKSMSQVYGLI------PQLEQFSCMVDLLGRAGELDKIEEFINKMPIT 727
            +   +EG        Q++G +      P L   + ++ +  + G L+   +  ++    
Sbjct: 78  KSKAFEEG-------QQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHR 130

Query: 728 PNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
                   + G     N       R A  M  E+  ++ V++  + + YA  G +++  +
Sbjct: 131 DVVSYTALITGYASSGNI------RSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALE 184

Query: 788 ARKAMKEAEVKKEAG 802
             K M +  V+ + G
Sbjct: 185 LFKEMMKTNVRPDEG 199


>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 224/572 (39%), Positives = 348/572 (60%), Gaps = 5/572 (0%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L  CA    ++ G+  H + L +GL +D+  SN L+++Y+  G +    +VF  MP    
Sbjct: 71  LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSL 130

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSWN++IG+   +    +EA+   L M+R G   +  T  ++L A ++         +HA
Sbjct: 131 VSWNTMIGSLTQN-GEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
             IK  +     +  ALL  Y KCG M D   +F  M +R   V+W+SM +GY+ NE+  
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDR-SVVTWSSMAAGYVQNEMYE 248

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +A+ L     + G + D F  ++V+ ACA +A +  G +++A   ++    ++ + S+L+
Sbjct: 249 QALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLI 308

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           DMY+KCG I+ + + F  +  RNV  WN+MISG +RH    + + LF +M+  G  P+ V
Sbjct: 309 DMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDV 368

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TFV VLSAC H GLV +G K+F  M++ + L P +  +SCMVD L RAG++ +  + I+K
Sbjct: 369 TFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISK 428

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           +P   ++ +W ++L A CR +    EL   AA  LF++EP N+ NY+LL+NMYA+ GKW+
Sbjct: 429 LPFNASASMWGSLL-ASCRTH-GNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWD 486

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
           +VAK RK +KE++VKKE G SW+ +KD VH+F+ G+ +HP+   IY KL E+  +++  G
Sbjct: 487 EVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLG 546

Query: 844 YVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFK 902
           Y  +T+  L  +    K++L+ +HSEK+A    +L      PIRIMKNLR+CGDCHS  K
Sbjct: 547 YKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMK 606

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             SK   R++++RD+NRFHHF +G CSCGD+W
Sbjct: 607 LASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 189/375 (50%), Gaps = 4/375 (1%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +GK  H  ++  GL   +   N L+NMY+KCG++D +R VF  M  +  VSWNTMI  L 
Sbjct: 82  QGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLT 141

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           QNG   EA+     M+R+G   S F++ S L +CA+   +   Q +H   +K  +D +V 
Sbjct: 142 QNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVF 201

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V+ ALL +YA  G +   + VF  MP+   V+W+S+   +  +E +  +A+  +      
Sbjct: 202 VATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNE-MYEQALALFRKAWET 260

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G   +     +++ A +  +    G Q++A + K    +   + ++L+  Y KCG +++ 
Sbjct: 261 GLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEES 320

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            K+F R  E+R+ V WN+MISG   +    + M L   M Q G   +  TF +VLSAC  
Sbjct: 321 YKVF-RDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGH 379

Query: 574 VATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WN 631
           +  + +G +      +   L  +V   S +VD  S+ G+I  A      +P     S W 
Sbjct: 380 MGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWG 439

Query: 632 SMISGYARHGHGDKA 646
           S+++    HG+ + A
Sbjct: 440 SLLASCRTHGNLELA 454



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 156/314 (49%), Gaps = 50/314 (15%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G   H  +L      D L SN+LI MY  C  S D AR++F+E+ +R L+SWN++I   +
Sbjct: 83  GKACHAQILLMGLKTDLLTSNILINMYSKC-GSVDFARQVFDEMPSRSLVSWNTMIGSLT 141

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKA 225
           Q G+      L  +MQREG  +S    E+T  S++ A A    LS   LL    A   KA
Sbjct: 142 QNGEENEALDLLLQMQREGTPFS----EFTISSVLCACAAKCALSECQLLH---AFAIKA 194

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-------------- 271
            +  +++V +AL+  +A+ G    A  +FE M  ++VV+ + +  G              
Sbjct: 195 AMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALF 254

Query: 272 RR---------------------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
           R+                           +GK+++  L +SG    + V + L++MYAKC
Sbjct: 255 RKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKC 314

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G I++S  VFR +  ++ V WN MISGL ++    E ++ F  M++ GL  ++ + +S L
Sbjct: 315 GGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVL 374

Query: 365 SSCASLGWIMLGQQ 378
           S+C  +G +  GQ+
Sbjct: 375 SACGHMGLVRKGQK 388



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 139/270 (51%), Gaps = 15/270 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H QIL  G   D+   N LIN+Y + G +  A ++FDEMP R+ VSW  ++   T  
Sbjct: 84  KACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQN 143

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRAC-QECGPSGFKFGMQVHCLVLKSNQTFDG 123
           G  NEA  +  +M R G   + + + SVL AC  +C  S  +    +H   +K+    + 
Sbjct: 144 GEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQL---LHAFAIKAAMDLNV 200

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V+  L+ +Y  C    D A  +FE +  R +++W+S+ + Y Q         LF    R
Sbjct: 201 FVATALLDVYAKCGLMKD-AVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALF----R 255

Query: 184 EGFRYSLKPNEYTFGSLI--TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           + +   LK +++   S+I   A  ++++ G    +Q+ A++ K+G  S+++V S+L+  +
Sbjct: 256 KAWETGLKHDQFLMSSVICACAGLAAMIEG----KQMNALLSKSGFCSNIFVASSLIDMY 311

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           A+ G    + K+F  + ++NVV  N ++ G
Sbjct: 312 AKCGGIEESYKVFRDVEKRNVVLWNAMISG 341



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 157/327 (48%), Gaps = 18/327 (5%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +L H   +K     +VF+   L++VY + G +  A  +F+ MPDR+ V+W+ + +GY 
Sbjct: 183 ECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYV 242

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
              M  +A  +F++    G   +++ + SV+ AC   G +    G Q++ L+ KS    +
Sbjct: 243 QNEMYEQALALFRKAWETGLKHDQFLMSSVICACA--GLAAMIEGKQMNALLSKSGFCSN 300

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V++ LI MY  C    + + ++F ++E R+++ WN++IS  S+   ++ V  LF +MQ
Sbjct: 301 IFVASSLIDMYAKC-GGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQ 359

Query: 183 REGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           + G    L PN+ TF S+++A      V  G         M K+  L  +++  S +V  
Sbjct: 360 QMG----LSPNDVTFVSVLSACGHMGLVRKGQKYFD---LMTKEHHLAPNVFHYSCMVDT 412

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNG--LMEGRRKGKEVHGYLIRSGLFDMVAVGNG-- 296
            +R G  + A  +  ++      SM G  L   R  G      +    LFD+    +G  
Sbjct: 413 LSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNY 472

Query: 297 --LVNMYAKCGTIDDSRSVFRFMIGKD 321
             L NMYA  G  D+   + + +   D
Sbjct: 473 LLLSNMYAANGKWDEVAKMRKLLKESD 499



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 1/114 (0%)

Query: 561 HFTFA-TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           H +F   +L  CA    L +G   HA  +   L+ D++  + L++MYSKCG +D+A + F
Sbjct: 63  HVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVF 122

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
           D MP R++ SWN+MI    ++G  ++AL L  QM+ +G      T   VL AC+
Sbjct: 123 DEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACA 176


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 227/585 (38%), Positives = 344/585 (58%), Gaps = 8/585 (1%)

Query: 354 MSSNFSLIST-LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
           + +NF   +T L+ C     I  GQ++H   +K      V +   L+  Y     L    
Sbjct: 54  LDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDAR 113

Query: 413 KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
            VF +MPE + VSW ++I A++      S+A+  ++ M R+G  PN  TF  +L +    
Sbjct: 114 HVFDVMPERNVVSWTAMISAYSQ-RGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGS 172

Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
           S   LG Q+H+ +IK N      + ++LL  Y K G++ +   IF  + ER D VS  ++
Sbjct: 173 SGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPER-DVVSCTAI 231

Query: 533 ISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL 592
           ISGY    L  +A+ L   + + G + ++ T+ +VL+A + +A L+ G +VH   +R+ +
Sbjct: 232 ISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEV 291

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
              VV+ ++L+DMYSKCG + YA R FD +  R V SWN+M+ GY++HG G + L LF+ 
Sbjct: 292 PSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNL 351

Query: 653 MKLDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSM-SQVYGLIPQLEQFSCMVDLLGR 710
           M  +  + PD VT + VLS CSH GL D+G   F  M S    + P  + + C+VD+LGR
Sbjct: 352 MIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGR 411

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
           AG ++   EF+ KMP  P++ IW  +LGAC   +    ++G    + L ++EP+NA NYV
Sbjct: 412 AGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHS--NLDIGEFVGHQLLQIEPENAGNYV 469

Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
           +L+N+YAS G+WEDV   R  M +  V KE G SW+ +   +H F A D SHP ++ +  
Sbjct: 470 ILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSA 529

Query: 831 KLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMK 889
           K++EL+ + ++AGYVP     L D++ E KE ++  HSEK+A+ F ++     +PIR++K
Sbjct: 530 KVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPESVPIRVIK 589

Query: 890 NLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           NLR+C DCH+  K+ SKI GRE+ LRD NRFH    GKCSCGDYW
Sbjct: 590 NLRICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 188/376 (50%), Gaps = 6/376 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R+G+ VH ++I++     V +   L+  Y KC ++ D+R VF  M  ++ VSW  MIS  
Sbjct: 75  REGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAY 134

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            Q G   +A+  F  M R G   + F+  + L+SC      +LG+QIH   +KL  ++ V
Sbjct: 135 SQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHV 194

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V ++LL +YA  G +     +F  +PE D VS  ++I  +A    L  EA++ +  ++R
Sbjct: 195 YVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQL-GLDEEALELFRRLQR 253

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G   N VT+ ++L A S  +    G QVH  +++  V +   ++N+L+  Y KCG +  
Sbjct: 254 EGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTY 313

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSAC 571
             +IF  + E R  +SWN+M+ GY  +    + + L   M+   + + D  T   VLS C
Sbjct: 314 ARRIFDTLHE-RTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGC 372

Query: 572 ASVATLERGMEV--HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           +     ++GM++       +  ++ D      +VDM  + GR++ A  F   MP     +
Sbjct: 373 SHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAA 432

Query: 630 -WNSMISGYARHGHGD 644
            W  ++   + H + D
Sbjct: 433 IWGCLLGACSVHSNLD 448



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 158/283 (55%), Gaps = 18/283 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H  ++K  +   V+L   LI  YV+   L  A  +FD MP+RN VSW  ++S Y
Sbjct: 75  REGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAY 134

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           + +G +++A  +F +M+R+G   N +   +VL +C   G SGF  G Q+H  ++K N   
Sbjct: 135 SQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSC--IGSSGFVLGRQIHSHIIKLNYEA 192

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V + L+ MY    +  + AR IF+ +  RD++S  +IIS Y+Q G      +LF R+
Sbjct: 193 HVYVGSSLLDMYAKDGKIHE-ARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRL 251

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL---QQILAMVKKAGLLSDLYVGSALV 238
           QREG    ++ N  T+ S++TA     LSG   L   +Q+   + ++ + S + + ++L+
Sbjct: 252 QREG----MQSNYVTYTSVLTA-----LSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLI 302

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---GKEV 278
             +++ GN  YAR+IF+ + ++ V+S N ++ G  K   G+EV
Sbjct: 303 DMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREV 345



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 147/326 (45%), Gaps = 18/326 (5%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +  H  I+K  +   V++ ++L+++Y + G +  A  +F  +P+R+ VS   I+SGY  
Sbjct: 178 GRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQ 237

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+  EA ++F+ + R G   N     SVL A    G +    G QVH  +L+S      
Sbjct: 238 LGLDEEALELFRRLQREGMQSNYVTYTSVLTALS--GLAALDHGKQVHNHLLRSEVPSYV 295

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           ++ N LI MY  C   T  ARRIF+ +  R +ISWN+++  YS+ G+   V +LF+ M  
Sbjct: 296 VLQNSLIDMYSKCGNLT-YARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMID 354

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           E     +KP+  T  ++++      L    +         K  +  D      +V    R
Sbjct: 355 EN---KVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGR 411

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVH-----GYLIRSGLFDMVAVGNG-- 296
            G    A +  ++M  +   ++ G + G      VH     G  +   L  +     G  
Sbjct: 412 AGRVEAAFEFVKKMPFEPSAAIWGCLLG---ACSVHSNLDIGEFVGHQLLQIEPENAGNY 468

Query: 297 --LVNMYAKCGTIDDSRSVFRFMIGK 320
             L N+YA  G  +D RS+   M+ K
Sbjct: 469 VILSNLYASAGRWEDVRSLRNLMLKK 494



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 3/137 (2%)

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
           +IH+  L +A+     M  RG   +   + TVL+ C     +  G  VHA  ++      
Sbjct: 36  HIHDTRLREAL---LHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPC 92

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
           V + + L+  Y KC  +  A   FD+MP RNV SW +MIS Y++ G+  +AL+LF QM  
Sbjct: 93  VYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLR 152

Query: 656 DGPLPDHVTFVGVLSAC 672
            G  P+  TF  VL++C
Sbjct: 153 SGTEPNEFTFATVLTSC 169


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 261/765 (34%), Positives = 409/765 (53%), Gaps = 40/765 (5%)

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           +  F+   +PN+      +     S L G+      L M +K    SD ++ + ++ G+ 
Sbjct: 47  KTSFKPLARPNDLNITRDLCGFVESGLMGN-----ALDMFEKMNH-SDTFIWNVIIRGYT 100

Query: 243 RLGNFYYARKIFEQMIQKNVVSMN----------GLMEGRRKGKEVHGYLIRSGLFDM-V 291
             G F  A   + +M  + + S N          G +     G++VHG LI+ G FD+ V
Sbjct: 101 NNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIG-FDLDV 159

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
            V N L++MY K G I+ +  VF  M  +D VSWN+M+SG   +G    ++M F  M R 
Sbjct: 160 YVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRL 219

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G  +  F +IS L +C+    +  G +IH + ++  L+ D+ V  +L+ +Y   G +   
Sbjct: 220 GNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYA 279

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
            +VF  +   + V+WN++IG   + + ++                P+ +T IN+L + S 
Sbjct: 280 ERVFNRIYSKNIVAWNAMIGGMQEDDKVI----------------PDVITMINLLPSCSQ 323

Query: 472 FSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
                 G  +H   I+        +E AL+  YGKCGE+   E +F +M+E+ + VSWN+
Sbjct: 324 SGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEK-NMVSWNT 382

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC 591
           M++ Y+ NE   +A+ +   ++    + D  T A+VL A A +A+   G ++H+  ++  
Sbjct: 383 MVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLG 442

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
           L  +  I +A+V MY+KCG +  A  FFD M  ++V SWN+MI  YA HG G  ++  FS
Sbjct: 443 LGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFS 502

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRA 711
           +M+  G  P+  TFV +L+ACS +GL+DEG+  F SM   YG+ P +E + CM+DLLGR 
Sbjct: 503 EMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRN 562

Query: 712 GELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVL 771
           G LD+ + FI +MP+ P + IW ++L A    N     L   AA  +  ++  N   YVL
Sbjct: 563 GNLDEAKCFIEEMPLVPTARIWGSLLAA--SRNHNDVVLAELAARHILSLKHDNTGCYVL 620

Query: 772 LANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEK 831
           L+NMYA  G+WEDV + +  MKE  + K  GCS V +      F+  D SH   +LIY+ 
Sbjct: 621 LSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDINGRSESFINQDRSHAHTNLIYDV 680

Query: 832 LKELNQKMRDAGYVPQ-TKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNS-KLPIRIMK 889
           L  L +K+ +  Y+   TKF   D+  + + +   YHS K+A+ F L   +   P+ + K
Sbjct: 681 LDILLKKIGEDIYLHSLTKFRPLDV-AKKRGNSPEYHSVKLAICFGLISTAIGNPVIVRK 739

Query: 890 NLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           N R+C DCH A K IS++  REIV+ D+  FHHF DG CSC DYW
Sbjct: 740 NTRICDDCHRAAKKISQVTKREIVVGDAKVFHHFRDGCCSCRDYW 784



 Score =  212 bits (539), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 149/541 (27%), Positives = 255/541 (47%), Gaps = 38/541 (7%)

Query: 30  YVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYAL 89
           +V  G + +A  +F++M   ++  W  I+ GYT+ G+  EA   +  M   G   + +  
Sbjct: 68  FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
             V++AC E        G +VH  ++K     D  V N LI MY   +   + A ++F+E
Sbjct: 128 PFVIKACGEL--LALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLK-IGFIELAEKVFDE 184

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
           +  RDL+SWNS++S Y   GD +S    F  M R G +         FG +      S+ 
Sbjct: 185 MPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKAD------RFGMISALGACSIE 238

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
                  +I   V ++ L  D+ V ++L+  + + G   YA ++F ++  KN+V+ N ++
Sbjct: 239 HCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMI 298

Query: 270 EGRR--------------------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
            G +                          +GK +HG+ IR      + +   LV+MY K
Sbjct: 299 GGMQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGK 358

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           CG +  +  VF  M  K+ VSWNTM++   QN  Y+EA+  F  +  + L     ++ S 
Sbjct: 359 CGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASV 418

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L + A L     G+QIH   +KLGL S+  +SNA++ +YA  G L    + F  M   D 
Sbjct: 419 LPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDV 478

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ-VH 482
           VSWN++I A+A        +++++ +MR  G+ PNG TF+++L A S   +   G    +
Sbjct: 479 VSWNTMIMAYA-IHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFN 537

Query: 483 AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
           +  ++Y +         +L   G+ G +D+ +     M        W S+++    HN++
Sbjct: 538 SMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDV 597

Query: 542 L 542
           +
Sbjct: 598 V 598



 Score =  185 bits (470), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 213/472 (45%), Gaps = 75/472 (15%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H +++K GF  DV++CN LI++Y+++G +  A K+FDEMP R+ VSW  +VSGY   G  
Sbjct: 147 HGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDG 206

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRAC--QECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
             +   FKEM+R G   +R+ + S L AC  + C     + GM++HC V++S    D +V
Sbjct: 207 LSSLMCFKEMLRLGNKADRFGMISALGACSIEHC----LRSGMEIHCQVIRSELELDIMV 262

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
              LI MYG C    D A R+F  I ++++++WN++I    +    I             
Sbjct: 263 QTSLIDMYGKC-GKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDKVI------------- 308

Query: 186 FRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
                 P+  T  +L+ +   S  +L G    + I     +   L  L + +ALV  + +
Sbjct: 309 ------PDVITMINLLPSCSQSGALLEG----KSIHGFAIRKMFLPYLVLETALVDMYGK 358

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGL----------------------------------- 268
            G    A  +F QM +KN+VS N +                                   
Sbjct: 359 CGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASV 418

Query: 269 ------MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                 +  R +GK++H Y+++ GL     + N +V MYAKCG +  +R  F  M+ KD 
Sbjct: 419 LPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDV 478

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           VSWNTMI     +G    +I  F  MR  G   +  + +S L++C+  G I  G      
Sbjct: 479 VSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNS 538

Query: 383 -GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
             ++ G+D  +     +L L    G L         MP       W S++ A
Sbjct: 539 MKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAA 590



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 153/342 (44%), Gaps = 23/342 (6%)

Query: 14  HGFAYD------VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           HGFA        + L   L+++Y + G+L  A  +F++M ++N VSW  +V+ Y      
Sbjct: 334 HGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQY 393

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA KMF+ ++      +   + SVL A  E        G Q+H  ++K     +  +SN
Sbjct: 394 KEALKMFQHILNEPLKPDAITIASVLPAVAELASRS--EGKQIHSYIMKLGLGSNTFISN 451

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            ++ MY  C +    AR  F+ +  +D++SWN++I  Y+  G   +  + FS M+ +GF 
Sbjct: 452 AIVYMYAKCGD-LQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGF- 509

Query: 188 YSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              KPN  TF SL+TA + S ++   +      +M  + G+   +     ++    R GN
Sbjct: 510 ---KPNGSTFVSLLTACSISGLIDEGWGFFN--SMKVEYGIDPGIEHYGCMLDLLGRNGN 564

Query: 247 FYYARKIFEQMIQKNVVSMNG--LMEGRRKGKEVHGYLIRSGLFDMVAVGNG----LVNM 300
              A+   E+M       + G  L   R     V   L    +  +     G    L NM
Sbjct: 565 LDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNM 624

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
           YA+ G  +D   + ++++ +  +      S +D NG  E  I
Sbjct: 625 YAEAGRWEDVDRI-KYLMKEQGLVKTVGCSMVDINGRSESFI 665



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 48/98 (48%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H  I+K G   + F+ N ++ +Y + GDL +A + FD M  ++ VSW  ++  Y 
Sbjct: 430 EGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYA 489

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
             G    + + F EM   GF  N     S+L AC   G
Sbjct: 490 IHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISG 527


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 277/873 (31%), Positives = 435/873 (49%), Gaps = 89/873 (10%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
            FAY + LC     V        S  K+FDEMPDR + +W  ++  Y   G    A  ++
Sbjct: 82  AFAYVLELCGKRRAV--------SQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALY 133

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
             M   G  L   +  ++L+AC +      + G ++H L++K      G + N L++MY 
Sbjct: 134 WNMRVEGVPLGLSSFPALLKACAKL--RDIRSGSELHSLLVKLGYHSTGFIVNALVSMYA 191

Query: 135 SCLESTDCARRIFEEIETR-DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPN 193
              +    ARR+F+  + + D + WNSI+S YS  G ++   +LF  M   G      PN
Sbjct: 192 KN-DDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG----PAPN 246

Query: 194 EYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKI 253
            YT                                        +VS       F YA+  
Sbjct: 247 SYT----------------------------------------IVSALTACDGFSYAKL- 265

Query: 254 FEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRS 312
                                GKE+H  +++S      + V N L+ MY +CG +  +  
Sbjct: 266 ---------------------GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAER 304

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           + R M   D V+WN++I G  QN  Y+EA+  F  M   G  S   S+ S +++   L  
Sbjct: 305 ILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSN 364

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
           ++ G ++H   +K G DS++ V N L+ +Y+         + F  M + D +SW +VI  
Sbjct: 365 LLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAG 424

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN 492
           +A ++  V EA++ + D+ +     + +   +IL A+S      +  ++H  +++  + +
Sbjct: 425 YAQNDCHV-EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLD 483

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
            T I+N L+  YGKC  M    ++F  + + +D VSW SMIS    N    +A+ L   M
Sbjct: 484 -TVIQNELVDVYGKCRNMGYATRVFESI-KGKDVVSWTSMISSSALNGNESEAVELFRRM 541

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA--CLEFDVVIGSALVDMYSKCG 610
           ++ G   D      +LSA AS++ L +G E+H   +R   CLE  + +  A+VDMY+ CG
Sbjct: 542 VETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV--AVVDMYACCG 599

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
            +  A   FD +  + +  + SMI+ Y  HG G  A+ LF +M+ +   PDH++F+ +L 
Sbjct: 600 DLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLY 659

Query: 671 ACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNS 730
           ACSHAGL+DEG    K M   Y L P  E + C+VD+LGRA  + +  EF+  M   P +
Sbjct: 660 ACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTA 719

Query: 731 LIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARK 790
            +W  +L A CR++  K E+G  AA  L E+EP+N  N VL++N++A  G+W DV K R 
Sbjct: 720 EVWCALLAA-CRSHSEK-EIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRA 777

Query: 791 AMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM-RDAGYVPQTK 849
            MK + ++K  GCSW+ M   VH F A D+SHPE   IYEKL E+ +K+ R+ GYV  TK
Sbjct: 778 KMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTK 837

Query: 850 FALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK 882
           F L +++   K  ++  HSE+IA+A+   R SK
Sbjct: 838 FVLHNVDEGEKVQMLHGHSERIAIAYGKERASK 870



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 151/509 (29%), Positives = 245/509 (48%), Gaps = 58/509 (11%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR-NSVSWACIVSGYTHKG 65
            H  ++K G+    F+ N L+++Y +  DL++A +LFD   ++ ++V W  I+S Y+  G
Sbjct: 167 LHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSG 226

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL- 124
            S E  ++F+EM   G   N Y + S L AC   G S  K G ++H  VLKS+     L 
Sbjct: 227 KSLETLELFREMHMTGPAPNSYTIVSALTACD--GFSYAKLGKEIHASVLKSSTHSSELY 284

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V N LIAMY  C +    A RI  ++   D+++WNS+I  Y Q        + FS M   
Sbjct: 285 VCNALIAMYTRCGKMPQ-AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 343

Query: 185 GFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           G     K +E +  S+I A+   S++L+G     ++ A V K G  S+L VG+ L+  ++
Sbjct: 344 GH----KSDEVSMTSIIAASGRLSNLLAG----MELHAYVIKHGWDSNLQVGNTLIDMYS 395

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG--------------------------- 275
           +     Y  + F +M  K+++S   ++ G  +                            
Sbjct: 396 KCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGS 455

Query: 276 --------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                         KE+H +++R GL D V + N LV++Y KC  +  +  VF  + GKD
Sbjct: 456 ILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKD 514

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            VSW +MIS    NG   EA+  F  M   GL + + +L+  LS+ ASL  +  G++IH 
Sbjct: 515 VVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHC 574

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             L+ G   + S++ A++ +YA  G L     VF  +     + + S+I A+        
Sbjct: 575 YLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYG-MHGCGK 633

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAAS 470
            AV+ +  MR    SP+ ++F+ +L A S
Sbjct: 634 AAVELFDKMRHENVSPDHISFLALLYACS 662



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 139/587 (23%), Positives = 251/587 (42%), Gaps = 98/587 (16%)

Query: 1   SKDAKLFHLQILKHG-FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           +K  K  H  +LK    + ++++CN LI +Y R G +  A ++  +M + + V+W  ++ 
Sbjct: 263 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 322

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           GY    M  EA + F +M+ AG   +  ++ S++ A      S    GM++H  V+K   
Sbjct: 323 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRL--SNLLAGMELHAYVIKHGW 380

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             +  V N LI MY  C   T    R F  +  +DLISW ++I+ Y+Q    +   +LF 
Sbjct: 381 DSNLQVGNTLIDMYSKC-NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF- 438

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
              R+  +  ++ +E   GS++ A  SSVL    ++++I   + + GLL D  + + LV 
Sbjct: 439 ---RDVAKKRMEIDEMILGSILRA--SSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVD 492

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--------------RR------------ 273
            + +  N  YA ++FE +  K+VVS   ++                RR            
Sbjct: 493 VYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVA 552

Query: 274 ---------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                          KG+E+H YL+R G     ++   +V+MYA CG +  +++VF  + 
Sbjct: 553 LLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE 612

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            K  + + +MI+    +GC + A+  F  MR + +   + S ++ L +C+  G +  G+ 
Sbjct: 613 RKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGR- 671

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
                                      G+L        +  E++   W        D   
Sbjct: 672 ---------------------------GFLK------IMEHEYELEPWPEHYVCLVDMLG 698

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS---MGKLGHQVHAQVIKYNVANETT 495
             +  V+ +  ++     P    +  +LAA  S S   +G++  Q   ++   N  N   
Sbjct: 699 RANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVL 758

Query: 496 IENALLSCYGKCGEMDDCEKIFARMS----ERRDEVSWNSMISGYIH 538
           + N     + + G  +D EK+ A+M     E+    SW  M  G +H
Sbjct: 759 VSNV----FAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEM-DGKVH 800


>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 225/599 (37%), Positives = 358/599 (59%), Gaps = 7/599 (1%)

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTL-SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
           Y EA+  F  +  +G    +      L S+C  L  I   +++    +  GLD D  + N
Sbjct: 111 YHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRN 170

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
            +L ++   G +    ++F  MPE + +SWN++IG   D+     EA + +L M +    
Sbjct: 171 RVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYF-EAFRLFLMMWQDFSD 229

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
                F+ ++ A++   +   G Q+H+  +K  V  +  +  AL+  Y KCG ++D + +
Sbjct: 230 AGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCV 289

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F +M E+   V WNS+I+GY  +    +A+++ + M   G ++D+FTF+ ++  CA +A+
Sbjct: 290 FDQMPEK-TTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLAS 348

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           LE   + HA  VR     D+V  +ALVD+YSK GRI+ A   FD+MP +NV SWN++I+G
Sbjct: 349 LEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAG 408

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           Y  HG G +A+ +F +M  +G +P+HVTF+ VLSACS++GL D G++ F+SMS+ + + P
Sbjct: 409 YGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKP 468

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAAN 756
           +   ++CM++LLGR G LD+    I   P  P   +W  +L A CR + +  ELG+ AA 
Sbjct: 469 RAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTA-CRVH-KNFELGKFAAE 526

Query: 757 MLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV 816
            L+ M P+   NYV+L N+Y   G+ E+ A   + +K   ++    CSW+ +K   + F+
Sbjct: 527 KLYGMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFI 586

Query: 817 AGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFV 876
           +GD+ H +   IY+KL EL  ++   GYVPQ KF L D++ E +E ++ YHSEK+A+AF 
Sbjct: 587 SGDKCHAQSKEIYQKLDELMLEISKHGYVPQDKFLLPDVD-EQEERVLLYHSEKLAIAFG 645

Query: 877 LTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           L   S   P++I+++ R+CGDCHSA K I+ +  REIV+RD++RFHHF DG CSCGDYW
Sbjct: 646 LINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 214/455 (47%), Gaps = 43/455 (9%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R  K+V  Y+I SGL     + N ++ M+ KCG + D+R +F  M  K+ +SWNT+I GL
Sbjct: 148 RGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGL 207

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
              G Y EA   F  M +D   + +   ++ + + A LG I  G+Q+H   LK G+  DV
Sbjct: 208 VDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDV 267

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V+ AL+ +Y+  G +     VF  MPE   V WNS+I  +A       EA+  Y +MR 
Sbjct: 268 FVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYA-LHGYSEEALSMYYEMRD 326

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           +G   +  TF  I+   +  +  +   Q HA ++++    +     AL+  Y K G ++D
Sbjct: 327 SGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIED 386

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
            + +F  M   ++ +SWN++I+GY ++    +A+ +   M+  G   +H TF  VLSAC+
Sbjct: 387 AKHVFDMMPH-KNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACS 445

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
                +RG E+                             +  SR   + P    Y+   
Sbjct: 446 YSGLSDRGWEI----------------------------FESMSRDHKIKPRAMHYA--C 475

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVT-FVGVLSACSHAGLVDEGFKHFK-SMSQ 690
           MI    R G  D+A  L      D P    V  +  +L+AC     V + F+  K +  +
Sbjct: 476 MIELLGREGLLDEAFALIK----DAPFKPTVNMWAALLTACR----VHKNFELGKFAAEK 527

Query: 691 VYGLIPQ-LEQFSCMVDLLGRAGELDKIEEFINKM 724
           +YG+ P+ L  +  ++++  R+G L++    I  +
Sbjct: 528 LYGMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTL 562



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 172/359 (47%), Gaps = 45/359 (12%)

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
           T+ +L++A     L     ++++   +  +GL  D Y+ + ++    + G    AR++F+
Sbjct: 133 TYDALVSACIG--LKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFD 190

Query: 256 QMIQKNVVSMN----GLME---------------------GRR----------------K 274
           +M +KN++S N    GL++                     G R                 
Sbjct: 191 EMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFA 250

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+++H   +++G+   V V   L++MY+KCG+I+D++ VF  M  K +V WN++I+G   
Sbjct: 251 GRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYAL 310

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +G  EEA+  +  MR  G+   NF+    +  CA L  +   +Q H   ++ G   D+  
Sbjct: 311 HGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVA 370

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           + AL+ LY+  G +     VF +MP  + +SWN++I  + +    V EAV+ +  M   G
Sbjct: 371 NTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGV-EAVEMFERMLHEG 429

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA-LLSCYGKCGEMDD 512
             PN VTF+ +L+A S   +   G ++   + + +      +  A ++   G+ G +D+
Sbjct: 430 MVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDE 488



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 7/199 (3%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           LK G   DVF+   LI++Y + G +  A  +FD+MP++ +V W  I++GY   G S EA 
Sbjct: 259 LKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEAL 318

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
            M+ EM  +G  ++ +    ++R C     +  +   Q H  +++     D + +  L+ 
Sbjct: 319 SMYYEMRDSGVKIDNFTFSIIIRICARL--ASLEHAKQAHAGLVRHGFGLDIVANTALVD 376

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           +Y       D A+ +F+ +  +++ISWN++I+ Y   G  +   ++F RM  EG    + 
Sbjct: 377 LYSKWGRIED-AKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEG----MV 431

Query: 192 PNEYTFGSLITAAYSSVLS 210
           PN  TF ++++A   S LS
Sbjct: 432 PNHVTFLAVLSACSYSGLS 450



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 129/263 (49%), Gaps = 13/263 (4%)

Query: 11  ILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEA 70
           ++  G   D +L N ++ ++V+ G +  A +LFDEMP++N +SW  I+ G    G   EA
Sbjct: 157 MINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEA 216

Query: 71  CKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLI 130
            ++F  M +           +++RA    G      G Q+H   LK+    D  V+  LI
Sbjct: 217 FRLFLMMWQDFSDAGSRMFVTMIRA--SAGLGLIFAGRQLHSCSLKTGVGGDVFVACALI 274

Query: 131 AMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRY 188
            MY  C  +E   C   +F+++  +  + WNSII+ Y+  G +     ++  M+  G   
Sbjct: 275 DMYSKCGSIEDAQC---VFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSG--- 328

Query: 189 SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
            +K + +TF S+I    + + S  +  Q    +V+  G   D+   +ALV  +++ G   
Sbjct: 329 -VKIDNFTF-SIIIRICARLASLEHAKQAHAGLVRH-GFGLDIVANTALVDLYSKWGRIE 385

Query: 249 YARKIFEQMIQKNVVSMNGLMEG 271
            A+ +F+ M  KNV+S N L+ G
Sbjct: 386 DAKHVFDMMPHKNVISWNALIAG 408



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 55/99 (55%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  +++HGF  D+     L+++Y + G +  A  +FD MP +N +SW  +++GY +
Sbjct: 352 AKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGN 411

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPS 102
            G   EA +MF+ M+  G + N     +VL AC   G S
Sbjct: 412 HGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLS 450


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 246/647 (38%), Positives = 361/647 (55%), Gaps = 55/647 (8%)

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL-DQNGCYEEAIMNFCAMR 349
           V   N L+  Y +CG ID +  VF  M  K +V+WN++++    + G +E A   F  + 
Sbjct: 41  VIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKIP 100

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           +   +S N  L        +  W  LG     G    + L  DV+  N ++S  A  G +
Sbjct: 101 QPNTVSYNIML--------ACHWHHLGVHDARGFFDSMPL-KDVASWNTMISALAQVGLM 151

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
               ++F  MPE + VSW++++  +     L +    +Y    R+               
Sbjct: 152 GEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRS--------------- 196

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
                           VI +          A+++ Y K G ++  E++F  MS  R  V+
Sbjct: 197 ----------------VITWT---------AMITGYMKFGRVELAERLFQEMS-MRTLVT 230

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           WN+MI+GY+ N      + L   M++ G + +  +  +VL  C++++ L+ G +VH    
Sbjct: 231 WNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 290

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
           +  L  D   G++LV MYSKCG +  A   F  +P ++V  WN+MISGYA+HG G KAL 
Sbjct: 291 KCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALR 350

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           LF +MK +G  PD +TFV VL AC+HAGLVD G ++F +M + +G+  + E ++CMVDLL
Sbjct: 351 LFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLL 410

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
           GRAG+L +  + I  MP  P+  I+ T+LGA CR + +   L   AA  L E++P  A  
Sbjct: 411 GRAGKLSEAVDLIKSMPFKPHPAIYGTLLGA-CRIH-KNLNLAEFAAKNLLELDPTIATG 468

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
           YV LAN+YA+  +W+ VA  R++MK+  V K  G SW+ +   VH F + D  HPE   I
Sbjct: 469 YVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASI 528

Query: 829 YEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNS-KLPIRI 887
           +EKLK+L +KM+ AGYVP  +F L D+  E KE L+ +HSEK+A+AF L +    +PIR+
Sbjct: 529 HEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIRV 588

Query: 888 MKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            KNLRVCGDCHSA K+IS I GREI++RD+ RFHHF DG CSC DYW
Sbjct: 589 FKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 127/561 (22%), Positives = 245/561 (43%), Gaps = 78/561 (13%)

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           + SN LIA Y  C +  D A R+FE+++ +  ++WNSI++ ++++              R
Sbjct: 42  IASNKLIASYVRCGD-IDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHF-------EYAR 93

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           + F    +PN  ++  ++   +  +  G +  +     +     L D+   + ++S  A+
Sbjct: 94  QLFEKIPQPNTVSYNIMLACHWHHL--GVHDARGFFDSMP----LKDVASWNTMISALAQ 147

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYL--IRSGLFDMVAVGNGLVNMY 301
           +G    AR++F  M +KN VS + ++ G     ++   +    +     V     ++  Y
Sbjct: 148 VGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGY 207

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
            K G ++ +  +F+ M  +  V+WN MI+G  +NG  E+ +  F  M   G+  +  SL 
Sbjct: 208 MKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLT 267

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S L  C++L  + LG+Q+H    K  L SD +   +L+S+Y+  G L    ++F  +P  
Sbjct: 268 SVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRK 327

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D V WN++I  +A   A   +A++ + +M++ G  P+ +TF+ +L A +   +  LG Q 
Sbjct: 328 DVVCWNAMISGYAQHGA-GKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQ- 385

Query: 482 HAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           +   ++ +   ET  E+   ++   G+ G++ +   +   M  +                
Sbjct: 386 YFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPA------------ 433

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
                                   + T+L AC     + + + +     +  LE D  I 
Sbjct: 434 -----------------------IYGTLLGAC----RIHKNLNLAEFAAKNLLELDPTIA 466

Query: 600 SA---LVDMYSKCGRIDYASRFFDLMPVRNV-----YSW---NSMISGYARHGH------ 642
           +    L ++Y+   R D+ +     M   NV     YSW   NS++ G+           
Sbjct: 467 TGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELA 526

Query: 643 --GDKALTLFSQMKLDGPLPD 661
              +K   L  +MKL G +PD
Sbjct: 527 SIHEKLKDLEKKMKLAGYVPD 547



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 100/445 (22%), Positives = 186/445 (41%), Gaps = 101/445 (22%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +V   N LI  YVR GD+ SA ++F++M  +++V+W  I++ +  K              
Sbjct: 40  NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKK-------------- 85

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
                                 P  F++  Q+   + + N     +  N+++A +   L 
Sbjct: 86  ----------------------PGHFEYARQLFEKIPQPNT----VSYNIMLACHWHHLG 119

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             D AR  F+ +  +D+ SWN++IS  +Q G      +LFS M  +              
Sbjct: 120 VHD-ARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFSAMPEKN------------- 165

Query: 199 SLITAAYSSVLSGSYLLQQILAMVK--KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
                ++S+++SG      + A V+   A  +  +   +A+++G+ + G    A ++F++
Sbjct: 166 ---CVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAERLFQE 222

Query: 257 MIQKNVVSMNGLMEGR-----------------------------------------RKG 275
           M  + +V+ N ++ G                                          + G
Sbjct: 223 MSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLG 282

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           K+VH  + +  L      G  LV+MY+KCG + D+  +F  +  KD V WN MISG  Q+
Sbjct: 283 KQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQH 342

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSV 394
           G  ++A+  F  M+++GL     + ++ L +C   G + LG Q      +  G+++    
Sbjct: 343 GAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEH 402

Query: 395 SNALLSLYADAGYLSRCLKVFFLMP 419
              ++ L   AG LS  + +   MP
Sbjct: 403 YACMVDLLGRAGKLSEAVDLIKSMP 427



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  + K   + D     +L+++Y + GDL  A +LF ++P ++ V W  ++SGY   
Sbjct: 283 KQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQH 342

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G   +A ++F EM + G   +     +VL AC   G
Sbjct: 343 GAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAG 378



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 43/237 (18%)

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH-GHGDKALTLFSQM 653
           +V+  + L+  Y +CG ID A R F+ M V++  +WNS+++ +A+  GH + A  LF ++
Sbjct: 40  NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI 99

Query: 654 KLDGPLPDHVTFVGVLSAC--SHAGLVD-EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
               P P+ V++  ++ AC   H G+ D  GF  F SM      +  +  ++ M+  L +
Sbjct: 100 ----PQPNTVSY-NIMLACHWHHLGVHDARGF--FDSMP-----LKDVASWNTMISALAQ 147

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGA------------CCRANCRKT---------- 748
            G + +     + MP   N + W  ++              C  A   ++          
Sbjct: 148 VGLMGEARRLFSAMP-EKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITG 206

Query: 749 --ELGR-KAANMLF-EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA 801
             + GR + A  LF EM  +  V +  +   Y   G+ ED  +  + M E  VK  A
Sbjct: 207 YMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNA 263


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 263/787 (33%), Positives = 413/787 (52%), Gaps = 56/787 (7%)

Query: 159 NSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQI 218
           N+++++Y + GDT S  KLF +M         K N  T+ SLI+  Y  + +    L ++
Sbjct: 98  NNLLNMYCKCGDTRSADKLFDKMS--------KSNIVTYNSLISG-YVQMSN----LDKV 144

Query: 219 LAMVKKA---GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG 275
           + +  KA   GL  D Y  +  ++  ++ GN                            G
Sbjct: 145 MILFDKARRLGLKLDKYTCAGALTACSQSGNL-------------------------SAG 179

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           K +HG ++  GL   V + N L++MY+KCG +D +R +F      D VSWN++I+G  QN
Sbjct: 180 KMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQN 239

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL--GWIMLGQQIHGEGLKLGLDSDVS 393
           G YEE +     M ++GL  + ++L S L +C+S   G  M G  +H   +KLGL  DV 
Sbjct: 240 GKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVV 299

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL----VSEAVKYYLD 449
           V  ALL +YA  G L   +++F  M + + V +N+++      E +      +A+  + +
Sbjct: 300 VGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFE 359

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M+  G  P+  T+ ++L A       K   QVHA + K  + ++  I + L+  Y   G 
Sbjct: 360 MKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGS 419

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           M D    F  +      V   +MI GY+ N     A++L + ++   ++ D F  +T++S
Sbjct: 420 MMDALLCFNSI-HNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMS 478

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           +CA++  L  G ++     +  +    +  ++ + MY+K G +  A+  F  M   ++ S
Sbjct: 479 SCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVS 538

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           W++MI   A+HGH  +AL  F  MK  G  P+H  F+GVL ACSH GLV+EG ++F +M 
Sbjct: 539 WSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTME 598

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
           + Y +   ++   C+VDLLGRAG L   E  I ++      ++WR +L A CR + + T 
Sbjct: 599 KDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSA-CRIH-KDTV 656

Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMK 809
             ++ A  + E+EP  + +YVLL N+Y   G     +K R  M+E  +KKE G SW+ + 
Sbjct: 657 TAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIG 716

Query: 810 DGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFAL-FDLEPESKEDLVSYHS 868
           D V+ FV+GD SH     IY KL E+   +     +   K  L + +E E   + V+YHS
Sbjct: 717 DKVYSFVSGDRSHKNSGQIYAKLDEM---LATTKRLDSAKDILGYKIEHEHLTN-VNYHS 772

Query: 869 EKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGK 927
           EK+AVAF VL  +   P+R+MKNLR+C DCH   K  S +  RE+++RDS RFHHF DG 
Sbjct: 773 EKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGS 832

Query: 928 CSCGDYW 934
           CSCGDYW
Sbjct: 833 CSCGDYW 839



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 158/579 (27%), Positives = 263/579 (45%), Gaps = 57/579 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           KL H  ++K  F   +FL N L+N+Y + GD  SA KLFD+M   N V++  ++SGY   
Sbjct: 79  KLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQM 138

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
              ++   +F +  R G  L++Y     L AC + G      G  +H L+L        +
Sbjct: 139 SNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSG--NLSAGKMIHGLILVYGLGSQVV 196

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           ++N LI MY  C +  D AR +F+  +  D +SWNS+I+ Y Q G    +  +  +M + 
Sbjct: 197 LTNSLIDMYSKCGQ-VDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQN 255

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILA-MVKKAGLLSDLYVGSALVSGFAR 243
           G  +    N YT GS + A  SS  +G  +   +L     K GL  D+ VG+AL+  +A+
Sbjct: 256 GLAF----NTYTLGSALKAC-SSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAK 310

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------------------------- 274
            G+   A +IF+QM+ KNVV  N +M G  +                             
Sbjct: 311 TGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMF 370

Query: 275 -----------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                             K+VH  + ++GL     +G+ L+++Y+  G++ D+   F  +
Sbjct: 371 TYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSI 430

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
                V    MI G  QNG +E A+  F  +         F   + +SSCA++G +  G+
Sbjct: 431 HNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGE 490

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           QI G   K+G+       N+ + +YA +G L      F  M   D VSW+++I + A   
Sbjct: 491 QIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQ-H 549

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTI 496
               EA++++  M+  G  PN   F+ +L A S   + + G +    + K Y +      
Sbjct: 550 GHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKH 609

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
              ++   G+ G + D E +  R+    + V W +++S 
Sbjct: 610 CVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSA 648



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 212/414 (51%), Gaps = 9/414 (2%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK VH ++I++     + + N L+NMY KCG    +  +F  M   + V++N++ISG  Q
Sbjct: 78  GKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQ 137

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
               ++ ++ F   RR GL    ++    L++C+  G +  G+ IHG  L  GL S V +
Sbjct: 138 MSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVL 197

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           +N+L+ +Y+  G +     +F    + D VSWNS+I  +  +     E +     M + G
Sbjct: 198 TNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQN-GKYEELLTILQKMHQNG 256

Query: 455 WSPNGVTFINILAAASS-FSMGKL-GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            + N  T  + L A SS F+  K+ G  +H   IK  +  +  +  ALL  Y K G +DD
Sbjct: 257 LAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDD 316

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLP-----KAMNLVWFMMQRGQRLDHFTFATV 567
             +IF +M + ++ V +N+M++G +  E +      KA+NL + M   G +   FT++++
Sbjct: 317 AIQIFDQMVD-KNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSL 375

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           L AC  V   +   +VHA   +  L  D  IGS L+D+YS  G +  A   F+ +    +
Sbjct: 376 LKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTI 435

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
               +MI GY ++G  + AL+LF ++      PD      ++S+C++ G++  G
Sbjct: 436 VPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSG 489



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 184/381 (48%), Gaps = 19/381 (4%)

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           +  + S    G +  G+ +H   +K      + + N LL++Y   G      K+F  M +
Sbjct: 63  VKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSK 122

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            + V++NS+I  +     L  + +  +   RR G   +  T    L A S       G  
Sbjct: 123 SNIVTYNSLISGYVQMSNL-DKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKM 181

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +H  ++ Y + ++  + N+L+  Y KCG++D    +F   S++ D VSWNS+I+GY+ N 
Sbjct: 182 IHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDH-SDKLDGVSWNSLIAGYVQNG 240

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER--GMEVHACGVRACLEFDVVI 598
              + + ++  M Q G   + +T  + L AC+S     +  G  +H   ++  L  DVV+
Sbjct: 241 KYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVV 300

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGD-----KALTLFSQM 653
           G+AL+DMY+K G +D A + FD M  +NV  +N+M++G  +    +     KAL LF +M
Sbjct: 301 GTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEM 360

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY---GLIPQLEQFSCMVDLLGR 710
           K  G  P   T+  +L AC    ++ E FK  K +  +    GL+      S ++DL   
Sbjct: 361 KSCGIKPSMFTYSSLLKAC----IIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSV 416

Query: 711 AGE-LDKIEEF--INKMPITP 728
            G  +D +  F  I+ + I P
Sbjct: 417 LGSMMDALLCFNSIHNLTIVP 437



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 162/309 (52%), Gaps = 13/309 (4%)

Query: 460 VTFINILAAASSFSMGKLGH--QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           V ++ ++ +A+    GKL H   VH+ +IK +      ++N LL+ Y KCG+    +K+F
Sbjct: 60  VDYVKLVQSATK--TGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLF 117

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
            +MS + + V++NS+ISGY+    L K M L     + G +LD +T A  L+AC+    L
Sbjct: 118 DKMS-KSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNL 176

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
             G  +H   +   L   VV+ ++L+DMYSKCG++DYA   FD     +  SWNS+I+GY
Sbjct: 177 SAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGY 236

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY----G 693
            ++G  ++ LT+  +M  +G   +  T    L ACS       G K F +M   +    G
Sbjct: 237 VQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNF---NGCKMFGTMLHDHAIKLG 293

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           L   +   + ++D+  + G LD   +  ++M +  N +++  ++    +    + +   K
Sbjct: 294 LHLDVVVGTALLDMYAKTGSLDDAIQIFDQM-VDKNVVMYNAMMAGLLQQETIEDKCAYK 352

Query: 754 AANMLFEME 762
           A N+ FEM+
Sbjct: 353 ALNLFFEMK 361



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 1/157 (0%)

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
           L+   +  ++ +      L  G  VH+  ++      + + + L++MY KCG    A + 
Sbjct: 57  LESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKL 116

Query: 619 FDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLV 678
           FD M   N+ ++NS+ISGY +  + DK + LF + +  G   D  T  G L+ACS +G +
Sbjct: 117 FDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNL 176

Query: 679 DEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD 715
             G K    +  VYGL  Q+   + ++D+  + G++D
Sbjct: 177 SAG-KMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVD 212



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 12/207 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K AK  H  + K+G   D ++ + LI++Y  +G +  A   F+ + +   V    ++ GY
Sbjct: 386 KFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGY 445

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G    A  +F E++      + +   +++ +C   G    + G Q+     K   + 
Sbjct: 446 LQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGM--LRSGEQIQGHATKVGISR 503

Query: 122 DGLVSNVLIAMYGSCLESTD--CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             +  N  I MY    +S D   A   F+++E  D++SW+++I   +Q G  +   + F 
Sbjct: 504 FTIFQNSQIWMYA---KSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFE 560

Query: 180 RMQREGFRYSLKPNEYTF-GSLITAAY 205
            M+  G    ++PN + F G LI  ++
Sbjct: 561 LMKSCG----IEPNHFAFLGVLIACSH 583


>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 248/704 (35%), Positives = 383/704 (54%), Gaps = 50/704 (7%)

Query: 278  VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
            +H   +++G    +   N L+ +Y K   +D +R +F  +  +++ +W  +ISG  + G 
Sbjct: 311  LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGS 370

Query: 338  YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW-IMLGQQIHGEGLKLGLDSDVSVSN 396
             E     F  MR  G   + ++L S+L  C SL   + LG+ +H   L+ G+D+DV + N
Sbjct: 371  SEVVFKLFREMRAKGACPNQYTL-SSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGN 429

Query: 397  ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF---ADSEA------------LVS 441
            ++L LY          +VF LM E D VSWN +I A+    D E             +VS
Sbjct: 430  SILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVS 489

Query: 442  ---------------EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
                           +A++    M   G   + VTF   L  +SS S+ +LG Q+H  V+
Sbjct: 490  WNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVL 549

Query: 487  KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE---------------RRDEVSWNS 531
            K+    +  I ++L+  Y KCG MD+   +   +                 +   VSW  
Sbjct: 550  KFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGL 609

Query: 532  MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC 591
            M+SGY+ N      +     M++    +D  T  T++SACA+   LE G  VHA   +  
Sbjct: 610  MVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIG 669

Query: 592  LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
               D  +GS+L+DMYSK G +D A   F      N+  W SMISG A HG G +A+ LF 
Sbjct: 670  HRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFE 729

Query: 652  QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRA 711
            +M   G +P+ VTF+GVL+AC HAGL++EG ++F+ M   Y + P +E  + MVDL GRA
Sbjct: 730  EMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRA 789

Query: 712  GELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVL 771
            G L + + FI +  I+  + +W++ L + CR + +  E+G+  + ML ++ P +   YVL
Sbjct: 790  GHLTETKNFIFENGISHLTSVWKSFLSS-CRLH-KNVEMGKWVSEMLLQVAPSDPGAYVL 847

Query: 772  LANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEK 831
            L+NM AS  +W++ A+ R  M +  +KK+ G SW+ +KD +H F+ GD SHP+ + IY  
Sbjct: 848  LSNMCASNHRWDEAARVRSLMHQRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQDEEIYSY 907

Query: 832  LKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKN 890
            L  L  ++++ GY    K  + D+E E  E L+S+HSEK+AV F ++   ++ PIRI+KN
Sbjct: 908  LDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKN 967

Query: 891  LRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            LR+C DCH+  K+ S+++ REI+LRD +RFHHF  G CSCGDYW
Sbjct: 968  LRICTDCHNFIKYASQLLDREIILRDIHRFHHFKHGGCSCGDYW 1011



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 129/546 (23%), Positives = 242/546 (44%), Gaps = 58/546 (10%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K+G    +   N L+ +YV+  ++  A KLFDE+P RN+ +W  ++SG++  G 
Sbjct: 311 LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGS 370

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           S    K+F+EM   G   N+Y L S+ + C        + G  VH  +L++    D ++ 
Sbjct: 371 SEVVFKLFREMRAKGACPNQYTLSSLFKCCSL--DINLQLGKGVHAWMLRNGIDADVVLG 428

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N ++ +Y  C +  + A R+FE +   D++SWN +IS Y + GD      +F R+     
Sbjct: 429 NSILDLYLKC-KVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRL----- 482

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
                             Y  V+S + ++  ++    +   L  LY    +V        
Sbjct: 483 -----------------PYKDVVSWNTIVDGLMQFGYERQALEQLY---CMVECGTEFSV 522

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
             ++  +        V            G+++HG +++ G      + + LV MY KCG 
Sbjct: 523 VTFSIALILSSSLSLV----------ELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGR 572

Query: 307 IDDSRSVFR-----FMIGKDS-----------VSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           +D++  V +     F+   ++           VSW  M+SG   NG YE+ +  F  M R
Sbjct: 573 MDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVR 632

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
           + ++    ++ + +S+CA+ G +  G+ +H    K+G   D  V ++L+ +Y+ +G L  
Sbjct: 633 ELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDD 692

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
              +F    E + V W S+I   A       +A+  + +M   G  PN VTF+ +L A  
Sbjct: 693 AWTIFRQTNEPNIVFWTSMISGCA-LHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACC 751

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
              + + G + + +++K        +E+  +++  YG+ G + + +              
Sbjct: 752 HAGLLEEGCR-YFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSV 810

Query: 529 WNSMIS 534
           W S +S
Sbjct: 811 WKSFLS 816



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 153/601 (25%), Positives = 263/601 (43%), Gaps = 61/601 (10%)

Query: 110 VHCLVLK--SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQ 167
           +H L +K  S QT +   +N L+ +Y     + D AR++F+EI  R+  +W  +IS +S+
Sbjct: 311 LHALSVKNGSLQTLNS--ANYLLTLYVKS-SNMDHARKLFDEIPQRNTQTWTILISGFSR 367

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
            G +  VFKLF  M+ +G      PN+YT  SL      S+     L + + A + + G+
Sbjct: 368 AGSSEVVFKLFREMRAKG----ACPNQYTLSSLFKCC--SLDINLQLGKGVHAWMLRNGI 421

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGL 287
            +D+ +G++++  + +   F YA ++FE M + +VVS N +                   
Sbjct: 422 DADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIM------------------- 462

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
                     ++ Y + G ++ S  +FR +  KD VSWNT++ GL Q G   +A+     
Sbjct: 463 ----------ISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYC 512

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M   G   S  +    L   +SL  + LG+Q+HG  LK G   D  + ++L+ +Y   G 
Sbjct: 513 MVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGR 572

Query: 408 LSRCLKVFFLMP----------------EHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           +     V   +P                +   VSW  ++  +        + +K +  M 
Sbjct: 573 MDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYV-WNGKYEDGLKTFRLMV 631

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
           R     +  T   I++A ++  + + G  VHA   K     +  + ++L+  Y K G +D
Sbjct: 632 RELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLD 691

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
           D   IF R +   + V W SMISG   +    +A+ L   M+ +G   +  TF  VL+AC
Sbjct: 692 DAWTIF-RQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNAC 750

Query: 572 ASVATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS- 629
                LE G         A C+   V   +++VD+Y + G +     F     + ++ S 
Sbjct: 751 CHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSV 810

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           W S +S    H + +      S+M L     D   +V + + C+     DE  +    M 
Sbjct: 811 WKSFLSSCRLHKNVEMG-KWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMH 869

Query: 690 Q 690
           Q
Sbjct: 870 Q 870


>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/662 (35%), Positives = 362/662 (54%), Gaps = 43/662 (6%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           + K++H + +++      +V + L  +Y  C  +  +R +F  +     + WN +I    
Sbjct: 26  EAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYA 85

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            NG ++ AI  + +M   G+  + ++    L +C+ L  I  G +IH      GL+SDV 
Sbjct: 86  WNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVF 145

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V  AL+  YA  G L    ++F  M   D V+WN++I A      L  +AV+  + M+  
Sbjct: 146 VCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMI-AGCSLYGLCDDAVQLIMQMQEE 204

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G  PN  T + +L                 Q + Y                         
Sbjct: 205 GICPNSSTIVGVLPTC--------------QCLLY------------------------A 226

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            KIF  M  R +EVSW++MI GY+ ++ + +A+++   M   G   D  T   VL AC+ 
Sbjct: 227 RKIFDVMGVR-NEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSH 285

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           +A L+ G   H   +      D +I +AL+DMYSKCG+I +A   F+ M   ++ SWN+M
Sbjct: 286 LAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAM 345

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I GY  HG G +AL LF  +   G  PD +TF+ +LS+CSH+GLV EG   F +MS+ + 
Sbjct: 346 IIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFS 405

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           ++P++E   CMVD+LGRAG +D+   FI  MP  P+  IW  +L A CR + +  ELG +
Sbjct: 406 IVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA-CRIH-KNIELGEE 463

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
            +  +  + P++  N+VLL+N+Y++ G+W+D A  R   K+  +KK  GCSW+ +   VH
Sbjct: 464 VSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVH 523

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
            FV GD+SH +   I  KL+EL  +M+  GY  +  F   D+E E KE ++ YHSEK+A+
Sbjct: 524 AFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAI 583

Query: 874 AF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           AF +L   +  PI + KNLRVCGDCH+A KF++ I  REI +RD+NRFHHF +G C+CGD
Sbjct: 584 AFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGD 643

Query: 933 YW 934
           +W
Sbjct: 644 FW 645



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 204/440 (46%), Gaps = 30/440 (6%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR 168
           ++H   LK+    D  V + L  +Y SC +    ARR+F+EI    +I WN II  Y+  
Sbjct: 29  KIHQHFLKNTSNADSSVLHKLTRLYLSCNQVV-LARRLFDEIPNPSVILWNQIIRAYAWN 87

Query: 169 GDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ---QILAMVKKA 225
           G       L+  M   G R    PN+YT+  ++ A      SG   ++   +I +  K  
Sbjct: 88  GPFDGAIDLYHSMLHLGVR----PNKYTYPFVLKAC-----SGLLAIEDGVEIHSHAKMF 138

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS 285
           GL SD++V +ALV  +A+ G    A+++F  M  ++VV+ N ++     G  ++G    +
Sbjct: 139 GLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMI----AGCSLYGLCDDA 194

Query: 286 GLFDMVAVGNGL-------VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
               M     G+       V +   C  +  +R +F  M  ++ VSW+ MI G   + C 
Sbjct: 195 VQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCM 254

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           +EA+  F  M+  G+     +++  L +C+ L  +  G   HG  +  G  +D  + NAL
Sbjct: 255 KEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNAL 314

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           + +Y+  G +S   +VF  M  HD VSWN++I  +     L  EA+  + D+   G  P+
Sbjct: 315 IDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYG-IHGLGMEALGLFHDLLALGLKPD 373

Query: 459 GVTFINILAAASSFSM---GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            +TFI +L++ S   +   G+L     ++        E  I   ++   G+ G +D+   
Sbjct: 374 DITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI--CMVDILGRAGLIDEAHH 431

Query: 516 IFARMSERRDEVSWNSMISG 535
               M    D   W++++S 
Sbjct: 432 FIRNMPFEPDVRIWSALLSA 451



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 175/389 (44%), Gaps = 34/389 (8%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           +AK  H   LK+    D  + + L  +Y+    +  A +LFDE+P+ + + W  I+  Y 
Sbjct: 26  EAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYA 85

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G  + A  ++  M+  G   N+Y    VL+AC   G    + G+++H          D
Sbjct: 86  WNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS--GLLAIEDGVEIHSHAKMFGLESD 143

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V   L+  Y  C    + A+R+F  +  RD+++WN++I+  S  G      +L  +MQ
Sbjct: 144 VFVCTALVDFYAKCGILVE-AQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQ 202

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKA----GLLSDLYVGSALV 238
            EG    + PN            SS + G     Q L   +K     G+ +++   SA++
Sbjct: 203 EEG----ICPN------------SSTIVGVLPTCQCLLYARKIFDVMGVRNEVS-WSAMI 245

Query: 239 SGFARLGNFYYARKIFEQM----IQKNVVSMNGLME------GRRKGKEVHGYLIRSGLF 288
            G+        A  IF  M    I  ++ +M G++         + G   HGYLI  G  
Sbjct: 246 GGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFA 305

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
               + N L++MY+KCG I  +R VF  M   D VSWN MI G   +G   EA+  F  +
Sbjct: 306 TDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDL 365

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
              GL   + + I  LSSC+  G +M G+
Sbjct: 366 LALGLKPDDITFICLLSSCSHSGLVMEGR 394



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 156/361 (43%), Gaps = 41/361 (11%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L +C     +   ++IH   LK   ++D SV + L  LY     +    ++F  +P    
Sbjct: 15  LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           + WN +I A+A +      A+  Y  M   G  PN  T+  +L A S     + G ++H+
Sbjct: 75  ILWNQIIRAYAWNGPF-DGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
               + + ++  +  AL+  Y KCG + + +++F+ MS  RD V+WN+MI+G     L  
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGCSLYGLCD 192

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
            A+ L+  M + G   +  T   VL  C  +                             
Sbjct: 193 DAVQLIMQMQEEGICPNSSTIVGVLPTCQCLL---------------------------- 224

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
                     YA + FD+M VRN  SW++MI GY       +AL +F  M+L G  PD  
Sbjct: 225 ----------YARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLT 274

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           T +GVL ACSH   +  GF     +  V G        + ++D+  + G++    E  N+
Sbjct: 275 TMLGVLPACSHLAALQHGFCSHGYLI-VRGFATDTLICNALIDMYSKCGKISFAREVFNR 333

Query: 724 M 724
           M
Sbjct: 334 M 334



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/393 (22%), Positives = 163/393 (41%), Gaps = 88/393 (22%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G   DVF+C  L++ Y + G L  A +LF  M  R+ V+W  +++G +  G+ ++A ++ 
Sbjct: 139 GLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLI 198

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
            +M   G   N   +  VL  CQ              CL+                    
Sbjct: 199 MQMQEEGICPNSSTIVGVLPTCQ--------------CLLY------------------- 225

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
                   AR+IF+ +  R+ +SW+++I  Y           +F  MQ  G    + P+ 
Sbjct: 226 --------ARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSG----IDPDL 273

Query: 195 YT-FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKI 253
            T  G L   ++ + L   +     L +    G  +D  + +AL+  +++ G   +AR++
Sbjct: 274 TTMLGVLPACSHLAALQHGFCSHGYLIV---RGFATDTLICNALIDMYSKCGKISFAREV 330

Query: 254 FEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS-GLF-DMVAVGNGLVNMYAKCGTIDDSR 311
           F +M + ++VS N ++     G  +HG  + + GLF D++A+G                 
Sbjct: 331 FNRMDRHDIVSWNAMI----IGYGIHGLGMEALGLFHDLLALG----------------- 369

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS-- 369
                 +  D +++  ++S    +G   E  + F AM RD      FS++  +  C    
Sbjct: 370 ------LKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRD------FSIVPRMEHCICMV 417

Query: 370 --LGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
             LG   L  + H     +  + DV + +ALLS
Sbjct: 418 DILGRAGLIDEAHHFIRNMPFEPDVRIWSALLS 450



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 2/178 (1%)

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
            +  +L AC    +L    ++H   ++     D  +   L  +Y  C ++  A R FD +
Sbjct: 10  NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
           P  +V  WN +I  YA +G  D A+ L+  M   G  P+  T+  VL ACS    +++G 
Sbjct: 70  PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC 740
           +   S ++++GL   +   + +VD   + G L + +   + M    + + W  ++  C
Sbjct: 130 E-IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS-HRDVVAWNAMIAGC 185


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 246/699 (35%), Positives = 380/699 (54%), Gaps = 44/699 (6%)

Query: 276 KEVHGYLIRSG-LFDMVAVGNGLVNM-YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           K++H  ++R+  L D  A         ++    +D +R VF  +   +  SWN +I  L 
Sbjct: 156 KQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALA 215

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            +    ++++ F  M  D     N F+    + + A     ++G+ +HG  +K     DV
Sbjct: 216 TSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDV 275

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMP--EHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
            V N+L+  YA  G+L     VF ++     D VSWNS++  F        +A+  +  M
Sbjct: 276 FVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQG-GYPDKALDLFERM 334

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
           R  G  PN VT +++++A +      LG +V   + +  +     + NA +  + KCGE+
Sbjct: 335 RNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEV 394

Query: 511 DDCEKIFARMSERRDEVSWNSMISGY-------IHNEL---LPKAMNLVWFMM------- 553
           +    +F  M E+RD VSW ++I GY       I  ++   +P+     W ++       
Sbjct: 395 EIARGLFDNM-EKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQS 453

Query: 554 ----------------QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
                           + G R D  T  + LSACA +  ++ G  +H    +  ++ +  
Sbjct: 454 GRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRN 513

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           + ++L+DMYSK G ++ A   F  +  ++V+ W++MI+G A HG G+ A+ LF  M+   
Sbjct: 514 LATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQ 573

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
             P+ VTF  +L ACSH+GLVDEG + F  M +VYG++P+ + +SCMVD+LGRAG L++ 
Sbjct: 574 VKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEA 633

Query: 718 EEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYA 777
            +FI  MP+ P++ +W  +LGACC       EL  KA + L E+EP N   YVLL+N+YA
Sbjct: 634 LKFIEGMPLAPSASVWGALLGACCIHG--NLELAEKACSRLLEIEPGNHGAYVLLSNLYA 691

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
             G WE V++ R+ M+++ +KKE GCS + +   VH F+ GD +HP    IY KL E+  
Sbjct: 692 KTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMA 751

Query: 838 KMRDAGYVPQTKFAL-FDLEPESKEDLVSYHSEKIAVAFVLTR-NSKLPIRIMKNLRVCG 895
           ++R  GYV  T   L F  E E KE  +  HSEK+A+AF L R +S+  IRI+KNLRVC 
Sbjct: 752 RLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADSQQAIRIVKNLRVCR 811

Query: 896 DCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           DCH+  K +SK+ GR+IVLRD  RFHHF+ G CSC DYW
Sbjct: 812 DCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 140/549 (25%), Positives = 255/549 (46%), Gaps = 48/549 (8%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINV--YVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           K  K  H Q+L+    +D +  + L     +     L  A K+FD++P  N  SW  ++ 
Sbjct: 153 KQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIR 212

Query: 60  GYTHKGMSNEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
                    ++  +F  M+  + F  N++    +++A  E     F  G  VH + +K++
Sbjct: 213 ALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAE--RRCFLVGKAVHGMAIKTS 270

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE--TRDLISWNSIISVYSQRGDTISVFK 176
              D  V N LI  Y SC    D A  +FE IE   +D++SWNS+++ + Q G       
Sbjct: 271 FGDDVFVLNSLIHFYASC-GHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALD 329

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
           LF RM+ EG    + PN  T  S+++A   ++     L +++   + +  ++ +L V +A
Sbjct: 330 LFERMRNEG----VHPNAVTMVSVMSACAKTM--NLTLGRKVCDYIDRNEMMMNLNVCNA 383

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
            +  F + G    AR +F+ M +++VVS   +++G                         
Sbjct: 384 TIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDG------------------------- 418

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF--CAMRRDGLM 354
               YAK      +R +F  M  KD  +WN +ISG +Q+G  +EA+  F    + + G  
Sbjct: 419 ----YAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGAR 474

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
               +L+STLS+CA LG + +G+ IHG   K  +  + +++ +L+ +Y+ +G + + ++V
Sbjct: 475 PDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEV 534

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  +   D   W+++I   A        A++ +LDM+     PN VTF N+L A S   +
Sbjct: 535 FHSIGNKDVFVWSAMIAGLA-MHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGL 593

Query: 475 GKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
              G ++  ++ + Y V  +T   + ++   G+ G +++  K    M        W +++
Sbjct: 594 VDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALL 653

Query: 534 SG-YIHNEL 541
               IH  L
Sbjct: 654 GACCIHGNL 662



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 126/515 (24%), Positives = 225/515 (43%), Gaps = 95/515 (18%)

Query: 215 LQQILAMVKKAGLLSDLYVGSAL--VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG- 271
           L+QI A + +   L D Y  S L   + F+      YARK+F+Q+ Q N+ S N L+   
Sbjct: 155 LKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRAL 214

Query: 272 --------------------------------------RR---KGKEVHGYLIRSGLFDM 290
                                                 RR    GK VHG  I++   D 
Sbjct: 215 ATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDD 274

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIG--KDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
           V V N L++ YA CG +D +  VF  + G  KD VSWN+M++G  Q G  ++A+  F  M
Sbjct: 275 VFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERM 334

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           R +G+  +  +++S +S+CA    + LG+++     +  +  +++V NA + ++   G +
Sbjct: 335 RNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEV 394

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFA------------DS---------EALVS------ 441
                +F  M + D VSW ++I  +A            DS           L+S      
Sbjct: 395 EIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSG 454

Query: 442 ---EAVKYY--LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
              EA+  +  L + ++G  P+ VT ++ L+A +      +G  +H  + K  +     +
Sbjct: 455 RPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNL 514

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
             +L+  Y K G+++   ++F  +   +D   W++MI+G   +     A+ L   M +  
Sbjct: 515 ATSLIDMYSKSGDVEKAIEVFHSIGN-KDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQ 573

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG--------SALVDMYSK 608
            + +  TF  +L AC+    ++ G        R   E + V G        S +VD+  +
Sbjct: 574 VKPNSVTFTNLLCACSHSGLVDEGK-------RLFDEMERVYGVVPKTKHYSCMVDVLGR 626

Query: 609 CGRIDYASRFFDLMPVRNVYS-WNSMISGYARHGH 642
            G ++ A +F + MP+    S W +++     HG+
Sbjct: 627 AGHLEEALKFIEGMPLAPSASVWGALLGACCIHGN 661



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 150/348 (43%), Gaps = 29/348 (8%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKE-- 76
           DV    T+I+ Y ++ +   A  +FD MP ++  +W  ++SGY   G   EA  +F+E  
Sbjct: 408 DVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQ 467

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
           + ++G   ++  L S L AC + G      G  +H  + K     +  ++  LI MY   
Sbjct: 468 LTKSGARPDQVTLLSTLSACAQLG--AMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKS 525

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
            +  + A  +F  I  +D+  W+++I+  +  G   +  +LF  MQ       +KPN  T
Sbjct: 526 GD-VEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQET----QVKPNSVT 580

Query: 197 FGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
           F +L+ A   S L   G  L  +   M +  G++      S +V    R G+   A K  
Sbjct: 581 FTNLLCACSHSGLVDEGKRLFDE---MERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFI 637

Query: 255 EQMIQKNVVSMNGLMEGRRKGKEVHGYL-----IRSGLFDMVAVGNG----LVNMYAKCG 305
           E M      S+ G + G      +HG L       S L ++    +G    L N+YAK G
Sbjct: 638 EGMPLAPSASVWGALLG---ACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTG 694

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM--NFCAMRRD 351
              +  S  R  +    +   T  S ++ +G   E I+  N   + RD
Sbjct: 695 DW-EGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRD 741


>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 950

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 252/717 (35%), Positives = 387/717 (53%), Gaps = 58/717 (8%)

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMV 291
           +S  +R+G    ARK F+ +  K + S N ++ G       R+ +++   +    +    
Sbjct: 24  ISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPERNIVSW- 82

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
              NGLV+ Y K   I+++R+VF  M  ++ VSW  M+ G  Q G   EA + F  M   
Sbjct: 83  ---NGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPER 139

Query: 352 GLMSSNFSLISTLSSCASLGW-IMLGQQIHGEGLK-------LGLDSDVSVSNALLSLYA 403
             +S                W +M G  I G  +        +    DV  S  ++    
Sbjct: 140 NEVS----------------WTVMFGGLIDGGRIDDARKLYDMMPGKDVVASTNMIGGLC 183

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM---RRAGWSPN-- 458
             G +    ++F  M E + ++W ++I  +  ++  V  A K +  M       W+    
Sbjct: 184 REGRVDEAREIFDEMRERNVITWTTMITGYGQNKR-VDVARKLFEVMPEKTEVSWTSMLL 242

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
           G T    +  A  F             +K  +A      NA++   G+ GE+    ++F 
Sbjct: 243 GYTLSGRIEDAEEF--------FEVMPMKPVIAC-----NAMIVALGEVGEIVKARRVFD 289

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
           +M E RD  +W  MI  Y       +A+ L   M ++G R    +  ++LS CA++A+L+
Sbjct: 290 QM-EDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQ 348

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
            G +VHA  VR   + DV + S L+ MY KCG +  A   FD  P +++  WNS+ISGYA
Sbjct: 349 YGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYA 408

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
            HG G++AL +F +M L G +P+ VT + +L+ACS+ G ++EG + F+SM   + + P +
Sbjct: 409 SHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTV 468

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
           E +SC VD+LGRAG++DK  E IN M I P++ +W  +LGAC      + +L   AA  L
Sbjct: 469 EHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGAC--KTHSRLDLAEVAAKKL 526

Query: 759 FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
           FE+EP+NA  Y+LL+++ AS  KW DVA+ RK M+   V K  GCSW+ +   VH+F  G
Sbjct: 527 FEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRG 586

Query: 819 D-ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL 877
              +HPE+ +I   L++ +  +R+AGY P     L D++ E K D +S HSE++AVA+ L
Sbjct: 587 GIRNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGL 646

Query: 878 TRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
            +  + +PIR+MKNLRVCGDCH+A K ISK+  REI+LRD+NRFHHFN+G+CSC DY
Sbjct: 647 LKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDY 703



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 138/560 (24%), Positives = 237/560 (42%), Gaps = 96/560 (17%)

Query: 11  ILKHGFAYDVFLCNTL-INVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           IL   ++    + N+  I+   R+G +  A K FD +  +   SW  IVSGY   G+  E
Sbjct: 7   ILHRAYSTSTGVNNSFEISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPRE 66

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
           A +MF EM                                    ++  N    G + N +
Sbjct: 67  ARQMFDEMPERN--------------------------------IVSWNGLVSGYIKNRM 94

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           I          + AR +FE +  R+++SW +++  Y Q G  +    LF RM        
Sbjct: 95  I----------EEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPER----- 139

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYL--LQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
              NE ++    T  +  ++ G  +   +++  M+       D+   + ++ G  R G  
Sbjct: 140 ---NEVSW----TVMFGGLIDGGRIDDARKLYDMMPG----KDVVASTNMIGGLCREGRV 188

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVH----------------------GYLIRS 285
             AR+IF++M ++NV++   ++ G  + K V                       GY +  
Sbjct: 189 DEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGYTLSG 248

Query: 286 GLFDM-----------VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            + D            V   N ++    + G I  +R VF  M  +D+ +W  MI   ++
Sbjct: 249 RIEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYER 308

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G   EA+  F  M+R G+  S  SLIS LS CA+L  +  G+Q+H   ++   D DV V
Sbjct: 309 KGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYV 368

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           ++ L+++Y   G L +   VF   P  D + WNS+I  +A S  L  EA+K + +M  +G
Sbjct: 369 ASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYA-SHGLGEEALKVFHEMPLSG 427

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQV-HAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
             PN VT I IL A S     + G ++  +   K+ V       +  +   G+ G++D  
Sbjct: 428 TMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKA 487

Query: 514 EKIFARMSERRDEVSWNSMI 533
            ++   M+ + D   W +++
Sbjct: 488 MELINSMTIKPDATVWGALL 507



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 114/470 (24%), Positives = 208/470 (44%), Gaps = 60/470 (12%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------GKEVHGYLIRSGLF 288
           +++VSG+   G    AR++F++M ++N+VS NGL+ G  K       + V   +    + 
Sbjct: 52  NSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVV 111

Query: 289 DMVAVGNGLVN------------------------MYAKC---GTIDDSRSVFRFMIGKD 321
              A+  G V                         M+      G IDD+R ++  M GKD
Sbjct: 112 SWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGKD 171

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF---------------SLISTLSS 366
            V+   MI GL + G  +EA   F  MR   +++                   L   +  
Sbjct: 172 VVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPE 231

Query: 367 CASLGW--IMLGQQIHG------EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
              + W  ++LG  + G      E  ++     V   NA++    + G + +  +VF  M
Sbjct: 232 KTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQM 291

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
            + D  +W  +I A+ + +    EA++ +  M+R G  P+  + I+IL+  ++ +  + G
Sbjct: 292 EDRDNATWRGMIKAY-ERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYG 350

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
            QVHA +++     +  + + L++ Y KCGE+   + +F R    +D + WNS+ISGY  
Sbjct: 351 RQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPS-KDIIMWNSIISGYAS 409

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV-HACGVRACLEFDVV 597
           + L  +A+ +   M   G   +  T   +L+AC+    LE G+E+  +   + C+   V 
Sbjct: 410 HGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVE 469

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKA 646
             S  VDM  + G++D A    + M ++ +   W +++     H   D A
Sbjct: 470 HYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLA 519



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 107/473 (22%), Positives = 199/473 (42%), Gaps = 79/473 (16%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM------ 77
           N++++ Y   G    A ++FDEMP+RN VSW  +VSGY    M  EA  +F+ M      
Sbjct: 52  NSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVV 111

Query: 78  ---------VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV 128
                    V+ G ++    L   +    E   +    G+     +  + + +D +    
Sbjct: 112 SWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGKD 171

Query: 129 LIA----MYGSCLES-TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           ++A    + G C E   D AR IF+E+  R++I+W ++I+ Y Q        KLF  M  
Sbjct: 172 VVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPE 231

Query: 184 EGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           +         E ++ S++     S  +  +    +++ M         +   +A++    
Sbjct: 232 K--------TEVSWTSMLLGYTLSGRIEDAEEFFEVMPM-------KPVIACNAMIVALG 276

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---------------------------- 274
            +G    AR++F+QM  ++  +  G+++   +                            
Sbjct: 277 EVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLIS 336

Query: 275 -------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                        G++VH +L+R      V V + L+ MY KCG +  ++ VF     KD
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKD 396

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI-H 380
            + WN++ISG   +G  EEA+  F  M   G M +  +LI+ L++C+  G +  G +I  
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFE 456

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
               K  +   V   +  + +   AG + + +++   M  + D   W +++GA
Sbjct: 457 SMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGA 509



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 54/93 (58%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +++  F  DV++ + L+ +YV+ G+L  A  +FD  P ++ + W  I+SGY   G+ 
Sbjct: 354 HAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLG 413

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            EA K+F EM  +G + N+  L ++L AC   G
Sbjct: 414 EEALKVFHEMPLSGTMPNKVTLIAILTACSYGG 446


>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 678

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 235/613 (38%), Positives = 351/613 (57%), Gaps = 9/613 (1%)

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           +NTMI G+     +  A+  + +M +  ++  +F+    L +CA L    LG  IH    
Sbjct: 72  YNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVF 131

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           K G D DV V   ++  Y+  G+L    KVF  M   + VSW  +I    +      EAV
Sbjct: 132 KTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKF-REAV 190

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
             +  +  +G  P+G   + +L A +     + G  +   + +  ++    +  +L+  Y
Sbjct: 191 DLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMY 250

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            KCG M++   +F  M E+ D V W++MI GY  N L  +A+ L + M +   R D +  
Sbjct: 251 TKCGSMEEARFVFDGMVEK-DIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAM 309

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEF--DVVIGSALVDMYSKCGRIDYASRFFDLM 622
              LS+CAS+  LE G    A G+    EF  + V+G++L+D Y+KCG ++ A   + +M
Sbjct: 310 VGALSSCASLGALELGN--WAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMM 367

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
             ++   +N++ISG A +G    A  +F QM   G  P+  TFVG+L  C+HAGLVD+G 
Sbjct: 368 KEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGR 427

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
            +F SMS  + + P +E + CMVDLL RAG LD+    I  MP+  N ++W ++LG  CR
Sbjct: 428 HYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGG-CR 486

Query: 743 ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
            + R+T+L       L E+EP N+ +YVLL+N+Y++  +W++  K R  + E  ++K  G
Sbjct: 487 LH-RETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPG 545

Query: 803 CSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKED 862
            SWV +   VH F+ GD SHP    IYEKL+ L + +++AGY P T+F LFD+E E KE 
Sbjct: 546 YSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKEH 605

Query: 863 LVSYHSEKIAVAFVL-TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFH 921
            +  HSEK+AVAF L +  +K  IR++KNLRVCGDCH A K ISK+ GREIV+RD+NRFH
Sbjct: 606 FLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRFH 665

Query: 922 HFNDGKCSCGDYW 934
            F+DG CSC DYW
Sbjct: 666 CFSDGACSCRDYW 678



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 193/443 (43%), Gaps = 37/443 (8%)

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGK 276
            + A + KA ++ D +  S ++   ARL  F+                          G 
Sbjct: 90  HLYASMHKAAIVPDSFTFSFVLKACARLNLFHL-------------------------GV 124

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
            +H  + ++G    V V   +V  Y+KCG + D+  VF  M+ K+ VSW  MI G  + G
Sbjct: 125 MIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFG 184

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
            + EA+  F  +   GL    F ++  L +CA LG +  G+ I     + GL  +V V+ 
Sbjct: 185 KFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVAT 244

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           +L+ +Y   G +     VF  M E D V W+++I  +A S  L  EA++ + +MR+    
Sbjct: 245 SLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYA-SNGLPREAIELFFEMRKVNVR 303

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P+    +  L++ +S    +LG+     +      +   +  +L+  Y KCG M++   +
Sbjct: 304 PDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGV 363

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           +  M E +D V +N++ISG      +  A  +   M + G   +  TF  +L  C     
Sbjct: 364 YKMMKE-KDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGL 422

Query: 577 LERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSW 630
           ++ G        H   V   +E        +VD+ ++ G +D A      MP++ NV  W
Sbjct: 423 VDDGRHYFNSMSHDFSVTPTIEHY----GCMVDLLARAGFLDEAHNLIKGMPMKANVIVW 478

Query: 631 NSMISGYARHGHGDKALTLFSQM 653
            S++ G   H     A  +  Q+
Sbjct: 479 GSLLGGCRLHRETQLAEHVLKQL 501



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 164/353 (46%), Gaps = 26/353 (7%)

Query: 6   LFHLQILKH------GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           LFHL ++ H      GF  DVF+   ++  Y + G L  A K+FD+M  +N VSW  ++ 
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMIC 178

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           G    G   EA  +F+ ++ +G   + + +  VLRAC   G    + G  +   + +   
Sbjct: 179 GCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGD--LESGRWIDRCMRECGL 236

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           + +  V+  L+ MY  C  S + AR +F+ +  +D++ W+++I  Y+  G      +LF 
Sbjct: 237 SRNVFVATSLVDMYTKC-GSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFF 295

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            M+    + +++P+ Y     +++  S  L    L      ++     LS+  +G++L+ 
Sbjct: 296 EMR----KVNVRPDCYAMVGALSSCAS--LGALELGNWAKGLMNYEEFLSNPVLGTSLID 349

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEV---HGYLIRSGLFDMVAVGNG 296
            +A+ G+   A  +++ M +K+ V  N ++ G     +V    G   + G F +    + 
Sbjct: 350 FYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHT 409

Query: 297 LVNMYAKC---GTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEA 341
            V +   C   G +DD R  F  M    SV+     +  M+  L + G  +EA
Sbjct: 410 FVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEA 462



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 115/250 (46%), Gaps = 7/250 (2%)

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F +     +   +N+MI G +  +    A++L   M +     D FTF+ VL ACA + 
Sbjct: 59  VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
               G+ +H+   +   + DV + + +V  YSKCG +  A + FD M V+NV SW  MI 
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMIC 178

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
           G    G   +A+ LF  +   G  PD    V VL AC+  G ++ G    + M +  GL 
Sbjct: 179 GCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMREC-GLS 237

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
             +   + +VD+  + G +++     + M +  + + W  ++            L R+A 
Sbjct: 238 RNVFVATSLVDMYTKCGSMEEARFVFDGM-VEKDIVCWSAMI-----QGYASNGLPREAI 291

Query: 756 NMLFEMEPQN 765
            + FEM   N
Sbjct: 292 ELFFEMRKVN 301


>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Brachypodium distachyon]
          Length = 631

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 225/592 (38%), Positives = 349/592 (58%), Gaps = 11/592 (1%)

Query: 349 RRDGLMSSNFSLISTLSS----CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           RR   +  N   +S +S     CA    +++G+  HG  +  GL +D    N L++LY  
Sbjct: 45  RRLARIDRNLIDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTK 104

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
            G       VF +M     VSWN++I  +  S   V +A+K +  M R G   +  T  +
Sbjct: 105 CGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDV-QALKLFSRMHREGTHMSEFTLSS 163

Query: 465 -ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
            I A A+ +++ +   Q+H   +K  + + + +  A+L  Y KC  + D   +F +M ER
Sbjct: 164 TICACAAKYAINECK-QLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPER 222

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
              V+W+S+ +GY+ N L  +A++L     + G  L  FT + +LSACAS+A    G+++
Sbjct: 223 -TLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQL 281

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           HA  ++     +  + ++LVD+Y++CG+I+ A   F  M  +NV  WN+MI+ ++RH H 
Sbjct: 282 HAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHS 341

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC 703
            +A+ LF +M+  G  P+ VT++ VLS CSHAGLV++G  +F  +     + P +  +SC
Sbjct: 342 WEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSC 401

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP 763
           MVD+LGR+G+ D+  E +NKMP  P + +W ++LG+C   N     L R AA  LF++EP
Sbjct: 402 MVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSC--RNYNNIRLARIAAEQLFQLEP 459

Query: 764 QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHP 823
            N  N+VLL+N+YA+ G WE+V  ARK +K++  KKE G SW+  K  VHVFV G+  HP
Sbjct: 460 DNGGNHVLLSNVYAASGNWENVLMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHP 519

Query: 824 EKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSK 882
               IY KL+E+  +MR        +  L D+  E KE+L+ +HSEK+A++F +++  S 
Sbjct: 520 RITDIYNKLEEIYHEMRKFARRTSIECDLHDVHAEQKEELLKHHSEKLALSFGLISLPSN 579

Query: 883 LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +PI I KNLR+CGDCHS  K  + I  R +++RD+NRFHHF DG CSCGD+W
Sbjct: 580 IPIIIHKNLRICGDCHSFMKIAAHITERLVIVRDTNRFHHFKDGSCSCGDFW 631



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 194/389 (49%), Gaps = 8/389 (2%)

Query: 252 KIFEQMIQKNVVSMNGLMEGRRK----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
           +I   +I  + +S    +  +RK    GK  HG  I  GL       N L+N+Y KCG  
Sbjct: 49  RIDRNLIDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRN 108

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
           D +R VF  M  +  VSWNTMI+G   +G   +A+  F  M R+G   S F+L ST+ +C
Sbjct: 109 DCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICAC 168

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
           A+   I   +Q+H   LKL LDS+  V  A+L +YA    +     VF  MPE   V+W+
Sbjct: 169 AAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWS 228

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           S+   +  +  L  EA+  +   +R G      T   IL+A +S ++   G Q+HA ++K
Sbjct: 229 SLFAGYVQN-GLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILK 287

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
                   +  +L+  Y +CG+++    +FA M E ++ V WN+MI+ +  +    +AM 
Sbjct: 288 CGFHGNFFVAASLVDVYARCGQIEKAYALFAYM-EHKNVVIWNAMIASFSRHAHSWEAMI 346

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR-ACLEFDVVIGSALVDMY 606
           L   M Q G   +  T+ +VLS C+    +E+G    +  +    +E +V+  S +VD+ 
Sbjct: 347 LFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVL 406

Query: 607 SKCGRIDYASRFFDLMPVRNVYS-WNSMI 634
            + G+ D A    + MP     S W S++
Sbjct: 407 GRSGKTDEAWELLNKMPFEPTASMWGSLL 435



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 184/404 (45%), Gaps = 26/404 (6%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G   D   CN LIN+Y + G    A  +FD M  R+ VSW  +++GYTH G   +A K+F
Sbjct: 87  GLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLF 146

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
             M R G  ++ + L S + AC            Q+H + LK     +  V   ++ +Y 
Sbjct: 147 SRMHREGTHMSEFTLSSTICACA--AKYAINECKQLHTIALKLALDSNSFVGTAILDVYA 204

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
            C    D A  +FE++  R L++W+S+ + Y Q G       LF   QREG    ++  E
Sbjct: 205 KCNMIKD-ACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREG----VELTE 259

Query: 195 YTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
           +T  ++++A  S  L    +  Q+ A++ K G   + +V ++LV  +AR G    A  +F
Sbjct: 260 FTLSAILSACASLALKIEGI--QLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALF 317

Query: 255 EQMIQKNVVSMNGLMEGRRKGKEVHGYLI------RSGLFDMVAVGNGLVNMYAKCGTID 308
             M  KNVV  N ++    +       +I      + G+F        ++++ +  G ++
Sbjct: 318 AYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVE 377

Query: 309 DSRSVFRFMIGKDSVSWNT-----MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
             R  F  ++   +V  N      M+  L ++G  +EA      M  +   S   SL   
Sbjct: 378 KGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSL--- 434

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAG 406
           L SC +   I L  +I  E L   L+ D   ++ LLS +YA +G
Sbjct: 435 LGSCRNYNNIRLA-RIAAEQL-FQLEPDNGGNHVLLSNVYAASG 476



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 105/201 (52%), Gaps = 9/201 (4%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H   LK     + F+   +++VY +   +  A  +F++MP+R  V+W+ + +GY 
Sbjct: 176 ECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYV 235

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKF-GMQVHCLVLKSNQTF 121
             G+  EA  +F+   R G  L  + L ++L A   C     K  G+Q+H ++LK     
Sbjct: 236 QNGLHEEALHLFRCAQREGVELTEFTLSAILSA---CASLALKIEGIQLHAVILKCGFHG 292

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V+  L+ +Y  C +  + A  +F  +E ++++ WN++I+ +S+   +     LF +M
Sbjct: 293 NFFVAASLVDVYARCGQ-IEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKM 351

Query: 182 QREGFRYSLKPNEYTFGSLIT 202
           Q+ G    + PNE T+ S+++
Sbjct: 352 QQLG----IFPNEVTYLSVLS 368


>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
          Length = 787

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 223/581 (38%), Positives = 339/581 (58%), Gaps = 8/581 (1%)

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
           S+ F+L   LS+CA LG +  G+ +       G   DV V ++LL LYA  G +   +KV
Sbjct: 108 STTFTL--ALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKV 165

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  MP  D+V+W++++  F  S     +A++ Y  MR  G   + V  I ++ A ++   
Sbjct: 166 FVRMPRRDRVTWSTMVAGFV-SAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARN 224

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            ++G  VH  ++++ +  +     +L+  Y K G +D   ++F  M  R D VSW++MIS
Sbjct: 225 VRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRND-VSWSAMIS 283

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           G+  N    +A+ L   M   G + D     + L AC+++  L+ G  VH   VR   +F
Sbjct: 284 GFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDF 342

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           + ++G+A +DMYSKCG +  A   F+++  R++  WN+MI+    HG G  ALTLF +M 
Sbjct: 343 NCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMN 402

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
             G  PDH TF  +LSA SH+GLV+EG   F  M   + + P  + + C+VDLL R+G +
Sbjct: 403 ETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLV 462

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
           ++  + +  M   P   IW  +L  C   N +K ELG   A+ + E++P +     L++N
Sbjct: 463 EEASDLLTSMKAEPTVAIWVALLSGCL--NNKKLELGESIADNILELQPDDVGVLALVSN 520

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           +YA+  KW+ V + RK MK++  KK  GCS + ++   HVFV  D+SHP+++ I  K+ +
Sbjct: 521 LYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAK 580

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRV 893
           L+ +MR  GY+P+T+F   DLE E KE  +SYHSE++A+AF +L       + I+KNLRV
Sbjct: 581 LDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRV 640

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CGDCH A K+ISKI  REIV+RD+ RFHHF DG CSC DYW
Sbjct: 641 CGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 182/369 (49%), Gaps = 11/369 (2%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R G+ V      +G  D V V + L+++YA+ G + D+  VF  M  +D V+W+TM++G 
Sbjct: 125 RGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGF 184

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
              G   +AI  +  MR DG+      +I  + +C +   + +G  +HG  L+ G+  DV
Sbjct: 185 VSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDV 244

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
             + +L+ +YA  G L    +VF LM   + VSW+++I  FA +     EA++ + +M+ 
Sbjct: 245 VTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQN-GQSDEALRLFRNMQA 303

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           +G  P+    ++ L A S+    KLG  VH  +++    N   +  A +  Y KCG +  
Sbjct: 304 SGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDFN-CILGTAAIDMYSKCGSLAS 362

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
            + +F  +S+ RD + WN+MI+    +     A+ L   M + G R DH TFA++LSA +
Sbjct: 363 AQMLFNMISD-RDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALS 421

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSA----LVDMYSKCGRIDYASRFFDLMPVR-NV 627
               +E G        R    F +         LVD+ ++ G ++ AS     M     V
Sbjct: 422 HSGLVEEGKLWFG---RMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTV 478

Query: 628 YSWNSMISG 636
             W +++SG
Sbjct: 479 AIWVALLSG 487



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 193/423 (45%), Gaps = 57/423 (13%)

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVK 223
           +S+RG   S  ++F          + +P+  TF   ++A A    L G    + +     
Sbjct: 84  HSRRGSPASALRVF-----RALPPAARPDSTTFTLALSACARLGDLRGG---ESVRDRAF 135

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG------------ 271
            AG   D++V S+L+  +AR G    A K+F +M +++ V+ + ++ G            
Sbjct: 136 DAGYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQ 195

Query: 272 -----------------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
                                         R G  VHG+L+R G+   V     LV+MYA
Sbjct: 196 MYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYA 255

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIS 362
           K G +D +  VF  M+ ++ VSW+ MISG  QNG  +EA+  F  M+  G+   + +L+S
Sbjct: 256 KNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVS 315

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
            L +C+++G++ LG+ +HG  ++   D +  +  A + +Y+  G L+    +F ++ + D
Sbjct: 316 ALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRD 374

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM---GKLGH 479
            + WN++I A   +     +A+  + +M   G  P+  TF ++L+A S   +   GKL  
Sbjct: 375 LILWNAMI-ACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWF 433

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
                  K   A +  +   L+    + G +++   +   M        W +++SG ++N
Sbjct: 434 GRMVNHFKITPAEKHYV--CLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNN 491

Query: 540 ELL 542
           + L
Sbjct: 492 KKL 494



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 109/470 (23%), Positives = 211/470 (44%), Gaps = 40/470 (8%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G+  DVF+C++L+++Y R G +  A K+F  MP R+ V+W+ +V+G+   G   +A +M+
Sbjct: 138 GYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMY 197

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
           + M   G   +   +  V++AC        + G  VH  +L+     D + +  L+ MY 
Sbjct: 198 RRMREDGVKGDEVVMIGVIQACTAA--RNVRMGASVHGHLLRHGMRMDVVTATSLVDMYA 255

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
                 D A R+F  +  R+ +SW+++IS ++Q G +    +LF  MQ  G    ++P+ 
Sbjct: 256 KN-GLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASG----IQPDS 310

Query: 195 YTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
              G+L++A  +    G   L + +          +  +G+A +  +++ G+   A+ +F
Sbjct: 311 ---GALVSALLACSNIGFLKLGRSVHGFIVRRFDFNCILGTAAIDMYSKCGSLASAQMLF 367

Query: 255 EQMIQKNVVSMNGLM-----EGR-RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
             +  ++++  N ++      GR +    +   +  +G+    A    L++  +  G ++
Sbjct: 368 NMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVE 427

Query: 309 D-----SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           +      R V  F I      +  ++  L ++G  EEA     +M+ +  ++   +L   
Sbjct: 428 EGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVAL--- 484

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL------ 417
           LS C +   + LG+ I    L+L  D DV V   + +LYA      +  +V  L      
Sbjct: 485 LSGCLNNKKLELGESIADNILELQPD-DVGVLALVSNLYAATKKWDKVRQVRKLMKDSGS 543

Query: 418 --MPEHDQVSWNSVIGAF-------ADSEALVSEAVKYYLDMRRAGWSPN 458
             MP    +        F          E +VS+  K  L+MR+ G+ P 
Sbjct: 544 KKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPR 593



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 148/324 (45%), Gaps = 19/324 (5%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +L+HG   DV    +L+++Y + G L  A ++F  M  RN VSW+ ++SG+   G S
Sbjct: 232 HGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQS 291

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           +EA ++F+ M  +G   +  AL S L AC   G    K G  VH  +++    F+ ++  
Sbjct: 292 DEALRLFRNMQASGIQPDSGALVSALLACSNIG--FLKLGRSVHGFIVRRFD-FNCILGT 348

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
             I MY  C  S   A+ +F  I  RDLI WN++I+     G       LF  M   G R
Sbjct: 349 AAIDMYSKC-GSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMR 407

Query: 188 YSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
               P+  TF SL++A ++S ++    L    +    K       YV   LV   AR G 
Sbjct: 408 ----PDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYV--CLVDLLARSGL 461

Query: 247 FYYARKIFEQMIQKNVVSM-NGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNGLV----NM 300
              A  +   M  +  V++   L+ G    K++  G  I   + ++     G++    N+
Sbjct: 462 VEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNL 521

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVS 324
           YA     D  R V + M  KDS S
Sbjct: 522 YAATKKWDKVRQVRKLM--KDSGS 543



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 95/414 (22%), Positives = 184/414 (44%), Gaps = 51/414 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASA-SKLFDEMPDRNSVSWACIVSGYT 62
           A+L  L I+    ++   L ++L   Y R GDLA+A S L       +  +W  I++ ++
Sbjct: 28  ARLHALLIVSSSASHT--LISSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHS 85

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
            +G    A ++F+ +  A    +       L AC   G    + G  V      +    D
Sbjct: 86  RRGSPASALRVFRALPPAA-RPDSTTFTLALSACARLG--DLRGGESVRDRAFDAGYKDD 142

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V + L+ +Y       D A ++F  +  RD ++W+++++ +   G  +   +++ RM+
Sbjct: 143 VFVCSSLLHLYARWGAMGD-AVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMR 201

Query: 183 REGFRYSLKPNEYTFGSLI---TAAYSSVLSGS---YLLQQILAM-VKKAGLLSDLYVG- 234
            +G    +K +E     +I   TAA +  +  S   +LL+  + M V  A  L D+Y   
Sbjct: 202 EDG----VKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKN 257

Query: 235 ---------------------SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR- 272
                                SA++SGFA+ G    A ++F  M    +   +G +    
Sbjct: 258 GLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSAL 317

Query: 273 ---------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                    + G+ VHG+++R   F+ + +G   ++MY+KCG++  ++ +F  +  +D +
Sbjct: 318 LACSNIGFLKLGRSVHGFIVRRFDFNCI-LGTAAIDMYSKCGSLASAQMLFNMISDRDLI 376

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
            WN MI+    +G  ++A+  F  M   G+   + +  S LS+ +  G +  G+
Sbjct: 377 LWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGK 430


>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/580 (37%), Positives = 348/580 (60%), Gaps = 13/580 (2%)

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
            I  L  CA  G +M  +  HG+ +++ L  DV++SN L++ Y+  G++    +VF  M 
Sbjct: 66  FIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGML 125

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
           E   VSWN++IG +  +  + SEA+  + +MR  G+  +  T  ++L+A  +        
Sbjct: 126 ERSLVSWNTMIGLYTRNR-MESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECK 184

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           ++H   +K ++     +  ALL  Y KCG ++D  ++F  M ++   V+W+SM++GY+ +
Sbjct: 185 KLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDK-SSVTWSSMVAGYVQS 243

Query: 540 ELLPKAMNLVWFMMQRGQRL----DHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
           +   +A+     + +R QR+    + FT ++V+ AC+++A L  G ++HA   ++    +
Sbjct: 244 KNYEEAL----LLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSN 299

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
           V + S+ VDMY+KCG +  +   F  +  +N+  WN++ISG+A+H    + + LF +M+ 
Sbjct: 300 VFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQ 359

Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD 715
           DG  P+ VTF  +LS C H GLV+EG + FK M   YGL P +  +SCMVD+LGRAG L 
Sbjct: 360 DGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLS 419

Query: 716 KIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANM 775
           +  E I  +P  P + IW ++L +C    C+  EL   AA  LFE+EP+NA N+VLL+N+
Sbjct: 420 EAYELIKSIPFEPTASIWGSLLASC--RVCKNLELAEVAAKKLFELEPENAGNHVLLSNI 477

Query: 776 YASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKEL 835
           YA+  +WE++AK+RK +++ +VKK  G SW+ +KD VH+F  G+ SHP    I   L  L
Sbjct: 478 YAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNL 537

Query: 836 NQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVC 894
             ++R  GY P  +  L D+E   KE+L+  HSEK+A+ F ++       +RIMKNLR+C
Sbjct: 538 VIELRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPEGSTVRIMKNLRIC 597

Query: 895 GDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            DCH   K  S    R I++RD+NRFHHF+DG CSCG++W
Sbjct: 598 VDCHEFMKAASMATRRFIIVRDANRFHHFSDGHCSCGEFW 637



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 182/366 (49%), Gaps = 6/366 (1%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           + K  HG  +R  L   V + N L+N Y+KCG ++ +R VF  M+ +  VSWNTMI    
Sbjct: 81  EAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT 140

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           +N    EA+  F  MR +G   S F++ S LS+C +    +  +++H   +K  LD ++ 
Sbjct: 141 RNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLY 200

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V  ALL LYA  G ++  ++VF  M +   V+W+S++  +  S+    EA+  Y   +R 
Sbjct: 201 VGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKN-YEEALLLYRRAQRM 259

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
               N  T  +++ A S+ +    G Q+HA + K    +   + ++ +  Y KCG + + 
Sbjct: 260 SLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRES 319

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
             IF+ + E+  E+ WN++ISG+  +    + M L   M Q G   +  TF+++LS C  
Sbjct: 320 YIIFSEVQEKNIEL-WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGH 378

Query: 574 VATLERGMEVHACGVRAC--LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-W 630
              +E G       +R    L  +VV  S +VD+  + G +  A      +P     S W
Sbjct: 379 TGLVEEGRRFFKL-MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIW 437

Query: 631 NSMISG 636
            S+++ 
Sbjct: 438 GSLLAS 443



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 176/351 (50%), Gaps = 22/351 (6%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           +AK  H + ++     DV L N LIN Y + G +  A ++FD M +R+ VSW  ++  YT
Sbjct: 81  EAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT 140

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRAC-QECGPSGFKFGMQVHCLVLKSNQTF 121
              M +EA  +F EM   GF  + + + SVL AC   C     K   ++HCL +K++   
Sbjct: 141 RNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECK---KLHCLSMKTSLDL 197

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V   L+ +Y  C    D A ++FE ++ +  ++W+S+++ Y Q  +      L+ R 
Sbjct: 198 NLYVGTALLDLYAKCGMIND-AVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRA 256

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           Q    R SL+ N++T  S+I A   S L+     +Q+ A+++K+G  S+++V S+ V  +
Sbjct: 257 Q----RMSLEQNQFTLSSVICAC--SNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMY 310

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLI------RSGLFDMVAVGN 295
           A+ G+   +  IF ++ +KN+   N ++ G  K       +I      + G+       +
Sbjct: 311 AKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFS 370

Query: 296 GLVNMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA 341
            L+++    G +++ R  F+ M     +  + V ++ M+  L + G   EA
Sbjct: 371 SLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 421



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 164/339 (48%), Gaps = 43/339 (12%)

Query: 171 TISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQIL-AMVKKAGLLS 229
            ISVF  + + +    RYS + N       I        +G+ +  +       +  L  
Sbjct: 37  NISVFASYEQEELSPGRYSDEFNVVQASDFIEILQLCARNGAVMEAKACHGKTMRMELQG 96

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM-----------------EGR 272
           D+ + + L++ +++ G    AR++F+ M+++++VS N ++                 E R
Sbjct: 97  DVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMR 156

Query: 273 RKG------------------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
            +G                        K++H   +++ L   + VG  L+++YAKCG I+
Sbjct: 157 NEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMIN 216

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
           D+  VF  M  K SV+W++M++G  Q+  YEEA++ +   +R  L  + F+L S + +C+
Sbjct: 217 DAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 276

Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
           +L  ++ G+Q+H    K G  S+V V+++ + +YA  G L     +F  + E +   WN+
Sbjct: 277 NLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNT 336

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +I  FA   A   E +  +  M++ G  PN VTF ++L+
Sbjct: 337 IISGFA-KHARPKEVMILFEKMQQDGMHPNEVTFSSLLS 374



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 20/230 (8%)

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT------FATVL 568
           KI  R S         S+ + Y   EL P            G+  D F       F  +L
Sbjct: 23  KILPRRSNTSSLSRNISVFASYEQEELSP------------GRYSDEFNVVQASDFIEIL 70

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
             CA    +      H   +R  L+ DV + + L++ YSKCG ++ A + FD M  R++ 
Sbjct: 71  QLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLV 130

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           SWN+MI  Y R+    +AL +F +M+ +G      T   VLSAC  A       K    +
Sbjct: 131 SWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACG-ANCDALECKKLHCL 189

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
           S    L   L   + ++DL  + G ++   +    M    +S+ W +++ 
Sbjct: 190 SMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQ-DKSSVTWSSMVA 238


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 235/662 (35%), Positives = 386/662 (58%), Gaps = 9/662 (1%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           + VH  +I+SG F    +G+ L++ Y KCG++ ++R +F  +  +  V+WN+MIS    +
Sbjct: 21  RAVHTNVIKSG-FSYSFLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISH 79

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS-DVSV 394
           G  +EA+  +  M  +G++   ++  +   + + LG I  GQ+ HG  + LGL+  D  V
Sbjct: 80  GKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFV 139

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           ++AL+ +YA    +     VF  + E D V + ++I  +A    L  EA+K + DM   G
Sbjct: 140 ASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQ-HGLDGEALKIFEDMVNRG 198

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             PN  T   IL    +      G  +H  V+K  + +    + +LL+ Y +C  ++D  
Sbjct: 199 VKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSI 258

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           K+F ++ +  ++V+W S + G + N     A+++   M++     + FT +++L AC+S+
Sbjct: 259 KVFNQL-DYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSL 317

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
           A LE G ++HA  ++  L+ +   G+AL+++Y KCG +D A   FD++   +V + NSMI
Sbjct: 318 AMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMI 377

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
             YA++G G +AL LF ++K  G +P+ VTF+ +L AC++AGLV+EG + F S+   + +
Sbjct: 378 YAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNI 437

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
              ++ F+CM+DLLGR+  L++    I ++   P+ ++WRT+L +C      + E+  K 
Sbjct: 438 ELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWRTLLNSCKIHG--EVEMAEKV 494

Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
            + + E+ P +   ++LL N+YAS GKW  V + +  +++ ++KK    SWV +   VH 
Sbjct: 495 MSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHT 554

Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVA 874
           F+AGD SHP    I+E L  L +K++  GY P T+F L DL+ E K   + YHSEK+A+A
Sbjct: 555 FMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQDLDEEKKISSLYYHSEKLAIA 614

Query: 875 FVL--TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           + L  T      IRI KNLRVCGDCHS  KF+S + GR+I+ RDS RFHHF  G CSC D
Sbjct: 615 YALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDSKRFHHFKGGLCSCKD 674

Query: 933 YW 934
           YW
Sbjct: 675 YW 676



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 243/476 (51%), Gaps = 54/476 (11%)

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
           VH  V+KS  ++   + + LI  Y  C  S   AR++F+E+ +R +++WNS+IS +   G
Sbjct: 23  VHTNVIKSGFSYS-FLGHKLIDGYIKC-GSLAEARKLFDELPSRHIVTWNSMISSHISHG 80

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS--------------SVLSGSYLL 215
            +    + +  M  EG    + P+ YTF S I+ A+S              +V+ G  +L
Sbjct: 81  KSKEAVEFYGNMLMEG----VLPDAYTF-SAISKAFSQLGLIRHGQRAHGLAVVLGLEVL 135

Query: 216 QQILA-----------------MVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
              +A                 +V +  L  D+ + +AL+ G+A+ G    A KIFE M+
Sbjct: 136 DGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMV 195

Query: 259 QKNV---------VSMN-GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
            + V         + +N G +     G+ +HG +++SGL  +VA    L+ MY++C  I+
Sbjct: 196 NRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIE 255

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
           DS  VF  +   + V+W + + GL QNG  E A+  F  M R  +  + F+L S L +C+
Sbjct: 256 DSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACS 315

Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
           SL  + +G+QIH   +KLGLD +     AL++LY   G + +   VF ++ E D V+ NS
Sbjct: 316 SLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINS 375

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
           +I A+A +     EA++ +  ++  G  PNGVTFI+IL A ++  + + G Q+ A  I+ 
Sbjct: 376 MIYAYAQN-GFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFAS-IRN 433

Query: 489 NVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI-SGYIHNEL 541
           N   E TI++   ++   G+   +++   +   +    D V W +++ S  IH E+
Sbjct: 434 NHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEV-RNPDVVLWRTLLNSCKIHGEV 488



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 199/416 (47%), Gaps = 56/416 (13%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K GF+Y  FL + LI+ Y++ G LA A KLFDE+P R+ V+W  ++S +   G S
Sbjct: 24  HTNVIKSGFSYS-FLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGKS 82

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCL-VLKSNQTFDGLVS 126
            EA + +  M+  G L + Y   ++ +A  + G    + G + H L V+   +  DG V+
Sbjct: 83  KEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGL--IRHGQRAHGLAVVLGLEVLDGFVA 140

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L+ MY    +  D A  +F  +  +D++ + ++I  Y+Q G      K+F  M   G 
Sbjct: 141 SALVDMYAKFDKMRD-AHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRG- 198

Query: 187 RYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
              +KPNEYT   ++        +++G    Q I  +V K+GL S +   ++L++ ++R 
Sbjct: 199 ---VKPNEYTLACILINCGNLGDLVNG----QLIHGLVVKSGLESVVASQTSLLTMYSRC 251

Query: 245 GNFYYARKIFEQMIQKNVVSMN----GLMEGRRK-------------------------- 274
                + K+F Q+   N V+      GL++  R+                          
Sbjct: 252 NMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSIL 311

Query: 275 -----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      G+++H   ++ GL      G  L+N+Y KCG +D +RSVF  +   D V
Sbjct: 312 QACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVV 371

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           + N+MI    QNG   EA+  F  ++  GL+ +  + IS L +C + G +  G QI
Sbjct: 372 AINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQI 427



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 7/201 (3%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +L H  ++K G    V    +L+ +Y R   +  + K+F+++   N V+W   V G  
Sbjct: 221 NGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLV 280

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G    A  +F+EM+R     N + L S+L+AC        + G Q+H + +K     +
Sbjct: 281 QNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAM--LEVGEQIHAITMKLGLDGN 338

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
                 LI +YG C  + D AR +F+ +   D+++ NS+I  Y+Q G      +LF R++
Sbjct: 339 KYAGAALINLYGKC-GNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLK 397

Query: 183 REGFRYSLKPNEYTFGSLITA 203
             G    L PN  TF S++ A
Sbjct: 398 NMG----LVPNGVTFISILLA 414


>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 627

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/609 (37%), Positives = 349/609 (57%), Gaps = 10/609 (1%)

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           IS L  NG  +EA++    +   G         + L++C     +  GQ++H   +K   
Sbjct: 26  ISQLCSNGRLQEALLEMVML---GPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRY 82

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
                +   LL  Y     L    KV   MPE + VSW ++I  ++ +    SEA+  + 
Sbjct: 83  LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT-GHSSEALSVFA 141

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
           +M R+   PN  TF  +L +    S   LG Q+H  ++K+N  +   + ++LL  Y K G
Sbjct: 142 EMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAG 201

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
           ++++  +IF  + ER D VS  ++I+GY    L  +A+ +   +   G R ++ T+A++L
Sbjct: 202 QIEEAREIFECLPER-DVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLL 260

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
           +A + +A L+ G + H   +R  L F  V+ ++L+DMYSKCG + YA R FD MP R   
Sbjct: 261 TALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAI 320

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKS 687
           SWN+M+ GY++HG G + L LF  M+ +  + PD VT + VLS CSH  + D G   +  
Sbjct: 321 SWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDG 380

Query: 688 M-SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
           M +  YG+ P  E + C+VD+LGRAG +D+  EFI +MP  P + +  ++LGAC R +  
Sbjct: 381 MVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGAC-RVHL- 438

Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
             ++G    + L E+EP+NA NYV+L+N+YAS G+WEDV   R  M +  V KE G SW+
Sbjct: 439 SVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWI 498

Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSY 866
             +  +H F A D +HP ++ +  K+KE++ KM+ AGYVP     L+D++ E KE ++  
Sbjct: 499 QHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDISCVLYDVDEEQKEKMLLG 558

Query: 867 HSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFND 925
           HSEK+A+ F ++T    +PIR+ KNLR+C DCH+  K  SK+  RE+ LRD NRFH    
Sbjct: 559 HSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVK 618

Query: 926 GKCSCGDYW 934
           G CSCGDYW
Sbjct: 619 GICSCGDYW 627



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 185/366 (50%), Gaps = 7/366 (1%)

Query: 265 MNGLMEGR--RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
           +N  ++ R  R+G+ VH ++I++       +   L+  Y KC  ++D+R V   M  K+ 
Sbjct: 58  LNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 117

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           VSW  MIS   Q G   EA+  F  M R     + F+  + L+SC     + LG+QIHG 
Sbjct: 118 VSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGL 177

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            +K   DS + V ++LL +YA AG +    ++F  +PE D VS  ++I  +A    L  E
Sbjct: 178 IVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQL-GLDEE 236

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           A++ +  ++  G  PN VT+ ++L A S  ++   G Q H  V++  +     ++N+L+ 
Sbjct: 237 ALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 296

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM-QRGQRLDH 561
            Y KCG +   +++F  M E R  +SWN+M+ GY  + L  + + L   M  ++  + D 
Sbjct: 297 MYSKCGNLSYAQRLFDNMPE-RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDA 355

Query: 562 FTFATVLSACASVATLERGMEVHACGVRA--CLEFDVVIGSALVDMYSKCGRIDYASRFF 619
            T   VLS C+     + G+ ++   V     ++ D      +VDM  + GRID A  F 
Sbjct: 356 VTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFI 415

Query: 620 DLMPVR 625
             MP +
Sbjct: 416 KRMPSK 421



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 149/283 (52%), Gaps = 18/283 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H  ++K  +    +L   L+  Y +   L  A K+ DEMP++N VSW  ++S Y
Sbjct: 68  REGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRY 127

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G S+EA  +F EM+R+    N +   +VL +C     SG   G Q+H L++K N   
Sbjct: 128 SQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRA--SGLALGKQIHGLIVKWNYDS 185

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V + L+ MY    +  + AR IFE +  RD++S  +II+ Y+Q G      ++F R+
Sbjct: 186 HIFVGSSLLDMYAKAGQIEE-AREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRL 244

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL---QQILAMVKKAGLLSDLYVGSALV 238
           Q EG R    PN  T+ SL+TA     LSG  LL   +Q    V +  L     + ++L+
Sbjct: 245 QSEGMR----PNYVTYASLLTA-----LSGLALLDHGKQAHCHVLRRELPFYAVLQNSLI 295

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---GKEV 278
             +++ GN  YA+++F+ M ++  +S N ++ G  K   G+EV
Sbjct: 296 DMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREV 338



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 148/326 (45%), Gaps = 18/326 (5%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  I+K  +   +F+ ++L+++Y + G +  A ++F+ +P+R+ VS   I++GY  
Sbjct: 171 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQ 230

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+  EA +MF+ +   G   N     S+L A    G +    G Q HC VL+    F  
Sbjct: 231 LGLDEEALEMFQRLQSEGMRPNYVTYASLLTALS--GLALLDHGKQAHCHVLRRELPFYA 288

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           ++ N LI MY  C  +   A+R+F+ +  R  ISWN+++  YS+ G    V +LF  M+ 
Sbjct: 289 VLQNSLIDMYSKC-GNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRD 347

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           E     +KP+  T  ++++      +  + L      +  + G+  D      +V    R
Sbjct: 348 EK---RVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGR 404

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVH-----GYLIRSGLFDMVAVGNG-- 296
            G    A +  ++M  K    + G + G      VH     G  +   L ++     G  
Sbjct: 405 AGRIDEAFEFIKRMPSKPTAGVLGSLLG---ACRVHLSVDIGEYVGHRLIEIEPENAGNY 461

Query: 297 --LVNMYAKCGTIDDSRSVFRFMIGK 320
             L N+YA  G  +D  +V   M+ K
Sbjct: 462 VILSNLYASAGRWEDVNNVRAMMMQK 487


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/635 (37%), Positives = 362/635 (57%), Gaps = 19/635 (2%)

Query: 235 SALVSGFARLGNFYYARKIFEQM-------IQKNVVSMN----GLMEGRRKGKEVHGYLI 283
           + L+SG+    +   A  +F+ M       I   ++S+     GL      G+ +HGY +
Sbjct: 84  TTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAV 143

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
           ++GL + V VG+ L++MY K G I + R VF  M  ++ VSW  +I+GL + G  +EA++
Sbjct: 144 KTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALV 203

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            F  M R  +   +++    L +CA  G +  G++IH + +K G D    V+N L ++Y 
Sbjct: 204 YFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYN 263

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE--AVKYYLDMRRAGWSPNGVT 461
             G L   L +F  M   D VSW ++I        +  E  AV+ ++ MR +  SPN  T
Sbjct: 264 KCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQ---MGQEECAVQAFIRMRESDVSPNEYT 320

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           F  +++  ++ +  + G Q+HA ++   +A   ++EN++++ Y KCG++     IF  M+
Sbjct: 321 FAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMT 380

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
            RRD VSW+++I+GY     + +A  L+ +M   G +   F  A+VLSAC ++A LE G 
Sbjct: 381 -RRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGK 439

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           ++HA  +   LE   ++ SAL++MY KCG I+ ASR FD     ++ SW +MI+GYA HG
Sbjct: 440 QLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHG 499

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
           +  + + LF ++   G  PD VTF+GVLSACSHAGLVD GF++F +MS+ Y + P  E +
Sbjct: 500 YSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHY 559

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM 761
            CM+DLL RAG L   E  I  MP   + ++W T+L A CR +    E GR+ A  + ++
Sbjct: 560 GCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRA-CRVHG-DVERGRRTAERILQL 617

Query: 762 EPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDES 821
           EP  A  ++ LAN+YAS GKW + A  RK MK   V KE G SW+ +KD V  FVAGD S
Sbjct: 618 EPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRS 677

Query: 822 HPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLE 856
           HP+ + IY  L  L  +   A  V +T F  +DLE
Sbjct: 678 HPQGEDIYNMLDLLASRTELADCVQETGFLPYDLE 712



 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 149/562 (26%), Positives = 259/562 (46%), Gaps = 61/562 (10%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM- 77
           D+   N  +   V+ G L +A ++FD+M  ++ +SW  ++SGY +   S+EA  +FK M 
Sbjct: 48  DLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR 107

Query: 78  VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY---G 134
           V +G  ++ + L    +AC     S   +G  +H   +K+       V + L+ MY   G
Sbjct: 108 VESGLRIDPFILSLAHKACGL--NSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNG 165

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
              E     RR+F E+  R+++SW +II+   + G        FS M R    Y    + 
Sbjct: 166 KIFE----GRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEY----DS 217

Query: 195 YTFG-SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKI 253
           YTF  +L   A S  L+     ++I A   K G     +V + L + + + G   Y   +
Sbjct: 218 YTFAIALKACADSGALNYG---REIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTL 274

Query: 254 FEQMIQKNVVSMNGLME-----GRRK---------------------------------- 274
           FE+M  ++VVS   ++      G+ +                                  
Sbjct: 275 FEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARI 334

Query: 275 --GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
             G+++H  ++  GL   ++V N ++ MYAKCG +  S  +F  M  +D VSW+T+I+G 
Sbjct: 335 EWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGY 394

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            Q G   EA      MR +G   + F+L S LS+C ++  +  G+Q+H   L +GL+   
Sbjct: 395 SQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTA 454

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V +AL+++Y   G +    ++F      D VSW ++I  +A+      E +  +  + R
Sbjct: 455 MVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAE-HGYSREVIDLFEKIPR 513

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMD 511
            G  P+ VTFI +L+A S   +  LG +  +A   KY ++        ++    + G + 
Sbjct: 514 VGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLS 573

Query: 512 DCEKIFARMSERRDEVSWNSMI 533
           D E +   M   RD+V W++++
Sbjct: 574 DAEHMIEAMPFHRDDVVWSTLL 595



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 142/527 (26%), Positives = 250/527 (47%), Gaps = 42/527 (7%)

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR-RDGLMSSNFSLI 361
           K G + ++R +F  M  KD +SW T+ISG        EA++ F  MR   GL    F L 
Sbjct: 61  KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
               +C     +  G+ +HG  +K GL + V V +ALL +Y   G +    +VF  MP  
Sbjct: 121 LAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR 180

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           + VSW ++I     +     EA+ Y+ +M R+    +  TF   L A +       G ++
Sbjct: 181 NVVSWTAIITGLVRA-GYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREI 239

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           HAQ +K      + + N L + Y KCG+++    +F +MS  RD VSW ++I+  +    
Sbjct: 240 HAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMS-MRDVVSWTTIITTLVQMGQ 298

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
              A+     M +     + +TFA V+S CA++A +E G ++HA  +   L   + + ++
Sbjct: 299 EECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENS 358

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           ++ MY+KCG++  +S  F  M  R++ SW+++I+GY++ GH  +A  L S M+++GP P 
Sbjct: 359 IMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPT 418

Query: 662 HVTFVGVLSACS-----------HAGLVDEGFKH----FKSMSQVYGLIPQLEQ------ 700
                 VLSAC            HA ++  G +H      ++  +Y     +E+      
Sbjct: 419 EFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFD 478

Query: 701 ---------FSCMVDLLGRAGELDKIEEFINKMP---ITPNSLIWRTVLGACCRANCRKT 748
                    ++ M++     G   ++ +   K+P   + P+S+ +  VL AC  A     
Sbjct: 479 AAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGL--V 536

Query: 749 ELGRKAANML---FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAM 792
           +LG +  N +   +++ P    +Y  + ++    G+  D     +AM
Sbjct: 537 DLGFRYFNAMSKKYQISPSKE-HYGCMIDLLCRAGRLSDAEHMIEAM 582



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 218/471 (46%), Gaps = 52/471 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +L H   +K G    VF+ + L+++Y + G +    ++F EMP RN VSW  I++G    
Sbjct: 136 ELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRA 195

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G + EA   F EM R+    + Y     L+AC + G     +G ++H   +K        
Sbjct: 196 GYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSG--ALNYGREIHAQAMKKGFDVSSF 253

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V+N L  MY  C    +    +FE++  RD++SW +II+   Q G      + F RM+  
Sbjct: 254 VANTLATMYNKC-GKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRES 312

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                + PNEYTF ++I+   +  L+     +Q+ A++   GL + L V +++++ +A+ 
Sbjct: 313 ----DVSPNEYTFAAVISGCAN--LARIEWGEQLHALILHLGLAASLSVENSIMTMYAKC 366

Query: 245 GNFYYARKIFEQMIQKNVVSMNGL---------------------MEGRRK--------- 274
           G    +  IF +M ++++VS + +                     MEG +          
Sbjct: 367 GQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVL 426

Query: 275 -----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      GK++H Y++  GL     V + L+NMY KCG+I+++  +F      D V
Sbjct: 427 SACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIV 486

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGE 382
           SW  MI+G  ++G   E I  F  + R GL   + + I  LS+C+  G + LG +  +  
Sbjct: 487 SWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAM 546

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH-DQVSWNSVIGA 432
             K  +         ++ L   AG LS    +   MP H D V W++++ A
Sbjct: 547 SKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRA 597



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 173/355 (48%), Gaps = 15/355 (4%)

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           +D+  SN  L      G+L    ++F  M + D++SW ++I  + ++    SEA+  + +
Sbjct: 47  TDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNAND-SSEALLLFKN 105

Query: 450 MR-RAGWSPNGVTFINILA--AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
           MR  +G   +   FI  LA  A    S    G  +H   +K  + N   + +ALL  Y K
Sbjct: 106 MRVESGLRID--PFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTK 163

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWF--MMQRGQRLDHFTF 564
            G++ +  ++F  M   R+ VSW ++I+G +      +A  LV+F  M +     D +TF
Sbjct: 164 NGKIFEGRRVFHEMP-MRNVVSWTAIITGLVRAGYNKEA--LVYFSEMWRSRVEYDSYTF 220

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
           A  L ACA    L  G E+HA  ++   +    + + L  MY+KCG+++Y    F+ M +
Sbjct: 221 AIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSM 280

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           R+V SW ++I+   + G  + A+  F +M+     P+  TF  V+S C++   ++ G + 
Sbjct: 281 RDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWG-EQ 339

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI-WRTVLG 738
             ++    GL   L   + ++ +  + G+L       ++M  T   ++ W T++ 
Sbjct: 340 LHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEM--TRRDIVSWSTIIA 392



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 6/197 (3%)

Query: 556 GQRLDHFTFATVLSA-CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
           G+RL  FT   V S  C  +  LER  +  +  +    + D+   +  +    K G +  
Sbjct: 10  GRRL--FTAPAVASTECIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGN 67

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP-DHVTFVGVLSACS 673
           A R FD M  ++  SW ++ISGY       +AL LF  M+++  L  D         AC 
Sbjct: 68  ARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACG 127

Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
               V+ G +     +   GL+  +   S ++D+  + G++ +     ++MP+  N + W
Sbjct: 128 LNSDVNYG-ELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR-NVVSW 185

Query: 734 RTVLGACCRANCRKTEL 750
             ++    RA   K  L
Sbjct: 186 TAIITGLVRAGYNKEAL 202


>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
 gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 251/766 (32%), Positives = 408/766 (53%), Gaps = 72/766 (9%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A   F  +  RD++SWNS++S Y Q G+++   ++F  M REG  +  +    TF  ++ 
Sbjct: 133 ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGR----TFAIILK 188

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
               S L  + L  QI  +V + G  +D+   SAL+  +A+   F  + ++F+ + +KN 
Sbjct: 189 VC--SFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS 246

Query: 263 VSMNGLMEG-----------------------------------------RRKGKEVHGY 281
           VS + ++ G                                          R G ++H +
Sbjct: 247 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAH 306

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
            ++S       V    ++MYAKC  + D++ +F      +  S+N MI+G  Q     +A
Sbjct: 307 ALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKA 366

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           ++ F  +   GL     SL     +CA +  +  G QI+G  +K  L  DV V+NA + +
Sbjct: 367 LLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDM 426

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y     L+   +VF  M   D VSWN++I A  +      E +  ++ M R+   P+  T
Sbjct: 427 YGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH-EQNGKGYETLFLFVSMLRSRIEPDEFT 485

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           F +IL A +  S+G  G ++H+ ++K  +A+ +++  +L+  Y KCG +++ EKI +R  
Sbjct: 486 FGSILKACTGGSLG-YGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFF 544

Query: 522 ERRDE-------------------VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
           +R +                    VSWNS+ISGY+  E    A  L   MM+ G   D F
Sbjct: 545 QRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKF 604

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           T+ATVL  CA++A+   G ++HA  ++  L+ DV I S LVDMYSKCG +  +   F+  
Sbjct: 605 TYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKS 664

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
             R+  +WN+MI GYA HG G++A+ LF +M L+   P+HVTF+ +L AC+H GL+D+G 
Sbjct: 665 LRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGL 724

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
           ++F  M + YGL PQL  +S MVD+LG++G++ +  E I +MP   + +IWRT+LG C  
Sbjct: 725 EYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCT- 783

Query: 743 ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
            +    E+  +A   L  ++PQ++  Y LL+N+YA  G WE V+  R+ M+  ++KKE G
Sbjct: 784 IHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPG 843

Query: 803 CSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR---DAGYV 845
           CSWV +KD +HVF+ GD++HP  + IYE+L  +  +M+   D+ +V
Sbjct: 844 CSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFV 889



 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 182/669 (27%), Positives = 322/669 (48%), Gaps = 78/669 (11%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV   N +IN Y +  D+  A+  F+ MP R+ VSW  ++SGY   G S ++ ++F +M 
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           R G   +      +L+ C     +    GMQ+H +V++     D + ++ L+ MY     
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTS--LGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             + + R+F+ I  ++ +SW++II+   Q        K F  MQ    + +   ++  + 
Sbjct: 231 FVE-SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ----KVNAGVSQSIYA 285

Query: 199 SLIT--AAYSSVLSGSYLLQQIL-------AMVKKAGLLSDLYVG--------------- 234
           S++   AA S +  G  L    L        +V+ A L  D+Y                 
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL--DMYAKCDNMQDAQILFDNSE 343

Query: 235 -------SALVSGFARLGNFYYARKIFEQMIQKNV----VSMNG------LMEGRRKGKE 277
                  +A+++G+++  + + A  +F +++   +    +S++G      L++G  +G +
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 403

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           ++G  I+S L   V V N  ++MY KC  + ++  VF  M  +D+VSWN +I+  +QNG 
Sbjct: 404 IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 463

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCA--SLGWIMLGQQIHGEGLKLGLDSDVSVS 395
             E +  F +M R  +    F+  S L +C   SLG+   G +IH   +K G+ S+ SV 
Sbjct: 464 GYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGY---GMEIHSSIVKSGMASNSSVG 520

Query: 396 NALLSLYADAGYLSRCLKV---FF-----------LMPEHDQ------VSWNSVIGAFAD 435
            +L+ +Y+  G +    K+   FF           L   H++      VSWNS+I  +  
Sbjct: 521 CSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVM 580

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
            E    +A   +  M   G +P+  T+  +L   ++ +   LG Q+HAQVIK  + ++  
Sbjct: 581 KEQ-SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVY 639

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           I + L+  Y KCG++ D   +F + S RRD V+WN+MI GY H+    +A+ L   M+  
Sbjct: 640 ICSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE 698

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRAC-LEFDVVIGSALVDMYSKCGRIDY 614
             + +H TF ++L ACA +  +++G+E      R   L+  +   S +VD+  K G++  
Sbjct: 699 NIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKR 758

Query: 615 ASRFFDLMP 623
           A      MP
Sbjct: 759 ALELIREMP 767



 Score =  229 bits (584), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 160/544 (29%), Positives = 260/544 (47%), Gaps = 59/544 (10%)

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           N ++N Y+K   +  + S F  M  +D VSWN+M+SG  QNG   ++I  F  M R+G+ 
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
               +    L  C+ L    LG QIHG  +++G D+DV  ++ALL +YA        L+V
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  +PE + VSW+++I     +  L+S A+K++ +M++     +   + ++L + ++ S 
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNN-LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 296

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            +LG Q+HA  +K + A +  +  A L  Y KC  M D + +F   SE  +  S+N+MI+
Sbjct: 297 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN-SENLNRQSYNAMIT 355

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           GY   E   KA+ L   +M  G   D  + + V  ACA V  L  G++++   +++ L  
Sbjct: 356 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL 415

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           DV + +A +DMY KC  +  A R FD M  R+  SWN++I+ + ++G G + L LF  M 
Sbjct: 416 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 475

Query: 655 LDGPLPDHVTFVGVLSACS----------HAGLVDEGFKHFKS-------MSQVYGLIPQ 697
                PD  TF  +L AC+          H+ +V  G     S       M    G+I +
Sbjct: 476 RSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEE 535

Query: 698 LEQF-SCMVDLLGRAGELDKIEEFINK--------------------------------- 723
            E+  S        +G ++++E+  NK                                 
Sbjct: 536 AEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM 595

Query: 724 -MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV--LLANMYASGG 780
            M ITP+   + TVL  C  AN     LG++    + + E Q+ V Y+   L +MY+  G
Sbjct: 596 EMGITPDKFTYATVLDTC--ANLASAGLGKQIHAQVIKKELQSDV-YICSTLVDMYSKCG 652

Query: 781 KWED 784
              D
Sbjct: 653 DLHD 656



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 145/587 (24%), Positives = 265/587 (45%), Gaps = 71/587 (12%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +++ G   DV   + L+++Y +      + ++F  +P++NSVSW+ I++G     + 
Sbjct: 203 HGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLL 262

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           + A K FKEM +    +++    SVLR+C     S  + G Q+H   LKS+   DG+V  
Sbjct: 263 SLALKFFKEMQKVNAGVSQSIYASVLRSC--AALSELRLGGQLHAHALKSDFAADGIVRT 320

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
             + MY  C    D A+ +F+  E  +  S+N++I+ YSQ         LF R+   G  
Sbjct: 321 ATLDMYAKCDNMQD-AQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLG 379

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           +    +E +   +  A   +++ G     QI  +  K+ L  D+ V +A +  + +    
Sbjct: 380 F----DEISLSGVFRAC--ALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQAL 433

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------------- 274
             A ++F++M +++ VS N ++    +                                 
Sbjct: 434 AEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC 493

Query: 275 -------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF-RFM--------- 317
                  G E+H  +++SG+    +VG  L++MY+KCG I+++  +  RF          
Sbjct: 494 TGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTM 553

Query: 318 ----------IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
                     + +  VSWN++ISG       E+A M F  M   G+    F+  + L +C
Sbjct: 554 EELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC 613

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
           A+L    LG+QIH + +K  L SDV + + L+ +Y+  G L     +F      D V+WN
Sbjct: 614 ANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWN 673

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           ++I  +A       EA++ +  M      PN VTFI+IL A +   +   G +    + +
Sbjct: 674 AMICGYA-HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKR 732

Query: 488 -YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            Y +  +    + ++   GK G++    ++   M    D+V W +++
Sbjct: 733 DYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 779



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 172/370 (46%), Gaps = 40/370 (10%)

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
           ++NFS +     CA  G + LG+Q H   +  G      V N LL +Y ++        V
Sbjct: 48  TTNFSFV--FKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMV 105

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVS------------------------------EAV 444
           F  MP  D VSWN +I  ++ S  +                                +++
Sbjct: 106 FDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSI 165

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
           + ++DM R G   +G TF  IL   S      LG Q+H  V++     +    +ALL  Y
Sbjct: 166 EVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMY 225

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            K     +  ++F  + E ++ VSW+++I+G + N LL  A+     M +    +    +
Sbjct: 226 AKGKRFVESLRVFQGIPE-KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIY 284

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
           A+VL +CA+++ L  G ++HA  +++    D ++ +A +DMY+KC  +  A   FD    
Sbjct: 285 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSEN 344

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
            N  S+N+MI+GY++  HG KAL LF ++   G   D ++  GV  AC+    + EG   
Sbjct: 345 LNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL-- 402

Query: 685 FKSMSQVYGL 694
                Q+YGL
Sbjct: 403 -----QIYGL 407



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 194/441 (43%), Gaps = 90/441 (20%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           +K   + DV + N  I++Y +   LA A ++FDEM  R++VSW  I++ +   G   E  
Sbjct: 409 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 468

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
            +F  M+R+    + +  GS+L+AC         +GM++H  ++KS    +  V   LI 
Sbjct: 469 FLFVSMLRSRIEPDEFTFGSILKACT---GGSLGYGMEIHSSIVKSGMASNSSVGCSLID 525

Query: 132 MYGSC---LESTDCARRIF---------EEIETRD-------LISWNSIISVYSQRGDTI 172
           MY  C    E+     R F         EE+E           +SWNSIIS Y  +  + 
Sbjct: 526 MYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSE 585

Query: 173 SVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLY 232
               LF+RM   G    + P+++T+ +++    +  L+ + L +QI A V K  L SD+Y
Sbjct: 586 DAQMLFTRMMEMG----ITPDKFTYATVLDTCAN--LASAGLGKQIHAQVIKKELQSDVY 639

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA 292
           + S LV  +++ G+ + +R +FE+ ++++ V+ N ++ G                     
Sbjct: 640 ICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICG--------------------- 678

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
                   YA  G  +++  +F  MI                                + 
Sbjct: 679 --------YAHHGKGEEAIQLFERMI-------------------------------LEN 699

Query: 353 LMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           +  ++ + IS L +CA +G I  G +  +      GLD  +   + ++ +   +G + R 
Sbjct: 700 IKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRA 759

Query: 412 LKVFFLMP-EHDQVSWNSVIG 431
           L++   MP E D V W +++G
Sbjct: 760 LELIREMPFEADDVIWRTLLG 780



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 112/260 (43%), Gaps = 50/260 (19%)

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
           R  VS+N  ++  I    +P       F+ Q    +    F+ V   CA    LE G + 
Sbjct: 12  RSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVNS-VSTTNFSFVFKECAKQGALELGKQA 70

Query: 584 HA----CGVRA------CL--------EF-------------DVVIGSALVDMYSKCGRI 612
           HA     G R       CL        +F             DVV  + +++ YSK   +
Sbjct: 71  HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDM 130

Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
             A+ FF++MPVR+V SWNSM+SGY ++G   K++ +F  M  +G   D  TF  +L  C
Sbjct: 131 FKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVC 190

Query: 673 SHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD---KIEEFINKMPI--- 726
           S       G        Q++G++ ++    C  D++  +  LD   K + F+  + +   
Sbjct: 191 SFLEDTSLGM-------QIHGIVVRV---GCDTDVVAASALLDMYAKGKRFVESLRVFQG 240

Query: 727 --TPNSLIWRTVLGACCRAN 744
               NS+ W  ++  C + N
Sbjct: 241 IPEKNSVSWSAIIAGCVQNN 260



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 54/96 (56%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q++K     DV++C+TL+++Y + GDL  +  +F++   R+ V+W  ++ GY H 
Sbjct: 623 KQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHH 682

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G   EA ++F+ M+      N     S+LRAC   G
Sbjct: 683 GKGEEAIQLFERMILENIKPNHVTFISILRACAHMG 718


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 258/812 (31%), Positives = 424/812 (52%), Gaps = 64/812 (7%)

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE 148
           L ++LR C          G+Q+H   + S      L ++  +A++   L     ARR  +
Sbjct: 35  LLALLRGC--VSAPHLPLGLQIHARAVVSG----ALSNHNHLALHTRLLGMYVLARRFRD 88

Query: 149 EIETRDLIS---------WNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
            +     +          WN +I  ++  G        + +M       S  P+ +T   
Sbjct: 89  AVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPS--PDAHTLPY 146

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           ++ +   + L    L + +    +  GL SD+YVGSAL+  ++  G    AR  F+ M  
Sbjct: 147 VVKSC--AALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPW 204

Query: 260 KNVVSMNGLMEGRRK-----------------------------------------GKEV 278
           ++ V  N +M+G  K                                         G ++
Sbjct: 205 RDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQL 264

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H   ++ GL   VAV N L++MYAKC  +DD+  +F  +   D V+WN MISG  QNG  
Sbjct: 265 HSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLL 324

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           +EA+  FC M R G    + +L+S L +   L  +  G+++HG  ++  +  D  + +AL
Sbjct: 325 DEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSAL 384

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           + +Y     +     ++      D V  ++VI  +     +  +A++ +  +      PN
Sbjct: 385 VDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYV-LNGMSEKALQMFRYLLEQCIKPN 443

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
            VT  ++L A +S S   LG ++H  V++     +  +E+AL+  Y KCG +D    IF+
Sbjct: 444 AVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFS 503

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
           +MS  +DEV+WNSMIS +  N    +A++L   M   G + ++ T ++ LSACAS+  + 
Sbjct: 504 KMS-LKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIY 562

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
            G E+H   ++  ++ D+   SAL+DMY+KCG ++ A R F+ MP +N  SWNS+IS Y 
Sbjct: 563 YGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYG 622

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
            HG   ++++   +M+ +G  PDHVTF+ ++SAC+HAGLV+EG + F+ M++ Y + P++
Sbjct: 623 AHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRM 682

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
           E F+CMVDL  R+G LDK  +FI  MP  P++ IW  +L A CR + R  EL   A+  L
Sbjct: 683 EHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHA-CRVH-RNVELADIASQEL 740

Query: 759 FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
           F+++P N+  YVL++N+ A  G+W+ V+K R+ MK+ ++ K  G SWV + +  H+FVA 
Sbjct: 741 FKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVAS 800

Query: 819 DESHPEKDLIYEKLKELNQKMRDAGYVPQTKF 850
           D+SHPE + IY  LK L Q++R+ GYVP+   
Sbjct: 801 DKSHPESEDIYTSLKALLQELREEGYVPRPDL 832



 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 172/571 (30%), Positives = 279/571 (48%), Gaps = 52/571 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +L H      G A DV++ + LI +Y   G L  A   FD MP R+ V W  ++ GY   
Sbjct: 161 RLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKA 220

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G    A ++F+ M  +G   N   L   L  C     +    G+Q+H L +K     +  
Sbjct: 221 GDVGGAVRLFRNMRVSGCEPNFATLACFLSVCA--AEADLLSGVQLHSLAVKCGLEQEVA 278

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V+N L++MY  C    D A R+FE +   DL++WN +IS   Q G       LF  M R 
Sbjct: 279 VANTLLSMYAKC-RCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRS 337

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSG--------SYLLQQILAM--------------- 221
           G R    P+  T  SL+ A   + L+G         Y+++  + M               
Sbjct: 338 GAR----PDSVTLVSLLPAL--TDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKC 391

Query: 222 --------VKKAGLLSDLYVGSALVSGFARLGNFYYARKIF----EQMIQKNVVSMNGLM 269
                   +  A    D+ +GS ++SG+   G    A ++F    EQ I+ N V++  ++
Sbjct: 392 RDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVL 451

Query: 270 EGRRK------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      G+E+HGY++R+       V + L++MYAKCG +D S  +F  M  KD V
Sbjct: 452 PACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEV 511

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           +WN+MIS   QNG  +EA+  F  M  +G+  +N ++ S LS+CASL  I  G++IHG  
Sbjct: 512 TWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVI 571

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           +K  + +D+   +AL+ +YA  G +   L+VF  MP+ ++VSWNS+I A+  +  LV E+
Sbjct: 572 IKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYG-AHGLVKES 630

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLS 502
           V +   M+  G+ P+ VTF+ +++A +   + + G Q+   + K Y +A        ++ 
Sbjct: 631 VSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVD 690

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            Y + G +D   +  A M  + D   W +++
Sbjct: 691 LYSRSGRLDKAIQFIADMPFKPDAGIWGALL 721



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 219/469 (46%), Gaps = 52/469 (11%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K G   +V + NTL+++Y +   L  A +LF+ +P  + V+W  ++SG    G+
Sbjct: 264 LHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGL 323

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            +EA  +F +M+R+G   +   L S+L A  +   +G K G +VH  ++++    D  + 
Sbjct: 324 LDEALGLFCDMLRSGARPDSVTLVSLLPALTDL--NGLKQGKEVHGYIIRNCVHMDAFLV 381

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L+ +Y  C      AR +++     D++  +++IS Y   G +    ++F    R   
Sbjct: 382 SALVDIYFKC-RDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMF----RYLL 436

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              +KPN  T  S++ A  S  +S   L Q+I   V +       YV SAL+  +A+ G 
Sbjct: 437 EQCIKPNAVTVASVLPACAS--ISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGR 494

Query: 247 FYYARKIFEQMIQKNVVSMNGL---------------------MEGRR------------ 273
              +  IF +M  K+ V+ N +                     MEG +            
Sbjct: 495 LDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSA 554

Query: 274 --------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                    GKE+HG +I+  +   +   + L++MYAKCG ++ +  VF FM  K+ VSW
Sbjct: 555 CASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSW 614

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N++IS    +G  +E++     M+ +G    + + ++ +S+CA  G +  G Q+     K
Sbjct: 615 NSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTK 674

Query: 386 LGLDSDVSVSNA-LLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
             L +      A ++ LY+ +G L + ++    MP + D   W +++ A
Sbjct: 675 EYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHA 723



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 163/336 (48%), Gaps = 10/336 (2%)

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD---VSVSNALLSLYADAGYLSR 410
           +SS   L++ L  C S   + LG QIH   +  G  S+   +++   LL +Y  A     
Sbjct: 29  VSSADRLLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRD 88

Query: 411 CLKVFFLMPEH---DQVSWNSVIGAFADSEALVSEAVKYYLDM--RRAGWSPNGVTFINI 465
            + VF  +P       + WN +I  F  +    S AV +Y+ M    A  SP+  T   +
Sbjct: 89  AVAVFSALPRAAAGSSLPWNWLIRGFT-AAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYV 147

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           + + ++     LG  VH       +A++  + +AL+  Y   G + D    F  M   RD
Sbjct: 148 VKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGM-PWRD 206

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
            V WN M+ GYI    +  A+ L   M   G   +  T A  LS CA+ A L  G+++H+
Sbjct: 207 CVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHS 266

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
             V+  LE +V + + L+ MY+KC  +D A R F+L+P  ++ +WN MISG  ++G  D+
Sbjct: 267 LAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDE 326

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           AL LF  M   G  PD VT V +L A +    + +G
Sbjct: 327 ALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQG 362



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 163/359 (45%), Gaps = 42/359 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  I+++    D FL + L+++Y +  D+ +A  L+D     + V  + ++SGY
Sbjct: 360 KQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGY 419

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              GMS +A +MF+ ++      N   + SVL AC     S    G ++H  VL++    
Sbjct: 420 VLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASI--SALPLGQEIHGYVLRNAYEG 477

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V + L+ MY  C    D +  IF ++  +D ++WNS+IS +SQ G+      LF +M
Sbjct: 478 KCYVESALMDMYAKC-GRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQM 536

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             EG +Y    N  T  S ++A  S  L   Y  ++I  ++ K  + +D++  SAL+  +
Sbjct: 537 CMEGIKY----NNVTISSALSACAS--LPAIYYGKEIHGVIIKGPIKADIFAESALIDMY 590

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
           A+ GN   A ++FE M  KN VS                              N +++ Y
Sbjct: 591 AKCGNMELALRVFEFMPDKNEVSW-----------------------------NSIISAY 621

Query: 302 AKCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
              G + +S S    M       D V++  +IS     G  EE +  F  M ++ L++ 
Sbjct: 622 GAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAP 680


>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 774

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/690 (34%), Positives = 382/690 (55%), Gaps = 38/690 (5%)

Query: 273 RKGKEVHGYLI--RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
           ++G  +H Y++     + + + + N L+NMY KCG +D +R +F  M  ++ VSW  ++S
Sbjct: 95  KQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVS 154

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           G  Q G   E    F  M       + F+  S L +C     +  G Q+H   LK+ LD 
Sbjct: 155 GYAQFGLIRECFALFSGMLA-CFRPNEFAFASVLCACEEQD-VKYGLQVHAAALKMSLDF 212

Query: 391 DVSVSNALLSLYA--DAGYLSRCLK-------VFFLMPEHDQVSWNSVIGAFADSEALVS 441
            V V+NAL+++Y+    G+   C +       VF  M   + +SWNS+I  F     L  
Sbjct: 213 SVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMISGF-QFRGLGD 271

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAA-----ASSFSMGKLGH-----QVHAQVIKYNVA 491
           +A+  +  M   G   N  T + +L++     ++S  +    H     Q+H   +K  + 
Sbjct: 272 KAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLI 331

Query: 492 NETTIENALLSCYGKCG-EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
           +E  +  AL+  Y   G  + DC K+F   S   D VSW ++IS +   +  P+   L++
Sbjct: 332 SEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAERD--PEQAFLLF 389

Query: 551 FMMQRGQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
             + R    LD  TF+  L ACA   T +   EVH+  ++     D V+ +AL+  Y + 
Sbjct: 390 CQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRS 449

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
           G +  + + F  M   ++ SWNSM+  YA HG    AL LF QM +    PD  TFV +L
Sbjct: 450 GSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQMDVH---PDSATFVALL 506

Query: 670 SACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPN 729
           +ACSHAGLV+EG + F SM++ +G+ P L+ +SCMVDL GRAG++ + EE I KMP+ P+
Sbjct: 507 AACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPD 566

Query: 730 SLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKAR 789
           S+IW ++LG+C +    + +L + AA+    ++P+N++ Y+ ++N+Y+SGG + +    R
Sbjct: 567 SVIWSSLLGSCRKHG--EADLAKLAADKFKVLDPKNSLAYIQMSNIYSSGGSFIEAGLIR 624

Query: 790 KAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTK 849
           K M++++V+K  G SWV +   VH F +G + HP++  I  +L+ L  ++++ GY P+  
Sbjct: 625 KEMRDSKVRKRPGLSWVEVGKQVHEFTSGGQHHPKRQAILSRLETLIGQLKEMGYAPEIG 684

Query: 850 FALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKLP-----IRIMKNLRVCGDCHSAFKFI 904
            AL D+E E  ED + +HSEK+A+ F +      P     I+IMKN+R+C DCH+  K  
Sbjct: 685 SALHDIEVEHIEDQLFHHSEKMALVFAIMNEGISPCAGNVIKIMKNIRICVDCHNFMKLA 744

Query: 905 SKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           SK+  +EIV+RDSNRFHHF    CSC DYW
Sbjct: 745 SKLFQKEIVVRDSNRFHHFKYATCSCNDYW 774



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 142/488 (29%), Positives = 231/488 (47%), Gaps = 72/488 (14%)

Query: 6   LFHLQILKHG-FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           L H  + KH     D+FL N L+N+Y + G L  A  LFD+MP RN VSW  +VSGY   
Sbjct: 100 LHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQF 159

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G+  E   +F  M+ A F  N +A  SVL AC+E      K+G+QVH   LK +  F   
Sbjct: 160 GLIRECFALFSGML-ACFRPNEFAFASVLCACEE---QDVKYGLQVHAAALKMSLDFSVY 215

Query: 125 VSNVLIAMY--------GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
           V+N LI MY        GSC ++TD A  +F+ +E R+LISWNS+IS +  RG       
Sbjct: 216 VANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMISGFQFRGLGDKAIG 275

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITA-----AYSSVLSGSYLLQ---QILAMVKKAGLL 228
           LF+ M   G R+    N  T   ++++     + S  ++ ++ L+   Q+  +  K+GL+
Sbjct: 276 LFAHMYCNGIRF----NSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLI 331

Query: 229 SDLYVGSALVSGFARLGNF-------------------------YYARK-------IFEQ 256
           S++ V +ALV  +A LG                            +A +       +F Q
Sbjct: 332 SEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAERDPEQAFLLFCQ 391

Query: 257 MIQKNVV----------SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
           + ++N V                   +   EVH  +++ G  +   V N L++ Y + G+
Sbjct: 392 LHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGS 451

Query: 307 IDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
           +  S  VF  M   D VSWN+M+     +G  ++A+  F  M    +   + + ++ L++
Sbjct: 452 LALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM---DVHPDSATFVALLAA 508

Query: 367 CASLGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQV 424
           C+  G +  G QI     +  G+   +   + ++ LY  AG +    ++   MP + D V
Sbjct: 509 CSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSV 568

Query: 425 SWNSVIGA 432
            W+S++G+
Sbjct: 569 IWSSLLGS 576



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 141/315 (44%), Gaps = 24/315 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVG-DLASASKLF-DEMPDRNSVSWACIVS 59
           K+    H   +K G   +V +   L+  Y  +G  ++   KLF D   + + VSW  I+S
Sbjct: 316 KNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIIS 375

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
            +  +    +A  +F ++ R  F+L+R+     L+AC        K   +VH  V+K   
Sbjct: 376 VFAERD-PEQAFLLFCQLHRENFVLDRHTFSIALKACAYFVTE--KNATEVHSQVMKQGF 432

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D +VSN LI  YG    S   + ++F E+   DL+SWNS++  Y+  G       LF 
Sbjct: 433 HNDTVVSNALIHAYGRS-GSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFK 491

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           +M        + P+  TF +L+ A   +  V  G+ +     +M +  G+   L   S +
Sbjct: 492 QM-------DVHPDSATFVALLAACSHAGLVEEGTQIFN---SMTESHGIAPHLDHYSCM 541

Query: 238 VSGFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
           V  + R G  + A ++  +M ++ + V  + L+   RK  E     + +  F ++   N 
Sbjct: 542 VDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKVLDPKNS 601

Query: 297 LV-----NMYAKCGT 306
           L      N+Y+  G+
Sbjct: 602 LAYIQMSNIYSSGGS 616


>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
 gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/587 (38%), Positives = 354/587 (60%), Gaps = 14/587 (2%)

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
           D L+S+   LI+ +S+C+S+ +    + +H   +K    +   + + L+S Y + G    
Sbjct: 38  DSLVSA---LITAISTCSSISYC---RALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKD 91

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR-RAGWSPNGVTFINILAAA 469
            L++F  +P+ D VSWNS+I  F+   A +   +     MR   G  PN VT I +++A 
Sbjct: 92  ALELFDELPDKDLVSWNSLISGFS-RRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSAC 150

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
           +      +G  +H   +K  +  E  + N+L++ YGKCG ++    +F  MS  +  VSW
Sbjct: 151 AGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMS-VQSLVSW 209

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
           NSM++ ++H  L  K +     M + G   D  T  ++L AC ++   +    VH   + 
Sbjct: 210 NSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILN 269

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
             L+ ++ I +AL+D+Y+K G +  + + F  M   +  +W +M+S YA HG G +A+  
Sbjct: 270 GGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEH 329

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           F  M  +G +PDHVTF  +LSACSH+GLV+EG  +FK M + YG+  ++E +SCMVDLLG
Sbjct: 330 FELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLG 389

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVN 768
           R+G L+   + I  MP+ PNS +W  ++GAC  R N    ELG++ A  LF ++P ++ N
Sbjct: 390 RSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGN---IELGKEVAERLFSLDPSDSRN 446

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
           Y+ L+NMY++ G+W D +K R  MKE  + +  GCS++   + +H FV GD+SHP+ + I
Sbjct: 447 YITLSNMYSAAGQWRDASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQI 506

Query: 829 YEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRI 887
           Y KL+EL +K R+ G+  +T++ L D++ E KEDL++ HSEK+A+AF +L  N+ +P+ I
Sbjct: 507 YNKLEELVRKNREVGFASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPLII 566

Query: 888 MKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            KN+R+CGDCH   K IS I  R I++RD+ RFHHF +G CSCGDYW
Sbjct: 567 TKNIRICGDCHGFAKLISLIEKRTIIIRDTKRFHHFTNGLCSCGDYW 613



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 193/417 (46%), Gaps = 51/417 (12%)

Query: 167 QRGDTISVFKLFSRMQR--EGFRYSLKPNEYTFG---SLITAAYSSVLSGSYL--LQQIL 219
           QR   + +   F    R    F   L P  + F    SL++A  +++ + S +   + + 
Sbjct: 2   QRASKLLILHKFISSIRLYNSFASQLSPTFHAFSNVDSLVSALITAISTCSSISYCRALH 61

Query: 220 AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--RRK--- 274
             V K+   +  ++G  LVS +  LG    A ++F+++  K++VS N L+ G  RR    
Sbjct: 62  CRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLG 121

Query: 275 -------------------------------------GKEVHGYLIRSGLFDMVAVGNGL 297
                                                GK +HG  ++SG+   V V N L
Sbjct: 122 ICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSL 181

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           +N+Y KCG ++ +  +F  M  +  VSWN+M++     G  E+ I  F  MRR G+ S  
Sbjct: 182 INLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQ 241

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
            +++S L +C +LG   L + +HG  L  GLD +++++ ALL LYA  G LS   KVF  
Sbjct: 242 ATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGG 301

Query: 418 MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
           M   D V+W +++ ++A       EA++++  M R G  P+ VTF ++L+A S   + + 
Sbjct: 302 MINPDAVAWTAMLSSYA-MHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEE 360

Query: 478 GHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           G      + + Y V       + ++   G+ G ++D  K+   M    +   W ++I
Sbjct: 361 GKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALI 417



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 184/387 (47%), Gaps = 51/387 (13%)

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE 148
           + +++ A   C  S   +   +HC V+KS     G + + L++ Y   L  T  A  +F+
Sbjct: 41  VSALITAISTC--SSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVE-LGCTKDALELFD 97

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
           E+  +DL+SWNS+IS +S+R D      L  RM+   F   LKPNE T   +++A     
Sbjct: 98  ELPDKDLVSWNSLISGFSRRADLGICLGLLFRMR---FEMGLKPNEVTVIPVVSACAG-- 152

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN-- 266
           +    + + I  +  K+G+L ++ V ++L++ + + G    A  +FE M  +++VS N  
Sbjct: 153 VGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSM 212

Query: 267 -------GLMEG--------------------------------RRKGKEVHGYLIRSGL 287
                  GL E                                 R+  + VHGY++  GL
Sbjct: 213 VAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGL 272

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
              +A+   L+++YAK GT+ DS  VF  MI  D+V+W  M+S    +G   EAI +F  
Sbjct: 273 DGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFEL 332

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GLDSDVSVSNALLSLYADAG 406
           M R+G++  + +    LS+C+  G +  G+       +  G++  V   + ++ L   +G
Sbjct: 333 MVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSG 392

Query: 407 YLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           +L+   K+   MP E +   W ++IGA
Sbjct: 393 HLNDAYKLIKSMPMEPNSGVWGALIGA 419



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 194/431 (45%), Gaps = 31/431 (7%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H +++K       F+ + L++ YV +G    A +LFDE+PD++ VSW  ++SG++ +
Sbjct: 58  RALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRR 117

Query: 65  G-MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
             +      +F+     G   N   +  V+ AC   G      G  +H + +KS    + 
Sbjct: 118 ADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGE--LDVGKCIHGIAVKSGMLLEV 175

Query: 124 LVSNVLIAMYGS--CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
            V N LI +YG   CLE+  C   +FE +  + L+SWNS+++V+   G        F  M
Sbjct: 176 KVVNSLINLYGKCGCLEAACC---LFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMM 232

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           +R G    +  ++ T  SL+ A  +  L    L + +   +   GL  +L + +AL+  +
Sbjct: 233 RRAG----INSDQATVVSLLLACEN--LGVRKLAEAVHGYILNGGLDGNLAIATALLDLY 286

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGL-----MEGR-RKGKEVHGYLIRSGLFDMVAVGN 295
           A+LG    + K+F  MI  + V+   +     M GR R+  E    ++R G+        
Sbjct: 287 AKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFT 346

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNFCAMRR 350
            L++  +  G +++ ++ F+ M     V      ++ M+  L ++G   +A     +M  
Sbjct: 347 HLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMP- 405

Query: 351 DGLMSSNFSLISTL-SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
              M  N  +   L  +C   G I LG+++      L   SD      L ++Y+ AG   
Sbjct: 406 ---MEPNSGVWGALIGACRVRGNIELGKEVAERLFSLD-PSDSRNYITLSNMYSAAGQWR 461

Query: 410 RCLKVFFLMPE 420
              KV  LM E
Sbjct: 462 DASKVRALMKE 472



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 52/99 (52%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K A+  H  IL  G   ++ +   L+++Y ++G L+ + K+F  M + ++V+W  ++S Y
Sbjct: 258 KLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSY 317

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   EA + F+ MVR G + +      +L AC   G
Sbjct: 318 AMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSG 356


>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 815

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 252/767 (32%), Positives = 403/767 (52%), Gaps = 54/767 (7%)

Query: 95  ACQECG-PSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
           A Q+C      + G ++H  +L+S    D  + + L+ MY  C    D ARR+F+ +  R
Sbjct: 56  ALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVD-ARRVFDGMPHR 114

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY 213
           D+++W ++IS ++  GD+     +F+RM +EG    + PN +T  S++ A      S S 
Sbjct: 115 DIVAWTAMISAHTAAGDSDQALDMFARMNQEG----IAPNGFTLASVLKACSGG--SHSK 168

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR 273
              Q+   V K   L D YVGS+LV  +   G    A  +   + +++ VS N L+ G  
Sbjct: 169 FTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYA 228

Query: 274 K-----------------------------------------GKEVHGYLIRSGLFDMVA 292
           +                                         G+ VH  +I+ GL     
Sbjct: 229 RHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNV 288

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           + + LV MY++C + +++  VF  +   D V  + MIS  D++    EA+  F  M   G
Sbjct: 289 LNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMG 348

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
           +  +++  +      +  G   L + +H   +K G      V +A+L++Y   G +    
Sbjct: 349 VKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDAT 408

Query: 413 KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
             F L+ E D  SWN+++ AF  S +   + ++ +  M   G+S N  T++++L   +S 
Sbjct: 409 VTFDLIHEPDTFSWNTILSAFY-SGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSL 467

Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
              + G QVHA ++K  + N+T +   L+  Y + G       +F ++ ER D  SW  +
Sbjct: 468 MNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKER-DAFSWTVI 526

Query: 533 ISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL 592
           +SGY   E   K +     M++   R    T A  LS C+ +A+L  G+++H+  +++  
Sbjct: 527 MSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGW 586

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
              VV G ALVDMY KCG I  A   F     R+  +WN++I GY++HGHG KAL  F Q
Sbjct: 587 NSSVVSG-ALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQ 645

Query: 653 MKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG 712
           M  +G  PD +TFVGVLSACSHAGL++EG K+FKS+S +YG+ P +E ++CMVD+L +AG
Sbjct: 646 MVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAG 705

Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLL 772
            L + E  IN+MP+ P+S IWRT+LGA CR + R  E+  +AA  LFE+EP +A + +LL
Sbjct: 706 RLVEAESLINQMPLAPDSSIWRTILGA-CRIH-RNIEIAERAAERLFELEPHDASSSILL 763

Query: 773 ANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           +N+YA  G+W DV + R  + +  VKKE GCSW+ +   +H+F++ D
Sbjct: 764 SNIYADLGRWSDVTRVRNILLDHGVKKEPGCSWIEINGQIHMFLSQD 810



 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 193/664 (29%), Positives = 314/664 (47%), Gaps = 62/664 (9%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H ++L+     D FL ++L+N+Y + G L  A ++FD MP R+ V+W  ++S +T  G 
Sbjct: 72  LHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGD 131

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           S++A  MF  M + G   N + L SVL+AC   G S  KF  QVH  V+K N   D  V 
Sbjct: 132 SDQALDMFARMNQEGIAPNGFTLASVLKACS--GGSHSKFTHQVHGQVVKLNGLDDPYVG 189

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L+  Y SC E  D A  +   +  R  +SWN++++ Y++ GD   V  +  ++   G 
Sbjct: 190 SSLVEAYTSCGE-LDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGD 248

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
             S    +YT  +++       L  +   Q + A V K GL +D  + S LV  ++R  +
Sbjct: 249 EIS----KYTLPTVLKCCME--LGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLS 302

Query: 247 FYYARKIFEQMIQKNVVSMNGLME------------------------------------ 270
              A ++F ++ + +VV  + ++                                     
Sbjct: 303 AEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGV 362

Query: 271 GRRKG-----KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
             R G     + VH Y+++SG   +  VG+ ++NMY K G + D+   F  +   D+ SW
Sbjct: 363 ASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSW 422

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           NT++S        E+ +  F  M  +G  ++ ++ +S L  C SL  +  G Q+H   LK
Sbjct: 423 NTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILK 482

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            GL +D  VS  L+ +YA +G  +    VF  + E D  SW  ++  +A +E    + V+
Sbjct: 483 SGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEE-AEKVVE 541

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
           Y+  M R    P+  T    L+  S  +    G Q+H+  IK    N + +  AL+  Y 
Sbjct: 542 YFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSG-WNSSVVSGALVDMYV 600

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           KCG + D E +F   SE RD+V+WN++I GY  +    KA++    M+  G+R D  TF 
Sbjct: 601 KCGNIADAEMLFHE-SETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFV 659

Query: 566 TVLSACASVATLERGMEVHAC-----GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
            VLSAC+    L  G +         G+   +E      + +VD+ SK GR+  A    +
Sbjct: 660 GVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEH----YACMVDILSKAGRLVEAESLIN 715

Query: 621 LMPV 624
            MP+
Sbjct: 716 QMPL 719



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 139/575 (24%), Positives = 264/575 (45%), Gaps = 53/575 (9%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           SK     H Q++K     D ++ ++L+  Y   G+L +A  +   +P+R+ VSW  +++G
Sbjct: 167 SKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNG 226

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y   G       + +++V +G  +++Y L +VL+ C E G +  K+G  VH  V+K    
Sbjct: 227 YARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLA--KYGQSVHASVIKRGLE 284

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D ++++ L+ MY  CL + + A  +F  I+  D++  +++IS + +         LF +
Sbjct: 285 TDNVLNSCLVEMYSRCLSAEE-AYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVK 343

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M   G    +KPN Y F  +  A  +S    + L + + A + K+G      VG A+++ 
Sbjct: 344 MSGMG----VKPNHYIFVGI--AGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNM 397

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLM---------------------EG-------- 271
           + ++G    A   F+ + + +  S N ++                     EG        
Sbjct: 398 YVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTY 457

Query: 272 ------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                        R G +VH  +++SGL +   V   LV+MYA+ G    +  VF  +  
Sbjct: 458 VSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKE 517

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           +D+ SW  ++SG  +    E+ +  F +M R+ +  S+ +L  +LS C+ +  +  G Q+
Sbjct: 518 RDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQL 577

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           H   +K G +S V VS AL+ +Y   G ++    +F      DQV+WN++I  ++     
Sbjct: 578 HSWAIKSGWNSSV-VSGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYS-QHGH 635

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIEN 498
             +A+  +  M   G  P+G+TF+ +L+A S   +   G +    +   Y +        
Sbjct: 636 GYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYA 695

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            ++    K G + + E +  +M    D   W +++
Sbjct: 696 CMVDILSKAGRLVEAESLINQMPLAPDSSIWRTIL 730



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 189/396 (47%), Gaps = 40/396 (10%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           + L  CA    +  GQ++H   L+  L  D  + ++LL++Y   G L    +VF  MP  
Sbjct: 55  AALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHR 114

Query: 422 DQVSWNSVIGAFA---DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
           D V+W ++I A     DS+    +A+  +  M + G +PNG T  ++L A S  S  K  
Sbjct: 115 DIVAWTAMISAHTAAGDSD----QALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFT 170

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
           HQVH QV+K N  ++  + ++L+  Y  CGE+D  E +   + ER D VSWN++++GY  
Sbjct: 171 HQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSD-VSWNALLNGYAR 229

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
           +    + M ++  ++  G  +  +T  TVL  C  +   + G  VHA  ++  LE D V+
Sbjct: 230 HGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVL 289

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            S LV+MYS+C   + A   F  +   +V   ++MIS + RH    +AL LF +M   G 
Sbjct: 290 NSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGV 349

Query: 659 LPDHVTFVGVLSACS-----------HAGLVDEGFKHFKSMS----QVYGLIPQLEQFSC 703
            P+H  FVG+    S           HA +V  GF   K +      +Y  +  ++  + 
Sbjct: 350 KPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATV 409

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
             DL+                   P++  W T+L A
Sbjct: 410 TFDLIHE-----------------PDTFSWNTILSA 428



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 93/184 (50%), Gaps = 14/184 (7%)

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
           A  L  CA   TL RG E+HA  +R+ L  D  +  +L++MY KCGR+  A R FD MP 
Sbjct: 54  AAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPH 113

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           R++ +W +MIS +   G  D+AL +F++M  +G  P+  T   VL ACS       G  H
Sbjct: 114 RDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACS-------GGSH 166

Query: 685 FKSMSQVYGLIPQLEQF------SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
            K   QV+G + +L         S +V+     GELD  E  +  +P   + + W  +L 
Sbjct: 167 SKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLP-ERSDVSWNALLN 225

Query: 739 ACCR 742
              R
Sbjct: 226 GYAR 229


>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
          Length = 864

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 266/827 (32%), Positives = 415/827 (50%), Gaps = 79/827 (9%)

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDL 155
           C   G S    G   H  +L S       VSN L+ MY  C   T  A  +F+ +  RD 
Sbjct: 27  CASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARC-GGTAHAHGVFDTMPHRDT 85

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRM----------------QREGFRYSL--------- 190
           +SWN++++ Y   GDT +   LF  M                Q   FR S+         
Sbjct: 86  VSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRR 145

Query: 191 --KPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
               +  T   L+ +     L    L  QI A+  K GL +D+  GSALV  + +  +  
Sbjct: 146 GVALDRTTLAVLLKSCGG--LDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLD 203

Query: 249 YARKIFEQMIQKNVVSMNGLMEG-----------------RRKG---------------- 275
            A + F  M ++N VS    + G                 +R G                
Sbjct: 204 DALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCA 263

Query: 276 --------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
                   +++H + I++       VG  +V++YAK G + D+R  F  +   +  + N 
Sbjct: 264 AMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNA 323

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           M+ GL + G   EA+  F  M R G+     SL    S+CA +     G Q+H   +K G
Sbjct: 324 MMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSG 383

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
            D DV V NA+L LY     L     VF  M + D VSWN++I A   +E    + + + 
Sbjct: 384 FDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECY-EDTIAHL 442

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
            +M R+G  P+  T+ ++L A +     + G  VH + IK  +  +  + + ++  Y KC
Sbjct: 443 NEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKC 502

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
           G + + +K+  R+  + + VSWNS+ISG+   +   +A      M+  G + DHFT+ATV
Sbjct: 503 GAITEAQKLHDRIGGQ-ELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATV 561

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           L  CA++AT+E G ++H   ++  +  D  I S LVDMY+KCG +  +   F+     + 
Sbjct: 562 LDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDF 621

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            SWN+MI GYA HG G +AL +F +M+    +P+H TFV VL ACSH GL+D+G ++F  
Sbjct: 622 VSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHL 681

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           M+  Y L+PQLE F+CMVD+LGR+    +  EFI  MPI  ++++W+T+L  C     R+
Sbjct: 682 MTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSIC---KIRQ 738

Query: 748 -TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
             E+   AA+ +  ++P +A  Y+LL+N+YA  GKW DV++ R+ M++  ++KE GCSW+
Sbjct: 739 DVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWI 798

Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALF 853
            ++  +H F+ GD+ HP    +YE L  L  +M+ +GY P +  ALF
Sbjct: 799 EVQSEMHGFLVGDKVHPRSKEVYEMLNSLIGEMKLSGYEPAS--ALF 843



 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 197/661 (29%), Positives = 316/661 (47%), Gaps = 56/661 (8%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D    NT++  YV  GD  +A+ LF  MPD + VSW  ++SGY   GM   +  +  EM 
Sbjct: 84  DTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMS 143

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           R G  L+R  L  +L++C   G      G+Q+H L +K+    D    + L+ MYG C  
Sbjct: 144 RRGVALDRTTLAVLLKSCG--GLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKC-R 200

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
           S D A R F  +  R+ +SW + I+   Q        +LF +MQR G   S       F 
Sbjct: 201 SLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFR 260

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           S    A    LS +   +Q+ A   K    SD  VG+A+V  +A+ GN   AR+ F  + 
Sbjct: 261 S---CAAMPCLSTA---RQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLP 314

Query: 259 QKNVVSMNGLM-----------------------------------------EGRRKGKE 277
             NV + N +M                                         +G  +G +
Sbjct: 315 HHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQ 374

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VH   ++SG    V V N ++++Y KC  + ++  VF+ M  +DSVSWN +I+ L+QN C
Sbjct: 375 VHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNEC 434

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
           YE+ I +   M R G+   +F+  S L +CA L  +  G  +HG+ +K GL  D  VS+ 
Sbjct: 435 YEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSST 494

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           ++ +Y   G ++   K+   +   + VSWNS+I  F+ ++    EA +++ +M   G  P
Sbjct: 495 VVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQ-SEEAQRFFSEMLDMGVKP 553

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           +  T+  +L   ++ +  +LG Q+H Q+IK  +  +  I + L+  Y KCG M D   +F
Sbjct: 554 DHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMF 613

Query: 518 ARMSERRDEVSWNSMISGY-IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
            + + + D VSWN+MI GY +H + L +A+ +   M +     +H TF  VL AC+ V  
Sbjct: 614 EK-ARKLDFVSWNAMICGYALHGQGL-EALEMFERMQRANVVPNHATFVAVLRACSHVGL 671

Query: 577 LERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMI 634
           L+ G +  H    R  L   +   + +VD+  +      A  F   MP+  +   W +++
Sbjct: 672 LDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLL 731

Query: 635 S 635
           S
Sbjct: 732 S 732



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 159/636 (25%), Positives = 271/636 (42%), Gaps = 77/636 (12%)

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
           TF  L     S+  S     Q   A +  +G +   +V + L+  +AR G   +A  +F+
Sbjct: 19  TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78

Query: 256 QMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
            M  ++ VS N ++                               Y   G  D + S+F 
Sbjct: 79  TMPHRDTVSWNTMLTA-----------------------------YVHAGDTDTAASLFG 109

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M   D VSWNT+ISG  Q+G +  ++     M R G+     +L   L SC  L  + L
Sbjct: 110 TMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLAL 169

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G QIH   +K GL++DV   +AL+ +Y     L   L+ F  M E + VSW + I     
Sbjct: 170 GVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQ 229

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           +E   +  ++ ++ M+R G   +   + +   + ++        Q+HA  IK   +++  
Sbjct: 230 NEQY-TRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRV 288

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           +  A++  Y K G + D  + F  +     E + N+M+ G +   L  +AM L  FM + 
Sbjct: 289 VGTAIVDVYAKAGNLVDARRAFIGLPHHNVE-TCNAMMVGLVRTGLGAEAMQLFQFMTRS 347

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G   D  + + V SACA V    +G++VH   V++  + DV + +A++D+Y KC  +  A
Sbjct: 348 GVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEA 407

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
              F  M  R+  SWN++I+   ++   +  +   ++M   G  PD  T+  VL AC+  
Sbjct: 408 YLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGL 467

Query: 676 GLVDEGF-KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK----------- 723
             ++ G   H K++    GL   +   S +VD+  + G + + ++  ++           
Sbjct: 468 QSLEYGLVVHGKAIKSGLGLDAFVS--STVVDMYCKCGAITEAQKLHDRIGGQELVSWNS 525

Query: 724 -----------------------MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
                                  M + P+   + TVL  C  AN    ELG++    + +
Sbjct: 526 IISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTC--ANLATIELGKQIHGQIIK 583

Query: 761 MEPQNAVNYV--LLANMYASGGKWED----VAKARK 790
            E      Y+   L +MYA  G   D      KARK
Sbjct: 584 QEMLGD-EYISSTLVDMYAKCGNMPDSLLMFEKARK 618



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 219/473 (46%), Gaps = 58/473 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H   +K+ F+ D  +   +++VY + G+L  A + F  +P  N  +   ++ G   
Sbjct: 271 ARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVR 330

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+  EA ++F+ M R+G   +  +L  V  AC E    G+  G+QVHCL +KS    D 
Sbjct: 331 TGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEV--KGYFQGLQVHCLAVKSGFDVDV 388

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR---GDTISVFKLFSR 180
            V N ++ +YG C    + A  +F+E+E RD +SWN+II+   Q     DTI+       
Sbjct: 389 CVRNAILDLYGKCKALVE-AYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLN---- 443

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
              E  R  ++P+++T+GS++ A  + + S  Y L  +     K+GL  D +V S +V  
Sbjct: 444 ---EMLRSGMEPDDFTYGSVLKAC-AGLQSLEYGL-VVHGKAIKSGLGLDAFVSSTVVDM 498

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG----------------------------- 271
           + + G    A+K+ +++  + +VS N ++ G                             
Sbjct: 499 YCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTY 558

Query: 272 ------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                          GK++HG +I+  +     + + LV+MYAKCG + DS  +F     
Sbjct: 559 ATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARK 618

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQ 378
            D VSWN MI G   +G   EA+  F  M+R  ++ ++ + ++ L +C+ +G +  G Q 
Sbjct: 619 LDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQY 678

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI 430
            H    +  L   +     ++ +   +      L+    MP E D V W +++
Sbjct: 679 FHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLL 731


>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/653 (36%), Positives = 372/653 (56%), Gaps = 67/653 (10%)

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL-DQNGCYEEAIMNFCAMR 349
           V   N ++  + + G ++ +  VF  M  K +V+WN+M++G  ++ G  + A   F  + 
Sbjct: 5   VISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIP 64

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHG---EGLKLGLDS----DVSVSNALLSLY 402
              + S N               IML   +H    E  +L  D     D +  N ++S +
Sbjct: 65  EPDIFSYN---------------IMLACYLHNADVESARLFFDQMPVKDTASWNTMISGF 109

Query: 403 ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
           +  G + +  ++F +MP  + VSWN++I  + +S  L                       
Sbjct: 110 SQNGMMDQARELFLVMPVRNSVSWNAMISGYVESGDL----------------------- 146

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
                             +  Q+ +           A+++ + K G+++  EK F  M  
Sbjct: 147 -----------------DLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMP- 188

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
            ++ V+WN+MI+GYI N      + L   M++ G R +  + ++VL  C++++ L+ G +
Sbjct: 189 MKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQ 248

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
           VH    ++ + +++  G++L+ MY KCG ++ A + F +MP ++V +WN+MISGYA+HG 
Sbjct: 249 VHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGA 308

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
           G+KAL LF +M+ +G  PD +TFV VLSAC+HAG VD G ++F SM + YG+  + + ++
Sbjct: 309 GEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYT 368

Query: 703 CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
           C+VDLLGR G+L +  + I KMP  P+S I+ T+LGA CR + +  EL   AA  L  ++
Sbjct: 369 CVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGA-CRIH-KNLELAEFAAKNLLNLD 426

Query: 763 PQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESH 822
           P++A  YV LAN+YA+  +W+ VA  R++MK+ +V K  G SW+ +K  VH F +GD  H
Sbjct: 427 PESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIH 486

Query: 823 PEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNS- 881
           PE   I+EKL EL +KMR AGYVP  ++AL D+  E K+ ++  HSEK+A+A+ L R   
Sbjct: 487 PELAFIHEKLNELERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPL 546

Query: 882 KLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             PIR+ KNLRVCGDCHSA K+IS I GR I++RD+ RFHHF  G+CSCGDYW
Sbjct: 547 GTPIRVFKNLRVCGDCHSATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 196/413 (47%), Gaps = 34/413 (8%)

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK-LFSRMQREGFRYSLKPNEYTFGS 199
           + A R+FE +  +  ++WNS+++ YS R   I V + LF R+         +P+ +++ +
Sbjct: 22  NSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIP--------EPDIFSY-N 72

Query: 200 LITAAY---SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           ++ A Y   + V S      Q+         + D    + ++SGF++ G    AR++F  
Sbjct: 73  IMLACYLHNADVESARLFFDQMP--------VKDTASWNTMISGFSQNGMMDQARELFLV 124

Query: 257 MIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN-----GLVNMYAKCGTIDDSR 311
           M  +N VS N ++ G  +  ++    +   LF++  V +      ++  + K G I+ + 
Sbjct: 125 MPVRNSVSWNAMISGYVESGDLD---LAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAE 181

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
             F  M  K+ V+WN MI+G  +N   E  +  F  M   G   +  SL S L  C++L 
Sbjct: 182 KYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLS 241

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
            + LG+Q+H    K  +  +++   +LLS+Y   G L    K+F +MP+ D V+WN++I 
Sbjct: 242 ALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMIS 301

Query: 432 AFADSEALVSEAVKYYLD-MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YN 489
            +A   A   E   Y  D MR  G  P+ +TF+ +L+A +      LG +    +++ Y 
Sbjct: 302 GYAQHGA--GEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYG 359

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
           V  +      ++   G+ G++ +   +  +M  +     + +++    IH  L
Sbjct: 360 VEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNL 412



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/444 (22%), Positives = 188/444 (42%), Gaps = 99/444 (22%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK-GMSNEACKMFKEM 77
           +V   N +I  ++R GDL SA ++F+ M  + +V+W  +++GY+++ G    A ++F  +
Sbjct: 4   NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI 63

Query: 78  VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
                                  P  F + + + C +  ++                   
Sbjct: 64  PE---------------------PDIFSYNIMLACYLHNAD------------------- 83

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
              + AR  F+++  +D  SWN++IS +SQ G      +LF  M           N  ++
Sbjct: 84  --VESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVR--------NSVSW 133

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            ++I+     V SG   L + L  V     +  +   +A+++GF + G    A K FE+M
Sbjct: 134 NAMISG---YVESGDLDLAKQLFEVAP---VRSVVAWTAMITGFMKFGKIELAEKYFEEM 187

Query: 258 IQKNVVSMNGLMEGR-----------------------------------------RKGK 276
             KN+V+ N ++ G                                          + GK
Sbjct: 188 PMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGK 247

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           +VH  + +S +   +  G  L++MY KCG ++D+  +F  M  KD V+WN MISG  Q+G
Sbjct: 248 QVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHG 307

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVS 395
             E+A+  F  MR +G+     + ++ LS+C   G++ LG +     ++  G+++     
Sbjct: 308 AGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHY 367

Query: 396 NALLSLYADAGYLSRCLKVFFLMP 419
             ++ L    G L   + +   MP
Sbjct: 368 TCVVDLLGRGGKLVEAVDLIKKMP 391



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 7/194 (3%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           Q+ +      V     +I  +++ G +  A K F+EMP +N V+W  +++GY     +  
Sbjct: 151 QLFEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAEN 210

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
             K+FK MV +GF  N  +L SVL  C     S  K G QVH L+ KS  +++      L
Sbjct: 211 GLKLFKRMVESGFRPNPSSLSSVLLGCSNL--SALKLGKQVHQLICKSPVSWNITAGTSL 268

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           ++MY  C +  D A ++F  +  +D+++WN++IS Y+Q G       LF +M+ EG    
Sbjct: 269 LSMYCKCGDLED-AWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEG---- 323

Query: 190 LKPNEYTFGSLITA 203
           +KP+  TF ++++A
Sbjct: 324 MKPDWITFVAVLSA 337



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  I K   ++++    +L+++Y + GDL  A KLF  MP ++ V+W  ++SGY
Sbjct: 244 KLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGY 303

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   +A  +F +M   G   +     +VL AC   G
Sbjct: 304 AQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAG 342



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 19/205 (9%)

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA-RHGHGDKALTLFSQM 653
           +V+  + ++  + + G ++ A R F+ M V+   +WNSM++GY+ R G    A  LF ++
Sbjct: 4   NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI 63

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGE 713
               P PD  ++  +L+   H   V+     F  M      +     ++ M+    + G 
Sbjct: 64  ----PEPDIFSYNIMLACYLHNADVESARLFFDQMP-----VKDTASWNTMISGFSQNGM 114

Query: 714 LDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLA 773
           +D+  E    MP+  NS+ W  ++     +           A  LFE+ P  +V  V   
Sbjct: 115 MDQARELFLVMPVR-NSVSWNAMISGYVESG------DLDLAKQLFEVAPVRSV--VAWT 165

Query: 774 NMYASGGKWEDVAKARKAMKEAEVK 798
            M     K+  +  A K  +E  +K
Sbjct: 166 AMITGFMKFGKIELAEKYFEEMPMK 190


>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/669 (35%), Positives = 359/669 (53%), Gaps = 57/669 (8%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT-----IDDSRSVFRFMIGKDSVSWNTMIS 330
           K+ H  ++R+G      +   LV  YA   T      + S  VF F+   +   WN MI 
Sbjct: 52  KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 111

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
              +N    +AI+ +  M       + ++  + L +C+  G +  G Q+H   +K GL  
Sbjct: 112 VCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGG 171

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           D  + ++ + +YA  G L    ++      E D V WN++I  +                
Sbjct: 172 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGY---------------- 215

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE--NALLSCYGKC 507
                     + F  + AA   F                 + + + I   NA++S + +C
Sbjct: 216 ----------LRFGEVEAARELFE---------------GMPDRSMISTWNAMISGFSRC 250

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
           G ++   + F  M ER DE+SW++MI GYI      +A+ +   M +   R   F   +V
Sbjct: 251 GMVEVAREFFDEMKER-DEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSV 309

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           LSACA++  L++G  +H    R  ++ D V+G++LVDMY+KCGRID A   F+ M  + V
Sbjct: 310 LSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEV 369

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            SWN+MI G A HG  + A+ LFS+M +    P+ +TFVGVL+AC+H GLV +G   F S
Sbjct: 370 SSWNAMIGGLAMHGRAEDAIDLFSKMDI---YPNEITFVGVLNACAHGGLVQKGLTIFNS 426

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           M + YG+ PQ+E + C+VDLLGRAG L + E+ ++ +P  P   +W  +LGAC +     
Sbjct: 427 MRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHG--N 484

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
            ELG +   +L E+EPQN+  Y LL+N+YA  G+WE+V + RK MKE  +K   G S + 
Sbjct: 485 VELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIID 544

Query: 808 MKDG-VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSY 866
           +  G VH F+ GD SHP+   IY+ L ++ ++++  GY P     LFD++ E KE  V  
Sbjct: 545 LGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQ 604

Query: 867 HSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFND 925
           HSEK+A+ F L   S    IRI+KNLRVC DCHSA K IS++  REI++RD  R+HHF +
Sbjct: 605 HSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRN 664

Query: 926 GKCSCGDYW 934
           G CSC D+W
Sbjct: 665 GACSCKDFW 673



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 206/434 (47%), Gaps = 19/434 (4%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLE----STDCARRIFEEIETRDLISWNSIISV 164
           Q H L+L++    D  ++  L+  Y +       S + + R+F+ +   ++  WN +I V
Sbjct: 53  QAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKV 112

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
             +  +      L+  M     R    PN+YT+ +++ A   S +    +  Q+ A + K
Sbjct: 113 CIENNEPFKAILLYYEMVVAHSR----PNKYTYPAVLKACSDSGVVAEGV--QVHAHLVK 166

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFE-QMIQKNVVSMNGLMEGRRKGKEVHGYL- 282
            GL  D ++ S+ +  +A  G    AR+I + +  + + V  N +++G  +  EV     
Sbjct: 167 HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARE 226

Query: 283 IRSGLFD--MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
           +  G+ D  M++  N +++ +++CG ++ +R  F  M  +D +SW+ MI G  Q GC+ E
Sbjct: 227 LFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFME 286

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A+  F  M+++ +    F L S LS+CA+LG +  G+ IH    +  +  D  +  +L+ 
Sbjct: 287 ALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVD 346

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +YA  G +    +VF  M   +  SWN++IG  A       +A+  +  M      PN +
Sbjct: 347 MYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLA-MHGRAEDAIDLFSKM---DIYPNEI 402

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           TF+ +L A +   + + G  +   + K Y V  +      ++   G+ G + + EK+ + 
Sbjct: 403 TFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSS 462

Query: 520 MSERRDEVSWNSMI 533
           +        W +++
Sbjct: 463 IPTEPTPAVWGALL 476



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 205/452 (45%), Gaps = 49/452 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVG-----DLASASKLFDEMPDRNSVSWACIVS 59
           K  H  IL+ G   D ++  +L+  Y  V         S+ ++FD +   N   W C++ 
Sbjct: 52  KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 111

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
                    +A  ++ EMV A    N+Y   +VL+AC + G      G+QVH  ++K   
Sbjct: 112 VCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGV--VAEGVQVHAHLVKHGL 169

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR-DLISWNSIISVYSQRGDTISVFKLF 178
             DG + +  I MY S     + ARRI ++     D + WN++I  Y + G+  +  +LF
Sbjct: 170 GGDGHILSSAIRMYASFGRLVE-ARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELF 228

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG------SYLLQQILAMVKKAGLLSDLY 232
             M          P+     S+I+  +++++SG        + ++    +K+   +S   
Sbjct: 229 EGM----------PDR----SMIS-TWNAMISGFSRCGMVEVAREFFDEMKERDEIS--- 270

Query: 233 VGSALVSGFARLGNFYYARKIFEQM----------IQKNVVSMNGLMEGRRKGKEVHGYL 282
             SA++ G+ + G F  A +IF QM          +  +V+S    +    +G+ +H Y 
Sbjct: 271 -WSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYA 329

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
            R+ +     +G  LV+MYAKCG ID +  VF  M  K+  SWN MI GL  +G  E+AI
Sbjct: 330 KRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAI 389

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSL 401
             F  M    +  +  + +  L++CA  G +  G  I     K  G++  +     ++ L
Sbjct: 390 DLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDL 446

Query: 402 YADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
              AG L+   KV   +P E     W +++GA
Sbjct: 447 LGRAGLLTEAEKVVSSIPTEPTPAVWGALLGA 478



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 138/301 (45%), Gaps = 19/301 (6%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N +I+ + R G +  A + FDEM +R+ +SW+ ++ GY  +G   EA ++F +M +    
Sbjct: 241 NAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIR 300

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
             ++ L SVL AC   G      G  +H    +++   DG++   L+ MY  C    D A
Sbjct: 301 PRKFVLPSVLSACANLG--ALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKC-GRIDLA 357

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF-GSLIT 202
             +FE++  +++ SWN++I   +  G       LFS+M        + PNE TF G L  
Sbjct: 358 WEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM-------DIYPNEITFVGVLNA 410

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
            A+  ++     L    +M K+ G+   +     +V    R G    A K+   +  +  
Sbjct: 411 CAHGGLVQKG--LTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPT 468

Query: 263 VSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFRF 316
            ++ G + G  R+ G    G  +   L ++    +G    L N+YAK G  ++   V + 
Sbjct: 469 PAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKL 528

Query: 317 M 317
           M
Sbjct: 529 M 529



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 117/297 (39%), Gaps = 48/297 (16%)

Query: 538 HNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
           H+ L+PK  +          +L H     +L+   +  +L    + HA  +R     D  
Sbjct: 16  HHHLIPKGHS------TETSKLSHKAILHLLNTQCTT-SLHHLKQAHALILRTGHLQDSY 68

Query: 598 IGSALVDMYSKCGRIDYAS-----RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
           I  +LV  Y+      Y S     R FD +   NV+ WN MI     +    KA+ L+ +
Sbjct: 69  IAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYE 128

Query: 653 MKLDGPLPDHVTFVGVLSACSHAGLVDEGF-------KH--------FKSMSQVYGLIPQ 697
           M +    P+  T+  VL ACS +G+V EG        KH          S  ++Y    +
Sbjct: 129 MVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGR 188

Query: 698 LEQ----------------FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACC 741
           L +                ++ M+D   R GE++   E    MP       W  ++    
Sbjct: 189 LVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFS 248

Query: 742 RANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVK 798
           R  C   E+ R+      EM+ ++ +++  + + Y   G + +  +    M++ +++
Sbjct: 249 R--CGMVEVARE---FFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIR 300


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/633 (37%), Positives = 359/633 (56%), Gaps = 15/633 (2%)

Query: 235 SALVSGFARLGNFYYARKIFEQM-------IQKNVVSMN----GLMEGRRKGKEVHGYLI 283
           + L+SG+    +   A  +F+ M       I   ++S+     GL      G+ +HGY +
Sbjct: 84  TTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAV 143

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
           ++GL + V VG+ L++MY K G I + R VF  M  ++ VSW  +I+GL + G  +EA++
Sbjct: 144 KTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALV 203

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            F  M R  +   +++    L +CA  G +  G++IH + +K G D    V+N L ++Y 
Sbjct: 204 YFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYN 263

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
             G L   L +F  M   D VSW ++I            AV+ ++ MR +  SPN  TF 
Sbjct: 264 KCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQM-GQEECAVQAFIRMRESDVSPNEYTFA 322

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
            +++  ++ +  + G Q+HA ++   +A   ++EN++++ Y KCG++     IF  M+ R
Sbjct: 323 AVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMT-R 381

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
           RD VSW+++I+GY     + +A  L+ +M   G +   F  A+VLSAC ++A LE G ++
Sbjct: 382 RDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQL 441

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           HA  +   LE   ++ SAL++MY KCG I+ ASR FD     ++ SW +MI+GYA HG+ 
Sbjct: 442 HAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYS 501

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC 703
            + + LF ++   G  PD VTF+GVLSACSHAGLVD GF +F +MS+ Y + P  E + C
Sbjct: 502 REVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGC 561

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP 763
           M+DLL RAG L   E  I  MP   + ++W T+L A CR +    E GR+ A  + ++EP
Sbjct: 562 MIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRA-CRVHG-DVERGRRTAERILQLEP 619

Query: 764 QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHP 823
             A  ++ LAN+YAS GKW + A  RK MK   V KE G SW+ +KD V  FVAGD SHP
Sbjct: 620 NCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHP 679

Query: 824 EKDLIYEKLKELNQKMRDAGYVPQTKFALFDLE 856
           + + IY  L  L  +   A  V +T F  +DLE
Sbjct: 680 QGEDIYNMLDLLASRTELADCVQETGFLPYDLE 712



 Score =  212 bits (539), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 259/562 (46%), Gaps = 61/562 (10%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM- 77
           D+   N  +   V+ G L +A ++FD+M  ++ +SW  ++SGY +   S+EA  +FK M 
Sbjct: 48  DLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR 107

Query: 78  VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY---G 134
           V +G  ++ + L    +AC     S   +G  +H   +K+       V + L+ MY   G
Sbjct: 108 VESGLRIDPFILSLAHKACGL--NSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNG 165

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
              E     RR+F E+  R+++SW +II+   + G        FS M R    Y    + 
Sbjct: 166 KIFE----GRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEY----DS 217

Query: 195 YTFG-SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKI 253
           YTF  +L   A S  L+     ++I A   K G     +V + L + + + G   Y   +
Sbjct: 218 YTFAIALKACADSGALNYG---REIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTL 274

Query: 254 FEQMIQKNVVSMNGLME-----GRRK---------------------------------- 274
           FE+M  ++VVS   ++      G+ +                                  
Sbjct: 275 FEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARI 334

Query: 275 --GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
             G+++H  ++  GL   ++V N ++ MYAKCG +  S  +F  M  +D VSW+T+I+G 
Sbjct: 335 EWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGY 394

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            Q G   EA      MR +G   + F+L S LS+C ++  +  G+Q+H   L +GL+   
Sbjct: 395 XQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTA 454

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V +AL+++Y   G +    ++F      D VSW ++I  +A+      E +  +  + R
Sbjct: 455 MVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAE-HGYSREVIDLFEKIPR 513

Query: 453 AGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
            G  P+ VTFI +L+A S   +  LG H  +A   KY ++        ++    + G + 
Sbjct: 514 VGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLS 573

Query: 512 DCEKIFARMSERRDEVSWNSMI 533
           D E +   M   RD+V W++++
Sbjct: 574 DAEHMIEAMPFHRDDVVWSTLL 595



 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 210/415 (50%), Gaps = 4/415 (0%)

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR-RDGLMSSNFSLI 361
           K G + ++R +F  M  KD +SW T+ISG        EA++ F  MR   GL    F L 
Sbjct: 61  KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
               +C     +  G+ +HG  +K GL + V V +ALL +Y   G +    +VF  MP  
Sbjct: 121 LAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR 180

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           + VSW ++I     +     EA+ Y+ +M R+    +  TF   L A +       G ++
Sbjct: 181 NVVSWTAIITGLVRA-GYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREI 239

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           HAQ +K      + + N L + Y KCG+++    +F +MS  RD VSW ++I+  +    
Sbjct: 240 HAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMS-MRDVVSWTTIITTLVQMGQ 298

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
              A+     M +     + +TFA V+S CA++A +E G ++HA  +   L   + + ++
Sbjct: 299 EECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENS 358

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           ++ MY+KCG++  +S  F  M  R++ SW+++I+GY + GH  +A  L S M+++GP P 
Sbjct: 359 IMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPT 418

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
                 VLSAC +  +++ G K   +     GL       S ++++  + G +++
Sbjct: 419 EFALASVLSACGNMAILEHG-KQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEE 472



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 217/471 (46%), Gaps = 52/471 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +L H   +K G    VF+ + L+++Y + G +    ++F EMP RN VSW  I++G    
Sbjct: 136 ELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRA 195

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G + EA   F EM R+    + Y     L+AC + G     +G ++H   +K        
Sbjct: 196 GYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSG--ALNYGREIHAQAMKKGFDVSSF 253

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V+N L  MY  C    +    +FE++  RD++SW +II+   Q G      + F RM+  
Sbjct: 254 VANTLATMYNKC-GKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRES 312

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                + PNEYTF ++I+   +  L+     +Q+ A++   GL + L V +++++ +A+ 
Sbjct: 313 ----DVSPNEYTFAAVISGCAN--LARIEWGEQLHALILHLGLAASLSVENSIMTMYAKC 366

Query: 245 GNFYYARKIFEQMIQKNVVSMNGL---------------------MEGRRK--------- 274
           G    +  IF +M ++++VS + +                     MEG +          
Sbjct: 367 GQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVL 426

Query: 275 -----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      GK++H Y++  GL     V + L+NMY KCG+I+++  +F      D V
Sbjct: 427 SACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIV 486

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGE 382
           SW  MI+G  ++G   E I  F  + R GL   + + I  LS+C+  G + LG    +  
Sbjct: 487 SWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAM 546

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH-DQVSWNSVIGA 432
             K  +         ++ L   AG LS    +   MP H D V W++++ A
Sbjct: 547 SKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRA 597



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 173/355 (48%), Gaps = 15/355 (4%)

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           +D+  SN  L      G+L    ++F  M + D++SW ++I  + ++    SEA+  + +
Sbjct: 47  TDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNAND-SSEALLLFKN 105

Query: 450 MR-RAGWSPNGVTFINILA--AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
           MR  +G   +   FI  LA  A    S    G  +H   +K  + N   + +ALL  Y K
Sbjct: 106 MRVESGLRID--PFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTK 163

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWF--MMQRGQRLDHFTF 564
            G++ +  ++F  M   R+ VSW ++I+G +      +A  LV+F  M +     D +TF
Sbjct: 164 NGKIFEGRRVFHEMP-MRNVVSWTAIITGLVRAGYNKEA--LVYFSEMWRSRVEYDSYTF 220

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
           A  L ACA    L  G E+HA  ++   +    + + L  MY+KCG+++Y    F+ M +
Sbjct: 221 AIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSM 280

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           R+V SW ++I+   + G  + A+  F +M+     P+  TF  V+S C++   ++ G + 
Sbjct: 281 RDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWG-EQ 339

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI-WRTVLG 738
             ++    GL   L   + ++ +  + G+L       ++M  T   ++ W T++ 
Sbjct: 340 LHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEM--TRRDIVSWSTIIA 392



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 6/197 (3%)

Query: 556 GQRLDHFTFATVLSA-CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
           G+RL  FT   V S  C  +  LER  +  +  +    + D+   +  +    K G +  
Sbjct: 10  GRRL--FTAPAVASTECIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGN 67

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP-DHVTFVGVLSACS 673
           A R FD M  ++  SW ++ISGY       +AL LF  M+++  L  D         AC 
Sbjct: 68  ARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACG 127

Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
               V+ G +     +   GL+  +   S ++D+  + G++ +     ++MP+  N + W
Sbjct: 128 LNSDVNYG-ELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR-NVVSW 185

Query: 734 RTVLGACCRANCRKTEL 750
             ++    RA   K  L
Sbjct: 186 TAIITGLVRAGYNKEAL 202


>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 1131

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 270/846 (31%), Positives = 426/846 (50%), Gaps = 91/846 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  + K GF +  F    LI++Y +  +L  A  +FD   + ++VSW  +++GY  
Sbjct: 161 GKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVR 220

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   EA K+F +M R G + ++ AL +V+ A                            
Sbjct: 221 DGFPMEAVKVFDKMQRVGHVPDQIALVTVINA---------------------------- 252

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
                    Y +     D AR++F +I   ++++WN +IS +++RG        F  +++
Sbjct: 253 ---------YVALGRLAD-ARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKK 302

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G    LK    + GS+++A  S  LS       + A   K GL  ++YVGSALV+ +A+
Sbjct: 303 TG----LKATRSSLGSVLSAIAS--LSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAK 356

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRKGKE--------- 277
                 A+++F  + ++N+V  N ++ G                 +R G +         
Sbjct: 357 CSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSI 416

Query: 278 ---------------VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                          +H  +I++     + V N LV+MYAK G + ++R  F FM   D+
Sbjct: 417 FSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDN 476

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           VSWN +I G  Q    +EA   F  M  +G++    SL S +S+CA++     GQQ H  
Sbjct: 477 VSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCL 536

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            +K+GLD+     ++L+ +Y   G +     VF+ MP  + VS N++I  +  S   + E
Sbjct: 537 LVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSH--LEE 594

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN-VANETTIENALL 501
           A+  + +++  G  P  VTF  +L       M  LG Q+H QV+K+  +++   +  +LL
Sbjct: 595 AIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLL 654

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
             Y       D E +F+ +   +  V W ++ISGY       KA+     M       D 
Sbjct: 655 CMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQ 714

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
            TFA+VL ACA +++L+ G EVH+         D +  S+L+DMY+KCG +  + + F  
Sbjct: 715 ATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHE 774

Query: 622 MPVRN-VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
           MP RN V SWNSMI G A++G+ ++AL +F QM+    +PD VTF+GVLSACSHAG V E
Sbjct: 775 MPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSE 834

Query: 681 GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC 740
           G K F  M   Y L P+++   CMVD+LGR G L++ EEFINK+    + ++W T+LGA 
Sbjct: 835 GRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGA- 893

Query: 741 CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKE 800
           CR +  +   G++AAN L E++PQ++ +YVLL+ +YA    W      R+ MK   VKK 
Sbjct: 894 CRKHGDEVR-GKRAANKLMELKPQSSSSYVLLSGLYAESENWSGADSLRREMKLKGVKKL 952

Query: 801 AGCSWV 806
            G SW+
Sbjct: 953 PGYSWI 958



 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 220/784 (28%), Positives = 366/784 (46%), Gaps = 50/784 (6%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK+ H + LK G      L N ++++YV+ G++  A K F  +  ++  +W  ++S Y  
Sbjct: 60  AKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLD 119

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+     + F  M   G   N +    VL AC   G     +G QVHC V K    F  
Sbjct: 120 HGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACS--GLQDINYGKQVHCGVFKMGFGFRS 177

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
                LI MY  C    D AR +F+     D +SW ++I+ Y + G  +   K+F +MQR
Sbjct: 178 FCQGGLIDMYAKCRNLRD-ARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQR 236

Query: 184 EGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            G      P++    ++I A  A   +     L  QI           ++   + ++SG 
Sbjct: 237 VGH----VPDQIALVTVINAYVALGRLADARKLFTQIPN--------PNVVAWNVMISGH 284

Query: 242 ARLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMV 291
           A+ G    A   F ++ +           +V+S    +     G  VH   I+ GL D V
Sbjct: 285 AKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNV 344

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
            VG+ LVNMYAKC  +D ++ VF  +  ++ V WN M+ G  QNG  +E +  F  M+R 
Sbjct: 345 YVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRH 404

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G     F+  S  S+CASL ++  G Q+H   +K    S++ V+NAL+ +YA +G L   
Sbjct: 405 GPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEA 464

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
            K F  M  HD VSWN++I  +   E    EA   +  M   G  P+ V+  +I++A ++
Sbjct: 465 RKQFEFMKIHDNVSWNAIIVGYVQEE-YNDEAFFMFRRMVSNGVLPDEVSLASIVSACAN 523

Query: 472 FSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
               K G Q H  ++K  +   T   ++L+  Y KCG +     +F  M   R+ VS N+
Sbjct: 524 VKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSM-PYRNVVSINA 582

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR-A 590
           +I+GY  +  L +A++L   +   G +    TFA +L  C     L  G ++H   ++  
Sbjct: 583 LIAGYTMSH-LEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWG 641

Query: 591 CLEFDVVIGSALVDMYSKCGRI-DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
            L    ++  +L+ MY    R  D  + F +L   + +  W ++ISGYA+  H +KAL  
Sbjct: 642 FLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQF 701

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ----LEQFSC-- 703
           +  M+ D  LPD  TF  VL AC+       G    ++  +V+ LI      +++ +C  
Sbjct: 702 YQHMRSDNILPDQATFASVLRACA-------GMSSLQTGQEVHSLIFHTGFNMDEITCSS 754

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP 763
           ++D+  + G++    +  ++MP   + + W +++         K     +A  +  +ME 
Sbjct: 755 LIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMI-----VGLAKNGYAEEALEIFKQMEQ 809

Query: 764 QNAV 767
           Q+ +
Sbjct: 810 QSII 813



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 220/470 (46%), Gaps = 39/470 (8%)

Query: 268 LMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
           +++     K +H   ++ G+     +GN +V++Y KCG +D ++  F  +  KD  +WN+
Sbjct: 53  VLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNS 112

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           ++S    +G +   + +F  M   G+  + F+    LS+C+ L  I  G+Q+H    K+G
Sbjct: 113 VLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMG 172

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
                     L+ +YA    L     VF      D VSW ++I  +   +    EAVK +
Sbjct: 173 FGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYV-RDGFPMEAVKVF 231

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
             M+R G  P+ +  + ++ A                                   Y   
Sbjct: 232 DKMQRVGHVPDQIALVTVINA-----------------------------------YVAL 256

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
           G + D  K+F ++    + V+WN MISG+       +A++    + + G +    +  +V
Sbjct: 257 GRLADARKLFTQI-PNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSV 315

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           LSA AS++ L  G  VHA  ++  L+ +V +GSALV+MY+KC ++D A + F+ +  RN+
Sbjct: 316 LSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNI 375

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
             WN+M+ G+A++G   + +  FS MK  GP PD  TF  + SAC+    +D G +    
Sbjct: 376 VLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTV 435

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
           M +       L   + +VD+  ++G L +  +    M I  N + W  ++
Sbjct: 436 MIK-NKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDN-VSWNAII 483



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 154/328 (46%), Gaps = 23/328 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H  ++K G        ++LI++YV+ G + +A  +F  MP RN VS   +++GY
Sbjct: 528 KQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGY 587

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN-QT 120
           T   +  EA  +F+E+   G          +L  C   G      G Q+H  V+K    +
Sbjct: 588 TMSHLE-EAIHLFQEIQMVGLKPTEVTFAGLLDGCD--GAFMLNLGRQIHGQVMKWGFLS 644

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIE-TRDLISWNSIISVYSQRGDTISVFKLFS 179
              +V   L+ MY +     D +  +F E++  + L+ W ++IS Y+Q+       + + 
Sbjct: 645 SSEMVCVSLLCMYMNSQRFAD-SETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQ 703

Query: 180 RMQREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
            M+ +    ++ P++ TF S++   A  SS+ +G    Q++ +++   G   D    S+L
Sbjct: 704 HMRSD----NILPDQATFASVLRACAGMSSLQTG----QEVHSLIFHTGFNMDEITCSSL 755

Query: 238 VSGFARLGNFYYARKIFEQMIQKN-VVSMNGLMEGRRKGK------EVHGYLIRSGLFDM 290
           +  +A+ G+   + ++F +M ++N V+S N ++ G  K        E+   + +  +   
Sbjct: 756 IDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPD 815

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                G+++  +  G + + R VF  M+
Sbjct: 816 EVTFLGVLSACSHAGRVSEGRKVFDLMV 843



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 12/130 (9%)

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           A +  L     +H+  ++  +    ++G+ +VD+Y KCG +D+A + F  +  ++V++WN
Sbjct: 52  AVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWN 111

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-----------HAGLVDE 680
           S++S Y  HG     +  F  M   G  P+  TF  VLSACS           H G+   
Sbjct: 112 SVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKM 171

Query: 681 GFKHFKSMSQ 690
           GF  F+S  Q
Sbjct: 172 GFG-FRSFCQ 180


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 271/788 (34%), Positives = 422/788 (53%), Gaps = 76/788 (9%)

Query: 131 AMYGSCLESTDC-------ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           ++  SC+ + D        AR I  +IE  D + +NS+IS+YS+ GD+     +F  M+R
Sbjct: 67  SLLKSCIRARDFRLGKLVHARLIEFDIEP-DSVLYNSLISLYSKSGDSAKAEDVFETMRR 125

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G R                                          D+   SA+++ +  
Sbjct: 126 FGKR------------------------------------------DVVSWSAMMACYGN 143

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------GKEVHGYLIRSGLFDM-VA 292
            G    A K+F + ++  +V  +       +          G+   G+L+++G F+  V 
Sbjct: 144 NGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVC 203

Query: 293 VGNGLVNMYAKC-GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           VG  L++M+ K   + +++  VF  M   + V+W  MI+   Q G   EAI  F  M   
Sbjct: 204 VGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLS 263

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA---GYL 408
           G  S  F+L S  S+CA L  + LG+Q+H   ++ GL  DV  S  L+ +YA     G +
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSV 321

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW-SPNGVTFINILA 467
             C KVF  M +H  +SW ++I  +  +  L +EA+  + +M   G   PN  TF +   
Sbjct: 322 DDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFK 381

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
           A  + S  ++G QV  Q  K  +A+ +++ N+++S + K   M+D ++ F  +SE+ + V
Sbjct: 382 ACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK-NLV 440

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           S+N+ + G   N    +A  L+  + +R   +  FTFA++LS  A+V ++ +G ++H+  
Sbjct: 441 SYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQV 500

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
           V+  L  +  + +AL+ MYSKCG ID ASR F+ M  RNV SW SMI+G+A+HG   + L
Sbjct: 501 VKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVL 560

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDL 707
             F+QM  +G  P+ VT+V +LSACSH GLV EG++HF SM + + + P++E ++CMVDL
Sbjct: 561 ETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDL 620

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAV 767
           L RAG L    EFIN MP   + L+WRT LGA CR +   TELG+ AA  + E++P    
Sbjct: 621 LCRAGLLTDAFEFINTMPFQADVLVWRTFLGA-CRVH-SNTELGKLAARKILELDPNEPA 678

Query: 768 NYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDL 827
            Y+ L+N+YA  GKWE+  + R+ MKE  + KE GCSW+ + D +H F  GD +HP    
Sbjct: 679 AYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQ 738

Query: 828 IYEKLKELNQKMRDAGYVPQTKFALFDLEPESKED----LVSYHSEKIAVAFVLTRNSK- 882
           IY++L  L  +++  GYVP T   L  LE E+ E     L+  HSEKIAVAF L   SK 
Sbjct: 739 IYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKS 798

Query: 883 LPIRIMKN 890
            P+++++ 
Sbjct: 799 RPLKMIQT 806



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 225/477 (47%), Gaps = 71/477 (14%)

Query: 11  ILKHG-FAYDVFLCNTLINVYVR-VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSN 68
           ++K G F  DV +  +LI+++V+      +A K+FD+M + N V+W  +++     G   
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251

Query: 69  EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV 128
           EA + F +MV +GF  +++ L SV  AC E        G Q+H   ++S     GLV +V
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAEL--ENLSLGKQLHSWAIRS-----GLVDDV 304

Query: 129 ---LIAMYGSCLE--STDCARRIFEEIETRDLISWNSIISVYSQRGD-TISVFKLFSRMQ 182
              L+ MY  C    S D  R++F+ +E   ++SW ++I+ Y +  +       LFS M 
Sbjct: 305 ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMI 364

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            +G    ++PN +TF S   A  +  LS   + +Q+L    K GL S+  V ++++S F 
Sbjct: 365 TQG---HVEPNHFTFSSAFKACGN--LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFV 419

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------------ 272
           +      A++ FE + +KN+VS N  ++G                               
Sbjct: 420 KSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFAS 479

Query: 273 -----------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                      RKG+++H  +++ GL     V N L++MY+KCG+ID +  VF FM  ++
Sbjct: 480 LLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRN 539

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA-----SLGWIMLG 376
            +SW +MI+G  ++G     +  F  M  +G+  +  + ++ LS+C+     S GW    
Sbjct: 540 VISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFN 599

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                  +K  ++        ++ L   AG L+   +    MP + D + W + +GA
Sbjct: 600 SMYEDHKIKPKMEHYA----CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 240/516 (46%), Gaps = 61/516 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP---DRNSVSWACIVSGY 61
           KL H ++++     D  L N+LI++Y + GD A A  +F+ M     R+ VSW+ +++ Y
Sbjct: 82  KLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACY 141

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-T 120
            + G   +A K+F E +  G + N Y   +V+RAC      G   G      ++K+    
Sbjct: 142 GNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG--VGRVTLGFLMKTGHFE 199

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D  V   LI M+     S + A ++F+++   ++++W  +I+   Q G      + F  
Sbjct: 200 SDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLD 259

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M   GF    + +++T  S+ +A   + L    L +Q+ +   ++GL+ D  V  +LV  
Sbjct: 260 MVLSGF----ESDKFTLSSVFSAC--AELENLSLGKQLHSWAIRSGLVDD--VECSLVDM 311

Query: 241 FARL---GNFYYARKIFEQMIQKNVVSMNGLMEG-------------------------- 271
           +A+    G+    RK+F++M   +V+S   L+ G                          
Sbjct: 312 YAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEP 371

Query: 272 -----------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                             R GK+V G   + GL    +V N +++M+ K   ++D++  F
Sbjct: 372 NHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAF 431

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             +  K+ VS+NT + G  +N  +E+A      +    L  S F+  S LS  A++G I 
Sbjct: 432 ESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIR 491

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
            G+QIH + +KLGL  +  V NAL+S+Y+  G +    +VF  M   + +SW S+I  FA
Sbjct: 492 KGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFA 551

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
                    ++ +  M   G  PN VT++ IL+A S
Sbjct: 552 -KHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 586



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 55/99 (55%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H Q++K G + +  +CN LI++Y + G + +AS++F+ M +RN +SW  +++G+
Sbjct: 491 RKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGF 550

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G +    + F +M+  G   N     ++L AC   G
Sbjct: 551 AKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 589


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/546 (41%), Positives = 331/546 (60%), Gaps = 8/546 (1%)

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           D+   N ++S YA+ G + +  K+F  MP  D  SWN+VI  +  S+    EA+  +  M
Sbjct: 128 DLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYV-SQGWYMEALDLFRMM 186

Query: 451 RRAGWSP-NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           +    S  N  T  + LAAA++ S  + G ++H  +I+  +  +  +  ALL  YGKCG 
Sbjct: 187 QENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGS 246

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           +++   IF +M+++ D VSW +MI     +    +  +L   +M  G R + +TFA VL+
Sbjct: 247 LNEARGIFDQMADK-DIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLN 305

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           ACA +A  + G EVH    R   +      SALV +YSKCG  + A R F+ MP  ++ S
Sbjct: 306 ACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVS 365

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           W S+I GYA++G  D AL  F  +   G  PD +TFVGVLSAC+HAGLVD G ++F S+ 
Sbjct: 366 WTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVK 425

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKT 748
           + +GL+   + ++C++DLL R+G   + E  I+ MP+ P+  +W ++LG C    N    
Sbjct: 426 EKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGN---I 482

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
           EL  +AA  LFE+EP+N   Y+ L+N+YA+ G W +  K R  M    + K+ G SW+ +
Sbjct: 483 ELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEI 542

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
           K  VHVF+ GD SHP+   I+E L EL++KM++ GYV  T F L D+E E KE  + YHS
Sbjct: 543 KRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHS 602

Query: 869 EKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGK 927
           EK+AVAF +++ +   PI++ KNLR C DCH+A K+ISKIV R+I++RDSNRFH F DG 
Sbjct: 603 EKLAVAFGIISTSPGTPIKVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFVDGS 662

Query: 928 CSCGDY 933
           CSC DY
Sbjct: 663 CSCKDY 668



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 178/385 (46%), Gaps = 56/385 (14%)

Query: 206 SSVLSGSYLLQQILAMVKKAGLL------------SDLYVGSALVSGFARLGNFYYARKI 253
           S+ + G  +  +++ M  K G L             DL   + ++SG+A +G    ARK+
Sbjct: 92  SNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKL 151

Query: 254 FEQMIQKNVVSMNGLMEG------------------------------------------ 271
           F++M  ++  S N ++ G                                          
Sbjct: 152 FDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISS 211

Query: 272 RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
            R+GKE+HGYLIRSGL     V   L+++Y KCG+++++R +F  M  KD VSW TMI  
Sbjct: 212 LRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHR 271

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
             ++G  +E    F  +   G+  + ++    L++CA L    +G+++HG   ++G D  
Sbjct: 272 CFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPF 331

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
              ++AL+ +Y+  G      +VF  MP  D VSW S+I  +A +      A++++  + 
Sbjct: 332 SFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQN-GQPDMALQFFESLL 390

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEM 510
           R+G  P+ +TF+ +L+A +   +  +G +  H+   K+ + +       ++    + G  
Sbjct: 391 RSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRF 450

Query: 511 DDCEKIFARMSERRDEVSWNSMISG 535
            + E I   M  + D+  W S++ G
Sbjct: 451 KEAENIIDNMPMKPDKFLWASLLGG 475



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 172/398 (43%), Gaps = 70/398 (17%)

Query: 104 FKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS 163
            + G +VH     SN     ++SN LI MY  C    D A+ +F+EI  +DL SWN++IS
Sbjct: 79  LELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVD-AQMLFDEIPQKDLCSWNTMIS 137

Query: 164 VYSQRGDTISVFKLFSRM-QREGFRYS---------------------LKPNEYTFGSLI 201
            Y+  G      KLF  M  R+ F ++                     ++ NE +  ++ 
Sbjct: 138 GYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMF 197

Query: 202 TAAYSSVLSGSYLL----QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
           T + +   + +       ++I   + ++GL  D  V +AL+  + + G+   AR IF+QM
Sbjct: 198 TLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQM 257

Query: 258 IQKNVVSMNGLM-----EGRRK------------------------------------GK 276
             K++VS   ++     +GR+K                                    GK
Sbjct: 258 ADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGK 317

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           EVHGY+ R G        + LV++Y+KCG  + +R VF  M   D VSW ++I G  QNG
Sbjct: 318 EVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNG 377

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVS 395
             + A+  F ++ R G      + +  LS+C   G + +G +  H    K GL       
Sbjct: 378 QPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHY 437

Query: 396 NALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
             ++ L A +G       +   MP + D+  W S++G 
Sbjct: 438 ACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGG 475



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 189/408 (46%), Gaps = 29/408 (7%)

Query: 22  LC--NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           LC  NT+I+ Y  VG +  A KLFDEMP R++ SW  ++SGY  +G   EA  +F+ M++
Sbjct: 129 LCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFR-MMQ 187

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
                N                S  + G ++H  +++S    D +V   L+ +YG C  S
Sbjct: 188 ENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKC-GS 246

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
            + AR IF+++  +D++SW ++I    + G     F LF  +   G R    PNEYTF  
Sbjct: 247 LNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVR----PNEYTFAG 302

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           ++ A   + L+   + +++   + + G     +  SALV  +++ GN   AR++F QM +
Sbjct: 303 VLNAC--ADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPR 360

Query: 260 KNVVSMNGLMEGRRKGKEVH------GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
            ++VS   L+ G  +  +          L+RSG         G+++     G +D     
Sbjct: 361 PDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEY 420

Query: 314 FRFMIGKDSV-----SWNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSS 366
           F  +  K  +      +  +I  L ++G ++EA  I++   M+ D      F   S L  
Sbjct: 421 FHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPD-----KFLWASLLGG 475

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
           C   G I L ++      +L  ++  +    L ++YA+AG  +   KV
Sbjct: 476 CRIHGNIELAERAAKALFELEPENPATYI-TLSNIYANAGLWTEETKV 522



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 122/259 (47%), Gaps = 8/259 (3%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  +++ G   D  +   L+++Y + G L  A  +FD+M D++ VSW  ++   
Sbjct: 213 RRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRC 272

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   E   +F++++ +G   N Y    VL AC +      + G +VH  + +     
Sbjct: 273 FEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAE--QMGKEVHGYMTRVGYDP 330

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
               ++ L+ +Y  C  +T+ ARR+F ++   DL+SW S+I  Y+Q G      + F  +
Sbjct: 331 FSFAASALVHVYSKC-GNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESL 389

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            R G     KP+E TF  +++A   + L     L+   ++ +K GL+      + ++   
Sbjct: 390 LRSG----TKPDEITFVGVLSACTHAGLV-DIGLEYFHSVKEKHGLVHTADHYACVIDLL 444

Query: 242 ARLGNFYYARKIFEQMIQK 260
           AR G F  A  I + M  K
Sbjct: 445 ARSGRFKEAENIIDNMPMK 463



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           +S   +   +  +I  +     L +A++ +  + Q   RL    ++T+++AC     LE 
Sbjct: 26  LSHHSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRL----YSTLIAACLRHRKLEL 81

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G  VHA    +     +VI + L+ MY+KCG +  A   FD +P +++ SWN+MISGYA 
Sbjct: 82  GKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYAN 141

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
            G  ++A  LF +M    P  D+ ++  V+S     G   E    F+ M +
Sbjct: 142 VGRIEQARKLFDEM----PHRDNFSWNAVISGYVSQGWYMEALDLFRMMQE 188


>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
          Length = 861

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 251/766 (32%), Positives = 408/766 (53%), Gaps = 72/766 (9%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A   F  +  RD++SWNS++S Y Q G+++   ++F  M REG  +  +    TF  ++ 
Sbjct: 91  ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGR----TFAIILK 146

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
               S L  + L  QI  +V + G  +D+   SAL+  +A+   F  + ++F+ + +KN 
Sbjct: 147 VC--SFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS 204

Query: 263 VSMNGLMEG-----------------------------------------RRKGKEVHGY 281
           VS + ++ G                                          R G ++H +
Sbjct: 205 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAH 264

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
            ++S       V    ++MYAKC  + D++ +F      +  S+N MI+G  Q     +A
Sbjct: 265 ALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKA 324

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           ++ F  +   GL     SL     +CA +  +  G QI+G  +K  L  DV V+NA + +
Sbjct: 325 LLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDM 384

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y     L+   +VF  M   D VSWN++I A  +      E +  ++ M R+   P+  T
Sbjct: 385 YGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH-EQNGKGYETLFLFVSMLRSRIEPDEFT 443

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           F +IL A +  S+G  G ++H+ ++K  +A+ +++  +L+  Y KCG +++ EKI +R  
Sbjct: 444 FGSILKACTGGSLG-YGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFF 502

Query: 522 ERRDE-------------------VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
           +R +                    VSWNS+ISGY+  E    A  L   MM+ G   D F
Sbjct: 503 QRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKF 562

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           T+ATVL  CA++A+   G ++HA  ++  L+ DV I S LVDMYSKCG +  +   F+  
Sbjct: 563 TYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKS 622

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
             R+  +WN+MI GYA HG G++A+ LF +M L+   P+HVTF+ +L AC+H GL+D+G 
Sbjct: 623 LRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGL 682

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
           ++F  M + YGL PQL  +S MVD+LG++G++ +  E I +MP   + +IWRT+LG C  
Sbjct: 683 EYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCT- 741

Query: 743 ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
            +    E+  +A   L  ++PQ++  Y LL+N+YA  G WE V+  R+ M+  ++KKE G
Sbjct: 742 IHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPG 801

Query: 803 CSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR---DAGYV 845
           CSWV +KD +HVF+ GD++HP  + IYE+L  +  +M+   D+ +V
Sbjct: 802 CSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFV 847



 Score =  233 bits (594), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 182/669 (27%), Positives = 322/669 (48%), Gaps = 78/669 (11%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV   N +IN Y +  D+  A+  F+ MP R+ VSW  ++SGY   G S ++ ++F +M 
Sbjct: 71  DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 130

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           R G   +      +L+ C     +    GMQ+H +V++     D + ++ L+ MY     
Sbjct: 131 REGIEFDGRTFAIILKVCSFLEDTS--LGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 188

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             + + R+F+ I  ++ +SW++II+   Q        K F  MQ    + +   ++  + 
Sbjct: 189 FVE-SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ----KVNAGVSQSIYA 243

Query: 199 SLIT--AAYSSVLSGSYLLQQIL-------AMVKKAGLLSDLYVG--------------- 234
           S++   AA S +  G  L    L        +V+ A L  D+Y                 
Sbjct: 244 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL--DMYAKCDNMQDAQILFDNSE 301

Query: 235 -------SALVSGFARLGNFYYARKIFEQMIQKNV----VSMNG------LMEGRRKGKE 277
                  +A+++G+++  + + A  +F +++   +    +S++G      L++G  +G +
Sbjct: 302 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 361

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           ++G  I+S L   V V N  ++MY KC  + ++  VF  M  +D+VSWN +I+  +QNG 
Sbjct: 362 IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 421

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCA--SLGWIMLGQQIHGEGLKLGLDSDVSVS 395
             E +  F +M R  +    F+  S L +C   SLG+   G +IH   +K G+ S+ SV 
Sbjct: 422 GYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGY---GMEIHSSIVKSGMASNSSVG 478

Query: 396 NALLSLYADAGYLSRCLKV---FF-----------LMPEHDQ------VSWNSVIGAFAD 435
            +L+ +Y+  G +    K+   FF           L   H++      VSWNS+I  +  
Sbjct: 479 CSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVM 538

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
            E    +A   +  M   G +P+  T+  +L   ++ +   LG Q+HAQVIK  + ++  
Sbjct: 539 KEQ-SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVY 597

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           I + L+  Y KCG++ D   +F + S RRD V+WN+MI GY H+    +A+ L   M+  
Sbjct: 598 ICSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE 656

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRAC-LEFDVVIGSALVDMYSKCGRIDY 614
             + +H TF ++L ACA +  +++G+E      R   L+  +   S +VD+  K G++  
Sbjct: 657 NIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKR 716

Query: 615 ASRFFDLMP 623
           A      MP
Sbjct: 717 ALELIREMP 725



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 160/544 (29%), Positives = 260/544 (47%), Gaps = 59/544 (10%)

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           N ++N Y+K   +  + S F  M  +D VSWN+M+SG  QNG   ++I  F  M R+G+ 
Sbjct: 76  NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
               +    L  C+ L    LG QIHG  +++G D+DV  ++ALL +YA        L+V
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  +PE + VSW+++I     +  L+S A+K++ +M++     +   + ++L + ++ S 
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNN-LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 254

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            +LG Q+HA  +K + A +  +  A L  Y KC  M D + +F   SE  +  S+N+MI+
Sbjct: 255 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN-SENLNRQSYNAMIT 313

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           GY   E   KA+ L   +M  G   D  + + V  ACA V  L  G++++   +++ L  
Sbjct: 314 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL 373

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           DV + +A +DMY KC  +  A R FD M  R+  SWN++I+ + ++G G + L LF  M 
Sbjct: 374 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 433

Query: 655 LDGPLPDHVTFVGVLSACS----------HAGLVDEGFKHFKS-------MSQVYGLIPQ 697
                PD  TF  +L AC+          H+ +V  G     S       M    G+I +
Sbjct: 434 RSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEE 493

Query: 698 LEQF-SCMVDLLGRAGELDKIEEFINK--------------------------------- 723
            E+  S        +G ++++E+  NK                                 
Sbjct: 494 AEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM 553

Query: 724 -MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV--LLANMYASGG 780
            M ITP+   + TVL  C  AN     LG++    + + E Q+ V Y+   L +MY+  G
Sbjct: 554 EMGITPDKFTYATVLDTC--ANLASAGLGKQIHAQVIKKELQSDV-YICSTLVDMYSKCG 610

Query: 781 KWED 784
              D
Sbjct: 611 DLHD 614



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 145/588 (24%), Positives = 265/588 (45%), Gaps = 71/588 (12%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +++ G   DV   + L+++Y +      + ++F  +P++NSVSW+ I++G     +
Sbjct: 160 IHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNL 219

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            + A K FKEM +    +++    SVLR+C     S  + G Q+H   LKS+   DG+V 
Sbjct: 220 LSLALKFFKEMQKVNAGVSQSIYASVLRSC--AALSELRLGGQLHAHALKSDFAADGIVR 277

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
              + MY  C    D A+ +F+  E  +  S+N++I+ YSQ         LF R+   G 
Sbjct: 278 TATLDMYAKCDNMQD-AQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGL 336

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
            +    +E +   +  A   +++ G     QI  +  K+ L  D+ V +A +  + +   
Sbjct: 337 GF----DEISLSGVFRAC--ALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 390

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------------- 274
              A ++F++M +++ VS N ++    +                                
Sbjct: 391 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 450

Query: 275 --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF-RFM-------- 317
                   G E+H  +++SG+    +VG  L++MY+KCG I+++  +  RF         
Sbjct: 451 CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGT 510

Query: 318 -----------IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
                      + +  VSWN++ISG       E+A M F  M   G+    F+  + L +
Sbjct: 511 MEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDT 570

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSW 426
           CA+L    LG+QIH + +K  L SDV + + L+ +Y+  G L     +F      D V+W
Sbjct: 571 CANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTW 630

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
           N++I  +A       EA++ +  M      PN VTFI+IL A +   +   G +    + 
Sbjct: 631 NAMICGYA-HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMK 689

Query: 487 K-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           + Y +  +    + ++   GK G++    ++   M    D+V W +++
Sbjct: 690 RDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 737



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 166/358 (46%), Gaps = 38/358 (10%)

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSW 426
           CA  G + LG+Q H   +  G      V N LL +Y ++        VF  MP  D VSW
Sbjct: 16  CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75

Query: 427 NSVIGAFADSEALVS------------------------------EAVKYYLDMRRAGWS 456
           N +I  ++ S  +                                ++++ ++DM R G  
Sbjct: 76  NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
            +G TF  IL   S      LG Q+H  V++     +    +ALL  Y K     +  ++
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F  + E ++ VSW+++I+G + N LL  A+     M +    +    +A+VL +CA+++ 
Sbjct: 196 FQGIPE-KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 254

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           L  G ++HA  +++    D ++ +A +DMY+KC  +  A   FD     N  S+N+MI+G
Sbjct: 255 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 314

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
           Y++  HG KAL LF ++   G   D ++  GV  AC+    + EG        Q+YGL
Sbjct: 315 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL-------QIYGL 365



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 194/441 (43%), Gaps = 90/441 (20%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           +K   + DV + N  I++Y +   LA A ++FDEM  R++VSW  I++ +   G   E  
Sbjct: 367 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 426

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
            +F  M+R+    + +  GS+L+AC         +GM++H  ++KS    +  V   LI 
Sbjct: 427 FLFVSMLRSRIEPDEFTFGSILKACT---GGSLGYGMEIHSSIVKSGMASNSSVGCSLID 483

Query: 132 MYGSC---LESTDCARRIF---------EEIETRD-------LISWNSIISVYSQRGDTI 172
           MY  C    E+     R F         EE+E           +SWNSIIS Y  +  + 
Sbjct: 484 MYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSE 543

Query: 173 SVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLY 232
               LF+RM   G    + P+++T+ +++    +  L+ + L +QI A V K  L SD+Y
Sbjct: 544 DAQMLFTRMMEMG----ITPDKFTYATVLDTCAN--LASAGLGKQIHAQVIKKELQSDVY 597

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA 292
           + S LV  +++ G+ + +R +FE+ ++++ V+ N ++ G                     
Sbjct: 598 ICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICG--------------------- 636

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
                   YA  G  +++  +F  MI                                + 
Sbjct: 637 --------YAHHGKGEEAIQLFERMI-------------------------------LEN 657

Query: 353 LMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           +  ++ + IS L +CA +G I  G +  +      GLD  +   + ++ +   +G + R 
Sbjct: 658 IKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRA 717

Query: 412 LKVFFLMP-EHDQVSWNSVIG 431
           L++   MP E D V W +++G
Sbjct: 718 LELIREMPFEADDVIWRTLLG 738



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 18/158 (11%)

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           DVV  + +++ YSK   +  A+ FF++MPVR+V SWNSM+SGY ++G   K++ +F  M 
Sbjct: 71  DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 130

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
            +G   D  TF  +L  CS       G        Q++G++ ++    C  D++  +  L
Sbjct: 131 REGIEFDGRTFAIILKVCSFLEDTSLGM-------QIHGIVVRV---GCDTDVVAASALL 180

Query: 715 D---KIEEFINKMPI-----TPNSLIWRTVLGACCRAN 744
           D   K + F+  + +       NS+ W  ++  C + N
Sbjct: 181 DMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNN 218



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 54/96 (56%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q++K     DV++C+TL+++Y + GDL  +  +F++   R+ V+W  ++ GY H 
Sbjct: 581 KQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHH 640

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G   EA ++F+ M+      N     S+LRAC   G
Sbjct: 641 GKGEEAIQLFERMILENIKPNHVTFISILRACAHMG 676


>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Brachypodium distachyon]
          Length = 706

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 252/714 (35%), Positives = 392/714 (54%), Gaps = 40/714 (5%)

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLF----- 288
            +A ++   R GN   AR  F+ M  +   S N L+ G  +       L   GLF     
Sbjct: 20  ANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAAL---GLFHRMPS 76

Query: 289 -DMVAVGNGLVNMYAKCGTIDDSRSVF-RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
            D+ +    +  +  +  T+ D+ +      +    VS+ +++ G  ++G   +AI  F 
Sbjct: 77  RDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFH 136

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
            M     ++    L   L +    G +   +++  E      D DV    A+LS Y  AG
Sbjct: 137 QMPERNHVTYTVLLGGFLDA----GRVNEARKLFDEMP----DKDVVARTAMLSGYCQAG 188

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA--LVSEAVKYYLDMRRAGWSPNGVTFIN 464
            ++    +F  MP+ + VSW ++I  +A +    L  +  +   D     W+   V +I 
Sbjct: 189 RITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGYI- 247

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIE--NALLSCYGKCGEMDDCEKIFARMSE 522
                      + GH   A+ + +N   +  +   NA++  +G+ G +D  + +F RM  
Sbjct: 248 -----------QAGHVEDAEDL-FNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCA 295

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
           R D+ +W++MI  Y  NE L +A++    M+ RG R ++ +F ++L+ CA++AT + G E
Sbjct: 296 R-DDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRE 354

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
           +HA  +R   + DV   SAL+ MY KCG +D A R F++   ++V  WNSMI+GYA+HG 
Sbjct: 355 LHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGL 414

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
           G++AL +F  ++L    PD +T++GVL+ACS+ G V EG + F SM     +      +S
Sbjct: 415 GEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYS 474

Query: 703 CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
           CMVDLLGRAG +D+  + IN MP+ P+++IW  ++GA CR + +  E+   AA  L E+E
Sbjct: 475 CMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGA-CRMH-KNAEIAEVAAKKLLELE 532

Query: 763 PQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE-S 821
           P +A  YVLL+++Y S G+WED +  RK +    + K  GCSW+     VH+F +GD  S
Sbjct: 533 PGSAGPYVLLSHIYTSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLS 592

Query: 822 HPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR-N 880
           HPE  +I   L+EL+  + ++GY     F L D++ E K   + YHSE+ AVA+ L +  
Sbjct: 593 HPEHAIILNMLEELDGLLMESGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVP 652

Query: 881 SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           + +PIR+MKNLRVCGDCHSA K I+KI  REI+LRD+NRFHHF DG CSC DYW
Sbjct: 653 AGMPIRVMKNLRVCGDCHSAIKLITKITSREIILRDANRFHHFKDGLCSCRDYW 706



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 134/558 (24%), Positives = 239/558 (42%), Gaps = 79/558 (14%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +L  ++ L    A  V   N  I   VR G++  A   FD MP R + S+  +++GY   
Sbjct: 2   RLPSVRFLPSSTAPAVVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRN 61

Query: 65  GMSNEACKMFKEM----------VRAGFLLNRYAL--GSVLRACQECGPSGFKF-----G 107
            + + A  +F  M          + AG  L R+ L   +   A     PS   F     G
Sbjct: 62  HLPDAALGLFHRMPSRDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRG 121

Query: 108 MQVHCLVLKSNQTFDGLVSN---VLIAMYGSCLES--TDCARRIFEEIETRDLISWNSII 162
              H L+  + + F  +          + G  L++   + AR++F+E+  +D+++  +++
Sbjct: 122 YVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAML 181

Query: 163 SVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMV 222
           S Y Q G       LF  M +                                       
Sbjct: 182 SGYCQAGRITEARALFDEMPKR-------------------------------------- 203

Query: 223 KKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY- 281
                  ++   +A++SG+A+ G    ARK+FE M  +N VS   ++ G  +   V    
Sbjct: 204 -------NVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGYIQAGHVEDAE 256

Query: 282 -LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
            L  +     VA  N ++  + + G +D ++++F  M  +D  +W+ MI   +QN    E
Sbjct: 257 DLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLME 316

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A+  F  M   G+  +  S IS L+ CA+L     G+++H   L+   D+DV   +AL++
Sbjct: 317 ALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALIT 376

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +Y   G L +  +VF +    D V WNS+I  +A    L  EA+  + D+R A  +P+G+
Sbjct: 377 MYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYA-QHGLGEEALGIFDDLRLARMAPDGI 435

Query: 461 TFINILAAASSFSMGKLGHQVHAQV-----IKYNVANETTIENALLSCYGKCGEMDDCEK 515
           T+I +L A S     K G ++   +     I+   A+ + + + L    G+ G +D+   
Sbjct: 436 TYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLL----GRAGLVDEALD 491

Query: 516 IFARMSERRDEVSWNSMI 533
           +   M    D + W +++
Sbjct: 492 LINNMPVEPDAIIWGALM 509



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 106/249 (42%), Gaps = 53/249 (21%)

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK- 654
           VV  +A +    + G I+ A   FD MP+R   S+N++I+GY R+   D AL LF +M  
Sbjct: 17  VVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPS 76

Query: 655 ---------LDG------------------PLPDH-VTFVGVLSACSHAGLVDEGFKHFK 686
                    + G                  PLP   V+F  +L      GL+ +  + F 
Sbjct: 77  RDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFH 136

Query: 687 SMSQVYGLIPQLEQFSCMVDLLG--RAGELDKIEEFINKMPITPNSLIWRT-VLGACCRA 743
            M       P+    +  V L G   AG +++  +  ++MP     ++ RT +L   C+A
Sbjct: 137 QM-------PERNHVTYTVLLGGFLDAGRVNEARKLFDEMP--DKDVVARTAMLSGYCQA 187

Query: 744 NCRKTELGRKAANMLF-EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
             R TE     A  LF EM  +N V++  + + YA  GK   V  ARK  +    + E  
Sbjct: 188 G-RITE-----ARALFDEMPKRNVVSWTAMISGYAQNGK---VILARKLFEVMPDRNE-- 236

Query: 803 CSWVTMKDG 811
            SW  M  G
Sbjct: 237 VSWTAMLVG 245


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 255/715 (35%), Positives = 389/715 (54%), Gaps = 87/715 (12%)

Query: 297 LVNMYAKCGTIDDSRSVFR--FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           +V+ Y   G I  +R VF    +  +D+V +N MI+G   N     AI  FC M+ +G  
Sbjct: 86  MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145

Query: 355 SSNFSLISTLSSCASLGWIMLGQ----QIHGEGLKLGLDSDVSVSNALLSLYA----DAG 406
             NF+  S L   A L  +   +    Q H   LK G     SVSNAL+S+Y+       
Sbjct: 146 PDNFTFASVL---AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPS 202

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFA----------------DSEALVS--------- 441
            L    KVF  + E D+ SW +++  +                 D+  LV+         
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYV 262

Query: 442 ------EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
                 EA++    M  +G   +  T+ +++ A ++  + +LG QVHA V++    +   
Sbjct: 263 NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFS-FH 321

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN------ELLPKAMN-- 547
            +N+L+S Y KCG+ D+   IF +M  + D VSWN+++SGY+ +      +L+ K M   
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFKEMKEK 380

Query: 548 --LVWFMMQRGQRLDHF---------------------TFATVLSACASVATLERGMEVH 584
             L W +M  G   + F                      F+  + +CA +     G + H
Sbjct: 381 NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYH 440

Query: 585 ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGD 644
           A  ++   +  +  G+AL+ MY+KCG ++ A + F  MP  +  SWN++I+   +HGHG 
Sbjct: 441 AQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGA 500

Query: 645 KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCM 704
           +A+ ++ +M   G  PD +T + VL+ACSHAGLVD+G K+F SM  VY + P  + ++ +
Sbjct: 501 EAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARL 560

Query: 705 VDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ 764
           +DLL R+G+    E  I  +P  P + IW  +L   CR +    ELG  AA+ LF + P+
Sbjct: 561 IDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG-CRVH-GNMELGIIAADKLFGLIPE 618

Query: 765 NAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPE 824
           +   Y+LL+NM+A+ G+WE+VA+ RK M++  VKKE  CSW+ M+  VH F+  D SHPE
Sbjct: 619 HDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPE 678

Query: 825 KDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES-KEDLVSYHSEKIAVAFVLTRNSKL 883
            + +Y  L++L ++MR  GYVP T F L D+E +  KED+++ HSEKIAVAF L    KL
Sbjct: 679 AEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLM---KL 735

Query: 884 P----IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           P    IRI KNLR CGDCH+ F+F+S +V R+I+LRD  RFHHF +G+CSCG++W
Sbjct: 736 PPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 160/601 (26%), Positives = 261/601 (43%), Gaps = 107/601 (17%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEM--PD------------- 48
           A+  H  I+  GF     + N LI+VY +  +L  A +LFDE+  PD             
Sbjct: 33  ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92

Query: 49  ------------------RNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
                             R++V +  +++G++H      A  +F +M   GF  + +   
Sbjct: 93  SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD---CARRIF 147
           SVL           K  +Q H   LKS   +   VSN L+++Y  C  S      AR++F
Sbjct: 153 SVLAGLALVADDE-KQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVF 211

Query: 148 EEIETRD--------------------------------LISWNSIISVYSQRGDTISVF 175
           +EI  +D                                L+++N++IS Y  RG      
Sbjct: 212 DEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEAL 271

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS 235
           ++  RM   G    ++ +E+T+ S+I A  ++ L    L +Q+ A V +    S  +  +
Sbjct: 272 EMVRRMVSSG----IELDEFTYPSVIRACATAGL--LQLGKQVHAYVLRREDFS-FHFDN 324

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN 295
           +LVS + + G F  AR IFE+M  K++VS N L+ G                        
Sbjct: 325 SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSG------------------------ 360

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMS 355
                Y   G I +++ +F+ M  K+ +SW  MISGL +NG  EE +  F  M+R+G   
Sbjct: 361 -----YVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEP 415

Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
            +++    + SCA LG    GQQ H + LK+G DS +S  NAL+++YA  G +    +VF
Sbjct: 416 CDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVF 475

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
             MP  D VSWN++I A        +EAV  Y +M + G  P+ +T + +L A S   + 
Sbjct: 476 RTMPCLDSVSWNALIAALG-QHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLV 534

Query: 476 KLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
             G +   +    Y +         L+    + G+  D E +   +  +     W +++S
Sbjct: 535 DQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLS 594

Query: 535 G 535
           G
Sbjct: 595 G 595



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 206/495 (41%), Gaps = 124/495 (25%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGD----LASASKLFDEMPDRNSVSWA------- 55
           FH   LK G  Y   + N L++VY +       L SA K+FDE+ +++  SW        
Sbjct: 171 FHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYV 230

Query: 56  -------------------------CIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
                                     ++SGY ++G   EA +M + MV +G  L+ +   
Sbjct: 231 KNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYP 290

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           SV+RAC   G    + G QVH  VL+  + F     N L+++Y  C    D AR IFE++
Sbjct: 291 SVIRACATAGL--LQLGKQVHAYVLR-REDFSFHFDNSLVSLYYKC-GKFDEARAIFEKM 346

Query: 151 ETRDLISWNSIISVY---SQRGDTISVF----------------------------KLFS 179
             +DL+SWN+++S Y      G+   +F                            KLFS
Sbjct: 347 PAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFS 406

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            M+REGF    +P +Y F   I +   +VL      QQ  A + K G  S L  G+AL++
Sbjct: 407 CMKREGF----EPCDYAFSGAIKSC--AVLGAYCNGQQYHAQLLKIGFDSSLSAGNALIT 460

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVG----- 294
            +A+ G    AR++F  M   + VS N L+     G+  HG        +M+  G     
Sbjct: 461 MYAKCGVVEEARQVFRTMPCLDSVSWNALIAAL--GQHGHGAEAVDVYEEMLKKGIRPDR 518

Query: 295 NGLVNMYAKC---GTIDDSRSVFRFMIGKDSVSWNTMI-SGLDQNGCYEEAIMNFCAMRR 350
             L+ +   C   G +D  R  F      DS+     I  G D    Y   I   C   R
Sbjct: 519 ITLLTVLTACSHAGLVDQGRKYF------DSMETVYRIPPGADH---YARLIDLLC---R 566

Query: 351 DGLMSSNFSLISTLS-SCASLGW--IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
            G  S   S+I +L     +  W  ++ G ++HG  ++LG+            + AD   
Sbjct: 567 SGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG-NMELGI------------IAAD--- 610

Query: 408 LSRCLKVFFLMPEHD 422
                K+F L+PEHD
Sbjct: 611 -----KLFGLIPEHD 620



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 139/310 (44%), Gaps = 20/310 (6%)

Query: 17  AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKE 76
           A D+   N L++ YV  G +  A  +F EM ++N +SW  ++SG    G   E  K+F  
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS--NVLIAMYG 134
           M R GF    YA    +++C   G   +  G Q H  +LK    FD  +S  N LI MY 
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLG--AYCNGQQYHAQLLKIG--FDSSLSAGNALITMYA 463

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
            C    + AR++F  +   D +SWN++I+   Q G       ++  M ++G R    P+ 
Sbjct: 464 KC-GVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIR----PDR 518

Query: 195 YTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKI 253
            T  +++TA +++ ++         +  V +    +D Y  + L+    R G F  A  +
Sbjct: 519 ITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHY--ARLIDLLCRSGKFSDAESV 576

Query: 254 FEQMIQKNVVSM-NGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTI 307
            E +  K    +   L+ G R  G    G +    LF ++   +G    L NM+A  G  
Sbjct: 577 IESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQW 636

Query: 308 DDSRSVFRFM 317
           ++   V + M
Sbjct: 637 EEVARVRKLM 646


>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
 gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
 gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
          Length = 1027

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 261/878 (29%), Positives = 446/878 (50%), Gaps = 94/878 (10%)

Query: 8    HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
            H  ++K GF+  VF    L+++Y + GD+ +A ++FD +   +++ W+ +++ Y   G  
Sbjct: 181  HCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCY 240

Query: 68   NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
             EA  +F  M + G   ++  L +++      G                           
Sbjct: 241  QEALALFSRMDKMGSAPDQVTLVTIISTLASSG--------------------------- 273

Query: 128  VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
                         D A  + +++ T   ++WN++IS ++Q G   +V  L+  M+  G  
Sbjct: 274  -----------RLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWG-- 320

Query: 188  YSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
              L P   TF S+++AA +  + + G    QQ+ A     GL ++++VGS+L++ +A+ G
Sbjct: 321  --LWPTRSTFASMLSAAANMKAFVEG----QQMHAAAVMHGLDANVFVGSSLINLYAKCG 374

Query: 246  NFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------- 274
                A+ +F+   +KN+V  N ++ G  +                               
Sbjct: 375  CPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILG 434

Query: 275  ----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                      GK+VH   I++ +   + V N  ++MY+K G I D++++F  +  KDS+S
Sbjct: 435  ACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSIS 494

Query: 325  WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
            WN +  GL QN   EEA+     MR  G+   + S  + +++C+++     G+QIH   +
Sbjct: 495  WNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAI 554

Query: 385  KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
            K G+ S+ +V ++L+ LY+  G +    K+F  +     V  N++I  F  +     EA+
Sbjct: 555  KYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNN-EDEAI 613

Query: 445  KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA-NETTIENALLSC 503
            + +  + + G  P+ VTF +IL+  S      +G QVH   +K  V  ++T +  +L   
Sbjct: 614  QLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGI 673

Query: 504  YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
            Y K   ++D  K+   M + ++   W ++ISGY  N     ++   W M     R D  T
Sbjct: 674  YLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEAT 733

Query: 564  FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR-IDYASRFFDLM 622
            FA+VL AC+ V     G E+H    ++         SAL+DMYSKCG  I     F +L 
Sbjct: 734  FASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELK 793

Query: 623  PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
              +++  WNSMI G+A++G+ D+AL LF +M+     PD VTF+GVL AC+H+GL+ EG 
Sbjct: 794  NKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGR 853

Query: 683  KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
              F SM +VYGL P+L+ ++C +DLLGR G L + +E I+++P  P+ ++W T L A CR
Sbjct: 854  HFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAA-CR 912

Query: 743  ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
             + +  E G+ AA  L E+EPQ +  YVLL++++A+ G W +    R++M+E  V K  G
Sbjct: 913  MH-KDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPG 971

Query: 803  CSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
            CSW+T+ +   +F+  D+ HP+   IYE L +L   M+
Sbjct: 972  CSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMK 1009



 Score =  297 bits (761), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 215/756 (28%), Positives = 376/756 (49%), Gaps = 46/756 (6%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S+  +  H +IL+ G      L ++L+ +Y + G +  A        +R S + + ++S 
Sbjct: 72  SQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSC 131

Query: 61  YTHKGMSNEACKMFKEM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           +   G   +    F+ +   AG   +++ L  VL AC   G     +G QVHC V+KS  
Sbjct: 132 HARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGV--LAYGRQVHCDVVKSGF 189

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           +        L+ MY  C +  + ARR+F+ I   D I W+S+I+ Y + G       LFS
Sbjct: 190 SSSVFCEAALVDMYAKCGDVPN-ARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFS 248

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           RM + G      P++ T  ++I     S L+ S  L    A++KK    S +   +A++S
Sbjct: 249 RMDKMGS----APDQVTLVTII-----STLASSGRLDHATALLKKMPTPSTV-AWNAVIS 298

Query: 240 GFARLGNFYYARKIFEQMIQ----------KNVVSMNGLMEGRRKGKEVHGYLIRSGLFD 289
           G A+ G  +    +++ M             +++S    M+   +G+++H   +  GL  
Sbjct: 299 GHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDA 358

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
            V VG+ L+N+YAKCG   D+++VF     K+ V WN M++G  QN   EEAI  F  M 
Sbjct: 359 NVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMM 418

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
           R  L +  F+ +S L +C  L    LG+Q+H   +K  +D  + V+NA L +Y+  G + 
Sbjct: 419 RYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIG 478

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
               +F L+P  D +SWN++    A +     EAV     MR  G +P+ V+F   + A 
Sbjct: 479 DAKALFSLIPYKDSISWNALTVGLAQNLE-EEEAVCMLKRMRLHGITPDDVSFSTAINAC 537

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
           S+    + G Q+H   IKY + +   + ++L+  Y K G+++   KIFA++ +    V  
Sbjct: 538 SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQV-DASSIVPI 596

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
           N++I+G++ N    +A+ L   +++ G +    TF+++LS C+       G +VH   ++
Sbjct: 597 NALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLK 656

Query: 590 ACLEF-DVVIGSALVDMYSKCGRIDYASRFFDLMP-VRNVYSWNSMISGYARHGHGDKAL 647
           + + + D ++G +L  +Y K   ++ A++    MP  +N++ W ++ISGYA++G+GD +L
Sbjct: 657 SGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSL 716

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL------EQF 701
             F +M+      D  TF  VL ACS      +G        +++GLI +          
Sbjct: 717 VSFWRMRHCNVRSDEATFASVLKACSDVTAFADG-------KEIHGLITKSGFGSYETAT 769

Query: 702 SCMVDLLGRAGEL----DKIEEFINKMPITP-NSLI 732
           S ++D+  + G++    +  +E  NK  I P NS+I
Sbjct: 770 SALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 805



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 115/257 (44%), Gaps = 13/257 (5%)

Query: 5   KLFHLQILKHGFAYD-VFLCNTLINVYVRVGDLASASKLFDEMPD-RNSVSWACIVSGYT 62
           K  H   LK G  YD   L  +L  +Y++   L  A+KL  EMPD +N   W  I+SGY 
Sbjct: 648 KQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYA 707

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G  + +   F  M       +     SVL+AC +   + F  G ++H L+ KS     
Sbjct: 708 QNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDV--TAFADGKEIHGLITKSGFGSY 765

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
              ++ LI MY  C +         E    +D++ WNS+I  +++ G       LF +M+
Sbjct: 766 ETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKME 825

Query: 183 REGFRYSLKPNEYTF-GSLITAAYSSVLS-GSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
                  +KP+E TF G LI   +S ++S G +      +M K  GL   L   +  +  
Sbjct: 826 ----ELQIKPDEVTFLGVLIACTHSGLISEGRHFFG---SMRKVYGLTPRLDHYACFIDL 878

Query: 241 FARLGNFYYARKIFEQM 257
             R G+   A++  +Q+
Sbjct: 879 LGRGGHLQEAQEAIDQL 895



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           ++  K  H   +K+G   +  + ++LI++Y + GD+ S+ K+F ++   + V    +++G
Sbjct: 543 TETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAG 602

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           +      +EA ++F+++++ G   +     S+L  C   G      G QVHC  LKS   
Sbjct: 603 FVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS--GSLNSAIGKQVHCYTLKSGVL 660

Query: 121 FDGLVSNVLIA-MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           +D  +  V +A +Y       D  + + E  + ++L  W +IIS Y+Q G        F 
Sbjct: 661 YDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFW 720

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           RM+      +++ +E TF S++ A   S ++     ++I  ++ K+G  S     SAL+ 
Sbjct: 721 RMR----HCNVRSDEATFASVLKAC--SDVTAFADGKEIHGLITKSGFGSYETATSALID 774

Query: 240 GFARLGNFYYARKIFEQMIQK-NVVSMNGLMEGRRK 274
            +++ G+   + + F+++  K +++  N ++ G  K
Sbjct: 775 MYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAK 810


>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
          Length = 440

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 203/440 (46%), Positives = 297/440 (67%), Gaps = 4/440 (0%)

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           + NAL+  Y K G  D    +F +M+++ D +SW S+++G +HN    +A+ L   M   
Sbjct: 4   VNNALVDMYAKXGYFDYAFDVFEKMTDK-DVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G   D    A VLSACA +  LE G +VHA  +++ L   + + ++LV MY+KCG I+ A
Sbjct: 63  GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDA 122

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
           ++ FD M +++V +W ++I GYA++G G ++L  ++ M   G  PD +TF+G+L ACSHA
Sbjct: 123 NKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHA 182

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           GLV+ G  +F+SM +VYG+ P  E ++CM+DLLGR+G+L + +E +N+M + P++ +W+ 
Sbjct: 183 GLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKA 242

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           +L A CR +    ELG +AAN LFE+EP+NAV YVLL+N+Y++ GKWE+ AK R+ MK  
Sbjct: 243 LLAA-CRVH-GNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLR 300

Query: 796 EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
            V KE GCSW+ M   VH F++ D SHP    IY K+ E+   +++AGYVP   FAL D+
Sbjct: 301 GVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDM 360

Query: 856 EPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
           + E KE  ++YHSEK+AVAF +LT     PIRI KNLR+CGDCH+A K++S +  R ++L
Sbjct: 361 DEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVIL 420

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RDSN FHHF +G CSC DYW
Sbjct: 421 RDSNCFHHFREGACSCSDYW 440



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 132/247 (53%), Gaps = 2/247 (0%)

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
           M  V N LV+MYAK G  D +  VF  M  KD +SW ++++G   NG YEEA+  FC MR
Sbjct: 1   MELVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMR 60

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
             G+      + + LS+CA L  +  G+Q+H   LK GL S +SV N+L+S+YA  G + 
Sbjct: 61  IMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIE 120

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
              KVF  M   D ++W ++I  +A +     E++ +Y BM  +G  P+ +TFI +L A 
Sbjct: 121 DANKVFDSMEIQDVITWTALIVGYAQN-GRGRESLNFYNBMIASGVKPDFITFIGLLFAC 179

Query: 470 SSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
           S   + + G      + + Y +         ++   G+ G++ + +++  +M+ + D   
Sbjct: 180 SHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATV 239

Query: 529 WNSMISG 535
           W ++++ 
Sbjct: 240 WKALLAA 246



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 142/302 (47%), Gaps = 18/302 (5%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N L+++Y + G    A  +F++M D++ +SW  +V+G  H G   EA ++F EM   G  
Sbjct: 6   NALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIH 65

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
            ++  + +VL AC E   +  +FG QVH   LKS       V N L++MY  C    D A
Sbjct: 66  PDQIVIAAVLSACAEL--TVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIED-A 122

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
            ++F+ +E +D+I+W ++I  Y+Q G        ++ M   G    +KP+  TF  L+ A
Sbjct: 123 NKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASG----VKPDFITFIGLLFA 178

Query: 204 AYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQK 260
              +  V  G    Q   +M +  G+       + ++    R G    A+++  QM +Q 
Sbjct: 179 CSHAGLVEHGRSYFQ---SMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQP 235

Query: 261 NVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMV---AVGNGLV-NMYAKCGTIDDSRSVFR 315
           +      L+   R  G    G    + LF++    AV   L+ N+Y+  G  +++    R
Sbjct: 236 DATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRR 295

Query: 316 FM 317
            M
Sbjct: 296 LM 297



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 41/186 (22%)

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--------------------- 271
           V +ALV  +A+ G F YA  +FE+M  K+V+S   L+ G                     
Sbjct: 4   VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63

Query: 272 --------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
                                  GK+VH   ++SGL   ++V N LV+MYAKCG I+D+ 
Sbjct: 64  IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 123

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
            VF  M  +D ++W  +I G  QNG   E++  +  M   G+     + I  L +C+  G
Sbjct: 124 KVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAG 183

Query: 372 WIMLGQ 377
            +  G+
Sbjct: 184 LVEHGR 189



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 76/141 (53%), Gaps = 2/141 (1%)

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
           ++ +ALVDMY+K G  DYA   F+ M  ++V SW S+++G   +G  ++AL LF +M++ 
Sbjct: 3   LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
           G  PD +    VLSAC+   +++ G K   +     GL   L   + +V +  + G ++ 
Sbjct: 63  GIHPDQIVIAAVLSACAELTVLEFG-KQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIED 121

Query: 717 IEEFINKMPITPNSLIWRTVL 737
             +  + M I  + + W  ++
Sbjct: 122 ANKVFDSMEIQ-DVITWTALI 141



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 48/96 (50%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   LK G    + + N+L+++Y + G +  A+K+FD M  ++ ++W  ++ GY   
Sbjct: 88  KQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQN 147

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G   E+   + +M+ +G   +      +L AC   G
Sbjct: 148 GRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAG 183


>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
          Length = 1037

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 261/878 (29%), Positives = 446/878 (50%), Gaps = 94/878 (10%)

Query: 8    HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
            H  ++K GF+  VF    L+++Y + GD+ +A ++FD +   +++ W+ +++ Y   G  
Sbjct: 191  HCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCY 250

Query: 68   NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
             EA  +F  M + G   ++  L +++      G                           
Sbjct: 251  QEALALFSRMDKMGSAPDQVTLVTIISTLASSG--------------------------- 283

Query: 128  VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
                         D A  + +++ T   ++WN++IS ++Q G   +V  L+  M+  G  
Sbjct: 284  -----------RLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWG-- 330

Query: 188  YSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
              L P   TF S+++AA +  + + G    QQ+ A     GL ++++VGS+L++ +A+ G
Sbjct: 331  --LWPTRSTFASMLSAAANMKAFVEG----QQMHAAAVMHGLDANVFVGSSLINLYAKCG 384

Query: 246  NFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------- 274
                A+ +F+   +KN+V  N ++ G  +                               
Sbjct: 385  CPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILG 444

Query: 275  ----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                      GK+VH   I++ +   + V N  ++MY+K G I D++++F  +  KDS+S
Sbjct: 445  ACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSIS 504

Query: 325  WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
            WN +  GL QN   EEA+     MR  G+   + S  + +++C+++     G+QIH   +
Sbjct: 505  WNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAI 564

Query: 385  KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
            K G+ S+ +V ++L+ LY+  G +    K+F  +     V  N++I  F  +     EA+
Sbjct: 565  KYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNN-EDEAI 623

Query: 445  KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA-NETTIENALLSC 503
            + +  + + G  P+ VTF +IL+  S      +G QVH   +K  V  ++T +  +L   
Sbjct: 624  QLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGI 683

Query: 504  YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
            Y K   ++D  K+   M + ++   W ++ISGY  N     ++   W M     R D  T
Sbjct: 684  YLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEAT 743

Query: 564  FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR-IDYASRFFDLM 622
            FA+VL AC+ V     G E+H    ++         SAL+DMYSKCG  I     F +L 
Sbjct: 744  FASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELK 803

Query: 623  PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
              +++  WNSMI G+A++G+ D+AL LF +M+     PD VTF+GVL AC+H+GL+ EG 
Sbjct: 804  NKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGR 863

Query: 683  KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
              F SM +VYGL P+L+ ++C +DLLGR G L + +E I+++P  P+ ++W T L A CR
Sbjct: 864  HFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAA-CR 922

Query: 743  ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
             + +  E G+ AA  L E+EPQ +  YVLL++++A+ G W +    R++M+E  V K  G
Sbjct: 923  MH-KDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPG 981

Query: 803  CSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
            CSW+T+ +   +F+  D+ HP+   IYE L +L   M+
Sbjct: 982  CSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMK 1019



 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 215/756 (28%), Positives = 376/756 (49%), Gaps = 46/756 (6%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S+  +  H +IL+ G      L ++L+ +Y + G +  A        +R S + + ++S 
Sbjct: 82  SQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSC 141

Query: 61  YTHKGMSNEACKMFKEM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           +   G   +    F+ +   AG   +++ L  VL AC   G     +G QVHC V+KS  
Sbjct: 142 HARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGV--LAYGRQVHCDVVKSGF 199

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           +        L+ MY  C +  + ARR+F+ I   D I W+S+I+ Y + G       LFS
Sbjct: 200 SSSVFCEAALVDMYAKCGDVPN-ARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFS 258

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           RM + G      P++ T  ++I     S L+ S  L    A++KK    S +   +A++S
Sbjct: 259 RMDKMGS----APDQVTLVTII-----STLASSGRLDHATALLKKMPTPSTV-AWNAVIS 308

Query: 240 GFARLGNFYYARKIFEQMIQ----------KNVVSMNGLMEGRRKGKEVHGYLIRSGLFD 289
           G A+ G  +    +++ M             +++S    M+   +G+++H   +  GL  
Sbjct: 309 GHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDA 368

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
            V VG+ L+N+YAKCG   D+++VF     K+ V WN M++G  QN   EEAI  F  M 
Sbjct: 369 NVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMM 428

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
           R  L +  F+ +S L +C  L    LG+Q+H   +K  +D  + V+NA L +Y+  G + 
Sbjct: 429 RYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIG 488

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
               +F L+P  D +SWN++    A +     EAV     MR  G +P+ V+F   + A 
Sbjct: 489 DAKALFSLIPYKDSISWNALTVGLAQNLE-EEEAVCMLKRMRLHGITPDDVSFSTAINAC 547

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
           S+    + G Q+H   IKY + +   + ++L+  Y K G+++   KIFA++ +    V  
Sbjct: 548 SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQV-DASSIVPI 606

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
           N++I+G++ N    +A+ L   +++ G +    TF+++LS C+       G +VH   ++
Sbjct: 607 NALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLK 666

Query: 590 ACLEF-DVVIGSALVDMYSKCGRIDYASRFFDLMP-VRNVYSWNSMISGYARHGHGDKAL 647
           + + + D ++G +L  +Y K   ++ A++    MP  +N++ W ++ISGYA++G+GD +L
Sbjct: 667 SGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSL 726

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL------EQF 701
             F +M+      D  TF  VL ACS      +G        +++GLI +          
Sbjct: 727 VSFWRMRHCNVRSDEATFASVLKACSDVTAFADG-------KEIHGLITKSGFGSYETAT 779

Query: 702 SCMVDLLGRAGEL----DKIEEFINKMPITP-NSLI 732
           S ++D+  + G++    +  +E  NK  I P NS+I
Sbjct: 780 SALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 815



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 115/257 (44%), Gaps = 13/257 (5%)

Query: 5   KLFHLQILKHGFAYD-VFLCNTLINVYVRVGDLASASKLFDEMPD-RNSVSWACIVSGYT 62
           K  H   LK G  YD   L  +L  +Y++   L  A+KL  EMPD +N   W  I+SGY 
Sbjct: 658 KQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYA 717

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G  + +   F  M       +     SVL+AC +   + F  G ++H L+ KS     
Sbjct: 718 QNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDV--TAFADGKEIHGLITKSGFGSY 775

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
              ++ LI MY  C +         E    +D++ WNS+I  +++ G       LF +M+
Sbjct: 776 ETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKME 835

Query: 183 REGFRYSLKPNEYTF-GSLITAAYSSVLS-GSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
                  +KP+E TF G LI   +S ++S G +      +M K  GL   L   +  +  
Sbjct: 836 ----ELQIKPDEVTFLGVLIACTHSGLISEGRHFFG---SMRKVYGLTPRLDHYACFIDL 888

Query: 241 FARLGNFYYARKIFEQM 257
             R G+   A++  +Q+
Sbjct: 889 LGRGGHLQEAQEAIDQL 905



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           ++  K  H   +K+G   +  + ++LI++Y + GD+ S+ K+F ++   + V    +++G
Sbjct: 553 TETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAG 612

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           +      +EA ++F+++++ G   +     S+L  C   G      G QVHC  LKS   
Sbjct: 613 FVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS--GSLNSAIGKQVHCYTLKSGVL 670

Query: 121 FDGLVSNVLIA-MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           +D  +  V +A +Y       D  + + E  + ++L  W +IIS Y+Q G        F 
Sbjct: 671 YDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFW 730

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           RM+      +++ +E TF S++ A   S ++     ++I  ++ K+G  S     SAL+ 
Sbjct: 731 RMR----HCNVRSDEATFASVLKAC--SDVTAFADGKEIHGLITKSGFGSYETATSALID 784

Query: 240 GFARLGNFYYARKIFEQMIQK-NVVSMNGLMEGRRK 274
            +++ G+   + + F+++  K +++  N ++ G  K
Sbjct: 785 MYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAK 820


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/629 (36%), Positives = 365/629 (58%), Gaps = 22/629 (3%)

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           +W+++I     +     +  +F +MR   +  +     S L +   L    L   +H   
Sbjct: 77  AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136

Query: 384 LKLGLDSDVSVSNALLSLYA---DAGYLSRCL------------KVFFLMPEHDQVSWNS 428
           ++LGLDSD+ ++NAL++ YA   +AG +                KVF +MP  D VSWN+
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAG-WSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           VI  FA +   V EA+    +M + G   P+  T  +IL   +       G ++H   ++
Sbjct: 197 VIAGFAQNGMYV-EALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVR 255

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
                +  I ++L+  Y KC  ++   + F  +  R+D +SWNS+I+G + N    + + 
Sbjct: 256 NGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILP-RKDAISWNSIIAGCVQNGEFDRGLG 314

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
               M++   +    +F++V+ ACA +  L  G ++H C VR   + +  I S+LVDMY+
Sbjct: 315 FFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYA 374

Query: 608 KCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVG 667
           KCG I  A   FD +  R++ +W ++I G A HGH   A++LF  M  DG  P +V F+ 
Sbjct: 375 KCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMA 434

Query: 668 VLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP-I 726
           VL+ACSHAGLVDEG+++F SM + +G+ P LE ++ + DLLGRAG L++  +FI+ M  +
Sbjct: 435 VLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGV 494

Query: 727 TPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVA 786
            P   +W ++L A CRA+ +  EL  K  + L  ++ +N   YVL++N+Y++  +W+D A
Sbjct: 495 QPTGSVW-SILLAACRAH-KSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAA 552

Query: 787 KARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVP 846
           + R  M++  +KK   CSW+ + + VH F+AGD+SHP  D I + L  L ++M   GYV 
Sbjct: 553 RLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVI 612

Query: 847 QTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFIS 905
            T   L D++ E K +L+  HSE++A+A+ +++  +   IR++KN+RVC DCH+A KFI+
Sbjct: 613 DTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFIT 672

Query: 906 KIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           KIVGREI +RD++RFHHF +G CSCGDYW
Sbjct: 673 KIVGREITVRDNSRFHHFKNGSCSCGDYW 701



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 197/405 (48%), Gaps = 38/405 (9%)

Query: 251 RKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT---- 306
           R +F  +++ +      L++  +    +H   +R GL   + + N L+N YAK       
Sbjct: 110 RHVFPSLLKAST-----LLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKV 164

Query: 307 -----------IDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG-LM 354
                      ID  + VF  M  +D VSWNT+I+G  QNG Y EA+     M ++G L 
Sbjct: 165 FDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLK 224

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
             +F+L S L   A    +  G++IHG  ++ G D DV + ++L+ +YA    L   L+ 
Sbjct: 225 PDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRA 284

Query: 415 FFLMPEHDQVSWNSVI-GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           F+++P  D +SWNS+I G   + E      + ++  M +    P  V+F +++ A +  +
Sbjct: 285 FYILPRKDAISWNSIIAGCVQNGE--FDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLT 342

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
              LG Q+H  +++    +   I ++L+  Y KCG +     +F R+ ++RD V+W ++I
Sbjct: 343 ALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRI-DKRDMVAWTAII 401

Query: 534 SG-YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL 592
            G  +H   L  A++L   M++ G R  +  F  VL+AC+    ++ G        R   
Sbjct: 402 MGCAMHGHAL-DAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMER--- 457

Query: 593 EFDVVIG----SALVDMYSKCGRIDYASRFFDLM----PVRNVYS 629
           +F +  G    +A+ D+  + GR++ A  F   M    P  +V+S
Sbjct: 458 DFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWS 502



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 194/421 (46%), Gaps = 69/421 (16%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLI-SWNSIISVYSQ 167
           Q+H  ++K+  T      N+L+    S L     +  +F  + +     +W+SII  Y+ 
Sbjct: 30  QLHAHIVKTKGTLHS--DNILVLSLYSNLNLLQHSLHLFNSLPSPPPPLAWSSIIKCYTS 87

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
                  F  F+ M+      S+ PN + F SL+ A  S++L    L   + A   + GL
Sbjct: 88  HSLLHLSFSSFNSMRS----LSVPPNRHVFPSLLKA--STLLKHHKLAHSLHACTVRLGL 141

Query: 228 LSDLYVGSALVSGFARLGN---------------FYYARKIFEQMIQKNVVSMNGLMEG- 271
            SDLY+ +AL++ +A+  N                   +K+F+ M  ++VVS N ++ G 
Sbjct: 142 DSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGF 201

Query: 272 -----------------------------------------RRKGKEVHGYLIRSGLFDM 290
                                                      KGKE+HGY +R+G    
Sbjct: 202 AQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGD 261

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           V +G+ L++MYAKC  ++ S   F  +  KD++SWN++I+G  QNG ++  +  F  M +
Sbjct: 262 VFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLK 321

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
           + +     S  S + +CA L  + LG+Q+HG  ++LG D +  ++++L+ +YA  G +  
Sbjct: 322 ENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKM 381

Query: 411 CLKVFFLMPEHDQVSWNSVI-GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
              VF  + + D V+W ++I G      AL  +AV  + +M   G  P  V F+ +L A 
Sbjct: 382 ARYVFDRIDKRDMVAWTAIIMGCAMHGHAL--DAVSLFENMLEDGVRPCYVAFMAVLTAC 439

Query: 470 S 470
           S
Sbjct: 440 S 440



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 92/408 (22%), Positives = 172/408 (42%), Gaps = 71/408 (17%)

Query: 53  SWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHC 112
           +W+ I+  YT   + + +   F  M       NR+   S+L+A         K    +H 
Sbjct: 77  AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLL--KHHKLAHSLHA 134

Query: 113 LVLKSNQTFDGLVSNVLIAMYGSCLES--------------TDCARRIFEEIETRDLISW 158
             ++     D  ++N LI  Y     +               DC +++F+ +  RD++SW
Sbjct: 135 CTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSW 194

Query: 159 NSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL--ITAAYSSVLSGSYLLQ 216
           N++I+ ++Q G  +    +   M + G    LKP+ +T  S+  I A +  V  G    +
Sbjct: 195 NTVIAGFAQNGMYVEALDMVREMGKNG---KLKPDSFTLSSILPIFAEHVDVNKG----K 247

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG----- 271
           +I     + G   D+++GS+L+  +A+      + + F  + +K+ +S N ++ G     
Sbjct: 248 EIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNG 307

Query: 272 ---------RRK---------------------------GKEVHGYLIRSGLFDMVAVGN 295
                    RR                            G+++HG ++R G  D   + +
Sbjct: 308 EFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIAS 367

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMS 355
            LV+MYAKCG I  +R VF  +  +D V+W  +I G   +G   +A+  F  M  DG+  
Sbjct: 368 SLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRP 427

Query: 356 SNFSLISTLSSCASL-----GWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
              + ++ L++C+       GW          G+  GL+   +V++ L
Sbjct: 428 CYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLL 475



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 141/287 (49%), Gaps = 27/287 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGD---------------LASASKLFDEM 46
           K A   H   ++ G   D+++ N LIN Y +  +               +    K+FD M
Sbjct: 127 KLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMM 186

Query: 47  PDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFK 105
           P R+ VSW  +++G+   GM  EA  M +EM + G L  + + L S+L    E       
Sbjct: 187 PVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAE--HVDVN 244

Query: 106 FGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY 165
            G ++H   +++    D  + + LI MY  C    +C+ R F  +  +D ISWNSII+  
Sbjct: 245 KGKEIHGYAVRNGFDGDVFIGSSLIDMYAKC-NRLECSLRAFYILPRKDAISWNSIIAGC 303

Query: 166 SQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKK 224
            Q G+       F RM +E    ++KP   +F S+I A A+ + LS   L +Q+   + +
Sbjct: 304 VQNGEFDRGLGFFRRMLKE----NVKPMAVSFSSVIPACAHLTALS---LGRQLHGCIVR 356

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
            G   + ++ S+LV  +A+ GN   AR +F+++ ++++V+   ++ G
Sbjct: 357 LGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMG 403



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 98/199 (49%), Gaps = 7/199 (3%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   +++GF  DVF+ ++LI++Y +   L  + + F  +P ++++SW  I++G    
Sbjct: 247 KEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQN 306

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G  +     F+ M++        +  SV+ AC     +    G Q+H  +++     +  
Sbjct: 307 GEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHL--TALSLGRQLHGCIVRLGFDDNEF 364

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           +++ L+ MY  C  +   AR +F+ I+ RD+++W +II   +  G  +    LF  M  +
Sbjct: 365 IASSLVDMYAKC-GNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLED 423

Query: 185 GFRYSLKPNEYTFGSLITA 203
           G R    P    F +++TA
Sbjct: 424 GVR----PCYVAFMAVLTA 438



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 51/96 (53%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H  I++ GF  + F+ ++L+++Y + G++  A  +FD +  R+ V+W  I+ G    
Sbjct: 348 RQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMH 407

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G + +A  +F+ M+  G      A  +VL AC   G
Sbjct: 408 GHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAG 443


>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
 gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
          Length = 684

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/645 (36%), Positives = 361/645 (55%), Gaps = 17/645 (2%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSV--SWNTMISGLDQNGCYEEAIMNFCAM----RR 350
           L   YA+ G +D + S         S   +WN +++   + G    A+  F A+    R 
Sbjct: 50  LAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVFRALPSSARP 109

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
           D   S+ F+L   L++CA LG +   + +       G   DV V +ALL +Y+  G +  
Sbjct: 110 D---STTFTL--ALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGD 164

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
            ++VF  MP  D V+W++++  F  +   V EA+  Y  MR  G + + V  + ++ A +
Sbjct: 165 AIRVFDGMPRKDHVAWSTMVAGFVSAGRPV-EALGMYSRMREHGVAEDEVVMVGVIQACT 223

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
                ++G  VH + +++ +  +  I  +L+  Y K G  D   ++F RM   R+ VSWN
Sbjct: 224 LTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVF-RMMPYRNAVSWN 282

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           ++ISG+  N    +A++L   M   G + D     + L ACA V  L+ G  +H   +R 
Sbjct: 283 ALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRR 342

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
            LEF  ++G+A++DMYSKCG ++ A + F+ +  R++  WN+MI+    HG G  AL LF
Sbjct: 343 -LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALF 401

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
            ++   G  PDH TF  +LSA SH+GLV+EG   F  M   +G+ P  +   C+VDLL R
Sbjct: 402 QELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLAR 461

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
           +G +++  E +  M   P   IW  +L  C   N +K ELG   A  + E +P++     
Sbjct: 462 SGLVEEANEMLASMHTEPTIPIWVALLSGCL--NNKKLELGETIAKKILESQPEDIGVLA 519

Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
           L++N+YA+  KW+ V + RK MK++  KK  G S + +    H FV  D+SHP+   I +
Sbjct: 520 LVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILK 579

Query: 831 KLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMK 889
            + +L+ +MR  GYVP+T+F   DL+ + KE L+SYHSE++A+AF L   S    + I+K
Sbjct: 580 MISKLSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIK 639

Query: 890 NLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           NLRVCGDCH A K+ISKIV REIV+RD+ RFHHF DG CSCGDYW
Sbjct: 640 NLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 13/352 (3%)

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           V V + L+++Y++CG + D+  VF  M  KD V+W+TM++G    G   EA+  +  MR 
Sbjct: 146 VFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMRE 205

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
            G+      ++  + +C   G   +G  +HG  L+ G+  DV ++ +L+ +YA  G+   
Sbjct: 206 HGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDV 265

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
             +VF +MP  + VSWN++I  FA +     EA+  + +M  +G  P+    ++ L A +
Sbjct: 266 ARQVFRMMPYRNAVSWNALISGFAQN-GHADEALDLFREMSTSGLQPDSGALVSALLACA 324

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
                KLG  +H  +++  +  +  +  A+L  Y KCG ++   K+F ++S  RD V WN
Sbjct: 325 DVGFLKLGKSIHGFILR-RLEFQCILGTAVLDMYSKCGSLESARKLFNKLSS-RDLVLWN 382

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG-----MEVHA 585
           +MI+    +     A+ L   + + G + DH TFA++LSA +    +E G       +  
Sbjct: 383 AMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITE 442

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISG 636
            G+    +  V +    VD+ ++ G ++ A+     M     +  W +++SG
Sbjct: 443 FGIEPTEKHCVCV----VDLLARSGLVEEANEMLASMHTEPTIPIWVALLSG 490



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 196/433 (45%), Gaps = 61/433 (14%)

Query: 157 SWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ 216
           +WN++++  S+ G   +  ++F          S +P+  TF   +TA   + L      +
Sbjct: 79  AWNALLAARSRAGSPGAALRVF-----RALPSSARPDSTTFTLALTAC--ARLGDLDAAE 131

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG----- 271
            +      AG   D++V SAL+  ++R G    A ++F+ M +K+ V+ + ++ G     
Sbjct: 132 AVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAG 191

Query: 272 ------------------------------------RRKGKEVHGYLIRSGLFDMVAVGN 295
                                                R G  VHG  +R G+   V +  
Sbjct: 192 RPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIAT 251

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMS 355
            LV+MYAK G  D +R VFR M  +++VSWN +ISG  QNG  +EA+  F  M   GL  
Sbjct: 252 SLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQP 311

Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
            + +L+S L +CA +G++ LG+ IHG  L+  L+    +  A+L +Y+  G L    K+F
Sbjct: 312 DSGALVSALLACADVGFLKLGKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLF 370

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
             +   D V WN++I A   +     +A+  + ++   G  P+  TF ++L+A S   + 
Sbjct: 371 NKLSSRDLVLWNAMI-ACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLV 429

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSC------YGKCGEMDDCEKIFARMSERRDEVSW 529
           + G     ++I      E  IE     C        + G +++  ++ A M        W
Sbjct: 430 EEGKFWFDRMI-----TEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIW 484

Query: 530 NSMISGYIHNELL 542
            +++SG ++N+ L
Sbjct: 485 VALLSGCLNNKKL 497



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 118/512 (23%), Positives = 221/512 (43%), Gaps = 51/512 (9%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+   ++    G+  DVF+C+ L++VY R G +  A ++FD MP ++ V+W+ +V+G+  
Sbjct: 130 AEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVS 189

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   EA  M+  M   G   +   +  V++AC   G +  + G  VH   L+     D 
Sbjct: 190 AGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNT--RMGASVHGRFLRHGMRMDV 247

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +++  L+ MY       D AR++F  +  R+ +SWN++IS ++Q G       LF  M  
Sbjct: 248 VIATSLVDMYAKN-GHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMST 306

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G    L+P+    G+L++A  +    G   L + +       L     +G+A++  +++
Sbjct: 307 SG----LQPDS---GALVSALLACADVGFLKLGKSIHGFILRRLEFQCILGTAVLDMYSK 359

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLI------RSGLFDMVAVGNGL 297
            G+   ARK+F ++  +++V  N ++         H  L        +G+    A    L
Sbjct: 360 CGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASL 419

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNT-----MISGLDQNGCYEEAIMNFCAMRRDG 352
           ++  +  G +++ +  F  MI +  +         ++  L ++G  EEA     +M  + 
Sbjct: 420 LSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEP 479

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
            +    +L   LS C +   + LG+ I  + L+     D+ V   + +LYA A    +  
Sbjct: 480 TIPIWVAL---LSGCLNNKKLELGETIAKKILE-SQPEDIGVLALVSNLYAAAKKWDKVR 535

Query: 413 KVFFLMPE--HDQVSWNSVIGAFADSEALVSE-------------AVKYYLDMRRAGWSP 457
           ++  LM +    +V   S+I       A V E               K   +MR+ G+ P
Sbjct: 536 EIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMISKLSFEMRKMGYVP 595

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
                       + F    L   V  Q++ Y+
Sbjct: 596 R-----------TEFVYHDLDEDVKEQLLSYH 616


>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 223/542 (41%), Positives = 325/542 (59%), Gaps = 35/542 (6%)

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           SWNSVI   A S   V EA++ +  MR+    PN  TF   + + S+      G Q H Q
Sbjct: 43  SWNSVIAELARSGDSV-EALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQ 101

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER--------------------- 523
            + +    +  + +AL+  Y KCGE+ D   +F  +S R                     
Sbjct: 102 ALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRA 161

Query: 524 ---------RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACAS 573
                    RD +SWNS+I+ Y  N +  ++M +   M++ G+   +  T + VL ACA 
Sbjct: 162 LRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAH 221

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
             +   G  +H   ++  LE +V +G++++DMY KCG+++ A + FD M  +NV SW++M
Sbjct: 222 SGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAM 281

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           ++GY  HGH  +AL +F +M + G  P+++TFV VL+ACSHAGL++EG+  FK+MS  + 
Sbjct: 282 VAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFD 341

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           + P +E + CMVDLLGRAG L +  + I  M + P+ ++W  +LGA CR + +  +LG  
Sbjct: 342 VEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGA-CRMH-KNVDLGEI 399

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
           +A  LFE++P+N   YVLL+N+YA  G+WEDV + R  MK + + K  G S V +K  VH
Sbjct: 400 SARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVH 459

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
           VF+ GD  HP+ + IYE L++L+ K+++ GYVP     L D+  E KE ++  HSEK+AV
Sbjct: 460 VFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAV 519

Query: 874 AF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           AF ++       I I+KNLRVCGDCH+A KFISKIV REIV+RDS RFHHF DG CSCGD
Sbjct: 520 AFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGD 579

Query: 933 YW 934
           YW
Sbjct: 580 YW 581



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 183/403 (45%), Gaps = 68/403 (16%)

Query: 312 SVFRFMIGKDSV-SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
           ++F   + K +V SWN++I+ L ++G   EA+  F +MR+  L  +  +    + SC++L
Sbjct: 30  TLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSAL 89

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL---------------------- 408
             +  G+Q H + L  G + D+ VS+AL+ +Y+  G L                      
Sbjct: 90  LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 149

Query: 409 ---------SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG-WSPN 458
                     R L+VF  M E D +SWNS+I  +A +  + +E+++ +  M + G  + N
Sbjct: 150 TGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQN-GMSTESMEIFHRMVKDGEINYN 208

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
            VT   +L A +     +LG  +H QVIK  + +   +  +++  Y KCG+++   K F 
Sbjct: 209 AVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFD 268

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
           RM E+  + SW++M++GY  +    +A+ + + M   G + ++ TF +VL+AC+    LE
Sbjct: 269 RMREKNVK-SWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLE 327

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
            G                                   S  FD+ P   V  +  M+    
Sbjct: 328 EGWH----------------------------WFKAMSHEFDVEP--GVEHYGCMVDLLG 357

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           R G+  +A  L   MKL    PD V +  +L AC     VD G
Sbjct: 358 RAGYLKEAFDLIKGMKLR---PDFVVWGALLGACRMHKNVDLG 397



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 150/362 (41%), Gaps = 89/362 (24%)

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA--AYSS 207
           ++  ++ SWNS+I+  ++ GD++   + FS M++     SLKPN  TF   I +  A   
Sbjct: 36  VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRK----LSLKPNRSTFPCAIKSCSALLD 91

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR---------------- 251
           + SG    QQ L      G   DL+V SALV  +++ G    AR                
Sbjct: 92  LHSGRQAHQQALIF----GFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTS 147

Query: 252 ---------------KIFEQMIQKNVVSMNGLME-------------------------- 270
                          ++F+ M +++V+S N ++                           
Sbjct: 148 MITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINY 207

Query: 271 ----------------GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                            +R GK +H  +I+ GL   V VG  +++MY KCG ++ +R  F
Sbjct: 208 NAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAF 267

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             M  K+  SW+ M++G   +G  +EA+  F  M   G+  +  + +S L++C+  G + 
Sbjct: 268 DRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLE 327

Query: 375 LG-QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC---LKVFFLMPEHDQVSWNSVI 430
            G         +  ++  V     ++ L   AGYL      +K   L P  D V W +++
Sbjct: 328 EGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRP--DFVVWGALL 385

Query: 431 GA 432
           GA
Sbjct: 386 GA 387



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 146/344 (42%), Gaps = 54/344 (15%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK--- 64
           H Q L  GF  D+F+ + L+++Y + G+L  A  LFDE+  RN VSW  +++GY      
Sbjct: 99  HQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDA 158

Query: 65  ----------------------------GMSNEACKMFKEMVRAGFL-LNRYALGSVLRA 95
                                       GMS E+ ++F  MV+ G +  N   L +VL A
Sbjct: 159 HRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLA 218

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDL 155
           C   G    + G  +H  V+K     +  V   +I MY  C    + AR+ F+ +  +++
Sbjct: 219 CAHSGSQ--RLGKCIHDQVIKMGLESNVFVGTSIIDMYCKC-GKVEMARKAFDRMREKNV 275

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL 215
            SW+++++ Y   G      ++F  M   G    +KPN  TF S++ A      S + LL
Sbjct: 276 KSWSAMVAGYGMHGHAKEALEVFYEMNMAG----VKPNYITFVSVLAAC-----SHAGLL 326

Query: 216 QQILAMVKKAGLLSDLYVG----SALVSGFARLGNFYYARKIFEQM-IQKNVVSMNGLME 270
           ++     K      D+  G      +V    R G    A  + + M ++ + V    L+ 
Sbjct: 327 EEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLG 386

Query: 271 GRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAKCGTIDD 309
             R  K V  G +    LF++     G    L N+YA  G  +D
Sbjct: 387 ACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWED 430



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 40/272 (14%)

Query: 32  RVGDLASASKLFDEMPDRNSV-SWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
           R  +  + + LF++  D+ +V SW  +++     G S EA + F  M +     NR    
Sbjct: 21  RYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFP 80

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC-------- 142
             +++C          G Q H   L      D  VS+ L+ MY  C E  D         
Sbjct: 81  CAIKSCSAL--LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEIS 138

Query: 143 ----------------------ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
                                 A R+F+ +  RD+ISWNSII+VY+Q G +    ++F R
Sbjct: 139 HRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHR 198

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ-ILAMVKKAGLLSDLYVGSALVS 239
           M ++G    +  N  T  +++ A      SGS  L + I   V K GL S+++VG++++ 
Sbjct: 199 MVKDG---EINYNAVTLSAVLLACAH---SGSQRLGKCIHDQVIKMGLESNVFVGTSIID 252

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
            + + G    ARK F++M +KNV S + ++ G
Sbjct: 253 MYCKCGKVEMARKAFDRMREKNVKSWSAMVAG 284



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 142/314 (45%), Gaps = 21/314 (6%)

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F +  ++ +  SWNS+I+    +    +A+     M +   + +  TF   + +C+++ 
Sbjct: 31  LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            L  G + H   +    E D+ + SALVDMYSKCG +  A   FD +  RN+ SW SMI+
Sbjct: 91  DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 150

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
           GY ++    +AL +F  M       D +++  +++  +  G+  E  + F  M +   + 
Sbjct: 151 GYVQNDDAHRALRVFDGM----AERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEIN 206

Query: 696 PQLEQFSCMVDLLGRAG--ELDK-IEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
                 S ++     +G   L K I + + KM +  N  +  +++   C+  C K E+ R
Sbjct: 207 YNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCK--CGKVEMAR 264

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKE--------AGCS 804
           KA +    M  +N  ++  +   Y   G  ++  +    M  A VK          A CS
Sbjct: 265 KAFD---RMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACS 321

Query: 805 WV-TMKDGVHVFVA 817
               +++G H F A
Sbjct: 322 HAGLLEEGWHWFKA 335



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 54/97 (55%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H Q++K G   +VF+  ++I++Y + G +  A K FD M ++N  SW+ +V+GY  
Sbjct: 228 GKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGM 287

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G + EA ++F EM  AG   N     SVL AC   G
Sbjct: 288 HGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAG 324


>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
          Length = 730

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/639 (35%), Positives = 368/639 (57%), Gaps = 17/639 (2%)

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
           D+R +F  M  ++ V+W  +++G   N      +  F  M   G   S+++L +TL++C 
Sbjct: 91  DARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACL 150

Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
           +   + LG+Q+HG  +K G +S  S+ N+L SLYA  G L   L+ F+ +PE + ++W +
Sbjct: 151 ASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTT 210

Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
           +I A A+ E  V   +  ++DM   G  PN  T  ++++   +     LG QV A   K 
Sbjct: 211 MISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKI 270

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH------NELL 542
                  ++N+ +  Y + GE D+  ++F +M E    ++WN+MISGY        ++L 
Sbjct: 271 GCETNLPVKNSTMYLYLRKGETDEAMRLFEQM-EDASIITWNAMISGYAQIMDSAKDDLQ 329

Query: 543 PK-----AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
            +     A+ +   + +   + D FTF+++LS C+++  LE+G ++HA  +++    DVV
Sbjct: 330 ARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVV 389

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           + SALV+MY+KCG I  A++ F  MP R   +W SMISGY++HG   +A+ LF +M+L G
Sbjct: 390 VNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAG 449

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
             P+ +TFV +LSACS+AGLV+E   +F  M + Y + P ++ + CM+D+  R G ++  
Sbjct: 450 VRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDA 509

Query: 718 EEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYA 777
             FI +    PN  IW +++ A CR++    EL   AA+ L E++P+    Y+LL NMY 
Sbjct: 510 FSFIKRTGFEPNEAIWSSLV-AGCRSHG-NMELAFYAADKLLELKPKGIETYILLLNMYI 567

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
           S  +W+DVA+ RK MK+ +V      SW+T+KD V+ F A D +HP+   +Y+ L+ L +
Sbjct: 568 STERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLE 627

Query: 838 KMRDAGYVPQTKFALFDLEPESKEDL--VSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVC 894
           K +  GY P     L D E + K     + +HSE++AVA  L +      +R+ KN+ +C
Sbjct: 628 KAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMC 687

Query: 895 GDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
            DCHS+ K  S +  REI++RDS R H F DG+CSCGD+
Sbjct: 688 RDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 726



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 200/386 (51%), Gaps = 14/386 (3%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK+VHGY I+ G   + ++GN L ++YAK G++D +   F  +  K+ ++W TMIS   +
Sbjct: 158 GKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAE 217

Query: 335 N-GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           +  C E  +  F  M  DG+M + F+L S +S C +   + LG+Q+     K+G ++++ 
Sbjct: 218 DEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLP 277

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA--------DSEALVS--EA 443
           V N+ + LY   G     +++F  M +   ++WN++I  +A        D +A     +A
Sbjct: 278 VKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQA 337

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           +  + D++R+   P+  TF +IL+  S+    + G Q+HAQ IK    ++  + +AL++ 
Sbjct: 338 LTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNM 397

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           Y KCG + D  K F  M   R  V+W SMISGY  +    +A+ L   M   G R +  T
Sbjct: 398 YNKCGCIQDANKAFLEMPT-RTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEIT 456

Query: 564 FATVLSACASVATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           F ++LSAC+    +E          +  C+E  V     ++DM+ + GR++ A  F    
Sbjct: 457 FVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRT 516

Query: 623 PVR-NVYSWNSMISGYARHGHGDKAL 647
               N   W+S+++G   HG+ + A 
Sbjct: 517 GFEPNEAIWSSLVAGCRSHGNMELAF 542



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 177/392 (45%), Gaps = 70/392 (17%)

Query: 39  ASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQE 98
           A +LFD MP+RN V+W  +V+GYT         ++F EM+  G   + Y LG+ L AC  
Sbjct: 92  ARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNAC-- 149

Query: 99  CGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISW 158
                   G QVH   +K        + N L ++Y   L S D A R F  I  +++I+W
Sbjct: 150 LASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAK-LGSLDSALRAFWRIPEKNVITW 208

Query: 159 NSIISVYSQRGDTISV-FKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL-- 215
            ++IS  ++  + + +   LF  M  +G    + PNE+T  S+++      L G+ L   
Sbjct: 209 TTMISACAEDEECVELGMSLFIDMLMDG----VMPNEFTLTSVMS------LCGTRLDLN 258

Query: 216 --QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-- 271
             +Q+ A   K G  ++L V ++ +  + R G    A ++FEQM   ++++ N ++ G  
Sbjct: 259 LGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYA 318

Query: 272 ------------RRKG--------------------------------------KEVHGY 281
                       R +G                                      +++H  
Sbjct: 319 QIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQ 378

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
            I+SG    V V + LVNMY KCG I D+   F  M  +  V+W +MISG  Q+G  +EA
Sbjct: 379 TIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEA 438

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           I  F  MR  G+  +  + +S LS+C+  G +
Sbjct: 439 IQLFEEMRLAGVRPNEITFVSLLSACSYAGLV 470



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 138/281 (49%), Gaps = 25/281 (8%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   +K+G      + N+L ++Y ++G L SA + F  +P++N ++W  ++S     
Sbjct: 159 KQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAE- 217

Query: 65  GMSNEAC-----KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
              +E C      +F +M+  G + N + L SV+  C          G QV     K   
Sbjct: 218 ---DEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGT--RLDLNLGKQVQAFSFKIGC 272

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQ-----RGDTISV 174
             +  V N  + +Y    E TD A R+FE++E   +I+WN++IS Y+Q     + D  + 
Sbjct: 273 ETNLPVKNSTMYLYLRKGE-TDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQAR 331

Query: 175 FKLFSRMQ--REGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSD 230
            + F  +   R+  R  +KP+ +TF S+++  +A  ++  G    +QI A   K+G LSD
Sbjct: 332 SRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQG----EQIHAQTIKSGFLSD 387

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           + V SALV+ + + G    A K F +M  +  V+   ++ G
Sbjct: 388 VVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISG 428



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 53/94 (56%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H Q +K GF  DV + + L+N+Y + G +  A+K F EMP R  V+W  ++SGY+  G 
Sbjct: 375 IHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQ 434

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
             EA ++F+EM  AG   N     S+L AC   G
Sbjct: 435 PQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAG 468


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 247/745 (33%), Positives = 385/745 (51%), Gaps = 85/745 (11%)

Query: 232 YVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN----------GLMEGRRKGKEVHGY 281
           ++ + ++ G+ +  +   A  +++ M++ NV + N           +      GK +  +
Sbjct: 92  FICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDH 151

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           +++ G    V + N L+NMYA CG + D+R VF      D VSWN+M++G    G  EEA
Sbjct: 152 VLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEA 211

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
              +  M                                        + +V  SN+++ L
Sbjct: 212 KDVYDRMP---------------------------------------ERNVIASNSMIVL 232

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           +   G +    K+F  M + D VSW+++I  +  +E +  EA+  + +M   G   + V 
Sbjct: 233 FGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNE-MYEEALILFKEMNANGIMVDEVV 291

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL------------------SC 503
            +++L+A S   +   G  VH  V+K  +     ++NAL+                  SC
Sbjct: 292 VLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESC 351

Query: 504 -------------YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
                        Y KCGE++    +F  M ++ D VSW++MISGY   +   + + L  
Sbjct: 352 CLDQISWNSMISGYVKCGEIEKARALFDSMPDK-DNVSWSAMISGYAQQDRFTETLVLFQ 410

Query: 551 FMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCG 610
            M   G + D     +V+SAC  +A L++G  +HA   +  L+ ++++G+ L++MY K G
Sbjct: 411 EMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLG 470

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
            ++ A   F  +  + V +WN++I G A +G  DK+L  FS+MK  G  P+ +TFV VL 
Sbjct: 471 CVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLG 530

Query: 671 ACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNS 730
           AC H GLVDEG +HF SM Q + + P ++ + CMVDLLGRAG L + EE I  MP+ P+ 
Sbjct: 531 ACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDV 590

Query: 731 LIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARK 790
             W  +LGAC +      E G +    L E+ P +    VLL+N+YAS G W DV + R 
Sbjct: 591 STWGALLGACKKYG--DNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRG 648

Query: 791 AMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKF 850
            M++  V K  GCS +     VH F+AGD++HP+ + I   L E+ +K++  GY P T+ 
Sbjct: 649 MMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTRE 708

Query: 851 ALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVG 909
              D++ E KE  +  HSEK+A+AF ++  +   PIRI+KNLR+C DCH+A K ISK   
Sbjct: 709 VSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFN 768

Query: 910 REIVLRDSNRFHHFNDGKCSCGDYW 934
           REIV+RD +RFHHF  G CSC DYW
Sbjct: 769 REIVVRDRHRFHHFKQGSCSCMDYW 793



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 132/568 (23%), Positives = 251/568 (44%), Gaps = 62/568 (10%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVG--DLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           Q++  GF  D F  + L+     +   ++  + ++F  + + N      ++ GY  +   
Sbjct: 48  QMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYMQRNSP 107

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            +A  ++K M+ +    + Y    + ++C           +Q H  VLK     D  + N
Sbjct: 108 CKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDH--VLKVGFDSDVYIQN 165

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI MY  C   +D AR++F+     D++SWNS+++ Y   G+      ++ RM     R
Sbjct: 166 TLINMYAVCGNLSD-ARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPE---R 221

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             +  N      ++     +V     L  +   M +K     DL   SAL+S + +   +
Sbjct: 222 NVIASNSMI---VLFGKKGNVEEACKLFNE---MKQK-----DLVSWSALISCYEQNEMY 270

Query: 248 YYARKIFEQM-----IQKNVVSMNGLMEGRR-----KGKEVHGYLIRSGLFDMVAVGNGL 297
             A  +F++M     +   VV ++ L    R      GK VHG +++ G+   V + N L
Sbjct: 271 EEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNAL 330

Query: 298 VNMYA-------------------------------KCGTIDDSRSVFRFMIGKDSVSWN 326
           ++MY+                               KCG I+ +R++F  M  KD+VSW+
Sbjct: 331 IHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWS 390

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            MISG  Q   + E ++ F  M+ +G       L+S +S+C  L  +  G+ IH    K 
Sbjct: 391 AMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKN 450

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
           GL  ++ +   L+++Y   G +   L+VF  + E    +WN++I   A    LV +++K 
Sbjct: 451 GLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLA-MNGLVDKSLKT 509

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYG 505
           + +M+  G +PN +TF+ +L A     +   GH+  ++ + ++ +         ++   G
Sbjct: 510 FSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLG 569

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMI 533
           + G + + E++   M    D  +W +++
Sbjct: 570 RAGMLKEAEELIESMPMAPDVSTWGALL 597



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 140/533 (26%), Positives = 220/533 (41%), Gaps = 131/533 (24%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLF------------------- 43
           D K     +LK GF  DV++ NTLIN+Y   G+L+ A K+F                   
Sbjct: 144 DGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYV 203

Query: 44  ------------DEMPDRNS-------------------------------VSWACIVSG 60
                       D MP+RN                                VSW+ ++S 
Sbjct: 204 LVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISC 263

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN-Q 119
           Y    M  EA  +FKEM   G +++   + SVL AC          G  VH LV+K   +
Sbjct: 264 YEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRL--LVVITGKLVHGLVVKVGIE 321

Query: 120 TFDGLVSNVLIAMYGSCLE--------STDC----------------------ARRIFEE 149
           T+  L  N LI MY SC E        S  C                      AR +F+ 
Sbjct: 322 TYVNL-QNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDS 380

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA--YSS 207
           +  +D +SW+++IS Y+Q+        LF  MQ EG     KP+E    S+I+A    ++
Sbjct: 381 MPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEG----TKPDETILVSVISACTHLAA 436

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV----- 262
           +  G +    I A ++K GL  ++ +G+ L++ + +LG    A ++F+ + +K V     
Sbjct: 437 LDQGKW----IHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNA 492

Query: 263 ----VSMNGLMEGRRKG-KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
               ++MNGL++   K   E+  + +       VAV     +M    G +D+    F  M
Sbjct: 493 LILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHM----GLVDEGHRHFNSM 548

Query: 318 IGKDSVSWNT-----MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           I +  +  N      M+  L + G  +EA     +M     +S+  +L   L +C   G 
Sbjct: 549 IQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGAL---LGACKKYGD 605

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLKVFFLMPEHDQV 424
              G++I  + ++L  D D    N LLS +YA  G     L+V  +M +H  V
Sbjct: 606 NETGERIGRKLVELHPDHD--GFNVLLSNIYASKGNWVDVLEVRGMMRQHGVV 656



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/265 (20%), Positives = 116/265 (43%), Gaps = 34/265 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  I K+G   ++ L  TLIN+Y+++G +  A ++F  + ++   +W  ++ G   
Sbjct: 440 GKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAM 499

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+ +++ K F EM   G   N     +VL AC+  G            LV + ++ F+ 
Sbjct: 500 NGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMG------------LVDEGHRHFNS 547

Query: 124 LVSNVLIA----MYGSCLESTDCARRIFEEIE-------TRDLISWNSIISVYSQRGDTI 172
           ++    I      YG  ++    A  + E  E         D+ +W +++    + GD  
Sbjct: 548 MIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNE 607

Query: 173 SVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL-LQQILAMVKKAGLLSDL 231
           +  ++  ++        L P+   F  L++  Y+S   G+++ + ++  M+++ G++   
Sbjct: 608 TGERIGRKL------VELHPDHDGFNVLLSNIYAS--KGNWVDVLEVRGMMRQHGVVKT- 658

Query: 232 YVGSALVSGFARLGNFYYARKIFEQ 256
             G +++    R+  F    K   Q
Sbjct: 659 -PGCSMIEAHGRVHEFLAGDKTHPQ 682


>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
 gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 635

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/585 (38%), Positives = 347/585 (59%), Gaps = 14/585 (2%)

Query: 356 SNFSLI-STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
           SN +L+   L  CA  G +M  +  HG+ +++ L+ DV++ N L++ Y+  G++    +V
Sbjct: 59  SNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQV 118

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  M E   VSWN++IG +  +  + SEA+  +L+MR  G+  +  T  ++L+A      
Sbjct: 119 FDGMLERSLVSWNTMIGLYTRNR-MESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCD 177

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
                ++H   +K  +     +  ALL  Y KCG + D  ++F  M ++   V+W+SM++
Sbjct: 178 ALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK-SSVTWSSMVA 236

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRL----DHFTFATVLSACASVATLERGMEVHACGVRA 590
           GY+ N+   +A+     + +R QR+    + FT ++V+ AC+++A L  G ++HA   ++
Sbjct: 237 GYVQNKNYEEAL----LLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKS 292

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
               +V + S+ VDMY+KCG +  +   F  +  +N+  WN++ISG+A+H    + + LF
Sbjct: 293 GFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILF 352

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
            +M+ DG  P+ VTF  +LS C H GLV+EG + FK M   YGL P +  +SCMVD+LGR
Sbjct: 353 EKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGR 412

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
           AG L +  E I  +P  P + IW ++L A CR   +  EL   AA  LFE+EP+NA N+V
Sbjct: 413 AGLLSEAYELIKSIPFDPTASIWGSLL-ASCRVY-KNLELAEVAAEKLFELEPENAGNHV 470

Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
           LL+N+YA+  +WE++AK+RK +++ +VKK  G SW+ +KD VH F  G+  HP    I  
Sbjct: 471 LLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICS 530

Query: 831 KLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMK 889
            L  L  K R  GY P  +  L D+E   KE+L+  HSEK+A+ F ++      P+RIMK
Sbjct: 531 TLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMK 590

Query: 890 NLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           NLR+C DCH   K  S    R I++RD NRFHHF+DG CSCGD+W
Sbjct: 591 NLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 196/398 (49%), Gaps = 13/398 (3%)

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNG-LMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
           R  N +  R +  +++Q  + + NG +ME     K  HG +IR  L   V + N L+N Y
Sbjct: 53  RYSNEFSNRNLVHEILQ--LCARNGAVMEA----KACHGKIIRIDLEGDVTLLNVLINAY 106

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
           +KCG ++ +R VF  M+ +  VSWNTMI    +N    EA+  F  MR +G   S F++ 
Sbjct: 107 SKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTIS 166

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S LS+C      +  +++H   +K  +D ++ V  ALL LYA  G +   ++VF  M + 
Sbjct: 167 SVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK 226

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
             V+W+S++  +  ++    EA+  Y   +R     N  T  +++ A S+ +    G Q+
Sbjct: 227 SSVTWSSMVAGYVQNKNY-EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQM 285

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           HA + K    +   + ++ +  Y KCG + +   IF+ + E+  E+ WN++ISG+  +  
Sbjct: 286 HAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLEL-WNTIISGFAKHAR 344

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC--LEFDVVIG 599
             + M L   M Q G   +  TF+++LS C     +E G       +R    L  +VV  
Sbjct: 345 PKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL-MRTTYGLSPNVVHY 403

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISG 636
           S +VD+  + G +  A      +P     S W S+++ 
Sbjct: 404 SCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 175/351 (49%), Gaps = 22/351 (6%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           +AK  H +I++     DV L N LIN Y + G +  A ++FD M +R+ VSW  ++  YT
Sbjct: 79  EAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT 138

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQ-ECGPSGFKFGMQVHCLVLKSNQTF 121
              M +EA  +F EM   GF  + + + SVL AC   C     K   ++HCL +K+    
Sbjct: 139 RNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECK---KLHCLSVKTCIDL 195

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V   L+ +Y  C    D A ++FE ++ +  ++W+S+++ Y Q  +      L+ R 
Sbjct: 196 NLYVGTALLDLYAKCGMIKD-AVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRA 254

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           Q    R SL+ N++T  S+I A   S L+     +Q+ A++ K+G  S+++V S+ V  +
Sbjct: 255 Q----RMSLEQNQFTLSSVICAC--SNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMY 308

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLI------RSGLFDMVAVGN 295
           A+ G+   +  IF ++ +KN+   N ++ G  K       +I      + G+       +
Sbjct: 309 AKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFS 368

Query: 296 GLVNMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA 341
            L+++    G +++ R  F+ M     +  + V ++ M+  L + G   EA
Sbjct: 369 SLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 419


>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
          Length = 681

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 222/581 (38%), Positives = 338/581 (58%), Gaps = 8/581 (1%)

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
           S+ F+L   LS+CA LG +  G+ +       G   DV V ++LL LYA  G +   +KV
Sbjct: 108 STTFTL--ALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKV 165

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  MP  D+V+W++++  F  S     +A++ Y  MR  G   + V  I ++ A ++   
Sbjct: 166 FDRMPRRDRVTWSTMVAGFV-SAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARN 224

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
            ++G  VH  ++++ +  +     +L+  Y K G +D   ++F  M  R D VSW++MIS
Sbjct: 225 VRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRND-VSWSAMIS 283

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           G+  N    +A+ L   M   G + D     + L AC+++  L+ G  VH   VR   +F
Sbjct: 284 GFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDF 342

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           + ++G+A +DMYSKCG +  A   F+++  R++  WN+MI+    HG G  ALTLF +M 
Sbjct: 343 NCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMN 402

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
             G  PDH TF  +LSA SH+GLV+EG   F  M   + + P  + + C+VDLL R+G +
Sbjct: 403 ETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLV 462

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
           ++  + +  M   P   IW  +L  C   N +K ELG   A+ + E++P +     L++N
Sbjct: 463 EEASDLLTSMKAEPTVAIWVALLSGCL--NNKKLELGESIADNILELQPDDVGVLALVSN 520

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           +YA+  KW+ V + RK MK++  KK  GCS + ++   H F+  D+SHP+++ I  K+ +
Sbjct: 521 LYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAK 580

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRV 893
           L+ +MR  GY+P+T+F   DLE E KE  +SYHSEK+A+AF +L       + I+KNLRV
Sbjct: 581 LDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRV 640

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CGDCH A K+ISKI  REIV+RD+ RFHHF DG CSC DYW
Sbjct: 641 CGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 183/369 (49%), Gaps = 11/369 (2%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R G+ V      +G  D V V + L+++YA+ G + D+  VF  M  +D V+W+TM++G 
Sbjct: 125 RGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGF 184

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
              G   +AI  +  MR DG+      +I  + +C +   + +G  +HG  L+ G+  DV
Sbjct: 185 VSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDV 244

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
             + +L+ +YA  G L    +VF LM   + VSW+++I  FA +     EA++ + +M+ 
Sbjct: 245 VTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQN-GQSDEALRLFRNMQA 303

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           +G  P+    ++ L A S+    KLG  VH  +++    N   +  A +  Y KCG +  
Sbjct: 304 SGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDFN-CILGTAAIDMYSKCGSLAS 362

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
            + +F  +S+ RD + WN+MI+    +     A+ L   M + G R DH TFA++LSA +
Sbjct: 363 AQMLFNMISD-RDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALS 421

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSA----LVDMYSKCGRIDYASRFFDLMPVR-NV 627
               +E G     C V     F +         LVD+ ++ G ++ AS     M     V
Sbjct: 422 HSGLVEEGKLWFGCMVN---HFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTV 478

Query: 628 YSWNSMISG 636
             W +++SG
Sbjct: 479 AIWVALLSG 487



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 194/423 (45%), Gaps = 57/423 (13%)

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVK 223
           +S+RG   S  ++F          + +P+  TF   ++A A    L G    + +     
Sbjct: 84  HSRRGSPASALRVF-----RALPPAARPDSTTFTLALSACARLGDLRGG---ESVRDRAF 135

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG------------ 271
            AG   D++V S+L+  +AR G    A K+F++M +++ V+ + ++ G            
Sbjct: 136 DAGYKDDVFVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQ 195

Query: 272 -----------------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
                                         R G  VHG+L+R G+   V     LV+MYA
Sbjct: 196 MYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYA 255

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIS 362
           K G +D +  VF  M+ ++ VSW+ MISG  QNG  +EA+  F  M+  G+   + +L+S
Sbjct: 256 KNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVS 315

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
            L +C+++G++ LG+ +HG  ++   D +  +  A + +Y+  G L+    +F ++ + D
Sbjct: 316 ALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRD 374

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM---GKLGH 479
            + WN++I A   +     +A+  + +M   G  P+  TF ++L+A S   +   GKL  
Sbjct: 375 LILWNAMI-ACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWF 433

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
                  K   A +  +   L+    + G +++   +   M        W +++SG ++N
Sbjct: 434 GCMVNHFKITPAEKHYV--CLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNN 491

Query: 540 ELL 542
           + L
Sbjct: 492 KKL 494



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 123/546 (22%), Positives = 239/546 (43%), Gaps = 63/546 (11%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G+  DVF+C++L+++Y R G +  A K+FD MP R+ V+W+ +V+G+   G   +A +M+
Sbjct: 138 GYKDDVFVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMY 197

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
           + M   G   +   +  V++AC        + G  VH  +L+     D + +  L+ MY 
Sbjct: 198 RRMREDGVKGDEVVMIGVIQACT--AARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYA 255

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
                 D A R+F  +  R+ +SW+++IS ++Q G +    +LF  MQ  G    ++P+ 
Sbjct: 256 KN-GLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASG----IQPDS 310

Query: 195 YTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
              G+L++A  +    G   L + +          +  +G+A +  +++ G+   A+ +F
Sbjct: 311 ---GALVSALLACSNIGFLKLGRSVHGFIVRRFDFNCILGTAAIDMYSKCGSLASAQMLF 367

Query: 255 EQMIQKNVVSMNGLM-----EGR-RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
             +  ++++  N ++      GR +    +   +  +G+    A    L++  +  G ++
Sbjct: 368 NMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVE 427

Query: 309 DSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           + +  F      F I      +  ++  L ++G  EEA     +M+ +  ++   +L   
Sbjct: 428 EGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVAL--- 484

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL------ 417
           LS C +   + LG+ I    L+L  D DV V   + +LYA      +  +V  L      
Sbjct: 485 LSGCLNNKKLELGESIADNILELQPD-DVGVLALVSNLYAATKKWDKVRQVRKLMKDSGS 543

Query: 418 --MPEHDQVSWNSVIGAF-------ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
             MP    +       AF          E +VS+  K  L+MR+ G+ P           
Sbjct: 544 KKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKLDLEMRKMGYIPR---------- 593

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC-----------YGKCGEMDDCEKIF 517
            + F    L  +V  Q + Y+ + +  I   LL+               CG+  D  K  
Sbjct: 594 -TEFVYHDLEEEVKEQQLSYH-SEKLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYI 651

Query: 518 ARMSER 523
           +++++R
Sbjct: 652 SKIADR 657



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 148/324 (45%), Gaps = 19/324 (5%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +L+HG   DV    +L+++Y + G L  A ++F  M  RN VSW+ ++SG+   G S
Sbjct: 232 HGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQS 291

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           +EA ++F+ M  +G   +  AL S L AC   G    K G  VH  +++    F+ ++  
Sbjct: 292 DEALRLFRNMQASGIQPDSGALVSALLACSNIG--FLKLGRSVHGFIVRRFD-FNCILGT 348

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
             I MY  C  S   A+ +F  I  RDLI WN++I+     G       LF  M   G R
Sbjct: 349 AAIDMYSKC-GSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMR 407

Query: 188 YSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
               P+  TF SL++A ++S ++    L    +    K       YV   LV   AR G 
Sbjct: 408 ----PDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYV--CLVDLLARSGL 461

Query: 247 FYYARKIFEQMIQKNVVSM-NGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNGLV----NM 300
              A  +   M  +  V++   L+ G    K++  G  I   + ++     G++    N+
Sbjct: 462 VEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNL 521

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVS 324
           YA     D  R V + M  KDS S
Sbjct: 522 YAATKKWDKVRQVRKLM--KDSGS 543



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/396 (22%), Positives = 177/396 (44%), Gaps = 49/396 (12%)

Query: 22  LCNTLINVYVRVGDLASA-SKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRA 80
           L ++L   Y R GDLA+A S L       +  +W  I++ ++ +G    A ++F+ +  A
Sbjct: 44  LISSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRRGSPASALRVFRALPPA 103

Query: 81  GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST 140
               +       L AC   G    + G  V      +    D  V + L+ +Y       
Sbjct: 104 A-RPDSTTFTLALSACARLG--DLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMG 160

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
           D A ++F+ +  RD ++W+++++ +   G  +   +++ RM+ +G    +K +E     +
Sbjct: 161 D-AVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDG----VKGDEVVMIGV 215

Query: 201 I---TAAYSSVLSGS---YLLQQILAM-VKKAGLLSDLYVG------------------- 234
           I   TAA +  +  S   +LL+  + M V  A  L D+Y                     
Sbjct: 216 IQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRND 275

Query: 235 ---SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------RKGKEVHGY 281
              SA++SGFA+ G    A ++F  M    +   +G +             + G+ VHG+
Sbjct: 276 VSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGF 335

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           ++R   F+ + +G   ++MY+KCG++  ++ +F  +  +D + WN MI+    +G  ++A
Sbjct: 336 IVRRFDFNCI-LGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDA 394

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
           +  F  M   G+   + +  S LS+ +  G +  G+
Sbjct: 395 LTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGK 430


>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
 gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/668 (35%), Positives = 375/668 (56%), Gaps = 11/668 (1%)

Query: 273 RKGKEVHGYLI---RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
           R G+ +HG+LI   +S     V   N L+N+Y KCG    +R VF  M  ++ VSW  M+
Sbjct: 48  RTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMPERNVVSWCAMM 107

Query: 330 SGLDQNGCYEEAIMNFCAMR-RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
            G   +G   E +  F +M   D    + F       SC+S G I  G+Q HG  LK GL
Sbjct: 108 KGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEGKQFHGCFLKSGL 167

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
            S   V N L+ +Y+        ++V   +P  D   ++S +  + +  A   E  +   
Sbjct: 168 MSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAF-KEGAEVLR 226

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            M +     + +T+++ L   S+     L  Q+H+++++    +E     A+++ YGKCG
Sbjct: 227 RMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCG 286

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
           ++   +++F   +  ++ V   +++  Y  ++   +A+NL   M  +    + +TFA  L
Sbjct: 287 KVLYAQRVFDN-THAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISL 345

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
           ++ A ++ L+ G  +H   +++     V++G+ALV+MY+K G I+ A + F  M  R++ 
Sbjct: 346 NSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIV 405

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           +WN+MI G++ HG G + L  F +M + G +P+ +TF+GVL ACSH G V++G  +F  +
Sbjct: 406 TWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQL 465

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRK 747
            + + + P L+ ++C+V LL +AG     E+F+   PI  + + WR +L AC  R N R 
Sbjct: 466 MKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALLNACYVRRNFR- 524

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
             LG+K A       P ++  YVLL+N++A   +WE VA+ R  M +  VKKE G SW+ 
Sbjct: 525 --LGKKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEGVAEVRSLMNKRGVKKEPGVSWIG 582

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
           +++  HVF+A +  HPE  LIY K+KE+  K+R  GY P       D++ E +ED +SYH
Sbjct: 583 IRNQTHVFLAEENQHPEITLIYAKIKEVLSKIRPLGYSPDVAGVFHDVDEEQREDNLSYH 642

Query: 868 SEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SEK+AVA+ L +  +  P+ + KN+R+C DCHSA K ISKI  R IV+RDSNRFHHF DG
Sbjct: 643 SEKLAVAYGLMKTPENSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFRDG 702

Query: 927 KCSCGDYW 934
           +CSC DYW
Sbjct: 703 QCSCCDYW 710



 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 212/460 (46%), Gaps = 53/460 (11%)

Query: 17  AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKE 76
           A DV+  N+LIN+YV+ G+   A K+FD MP+RN VSW  ++ GY + G   E  K+FK 
Sbjct: 66  AKDVYQINSLINLYVKCGETVRARKVFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKS 125

Query: 77  MVRAG-FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS 135
           MV +     N +    V ++C   G    + G Q H   LKS       V N L+ MY  
Sbjct: 126 MVFSDESRPNEFVATVVFKSCSSSGR--IEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSL 183

Query: 136 CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
           C  + + A R+ +++   DL  ++S +S Y + G      ++  RM +E     L  +  
Sbjct: 184 CSGNGE-AIRVLDDLPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKE----DLVLDNI 238

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
           T+ S +     S L    L +QI + + + G  S++    A+++ + + G   YA+++F+
Sbjct: 239 TYLSCLRLC--SNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFD 296

Query: 256 QMIQKNVV---------------------------------------SMNGLMEGR--RK 274
               +N+V                                       S+N + E    + 
Sbjct: 297 NTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKH 356

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G  +HG +++SG  + V VGN LVNMYAK G+I+D+R  F  M  +D V+WNTMI G   
Sbjct: 357 GDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSH 416

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL-KLGLDSDVS 393
           +G   E +  F  M   G + +  + I  L +C+ +G++  G     + + K  +  D+ 
Sbjct: 417 HGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQ 476

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
               ++ L + AG            P E D V+W +++ A
Sbjct: 477 HYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALLNA 516



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 223/485 (45%), Gaps = 47/485 (9%)

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           L   A SS L     +   L +  ++    D+Y  ++L++ + + G    ARK+F+ M +
Sbjct: 38  LKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMPE 97

Query: 260 KNVVSMNGLMEGRR------------------------------------------KGKE 277
           +NVVS   +M+G +                                          +GK+
Sbjct: 98  RNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEGKQ 157

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
            HG  ++SGL     V N LV MY+ C    ++  V   +   D   +++ +SG  + G 
Sbjct: 158 FHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGA 217

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
           ++E       M ++ L+  N + +S L  C++L  + L +QIH   ++LG +S+V  S A
Sbjct: 218 FKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGA 277

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           ++++Y   G +    +VF      + V   +++ A+   ++   EA+  +  M      P
Sbjct: 278 IINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSF-EEALNLFSKMDTKEVPP 336

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           N  TF   L + +  S+ K G  +H  V+K    N   + NAL++ Y K G ++D  K F
Sbjct: 337 NEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF 396

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
           + M+  RD V+WN+MI G+ H+ L  + +     MM  G+  +  TF  VL AC+ V  +
Sbjct: 397 SGMT-FRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFV 455

Query: 578 ERGM-EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMIS 635
           E+G+   +    +  ++ D+   + +V + SK G    A  F    P+  +V +W ++++
Sbjct: 456 EQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALLN 515

Query: 636 G-YAR 639
             Y R
Sbjct: 516 ACYVR 520



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 159/352 (45%), Gaps = 22/352 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ K FH   LK G     F+ NTL+ +Y        A ++ D++P  +   ++  +SGY
Sbjct: 153 EEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   E  ++ + M +   +L+     S LR C            Q+H  +++     
Sbjct: 213 LECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNL--RDLNLARQIHSRMVRLGFNS 270

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +   S  +I MYG C +    A+R+F+    ++++   +I+  Y Q         LFS+M
Sbjct: 271 EVEASGAIINMYGKCGKVL-YAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKM 329

Query: 182 QREGFRYSLKPNEYTFG-SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
             +     + PNEYTF  SL + A  S+L    LL     +V K+G  + + VG+ALV+ 
Sbjct: 330 DTK----EVPPNEYTFAISLNSIAELSLLKHGDLLH---GLVLKSGYRNHVMVGNALVNM 382

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVG 294
           +A+ G+   ARK F  M  +++V+ N ++ G       R+G E    ++ +G        
Sbjct: 383 YAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITF 442

Query: 295 NGLVNMYAKCGTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEA 341
            G++   +  G ++     F     +F +  D   +  ++  L + G +++A
Sbjct: 443 IGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDA 494


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1005

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 272/867 (31%), Positives = 440/867 (50%), Gaps = 86/867 (9%)

Query: 19  DVFLCNTLINVYVRVGDLA------SASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACK 72
           DV   N+ I  Y  + +L       S  K+FDEM DR + +W  ++  Y   G    A  
Sbjct: 89  DVNGNNSPIEAYAYLLELCGKSRALSQEKVFDEMRDRTAFAWNALIGAYVSNGEPASALF 148

Query: 73  MFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAM 132
           +++ M   G  L+ Y+   +L+AC +      + G ++HC+++K      G + N L++M
Sbjct: 149 IYRNMRVEGVPLDLYSFPVLLKACGKL--RDIRSGTELHCMLVKLGFNSTGFIVNALVSM 206

Query: 133 YGSCLESTDCARRIFEEIETR-DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           Y    +    A+R+F+  + + D + WNSI+S YS  G ++   +LF    RE       
Sbjct: 207 YAKT-DHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLETLQLF----REMQMTGPA 261

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
            N YT                                        +VS       F YA+
Sbjct: 262 SNSYT----------------------------------------IVSALTACEGFSYAK 281

Query: 252 KIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
                                  GKE+H  +++S     V V N L+ MYA+CG + ++ 
Sbjct: 282 L----------------------GKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAG 319

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
            + R M   D V+WN++I G  QN  Y+EA+  FC M   G      SL S +++   L 
Sbjct: 320 RILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLS 379

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
            ++ G ++H   +K G DS++ V N L+ +Y+         + F +M E D +SW ++I 
Sbjct: 380 NLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIA 439

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA 491
            +A ++  V EA++ + D+ +     + +   +IL A S      +  ++H  +++  + 
Sbjct: 440 GYALNDCHV-EALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGLI 498

Query: 492 NETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWF 551
            +T I+N L+  YGKC  M    ++F  + + +D VSW SMIS    N    +A+ L   
Sbjct: 499 -DTVIQNELVDVYGKCRNMGYASRVFESI-KGKDVVSWTSMISSSALNGNENEAVELFRR 556

Query: 552 MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA--CLEFDVVIGSALVDMYSKC 609
           M + G   D      +LSA AS++ L++G E+H   +R   CLE  + +  A+VDMY+ C
Sbjct: 557 MAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAV--AVVDMYACC 614

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
           G +  A   FD +  + +  + SMI+ Y  HG G  ++ LF++M+ +   PDH++F+ +L
Sbjct: 615 GDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHISFLALL 674

Query: 670 SACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPN 729
            ACSHAGL+DEG +  K M   Y L P  E + C+VD+LGRA  + +  EF+  M   P 
Sbjct: 675 YACSHAGLLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPT 734

Query: 730 SLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKAR 789
           + +W  +L A CR++  K E+G  AA  L E+EP+N  N VL++N++A  G+W DV K R
Sbjct: 735 TEVWCALLAA-CRSHSEK-EIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVR 792

Query: 790 KAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM-RDAGYVPQT 848
             MK + ++K  GCSW+ M   VH F A D+SHPE   IYEKL E+ +K+ R++GY+  T
Sbjct: 793 AKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPETKEIYEKLSEVTRKLERESGYLADT 852

Query: 849 KFALFDLEPESKEDLVSYHSEKIAVAF 875
           KF L +++   K  ++  HSE++A+A+
Sbjct: 853 KFILHNVDEGEKVQMLHGHSERLAIAY 879



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 141/586 (24%), Positives = 250/586 (42%), Gaps = 97/586 (16%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +K  K  H  +LK   +++V++CN LI +Y R G +  A ++   M + + V+W  ++ G
Sbjct: 280 AKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKG 339

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y    M  EA + F +M+ AG   +  +L SV+ A      S    GM++H  V+K    
Sbjct: 340 YVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRL--SNLLAGMELHAYVIKHGWD 397

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            + LV N LI MY  C   T    R F  +  +DLISW +II+ Y+     +   +LF  
Sbjct: 398 SNLLVGNTLIDMYSKC-NLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLF-- 454

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
             R+  +  ++ +E   GS++ A   SVL    ++++I   + + GL+ D  + + LV  
Sbjct: 455 --RDVAKKRMEIDEMMLGSILRAC--SVLKSMLIVKEIHCHILRKGLI-DTVIQNELVDV 509

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------------------------- 272
           + +  N  YA ++FE +  K+VVS   ++                               
Sbjct: 510 YGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSVAL 569

Query: 273 -------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                        +KG+E+HGYL+R G     ++   +V+MYA CG +  +++VF  +  
Sbjct: 570 LCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIER 629

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           K  + + +MI+    +GC + ++  F  MR + +   + S ++ L +C+  G +  G+  
Sbjct: 630 KGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHISFLALLYACSHAGLLDEGR-- 687

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
                                         R LK+  L  E+    W        D    
Sbjct: 688 ------------------------------RFLKIMEL--EYKLEPWPEHYVCLVDMLGR 715

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS---MGKLGHQVHAQVIKYNVANETTI 496
            +  V+ +  ++     P    +  +LAA  S S   +G++  Q   ++   N  N   +
Sbjct: 716 ANCVVEAFEFVKMMKTEPTTEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLV 775

Query: 497 ENALLSCYGKCGEMDDCEKIFARMS----ERRDEVSWNSMISGYIH 538
            N     + + G  +D EK+ A+M     E+    SW  M  G +H
Sbjct: 776 SNV----FAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEM-DGKVH 816


>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 861

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 249/763 (32%), Positives = 406/763 (53%), Gaps = 72/763 (9%)

Query: 147 FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS 206
           F  +  RD++SWNS++S Y Q G+T+   ++F  M R G  +  +    TF  ++     
Sbjct: 95  FNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGR----TFAIILKVC-- 148

Query: 207 SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN 266
           S L  + L  QI  +V + G  +D+   SAL+  +A+   F  + ++F+ + +KN VS +
Sbjct: 149 SCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWS 208

Query: 267 GLMEG-----------------------------------------RRKGKEVHGYLIRS 285
            ++ G                                          R G ++H + ++S
Sbjct: 209 AIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKS 268

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
                  V    ++MYAKC  + D++ +F      +  S+N MI+G  Q     +A++ F
Sbjct: 269 DFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLF 328

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             +   GL     SL     +CA +  +  G QI+   +K  L  DV V+NA + +Y   
Sbjct: 329 HRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKC 388

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
             L+   +VF  M   D VSWN++I A  +      E +  ++ M R+   P+  TF ++
Sbjct: 389 QALAEAFRVFDEMRRRDAVSWNAIIAAH-EQNGKGYETLFLFVSMLRSRIEPDEFTFGSV 447

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           L A +  S+G  G ++H+ ++K  +A+ +++  +L+  Y KCG +++ EKI +R  +R +
Sbjct: 448 LKACTGGSLG-YGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTN 506

Query: 526 E-------------------VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
                               VSWNS+ISGY+  E    A  L   MM+ G   D FT+AT
Sbjct: 507 VSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYAT 566

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           VL  CA++A+   G ++HA  ++  L+ DV I S LVDMYSKCG +  +   F+    R+
Sbjct: 567 VLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRD 626

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
             +WN+MI GYA HG G++A+ LF +M L+   P+HVTF+ +L AC+H GL+D+G ++F 
Sbjct: 627 FVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFY 686

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
            M + YGL PQL  +S MVD+LG++G++ +  E I +MP   + +IWRT+LG C   +  
Sbjct: 687 MMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCT-IHRN 745

Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
             E+  +A   L  ++PQ++  Y LL+N+YA  G WE V+  R+ M+  ++KKE GCSWV
Sbjct: 746 NVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 805

Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR---DAGYVP 846
            +KD +HVF+ GD++HP  + IYE+L  +  +M+   D+ +VP
Sbjct: 806 ELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFVP 848



 Score =  232 bits (591), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 181/669 (27%), Positives = 322/669 (48%), Gaps = 78/669 (11%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV   N +IN Y +  ++  AS  F+ MP R+ VSW  ++SGY   G + ++ ++F +M 
Sbjct: 71  DVVSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMG 130

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           RAG   +      +L+ C     +    GMQ+H +V++     D + ++ L+ MY     
Sbjct: 131 RAGTEFDGRTFAIILKVCSCLEDTS--LGMQIHGVVVRVGCDTDVVAASALLDMYAKGKR 188

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             + + R+F+ I  ++ +SW++II+   Q        K F  MQ    + +   ++  + 
Sbjct: 189 FVE-SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ----KVNAGVSQSIYA 243

Query: 199 SLIT--AAYSSVLSGSYLLQQIL-------AMVKKAGLLSDLYVG--------------- 234
           S++   AA S +  G  L    L        +V+ A L  D+Y                 
Sbjct: 244 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL--DMYAKCDNMQDAQILFDKSE 301

Query: 235 -------SALVSGFARLGNFYYARKIFEQMIQKNV----VSMNG------LMEGRRKGKE 277
                  +A+++G+++  + + A  +F +++   +    +S++G      L++G  +G +
Sbjct: 302 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 361

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           ++   I+S L   V V N  ++MY KC  + ++  VF  M  +D+VSWN +I+  +QNG 
Sbjct: 362 IYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 421

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCA--SLGWIMLGQQIHGEGLKLGLDSDVSVS 395
             E +  F +M R  +    F+  S L +C   SLG+   G +IH   +K G+ S+ SV 
Sbjct: 422 GYETLFLFVSMLRSRIEPDEFTFGSVLKACTGGSLGY---GMEIHSSIVKSGMASNSSVG 478

Query: 396 NALLSLYADAGYLSRCLKV---FF-----------LMPEHDQ------VSWNSVIGAFAD 435
            +L+ +Y+  G +    K+   FF           L   H++      VSWNS+I  +  
Sbjct: 479 CSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVM 538

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
            E    +A   +  M   G +P+  T+  +L   ++ +   LG Q+HAQVIK  + ++  
Sbjct: 539 KEQ-SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVY 597

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           I + L+  Y KCG++ D   +F + S RRD V+WN+MI GY H+    +A+ L   M+  
Sbjct: 598 ISSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE 656

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRAC-LEFDVVIGSALVDMYSKCGRIDY 614
             + +H TF ++L ACA +  +++G+E      R   L+  +   S +VD+  K G++  
Sbjct: 657 NIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKR 716

Query: 615 ASRFFDLMP 623
           A      MP
Sbjct: 717 ALELIREMP 725



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 165/555 (29%), Positives = 264/555 (47%), Gaps = 60/555 (10%)

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
           R  L D+V+  N ++N YAK   +  +   F  M  +D VSWN+M+SG  QNG   ++I 
Sbjct: 66  RMPLRDVVS-WNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIE 124

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            F  M R G      +    L  C+ L    LG QIHG  +++G D+DV  ++ALL +YA
Sbjct: 125 VFVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYA 184

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
                   L+VF  +PE + VSW+++I     +  L+S A+K++ +M++     +   + 
Sbjct: 185 KGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNN-LLSLALKFFKEMQKVNAGVSQSIYA 243

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           ++L + ++ S  +LG Q+HA  +K + A +  +  A L  Y KC  M D + +F + SE 
Sbjct: 244 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDK-SEN 302

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
            +  S+N+MI+GY   E   KA+ L   +M  G   D  + + V  ACA V  L  G+++
Sbjct: 303 LNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQI 362

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           +   +++ L  DV + +A +DMY KC  +  A R FD M  R+  SWN++I+ + ++G G
Sbjct: 363 YDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKG 422

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACS----------HAGLVDEGFKHFKS------ 687
            + L LF  M      PD  TF  VL AC+          H+ +V  G     S      
Sbjct: 423 YETLFLFVSMLRSRIEPDEFTFGSVLKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLI 482

Query: 688 -MSQVYGLIPQLEQF-SCMVDLLGRAGELDKIEEFINK---------------------- 723
            M    G+I + E+  S        +G ++++E+  NK                      
Sbjct: 483 DMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQS 542

Query: 724 ------------MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV- 770
                       M ITP+   + TVL  C  AN     LG++    + + E Q+ V Y+ 
Sbjct: 543 EDAQMLFTRMMEMGITPDKFTYATVLDTC--ANLASAGLGKQIHAQVIKKELQSDV-YIS 599

Query: 771 -LLANMYASGGKWED 784
             L +MY+  G   D
Sbjct: 600 STLVDMYSKCGDLHD 614



 Score =  189 bits (479), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 146/588 (24%), Positives = 267/588 (45%), Gaps = 71/588 (12%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +++ G   DV   + L+++Y +      + ++F  +P++NSVSW+ I++G     +
Sbjct: 160 IHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNL 219

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            + A K FKEM +    +++    SVLR+C     S  + G Q+H   LKS+   DG+V 
Sbjct: 220 LSLALKFFKEMQKVNAGVSQSIYASVLRSC--AALSELRLGGQLHAHALKSDFAADGIVR 277

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
              + MY  C    D A+ +F++ E  +  S+N++I+ YSQ         LF R+   G 
Sbjct: 278 TATLDMYAKCDNMQD-AQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGL 336

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
            +    +E +   +  A   +++ G     QI  +  K+ L  D+ V +A +  + +   
Sbjct: 337 GF----DEISLSGVFRAC--ALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQA 390

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------------- 274
              A ++F++M +++ VS N ++    +                                
Sbjct: 391 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKA 450

Query: 275 --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF-RFM-------- 317
                   G E+H  +++SG+    +VG  L++MY+KCG I+++  +  RF         
Sbjct: 451 CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGT 510

Query: 318 -----------IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
                      + +  VSWN++ISG       E+A M F  M   G+    F+  + L +
Sbjct: 511 MEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDT 570

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSW 426
           CA+L    LG+QIH + +K  L SDV +S+ L+ +Y+  G L     +F      D V+W
Sbjct: 571 CANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTW 630

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
           N++I  +A       EA++ +  M      PN VTFI+IL A +   +   G +    + 
Sbjct: 631 NAMICGYA-HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMK 689

Query: 487 K-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           + Y +  +    + ++   GK G++    ++   M    D+V W +++
Sbjct: 690 RDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 737



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 164/347 (47%), Gaps = 31/347 (8%)

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSW 426
           CA  G + LG+Q H   +  G      V N LL +Y ++        VF  MP  D VSW
Sbjct: 16  CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75

Query: 427 NSVIGAFADSEALVS------------------------------EAVKYYLDMRRAGWS 456
           N +I  +A S  +V                               ++++ ++DM RAG  
Sbjct: 76  NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
            +G TF  IL   S      LG Q+H  V++     +    +ALL  Y K     +  ++
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F  + E ++ VSW+++I+G + N LL  A+     M +    +    +A+VL +CA+++ 
Sbjct: 196 FQGIPE-KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 254

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           L  G ++HA  +++    D ++ +A +DMY+KC  +  A   FD     N  S+N+MI+G
Sbjct: 255 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITG 314

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
           Y++  HG KAL LF ++   G   D ++  GV  AC+    + EG +
Sbjct: 315 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 361



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 200/452 (44%), Gaps = 91/452 (20%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S+  +++ L I K   + DV + N  I++Y +   LA A ++FDEM  R++VSW  I++ 
Sbjct: 357 SEGLQIYDLAI-KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 415

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           +   G   E   +F  M+R+    + +  GSVL+AC         +GM++H  ++KS   
Sbjct: 416 HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACT---GGSLGYGMEIHSSIVKSGMA 472

Query: 121 FDGLVSNVLIAMYGSC---LESTDCARRIF---------EEIETRD-------LISWNSI 161
            +  V   LI MY  C    E+     R F         EE+E           +SWNSI
Sbjct: 473 SNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSI 532

Query: 162 ISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAM 221
           IS Y  +  +     LF+RM   G    + P+++T+ +++    +  L+ + L +QI A 
Sbjct: 533 ISGYVMKEQSEDAQMLFTRMMEMG----ITPDKFTYATVLDTCAN--LASAGLGKQIHAQ 586

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY 281
           V K  L SD+Y+ S LV  +++ G+ + +R +FE+ ++++ V+ N ++ G          
Sbjct: 587 VIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICG---------- 636

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
                              YA  G  +++  +F  MI                       
Sbjct: 637 -------------------YAHHGKGEEAIQLFERMI----------------------- 654

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNALLS 400
                    + +  ++ + IS L +CA +G I  G +  +      GLD  +   + ++ 
Sbjct: 655 --------LENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVD 706

Query: 401 LYADAGYLSRCLKVFFLMP-EHDQVSWNSVIG 431
           +   +G + R L++   MP E D V W +++G
Sbjct: 707 ILGKSGKVKRALELIREMPFEADDVIWRTLLG 738



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 43/210 (20%)

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
           CA    LE G + HA  + +       + + L+ +Y+       AS  FD MP+R+V SW
Sbjct: 16  CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS- 689
           N MI+GYA+  +  KA   F+ M    P+ D V++  +LS     G   +  + F  M  
Sbjct: 76  NKMINGYAKSNNMVKASFFFNMM----PVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGR 131

Query: 690 ---------------------------QVYGLIPQLEQFSCMVDLLGRAGELD---KIEE 719
                                      Q++G++ ++    C  D++  +  LD   K + 
Sbjct: 132 AGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRV---GCDTDVVAASALLDMYAKGKR 188

Query: 720 FINKMPI-----TPNSLIWRTVLGACCRAN 744
           F+  + +       NS+ W  ++  C + N
Sbjct: 189 FVESLRVFQGIPEKNSVSWSAIIAGCVQNN 218


>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 259/798 (32%), Positives = 424/798 (53%), Gaps = 68/798 (8%)

Query: 200 LITAAYSSVLSGS---YLLQQILAMVKKAGLLSDLY---VG---------SALVSGFARL 244
           LI A ++S+   +   +L   ++    K G++ + Y   VG         +A++SGFA+ 
Sbjct: 90  LIKAVHASIFKLAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKS 149

Query: 245 GNFYYARKIFEQM----IQKNVVSMNGLME------GRRKGKEVHGYLIRSGLFDMVAVG 294
                A +IF +M    I+ N  S   ++           G ++H  +I+ G  +   V 
Sbjct: 150 NRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVS 209

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR-DGL 353
           N L+ +Y KCG +D    +F  M  +D  SWNT+IS + +   YE A   F  MRR DG 
Sbjct: 210 NALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGF 269

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR--- 410
              +F+L + L +   L   M+G++IH   +K+G +S++SV NAL+  Y   G +     
Sbjct: 270 RIDHFTLSTILVAARGLAS-MVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVA 328

Query: 411 ----------------------------CLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
                                        L+VF  MP  + +S+N+++  F  +    S+
Sbjct: 329 LFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGE-GSK 387

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           A+ ++  M   G      T   +L A       K+  Q+H  ++K+   +   IE ALL 
Sbjct: 388 ALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLD 447

Query: 503 CYGKCGEMDDCEKIFARMSERRDE-VSWNSMISGYIHNELLPKAMNLV-WFMMQRGQRLD 560
              +CG M D +K+F++ S  +   + W SMI GY  N    +A++L     ++    +D
Sbjct: 448 MCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVD 507

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
                 VL  C ++A  E G ++H   +++    D+ +G++++ MYSKC  +D A + F+
Sbjct: 508 KVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFN 567

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH--AGLV 678
           +MP  ++ SWN +I+G+  H  GD+AL+++S+M+  G  PD VTFV ++SA  H  + LV
Sbjct: 568 VMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLV 627

Query: 679 DEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
           D   + F SM  +Y + P +E ++ +V +LG  G L++ EE INKMPI P + +WR +L 
Sbjct: 628 DNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLD 687

Query: 739 ACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVK 798
           AC R +   T +G++AA  L  M+P +   Y+L++N+Y++ G+W      R+ M+    +
Sbjct: 688 AC-RIH-SNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFR 745

Query: 799 KEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPE 858
           K  G SW+  ++ VH F A D+SHP+   I+  L+ L  +   AGYVP T F L ++E  
Sbjct: 746 KHPGRSWIIHENKVHSFYARDKSHPQAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEH 805

Query: 859 SKEDLVSYHSEKIAVAF--VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRD 916
            K+D + YHS KIA  +  ++TR  + PIRI+KN+ +CGDCH+  K++S + GREI LRD
Sbjct: 806 QKKDFLFYHSAKIAATYGLLMTRPGR-PIRIVKNILLCGDCHTFLKYVSIVTGREIFLRD 864

Query: 917 SNRFHHFNDGKCSCGDYW 934
           ++  H F +G+CSC DYW
Sbjct: 865 ASGHHCFLNGQCSCKDYW 882



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 159/574 (27%), Positives = 278/574 (48%), Gaps = 55/574 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  I K   A D+ L N LI  Y+++G + +A K+F  +   N VS+  ++SG+   
Sbjct: 92  KAVHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKS 149

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS---NQTF 121
               +A ++F  M  +G  LN ++  ++L  C        + G Q+H +V+K    N TF
Sbjct: 150 NRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRL--LDLELGCQLHAIVIKMGFLNYTF 207

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              VSN L+ +YG C    D   ++F+E+  RD+ SWN++IS   +       F+LF  M
Sbjct: 208 ---VSNALMGLYGKC-GYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDM 263

Query: 182 QR-EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           +R +GFR     + +T  +++ AA       S + ++I A V K G  S++ V +AL+  
Sbjct: 264 RRIDGFRI----DHFTLSTILVAARGL---ASMVGREIHAHVIKIGFESNISVINALIRF 316

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
           + + G+             K+VV++   M  R                  V     ++  
Sbjct: 317 YTKCGSI------------KHVVALFEKMRVRD-----------------VITWTEMITA 347

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           Y + G  D +  VF  M  ++S+S+N ++SG  QNG   +A+  FC M  +G+  ++F+L
Sbjct: 348 YMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTL 407

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV--FFLM 418
              L++C  L    + +QIHG  LK G  S+  +  ALL +    G ++   K+      
Sbjct: 408 TGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSF 467

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG-WSPNGVTFINILAAASSFSMGKL 477
            +   + W S+I  +A + A   EA+  +   +  G    + V    +L    + +  ++
Sbjct: 468 SQSGSIIWTSMICGYARN-AQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEM 526

Query: 478 GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI 537
           G Q+H   +K    ++  + N++++ Y KC  MDD  K+F  M    D VSWN +I+G++
Sbjct: 527 GKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPA-HDIVSWNGLIAGHL 585

Query: 538 HNELLPKAMNLVWFMMQR-GQRLDHFTFATVLSA 570
            +    +A++ VW  M++ G + D  TF  ++SA
Sbjct: 586 LHRQGDEALS-VWSKMEKAGIKPDTVTFVLIISA 618



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 16/209 (7%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKL--FDEMPDRNSVSWACIV 58
           +K +K  H  ILK GF  +  +   L+++  R G +A A K+          S+ W  ++
Sbjct: 420 AKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMI 479

Query: 59  SGYTHKGMSNEACKMF-KEMVRAGFLLNRYALGSVLRACQECGPSGF-KFGMQVHCLVLK 116
            GY       EA  +F +  +    ++++ A  +VL     CG   F + G Q+HC  LK
Sbjct: 480 CGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGV---CGTLAFHEMGKQIHCHALK 536

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS--VYSQRGDTISV 174
           S    D  V N +I MY  C  + D A ++F  +   D++SWN +I+  +  ++GD    
Sbjct: 537 SGFLSDLGVGNSIITMYSKC-SNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGD--EA 593

Query: 175 FKLFSRMQREGFRYSLKPNEYTFGSLITA 203
             ++S+M++ G    +KP+  TF  +I+A
Sbjct: 594 LSVWSKMEKAG----IKPDTVTFVLIISA 618


>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Brachypodium distachyon]
          Length = 682

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 247/662 (37%), Positives = 374/662 (56%), Gaps = 11/662 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK +H  +IR+  FD++   N L+  Y KCG +  +R +F  M  +++VS N ++SG   
Sbjct: 30  GKAIHAQMIRAAHFDVIQ-HNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYAS 88

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLIST-LSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            G + +A+    A+ +    S N  ++ST LS+ A +    +G+Q HG  +K GL     
Sbjct: 89  AGRHSDAL----ALLKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPY 144

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V NA+L +Y    ++   +KVF  +   D  ++NS+I  F D       +++    M   
Sbjct: 145 VCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEF-DGSIRIVRSMVGE 203

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
               + V+++ +L   +S     LG QVHAQ +K  +     + +AL+  YGKC    D 
Sbjct: 204 VEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDA 263

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
              F  + E+ + VSW ++++ Y  NE    A+ L   +   G R + FT+A  L++CA 
Sbjct: 264 HSAFEVLPEK-NVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAG 322

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           +A L+ G  + A  ++      + + +AL++MYSK G I  A R F  MP R+V SWNS+
Sbjct: 323 LAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSV 382

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I GYA HG   +A+ +F  M L   +P +VTFVGVL AC+  GLVDEG  +   M +  G
Sbjct: 383 IIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMG 442

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           + P  E ++CMV LL RAG LD+ E+FI    I  + + W+++L +C     +   LG +
Sbjct: 443 IKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSC--QVYKNYGLGHR 500

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
            A  + +++P +   YVLL+NMYA   +W+ V K RK M+E  V+KE G SW+ +   VH
Sbjct: 501 VAEQILQLKPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEVH 560

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
           VF + D++H   + I  KLKEL  +++  GYVP     L D+E E KE+ + YHSEK+A+
Sbjct: 561 VFTSEDKNHKWINQITIKLKELIGQIKVIGYVPNCAVVLHDVEAEQKEEHLMYHSEKMAL 620

Query: 874 AFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
           AF L  + +   IRIMKNLR+C DCH A K IS +  R+IV+RD+ RFH  +DG CSC D
Sbjct: 621 AFGLIHSPEGETIRIMKNLRICDDCHVAIKLISVVTRRKIVVRDTVRFHCIDDGVCSCDD 680

Query: 933 YW 934
           YW
Sbjct: 681 YW 682



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 209/470 (44%), Gaps = 54/470 (11%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G  +H  ++++   FD +  N LIA YG C      AR++F+ + +R+ +S N ++S Y+
Sbjct: 30  GKAIHAQMIRAAH-FDVIQHNHLIAFYGKC-GRLGLARQMFDAMPSRNAVSGNLLMSGYA 87

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
             G       L      +   +SL  NEY   + ++AA      G  + +Q      K+G
Sbjct: 88  SAGRHSDALALL-----KAADFSL--NEYVLSTALSAAAHVRSYG--MGRQCHGYAVKSG 138

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------ 274
           L    YV +A++  + +  +   A K+FE +   ++ + N ++ G               
Sbjct: 139 LQEHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVR 198

Query: 275 -----------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
                                        G +VH   ++  L   V VG+ LV+MY KC 
Sbjct: 199 SMVGEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCD 258

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
              D+ S F  +  K+ VSW  +++   QN  +E+A+  F  +  +G+  + F+    L+
Sbjct: 259 CARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALN 318

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           SCA L  +  G  +    +K G    +SV NAL+++Y+ +G +    +VF  MP  D VS
Sbjct: 319 SCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVS 378

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQ 484
           WNSVI  +A    L  EA+  + DM  A   P+ VTF+ +L A +   +   G + ++  
Sbjct: 379 WNSVIIGYA-HHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIM 437

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           + +  +         ++    + G +D+ E+         D V+W S++S
Sbjct: 438 MKEMGIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLS 487



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 149/570 (26%), Positives = 236/570 (41%), Gaps = 93/570 (16%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q+++    +DV   N LI  Y + G L  A ++FD MP RN+VS   ++SGY   
Sbjct: 31  KAIHAQMIRAAH-FDVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYASA 89

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G  ++A  + K    A F LN Y L + L A       G   G Q H   +KS       
Sbjct: 90  GRHSDALALLKA---ADFSLNEYVLSTALSAAAHVRSYG--MGRQCHGYAVKSGLQEHPY 144

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V N ++ MY  C    D A ++FE +   D+ ++NS+I+ +   G+     ++   M  E
Sbjct: 145 VCNAVLHMYCQCAHVED-AVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGE 203

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
             ++         G    A+   +L G     Q+ A   K  L  ++YVGSALV  + + 
Sbjct: 204 VEQWDHVSYVAVLGH--CASTKELLLGC----QVHAQALKRRLEQNVYVGSALVDMYGKC 257

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLM---------------------EGRR---------- 273
                A   FE + +KNVVS   +M                     EG R          
Sbjct: 258 DCARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVAL 317

Query: 274 ----------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                      G  +    +++G +  ++V N L+NMY+K G+I D+  VF  M  +D V
Sbjct: 318 NSCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVV 377

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SWN++I G   +G   EA+  F  M    ++ S  + +  L +CA LG +        EG
Sbjct: 378 SWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLV-------DEG 430

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           L                      YL+  +K   + P  +   +  ++G    +  L  EA
Sbjct: 431 LY---------------------YLNIMMKEMGIKPGREH--YTCMVGLLCRAGRL-DEA 466

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
            ++ L         + V + ++L++   +    LGH+V  Q+++    N+      L + 
Sbjct: 467 EQFILS---NCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQILQLK-PNDVGTYVLLSNM 522

Query: 504 YGKCGEMDDCEKIFARMSER--RDE--VSW 529
           Y K    D   K+   M ER  R E  VSW
Sbjct: 523 YAKANRWDGVVKVRKLMRERGVRKEPGVSW 552



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 52/99 (52%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K+        +K G    + +CN L+N+Y + G +  A ++F  MP R+ VSW  ++ GY
Sbjct: 327 KNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGY 386

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            H G++ EA  +F +M+ A  + +      VL AC + G
Sbjct: 387 AHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLG 425


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  424 bits (1091), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 225/559 (40%), Positives = 345/559 (61%), Gaps = 8/559 (1%)

Query: 352 GLMSSNFSLISTL-SSCASLGWIMLGQQIHGEGLKLG-LDSDVSVSNALLSLYADAGYLS 409
           G +  +++L S L   C  LG +  G+ +H   +    LD+ + + N ++++YA  G L 
Sbjct: 81  GSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLD 140

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
              ++F  MP  D V+W ++I  F+ +     +A+  +  M R G  PN  T  ++L A+
Sbjct: 141 DARRMFDEMPTKDMVTWTALIAGFSQNNR-PRDALLLFPQMLRLGLQPNHFTLSSLLKAS 199

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
            S      G Q+HA  +KY   +   + +AL+  Y +CG MD  +  F  M  +  EVSW
Sbjct: 200 GSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTK-SEVSW 258

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
           N++ISG+        A++L+W M ++  +  HFT+++V SACAS+  LE+G  VHA  ++
Sbjct: 259 NALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIK 318

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
           + L+    IG+ L+DMY+K G ID A R FD +   +V SWN+M++G A+HG G + L  
Sbjct: 319 SGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDR 378

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           F QM   G  P+ ++F+ VL+ACSH+GL+DEG  +F+ M + Y + P +  +   VDLLG
Sbjct: 379 FEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLG 437

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
           R G LD+ E FI +MPI P + +W  +LGA CR + +  ELG  AA   FE++P ++   
Sbjct: 438 RVGLLDRAERFIREMPIEPTAAVWGALLGA-CRMH-KNMELGVYAAERAFELDPHDSGPR 495

Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIY 829
           +LL+N+YAS G+W DVAK RK MKE+ VKK+  CSWV +++ VH+FVA DE+HP+   I 
Sbjct: 496 MLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIR 555

Query: 830 EKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIM 888
            K +E++ K+++ GYVP T   L  ++ + +E+ + YHSEK+A+AF +L   +  PIRI 
Sbjct: 556 GKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIK 615

Query: 889 KNLRVCGDCHSAFKFISKI 907
           KN+RVCGDCH+A KF+SKI
Sbjct: 616 KNIRVCGDCHAAIKFVSKI 634



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 191/420 (45%), Gaps = 36/420 (8%)

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY--SSVLSGSYLLQQILA-MVK 223
           QRG  +  + L+S++ +E  R      +   G ++ A    S  L    +LQ I+  M  
Sbjct: 79  QRGSLVPDYNLYSKLLKECTRL----GKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYA 134

Query: 224 KAGLLSD------------LYVGSALVSGFARLGNFYYARKIFEQMI----QKNVVSMNG 267
           K G L D            +   +AL++GF++      A  +F QM+    Q N  +++ 
Sbjct: 135 KCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSS 194

Query: 268 LME------GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
           L++      G   G ++H + ++ G    V VG+ LV+MYA+CG +D ++  F  M  K 
Sbjct: 195 LLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKS 254

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            VSWN +ISG  + G  E A+     M+R     ++F+  S  S+CAS+G +  G+ +H 
Sbjct: 255 EVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHA 314

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             +K GL     + N LL +YA AG +    +VF  + + D VSWN+++   A    L  
Sbjct: 315 HMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCA-QHGLGK 373

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           E +  +  M R G  PN ++F+ +L A S   +   G      + KY V  +       +
Sbjct: 374 ETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFV 433

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNELLPKAMNLVWFMMQRGQRLD 560
              G+ G +D  E+    M        W +++    +H     K M L  +  +R   LD
Sbjct: 434 DLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMH-----KNMELGVYAAERAFELD 488



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 173/355 (48%), Gaps = 45/355 (12%)

Query: 2   KDAKLFHLQIL-KHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +  ++ H  ++  H     + L N ++N+Y + G L  A ++FDEMP ++ V+W  +++G
Sbjct: 104 EQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAG 163

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           ++      +A  +F +M+R G   N + L S+L+A       G   G Q+H   LK    
Sbjct: 164 FSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKA--SGSEHGLDPGTQLHAFCLKYGYQ 221

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
               V + L+ MY  C    D A+  F+ + T+  +SWN++IS ++++G+      L  +
Sbjct: 222 SSVYVGSALVDMYARC-GHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWK 280

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           MQR+ F    +P  +T+ S+ +A  S  ++  G +    + A + K+GL    ++G+ L+
Sbjct: 281 MQRKNF----QPTHFTYSSVFSACASIGALEQGKW----VHAHMIKSGLKLIAFIGNTLL 332

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---GKEVHGYLIRSGLFDMVAVGN 295
             +A+ G+   A+++F+++++ +VVS N ++ G  +   GKE                  
Sbjct: 333 DMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKE------------------ 374

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
                     T+D    + R  I  + +S+  +++    +G  +E +  F  M++
Sbjct: 375 ----------TLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK 419



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 143/319 (44%), Gaps = 19/319 (5%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   LK+G+   V++ + L+++Y R G + +A   FD MP ++ VSW  ++SG+  KG 
Sbjct: 211 LHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGE 270

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
              A  +  +M R  F    +   SV  AC   G    + G  VH  ++KS       + 
Sbjct: 271 GEHALHLLWKMQRKNFQPTHFTYSSVFSACASIG--ALEQGKWVHAHMIKSGLKLIAFIG 328

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+ MY     S D A+R+F+ +   D++SWN++++  +Q G        F +M R G 
Sbjct: 329 NTLLDMYAKA-GSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIG- 386

Query: 187 RYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
              ++PNE +F  ++TA   S L   G Y  +    ++KK  +  D+      V    R+
Sbjct: 387 ---IEPNEISFLCVLTACSHSGLLDEGLYYFE----LMKKYKVEPDVPHYVTFVDLLGRV 439

Query: 245 GNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LV 298
           G    A +   +M I+        L+   R  K +  G       F++    +G    L 
Sbjct: 440 GLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLS 499

Query: 299 NMYAKCGTIDDSRSVFRFM 317
           N+YA  G   D   V + M
Sbjct: 500 NIYASAGRWRDVAKVRKMM 518


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  424 bits (1091), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 220/575 (38%), Positives = 339/575 (58%), Gaps = 8/575 (1%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S L SC     I  G+Q+H    ++G+  +  ++  L++LY     L+    +F  + + 
Sbjct: 6   SLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKR 65

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           +   WN +I  +A        A+  Y  MR  G  P+  TF  +L A S+ S  + G ++
Sbjct: 66  NLFLWNVMIRGYA-WNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKI 124

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H  VI+  + ++  +  AL+  Y KCG ++   ++F ++ ER D V WNSM++ Y  N  
Sbjct: 125 HKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDER-DVVCWNSMLATYSQNGQ 183

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +++ L   M   G +    TF   ++A A    L +G E+H    R   E +  + +A
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTA 243

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+DMY+K G ++ A   F+L+  + V SWN+MI+GYA HGH ++AL LF +MK    LPD
Sbjct: 244 LMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMK-GKVLPD 302

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
           H+TFVGVL+ACSH GL++EG  HF+SM   + + P ++ ++CM+DLLG  G L++  + I
Sbjct: 303 HITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLI 362

Query: 722 NKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
            +M + P++ +W  +L +C    N    E+G  A   L E+EP +  NYV+L+NMYA  G
Sbjct: 363 MEMRVEPDAGVWGALLHSCKIHGN---VEMGELALEKLVELEPDDGGNYVILSNMYAQAG 419

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
           KW+ VA+ R  M    +KK   CSW+ + + VH F++ D SHP+ + IY +LK   + M+
Sbjct: 420 KWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMK 479

Query: 841 DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHS 899
           +AGY PQ      D+E + K D+VS HSE++A+AF +++ ++   + I+KNLR+C DCH 
Sbjct: 480 EAGYAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHV 539

Query: 900 AFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           A KFISKI  REI +RD NR+HHF DG CSCGD+W
Sbjct: 540 AIKFISKITEREITIRDVNRYHHFKDGVCSCGDFW 574



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 194/388 (50%), Gaps = 10/388 (2%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK++H  + + G+     +   LVN+Y  C ++ ++  +F  +  ++   WN MI G   
Sbjct: 20  GKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAW 79

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG YE AI  +  MR  GL+   F+    L +C++L  +  G++IH + ++ GL+SDV V
Sbjct: 80  NGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFV 139

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             AL+ +YA  G +    +VF  + E D V WNS++  ++ +     E++     M   G
Sbjct: 140 GAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQN-GQPDESLALCRVMAFNG 198

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             P   TF+  +AA++   +   G ++H    ++   +   ++ AL+  Y K G ++   
Sbjct: 199 LKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVAR 258

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL-DHFTFATVLSACAS 573
            +F  + E+R  VSWN+MI+GY  +    +A++L  F   +G+ L DH TF  VL+AC+ 
Sbjct: 259 SLFELLEEKR-VVSWNAMITGYAMHGHANEALDL--FKEMKGKVLPDHITFVGVLAACSH 315

Query: 574 VATLERG-MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWN 631
              L  G M   +      +   V   + ++D+   CGR++ A +    M V  +   W 
Sbjct: 316 GGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWG 375

Query: 632 SMISGYARHGH---GDKALTLFSQMKLD 656
           +++     HG+   G+ AL    +++ D
Sbjct: 376 ALLHSCKIHGNVEMGELALEKLVELEPD 403



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 161/317 (50%), Gaps = 17/317 (5%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN----------GLMEGRRKGKEVH 279
           +L++ + ++ G+A  G +  A  ++ QM    +V               +    +GK++H
Sbjct: 66  NLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIH 125

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
             +IRSGL   V VG  L++MYAKCG ++ +R VF  +  +D V WN+M++   QNG  +
Sbjct: 126 KDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPD 185

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           E++     M  +GL  +  + + ++++ A  G +  G+++HG   + G +S+  V  AL+
Sbjct: 186 ESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALM 245

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
            +YA +G ++    +F L+ E   VSWN++I  +A      +EA+  + +M +    P+ 
Sbjct: 246 DMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYA-MHGHANEALDLFKEM-KGKVLPDH 303

Query: 460 VTFINILAAASS---FSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           +TF+ +LAA S     + GK+     + +  +N+         ++   G CG +++  K+
Sbjct: 304 ITFVGVLAACSHGGLLNEGKM--HFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKL 361

Query: 517 FARMSERRDEVSWNSMI 533
              M    D   W +++
Sbjct: 362 IMEMRVEPDAGVWGALL 378



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 216/489 (44%), Gaps = 52/489 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H +I + G +++  L   L+N+Y     L +A  LFD +  RN   W  ++ GY
Sbjct: 18  EPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGY 77

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G    A  ++ +M   G + +++    VL+AC     S  + G ++H  V++S    
Sbjct: 78  AWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACS--ALSAMEEGKKIHKDVIRSGLES 135

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V   LI MY  C    + AR++F++I+ RD++ WNS+++ YSQ G       L   M
Sbjct: 136 DVFVGAALIDMYAKC-GCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVM 194

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
              G    LKP E TF   I A+  + L      +++     + G  S+  V +AL+  +
Sbjct: 195 AFNG----LKPTEGTFVISIAASADNGLLPQG--KELHGYSWRHGFESNDKVKTALMDMY 248

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG----- 296
           A+ G+   AR +FE + +K VVS N ++ G      +HG+   +   D+     G     
Sbjct: 249 AKSGSVNVARSLFELLEEKRVVSWNAMITGY----AMHGHANEA--LDLFKEMKGKVLPD 302

Query: 297 ---LVNMYAKC---GTIDDSRSVFRFMIGKDSVSWNT------MISGLDQNGCYEEAIMN 344
               V + A C   G +++ +  FR MI   ++ W T      MI  L   G  EEA   
Sbjct: 303 HITFVGVLAACSHGGLLNEGKMHFRSMISDFNI-WPTVQHYTCMIDLLGHCGRLEEAYKL 361

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
              MR +       +L   L SC   G + +G+    + ++L  D D      L ++YA 
Sbjct: 362 IMEMRVEPDAGVWGAL---LHSCKIHGNVEMGELALEKLVELEPD-DGGNYVILSNMYAQ 417

Query: 405 AGYLSRCLKVFFLM-----PEHDQVSWNSV---IGAF-------ADSEALVSEAVKYYLD 449
           AG      ++  LM      +    SW  V   + AF         SEA+ +E  +    
Sbjct: 418 AGKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKL 477

Query: 450 MRRAGWSPN 458
           M+ AG++P 
Sbjct: 478 MKEAGYAPQ 486



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 95/176 (53%), Gaps = 2/176 (1%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +A++L +C     +E G ++HA   +  + F+ ++ + LV++Y  C  +  A   FD + 
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            RN++ WN MI GYA +G  + A++L+ QM+  G +PD  TF  VL ACS    ++EG K
Sbjct: 64  KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
             K + +  GL   +   + ++D+  + G ++   +  +K+    + + W ++L  
Sbjct: 124 IHKDVIRS-GLESDVFVGAALIDMYAKCGCVESARQVFDKID-ERDVVCWNSMLAT 177


>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 259/798 (32%), Positives = 424/798 (53%), Gaps = 68/798 (8%)

Query: 200 LITAAYSSVLSGS---YLLQQILAMVKKAGLLSDLY---VG---------SALVSGFARL 244
           LI A ++S+   +   +L   ++    K G++ + Y   VG         +A++SGFA+ 
Sbjct: 108 LIKAVHASIFKLAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKS 167

Query: 245 GNFYYARKIFEQM----IQKNVVSMNGLME------GRRKGKEVHGYLIRSGLFDMVAVG 294
                A +IF +M    I+ N  S   ++           G ++H  +I+ G  +   V 
Sbjct: 168 NRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVS 227

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR-DGL 353
           N L+ +Y KCG +D    +F  M  +D  SWNT+IS + +   YE A   F  MRR DG 
Sbjct: 228 NALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGF 287

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR--- 410
              +F+L + L +   L   M+G++IH   +K+G +S++SV NAL+  Y   G +     
Sbjct: 288 RIDHFTLSTILVAARGLA-SMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVA 346

Query: 411 ----------------------------CLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
                                        L+VF  MP  + +S+N+++  F  +    S+
Sbjct: 347 LFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGE-GSK 405

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           A+ ++  M   G      T   +L A       K+  Q+H  ++K+   +   IE ALL 
Sbjct: 406 ALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLD 465

Query: 503 CYGKCGEMDDCEKIFARMSERRDE-VSWNSMISGYIHNELLPKAMNLV-WFMMQRGQRLD 560
              +CG M D +K+F++ S  +   + W SMI GY  N    +A++L     ++    +D
Sbjct: 466 MCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVD 525

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
                 VL  C ++A  E G ++H   +++    D+ +G++++ MYSKC  +D A + F+
Sbjct: 526 KVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFN 585

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH--AGLV 678
           +MP  ++ SWN +I+G+  H  GD+AL+++S+M+  G  PD VTFV ++SA  H  + LV
Sbjct: 586 VMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLV 645

Query: 679 DEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
           D   + F SM  +Y + P +E ++ +V +LG  G L++ EE INKMPI P + +WR +L 
Sbjct: 646 DNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLD 705

Query: 739 ACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVK 798
           AC R +   T +G++AA  L  M+P +   Y+L++N+Y++ G+W      R+ M+    +
Sbjct: 706 AC-RIH-SNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFR 763

Query: 799 KEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPE 858
           K  G SW+  ++ VH F A D+SHP+   I+  L+ L  +   AGYVP T F L ++E  
Sbjct: 764 KHPGRSWIIHENKVHSFYARDKSHPQAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEH 823

Query: 859 SKEDLVSYHSEKIAVAF--VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRD 916
            K+D + YHS KIA  +  ++TR  + PIRI+KN+ +CGDCH+  K++S + GREI LRD
Sbjct: 824 QKKDFLFYHSAKIAATYGLLMTRPGR-PIRIVKNILLCGDCHTFLKYVSIVTGREIFLRD 882

Query: 917 SNRFHHFNDGKCSCGDYW 934
           ++  H F +G+CSC DYW
Sbjct: 883 ASGHHCFLNGQCSCKDYW 900



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 159/574 (27%), Positives = 278/574 (48%), Gaps = 55/574 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  I K   A D+ L N LI  Y+++G + +A K+F  +   N VS+  ++SG+   
Sbjct: 110 KAVHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKS 167

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS---NQTF 121
               +A ++F  M  +G  LN ++  ++L  C        + G Q+H +V+K    N TF
Sbjct: 168 NRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRL--LDLELGCQLHAIVIKMGFLNYTF 225

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              VSN L+ +YG C    D   ++F+E+  RD+ SWN++IS   +       F+LF  M
Sbjct: 226 ---VSNALMGLYGKC-GYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDM 281

Query: 182 QR-EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           +R +GFR     + +T  +++ AA       S + ++I A V K G  S++ V +AL+  
Sbjct: 282 RRIDGFRI----DHFTLSTILVAARGL---ASMVGREIHAHVIKIGFESNISVINALIRF 334

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
           + + G+             K+VV++   M  R                  V     ++  
Sbjct: 335 YTKCGSI------------KHVVALFEKMRVRD-----------------VITWTEMITA 365

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           Y + G  D +  VF  M  ++S+S+N ++SG  QNG   +A+  FC M  +G+  ++F+L
Sbjct: 366 YMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTL 425

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV--FFLM 418
              L++C  L    + +QIHG  LK G  S+  +  ALL +    G ++   K+      
Sbjct: 426 TGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSF 485

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG-WSPNGVTFINILAAASSFSMGKL 477
            +   + W S+I  +A + A   EA+  +   +  G    + V    +L    + +  ++
Sbjct: 486 SQSGSIIWTSMICGYARN-AQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEM 544

Query: 478 GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI 537
           G Q+H   +K    ++  + N++++ Y KC  MDD  K+F  M    D VSWN +I+G++
Sbjct: 545 GKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPA-HDIVSWNGLIAGHL 603

Query: 538 HNELLPKAMNLVWFMMQR-GQRLDHFTFATVLSA 570
            +    +A++ VW  M++ G + D  TF  ++SA
Sbjct: 604 LHRQGDEALS-VWSKMEKAGIKPDTVTFVLIISA 636



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 17/211 (8%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKL--FDEMPDRNSVSWACIV 58
           +K +K  H  ILK GF  +  +   L+++  R G +A A K+          S+ W  ++
Sbjct: 438 AKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMI 497

Query: 59  SGYTHKGMSNEACKMF-KEMVRAGFLLNRYALGSVLRACQECGPSGF-KFGMQVHCLVLK 116
            GY       EA  +F +  +    ++++ A  +VL     CG   F + G Q+HC  LK
Sbjct: 498 CGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGV---CGTLAFHEMGKQIHCHALK 554

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS--VYSQRGDTISV 174
           S    D  V N +I MY  C  + D A ++F  +   D++SWN +I+  +  ++GD    
Sbjct: 555 SGFLSDLGVGNSIITMYSKC-SNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGD--EA 611

Query: 175 FKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
             ++S+M++ G    +KP+  TF  LI +AY
Sbjct: 612 LSVWSKMEKAG----IKPDTVTF-VLIISAY 637


>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
          Length = 1027

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 260/878 (29%), Positives = 445/878 (50%), Gaps = 94/878 (10%)

Query: 8    HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
            H  ++K GF+  VF    L+++Y + GD+ +A ++FD +   +++ W+ +++ Y   G  
Sbjct: 181  HCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCY 240

Query: 68   NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
             EA  +F  M + G   ++  L +++      G                           
Sbjct: 241  QEALALFSRMDKMGSAPDQVTLVTIISTLASSG--------------------------- 273

Query: 128  VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
                         D A  + +++ T   ++WN++IS ++Q G   +V  L+  M+  G  
Sbjct: 274  -----------RLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWG-- 320

Query: 188  YSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
              L P   TF S+++AA +  + + G    QQ+ A     GL ++++VGS+L++ +A+ G
Sbjct: 321  --LWPTRSTFASMLSAAANMKAFVEG----QQMHAAAVMHGLDANVFVGSSLINLYAKCG 374

Query: 246  NFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------- 274
                A+ +F+   +KN+V  N ++ G  +                               
Sbjct: 375  CPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILG 434

Query: 275  ----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                      GK+VH   I++ +   + V N  ++MY+K G I D++++F  +  KDS+S
Sbjct: 435  ACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSIS 494

Query: 325  WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
            WN +  GL QN   EEA+     MR  G+   + S  + +++C+++     G+QIH   +
Sbjct: 495  WNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAI 554

Query: 385  KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
            K G+ S+ +V ++L+ LY+  G +    K+F  +     V  N++I  F  +     EA+
Sbjct: 555  KYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNN-EDEAI 613

Query: 445  KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA-NETTIENALLSC 503
            + +  + + G  P+ VTF +IL+  S      +G QVH   +K  V  ++T +  +L   
Sbjct: 614  QLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGI 673

Query: 504  YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
            Y K   ++D  K+   M + ++   W ++ISGY  N     ++   W M     R D  T
Sbjct: 674  YLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEAT 733

Query: 564  FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR-IDYASRFFDLM 622
            FA+VL AC+ V     G E+H    ++         SAL+DMYSKCG  I     F +L 
Sbjct: 734  FASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELK 793

Query: 623  PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
              +++  WNSMI G+A++G+ D+AL LF +M+     PD VTF+GVL AC+H+GL+ EG 
Sbjct: 794  NKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGR 853

Query: 683  KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
              F  M +VYGL P+L+ ++C +DLLGR G L + +E I+++P  P+ ++W T L A CR
Sbjct: 854  HFFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAA-CR 912

Query: 743  ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
             + +  E G+ AA  L E+EPQ +  YVLL++++A+ G W +    R++M+E  V K  G
Sbjct: 913  MH-KDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPG 971

Query: 803  CSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
            CSW+T+ +   +F+  D+ HP+   IYE L +L   M+
Sbjct: 972  CSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMK 1009



 Score =  297 bits (761), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 215/756 (28%), Positives = 376/756 (49%), Gaps = 46/756 (6%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S+  +  H +IL+ G      L ++L+ +Y + G +  A        +R S + + ++S 
Sbjct: 72  SQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSC 131

Query: 61  YTHKGMSNEACKMFKEM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           +   G   +    F+ +   AG   +++ L  VL AC   G     +G QVHC V+KS  
Sbjct: 132 HARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGV--LAYGRQVHCDVVKSGF 189

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           +        L+ MY  C +  + ARR+F+ I   D I W+S+I+ Y + G       LFS
Sbjct: 190 SSSVFCEAALVDMYAKCGDVPN-ARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFS 248

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           RM + G      P++ T  ++I     S L+ S  L    A++KK    S +   +A++S
Sbjct: 249 RMDKMGS----APDQVTLVTII-----STLASSGRLDHATALLKKMPTPSTV-AWNAVIS 298

Query: 240 GFARLGNFYYARKIFEQMIQ----------KNVVSMNGLMEGRRKGKEVHGYLIRSGLFD 289
           G A+ G  +    +++ M             +++S    M+   +G+++H   +  GL  
Sbjct: 299 GHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDA 358

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
            V VG+ L+N+YAKCG   D+++VF     K+ V WN M++G  QN   EEAI  F  M 
Sbjct: 359 NVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMM 418

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
           R  L +  F+ +S L +C  L    LG+Q+H   +K  +D  + V+NA L +Y+  G + 
Sbjct: 419 RYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIG 478

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
               +F L+P  D +SWN++    A +     EAV     MR  G +P+ V+F   + A 
Sbjct: 479 DAKALFSLIPYKDSISWNALTVGLAQNLE-EEEAVCMLKRMRLHGITPDDVSFSTAINAC 537

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
           S+    + G Q+H   IKY + +   + ++L+  Y K G+++   KIFA++ +    V  
Sbjct: 538 SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQV-DASSIVPI 596

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
           N++I+G++ N    +A+ L   +++ G +    TF+++LS C+       G +VH   ++
Sbjct: 597 NALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLK 656

Query: 590 ACLEF-DVVIGSALVDMYSKCGRIDYASRFFDLMP-VRNVYSWNSMISGYARHGHGDKAL 647
           + + + D ++G +L  +Y K   ++ A++    MP  +N++ W ++ISGYA++G+GD +L
Sbjct: 657 SGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSL 716

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL------EQF 701
             F +M+      D  TF  VL ACS      +G        +++GLI +          
Sbjct: 717 VSFWRMRHCNVRSDEATFASVLKACSDVTAFADG-------KEIHGLITKSGFGSYETAT 769

Query: 702 SCMVDLLGRAGEL----DKIEEFINKMPITP-NSLI 732
           S ++D+  + G++    +  +E  NK  I P NS+I
Sbjct: 770 SALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 805



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 114/257 (44%), Gaps = 13/257 (5%)

Query: 5   KLFHLQILKHGFAYD-VFLCNTLINVYVRVGDLASASKLFDEMPD-RNSVSWACIVSGYT 62
           K  H   LK G  YD   L  +L  +Y++   L  A+KL  EMPD +N   W  I+SGY 
Sbjct: 648 KQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYA 707

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G  + +   F  M       +     SVL+AC +   + F  G ++H L+ KS     
Sbjct: 708 QNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDV--TAFADGKEIHGLITKSGFGSY 765

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
              ++ LI MY  C +         E    +D++ WNS+I  +++ G       LF +M+
Sbjct: 766 ETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKME 825

Query: 183 REGFRYSLKPNEYTF-GSLITAAYSSVLS-GSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
                  +KP+E TF G LI   +S ++S G +       M K  GL   L   +  +  
Sbjct: 826 ----ELQIKPDEVTFLGVLIACTHSGLISEGRHFFG---PMRKVYGLTPRLDHYACFIDL 878

Query: 241 FARLGNFYYARKIFEQM 257
             R G+   A++  +Q+
Sbjct: 879 LGRGGHLQEAQEAIDQL 895



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           ++  K  H   +K+G   +  + ++LI++Y + GD+ S+ K+F ++   + V    +++G
Sbjct: 543 TETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAG 602

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           +      +EA ++F+++++ G   +     S+L  C   G      G QVHC  LKS   
Sbjct: 603 FVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS--GSLNSAIGKQVHCYTLKSGVL 660

Query: 121 FDGLVSNVLIA-MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           +D  +  V +A +Y       D  + + E  + ++L  W +IIS Y+Q G        F 
Sbjct: 661 YDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFW 720

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           RM+      +++ +E TF S++ A   S ++     ++I  ++ K+G  S     SAL+ 
Sbjct: 721 RMR----HCNVRSDEATFASVLKAC--SDVTAFADGKEIHGLITKSGFGSYETATSALID 774

Query: 240 GFARLGNFYYARKIFEQMIQK-NVVSMNGLMEGRRK 274
            +++ G+   + + F+++  K +++  N ++ G  K
Sbjct: 775 MYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAK 810


>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
 gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
          Length = 480

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 217/487 (44%), Positives = 312/487 (64%), Gaps = 9/487 (1%)

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M R G  PN  T+  IL A    S      ++HAQ IK N     ++  ALL  Y K G 
Sbjct: 1   MSREGIKPNDFTYSTILTAQPGVS----PFEMHAQAIKRNYVKSPSVGTALLDAYVKRGN 56

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           +D+  K+F R+ E +D V+W++MI GY        A+ +   M +   + + +TF+ +++
Sbjct: 57  VDEASKVFQRI-EEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIIN 115

Query: 570 ACAS-VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
           ACA+  A +E+G ++HA  +++     + + SAL+ MYSK G I+ A   F     R++ 
Sbjct: 116 ACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLV 175

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           SWNS+ISGYA+HG+G KAL +F +M+      D VTF+GV+SAC+H GL +EG ++F  M
Sbjct: 176 SWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIM 235

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT 748
            + + + P++E +SCMVDL GRAG L K  E IN+MP   ++ +WRT+L A C    R  
Sbjct: 236 VKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIH--RNL 293

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
           E+G+ AA+ L  ++PQN  +YVLL NMYAS G W++ AK RK M+E +VKK AG SW+ +
Sbjct: 294 EVGKLAADKLISLQPQNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKKVAGYSWIEV 353

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
           K+  + F+AGD SHP  + IY KL+EL+ +++ AGY P T +   D++ E KE ++S HS
Sbjct: 354 KNKTYTFLAGDVSHPLSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHS 413

Query: 869 EKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGK 927
           E++A+AF L       P++I+KNLRVCGDCHS  K IS + GR+IV+RDSNRFHHF  G 
Sbjct: 414 ERLAIAFGLIGTPPGTPLQIVKNLRVCGDCHSVIKLISILEGRDIVVRDSNRFHHFKGGL 473

Query: 928 CSCGDYW 934
           CSCGDYW
Sbjct: 474 CSCGDYW 480



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 135/268 (50%), Gaps = 4/268 (1%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           E+H   I+       +VG  L++ Y K G +D++  VF+ +  KD V+W+ MI G  Q G
Sbjct: 27  EMHAQAIKRNYVKSPSVGTALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIG 86

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS-LGWIMLGQQIHGEGLKLGLDSDVSVS 395
             E A+  F  M ++ +  + ++    +++CA+    +  G+Q+H   +K   ++ + VS
Sbjct: 87  DTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVS 146

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           +ALL++Y+  G +    +VF    E D VSWNS+I  +A       +A++ + +M+R   
Sbjct: 147 SALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQ-HGYGRKALEVFEEMQRQNL 205

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCE 514
             +GVTFI +++A +   +   G +    ++K +++       + ++  YG+ G +    
Sbjct: 206 EMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKAM 265

Query: 515 KIFARMSERRDEVSWNSMISGY-IHNEL 541
           +I   M        W ++++   IH  L
Sbjct: 266 EIINEMPFPASANVWRTLLAASCIHRNL 293



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 122/251 (48%), Gaps = 7/251 (2%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H Q +K  +     +   L++ YV+ G++  ASK+F  + +++ V+W+ ++ GY   G 
Sbjct: 28  MHAQAIKRNYVKSPSVGTALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGD 87

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           +  A ++F +M +     N Y    ++ AC     +G + G Q+H   +KS       VS
Sbjct: 88  TEGAVRIFVQMAKEKIKPNEYTFSGIINACA-APTAGVEQGKQLHAWSIKSRFNNALCVS 146

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L+ MY S     + A  +F+    RDL+SWNSIIS Y+Q G      ++F  MQR+  
Sbjct: 147 SALLTMY-SKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQ-- 203

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
             +L+ +  TF  +I+A   + L+     +    MVK   +   +   S +V  + R G 
Sbjct: 204 --NLEMDGVTFIGVISACTHTGLANEG-QRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGM 260

Query: 247 FYYARKIFEQM 257
              A +I  +M
Sbjct: 261 LVKAMEIINEM 271



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 135/276 (48%), Gaps = 41/276 (14%)

Query: 181 MQREGFRYSLKPNEYTFGSLITAA--------YSSVLSGSYLLQQIL------AMVKKAG 226
           M REG    +KPN++T+ +++TA         ++  +  +Y+    +      A VK+  
Sbjct: 1   MSREG----IKPNDFTYSTILTAQPGVSPFEMHAQAIKRNYVKSPSVGTALLDAYVKRGN 56

Query: 227 L-----------LSDLYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLME- 270
           +             D+   SA++ G+A++G+   A +IF QM    I+ N  + +G++  
Sbjct: 57  VDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINA 116

Query: 271 ------GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                 G  +GK++H + I+S   + + V + L+ MY+K G I+ +  VF+    +D VS
Sbjct: 117 CAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVS 176

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           WN++ISG  Q+G   +A+  F  M+R  L     + I  +S+C   G    GQ+     +
Sbjct: 177 WNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMV 236

Query: 385 K-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           K   ++  +   + ++ LY  AG L + +++   MP
Sbjct: 237 KDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMP 272



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H   +K  F   + + + L+ +Y + GD+ SA ++F    +R+ VSW  I+SGY
Sbjct: 125 EQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGY 184

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   +A ++F+EM R    ++      V+ AC   G
Sbjct: 185 AQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTG 223


>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 705

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 226/568 (39%), Positives = 329/568 (57%), Gaps = 13/568 (2%)

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL------MPEHDQVSWNSVIG 431
           QIH   LKLGL  +  V     +  +    +     V F        P HD   +N++I 
Sbjct: 140 QIHSLILKLGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIR 199

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA 491
           AFA +      A+++Y  MRR   SPN  TF  +L A +     +LG  VHA ++K+   
Sbjct: 200 AFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFE 259

Query: 492 NETTIENALLSCYGKCGEMDDCEKIFARM----SERRDEVSWNSMISGYIHNELLPKAMN 547
            +  + N L+  Y  C +      + A+     S  +D V+W++MI GY       +A+ 
Sbjct: 260 EDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGNSARAVT 319

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
           L   M   G   D  T  +VLSACA +  LE G  + +   R  +   V + +AL+DM++
Sbjct: 320 LFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFA 379

Query: 608 KCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVG 667
           KCG +D A + F  M VR + SW SMI G A HG G +A+ +F +M   G  PD V F+G
Sbjct: 380 KCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIG 439

Query: 668 VLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPIT 727
           VLSACSH+GLVD+G  +F +M  ++ ++P++E + CMVD+L RAG +++  EF+  MP+ 
Sbjct: 440 VLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVE 499

Query: 728 PNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
           PN +IWR+++ AC      + +LG   A  L   EP +  NYVLL+N+YA   +WE   K
Sbjct: 500 PNQVIWRSIVTACHARG--ELKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTK 557

Query: 788 ARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQ 847
            R+ M    ++K  G + + M + ++ FVAGD+SH +   IYE ++E+ ++++ AGYVP 
Sbjct: 558 VREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMGREIKRAGYVPT 617

Query: 848 TKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISK 906
           T   L D++ E KED +  HSEK+A+AF +L+     PIRI+KNLRVC DCHSA KFISK
Sbjct: 618 TSQVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPIRIVKNLRVCEDCHSATKFISK 677

Query: 907 IVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +  REIV+RD NRFHHF +G CSCGD+W
Sbjct: 678 VYNREIVVRDRNRFHHFKNGLCSCGDFW 705



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 146/325 (44%), Gaps = 22/325 (6%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN------------GLMEGRRKGKE 277
           D ++ + L+  FA+  +       F   ++++ VS N            G+M     G  
Sbjct: 190 DAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMR-LELGGA 248

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKC------GTIDDSRSVFRFMIGKDSVSWNTMISG 331
           VH  +++ G  +   V N LV+MY  C      G +  ++ VF     KDSV+W+ MI G
Sbjct: 249 VHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVS-AKKVFDESPVKDSVTWSAMIGG 307

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
             + G    A+  F  M+  G+     +++S LS+CA LG + LG+ +     +  +   
Sbjct: 308 YARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRS 367

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           V + NAL+ ++A  G + R +KVF  M     VSW S+I   A       EAV  + +M 
Sbjct: 368 VELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLA-MHGRGLEAVLVFDEMM 426

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEM 510
             G  P+ V FI +L+A S   +   GH     +   +++  +      ++    + G +
Sbjct: 427 EQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRV 486

Query: 511 DDCEKIFARMSERRDEVSWNSMISG 535
           ++  +    M    ++V W S+++ 
Sbjct: 487 NEALEFVRAMPVEPNQVIWRSIVTA 511



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 17/227 (7%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYV-----RVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           H  ++K GF  D  + NTL+++Y            SA K+FDE P ++SV+W+ ++ GY 
Sbjct: 250 HASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYA 309

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G S  A  +F+EM   G   +   + SVL AC + G    + G  +   + + N    
Sbjct: 310 RAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLG--ALELGKWLESYIERKNIMRS 367

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             + N LI M+  C +  D A ++F E++ R ++SW S+I   +  G  +    +F  M 
Sbjct: 368 VELCNALIDMFAKCGD-VDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMM 426

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVL--SGSY---LLQQILAMVKK 224
            +G    + P++  F  +++A   S L   G Y    ++ + ++V K
Sbjct: 427 EQG----VDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPK 469



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 75/355 (21%), Positives = 157/355 (44%), Gaps = 27/355 (7%)

Query: 47  PDRNSVSWACIVSGYTHKGMSN-EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFK 105
           P  ++  +  ++  +     S   A + +  M R     N++    VL+AC   G    +
Sbjct: 187 PSHDAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKAC--AGMMRLE 244

Query: 106 FGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC----ARRIFEEIETRDLISWNSI 161
            G  VH  ++K     D  V N L+ MY  C +        A+++F+E   +D ++W+++
Sbjct: 245 LGGAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAM 304

Query: 162 ISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAM 221
           I  Y++ G++     LF  MQ  G    + P+E T  S+++A     L    L + + + 
Sbjct: 305 IGGYARAGNSARAVTLFREMQVTG----VCPDEITMVSVLSACAD--LGALELGKWLESY 358

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-RRKGKEVHG 280
           +++  ++  + + +AL+  FA+ G+   A K+F +M  + +VS   ++ G    G+ +  
Sbjct: 359 IERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEA 418

Query: 281 YLIRSGLFDMVAVGN-----GLVNMYAKCGTIDDSRSVFRFMIGKDSV-----SWNTMIS 330
            L+   + +     +     G+++  +  G +D     F  M    S+      +  M+ 
Sbjct: 419 VLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVD 478

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
            L + G   EA+    AM    +  +     S +++C + G + LG+ +  E ++
Sbjct: 479 MLSRAGRVNEALEFVRAM---PVEPNQVIWRSIVTACHARGELKLGESVAKELIR 530



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 29/201 (14%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           V LCN LI+++ + GD+  A K+F EM  R  VSW  ++ G    G   EA  +F EM+ 
Sbjct: 368 VELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMME 427

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN---QTFDGLVSNVL-IAMYGS 135
            G   +  A   VL AC   G            LV K +    T + + S V  I  YG 
Sbjct: 428 QGVDPDDVAFIGVLSACSHSG------------LVDKGHYYFNTMENMFSIVPKIEHYGC 475

Query: 136 CLESTDCARRIFEEIE-------TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRY 188
            ++    A R+ E +E         + + W SI++    RG+     KL   + +E  R 
Sbjct: 476 MVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGE----LKLGESVAKELIRR 531

Query: 189 SLKPNEYTFGSLITAAYSSVL 209
             +P+  +   L++  Y+ +L
Sbjct: 532 --EPSHESNYVLLSNIYAKLL 550


>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
 gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/605 (36%), Positives = 346/605 (57%), Gaps = 37/605 (6%)

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           +S L SC +L  + +   IH   ++     DV  ++ L+S+  +   L    +VF+ +  
Sbjct: 19  LSFLESCTTLSHLKI---IHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQN 75

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            +   +NS I  F+ S+    ++  +Y+  +R G  P+ +T+  ++ A +      +G Q
Sbjct: 76  PNLFIYNSFIRGFSGSKD-PDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQ 134

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS------------------- 521
            H Q+I++   ++  ++N+L++ Y   G++     +F R+S                   
Sbjct: 135 AHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGD 194

Query: 522 -----------ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
                        ++ V+W+ MISGY  N    KA+ L + +   G   +     +V+++
Sbjct: 195 VTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIAS 254

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
           CA +  LE G   H   +R  +  ++++G+ALVDMY++CG ID A   FD +P R+  SW
Sbjct: 255 CAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSW 314

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
            ++I+G+A HG+ +KAL  FS+M+  G  P  +TF  VLSACSH GLV+ G + F+SM +
Sbjct: 315 TTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKR 374

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
            Y + P+LE + CMVDLLGRAG+L + E+F+N+MP+ PN+ IW  +LGA CR + + +E+
Sbjct: 375 DYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGA-CRIH-KNSEI 432

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
             +A   L E++P+++  YVLL+N+YA   KWE+V   R+ MKE  V K  G +   M  
Sbjct: 433 AERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDG 492

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
            VH F  GD++HPE   I    +E+  K+R AGY      ALFD++ E KE  +  HSEK
Sbjct: 493 KVHKFTIGDKTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFDIDEEEKESNIHRHSEK 552

Query: 871 IAVAFVLTRNS-KLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +A+A+ + R     PIRI+KNLRVC DCH+A K ISK+  RE+++RD NRFHHF  G CS
Sbjct: 553 LAIAYAIMRTKGHDPIRIVKNLRVCEDCHTATKLISKVYERELIVRDRNRFHHFKGGACS 612

Query: 930 CGDYW 934
           C DYW
Sbjct: 613 CMDYW 617



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/427 (24%), Positives = 209/427 (48%), Gaps = 42/427 (9%)

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
           +H  +++++  FD   ++ LI++        D A ++F +I+  +L  +NS I  +S   
Sbjct: 34  IHAHLIRAHTIFDVFAASCLISI-SINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSK 92

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ-QILAMVKKAGLL 228
           D    F  + + +R G    L P+  T+  L+ A       GS  +  Q    + + G  
Sbjct: 93  DPDKSFHFYVQSKRNG----LVPDNLTYPFLVKACTQK---GSLDMGIQAHGQIIRHGFD 145

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLF 288
           SD+YV ++LV+ ++ LG+   A  +F ++   +VVS   ++ G                 
Sbjct: 146 SDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAG----------------- 188

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
                       Y K G +  +R +F  M  K+ V+W+ MISG  +N  +++AI  +  +
Sbjct: 189 ------------YIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLL 236

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           + +G+ ++   ++S ++SCA LG + LG++ H   L+  +  ++ +  AL+ +YA  G +
Sbjct: 237 QSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSI 296

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
            + + VF  +P  D +SW ++I  FA       +A++Y+  M +AG +P  +TF  +L+A
Sbjct: 297 DKAIWVFDQLPGRDALSWTTLIAGFA-MHGYAEKALEYFSRMEKAGLTPREITFTAVLSA 355

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDE 526
            S   + + G ++  + +K +   E  +E+   ++   G+ G++ + EK    M  + + 
Sbjct: 356 CSHGGLVERGLELF-ESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNA 414

Query: 527 VSWNSMI 533
             W +++
Sbjct: 415 PIWGALL 421



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/405 (23%), Positives = 194/405 (47%), Gaps = 37/405 (9%)

Query: 276 KEVHGYLIRS-GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           K +H +LIR+  +FD+ A  + L+++      +D +  VF  +   +   +N+ I G   
Sbjct: 32  KIIHAHLIRAHTIFDVFA-ASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSG 90

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +   +++   +   +R+GL+  N +    + +C   G + +G Q HG+ ++ G DSDV V
Sbjct: 91  SKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYV 150

Query: 395 SNALLSLYADAG------YLSR---CL----------------------KVFFLMPEHDQ 423
            N+L+++Y+  G      Y+ R   CL                      K+F  MPE + 
Sbjct: 151 QNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNL 210

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           V+W+ +I  +A + +   +A++ Y  ++  G   N    ++++A+ +     +LG + H 
Sbjct: 211 VTWSVMISGYAKN-SFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHD 269

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
            +++  +     +  AL+  Y +CG +D    +F ++   RD +SW ++I+G+  +    
Sbjct: 270 YILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPG-RDALSWTTLIAGFAMHGYAE 328

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC-LEFDVVIGSAL 602
           KA+     M + G      TF  VLSAC+    +ERG+E+     R   +E  +     +
Sbjct: 329 KALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCM 388

Query: 603 VDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKA 646
           VD+  + G++  A +F + MP++ N   W +++     H + + A
Sbjct: 389 VDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIA 433



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 101/432 (23%), Positives = 197/432 (45%), Gaps = 44/432 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K+ H  +++    +DVF  + LI++ +    L  A+++F ++ + N   +   + G++  
Sbjct: 32  KIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGS 91

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
              +++   + +  R G + +      +++AC + G      G+Q H  +++     D  
Sbjct: 92  KDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKG--SLDMGIQAHGQIIRHGFDSDVY 149

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V N L+ MY S L     A  +F  I   D++SW S+++ Y + GD  S  KLF +M  +
Sbjct: 150 VQNSLVTMY-STLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEK 208

Query: 185 GF-RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
               +S+  + Y   S    A            ++  +++  G+ ++  V  ++++  A 
Sbjct: 209 NLVTWSVMISGYAKNSFFDKAI-----------ELYFLLQSEGVHANETVMVSVIASCAH 257

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
           LG                      L  G R     H Y++R+ +   + +G  LV+MYA+
Sbjct: 258 LG---------------------ALELGER----AHDYILRNKMTVNLILGTALVDMYAR 292

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           CG+ID +  VF  + G+D++SW T+I+G   +G  E+A+  F  M + GL     +  + 
Sbjct: 293 CGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAV 352

Query: 364 LSSCASLGWIMLGQQIHGEGLKLG--LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           LS+C+  G +  G ++  E +K    ++  +     ++ L   AG L+   K    MP  
Sbjct: 353 LSACSHGGLVERGLELF-ESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMK 411

Query: 422 DQVS-WNSVIGA 432
                W +++GA
Sbjct: 412 PNAPIWGALLGA 423


>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 693

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 216/547 (39%), Positives = 329/547 (60%), Gaps = 4/547 (0%)

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           + DV   N +++ YA+ G L     +F  MPE D  SW +++  +   +      V Y L
Sbjct: 150 ERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSL 209

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
             R     PN  T  + +AAA++    + G ++H  +++  + ++  + ++L+  YGKCG
Sbjct: 210 MQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCG 269

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
            +D+   IF ++ ++ D VSW SMI  Y  +    +  +L   ++   +R + +TF+ VL
Sbjct: 270 CIDEARNIFDKIIDK-DVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVL 328

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
           +ACA + T E G +VH    R   +      S+L+DMY+KCG I+ A    D  P  ++ 
Sbjct: 329 NACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLV 388

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           S  S+I GYA++G  D+AL  F  +   G  PDHVTFV VLSAC+HAGLV++G + F S+
Sbjct: 389 SLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSI 448

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT 748
           ++ + L    + ++C+VDLL R+G  ++++  +++MP+ P+  +W +VLG C  +     
Sbjct: 449 TEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGC--STYGNI 506

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
           +L  +AA  LF++EP+N V YV +AN+YA+ GKWE+  K RK M+E  + K+ G SW  +
Sbjct: 507 DLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGSSWTEI 566

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
           K   HVF+A D SHP  + I E L EL +KM++ GYVP T   L D+E E KE+ + YHS
Sbjct: 567 KRKRHVFIAADTSHPMYNQIIEFLGELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHS 626

Query: 869 EKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGK 927
           EK+AVAF +L+      I++ KNLR C DCHSA KFISKI  R+I +RDS RFH F +G+
Sbjct: 627 EKLAVAFAILSTEEGTAIKVFKNLRSCVDCHSAIKFISKITKRKITIRDSTRFHCFENGQ 686

Query: 928 CSCGDYW 934
           CSC DYW
Sbjct: 687 CSCRDYW 693



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 140/550 (25%), Positives = 249/550 (45%), Gaps = 62/550 (11%)

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA----- 250
           TF  LI    S++LS SY  Q+  +   K    S L  G  +V    R   F  A     
Sbjct: 12  TFHGLIFK--SNLLSSSYASQKRFS--DKKFFDSKLEDGGVVVERLCRANRFGEAIDVLC 67

Query: 251 -RKIFEQMIQK-------------NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
            +K+  + +Q              N++ +        +GK+VH ++  SG    + + N 
Sbjct: 68  GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 127

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY------------------ 338
           ++ MYAKCG++ D+R VF  M  +D  SWN M++G  + G                    
Sbjct: 128 ILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSW 187

Query: 339 -------------EEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGL 384
                        EEA++ +  M+R      N F++ S +++ A++  I  G++IHG  +
Sbjct: 188 TAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIV 247

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           + GLDSD  + ++L+ +Y   G +     +F  + + D VSW S+I  +  S     E  
Sbjct: 248 RAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRW-REGF 306

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
             + ++  +   PN  TF  +L A +  +  +LG QVH  + +      +   ++L+  Y
Sbjct: 307 SLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMY 366

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            KCG ++    +      + D VS  S+I GY  N    +A+     +++ G + DH TF
Sbjct: 367 TKCGNIESARHV-VDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTF 425

Query: 565 ATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
             VLSAC     +E+G+E  ++   +  L       + LVD+ ++ GR +        MP
Sbjct: 426 VNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMP 485

Query: 624 VR-NVYSWNSMISGYARHGHGDKALTLFSQM-KLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           ++ + + W S++ G + +G+ D A     ++ K++   P  VT+V + +  + AG  +E 
Sbjct: 486 MKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENP--VTYVTMANIYAAAGKWEEE 543

Query: 682 FKHFKSMSQV 691
            K  K M ++
Sbjct: 544 GKMRKRMQEI 553



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/448 (23%), Positives = 215/448 (47%), Gaps = 37/448 (8%)

Query: 143 ARRIFEEIETRDLIS----WNSIISVYSQRGDTISVFKLFSRM-QREGFRYSLKPNEYTF 197
            +++ E I T   +     WN I+ +Y++ G  +   K+F  M +R+   +++  N Y  
Sbjct: 106 GKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAE 165

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
             L+  A +       L  ++           D Y  +A+V+G+ +      A  ++  M
Sbjct: 166 VGLLEEARN-------LFDEMPE--------RDSYSWTAMVTGYVKKDQPEEALVLYSLM 210

Query: 258 -----IQKNVVSMNGL------MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
                 + N+ +++        ++  R+GKE+HG+++R+GL     + + L++MY KCG 
Sbjct: 211 QRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGC 270

Query: 307 IDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
           ID++R++F  +I KD VSW +MI    ++  + E    F  +       + ++    L++
Sbjct: 271 IDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNA 330

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSW 426
           CA L    LG+Q+HG   ++G D     S++L+ +Y   G +     V    P+ D VS 
Sbjct: 331 CADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSL 390

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
            S+IG +A +     EA+KY+  + ++G  P+ VTF+N+L+A +   + + G +    + 
Sbjct: 391 TSLIGGYAQN-GKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSIT 449

Query: 487 -KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG---YIHNELL 542
            K+++ + +     L+    + G  +  + + + M  +  +  W S++ G   Y + +L 
Sbjct: 450 EKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLA 509

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSA 570
            +A   + F ++    + + T A + +A
Sbjct: 510 EEAAQEL-FKIEPENPVTYVTMANIYAA 536



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 199/450 (44%), Gaps = 60/450 (13%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ K  H  I   GF   + + N ++ +Y + G L  A K+FDEMP+R+  SW  +V+GY
Sbjct: 104 EEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGY 163

Query: 62  THKGMSNEACKMFKEM---------------VRAGFLLNRYALGSVLRACQECGPSGF-- 104
              G+  EA  +F EM               V+         L S+++      P+ F  
Sbjct: 164 AEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTV 223

Query: 105 -------------KFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE 151
                        + G ++H  ++++    D ++ + L+ MYG C    D AR IF++I 
Sbjct: 224 SSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC-GCIDEARNIFDKII 282

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
            +D++SW S+I  Y +       F LFS +     R    PNEYTF  ++ A   + L+ 
Sbjct: 283 DKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCER----PNEYTFSGVLNAC--ADLTT 336

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             L +Q+   + + G     +  S+L+  + + GN   AR + +   + ++VS+  L+ G
Sbjct: 337 EELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGG 396

Query: 272 ---RRKGKEVHGY---LIRSGL-FDMVAVGNGLVNMYAKC---GTIDDSRSVFRFMIGKD 321
                K  E   Y   L++SG   D V      VN+ + C   G ++     F  +  K 
Sbjct: 397 YAQNGKPDEALKYFDLLLKSGTKPDHVT----FVNVLSACTHAGLVEKGLEFFYSITEKH 452

Query: 322 SVS-----WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
            ++     +  ++  L ++G +E+       M    +  S F   S L  C++ G I L 
Sbjct: 453 DLTHTSDHYTCLVDLLARSGRFEQLKSVLSEM---PMKPSKFLWASVLGGCSTYGNIDLA 509

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
           ++   E  K+  ++ V+    + ++YA AG
Sbjct: 510 EEAAQELFKIEPENPVTYV-TMANIYAAAG 538



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 184/440 (41%), Gaps = 79/440 (17%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G +VH  +  S      ++ N ++ MY  C    D AR++F+E+  RD+ SWN +++ Y+
Sbjct: 106 GKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVD-ARKVFDEMPERDVCSWNVMVNGYA 164

Query: 167 QRGDTISVFKLFSRM-QREGFRYSL---------KPNE----YTFGSLITAAYSSVLSGS 212
           + G       LF  M +R+ + ++          +P E    Y+    +  +  ++ + S
Sbjct: 165 EVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVS 224

Query: 213 YLL------------QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
             +            ++I   + +AGL SD  + S+L+  + + G    AR IF+++I K
Sbjct: 225 SAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDK 284

Query: 261 NVVSMNGLMEGRRK-----------------------------------------GKEVH 279
           +VVS   +++   K                                         G++VH
Sbjct: 285 DVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVH 344

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
           GY+ R G        + L++MY KCG I+ +R V       D VS  ++I G  QNG  +
Sbjct: 345 GYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPD 404

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IHGEGLKLGLDSDVSVSNAL 398
           EA+  F  + + G    + + ++ LS+C   G +  G +  +    K  L         L
Sbjct: 405 EALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCL 464

Query: 399 LSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFAD--SEALVSEAVKYYLDMRRAGW 455
           + L A +G   +   V   MP +  +  W SV+G  +   +  L  EA +    +     
Sbjct: 465 VDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE---- 520

Query: 456 SPNGVTFI---NILAAASSF 472
             N VT++   NI AAA  +
Sbjct: 521 PENPVTYVTMANIYAAAGKW 540



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 113/252 (44%), Gaps = 22/252 (8%)

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
            +LL +A+ L    + R ++    T+  ++  C+    LE G +VH     +     +VI
Sbjct: 69  QKLLREAVQL----LGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVI 124

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            + ++ MY+KCG +  A + FD MP R+V SWN M++GYA  G  ++A  LF +M    P
Sbjct: 125 WNRILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEM----P 180

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL------EQFSCMVDLLGRAG 712
             D  ++  +++        +E    +  M +V    P +         +  +  + R  
Sbjct: 181 ERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGK 240

Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLL 772
           E   I   I +  +  + ++W +++    +  C       +A N+  ++  ++ V++  +
Sbjct: 241 E---IHGHIVRAGLDSDEVLWSSLMDMYGKCGCID-----EARNIFDKIIDKDVVSWTSM 292

Query: 773 ANMYASGGKWED 784
            + Y    +W +
Sbjct: 293 IDRYFKSSRWRE 304


>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 239/685 (34%), Positives = 372/685 (54%), Gaps = 75/685 (10%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           + K+VH ++++ G    V V N L+N ++ C  + D+  VF      DSVSWN++++G  
Sbjct: 231 EAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYI 290

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           + G  EEA   +  M    +++SN                                    
Sbjct: 291 EIGNVEEAKHIYHQMPERSIIASN------------------------------------ 314

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
              +++ L+   G +    K+F  M E D V+W+++I  F  +E +  EA++ ++ M + 
Sbjct: 315 ---SMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNE-MYEEAIRTFVGMHKI 370

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM--- 510
           G   + V  ++ L+A ++  +  +G  +H+  +K    +   ++NAL+  Y KCG++   
Sbjct: 371 GVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVA 430

Query: 511 ----------------------------DDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
                                       D+ + IF  M E+ D VSW+SMISGY  N+L 
Sbjct: 431 RKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEK-DVVSWSSMISGYAQNDLF 489

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
            + + L   M   G + D  T  +V+SACA +A LE+G  VHA   R  L  +V++G+ L
Sbjct: 490 DETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTL 549

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           +DMY KCG ++ A   F  M  + + +WN++I G A +G  + +L +FS MK     P+ 
Sbjct: 550 IDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNE 609

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFIN 722
           +TF+GVL AC H GLVDEG  HF SM   + + P ++ + CMVDLLGRAG+L + EE +N
Sbjct: 610 ITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLN 669

Query: 723 KMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKW 782
           +MP+TP+   W  +LGAC +     +E+GR+    L E++P +   +VLL+N+YAS GKW
Sbjct: 670 RMPMTPDVATWGALLGACKKHG--DSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKW 727

Query: 783 EDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDA 842
           +DV + R  M +  V K  GCS +     +H F+AGD++HP+ D I + L E+  K++  
Sbjct: 728 DDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLE 787

Query: 843 GYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAF 901
           GY P     L D++ E KE  +  HSEK+A+AF ++  +   PIRIMKNLR+C DCH+A 
Sbjct: 788 GYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAA 847

Query: 902 KFISKIVGREIVLRDSNRFHHFNDG 926
           K ISK   R+IV+RD +RFHHF  G
Sbjct: 848 KLISKAFCRKIVVRDRHRFHHFEQG 872



 Score =  172 bits (436), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 125/532 (23%), Positives = 241/532 (45%), Gaps = 79/532 (14%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           +AK  H  +LK GF  DV++ NTLIN +    ++  A ++F+E    +SVSW  I++GY 
Sbjct: 231 EAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYI 290

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G   EA  ++ +M                                    ++ SN    
Sbjct: 291 EIGNVEEAKHIYHQMPERS--------------------------------IIASNSMI- 317

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
                VL  M G  +E    A ++F+E+  +D+++W+++I+ + Q        + F  M 
Sbjct: 318 -----VLFGMRGLVVE----ACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMH 368

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           + G       +E    S ++A  + ++     L   L++  K G  S + + +AL+  ++
Sbjct: 369 KIGVMV----DEVVAVSALSACANLLVVNMGKLIHSLSL--KIGTESYINLQNALIYMYS 422

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
           + G+   ARK+F++    +++S N ++ G                             Y 
Sbjct: 423 KCGDIMVARKLFDEAYLLDLISWNSMISG-----------------------------YL 453

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIS 362
           KC  +D+++++F  M  KD VSW++MISG  QN  ++E +  F  M+  G      +L+S
Sbjct: 454 KCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVS 513

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
            +S+CA L  +  G+ +H    + GL  +V +   L+ +Y   G +   L+VF+ M E  
Sbjct: 514 VISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKG 573

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQV 481
             +WN++I   A    LV  ++  + +M++   +PN +TF+ +L A     +   G H  
Sbjct: 574 ISTWNALILGLA-MNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHF 632

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           ++ +  + +         ++   G+ G++ + E++  RM    D  +W +++
Sbjct: 633 YSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALL 684



 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 136/549 (24%), Positives = 252/549 (45%), Gaps = 61/549 (11%)

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
           Y Q       F L+  M        L  + YT+  LI A   S+    +  +Q+   V K
Sbjct: 188 YIQTNSPHFAFTLYKSM----LSNYLGADNYTYPLLIQAC--SIRRSEWEAKQVHNHVLK 241

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------RKGKEV 278
            G  SD+YV + L++ F+   N   A ++F +    + VS N ++ G        + K +
Sbjct: 242 LGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHI 301

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           +  +    +       N ++ ++   G + ++  +F  M+ KD V+W+ +I+   QN  Y
Sbjct: 302 YHQMPERSII----ASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMY 357

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           EEAI  F  M + G+M      +S LS+CA+L  + +G+ IH   LK+G +S +++ NAL
Sbjct: 358 EEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNAL 417

Query: 399 LSLYAD--------------------------AGYLSRCL-----KVFFLMPEHDQVSWN 427
           + +Y+                           +GYL   L      +F  MPE D VSW+
Sbjct: 418 IYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWS 477

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           S+I  +A ++ L  E +  + +M+ +G+ P+  T +++++A +  +  + G  VHA + +
Sbjct: 478 SMISGYAQND-LFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKR 536

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
             +     +   L+  Y KCG ++   ++F  M E+    +WN++I G   N L+  +++
Sbjct: 537 NGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGIS-TWNALILGLAMNGLVESSLD 595

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGME-----VHACGVRACLEFDVVIGSAL 602
           +   M +     +  TF  VL AC  +  ++ G       +H   ++     +V     +
Sbjct: 596 MFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQP----NVKHYGCM 651

Query: 603 VDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           VD+  + G++  A    + MP+  +V +W +++    +  HGD  +      KL    PD
Sbjct: 652 VDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKK--HGDSEMGRRVGRKLIELQPD 709

Query: 662 HVTFVGVLS 670
           H  F  +LS
Sbjct: 710 HDGFHVLLS 718



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 118/500 (23%), Positives = 209/500 (41%), Gaps = 78/500 (15%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           +   N++I ++   G +  A KLFDEM +++ V+W+ +++ +    M  EA + F  M +
Sbjct: 310 IIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHK 369

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC--- 136
            G +++     S L AC          G  +H L LK        + N LI MY  C   
Sbjct: 370 IGVMVDEVVAVSALSACANL--LVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDI 427

Query: 137 ---------------------------LESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
                                          D A+ IF+ +  +D++SW+S+IS Y+Q  
Sbjct: 428 MVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQND 487

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLS 229
                  LF  MQ  GF    KP+E T  S+I+A   + L+     + + A +K+ GL  
Sbjct: 488 LFDETLALFQEMQMSGF----KPDETTLVSVISAC--ARLAALEQGKWVHAYIKRNGLTI 541

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYL-IRSGLF 288
           ++ +G+ L+  + + G    A ++F  MI+K + + N L+ G      V   L + S + 
Sbjct: 542 NVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMK 601

Query: 289 DMVAVGN-----GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT-----MISGLDQNGCY 338
                 N     G++      G +D+ +  F  MI    +  N      M+  L + G  
Sbjct: 602 KCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKL 661

Query: 339 EEA--IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD---VS 393
           +EA  ++N   M  D          + L +C   G   +G+++  + ++L  D D   V 
Sbjct: 662 QEAEELLNRMPMTPDVATWG-----ALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVL 716

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEH--------DQVSWNSVIGAF-------ADSEA 438
           +SN    +YA  G     L++  +M +H          +  N VI  F        D +A
Sbjct: 717 LSN----IYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDA 772

Query: 439 LVSEAVKYYLDMRRAGWSPN 458
           +    V+  + ++  G++P+
Sbjct: 773 IEDMLVEMAMKLKLEGYTPD 792



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 152/339 (44%), Gaps = 19/339 (5%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           ++    +  D+   N++I+ Y++   + +A  +FD MP+++ VSW+ ++SGY    + +E
Sbjct: 432 KLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDE 491

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
              +F+EM  +GF  +   L SV+ AC     +  + G  VH  + ++  T + ++   L
Sbjct: 492 TLALFQEMQMSGFKPDETTLVSVISACARL--AALEQGKWVHAYIKRNGLTINVILGTTL 549

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           I MY  C    + A  +F  +  + + +WN++I   +  G   S   +FS M+    +  
Sbjct: 550 IDMYMKC-GCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMK----KCH 604

Query: 190 LKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           + PNE TF  ++ A     L   G +      +M+    +  ++     +V    R G  
Sbjct: 605 VTPNEITFMGVLGACRHMGLVDEGQH---HFYSMIHDHKIQPNVKHYGCMVDLLGRAGKL 661

Query: 248 YYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMY 301
             A ++  +M     V+  G + G  ++ G    G  +   L ++    +G    L N+Y
Sbjct: 662 QEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIY 721

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
           A  G  DD   + R M+ K  V      S ++ NG   E
Sbjct: 722 ASKGKWDDVLEI-RGMMTKHRVLKIPGCSMIEANGVIHE 759



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 140/312 (44%), Gaps = 42/312 (13%)

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           D++T+  ++ AC+   +     +VH   ++   + DV + + L++ +S C  +  A R F
Sbjct: 212 DNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVF 271

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           +   V +  SWNS+++GY   G+ ++A  ++ QM    P    +    ++      GLV 
Sbjct: 272 NESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM----PERSIIASNSMIVLFGMRGLVV 327

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL--DKIEEFI--NKMPITPNSLIWRT 735
           E  K F  M     L   +  +S ++    +  E+  + I  F+  +K+ +  + ++  +
Sbjct: 328 EACKLFDEM-----LEKDMVTWSALIACF-QQNEMYEEAIRTFVGMHKIGVMVDEVVAVS 381

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV-LLANMYASGGKWEDVAKARKAMKE 794
            L AC  AN     +G+   ++  ++  ++ +N    L  MY+  G   D+  ARK   E
Sbjct: 382 ALSAC--ANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCG---DIMVARKLFDE 436

Query: 795 AEVKKEAGCSWVTMKDG------VHVFVAGDESHPEKDLI--------------YEKLKE 834
           A +      SW +M  G      V    A  +S PEKD++              +++   
Sbjct: 437 AYLLDL--ISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLA 494

Query: 835 LNQKMRDAGYVP 846
           L Q+M+ +G+ P
Sbjct: 495 LFQEMQMSGFKP 506



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 13/209 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  I ++G   +V L  TLI++Y++ G + +A ++F  M ++   +W  ++ G 
Sbjct: 525 EQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGL 584

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG---PSGFKFGMQVHCLVLKSN 118
              G+   +  MF  M +     N      VL AC+  G        F   +H   ++ N
Sbjct: 585 AMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPN 644

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
               G + + L+   G   E+ +   R+     T D+ +W +++    + GD+    ++ 
Sbjct: 645 VKHYGCMVD-LLGRAGKLQEAEELLNRM---PMTPDVATWGALLGACKKHGDS----EMG 696

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSS 207
            R+ R+     L+P+   F  L++  Y+S
Sbjct: 697 RRVGRKLIE--LQPDHDGFHVLLSNIYAS 723


>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
          Length = 513

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 212/519 (40%), Positives = 336/519 (64%), Gaps = 8/519 (1%)

Query: 418 MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
           M   D  SW S+I  +A ++ +  EA+   L M R  + PNG TF ++L AA + +   +
Sbjct: 1   MSTRDMCSWTSLIAGYAQND-MPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGI 59

Query: 478 GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI 537
           G Q+HA  +KY+  ++  + +ALL  Y +CG MD    +F ++ E ++ VSWN++I+G+ 
Sbjct: 60  GEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQL-ESKNGVSWNALIAGFA 118

Query: 538 HNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
                   + +   M + G    HFT+++V SA A +  LE+G  VHA  +++       
Sbjct: 119 RKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAF 178

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           +G+ ++DMY+K G +  A + FD +  +++ +WNSM++ +A++G G +A+T F +M+  G
Sbjct: 179 VGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCG 238

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
              + +TF+ +L+ACSH GLV EG ++F  M + + L P+++ +  +VDLLGRAG L+  
Sbjct: 239 VHLNQITFLSILTACSHGGLVKEGKQYFDMMKE-HNLEPEIDHYVTVVDLLGRAGLLNDA 297

Query: 718 EEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYA 777
             FI KMP+ P + +W  +LG+C R + +  ++G+ AA+ +FE++P +    VLL N+YA
Sbjct: 298 LVFIFKMPMKPTAAVWGALLGSC-RMH-KNAKIGQFAADHVFELDPDDTGPPVLLYNIYA 355

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
           S G+W+  A+ RK MK   VKKE  CSWV +++ VH+FVA D++HP  + IY+K +E++ 
Sbjct: 356 STGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISI 415

Query: 838 KMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKL--PIRIMKNLRVCG 895
           ++R AGYVP T + L  ++ + ++  + YHSEKIA+AF L  N  L   IRIMKN+R+CG
Sbjct: 416 QIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALI-NMPLGATIRIMKNIRICG 474

Query: 896 DCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           DCHSAF++ISK+  REIV+RD+NRFHHF+ G CSCGDYW
Sbjct: 475 DCHSAFRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 140/259 (54%), Gaps = 1/259 (0%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+++H   ++    D V VG+ L++MYA+CG +D + +VF  +  K+ VSWN +I+G  +
Sbjct: 60  GEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFAR 119

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G  E  ++ F  M+R+G  +++F+  S  S+ A +G +  G+ +H   +K G      V
Sbjct: 120 KGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFV 179

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
            N +L +YA +G +    KVF  + + D V+WNS++ AFA    L  EAV ++ +MR+ G
Sbjct: 180 GNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQY-GLGREAVTHFEEMRKCG 238

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
              N +TF++IL A S   + K G Q    + ++N+  E      ++   G+ G ++D  
Sbjct: 239 VHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDAL 298

Query: 515 KIFARMSERRDEVSWNSMI 533
               +M  +     W +++
Sbjct: 299 VFIFKMPMKPTAAVWGALL 317



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 156/325 (48%), Gaps = 48/325 (14%)

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
           + TRD+ SW S+I+ Y+Q         L   M R  F    KPN +TF SL+ AA +S  
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRF----KPNGFTFASLLKAAGASAS 56

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
           SG  + +QI A+  K     D+YVGSAL+  +AR G    A  +F+Q+  KN VS N L+
Sbjct: 57  SG--IGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALI 114

Query: 270 EG-----------------------------------------RRKGKEVHGYLIRSGLF 288
            G                                           +GK VH ++I+SG  
Sbjct: 115 AGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGER 174

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
               VGN +++MYAK G++ D+R VF  +  KD V+WN+M++   Q G   EA+ +F  M
Sbjct: 175 LSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEM 234

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           R+ G+  +  + +S L++C+  G +  G+Q      +  L+ ++     ++ L   AG L
Sbjct: 235 RKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLL 294

Query: 409 SRCLKVFFLMPEHDQVS-WNSVIGA 432
           +  L   F MP     + W +++G+
Sbjct: 295 NDALVFIFKMPMKPTAAVWGALLGS 319



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 156/328 (47%), Gaps = 9/328 (2%)

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M  +D  SW ++I+G  QN   +EA+     M R     + F+  S L +  +     +G
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA-- 434
           +QIH   +K     DV V +ALL +YA  G +   + VF  +   + VSWN++I  FA  
Sbjct: 61  EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120

Query: 435 -DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE 493
            D E      +  + +M+R G+     T+ ++ +A +     + G  VHA +IK      
Sbjct: 121 GDGET----TLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLS 176

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM 553
             + N +L  Y K G M D  K+F  + +++D V+WNSM++ +    L  +A+     M 
Sbjct: 177 AFVGNTILDMYAKSGSMIDARKVFDHV-DKKDLVTWNSMLTAFAQYGLGREAVTHFEEMR 235

Query: 554 QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID 613
           + G  L+  TF ++L+AC+    ++ G +         LE ++     +VD+  + G ++
Sbjct: 236 KCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLN 295

Query: 614 YASRFFDLMPVRNVYS-WNSMISGYARH 640
            A  F   MP++   + W +++     H
Sbjct: 296 DALVFIFKMPMKPTAAVWGALLGSCRMH 323



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 142/316 (44%), Gaps = 15/316 (4%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   +K+ +  DV++ + L+++Y R G +  A  +FD++  +N VSW  +++G+  KG  
Sbjct: 64  HALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDG 123

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
                MF EM R GF    +   SV  A    G    + G  VH  ++KS +     V N
Sbjct: 124 ETTLLMFAEMQRNGFEATHFTYSSVFSAI--AGIGALEQGKWVHAHMIKSGERLSAFVGN 181

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            ++ MY       D AR++F+ ++ +DL++WNS+++ ++Q G        F  M++ G  
Sbjct: 182 TILDMYAKSGSMID-ARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 240

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
                N+ TF S++TA     L      +Q   M+K+  L  ++     +V    R G  
Sbjct: 241 L----NQITFLSILTACSHGGLVKEG--KQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLL 294

Query: 248 YYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMY 301
             A     +M  K   ++ G + G  R       G      +F++     G    L N+Y
Sbjct: 295 NDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIY 354

Query: 302 AKCGTIDDSRSVFRFM 317
           A  G  D +  V + M
Sbjct: 355 ASTGQWDAAARVRKMM 370



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 53/99 (53%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  ++K G     F+ NT++++Y + G +  A K+FD +  ++ V+W  +++ +
Sbjct: 159 EQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAF 218

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G+  EA   F+EM + G  LN+    S+L AC   G
Sbjct: 219 AQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGG 257


>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
 gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
 gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
 gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 219/547 (40%), Positives = 327/547 (59%), Gaps = 4/547 (0%)

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           + D+   N +++ YA+ G L    K+F  M E D  SW +++  +   +      V Y L
Sbjct: 148 NRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSL 207

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
             R     PN  T    +AAA++    + G ++H  +++  + ++  + ++L+  YGKCG
Sbjct: 208 MQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCG 267

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
            +D+   IF ++ E+ D VSW SMI  Y  +    +  +L   ++   +R + +TFA VL
Sbjct: 268 CIDEARNIFDKIVEK-DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
           +ACA + T E G +VH    R   +      S+LVDMY+KCG I+ A    D  P  ++ 
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLV 386

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           SW S+I G A++G  D+AL  F  +   G  PDHVTFV VLSAC+HAGLV++G + F S+
Sbjct: 387 SWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSI 446

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT 748
           ++ + L    + ++C+VDLL R+G  ++++  I++MP+ P+  +W +VLG C  +     
Sbjct: 447 TEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGC--STYGNI 504

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
           +L  +AA  LF++EP+N V YV +AN+YA+ GKWE+  K RK M+E  V K  G SW  +
Sbjct: 505 DLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEI 564

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
           K   HVF+A D SHP  + I E L+EL +KM++ GYVP T   L D+E E KE+ + YHS
Sbjct: 565 KRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHS 624

Query: 869 EKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGK 927
           EK+AVAF +L+      I++ KNLR C DCH A KFIS I  R+I +RDS RFH F +G+
Sbjct: 625 EKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQ 684

Query: 928 CSCGDYW 934
           CSCGDYW
Sbjct: 685 CSCGDYW 691



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 220/466 (47%), Gaps = 39/466 (8%)

Query: 261 NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
           N++ +        +GK+VH ++  SG    + + N L+ MYAKCG++ D+R VF  M  +
Sbjct: 90  NLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNR 149

Query: 321 DSVSWNTMISGLDQNGCY-------------------------------EEAIMNFCAMR 349
           D  SWN M++G  + G                                 EEA++ +  M+
Sbjct: 150 DLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQ 209

Query: 350 RDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           R      N F++   +++ A++  I  G++IHG  ++ GLDSD  + ++L+ +Y   G +
Sbjct: 210 RVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCI 269

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
                +F  + E D VSW S+I  +  S     E    + ++  +   PN  TF  +L A
Sbjct: 270 DEARNIFDKIVEKDVVSWTSMIDRYFKSSRW-REGFSLFSELVGSCERPNEYTFAGVLNA 328

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
            +  +  +LG QVH  + +      +   ++L+  Y KCG ++  + +      + D VS
Sbjct: 329 CADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHV-VDGCPKPDLVS 387

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-VHACG 587
           W S+I G   N    +A+     +++ G + DH TF  VLSAC     +E+G+E  ++  
Sbjct: 388 WTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSIT 447

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKA 646
            +  L       + LVD+ ++ GR +        MP++ + + W S++ G + +G+ D A
Sbjct: 448 EKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLA 507

Query: 647 LTLFSQM-KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
                ++ K++   P  VT+V + +  + AG  +E  K  K M ++
Sbjct: 508 EEAAQELFKIEPENP--VTYVTMANIYAAAGKWEEEGKMRKRMQEI 551



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/423 (23%), Positives = 194/423 (45%), Gaps = 60/423 (14%)

Query: 206 SSVLSGSYLLQQILAMVKKAGLL------------SDLYVGSALVSGFARLGNFYYARKI 253
           S  + G  +  ++L M  K G L             DL   + +V+G+A +G    ARK+
Sbjct: 114 SGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKL 173

Query: 254 FEQMIQKNVVSMNGLMEGR----------------------------------------- 272
           F++M +K+  S   ++ G                                          
Sbjct: 174 FDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKC 233

Query: 273 -RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
            R+GKE+HG+++R+GL     + + L++MY KCG ID++R++F  ++ KD VSW +MI  
Sbjct: 234 IRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDR 293

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
             ++  + E    F  +       + ++    L++CA L    LG+Q+HG   ++G D  
Sbjct: 294 YFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPY 353

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
              S++L+ +Y   G +     V    P+ D VSW S+IG  A +     EA+KY+  + 
Sbjct: 354 SFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQN-GQPDEALKYFDLLL 412

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEM 510
           ++G  P+ VTF+N+L+A +   + + G +    +  K+ +++ +     L+    + G  
Sbjct: 413 KSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRF 472

Query: 511 DDCEKIFARMSERRDEVSWNSMISG---YIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
           +  + + + M  +  +  W S++ G   Y + +L  +A   + F ++    + + T A +
Sbjct: 473 EQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQEL-FKIEPENPVTYVTMANI 531

Query: 568 LSA 570
            +A
Sbjct: 532 YAA 534



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 39/338 (11%)

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
           + L+ EAV+     ++    P   T+ N++   S     + G +VH  +          I
Sbjct: 67  QKLLREAVQLLGRAKK----PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVI 122

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSER------------------------------RDE 526
            N LL  Y KCG + D  K+F  M  R                              +D 
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDS 182

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQR--GQRLDHFTFATVLSACASVATLERGMEVH 584
            SW +M++GY+  +  P+   +++ +MQR    R + FT +  ++A A+V  + RG E+H
Sbjct: 183 YSWTAMVTGYVKKD-QPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIH 241

Query: 585 ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGD 644
              VRA L+ D V+ S+L+DMY KCG ID A   FD +  ++V SW SMI  Y +     
Sbjct: 242 GHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWR 301

Query: 645 KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCM 704
           +  +LFS++      P+  TF GVL+AC+     + G +    M++V G  P     S +
Sbjct: 302 EGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSFASSSL 360

Query: 705 VDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
           VD+  + G ++  +  ++  P  P+ + W +++G C +
Sbjct: 361 VDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQ 397



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 200/450 (44%), Gaps = 60/450 (13%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ K  H  I   GF   + + N L+ +Y + G L  A K+FDEMP+R+  SW  +V+GY
Sbjct: 102 EEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGY 161

Query: 62  THKGMSNEACKMFKEMVR----------AGFLLNRYA-----LGSVLRACQECGPSGF-- 104
              G+  EA K+F EM             G++          L S+++      P+ F  
Sbjct: 162 AEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTV 221

Query: 105 -------------KFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE 151
                        + G ++H  ++++    D ++ + L+ MYG C    D AR IF++I 
Sbjct: 222 SIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC-GCIDEARNIFDKIV 280

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
            +D++SW S+I  Y +       F LFS +     R    PNEYTF  ++ A   + L+ 
Sbjct: 281 EKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCER----PNEYTFAGVLNAC--ADLTT 334

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             L +Q+   + + G     +  S+LV  + + GN   A+ + +   + ++VS   L+ G
Sbjct: 335 EELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGG 394

Query: 272 ---RRKGKEVHGY---LIRSGL-FDMVAVGNGLVNMYAKC---GTIDDSRSVFRFMIGKD 321
                +  E   Y   L++SG   D V      VN+ + C   G ++     F  +  K 
Sbjct: 395 CAQNGQPDEALKYFDLLLKSGTKPDHVT----FVNVLSACTHAGLVEKGLEFFYSITEKH 450

Query: 322 SVS-----WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
            +S     +  ++  L ++G +E+       M    +  S F   S L  C++ G I L 
Sbjct: 451 RLSHTSDHYTCLVDLLARSGRFEQLKSVISEM---PMKPSKFLWASVLGGCSTYGNIDLA 507

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
           ++   E  K+  ++ V+    + ++YA AG
Sbjct: 508 EEAAQELFKIEPENPVTYV-TMANIYAAAG 536



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 186/442 (42%), Gaps = 83/442 (18%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G +VH  +  S      ++ N L+ MY  C    D AR++F+E+  RDL SWN +++ Y+
Sbjct: 104 GKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVD-ARKVFDEMPNRDLCSWNVMVNGYA 162

Query: 167 QRGDTISVFKLFSRMQRE----------GFRYSLKPNE----YTFGSLITAAYSSVLSGS 212
           + G      KLF  M  +          G+    +P E    Y+    +  +  ++ + S
Sbjct: 163 EVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVS 222

Query: 213 YLL------------QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
             +            ++I   + +AGL SD  + S+L+  + + G    AR IF+++++K
Sbjct: 223 IAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK 282

Query: 261 NVVSMNGLMEGRRK-----------------------------------------GKEVH 279
           +VVS   +++   K                                         GK+VH
Sbjct: 283 DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVH 342

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
           GY+ R G        + LV+MY KCG I+ ++ V       D VSW ++I G  QNG  +
Sbjct: 343 GYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPD 402

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH---GEGLKLGLDSDVSVSN 396
           EA+  F  + + G    + + ++ LS+C   G +  G +      E  +L   SD     
Sbjct: 403 EALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYT-- 460

Query: 397 ALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFAD--SEALVSEAVKYYLDMRRA 453
            L+ L A +G   +   V   MP +  +  W SV+G  +   +  L  EA +    +   
Sbjct: 461 CLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE-- 518

Query: 454 GWSPNGVTFI---NILAAASSF 472
               N VT++   NI AAA  +
Sbjct: 519 --PENPVTYVTMANIYAAAGKW 538



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 113/251 (45%), Gaps = 20/251 (7%)

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
            +LL +A+ L    + R ++    T+  ++  C+    LE G +VH     +     +VI
Sbjct: 67  QKLLREAVQL----LGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVI 122

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            + L+ MY+KCG +  A + FD MP R++ SWN M++GYA  G  ++A  LF +M     
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK-- 180

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG-----RAGE 713
             D  ++  +++        +E    +  M +V    P +   S  V         R G+
Sbjct: 181 --DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGK 238

Query: 714 LDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLA 773
             +I   I +  +  + ++W +++    +  C       +A N+  ++  ++ V++  + 
Sbjct: 239 --EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCID-----EARNIFDKIVEKDVVSWTSMI 291

Query: 774 NMYASGGKWED 784
           + Y    +W +
Sbjct: 292 DRYFKSSRWRE 302


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 243/699 (34%), Positives = 360/699 (51%), Gaps = 71/699 (10%)

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           C     S S     I K  +S    I    +   +   I  F  M   G++  +  L + 
Sbjct: 21  CSATKASLSQAHAHILKTGISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTV 80

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP---- 419
           + +CA+L  +  G+Q+H   L  GL  D  V ++LL +Y    +L     VF  +P    
Sbjct: 81  IKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGV 140

Query: 420 -------------------------------EHDQVSWNSVIGAFADSEALVSEAVKYYL 448
                                          E + VSWN +I  F  S + + +AV  + 
Sbjct: 141 VTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYL-DAVLMFQ 199

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
           +M   G  P+G +  ++L A     M  +G Q+H  VIK  +  +  + +AL+  YGKC 
Sbjct: 200 NMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCA 259

Query: 509 EMDDCEKIFARMSE--------------------------------RRDEVSWNSMISGY 536
              +   +F  M E                                  + VSW SMI+  
Sbjct: 260 CASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASC 319

Query: 537 IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
             N    +A+ L   M   G + +  T   +L AC ++A L  G   H   +R  +  DV
Sbjct: 320 SQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDV 379

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
            +GSAL+DMY+KCGR+  +   FD+MP RN+ SWNS+++GYA HG   +A+ +F  M+  
Sbjct: 380 YVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRC 439

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
           G  PDHV+F  VLSAC+  GL +EG+ +F SMS+ +G+  ++E +SCMV LLGR+G L++
Sbjct: 440 GQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEE 499

Query: 717 IEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMY 776
               I +MP  P+S +W  +L +C   N  + +LG  AA  +FE+EP+N  NY+LL+N+Y
Sbjct: 500 AYAMIKQMPFEPDSCVWGALLSSCRVHN--RVDLGEIAAKRVFELEPRNPGNYILLSNIY 557

Query: 777 ASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELN 836
           AS   W +V   R  M+   +KK  G SW+ +K+ VH+ +AGD SHP+   I EKL +L 
Sbjct: 558 ASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLT 617

Query: 837 QKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCG 895
            +M+ +GYVP T F L D+E + KE ++  HSEK+AV   +L      P++++KNLR+C 
Sbjct: 618 VEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTKPGFPLQVIKNLRICR 677

Query: 896 DCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           DCH+  KFIS    REI +RD+NRFH F  G CSCGDYW
Sbjct: 678 DCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCGDYW 716



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 135/534 (25%), Positives = 228/534 (42%), Gaps = 88/534 (16%)

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSY 213
           IS    I ++S+      V ++FS M  +G    + P+     ++I   AA S++ +G  
Sbjct: 40  ISLPETIQIFSKLNHFGHVIRVFSYMLTQG----IVPDSRVLPTVIKTCAALSALQTGKQ 95

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR 273
           +     A+V   GL  D  V S+L+  + +  +   AR +F+++ Q  VV+         
Sbjct: 96  M--HCFALVSGLGL--DSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVT--------- 142

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF----RFMIGKDSVSWNTMI 329
                                + L++ +A+ G + +++ +F       +  + VSWN MI
Sbjct: 143 --------------------SSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMI 182

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
           SG +++G Y +A++ F  M  +GL     S+ S L +   L   ++G QIH   +K GL 
Sbjct: 183 SGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLG 242

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD--------------------------- 422
            D  V +AL+ +Y      S    VF  M E D                           
Sbjct: 243 PDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQF 302

Query: 423 ------QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
                  VSW S+I + + +   + EA++ + +M+  G  PN VT   +L A  + +   
Sbjct: 303 KGMDLNVVSWTSMIASCSQNGKDM-EALELFREMQIEGVKPNSVTIPCLLPACGNIAALL 361

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY 536
            G   H   ++  + N+  + +AL+  Y KCG M      F  M   R+ VSWNS+++GY
Sbjct: 362 HGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPN-RNLVSWNSLMAGY 420

Query: 537 IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG-----MEVHACGVRAC 591
             +    +A+N+   M + GQ+ DH +F  VLSAC      E G           GV A 
Sbjct: 421 AMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEAR 480

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGD 644
           +E      S +V +  + GR++ A      MP   +   W +++S    H   D
Sbjct: 481 MEHY----SCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVD 530



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 115/516 (22%), Positives = 226/516 (43%), Gaps = 92/516 (17%)

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
           ++F  M+  G + +   L +V++ C     S  + G Q+HC  L S    D +V + L+ 
Sbjct: 60  RVFSYMLTQGIVPDSRVLPTVIKTCAAL--SALQTGKQMHCFALVSGLGLDSVVLSSLLH 117

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY       D AR +F+++    +++ +++IS ++++G      +LF +           
Sbjct: 118 MYVQFDHLKD-ARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQ----------- 165

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
                                          +  G+  +L   + ++SGF R G++  A 
Sbjct: 166 ------------------------------TRDLGVELNLVSWNGMISGFNRSGSYLDAV 195

Query: 252 KIFEQMIQK----------NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
            +F+ M  +          +V+   G ++    G ++H Y+I+ GL     V + L++MY
Sbjct: 196 LMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMY 255

Query: 302 AKC-------------------------------GTIDDSRSVFRFMIGKD--SVSWNTM 328
            KC                               G +D++  VF+   G D   VSW +M
Sbjct: 256 GKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSM 315

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           I+   QNG   EA+  F  M+ +G+  ++ ++   L +C ++  ++ G+  H   L+ G+
Sbjct: 316 IASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGI 375

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
            +DV V +AL+ +YA  G +      F +MP  + VSWNS++  +A       EA+  + 
Sbjct: 376 FNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYA-MHGKTFEAINIFE 434

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGK 506
            M+R G  P+ V+F  +L+A +   + + G   +   +  N   E  +E+   +++  G+
Sbjct: 435 LMQRCGQKPDHVSFTCVLSACTQGGLTEEG-WFYFDSMSRNHGVEARMEHYSCMVTLLGR 493

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
            G +++   +  +M    D   W +++S   +HN +
Sbjct: 494 SGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRV 529



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 104/419 (24%), Positives = 168/419 (40%), Gaps = 104/419 (24%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP-------------- 47
           +  K  H   L  G   D  + ++L+++YV+   L  A  +FD++P              
Sbjct: 91  QTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRF 150

Query: 48  ---------------------DRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNR 86
                                + N VSW  ++SG+   G   +A  MF+ M   G   + 
Sbjct: 151 ARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDG 210

Query: 87  YALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST------ 140
            ++ SVL A  +        G+Q+HC V+K     D  V + LI MYG C  ++      
Sbjct: 211 TSVSSVLPAVGDLDMP--LMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVF 268

Query: 141 ------------------------DCARRIFEEIETRDL--ISWNSIISVYSQRGDTISV 174
                                   D A  +F++ +  DL  +SW S+I+  SQ G  +  
Sbjct: 269 NEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEA 328

Query: 175 FKLFSRMQREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLY 232
            +LF  MQ EG    +KPN  T   L+ A    +++L G    +       + G+ +D+Y
Sbjct: 329 LELFREMQIEG----VKPNSVTIPCLLPACGNIAALLHG----KAAHCFSLRNGIFNDVY 380

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA 292
           VGSAL+  +A+ G    +R  F+ M  +N+VS N LM          GY +    F+ + 
Sbjct: 381 VGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMA---------GYAMHGKTFEAI- 430

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
               +  +  +CG               D VS+  ++S   Q G  EE    F +M R+
Sbjct: 431 ---NIFELMQRCGQ------------KPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRN 474



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 14/243 (5%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVSGYTHKGMSNEACKMFKE 76
           DV  CN L+    R G + +A ++F +    D N VSW  +++  +  G   EA ++F+E
Sbjct: 275 DVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFRE 334

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
           M   G   N   +  +L AC     +    G   HC  L++    D  V + LI MY  C
Sbjct: 335 MQIEGVKPNSVTIPCLLPACGNI--AALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKC 392

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
                 +R  F+ +  R+L+SWNS+++ Y+  G T     +F  MQR G     KP+  +
Sbjct: 393 GRML-ASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCG----QKPDHVS 447

Query: 197 FGSLITAAYSSVLS--GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
           F  +++A     L+  G +      +M +  G+ + +   S +V+   R G    A  + 
Sbjct: 448 FTCVLSACTQGGLTEEGWFYFD---SMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMI 504

Query: 255 EQM 257
           +QM
Sbjct: 505 KQM 507


>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 643

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 245/665 (36%), Positives = 369/665 (55%), Gaps = 49/665 (7%)

Query: 276 KEVHGYLIRSGL-FDMVAVGNGLVNMYAKC-GTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           K+VH Y+ ++GL  D +  G  L++        +D +R +F      D    NT+I GL 
Sbjct: 22  KQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDVFMHNTLIRGLA 81

Query: 334 QNGCYEEAIMNFCAMRRDGLMS-SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
           ++   + +++ F  MRR       +FS    L + AS   +  G Q+H + +  GLD+ +
Sbjct: 82  ESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQAIVHGLDTHL 141

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V   L+S+Y++ G+++   KVF  M E + V+WN+V+ A                D++ 
Sbjct: 142 FVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCG-----------DVKG 190

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           A    N + F N+                             T  N +L+ Y K GE++ 
Sbjct: 191 ADMMFNRMPFRNL-----------------------------TSWNVMLAGYTKAGELEL 221

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
             K+F  M   +D+VSW++MI G+ HN    +A      + Q G R +  +    LSACA
Sbjct: 222 ARKLFLEMP-VKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACA 280

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP-VRNVYSWN 631
               +E G  +H    ++   + V + +AL+D YSKCG +  A   F+ MP  R++ SW 
Sbjct: 281 DAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWT 340

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           SMI+G A HG+G++A+ LF +M+  G  PD + F+ +L ACSHAGL+++G+++F  M  +
Sbjct: 341 SMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDI 400

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
           Y + P +E + CMVDL GRAG+LDK  EFI  MP+ P ++IWRT+LGAC        +L 
Sbjct: 401 YNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHG--NVKLA 458

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
            +    L E++P N+ ++VLL+N+YA  GKW+DVA  R++M +  + K  G S + +   
Sbjct: 459 ERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKI 518

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAG-YVPQTKFALFDLEPESKEDLVSYHSEK 870
           ++ FVAG+  +   +  YEKLKE+  K+R  G Y+P+    L D+E E KED VS HSEK
Sbjct: 519 MYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGCYIPEVGSVLHDIEDEEKEDSVSRHSEK 578

Query: 871 IAVAFVLTRNSKLP-IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +AVAF + R  K   IRI+KNLRVC DCH+  K ISK+ G EIV+RD +RFH F  G CS
Sbjct: 579 LAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMKLISKVYGLEIVVRDRSRFHSFKTGSCS 638

Query: 930 CGDYW 934
           C DYW
Sbjct: 639 CRDYW 643



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 212/432 (49%), Gaps = 15/432 (3%)

Query: 109 QVHCLVLKSNQTFDGLVS-NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQ 167
           QVH  V K+    D +++  +L+    S  ++ D ARR+F      D+   N++I   ++
Sbjct: 23  QVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDVFMHNTLIRGLAE 82

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKA 225
                +    F  M+R   R +   + ++F  L+ AA  Y S+ SG  L  Q +      
Sbjct: 83  SDTPQNSLITFVEMRR---RLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQAIV----H 135

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHG--YLI 283
           GL + L+VG+ LVS ++  G   +A+K+FE+M + NVV+ N ++    +  +V G   + 
Sbjct: 136 GLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKGADMMF 195

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
               F  +   N ++  Y K G ++ +R +F  M  KD VSW+TMI G   NG + EA  
Sbjct: 196 NRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFG 255

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            F  +++ G+  +  SL   LS+CA  G I  G+ +HG   K G    VSV+NALL  Y+
Sbjct: 256 FFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYS 315

Query: 404 DAGYLSRCLKVFFLMPEHDQ-VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
             G +     VF  MPE    VSW S+I   A       EA++ + +M  +G  P+G+ F
Sbjct: 316 KCGNVGMARLVFERMPEKRSIVSWTSMIAGLA-MHGYGEEAIQLFHEMEESGIRPDGIAF 374

Query: 463 INILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           I+IL A S   + + G++   ++   YN+         ++  YG+ G++D   +    M 
Sbjct: 375 ISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMP 434

Query: 522 ERRDEVSWNSMI 533
                + W +++
Sbjct: 435 VLPTAIIWRTLL 446



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 213/488 (43%), Gaps = 34/488 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLI-NVYVRVGD-LASASKLFDEMPDRNSVSWACIVS 59
           K+ K  H  + K G   D  +   L+ +  V V D L  A +LF   P+ +      ++ 
Sbjct: 19  KNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDVFMHNTLIR 78

Query: 60  GYTHKGMSNEACKMFKEMVRA-GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
           G         +   F EM R     L+ ++   +L+A         + G+Q+HC  +   
Sbjct: 79  GLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASY--RSLESGIQLHCQAIVHG 136

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
                 V   L++MY  C      A+++FEE+   ++++WN++++   + GD      +F
Sbjct: 137 LDTHLFVGTTLVSMYSEC-GFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKGADMMF 195

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           +RM    FR        T  +++ A Y+         +  L M  K     D    S ++
Sbjct: 196 NRMP---FR------NLTSWNVMLAGYTKAGELELARKLFLEMPVK-----DDVSWSTMI 241

Query: 239 SGFARLGNFYYARKIFEQMIQ----KNVVSMNGLMEGRRK------GKEVHGYLIRSGLF 288
            GFA  G FY A   F ++ Q     N VS+ G +           GK +HG++ +SG  
Sbjct: 242 VGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFL 301

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS-VSWNTMISGLDQNGCYEEAIMNFCA 347
            MV+V N L++ Y+KCG +  +R VF  M  K S VSW +MI+GL  +G  EEAI  F  
Sbjct: 302 WMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHE 361

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GLDSDVSVSNALLSLYADAG 406
           M   G+     + IS L +C+  G I  G +   +   +  ++  +     ++ LY  AG
Sbjct: 362 MEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAG 421

Query: 407 YLSRCLKVFFLMPE-HDQVSWNSVIGAFA-DSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
            L +  +    MP     + W +++GA +      ++E VK  L       S + V   N
Sbjct: 422 QLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSN 481

Query: 465 ILAAASSF 472
           I A A  +
Sbjct: 482 IYAVAGKW 489


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 260/794 (32%), Positives = 411/794 (51%), Gaps = 74/794 (9%)

Query: 58  VSGYTHKGMSNEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLK 116
           ++    + + NEA K F+ + +  GF L       ++ AC        + G ++H  +LK
Sbjct: 34  ITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYL--RSLEHGKKIHDHMLK 91

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
           S    D  + N ++ MYG C    D A+++F+ +  R+++SW S+I              
Sbjct: 92  SKSHPDLTLQNHILNMYGKCKSLKD-AQKVFDAMPERNVVSWTSVI-------------- 136

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
                                     A YS    G   L+    M++ +G++ D +   +
Sbjct: 137 --------------------------AGYSQNGQGGNALEFYFQMLQ-SGVMPDQFTFGS 169

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
           ++   + LG+                    GL      G+++H ++++S     +   N 
Sbjct: 170 IIKACSSLGDI-------------------GL------GRQLHAHVLKSEFGAHIIAQNA 204

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL-MS 355
           L++MY K   I D+  VF  M  +D +SW +MI+G  Q G   EA+  F  M   G+ + 
Sbjct: 205 LISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLP 264

Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
           + F   S  S+C+SL     G+Q+HG  +K GL  DV    +L  +YA  G LS    VF
Sbjct: 265 NEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVF 324

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
           + +   D V+WN++I  FA       EA+ ++  MR  G  P+ +T  ++L A +S S  
Sbjct: 325 YQIGRPDLVAWNAIIAGFAYG-GDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSEL 383

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             G QVH  + K  +  +  + N LL+ Y KC E+ D    F  M    D VSWN++++ 
Sbjct: 384 YQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTA 443

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
            + ++   +   L+  M     R D+ T   VL A A   ++E G +VH   ++  L  D
Sbjct: 444 CMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCD 503

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
             + + L+D+Y+KCG +  A + FD M   +V SW+S+I GYA+ G+G++AL LF  M+ 
Sbjct: 504 TSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRR 563

Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD 715
               P+HVTFVGVL+ACSH GLV+EG+K + +M + +G+ P  E  SCMVDLL RAG L+
Sbjct: 564 LDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLN 623

Query: 716 KIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANM 775
           + E FI++M   P+ ++W+T+L AC        ++G++AA  + +++P N+  +VLL N+
Sbjct: 624 EAEGFIHQMAFDPDIVVWKTLLAAC--KTHGNVDVGKRAAENILKIDPSNSAAHVLLCNI 681

Query: 776 YASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKEL 835
           YAS G WEDVA+ R  MK+  V+K  G SW+ +KD +HVF   D  HPE++ IY  L+EL
Sbjct: 682 YASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIYTMLEEL 741

Query: 836 NQKMRDAGYVPQTK 849
             +M DAGYVP  K
Sbjct: 742 LLQMLDAGYVPFQK 755



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 172/577 (29%), Positives = 276/577 (47%), Gaps = 52/577 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  +LK     D+ L N ++N+Y +   L  A K+FD MP+RN VSW  +++GY
Sbjct: 80  EHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGY 139

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G    A + + +M+++G + +++  GS+++AC   G  G   G Q+H  VLKS    
Sbjct: 140 SQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIG--LGRQLHAHVLKSEFGA 197

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
             +  N LI+MY       D A  +F  + TRDLISW S+I+ +SQ G  +     F  M
Sbjct: 198 HIIAQNALISMYTKSNLIID-ALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEM 256

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             +G      PNE+ FGS+ +A  SS+L   Y  +Q+  M  K GL  D++ G +L   +
Sbjct: 257 LHQGVYL---PNEFIFGSVFSAC-SSLLQPEY-GRQLHGMSIKFGLGRDVFAGCSLCDMY 311

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG------------------------------ 271
           A+ G    AR +F Q+ + ++V+ N ++ G                              
Sbjct: 312 AKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVR 371

Query: 272 -----------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM-IG 319
                        +G +VHGY+ + GL   V V N L+ MYAKC  + D+   F  M   
Sbjct: 372 SLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCN 431

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
            D VSWN +++   ++   EE       M          +L + L + A    I +G Q+
Sbjct: 432 ADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQV 491

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           H   LK GL+ D SV+N L+ LYA  G L    K+F  M   D VSW+S+I  +A     
Sbjct: 492 HCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQF-GY 550

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIEN 498
             EA+K +  MRR    PN VTF+ +L A S   + + G +++  + K + +A      +
Sbjct: 551 GEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCS 610

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
            ++    + G +++ E    +M+   D V W ++++ 
Sbjct: 611 CMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAA 647



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 161/317 (50%), Gaps = 5/317 (1%)

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY-LDMRRAGWSPN 458
           +L    G+ +  +K   L     + S N  I +    + L +EA+K +    ++ G+   
Sbjct: 4   ALRPQVGFATNNVKETVLSKLRAEQSSNEYITSLC-KQKLFNEAIKAFEFLQKKTGFCLT 62

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
             T+  +++A S     + G ++H  ++K     + T++N +L+ YGKC  + D +K+F 
Sbjct: 63  LSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFD 122

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
            M E R+ VSW S+I+GY  N     A+   + M+Q G   D FTF +++ AC+S+  + 
Sbjct: 123 AMPE-RNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIG 181

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
            G ++HA  +++     ++  +AL+ MY+K   I  A   F  M  R++ SW SMI+G++
Sbjct: 182 LGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFS 241

Query: 639 RHGHGDKALTLFSQMKLDGP-LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
           + G+  +AL  F +M   G  LP+   F  V SACS + L  E  +    MS  +GL   
Sbjct: 242 QLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACS-SLLQPEYGRQLHGMSIKFGLGRD 300

Query: 698 LEQFSCMVDLLGRAGEL 714
           +     + D+  + G L
Sbjct: 301 VFAGCSLCDMYAKCGLL 317



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 186/416 (44%), Gaps = 27/416 (6%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +  H   +K G   DVF   +L ++Y + G L+ A  +F ++   + V+W  I++G+ +
Sbjct: 285 GRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAY 344

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G + EA   F +M   G + +   + S+L AC    PS    GMQVH  + K     D 
Sbjct: 345 GGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTS--PSELYQGMQVHGYINKMGLDLDV 402

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETR-DLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            V N L+ MY  C E  D A   FEE+    DL+SWN+I++   +      VF+L   M 
Sbjct: 403 PVCNTLLTMYAKCSELRD-AIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMC 461

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
               R    P+  T  +++ A+  +V     +  Q+     K GL  D  V + L+  +A
Sbjct: 462 ISQHR----PDYITLTNVLGASAETV--SIEIGNQVHCYALKTGLNCDTSVTNGLIDLYA 515

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---GKEVHGYLIRSGLFDMVAVGNGLVN 299
           + G+   A KIF+ MI  +VVS + L+ G  +   G+E           D+       V 
Sbjct: 516 KCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVG 575

Query: 300 MYAKC---GTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           +   C   G +++   ++      F I       + M+  L + GC  EA      M  D
Sbjct: 576 VLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFD 635

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL-SLYADAG 406
             +    +L   L++C + G + +G++     LK  +D   S ++ LL ++YA  G
Sbjct: 636 PDIVVWKTL---LAACKTHGNVDVGKRAAENILK--IDPSNSAAHVLLCNIYASKG 686



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 37/273 (13%)

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR-GQRLDHFTFATVLSACASVATLE 578
           +S+ R E S N  I+     +L  +A+    F+ ++ G  L   T+A ++SAC+ + +LE
Sbjct: 21  LSKLRAEQSSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLE 80

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
            G ++H   +++    D+ + + +++MY KC  +  A + FD MP RNV SW S+I+GY+
Sbjct: 81  HGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYS 140

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYG---- 693
           ++G G  AL  + QM   G +PD  TF  ++ ACS  G +  G + H   +   +G    
Sbjct: 141 QNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHII 200

Query: 694 --------------LIPQLEQFSCMV--DLLGRAG----------ELDKI---EEFINKM 724
                         +I  L+ FS M   DL+              EL+ +   +E +++ 
Sbjct: 201 AQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQG 260

Query: 725 PITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
              PN  I+ +V  AC  ++  + E GR+   M
Sbjct: 261 VYLPNEFIFGSVFSAC--SSLLQPEYGRQLHGM 291


>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
 gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
          Length = 739

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 271/777 (34%), Positives = 409/777 (52%), Gaps = 107/777 (13%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A R+F  +  R   ++N++++ YS  G       LF  + R        P+ Y++ +L+ 
Sbjct: 57  AERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR--------PDNYSYNTLLH 108

Query: 203 A-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
           A A SS L+ +  L   +        + D    + ++S  A  G    AR  F+   +K+
Sbjct: 109 ALAVSSSLADARGLFDEMP-------VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKD 161

Query: 262 VVSMNGLMEGR-RKGK--EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
            VS NG++    R G+  E  G       +D+++  N L++ Y + G + ++R +F  M 
Sbjct: 162 AVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVIS-WNALMSGYVQWGKMSEARELFDRMP 220

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
           G+D VSWN M+SG  + G   EA       RR             L   A +        
Sbjct: 221 GRDVVSWNIMVSGYARRGDMVEA-------RR-------------LFDAAPV-------- 252

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
                       DV    A++S YA  G L    +VF  MPE + VSWN+++ A+     
Sbjct: 253 -----------RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRR- 300

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
           ++ EA + +                N++                      NVA+     N
Sbjct: 301 MMDEAKELF----------------NMMPC-------------------RNVASW----N 321

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
            +L+ Y + G +++ + +F  M ++ D VSW +M++ Y       + + L   M + G+ 
Sbjct: 322 TMLTGYAQAGMLEEAKAVFDTMPQK-DAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 380

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
           ++   FA VLS CA +A LE GM++H   +RA       +G+AL+ MY KCG ++ A   
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 440

Query: 619 FDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLV 678
           F+ M  R+V SWN+MI+GYARHG G +AL +F  M+     PD +T VGVL+ACSH+GLV
Sbjct: 441 FEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 500

Query: 679 DEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
           ++G  +F SM   +G+  + E ++CM+DLLGRAG L +  + +  MP  P+S +W  +LG
Sbjct: 501 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLG 560

Query: 739 ACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVK 798
           A  R + R  ELGR AA  +FE+EP+NA  YVLL+N+YAS GKW D  K R  M+E  VK
Sbjct: 561 A-SRIH-RNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVK 618

Query: 799 KEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPE 858
           K  G SW+ +++ VH F AGD  HPEK+ IY  L++L+ +M+ AGYV  T   L D+E E
Sbjct: 619 KVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEE 678

Query: 859 SKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFK----FISKIVGR 910
            KE ++ YHSEK+AVA+ +L      PIR++KNLRVCGDCH+AFK     + K+ GR
Sbjct: 679 EKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKAWIELMLKVSGR 735



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 143/553 (25%), Positives = 245/553 (44%), Gaps = 68/553 (12%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +V   N  I  ++R G +A A +LF  MP R++ ++  +++GY+  G    A  +F+ + 
Sbjct: 37  EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGM--------QVHCLVLKSNQTFDGLVS---- 126
           R     + Y+  ++L A           G+         V   V+ S+    GLVS    
Sbjct: 97  RP----DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARH 152

Query: 127 -------------NVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD 170
                        N ++A Y   G   E    AR +F      D+ISWN+++S Y Q G 
Sbjct: 153 YFDLAPEKDAVSWNGMLAAYVRNGRVEE----ARGLFNSRTEWDVISWNALMSGYVQWGK 208

Query: 171 TISVFKLFSRMQ-REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLS 229
                +LF RM  R+   +++  + Y       A    ++    L          A  + 
Sbjct: 209 MSEARELFDRMPGRDVVSWNIMVSGY-------ARRGDMVEARRLFD--------AAPVR 253

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSG 286
           D++  +A+VSG+A+ G    AR++F+ M ++N VS N ++     RR   E         
Sbjct: 254 DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEA------KE 307

Query: 287 LFDM-----VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           LF+M     VA  N ++  YA+ G ++++++VF  M  KD+VSW  M++   Q GC EE 
Sbjct: 308 LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +  F  M R G   +  +    LS+CA +  +  G Q+HG  ++ G      V NALL++
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y   G +      F  M E D VSWN++I  +A       EA++ +  MR     P+ +T
Sbjct: 428 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYA-RHGFGKEALEIFDMMRTTSTKPDDIT 486

Query: 462 FINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
            + +LAA S   + + G    ++    + V  +      ++   G+ G + +   +   M
Sbjct: 487 LVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDM 546

Query: 521 SERRDEVSWNSMI 533
               D   W +++
Sbjct: 547 PFEPDSTMWGALL 559



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 148/310 (47%), Gaps = 23/310 (7%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           NT++  Y + G L  A  +FD MP +++VSWA +++ Y+  G S E  ++F EM R G  
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 380

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           +NR A   VL  C +   +  + GMQ+H  ++++       V N L+AMY  C    D A
Sbjct: 381 VNRSAFACVLSTCADI--AALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMED-A 437

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF-GSLIT 202
           R  FEE+E RD++SWN++I+ Y++ G      ++F  M+      S KP++ T  G L  
Sbjct: 438 RNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTT----STKPDDITLVGVLAA 493

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
            ++S ++     +    +M    G+ +     + ++    R G    A  + + M  +  
Sbjct: 494 CSHSGLVEKG--ISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPD 551

Query: 263 VSMNGLMEGRRKGKEVH-----GYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSV 313
            +M G + G      +H     G      +F++     G    L N+YA  G   D+R +
Sbjct: 552 STMWGALLG---ASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKM 608

Query: 314 FRFMIGKDSV 323
            R M+ +  V
Sbjct: 609 -RVMMEERGV 617



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 147/348 (42%), Gaps = 82/348 (23%)

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
           E    N  ++ + + G + D E++FA M  RR   ++N+M++GY  N  LP A +L    
Sbjct: 37  EVIRSNKAITAHMRAGRVADAERLFAAMP-RRSTSTYNAMLAGYSANGRLPLAASL---- 91

Query: 553 MQRGQRLDHFTFATVLSACASVATL--ERGMEVHACGVRACLEFDVVIGS---------- 600
            +   R D++++ T+L A A  ++L   RG+      VR  + ++V+I S          
Sbjct: 92  FRAIPRPDNYSYNTLLHALAVSSSLADARGL-FDEMPVRDSVTYNVMISSHANHGLVSLA 150

Query: 601 ----------------ALVDMYSKCGRID------------------------------- 613
                            ++  Y + GR++                               
Sbjct: 151 RHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMS 210

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
            A   FD MP R+V SWN M+SGYAR G   +A  LF       P+ D  T+  V+S  +
Sbjct: 211 EARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDA----APVRDVFTWTAVVSGYA 266

Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
             G+++E  + F +M +   +      ++ MV    +   +D+ +E  N MP   N   W
Sbjct: 267 QNGMLEEARRVFDAMPERNAV-----SWNAMVAAYIQRRMMDEAKELFNMMPCR-NVASW 320

Query: 734 RTVLGACCRANCRKTELGRKAANMLFEMEPQ-NAVNYVLLANMYASGG 780
            T+L    +A   +       A  +F+  PQ +AV++  +   Y+ GG
Sbjct: 321 NTMLTGYAQAGMLEE------AKAVFDTMPQKDAVSWAAMLAAYSQGG 362



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 143/306 (46%), Gaps = 53/306 (17%)

Query: 18  YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM 77
           +DV   N L++ YV+ G ++ A +LFD MP R+ VSW  +VSGY  +G   EA ++F   
Sbjct: 191 WDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD-- 248

Query: 78  VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS------NVLIA 131
             A  + + +   +V+    + G            ++ ++ + FD +        N ++A
Sbjct: 249 --AAPVRDVFTWTAVVSGYAQNG------------MLEEARRVFDAMPERNAVSWNAMVA 294

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-QREGFRYSL 190
            Y       D A+ +F  +  R++ SWN++++ Y+Q G       +F  M Q++   ++ 
Sbjct: 295 AYIQ-RRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAA 353

Query: 191 KPNEYTFGS------------------LITAAYSSVLSGSYLL------QQILAMVKKAG 226
               Y+ G                   +  +A++ VLS    +       Q+   + +AG
Sbjct: 354 MLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAG 413

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS- 285
                +VG+AL++ + + GN   AR  FE+M +++VVS N ++ G  +    HG+   + 
Sbjct: 414 YGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYAR----HGFGKEAL 469

Query: 286 GLFDMV 291
            +FDM+
Sbjct: 470 EIFDMM 475



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 48/94 (51%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H ++++ G+    F+ N L+ +Y + G++  A   F+EM +R+ VSW  +++GY   G 
Sbjct: 405 LHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGF 464

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
             EA ++F  M       +   L  VL AC   G
Sbjct: 465 GKEALEIFDMMRTTSTKPDDITLVGVLAACSHSG 498



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
           LE +V+  +  +  + + GR+  A R F  MP R+  ++N+M++GY+ +G    A +LF 
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93

Query: 652 QMKLDGPLPDHVTFVGVLSACS 673
            +    P PD+ ++  +L A +
Sbjct: 94  AI----PRPDNYSYNTLLHALA 111


>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 227/583 (38%), Positives = 335/583 (57%), Gaps = 10/583 (1%)

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
           S+++   S L SC S   +  G+Q+H    +LG+  ++ ++  L++ Y+    L     +
Sbjct: 56  SNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHL 115

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  +P+ +   WN +I A+A        A+  Y  M   G  P+  T   +L A S+ S 
Sbjct: 116 FDKIPKGNLFLWNVLIRAYA-WNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALST 174

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
              G  +H +VI+     +  +  AL+  Y KCG + D   +F ++ +R D V WNSM++
Sbjct: 175 IGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDR-DAVLWNSMLA 233

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
            Y  N    ++++L   M  +G R    T  TV+S+ A +A L  G E+H  G R   ++
Sbjct: 234 AYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQY 293

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           +  + +AL+DMY+KCG +  A   F+ +  + V SWN++I+GYA HG   +AL LF +M 
Sbjct: 294 NDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMM 353

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
            +   PDH+TFVG L+ACS   L+DEG   +  M +   + P +E ++CMVDLLG  G+L
Sbjct: 354 KEAQ-PDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQL 412

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
           D+  + I +M + P+S +W  +L +C        EL   A   L E+EP ++ NYV+LAN
Sbjct: 413 DEAYDLIRQMDVMPDSGVWGALLNSC--KTHGNVELAEVALEKLIELEPDDSGNYVILAN 470

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           MYA  GKWE VA+ R+ M +  +KK   CSW+ +K+ V+ F++GD SHP    IY +LK 
Sbjct: 471 MYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKR 530

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKLP---IRIMKNL 891
           L   MR+AGYVP T     D+E + K D+V  HSE++A+AF L   S LP   + I KNL
Sbjct: 531 LEGLMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLI--STLPGTRLLITKNL 588

Query: 892 RVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           R+C DCH A KFISKI  REI +RD NR+HHF  G CSCGDYW
Sbjct: 589 RICEDCHVAIKFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 197/405 (48%), Gaps = 18/405 (4%)

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
           N YY   + E  I    +           GK++H  L + G+   + +   LVN Y+ C 
Sbjct: 57  NHYYYASLLESCISAKAL---------EPGKQLHARLCQLGIAYNLDLATKLVNFYSVCN 107

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
           ++ ++  +F  +   +   WN +I     NG +E AI  +  M   GL   NF+L   L 
Sbjct: 108 SLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLK 167

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           +C++L  I  G+ IH   ++ G + DV V  AL+ +YA  G +     VF  + + D V 
Sbjct: 168 ACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVL 227

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           WNS++ A+A +     E++    +M   G  P   T + ++++++  +    G ++H   
Sbjct: 228 WNSMLAAYAQN-GHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFG 286

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
            ++       ++ AL+  Y KCG +     +F R+ E+R  VSWN++I+GY  + L  +A
Sbjct: 287 WRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKR-VVSWNAIITGYAMHGLAVEA 345

Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC-LEFDVVIGSALVD 604
           ++L   MM+  Q  DH TF   L+AC+    L+ G  ++   VR C +   V   + +VD
Sbjct: 346 LDLFERMMKEAQP-DHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVD 404

Query: 605 MYSKCGRIDYAS---RFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
           +   CG++D A    R  D+MP   V  W ++++    HG+ + A
Sbjct: 405 LLGHCGQLDEAYDLIRQMDVMPDSGV--WGALLNSCKTHGNVELA 447



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 158/316 (50%), Gaps = 13/316 (4%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------GKEVH 279
           +L++ + L+  +A  G    A  ++ QM++  +   N  +    K          G+ +H
Sbjct: 123 NLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIH 182

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
             +IRSG    V VG  LV+MYAKCG + D+R VF  ++ +D+V WN+M++   QNG  +
Sbjct: 183 ERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPD 242

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           E++   C M   G+  +  +L++ +SS A +  +  G++IHG G + G   +  V  AL+
Sbjct: 243 ESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALI 302

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
            +YA  G +     +F  + E   VSWN++I  +A    L  EA+  +  M +    P+ 
Sbjct: 303 DMYAKCGSVKVACVLFERLREKRVVSWNAIITGYA-MHGLAVEALDLFERMMKEA-QPDH 360

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE-NALLSCYGKCGEMDDCEKIFA 518
           +TF+  LAA S   +   G  ++  +++    N T      ++   G CG++D+   +  
Sbjct: 361 ITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIR 420

Query: 519 RMSERRDEVSWNSMIS 534
           +M    D   W ++++
Sbjct: 421 QMDVMPDSGVWGALLN 436



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 121/486 (24%), Positives = 218/486 (44%), Gaps = 46/486 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H ++ + G AY++ L   L+N Y     L +A  LFD++P  N   W  ++  Y
Sbjct: 75  EPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAY 134

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G    A  ++ +M+  G   + + L  VL+AC      G   G  +H  V++S    
Sbjct: 135 AWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIG--EGRVIHERVIRSGWER 192

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V   L+ MY  C    D AR +F++I  RD + WNS+++ Y+Q G       L   M
Sbjct: 193 DVFVGAALVDMYAKCGCVVD-ARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEM 251

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             +G R    P E T  ++I++  S+ ++     ++I     + G   +  V +AL+  +
Sbjct: 252 AAKGVR----PTEATLVTVISS--SADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMY 305

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS-GLFD-MVAVGNG--- 296
           A+ G+   A  +FE++ +K VVS N ++     G  +HG  + +  LF+ M+        
Sbjct: 306 AKCGSVKVACVLFERLREKRVVSWNAII----TGYAMHGLAVEALDLFERMMKEAQPDHI 361

Query: 297 -LVNMYAKCGT---IDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNFCA 347
             V   A C     +D+ R+++  M+    ++     +  M+  L   G  +EA   +  
Sbjct: 362 TFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEA---YDL 418

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           +R+  +M  +    + L+SC + G + L +    + ++L  D D      L ++YA +G 
Sbjct: 419 IRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPD-DSGNYVILANMYAQSGK 477

Query: 408 LSRCLKVFFLM-----PEHDQVSWNSV---IGAF-------ADSEALVSEAVKYYLDMRR 452
                ++  LM      ++   SW  V   + AF        +S A+ +E  +    MR 
Sbjct: 478 WEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMRE 537

Query: 453 AGWSPN 458
           AG+ P+
Sbjct: 538 AGYVPD 543


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 250/715 (34%), Positives = 394/715 (55%), Gaps = 19/715 (2%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKN-----------VVSMNGLMEGRRKGKEV 278
           +L+  + LV G+A+ G F  A  ++ +M+              V+   G +    +GKEV
Sbjct: 159 NLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEV 218

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H +++R G    + V N L+ MY KCG +  +R +F  M  +D +SWN MISG  +NG  
Sbjct: 219 HVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMC 278

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
            E +  F AMR   +     +L S +S+C  LG   LG+ IH   +  G   D+SV N+L
Sbjct: 279 HEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSL 338

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
             +Y +AG      K+F  M   D VSW ++I  + +   L  +A+  Y  M +    P+
Sbjct: 339 TQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY-EYNFLPDKAIDTYRMMDQDSVKPD 397

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
            +T   +L+A ++      G ++H   IK  + +   + N L++ Y KC  +D    IF 
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH 457

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
            +  R++ +SW S+I+G   N    +A+ +    M+   + +  T    L+ACA +  L 
Sbjct: 458 NIP-RKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALM 515

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
            G E+HA  +R  +  D  + +AL+DMY +CGR++ A   F+    ++V SWN +++GY+
Sbjct: 516 CGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYS 574

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
             G G   + LF +M      PD +TF+ +L  CS + +V +G  +F  M   YG+ P L
Sbjct: 575 ERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNL 633

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
           + ++C+VDLLGRAGEL +  +FI KMP+TP+  +W  +L A CR +  K +LG  +A  +
Sbjct: 634 KHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA-CRIH-HKIDLGELSAQHI 691

Query: 759 FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
           FE++ ++   Y+LL N+YA  GKW +VAK R+ MKE  +  +AGCSWV +K  VH F++ 
Sbjct: 692 FELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSD 751

Query: 819 DESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLT 878
           D+ HP+   I   L+   +KM + G    ++ +  D    S++++   HSE+ A+AF L 
Sbjct: 752 DKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLI 811

Query: 879 RN-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
                +PI + KNL +C +CH   KFISK V REI +RD+  FHHF DG+CSCGD
Sbjct: 812 NTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 199/369 (53%), Gaps = 9/369 (2%)

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           V +GN  + M+ + G + D+  VF  M  ++  SWN ++ G  + G ++EA+   C   R
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAM---CLYHR 185

Query: 351 ----DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
                G+    ++    L +C  +  +  G+++H   ++ G + D+ V NAL+++Y   G
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
            +     +F  MP  D +SWN++I  + ++  +  E ++ +  MR     P+ +T  +++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFEN-GMCHEGLELFFAMRGLSVDPDLMTLTSVI 304

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           +A       +LG  +HA VI    A + ++ N+L   Y   G   + EK+F+RM ER+D 
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM-ERKDI 363

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           VSW +MISGY +N L  KA++    M Q   + D  T A VLSACA++  L+ G+E+H  
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
            ++A L   V++ + L++MYSKC  ID A   F  +P +NV SW S+I+G   +    +A
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA 483

Query: 647 LTLFSQMKL 655
           L    QMK+
Sbjct: 484 LIFLRQMKM 492



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 154/566 (27%), Positives = 262/566 (46%), Gaps = 57/566 (10%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           V L N  + ++VR G+L  A  +F +M +RN  SW  +V GY  +G  +EA  ++  M+ 
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLW 188

Query: 80  AGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
            G +  + Y    VLR C   G      G +VH  V++     D  V N LI MY  C +
Sbjct: 189 VGGVKPDVYTFPCVLRTCG--GIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGD 246

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
               AR +F+ +  RD+ISWN++IS Y + G      +LF  M+      S+ P+  T  
Sbjct: 247 -VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMR----GLSVDPDLMTLT 301

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           S+I+A    +L    L + I A V   G   D+ V ++L   +   G++  A K+F +M 
Sbjct: 302 SVISAC--ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME 359

Query: 259 QKNVVSMNGLMEGRR-----------------------------------------KGKE 277
           +K++VS   ++ G                                            G E
Sbjct: 360 RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE 419

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD-QNG 336
           +H   I++ L   V V N L+NMY+KC  ID +  +F  +  K+ +SW ++I+GL   N 
Sbjct: 420 LHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNR 479

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
           C+E  I  F    +  L  +  +L + L++CA +G +M G++IH   L+ G+  D  + N
Sbjct: 480 CFEALI--FLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN 537

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           ALL +Y   G ++     F    + D  SWN ++  +++     S  V+ +  M ++   
Sbjct: 538 ALLDMYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSE-RGQGSMVVELFDRMVKSRVR 595

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P+ +TFI++L   S   M + G    +++  Y V         ++   G+ GE+ +  K 
Sbjct: 596 PDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKF 655

Query: 517 FARMSERRDEVSWNSMISG-YIHNEL 541
             +M    D   W ++++   IH+++
Sbjct: 656 IQKMPVTPDPAVWGALLNACRIHHKI 681



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 196/436 (44%), Gaps = 4/436 (0%)

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           + GL  NG  EEA+    +M+   +       ++ +  C        G +++   L    
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
              V + NA L+++   G L     VF  M E +  SWN ++G +A           Y+ 
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            +   G  P+  TF  +L           G +VH  V++Y    +  + NAL++ Y KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
           ++     +F RM  RRD +SWN+MISGY  N +  + + L + M       D  T  +V+
Sbjct: 246 DVKSARLLFDRMP-RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
           SAC  +     G ++HA  +      D+ + ++L  MY   G    A + F  M  +++ 
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIV 364

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           SW +MISGY  +   DKA+  +  M  D   PD +T   VLSAC+  G +D G +  K +
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK-L 423

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT 748
           +    LI  +   + ++++  +   +DK  +  + +P   N + W +++ A  R N R  
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSII-AGLRLNNRCF 481

Query: 749 ELGRKAANMLFEMEPQ 764
           E       M   ++P 
Sbjct: 482 EALIFLRQMKMTLQPN 497



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 118/473 (24%), Positives = 209/473 (44%), Gaps = 57/473 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H+ ++++G+  D+ + N LI +YV+ GD+ SA  LFD MP R+ +SW  ++SGY  
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFE 274

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            GM +E  ++F  M       +   L SV+ AC+  G    + G  +H  V+ +    D 
Sbjct: 275 NGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDR--RLGRDIHAYVITTGFAVDI 332

Query: 124 LVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            V N L  MY   GS  E    A ++F  +E +D++SW ++IS Y            +  
Sbjct: 333 SVCNSLTQMYLNAGSWRE----AEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRM 388

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M ++    S+KP+E T  ++++A   + L       ++  +  KA L+S + V + L++ 
Sbjct: 389 MDQD----SVKPDEITVAAVLSAC--ATLGDLDTGVELHKLAIKARLISYVIVANNLINM 442

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------- 274
           +++      A  IF  + +KNV+S   ++ G R                           
Sbjct: 443 YSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLT 502

Query: 275 --------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                         GKE+H +++R+G+     + N L++MY +CG ++ + S F     K
Sbjct: 503 AALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KK 561

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D  SWN +++G  + G     +  F  M +  +     + IS L  C+    +  G    
Sbjct: 562 DVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYF 621

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            +    G+  ++     ++ L   AG L    K    MP   D   W +++ A
Sbjct: 622 SKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA 674



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 134/307 (43%), Gaps = 23/307 (7%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           V + N LIN+Y +   +  A  +F  +P +N +SW  I++G        EA    ++M +
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-K 491

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
                N   L + L AC   G      G ++H  VL++    D  + N L+ MY  C   
Sbjct: 492 MTLQPNAITLTAALAACARIG--ALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRC-GR 548

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
            + A   F   + +D+ SWN +++ YS+RG    V +LF RM +   R    P+E TF S
Sbjct: 549 MNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVR----PDEITFIS 603

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKA---GLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           L+        S S +++Q L    K    G+  +L   + +V    R G    A K  ++
Sbjct: 604 LLCGC-----SKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQK 658

Query: 257 M-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDS 310
           M +  +      L+   R   ++  G L    +F++     G    L N+YA CG   + 
Sbjct: 659 MPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREV 718

Query: 311 RSVFRFM 317
             V R M
Sbjct: 719 AKVRRMM 725



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 127/317 (40%), Gaps = 48/317 (15%)

Query: 533 ISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL 592
           + G   N  L +AM L+  M +    +D   F  ++  C      E G +V++  + +  
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
              V +G+A + M+ + G +  A   F  M  RN++SWN ++ GYA+ G+ D+A+ L+ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185

Query: 653 MK-LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRA 711
           M  + G  PD  TF  VL  C     +  G K        YG    ++  + ++ +  + 
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARG-KEVHVHVVRYGYELDIDVVNALITMYVKC 244

Query: 712 GELDKIEEFINKMP----------------------------------ITPNSLIWRTVL 737
           G++       ++MP                                  + P+ +   +V+
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304

Query: 738 GACCRANCRKTELGRKAANMLFEMEPQNAVNYVL---LANMYASGGKWEDVAKARKAMKE 794
            AC     R+  LGR      + +    AV+  +   L  MY + G W +  K    M+ 
Sbjct: 305 SACELLGDRR--LGRDIH--AYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER 360

Query: 795 AEVKKEAGCSWVTMKDG 811
            ++      SW TM  G
Sbjct: 361 KDI-----VSWTTMISG 372


>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Brachypodium distachyon]
          Length = 742

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 246/732 (33%), Positives = 383/732 (52%), Gaps = 72/732 (9%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R+  E+H  L+ SG        + L+N    C T  D   +   +   D +  +T +   
Sbjct: 13  RQAAELHAVLVASGRLLHPPSASHLLNSLVNCFTPTDPLHLRYALCLFDRMPCSTFLFDT 72

Query: 333 DQNGCY------EEAIMNFCAMRRDGLMSSNFSLISTLSSCA-SLGWIMLGQQIHGEGLK 385
               C+      E  ++ +  MRR G+ +  F+       CA     ++L Q +H    +
Sbjct: 73  ALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAACFR 132

Query: 386 LGLDSDVS-VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA------DSEA 438
             L S V  VSN ++ +Y + G      + F  +P  D V+W +VI   A      D+  
Sbjct: 133 TMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWC 192

Query: 439 LV------------------------SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           L+                        +EAV  +  M   G  P+ VT I +L+A +    
Sbjct: 193 LLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKD 252

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS------------- 521
              G  +H  V +  +     +  AL+  Y KCG++    ++F  +              
Sbjct: 253 LVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMID 312

Query: 522 ------------------ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
                             E RD V++NS+I+GYIH   L +A+ L   M +   R D+FT
Sbjct: 313 GYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFT 372

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
             ++L+ACAS+  L +G  +HAC  +  +E D+ +G+AL+DMY KCGR++ AS  F  M 
Sbjct: 373 MVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMS 432

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
           VR+V++W++MI+G A +G G  AL  F  MK+DG  P+ VT++ +L+ACSH+ L+DEG  
Sbjct: 433 VRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRL 492

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
           +F+ M  ++ + P +E + CM+DLLGR+G LD+  + +  MP+ PN++IW ++L A CR 
Sbjct: 493 YFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSA-CRV 551

Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
           + +   L R AA  L ++EP     YV L N+Y    +WED ++ R+ M+E  VKK AG 
Sbjct: 552 H-KDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGY 610

Query: 804 SWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDL 863
           S +T+   VH F+  D +HP+   I   ++E+ ++++  GY P T     D++ E KE  
Sbjct: 611 SSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSPITSQITVDVDEEEKEHA 670

Query: 864 VSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHH 922
           +  HSEKIA+AF +++    LP+ I+KNLRVC DCHSA K IS+I  REI++RD +RFHH
Sbjct: 671 LLAHSEKIAIAFGLISLAPNLPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRSRFHH 730

Query: 923 FNDGKCSCGDYW 934
           F DG CSC D+W
Sbjct: 731 FRDGTCSCNDFW 742



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 126/525 (24%), Positives = 238/525 (45%), Gaps = 24/525 (4%)

Query: 22  LCNTLINVYVRVGDL--ASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           L N+L+N +     L    A  LFD MP    +    + + +           +++ M R
Sbjct: 37  LLNSLVNCFTPTDPLHLRYALCLFDRMPCSTFLFDTALRACFRASSGPESPLILYRRMRR 96

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN-QTFDGLVSNVLIAMYGSCLE 138
            G   + +    + + C   G +       +H    ++   +   LVSN +I MY     
Sbjct: 97  TGVCTDAFTFHFLFKCCAR-GRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGL 155

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
           + D ARR F++I  +D ++W ++IS  ++ G     + L         R+S   N  ++ 
Sbjct: 156 AGD-ARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCL--------LRHSPARNVISWT 206

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
            LI+  YS     +  +    +M+   G+  D      L+S  A+L +  + R + + + 
Sbjct: 207 GLIS-GYSRAGRAAEAVDCFNSMLSD-GIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVG 264

Query: 259 QKNVVSMNGLMEGRRKGKEVHGYLIRS-GLFDMVAVG------NGLVNMYAKCGTIDDSR 311
           +K ++    L+          G + R+  +FD +  G      N +++ Y K G +D +R
Sbjct: 265 EKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVAR 324

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
            +F  M  +D V++N++I+G    G   EA++ F  MRR  L + NF+++S L++CASLG
Sbjct: 325 YLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLG 384

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
            +  G+ +H    +  ++ D+ +  ALL +Y   G +     VF  M   D  +W+++I 
Sbjct: 385 ALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIA 444

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-IKYNV 490
             A    +   A++Y+  M+  G+ PN VT+I IL A S   +   G     ++ + +N+
Sbjct: 445 GLA-FNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNI 503

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
                    ++   G+ G +D+   +   M  + + V W S++S 
Sbjct: 504 RPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSA 548



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 39/284 (13%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D     T+I+   ++G L  A  L    P RN +SW  ++SGY+  G + EA   F  M+
Sbjct: 170 DAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSML 229

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC-- 136
             G   +   +  +L AC +       FG  +H LV +      G +   LI MY  C  
Sbjct: 230 SDGIEPDEVTVIGLLSACAQL--KDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGD 287

Query: 137 -----------------------------LESTDCARRIFEEIETRDLISWNSIISVYSQ 167
                                        L   D AR +F+++E RDL+++NS+I+ Y  
Sbjct: 288 IGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIH 347

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
            G       LF +M+    R+ L+ + +T  SL+TA  S  L      + + A +++  +
Sbjct: 348 GGRLREALLLFMQMR----RHDLRADNFTMVSLLTACAS--LGALPQGRALHACIEQRLV 401

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
             D+Y+G+AL+  + + G    A  +F+ M  ++V + + ++ G
Sbjct: 402 EVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAG 445



 Score = 46.2 bits (108), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H  I +     D++L   L+++Y++ G +  AS +F  M  R+  +W+ +++G    
Sbjct: 390 RALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFN 449

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRAC 96
           GM   A + F  M   GF  N     ++L AC
Sbjct: 450 GMGKAALEYFFWMKVDGFQPNSVTYIAILTAC 481


>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 580

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/579 (38%), Positives = 342/579 (59%), Gaps = 10/579 (1%)

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL--SLYADAGYLSRCLKVFF 416
           SL++ +  C  +G +   + I    ++  L  D  +++ L+  S    +G+++   ++F 
Sbjct: 9   SLVAAIKRCTRVGDL---KAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFS 65

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
                +   WN++I  ++ S++ ++ A+  Y DM   G SPN  TF  +L A        
Sbjct: 66  CTHHPNLFMWNTIIRGYSISDSPIT-AIALYRDMFLCGISPNSYTFGFVLKACCKLLRLC 124

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY 536
            G ++H+Q++K  +  ET + N L+  Y  CG MD    +F  M E  D  SW++M+SGY
Sbjct: 125 EGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEP-DSASWSTMVSGY 183

Query: 537 IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
             N    +A+ L   M       D FT A+V+  C  +  L+ G  VH+   +  ++ DV
Sbjct: 184 AQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDV 243

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
           V+G+ALV MYSKCG +D A + F  M  R+V +W++MI+GYA HGHG+KAL LF  MK  
Sbjct: 244 VLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRS 303

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
             +P+ VTF  VLSACSH+GLV++G + F++M   Y + PQ++ + CMVDL  RAG +  
Sbjct: 304 KTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGH 363

Query: 717 IEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMY 776
             +FI  MPI PN ++WRT+LGAC     +  +LG   +  + +++P +  NYVL++N+Y
Sbjct: 364 AHKFIQTMPIEPNVVLWRTLLGACKTHGYK--DLGEHISRKILKLDPSSPENYVLVSNVY 421

Query: 777 ASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELN 836
           AS G+W  V + R  MK+   KK+ G S + +   VH F+ GDESHPE++ IY  L ++ 
Sbjct: 422 ASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMA 481

Query: 837 QKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCG 895
           +K++  G+V  T   L D++ E KE  +  HSE++A+A+ +L   +  PIRI+KNLRVC 
Sbjct: 482 RKLKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRVCR 541

Query: 896 DCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           DCH   K IS++  REI++RD  RFHHF +  CSC DYW
Sbjct: 542 DCHEVIKLISEVYNREIIVRDRVRFHHFRERGCSCNDYW 580



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 190/396 (47%), Gaps = 7/396 (1%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKC--GTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           K +  +++R+ L     + + L+   A    G +  +  +F      +   WNT+I G  
Sbjct: 24  KAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLFMWNTIIRGYS 83

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            +     AI  +  M   G+  ++++    L +C  L  +  GQ++H + +K+GLD +  
Sbjct: 84  ISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETP 143

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           + N L+ LYA  G +     +F  MPE D  SW++++  +A +   V EA+K + +M+  
Sbjct: 144 LVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAV-EALKLFREMQAE 202

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
             S +  T  +++          LG  VH+ + K  V  +  +  AL+  Y KCG +D+ 
Sbjct: 203 NVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNA 262

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            K+F  M+E RD  +W++MI+GY  +    KA+ L   M +     +  TF +VLSAC+ 
Sbjct: 263 LKVFQGMAE-RDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSH 321

Query: 574 VATLERGMEV-HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWN 631
              +E+G ++         +   +     +VD++ + G + +A +F   MP+  NV  W 
Sbjct: 322 SGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWR 381

Query: 632 SMISGYARHGHGDKALTLFSQ-MKLDGPLPDHVTFV 666
           +++     HG+ D    +  + +KLD   P++   V
Sbjct: 382 TLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLV 417



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 171/380 (45%), Gaps = 47/380 (12%)

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV--SGFARLGNFYYARKIFE 255
           GSL+ A       G   L+ I A + +A L  D ++ S L+  S     G+  YA +IF 
Sbjct: 8   GSLVAAIKRCTRVGD--LKAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFS 65

Query: 256 QMIQKNVVSMNGLMEGRR-----------------------------------------K 274
                N+   N ++ G                                           +
Sbjct: 66  CTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCE 125

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+E+H  +++ GL     + NGL+ +YA CG +D +  +F  M   DS SW+TM+SG  Q
Sbjct: 126 GQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQ 185

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG   EA+  F  M+ + + S  F+L S +  C  LG + LG+ +H    K G+  DV +
Sbjct: 186 NGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVL 245

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             AL+ +Y+  G L   LKVF  M E D  +W+++I  +A       +A++ +  M+R+ 
Sbjct: 246 GTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYA-IHGHGEKALQLFDAMKRSK 304

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQV-IKYNVANETTIENALLSCYGKCGEMDDC 513
             PN VTF ++L+A S   + + GHQ+   +  +Y +  +      ++  + + G +   
Sbjct: 305 TIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHA 364

Query: 514 EKIFARMSERRDEVSWNSMI 533
            K    M    + V W +++
Sbjct: 365 HKFIQTMPIEPNVVLWRTLL 384



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 174/389 (44%), Gaps = 56/389 (14%)

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES-TDCARRIFE 148
           GS++ A + C   G    +Q H  ++++N T D  +++ LI      L      A RIF 
Sbjct: 8   GSLVAAIKRCTRVGDLKAIQAH--MVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFS 65

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS-- 206
                +L  WN+II  YS     I+   L+    R+ F   + PN YTFG ++ A     
Sbjct: 66  CTHHPNLFMWNTIIRGYSISDSPITAIALY----RDMFLCGISPNSYTFGFVLKACCKLL 121

Query: 207 SVLSGSYLLQQILAMVKKAGL---------LSDLYVG----------------------S 235
            +  G  L  QI+    K GL         L  LY                        S
Sbjct: 122 RLCEGQELHSQIV----KVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWS 177

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNV----------VSMNGLMEGRRKGKEVHGYLIRS 285
            +VSG+A+ G    A K+F +M  +NV          V + G +     GK VH Y+ + 
Sbjct: 178 TMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKE 237

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
           G+   V +G  LV MY+KCG++D++  VF+ M  +D  +W+TMI+G   +G  E+A+  F
Sbjct: 238 GVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLF 297

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI-HGEGLKLGLDSDVSVSNALLSLYAD 404
            AM+R   + +  +  S LS+C+  G +  G QI      +  +   +     ++ L+  
Sbjct: 298 DAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCR 357

Query: 405 AGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           AG +    K    MP E + V W +++GA
Sbjct: 358 AGMVGHAHKFIQTMPIEPNVVLWRTLLGA 386



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 136/288 (47%), Gaps = 29/288 (10%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H QI+K G  ++  L N LI +Y   G +  A  +FDEMP+ +S SW+ +VSGY 
Sbjct: 125 EGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYA 184

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G + EA K+F+EM       + + L SV+  C + G      G  VH  + K     D
Sbjct: 185 QNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLG--ALDLGKWVHSYMDKEGVKID 242

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            ++   L+ MY  C  S D A ++F+ +  RD+ +W+++I+ Y+  G      +LF  M+
Sbjct: 243 VVLGTALVGMYSKC-GSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMK 301

Query: 183 REGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQ------QILAMVKKAGLLSDLYVG 234
           R        PN  TF S+++A   S  V  G  + +      +I   +K  G + DL   
Sbjct: 302 RS----KTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDL--- 354

Query: 235 SALVSGFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVHGY 281
                 F R G   +A K  + M I+ NVV    L+   +     HGY
Sbjct: 355 ------FCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACK----THGY 392



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/454 (24%), Positives = 195/454 (42%), Gaps = 51/454 (11%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLI--NVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           D K     +++     D FL + LI  +     G +A A ++F      N   W  I+ G
Sbjct: 22  DLKAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLFMWNTIIRG 81

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y+       A  ++++M   G   N Y  G VL+AC  C       G ++H  ++K    
Sbjct: 82  YSISDSPITAIALYRDMFLCGISPNSYTFGFVLKAC--CKLLRLCEGQELHSQIVKVGLD 139

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
           F+  + N LI +Y +C    D A  +F+E+   D  SW++++S Y+Q G  +   KLF  
Sbjct: 140 FETPLVNGLIKLYAAC-GCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFRE 198

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           MQ E    ++  + +T  S++       L    L + + + + K G+  D+ +G+ALV  
Sbjct: 199 MQAE----NVSSDAFTLASVVGVCGD--LGALDLGKWVHSYMDKEGVKIDVVLGTALVGM 252

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------RKGKEVHGYLIRSGLFDMVAVG 294
           +++ G+   A K+F+ M +++V + + ++ G        K  ++   + RS         
Sbjct: 253 YSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTF 312

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
             +++  +  G ++    +F  M  +  ++       +   GC  +    FC   R G++
Sbjct: 313 TSVLSACSHSGLVEKGHQIFETMWTEYKIT-----PQIKHYGCMVDL---FC---RAGMV 361

Query: 355 SSNFSLIST-------------LSSCASLGWIMLGQQIHGEGLKLGLDSD---VSVSNAL 398
                 I T             L +C + G+  LG+ I  + LKL   S    V VSN  
Sbjct: 362 GHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSN-- 419

Query: 399 LSLYADAGYLSRCLKVFFLMPE---HDQVSWNSV 429
             +YA  G  S   +V  LM +     Q  W+S+
Sbjct: 420 --VYASLGRWSSVCQVRSLMKDKAPKKQHGWSSI 451


>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
 gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
 gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 219/592 (36%), Positives = 345/592 (58%), Gaps = 7/592 (1%)

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
           N   + RD  +   F+L   L  CA    +++G+  HG  +  GL +D    N L++LY 
Sbjct: 45  NLVRVERD--LIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYT 102

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
             G      +VF  M     +SWN++I  +  +   V EA+K +  M R G      T  
Sbjct: 103 KCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDV-EALKLFSRMHREGTQMTEFTLS 161

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           + L A ++        Q+H   IK  + + + +  A L  Y KC  + D   +F  M E+
Sbjct: 162 STLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEK 221

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
              V+W+S+ +G++ N L  + + L     + G +L  FT +++LS CAS+A +  G +V
Sbjct: 222 -TSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQV 280

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           HA  V+     ++ + ++LVD+Y+KCG+I+ +   F  M  +NV  WN+MI+ ++RH H 
Sbjct: 281 HAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHS 340

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC 703
            +A+ LF +M+  G  P+ VT++ +LSACSH GLV+EG  +F  +       P +  +SC
Sbjct: 341 WEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSC 400

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP 763
           MVD+LGR+G+ D+  + ++KMP  P + +W ++LG+  R + +   L R AA  LF +EP
Sbjct: 401 MVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGS-SRIH-KNIRLARIAAEQLFRLEP 458

Query: 764 QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHP 823
           +N  N+VLL+N+YA+ G WE+V  ARK ++++  KKE G SW+  K  +HVFVAG+  HP
Sbjct: 459 ENGGNHVLLSNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHP 518

Query: 824 EKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSK 882
               +Y KL+E+  +MR   +   T+  L D+  + KE+L+ +HSEK+A AF +++    
Sbjct: 519 GITDVYNKLEEIYHEMRKISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPN 578

Query: 883 LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +PI I KNLR+CGDCHS  K +S I  R++++RD NRFHHF DG CSCGD+W
Sbjct: 579 IPITIYKNLRICGDCHSFMKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 182/368 (49%), Gaps = 4/368 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK  HG  I  GL       N L+N+Y KCG  D +R VF  M  +  +SWNTMI+G   
Sbjct: 75  GKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTH 134

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N    EA+  F  M R+G   + F+L STL +CA+   I+  +Q+H   +KL LDS   V
Sbjct: 135 NREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFV 194

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             A L +YA    +     VF  MPE   V+W+S+   F  +  L  E +  +   +R G
Sbjct: 195 GTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQN-GLHEEVLCLFQSTQREG 253

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
                 T  +IL+  +S ++   G QVHA ++K+       +  +L+  Y KCG+++   
Sbjct: 254 MQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSY 313

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           ++FA M E ++ V WN+MI+ +  +    +AM L   M Q G   +  T+ ++LSAC+  
Sbjct: 314 EVFADM-EEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHT 372

Query: 575 ATLERGMEVHACGVR-ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNS 632
             +E G       +     E +V+  S +VD+  + G+ D A +  D MP     S W S
Sbjct: 373 GLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGS 432

Query: 633 MISGYARH 640
           ++     H
Sbjct: 433 LLGSSRIH 440



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 177/400 (44%), Gaps = 66/400 (16%)

Query: 83  LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC 142
           L++ + L  +L+ C +        G   H L +      D +  N+LI +Y  C ++ DC
Sbjct: 53  LIDVFTLHELLQLCAK--RRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQN-DC 109

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           ARR+F+ +  R +ISWN++I+ Y+   + +   KLFSRM REG + +    E+T  S + 
Sbjct: 110 ARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMT----EFTLSSTLC 165

Query: 203 AAYSSVLSGSYLL---QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           A      +  Y +   +Q+  +  K  L S  +VG+A +  +A+      A  +FE M +
Sbjct: 166 AC-----AAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPE 220

Query: 260 KNVVSMNGLMEG-----------------RRKG------------------------KEV 278
           K  V+ + L  G                 +R+G                         +V
Sbjct: 221 KTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQV 280

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H  +++ G    + V   LV++YAKCG I+ S  VF  M  K+ V WN MI+   ++   
Sbjct: 281 HAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHS 340

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
            EA++ F  M++ G+  +  + +S LS+C+  G +  G+        L L    +  N L
Sbjct: 341 WEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHY----FNLLLSDRTAEPNVL 396

Query: 399 -----LSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
                + +   +G      K+   MP     S W S++G+
Sbjct: 397 HYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGS 436



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 160/344 (46%), Gaps = 32/344 (9%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G   D   CN LIN+Y + G    A ++FD M  R+ +SW  +++GYTH     EA K+F
Sbjct: 86  GLVTDTVTCNILINLYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLF 145

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGM----QVHCLVLKSNQTFDGLVSNVLI 130
             M R G  +  + L S L AC        K+ +    Q+H + +K        V    +
Sbjct: 146 SRMHREGTQMTEFTLSSTLCAC------AAKYAIIECKQLHTIAIKLALDSSSFVGTAFL 199

Query: 131 AMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSL 190
            +Y  C    D A  +FE +  +  ++W+S+ + + Q G    V  LF   QREG + + 
Sbjct: 200 DVYAKCNMIKD-ACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLT- 257

Query: 191 KPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
              E+T  S+++  A+ + ++ G+    Q+ A++ K G   +L+V ++LV  +A+ G   
Sbjct: 258 ---EFTVSSILSTCASLALIIEGT----QVHAVIVKHGFHRNLFVATSLVDVYAKCGQIE 310

Query: 249 YARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLI------RSGLFDMVAVGNGLVNMYA 302
            + ++F  M +KNVV  N ++    +       +I      + G+F        +++  +
Sbjct: 311 KSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACS 370

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNT-----MISGLDQNGCYEEA 341
             G +++ R  F  ++   +   N      M+  L ++G  +EA
Sbjct: 371 HTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEA 414



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 145/315 (46%), Gaps = 18/315 (5%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H   +K       F+    ++VY +   +  A  +F+ MP++ SV+W+ + +G+ 
Sbjct: 175 ECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFV 234

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G+  E   +F+   R G  L  + + S+L  C          G QVH +++K     +
Sbjct: 235 QNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLAL--IIEGTQVHAVIVKHGFHRN 292

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V+  L+ +Y  C +  + +  +F ++E ++++ WN++I+ +S+   +     LF +MQ
Sbjct: 293 LFVATSLVDVYAKCGQ-IEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQ 351

Query: 183 REGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           + G    + PNE T+ S+++A   +  V  G +    +L+   +    + L+  S +V  
Sbjct: 352 QVG----IFPNEVTYLSILSACSHTGLVEEGRHYFNLLLS--DRTAEPNVLHY-SCMVDV 404

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNG-LMEGRRKGKEVHGYLIRSGLFDMVAVGNG--- 296
             R G    A K+ ++M  +   SM G L+   R  K +    I +     +   NG   
Sbjct: 405 LGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNH 464

Query: 297 --LVNMYAKCGTIDD 309
             L N+YA  G  ++
Sbjct: 465 VLLSNVYAASGNWEN 479


>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 237/663 (35%), Positives = 381/663 (57%), Gaps = 17/663 (2%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYA--KCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +++H + +++ +F+   V + L+ +Y+  K   +  +RS+F  +  +  + WNT+I    
Sbjct: 30  EQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYV 89

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           +N    + I+ F  +  + L   NF+L   +  CA LG +  G+QIHG  LK+G  SDV 
Sbjct: 90  ENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVF 148

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V  +L+++Y+  G +    KVF  M + D V WNS+I  +A     +  A++ + +M   
Sbjct: 149 VQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARC-GEIDIALQLFEEMPER 207

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
               +  ++  ++   S     +   ++  Q+   N+ +     NA+++ Y K G+ D  
Sbjct: 208 ----DAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVS----WNAMINGYMKSGDFDSA 259

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            ++F +M    D V+WN MI+GY  N     A+ + + M++ G R  H T  +VLSA + 
Sbjct: 260 LELFYQMP-IWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSG 318

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           +A L +G  +H+   +   E D ++G++L++MY+KCG I+ A   F  +  + V  W ++
Sbjct: 319 LAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAI 378

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I G   HG  + AL LF +M   G  P+ + F+GVL+AC+HAGLVD+G ++F  M   Y 
Sbjct: 379 IVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYK 438

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           + P LE + C+VD+L RAG L++ +  I  MPI+PN +IW ++LG     N  K ++G  
Sbjct: 439 IEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGG--SRNHGKIDIGEY 496

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
           AA  + E+ P+    Y+LL+NMYA+ G WE V+  R+ M +   +K+ GCS V  K  +H
Sbjct: 497 AAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLH 556

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPE-SKEDLVSYHSEKIA 872
            F+ GD SHP+   IY K+ E+ +K++  G+VP T   L  +E E  KE  +  HSE++A
Sbjct: 557 EFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLA 616

Query: 873 VAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
           +AF ++     +PIRIMKNLRVC DCHS  K +SKI  REI++RD+ RFHHF +G CSC 
Sbjct: 617 IAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCM 676

Query: 932 DYW 934
           DYW
Sbjct: 677 DYW 679



 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 235/541 (43%), Gaps = 88/541 (16%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVY--VRVGDLASASKLFDEMPDRNSVSWACIV 58
            ++ +  H   LK       F+ + L+ +Y   ++ DL  A  +FD +  R+ + W  I+
Sbjct: 26  PQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTII 85

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
             Y     S++   +F E+V   +L + + L  V++ C   G    + G Q+H L LK  
Sbjct: 86  KCYVENQFSHDGIVLFHELVHE-YLPDNFTLPCVIKGCARLGV--VQEGKQIHGLALKIG 142

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              D  V   L+ MY  C E  DCAR++F+ +  +D++ WNS+I  Y++ G+     +LF
Sbjct: 143 FGSDVFVQGSLVNMYSKCGE-IDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLF 201

Query: 179 SRM-QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
             M +R+ F +++                                              L
Sbjct: 202 EEMPERDAFSWTV----------------------------------------------L 215

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGL 297
           V G ++ G    ARK+F+QM  +N+VS N ++ G                          
Sbjct: 216 VDGLSKCGKVESARKLFDQMPCRNLVSWNAMING-------------------------- 249

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
              Y K G  D +  +F  M   D V+WN MI+G + NG + +A+  F  M + G   S+
Sbjct: 250 ---YMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSH 306

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
            +L+S LS+ + L  +  G+ IH    K G + D  +  +L+ +YA  G +   L VF  
Sbjct: 307 ATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRA 366

Query: 418 MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
           + +     W ++I        + + A+  +L+M + G  PN + FI +L A +   +   
Sbjct: 367 IQKKKVGHWTAIIVGLG-IHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDD 425

Query: 478 GHQVHAQVI-KYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           G Q    ++ +Y +  E T+E+   L+    + G +++ +     M    ++V W S++ 
Sbjct: 426 GRQYFDMMMNEYKI--EPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLG 483

Query: 535 G 535
           G
Sbjct: 484 G 484



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 141/558 (25%), Positives = 232/558 (41%), Gaps = 101/558 (18%)

Query: 99  CGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC-LESTDCARRIFEEIETRDLIS 157
           C P   +   Q+H   LK+       VS+ L+A+Y    +     AR IF+ I+ R LI 
Sbjct: 24  CAPQEVE---QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIH 80

Query: 158 WNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ 217
           WN+II  Y +   +     LF  +  E       P+ +T                     
Sbjct: 81  WNTIIKCYVENQFSHDGIVLFHELVHEYL-----PDNFTL-------------------- 115

Query: 218 ILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE 277
                              ++ G ARLG                VV         ++GK+
Sbjct: 116 -----------------PCVIKGCARLG----------------VV---------QEGKQ 133

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +HG  ++ G    V V   LVNMY+KCG ID +R VF  MI KD V WN++I G  + G 
Sbjct: 134 IHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGE 193

Query: 338 YEEAIMNFCAM-RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS----DV 392
            + A+  F  M  RD    S   L+  LS C  +           E  +   D     ++
Sbjct: 194 IDIALQLFEEMPERDAF--SWTVLVDGLSKCGKV-----------ESARKLFDQMPCRNL 240

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
              NA+++ Y  +G     L++F+ MP  D V+WN +I  + +      +AVK +  M +
Sbjct: 241 VSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGY-ELNGQFMDAVKMFFMMLK 299

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G  P+  T +++L+A S  ++   G  +H+ + K     +  +  +L+  Y KCG ++ 
Sbjct: 300 LGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIES 359

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
              +F R  +++    W ++I G   + +   A+ L   M + G + +   F  VL+AC 
Sbjct: 360 ALTVF-RAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACN 418

Query: 573 SVATLERG-----MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-N 626
               ++ G     M ++   +   LE        LVD+  + G ++ A    + MP+  N
Sbjct: 419 HAGLVDDGRQYFDMMMNEYKIEPTLEHY----GCLVDILCRAGHLEEAKNTIENMPISPN 474

Query: 627 VYSWNSMISGYARHGHGD 644
              W S++ G   HG  D
Sbjct: 475 KVIWMSLLGGSRNHGKID 492


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 262/777 (33%), Positives = 406/777 (52%), Gaps = 56/777 (7%)

Query: 169 GDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKA--- 225
           GDT S  KLF +M         K N  T+ SLI+  Y  + +    L +++ +  KA   
Sbjct: 15  GDTRSADKLFDKMS--------KSNIVTYNSLISG-YVQMSN----LDKVMILFDKARRL 61

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS 285
           GL  D Y  +  ++  ++ GN                            GK +HG ++  
Sbjct: 62  GLKLDKYNCAGALTACSQSGNL-------------------------SAGKMIHGLILVY 96

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
           GL   V + N L++MY+KCG +D +R +F      D VSWN++I+G  QNG YEE +   
Sbjct: 97  GLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTIL 156

Query: 346 CAMRRDGLMSSNFSLISTLSSCASL--GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
             M ++GL  + ++L S L +C+S   G  M G  +H   +KLGL  DV V  ALL +YA
Sbjct: 157 QKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYA 216

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL----VSEAVKYYLDMRRAGWSPNG 459
             G L   +++F  M + + V +N+++      E +      +A+  + +M+  G  P+ 
Sbjct: 217 KTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSM 276

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
            T+ ++L A       K   QVHA + K  + ++  I + L+  Y   G M D    F  
Sbjct: 277 FTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNS 336

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           +      V   +MI GY+ N     A++L + ++   ++ D F F+T++S+CA++  L  
Sbjct: 337 I-HNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRS 395

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G ++     +  +    +  ++ + MY+K G +  A+  F  M   ++ SW++MI   A+
Sbjct: 396 GEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQ 455

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
           HGH  +AL  F  MK  G  P+H  F+GVL ACSH GLV+EG ++F +M + Y +   ++
Sbjct: 456 HGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVK 515

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
              C+VDLLGRAG L   E  I ++      ++WR +L A CR + + T   ++ A  + 
Sbjct: 516 HCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSA-CRIH-KDTVTAQRVAQKVI 573

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           E+EP  + +YVLL N+Y   G     +K R  M+E  +KKE G SW+ + D V+ FV+GD
Sbjct: 574 ELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGD 633

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFAL-FDLEPESKEDLVSYHSEKIAVAF-VL 877
            SH     IY KL E+   +     +   K  L + +E E   + V+YHSEK+AVAF VL
Sbjct: 634 RSHKNSGQIYAKLDEM---LATTKRLDSAKDILGYKIEHEHLTN-VNYHSEKLAVAFGVL 689

Query: 878 TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             +   P+R+MKNLR+C DCH   K  S +  RE+++RDS RFHHF DG CSCGDYW
Sbjct: 690 YLSESAPVRVMKNLRICLDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGSCSCGDYW 746



 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 147/552 (26%), Positives = 247/552 (44%), Gaps = 57/552 (10%)

Query: 32  RVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGS 91
           + GD  SA KLFD+M   N V++  ++SGY      ++   +F +  R G  L++Y    
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72

Query: 92  VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE 151
            L AC + G      G  +H L+L        +++N LI MY  C +  D AR +F+  +
Sbjct: 73  ALTACSQSG--NLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQ-VDYARILFDHSD 129

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
             D +SWNS+I+ Y Q G    +  +  +M + G  +    N YT GS + A  SS  +G
Sbjct: 130 KLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAF----NTYTLGSALKAC-SSNFNG 184

Query: 212 SYLLQQILA-MVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
             +   +L     K GL  D+ VG+AL+  +A+ G+   A +IF+QM+ KNVV  N +M 
Sbjct: 185 CKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMA 244

Query: 271 GRRK----------------------------------------------GKEVHGYLIR 284
           G  +                                               K+VH  + +
Sbjct: 245 GLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCK 304

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
           +GL     +G+ L+++Y+  G++ D+   F  +     V    MI G  QNG +E A+  
Sbjct: 305 NGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSL 364

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F  +         F   + +SSCA++G +  G+QI G   K+G+       N+ + +YA 
Sbjct: 365 FYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAK 424

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
           +G L      F  M   D VSW+++I + A       EA++++  M+  G  PN   F+ 
Sbjct: 425 SGDLYAANLTFQQMENPDIVSWSTMICSNA-QHGHAMEALRFFELMKSCGIEPNHFAFLG 483

Query: 465 ILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           +L A S   + + G +    + K Y +         ++   G+ G + D E +  R+   
Sbjct: 484 VLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFE 543

Query: 524 RDEVSWNSMISG 535
            + V W +++S 
Sbjct: 544 HEPVMWRALLSA 555



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 196/386 (50%), Gaps = 9/386 (2%)

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIS 362
           KCG    +  +F  M   + V++N++ISG  Q    ++ ++ F   RR GL    ++   
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
            L++C+  G +  G+ IHG  L  GL S V ++N+L+ +Y+  G +     +F    + D
Sbjct: 73  ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS-FSMGKL-GHQ 480
            VSWNS+I  +  +     E +     M + G + N  T  + L A SS F+  K+ G  
Sbjct: 133 GVSWNSLIAGYVQN-GKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTM 191

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +H   IK  +  +  +  ALL  Y K G +DD  +IF +M + ++ V +N+M++G +  E
Sbjct: 192 LHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVD-KNVVMYNAMMAGLLQQE 250

Query: 541 LLP-----KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
            +      KA+NL + M   G +   FT++++L AC  V   +   +VHA   +  L  D
Sbjct: 251 TIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSD 310

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
             IGS L+D+YS  G +  A   F+ +    +    +MI GY ++G  + AL+LF ++  
Sbjct: 311 EYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLT 370

Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEG 681
               PD   F  ++S+C++ G++  G
Sbjct: 371 YEEKPDEFIFSTIMSSCANMGMLRSG 396



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 213/482 (44%), Gaps = 65/482 (13%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K+ H  IL +G    V L N+LI++Y + G +  A  LFD     + VSW  +++GY  
Sbjct: 86  GKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQ 145

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   E   + ++M + G   N Y LGS L+AC         FG  +H   +K     D 
Sbjct: 146 NGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDV 205

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTIS------VFKL 177
           +V   L+ MY     S D A +IF+++  ++++ +N++++   Q+ +TI          L
Sbjct: 206 VVGTALLDMYAKT-GSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQ-ETIEDKCAYKALNL 263

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F  M+  G    +KP+ +T+ SL+ A    ++      +Q+ A++ K GLLSD Y+GS L
Sbjct: 264 FFEMKSCG----IKPSMFTYSSLLKACI--IVEDFKFAKQVHALMCKNGLLSDEYIGSIL 317

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------- 272
           +  ++ LG+   A   F  +    +V M  ++ G                          
Sbjct: 318 IDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDE 377

Query: 273 ----------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                           R G+++ G+  + G+       N  + MYAK G +  +   F+ 
Sbjct: 378 FIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQ 437

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M   D VSW+TMI    Q+G   EA+  F  M+  G+  ++F+ +  L +C+  G +  G
Sbjct: 438 MENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEG 497

Query: 377 QQIHGE-----GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI 430
            +          +KL +   V V    + L   AG L+    +   +  EH+ V W +++
Sbjct: 498 LRYFDTMEKDYKMKLHVKHCVCV----VDLLGRAGRLADAESLILRLGFEHEPVMWRALL 553

Query: 431 GA 432
            A
Sbjct: 554 SA 555



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 111/498 (22%), Positives = 208/498 (41%), Gaps = 64/498 (12%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           + H   +K G   DV +   L+++Y + G L  A ++FD+M D+N V +  +++G   + 
Sbjct: 191 MLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQE 250

Query: 66  MSNEAC-----KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
              + C      +F EM   G   + +   S+L+AC       FKF  QVH L+ K+   
Sbjct: 251 TIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKAC--IIVEDFKFAKQVHALMCKNGLL 308

Query: 121 FDGLVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
            D  + ++LI +Y   GS +++  C    F  I    ++   ++I  Y Q G+  S   L
Sbjct: 309 SDEYIGSILIDLYSVLGSMMDALLC----FNSIHNLTIVPMTAMIFGYLQNGEFESALSL 364

Query: 178 FSRMQREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS 235
           F     E   Y  KP+E+ F ++++  A    + SG    +QI     K G+       +
Sbjct: 365 F----YELLTYEEKPDEFIFSTIMSSCANMGMLRSG----EQIQGHATKVGISRFTIFQN 416

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN 295
           + +  +A+ G+ Y A   F+QM   ++VS + ++    +    HG+ + +  F       
Sbjct: 417 SQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQ----HGHAMEALRF------- 465

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMS 355
               +   CG            I  +  ++  ++      G  EE +  F  M +D    
Sbjct: 466 --FELMKSCG------------IEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKD---- 507

Query: 356 SNFSLISTLSSCASLGWIM--LGQQIHGEG--LKLGLDSDVSVSNALLS---LYADAGYL 408
             + +   +  C  +  ++   G+    E   L+LG + +  +  ALLS   ++ D    
Sbjct: 508 --YKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTA 565

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADS-EALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
            R  +    +      S+  +   + D+   L +  V+  ++ RR    P G+++I I  
Sbjct: 566 QRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEP-GLSWIQIGD 624

Query: 468 AASSFSMGKLGHQVHAQV 485
              SF  G   H+   Q+
Sbjct: 625 KVYSFVSGDRSHKNSGQI 642



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 96/211 (45%), Gaps = 12/211 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K AK  H  + K+G   D ++ + LI++Y  +G +  A   F+ + +   V    ++ GY
Sbjct: 293 KFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGY 352

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G    A  +F E++      + +   +++ +C   G    + G Q+     K   + 
Sbjct: 353 LQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGM--LRSGEQIQGHATKVGISR 410

Query: 122 DGLVSNVLIAMYGSCLESTD--CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             +  N  I MY    +S D   A   F+++E  D++SW+++I   +Q G  +   + F 
Sbjct: 411 FTIFQNSQIWMYA---KSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFE 467

Query: 180 RMQREGFRYSLKPNEYTF-GSLITAAYSSVL 209
            M+  G    ++PN + F G LI  ++  ++
Sbjct: 468 LMKSCG----IEPNHFAFLGVLIACSHRGLV 494


>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 249/757 (32%), Positives = 396/757 (52%), Gaps = 45/757 (5%)

Query: 220 AMVKKAGLLSDLYVGSALVSGFARLG-----NFYYARKIFEQMIQKNVVSMNGLMEGRRK 274
           A  +  G    LY  + L+ G+A  G      F Y   I    I  +  +   L+    K
Sbjct: 75  AFKEDEGTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSK 134

Query: 275 ------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
                 G +VHG +++ GL   + V N L++ YA CG +D  R VF  M+ ++ VSW ++
Sbjct: 135 IMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSL 194

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           I+G       +EA+  F  M   G+  +  +++  +S+CA L  + LG+++     +LG+
Sbjct: 195 INGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGV 254

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
            S+  V NALL +Y   G +    ++F    + + V +N+++  +     L  E +    
Sbjct: 255 KSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYV-QHGLAGEVLVVLD 313

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
           +M + G  P+ VT ++ +AA +      +G   HA V +  +     I NA++  Y KCG
Sbjct: 314 EMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCG 373

Query: 509 EMDDCEKIFARMSER-------------RDE-----------------VSWNSMISGYIH 538
           + +   K+F  MS +             RD                  VSWN+MI   + 
Sbjct: 374 KREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQ 433

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
             +  +A++L+  M  +G + D  T   + SAC  +  L+    ++    +  +  D+ +
Sbjct: 434 ASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQL 493

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
           G+ALVDM+S+CG    A R F+ M  R+V +W + I   A  G+   A+ LF +M     
Sbjct: 494 GTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDV 553

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
             D   FV +L+A SH G VD+G + F +M +++G+ PQ+  + CMVDLLGRAG L++  
Sbjct: 554 KADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAF 613

Query: 719 EFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYAS 778
           + +  MPI PN +IW + L AC +   +  E    A   + ++ P+    +VLL+N+YAS
Sbjct: 614 DLMKSMPIKPNDVIWGSFLAACRKH--KNVEFANYADEKITQLAPEKVGIHVLLSNIYAS 671

Query: 779 GGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQK 838
            GKW DVA+ R  MKE   +K AG S + +   +  F +GDESH E   I   L+E+N +
Sbjct: 672 AGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCR 731

Query: 839 MRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDC 897
           +   GYVP T   L D++ + KE L+S HSEK+A+A+ L    K +PIR++KNLR+C DC
Sbjct: 732 ISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPIRVVKNLRMCSDC 791

Query: 898 HSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           HS  K +SK+ GREI +RD+NR+H F +G CSC D+W
Sbjct: 792 HSFAKLVSKLYGREITVRDNNRYHFFKEGFCSCRDFW 828



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 134/529 (25%), Positives = 239/529 (45%), Gaps = 40/529 (7%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++K G   D+F+ N+LI+ Y   G +    K+FDEM +RN VSW  +++GY+   M+
Sbjct: 145 HGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMA 204

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA  +F EMV  G   N   +   + AC +      + G +V  L+ +     + LV N
Sbjct: 205 KEAVCLFFEMVEVGVEPNPVTMVCAISACAKL--KDLELGKKVCNLMTELGVKSNTLVVN 262

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY  C +     R IF+E   ++L+ +N+I+S Y Q G    V  +   M ++G R
Sbjct: 263 ALLDMYMKCGDMY-AVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQR 321

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
               P++ T  S I A   + L    + +   A V + GL     + +A++  + + G  
Sbjct: 322 ----PDKVTMLSTIAAC--AQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKR 375

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
             A K+F+ M  K VV+ N L+ G          L+R G  ++                 
Sbjct: 376 EAACKVFDSMSNKTVVTWNSLIAG----------LVRDGELEL----------------- 408

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
             +  +F  M   + VSWNTMI  + Q   +EEAI     M+  G+     +++   S+C
Sbjct: 409 --ALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASAC 466

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
             LG + L + I+    K  +  D+ +  AL+ +++  G     ++VF  M + D  +W 
Sbjct: 467 GYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWT 526

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           + I   A  E     A++ + +M +     +   F+ +L A S       G Q+   + K
Sbjct: 527 AAIRVKA-VEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEK 585

Query: 488 -YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
            + V+ +      ++   G+ G +++   +   M  + ++V W S ++ 
Sbjct: 586 IHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAA 634



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 138/346 (39%), Gaps = 51/346 (14%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD----------------------- 44
           H  + ++G      + N +I++Y++ G   +A K+FD                       
Sbjct: 347 HAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGEL 406

Query: 45  --------EMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRAC 96
                   EMP+ N VSW  ++       M  EA  + +EM   G   +R  +  +  AC
Sbjct: 407 ELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASAC 466

Query: 97  QECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLI 156
              G         ++  + K++   D  +   L+ M+  C +  + A R+FE +E RD+ 
Sbjct: 467 GYLG--ALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLN-AMRVFENMEKRDVS 523

Query: 157 SWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL-- 214
           +W + I V +  G+     +LF  M ++     +K +++ F +L+T A+S    G Y+  
Sbjct: 524 AWTAAIRVKAVEGNAKGAIELFDEMLKQ----DVKADDFVFVALLT-AFS---HGGYVDQ 575

Query: 215 -LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGR 272
             Q   AM K  G+   +     +V    R G    A  + + M I+ N V     +   
Sbjct: 576 GRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAAC 635

Query: 273 RKGKEVH-----GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
           RK K V         I     + V +   L N+YA  G  +D   V
Sbjct: 636 RKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARV 681



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 59/296 (19%), Positives = 119/296 (40%), Gaps = 57/296 (19%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  +  I K+    D+ L   L++++ R GD  +A ++F+ M  R+  +W   +     
Sbjct: 475 AKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAV 534

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           +G +  A ++F EM++     + +   ++L A        F  G  V             
Sbjct: 535 EGNAKGAIELFDEMLKQDVKADDFVFVALLTA--------FSHGGYV------------- 573

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIE-----TRDLISWNSIISVYSQRGDTISVFKLF 178
                            D  R++F  +E     +  ++ +  ++ +  + G     F L 
Sbjct: 574 -----------------DQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLM 616

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMV-KKAG---LLSDLY 232
             M        +KPN+  +GS + A   + +V   +Y  ++I  +  +K G   LLS++Y
Sbjct: 617 KSM-------PIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIY 669

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLF 288
             +   +  AR+       K F+++   + + ++GL+     G E H    + GL 
Sbjct: 670 ASAGKWNDVARV-RLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLM 724


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/651 (36%), Positives = 369/651 (56%), Gaps = 38/651 (5%)

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           SVF+ +   + +SWNTMI G   +     A+  +  M   GL  ++++      SCA   
Sbjct: 33  SVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSK 92

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD--------------------------A 405
               G+QIH + LK GL  D+ V  +L+S+YA                            
Sbjct: 93  AAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMIT 152

Query: 406 GYLSR-----CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           GY SR       K+F  +P  D VSWN++I  +A+      EA++ + +M +    P+  
Sbjct: 153 GYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEI-GRYKEALELFNEMMKMDVKPDES 211

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           T   +L+  +     +LG Q+H+ +  +   +   + NAL+  Y KCGEM+    +F  +
Sbjct: 212 TMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGL 271

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
            + +D +SWN++I GY +     +A+ +   M++ G+  +  T  ++L ACA +  ++ G
Sbjct: 272 -QYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIG 330

Query: 581 MEVHACGVRAC--LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
             +H    +    +  +  + ++L+DMY+KCG I+ A++ FD +  +++ S N+MI G+A
Sbjct: 331 RWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFA 390

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
            HG  D A  L S+MK DG  PD +TFVG+LSACSHAGL D G K FKSM+  Y + P+L
Sbjct: 391 MHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKL 450

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
           E + CM+DLLGR+G   + EE IN M + P+ +IW ++L AC     +  ELG   A  L
Sbjct: 451 EHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKAC--KIHKNLELGELIAQKL 508

Query: 759 FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
            ++EP+N  +YVLL+N+YA+  +W+DVA+ R  + +  +KK  GCS + +   VH F+ G
Sbjct: 509 MKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIG 568

Query: 819 DESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VL 877
           D+ HP+   IY+ L+E++  + + G+V  T   L ++E E KE  +SYHSEK+A+AF ++
Sbjct: 569 DKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGLI 628

Query: 878 TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKC 928
           +      +RI+KNLRVC +CH A K ISKI  REI+ RD +RFHHF DG C
Sbjct: 629 STKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 146/532 (27%), Positives = 241/532 (45%), Gaps = 72/532 (13%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A  +F+ I+  + +SWN++I  ++   D IS   L+  M   G    L PN YTF  L  
Sbjct: 31  AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLG----LSPNSYTFPFLFK 86

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
           +   S    +   +QI A + K GL  DL+V ++L+S +A+ G    A K+F+    ++V
Sbjct: 87  SCAKS--KAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDV 144

Query: 263 VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
           VS   ++ G                             YA  G +D ++ +F  +  KD 
Sbjct: 145 VSYTAMITG-----------------------------YASRGNMDKAQKMFDEIPIKDV 175

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           VSWN MISG  + G Y+EA+  F  M +  +     ++ + LS+C   G + LG+QIH  
Sbjct: 176 VSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSW 235

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
               G  S++ + NAL+ LY+  G + R   +F  +   D +SWN++IG +A       E
Sbjct: 236 IDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHH-KE 294

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTIENAL 500
           A+  + +M + G +PN VT ++IL A +      +G  +H  + K    +   T+++ +L
Sbjct: 295 ALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSL 354

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD 560
           +  Y KCG ++   ++F  +  +    S N+MI G+  +     A +L+  M + G   D
Sbjct: 355 IDMYAKCGNIEAANQVFDTILNKSLS-SCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPD 413

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
             TF  +LSAC+           HA                L D+    GR  + S   D
Sbjct: 414 DITFVGLLSACS-----------HA---------------GLSDL----GRKIFKSMTLD 443

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
                 +  +  MI    R G   +A  L + M ++   PD V +  +L AC
Sbjct: 444 YRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTME---PDGVIWGSLLKAC 492



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/472 (22%), Positives = 197/472 (41%), Gaps = 83/472 (17%)

Query: 36  LASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRA 95
           L  A  +F  + + N +SW  ++ G+        A  ++  M+  G   N Y    + ++
Sbjct: 28  LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG--------------------- 134
           C +   +  + G Q+H  +LK   T D  V   LI+MY                      
Sbjct: 88  CAKSKAA--QEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVV 145

Query: 135 ---------SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
                    +   + D A+++F+EI  +D++SWN++IS Y++ G      +LF+ M    
Sbjct: 146 SYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEM---- 201

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
            +  +KP+E T  ++++    S      L +QI + +   G  S+L + +AL+  +++ G
Sbjct: 202 MKMDVKPDESTMATVLSTCTHS--GNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCG 259

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------- 274
               A  +FE +  K+V+S N L+ G                                  
Sbjct: 260 EMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILP 319

Query: 275 ----------GKEVHGYLIR--SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                     G+ +H Y+ +   G+    ++   L++MYAKCG I+ +  VF  ++ K  
Sbjct: 320 ACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSL 379

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
            S N MI G   +G  + A      M++DG+   + + +  LS+C+  G   LG++I   
Sbjct: 380 SSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKS 439

Query: 383 -GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
             L   ++  +     ++ L   +G      ++   M  E D V W S++ A
Sbjct: 440 MTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKA 491



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/432 (23%), Positives = 196/432 (45%), Gaps = 60/432 (13%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVR---------------------------- 32
           +++ K  H QILK+G   D+ +  +LI++Y +                            
Sbjct: 94  AQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITG 153

Query: 33  ---VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYAL 89
               G++  A K+FDE+P ++ VSW  ++SGY   G   EA ++F EM++     +   +
Sbjct: 154 YASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTM 213

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
            +VL  C   G    + G Q+H  +       +  + N LI +Y  C E  + A  +FE 
Sbjct: 214 ATVLSTCTHSG--NVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGE-MERAHGLFEG 270

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA--YSS 207
           ++ +D+ISWN++I  Y+          +F  M + G      PN+ T  S++ A     +
Sbjct: 271 LQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLG----ETPNDVTMLSILPACAHLGA 326

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
           +  G ++   I   +K  G++++  + ++L+  +A+ GN   A ++F+ ++ K++ S N 
Sbjct: 327 IDIGRWIHVYIDKKLK--GIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNA 384

Query: 268 L-----MEGRRKGK-EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM---- 317
           +     M GR     ++   + + G+        GL++  +  G  D  R +F+ M    
Sbjct: 385 MIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDY 444

Query: 318 -IGKDSVSWNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
            I      +  MI  L ++G ++EA  ++N   M  DG++       S L +C     + 
Sbjct: 445 RIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWG-----SLLKACKIHKNLE 499

Query: 375 LGQQIHGEGLKL 386
           LG+ I  + +K+
Sbjct: 500 LGELIAQKLMKI 511



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
           + YA   F  +   N  SWN+MI G+A       AL L+  M   G  P+  TF  +  +
Sbjct: 28  LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87

Query: 672 CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
           C+ +    EG K   +    YGL   L   + ++ +  + G ++   +  +         
Sbjct: 88  CAKSKAAQEG-KQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVS 146

Query: 732 IWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKA 791
               + G   R N        KA  M  E+  ++ V++  + + YA  G++++  +    
Sbjct: 147 YTAMITGYASRGNM------DKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNE 200

Query: 792 MKEAEVKKEAGCSWVTMKDGVH 813
           M + +VK +       +    H
Sbjct: 201 MMKMDVKPDESTMATVLSTCTH 222


>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
 gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/590 (37%), Positives = 350/590 (59%), Gaps = 11/590 (1%)

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
           AM R+ L +   +    +  C   G +   + +H      G +    + N L+++Y   G
Sbjct: 6   AMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFG 65

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
            L     +F  MP+ + VSW ++I A+++S  L  +A+ + + M R G  PN  T+ ++L
Sbjct: 66  LLDEARNLFDEMPDRNVVSWTTMISAYSNSN-LNHKALDFLILMLREGVRPNMYTYSSVL 124

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
            A       +   Q+H  ++K  + ++  + +AL+  Y K GE  D   +F  M    D 
Sbjct: 125 RACDGLLNLR---QLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITG-DL 180

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           V WNS+I G+  N    + ++L   M +     D  T  +VL AC  +A LE G +VH  
Sbjct: 181 VVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVH 240

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD-LMPVRNVYSWNSMISGYARHGHGDK 645
            ++   + D+++ +AL+DMY KCG ++ A+  F  +M  ++V SW++MI+G A++G    
Sbjct: 241 VLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSAD 298

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
           AL LF  MK  GP P+++T +GVL ACSHAGLV++G+ +F+SM + +G+ P  E + C++
Sbjct: 299 ALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCII 358

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN 765
           DLLGRAG+LD+  + I++M   P+++ WR +LGAC R + +  +L   AA  + +++P +
Sbjct: 359 DLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGAC-RVH-KNVDLAIYAAKEILKLDPAD 416

Query: 766 AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
           A  Y+LL+N+YA+  KWEDVA+ R+ M+   VKK+ GCSW+ +   VH F+ GD SHP  
Sbjct: 417 AGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRI 476

Query: 826 DLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLP 884
           + I  +L +L Q++   GYVP T F L DLE E  ED + YHSEK+A+ F +++  ++  
Sbjct: 477 EEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKT 536

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           I I KNLR+CGDCH   K +S++  R IV+RD  R+HHF  G CSCGDYW
Sbjct: 537 IHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 198/392 (50%), Gaps = 19/392 (4%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           ++ + VH ++  +G      + N L+NMY K G +D++R++F  M  ++ VSW TMIS  
Sbjct: 33  QQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAY 92

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
             +    +A+     M R+G+  + ++  S L +C  L   +  +Q+HG  LK+GL+SDV
Sbjct: 93  SNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGL---LNLRQLHGSILKVGLESDV 149

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V +AL+  Y+  G     L VF  M   D V WNS+IG FA +     E +  Y  M+R
Sbjct: 150 FVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSD-GDETLHLYKRMKR 208

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           A +  +  T  ++L A +  ++ +LG QVH  V+KY+   +  + NALL  Y KCG ++D
Sbjct: 209 ADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYD--QDLILNNALLDMYCKCGSLED 266

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
              +F RM   +D +SW++MI+G   N     A+ L   M  +G + ++ T   VL AC+
Sbjct: 267 ANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACS 326

Query: 573 SVATLERG------MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR- 625
               +  G      M+ H  G+    E        ++D+  + G++D A +    M    
Sbjct: 327 HAGLVNDGWYYFQSMKEH-FGIDPGREH----YGCIIDLLGRAGKLDEAVKLIHEMNHEP 381

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQ-MKLD 656
           +  +W  ++     H + D A+    + +KLD
Sbjct: 382 DAVTWRILLGACRVHKNVDLAIYAAKEILKLD 413



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 141/274 (51%), Gaps = 21/274 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           + A+L H  +  +G+    FL NTLIN+YV+ G L  A  LFDEMPDRN VSW  ++S Y
Sbjct: 33  QQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAY 92

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           ++  ++++A      M+R G   N Y   SVLRAC      G     Q+H  +LK     
Sbjct: 93  SNSNLNHKALDFLILMLREGVRPNMYTYSSVLRAC-----DGLLNLRQLHGSILKVGLES 147

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V + LI  Y    E  D A  +F E+ T DL+ WNSII  ++Q  D      L+ RM
Sbjct: 148 DVFVRSALIDTYSKLGEQHD-ALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRM 206

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ---QILAMVKKAGLLSDLYVGSALV 238
           +R  F      ++ T  S++ A      +G  LL+   Q+   V K     DL + +AL+
Sbjct: 207 KRADF----VADQSTLTSVLRAC-----TGLALLELGRQVHVHVLKYD--QDLILNNALL 255

Query: 239 SGFARLGNFYYARKIFEQMI-QKNVVSMNGLMEG 271
             + + G+   A  +F +M+ +K+V+S + ++ G
Sbjct: 256 DMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAG 289



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 130/254 (51%), Gaps = 15/254 (5%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  ILK G   DVF+ + LI+ Y ++G+   A  +F+EM   + V W  I+ G+     
Sbjct: 136 LHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSD 195

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            +E   ++K M RA F+ ++  L SVLRAC   G +  + G QVH  VLK +Q  D +++
Sbjct: 196 GDETLHLYKRMKRADFVADQSTLTSVLRAC--TGLALLELGRQVHVHVLKYDQ--DLILN 251

Query: 127 NVLIAMYGSCLESTDCARRIFEEIET-RDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           N L+ MY  C  S + A  +F  + T +D+ISW+++I+  +Q G +    KLF  M+ +G
Sbjct: 252 NALLDMYCKC-GSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKG 310

Query: 186 FRYSLKPNEYT-FGSLITAAYSSVLS-GSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
                KPN  T  G L   +++ +++ G Y  Q   +M +  G+         ++    R
Sbjct: 311 ----PKPNYITILGVLFACSHAGLVNDGWYYFQ---SMKEHFGIDPGREHYGCIIDLLGR 363

Query: 244 LGNFYYARKIFEQM 257
            G    A K+  +M
Sbjct: 364 AGKLDEAVKLIHEM 377


>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Brachypodium distachyon]
          Length = 598

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/570 (40%), Positives = 336/570 (58%), Gaps = 19/570 (3%)

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLS---LYADAGYLSRCLKVFF-----LMPEHDQVSWN 427
            +Q+H   L+      V+ S+ LL+   L+  A   +  L+        L+P  D  S N
Sbjct: 37  AKQLHARALRAA--PGVTPSHPLLAKHLLFHLAALKAPPLRYAVAVLSGLLPSPDPFSLN 94

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           +V+  FA S A    A+  +   RR    P+  T+  +L A +     + G  +HA+  K
Sbjct: 95  TVLRIFASS-ARPRVALALH---RRHLAPPDTHTYPPLLQACARLLALRYGEGLHAEACK 150

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSE-RRDEVSWNSMISGYIHNELLPKAM 546
             + +   ++N+L+  YG CG  +   ++F  +    R+ VSWNS+++G+  N    + +
Sbjct: 151 NGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPPPERNLVSWNSVLNGFAANGRPNEVL 210

Query: 547 NLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMY 606
            +   M++     D FT  +VL+ACA +  L  G  VH    +  L  +   G+AL+D+Y
Sbjct: 211 TVFREMLEVEFAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKVGLVGNAHAGNALIDLY 270

Query: 607 SKCGRIDYASRFFDLMPV-RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
           +KCG +D A + F  M V R V SW S+I G A +G G  AL LFS M+ +  +P  +T 
Sbjct: 271 AKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITM 330

Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
           VGVL ACSH GLVD+GF++F  M   YG+ P++E   CMVDLLGRAG +++   +I  MP
Sbjct: 331 VGVLYACSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRAGRVEEAHNYITTMP 390

Query: 726 ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDV 785
           + PN+++WRT+LGAC  A  +K E+G  A   L E++P ++ +YVLL+N+YA  G+W DV
Sbjct: 391 LEPNAVVWRTLLGAC--AMHKKLEIGEAAWARLVELDPGHSGDYVLLSNLYAGVGRWADV 448

Query: 786 AKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
              RK M    V+K  G S V +++ V+ FV GD SHPE D IYE L ++ +++R  GY+
Sbjct: 449 HVLRKTMVTHGVRKNPGHSLVELRNSVYEFVMGDRSHPETDQIYEMLGDIAERLRRQGYI 508

Query: 846 PQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRN-SKLPIRIMKNLRVCGDCHSAFKFI 904
           P T   L D+E E KE  ++YHSE++A+AF L ++    PIRI+KNLRVCGDCH A K I
Sbjct: 509 PHTSNVLADIEDEEKESALNYHSERLAIAFALLKSLPGTPIRIVKNLRVCGDCHMAIKLI 568

Query: 905 SKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           SK+  REI++RD +RFHHF  G CSC DYW
Sbjct: 569 SKVYDREIIVRDRSRFHHFKGGACSCKDYW 598



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 135/300 (45%), Gaps = 13/300 (4%)

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           RR        +    L +CA L  +  G+ +H E  K GL S V V N+L+ LY   G  
Sbjct: 114 RRHLAPPDTHTYPPLLQACARLLALRYGEGLHAEACKNGLVSLVFVKNSLVHLYGACGLF 173

Query: 409 SRCLKVF--FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
               +VF     PE + VSWNSV+  FA +    +E +  + +M    ++P+G T +++L
Sbjct: 174 ESAHRVFDEIPPPERNLVSWNSVLNGFA-ANGRPNEVLTVFREMLEVEFAPDGFTVVSVL 232

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
            A +   +  LG +VH  V K  +       NAL+  Y KCG +DD  K+F  M   R  
Sbjct: 233 TACAEIGVLALGRRVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTV 292

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH-- 584
           VSW S+I G   N     A+ L   M +        T   VL AC+    ++ G      
Sbjct: 293 VSWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYACSHCGLVDDGFRYFDQ 352

Query: 585 ---ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARH 640
                G+   +E    +G  +VD+  + GR++ A  +   MP+  N   W +++   A H
Sbjct: 353 MKAEYGITPRIEH---LG-CMVDLLGRAGRVEEAHNYITTMPLEPNAVVWRTLLGACAMH 408



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 10/200 (5%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVSGYTHK 64
            H +  K+G    VF+ N+L+++Y   G   SA ++FDE+P  +RN VSW  +++G+   
Sbjct: 144 LHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPPPERNLVSWNSVLNGFAAN 203

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G  NE   +F+EM+   F  + + + SVL AC E G      G +VH  V K     +  
Sbjct: 204 GRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIG--VLALGRRVHVFVAKVGLVGNAH 261

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIET-RDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
             N LI +Y  C    D AR++F E+   R ++SW S+I   +  G  +   +LFS M+R
Sbjct: 262 AGNALIDLYAKC-GGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFSMMER 320

Query: 184 EGFRYSLKPNEYTFGSLITA 203
           E     L P E T   ++ A
Sbjct: 321 E----KLMPTEITMVGVLYA 336



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 5/265 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG--KDSVSWNTMIS 330
           R G+ +H    ++GL  +V V N LV++Y  CG  + +  VF  +    ++ VSWN++++
Sbjct: 139 RYGEGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPPPERNLVSWNSVLN 198

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           G   NG   E +  F  M         F+++S L++CA +G + LG+++H    K+GL  
Sbjct: 199 GFAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKVGLVG 258

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           +    NAL+ LYA  G +    K+F  M      VSW S+I   A       +A++ +  
Sbjct: 259 NAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLA-VNGFGMDALQLFSM 317

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-IKYNVANETTIENALLSCYGKCG 508
           M R    P  +T + +L A S   +   G +   Q+  +Y +         ++   G+ G
Sbjct: 318 MEREKLMPTEITMVGVLYACSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRAG 377

Query: 509 EMDDCEKIFARMSERRDEVSWNSMI 533
            +++       M    + V W +++
Sbjct: 378 RVEEAHNYITTMPLEPNAVVWRTLL 402



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 124/268 (46%), Gaps = 29/268 (10%)

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC--LESTDCARRIFE 148
            +L+AC        ++G  +H    K+       V N L+ +YG+C   ES   A R+F+
Sbjct: 127 PLLQACARL--LALRYGEGLHAEACKNGLVSLVFVKNSLVHLYGACGLFES---AHRVFD 181

Query: 149 EIET--RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AY 205
           EI    R+L+SWNS+++ ++  G    V  +F    RE       P+ +T  S++TA A 
Sbjct: 182 EIPPPERNLVSWNSVLNGFAANGRPNEVLTVF----REMLEVEFAPDGFTVVSVLTACAE 237

Query: 206 SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNVVS 264
             VL+   L +++   V K GL+ + + G+AL+  +A+ G    ARK+F +M + + VVS
Sbjct: 238 IGVLA---LGRRVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVS 294

Query: 265 MNGLMEGRR------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
              L+ G           ++   + R  L        G++   + CG +DD    F  M 
Sbjct: 295 WTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYACSHCGLVDDGFRYFDQMK 354

Query: 319 GKDSVS-----WNTMISGLDQNGCYEEA 341
            +  ++        M+  L + G  EEA
Sbjct: 355 AEYGITPRIEHLGCMVDLLGRAGRVEEA 382



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 3/102 (2%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP-DRNSVSWACIVSGYTHKGM 66
           H+ + K G   +    N LI++Y + G +  A K+F EM   R  VSW  ++ G    G 
Sbjct: 248 HVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNGF 307

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKF 106
             +A ++F  M R   +     +  VL AC  CG    GF++
Sbjct: 308 GMDALQLFSMMEREKLMPTEITMVGVLYACSHCGLVDDGFRY 349


>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
 gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 237/668 (35%), Positives = 375/668 (56%), Gaps = 11/668 (1%)

Query: 273 RKGKEVHGYLI---RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
           R G+ +H +LI   +S   +     N L+N+Y KC     +R +F  M  ++ VSW  M+
Sbjct: 48  RIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMM 107

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
            G   +G   E +  F +M   G    N F       SC++ G I  G+Q HG  LK GL
Sbjct: 108 KGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGL 167

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
            S   V N L+ +Y+        ++V   +P  D   ++S +  + +  A   E +    
Sbjct: 168 ISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAF-KEGLDVLR 226

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
                 +  N +T+++ L   S+     L  QVH++++++    E     AL++ YGKCG
Sbjct: 227 KTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCG 286

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
           ++   +++F     +   ++  +++  Y  ++   +A+NL   M  +    + +TFA +L
Sbjct: 287 KVLYAQRVFDDTHAQNIFLN-TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILL 345

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
           ++ A ++ L++G  +H   +++     V++G+ALV+MY+K G I+ A + F  M  R++ 
Sbjct: 346 NSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIV 405

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           +WN+MISG + HG G +AL  F +M   G +P+ +TF+GVL ACSH G V++G  +F  +
Sbjct: 406 TWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQL 465

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRK 747
            + + + P ++ ++C+V LL +AG     E+F+   PI  + + WRT+L AC  R N R 
Sbjct: 466 MKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYR- 524

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
             LG+K A    E  P ++  YVLL+N++A   +WE VAK R  M    VKKE G SW+ 
Sbjct: 525 --LGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIG 582

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
           +++  HVF+A D  HPE  LIY K+KE+  K++  GY P    A  D++ E +ED +SYH
Sbjct: 583 IRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYH 642

Query: 868 SEKIAVAFVLTRN-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SEK+AVA+ L +   K P+ + KN+R+C DCHSA K ISKI  R IV+RDSNRFHHF DG
Sbjct: 643 SEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDG 702

Query: 927 KCSCGDYW 934
           +CSC DYW
Sbjct: 703 QCSCCDYW 710



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 206/460 (44%), Gaps = 53/460 (11%)

Query: 17  AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKE 76
           A D +  N+LIN+YV+  +   A KLFD MP+RN VSW  ++ GY + G   E  K+FK 
Sbjct: 66  AEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKS 125

Query: 77  MVRAG-FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS 135
           M  +G    N +    V ++C   G    + G Q H   LK        V N L+ MY  
Sbjct: 126 MFFSGESRPNEFVATVVFKSCSNSGR--IEEGKQFHGCFLKYGLISHEFVRNTLVYMYSL 183

Query: 136 CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
           C  + + A R+ +++   DL  ++S +S Y + G       +  +   E F +    N  
Sbjct: 184 CSGNGE-AIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVW----NNL 238

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
           T+  L +    S L    L  Q+ + + + G  +++    AL++ + + G   YA+++F+
Sbjct: 239 TY--LSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFD 296

Query: 256 QMIQKNVVSMNGLMEGR-----------------------------------------RK 274
               +N+     +M+                                           ++
Sbjct: 297 DTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQ 356

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G  +HG +++SG  + V VGN LVNMYAK G+I+D+R  F  M  +D V+WNTMISG   
Sbjct: 357 GDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSH 416

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL-KLGLDSDVS 393
           +G   EA+  F  M   G + +  + I  L +C+ +G++  G     + + K  +  D+ 
Sbjct: 417 HGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQ 476

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
               ++ L + AG            P E D V+W +++ A
Sbjct: 477 HYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 156/352 (44%), Gaps = 22/352 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ K FH   LK+G     F+ NTL+ +Y        A ++ D++P  +   ++  +SGY
Sbjct: 153 EEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   E   + ++     F+ N     S LR             +QVH  +++     
Sbjct: 213 LECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNL--RDLNLALQVHSRMVRFGFNA 270

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +      LI MYG C +    A+R+F++   +++    +I+  Y Q         LFS+M
Sbjct: 271 EVEACGALINMYGKCGKVL-YAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKM 329

Query: 182 QREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
             +     + PNEYTF  L+ + A  S+L    LL     +V K+G  + + VG+ALV+ 
Sbjct: 330 DTK----EVPPNEYTFAILLNSIAELSLLKQGDLLH---GLVLKSGYRNHVMVGNALVNM 382

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVG 294
           +A+ G+   ARK F  M  +++V+ N ++ G       R+  E    +I +G        
Sbjct: 383 YAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITF 442

Query: 295 NGLVNMYAKCGTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEA 341
            G++   +  G ++     F     +F +  D   +  ++  L + G +++A
Sbjct: 443 IGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDA 494



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 124/285 (43%), Gaps = 19/285 (6%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H ++++ GF  +V  C  LIN+Y + G +  A ++FD+   +N      I+  Y      
Sbjct: 260 HSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSF 319

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA  +F +M       N Y    +L +  E   S  K G  +H LVLKS      +V N
Sbjct: 320 EEALNLFSKMDTKEVPPNEYTFAILLNSIAEL--SLLKQGDLLHGLVLKSGYRNHVMVGN 377

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY     S + AR+ F  +  RD+++WN++IS  S  G      + F RM   G  
Sbjct: 378 ALVNMYAKS-GSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTG-- 434

Query: 188 YSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
               PN  TF  ++ A      V  G +   Q++   KK  +  D+   + +V   ++ G
Sbjct: 435 --EIPNRITFIGVLQACSHIGFVEQGLHYFNQLM---KKFDVQPDIQHYTCIVGLLSKAG 489

Query: 246 NFYYARKIFEQM-IQKNVVSMNGLMEG------RRKGKEVHGYLI 283
            F  A        I+ +VV+   L+         R GK+V  Y I
Sbjct: 490 MFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAI 534


>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 788

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 234/676 (34%), Positives = 371/676 (54%), Gaps = 28/676 (4%)

Query: 274 KGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           +G+  H   IR G+    V  GN L+  YA+ G +DD+  VF  M  +D V+WN+M+ G 
Sbjct: 126 EGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMPARDVVTWNSMVDGY 185

Query: 333 DQNGCYEEAIMNFCAMRRD-GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
             NG    A++ F  M     +      +I+ L++C     +M G+++H   ++ G++ D
Sbjct: 186 VSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREVHAYVIRHGMEHD 245

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           V V  ++L +Y   G ++    VF  MP    V+WN +IG +A +E    EA   ++ M+
Sbjct: 246 VKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNER-PEEAFDCFVQMK 304

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             G     VT IN+LAA +       G  VH  + +        +E ALL  Y K G++ 
Sbjct: 305 AEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVK 364

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
             EK+F +M+ +   VSWN+MI+ Y++ E+  +A+ L   ++ +    D+FT + V+ A 
Sbjct: 365 SSEKVFGQMTTK-TLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAF 423

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
             +  L +  ++H+  +R     + +I +A++ MY++CG +  +   FD M  ++V SWN
Sbjct: 424 VLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWN 483

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           +MI GYA HG G  AL +FS+MK +G  P+  TFV VL+ACS +GL DEG+  F SM + 
Sbjct: 484 TMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSGLTDEGWTQFNSMQRD 543

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
           YG+IPQ+E + CM DLLGRAG+L ++ +FI  MPI P   +W ++L A    N    ++ 
Sbjct: 544 YGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDPTFRVWGSLLTA--SRNRNDIDIA 601

Query: 752 RKAANMLFEMEP-----QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
             AA  +F++E       N   YVL+++MYA  G+W+DV + +  M+E  +++    S V
Sbjct: 602 EYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKDVERIKSLMEEKGLRRTDPRSIV 661

Query: 807 TMKDGVHVFVAGDESHPEKDLIYE-------KLKELNQKMRDAGYVPQTKFALFDLEPES 859
            +      FV GD +HP+  +I E       K+ E+   M  +   P +  +    EP  
Sbjct: 662 ELHGISCSFVNGDTTHPQSKMIQEVSNFLSGKIGEMRDPMNQSD--PTSLDSRRTTEPNK 719

Query: 860 KEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSN 918
                  HS ++AV F +++  ++ PI + KN+R+C DCH A K ISK  GR IV+ D+N
Sbjct: 720 -------HSVRLAVVFGLISTEARTPILVKKNVRICNDCHHALKLISKYSGRRIVVGDTN 772

Query: 919 RFHHFNDGKCSCGDYW 934
            +H F+DG C CGDYW
Sbjct: 773 IYHQFSDGSCCCGDYW 788



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 222/470 (47%), Gaps = 15/470 (3%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           LV  +A  G +DD++        +D+   N +I GL   G    A+  + AM   G    
Sbjct: 48  LVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARPD 107

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGL-DSDVSVSNALLSLYADAGYLSRCLKVF 415
            F+    L  CA LG +  G+  H   ++LG+  +DV   N+LL+ YA  G +    +VF
Sbjct: 108 RFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVF 167

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA-GWSPNGVTFINILAAASSFSM 474
             MP  D V+WNS++  +  S  L + A+  + +M  A     +GV  I  LAA    S 
Sbjct: 168 DGMPARDVVTWNSMVDGYV-SNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESA 226

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
              G +VHA VI++ + ++  +  ++L  Y KCG++   E +FA M   R  V+WN MI 
Sbjct: 227 LMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPS-RTVVTWNCMIG 285

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           GY  NE   +A +    M   G +++  T   +L+ACA   +   G  VH    R     
Sbjct: 286 GYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLP 345

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
            VV+ +AL++MYSK G++  + + F  M  + + SWN+MI+ Y       +A+TLF  + 
Sbjct: 346 HVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDL- 404

Query: 655 LDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGE 713
           L+ PL PD+ T   V+ A    GL+ +  +   S     G        + ++ +  R G+
Sbjct: 405 LNQPLYPDYFTMSAVVPAFVLLGLLRQ-CRQMHSYIIRLGYGENTLIMNAIMHMYARCGD 463

Query: 714 LDKIEEFINKMPITPNSLIWRT-VLGACCRANCRKTELGRKAANMLFEME 762
           +    E  +KM    + + W T ++G            GR A  M  EM+
Sbjct: 464 VLSSREIFDKMA-AKDVISWNTMIMGYAIHGQ------GRSALEMFSEMK 506



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 200/461 (43%), Gaps = 55/461 (11%)

Query: 17  AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKE 76
           A DV+  N+L+  Y R+G +  A ++FD MP R+ V+W  +V GY   G+   A   F+E
Sbjct: 141 AADVYTGNSLLAFYARLGLVDDAERVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFRE 200

Query: 77  MVRAGFLLNRYALG--SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
           M  A   +    +G  + L AC  C  S    G +VH  V++     D  V   ++ MY 
Sbjct: 201 MHEA-LEVQHDGVGIIAALAAC--CLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYC 257

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
            C +    A  +F  + +R +++WN +I  Y+        F  F +M+ EG +  +    
Sbjct: 258 KCGDIAS-AEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEV---- 312

Query: 195 YTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
            T  +L+ A   +    S   + +   + +   L  + + +AL+  ++++G    + K+F
Sbjct: 313 VTAINLLAACAQT--ESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVF 370

Query: 255 EQMIQKNVVSMNGLMEGR-----------------------------------------R 273
            QM  K +VS N ++                                            R
Sbjct: 371 GQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLR 430

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           + +++H Y+IR G  +   + N +++MYA+CG +  SR +F  M  KD +SWNTMI G  
Sbjct: 431 QCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYA 490

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDV 392
            +G    A+  F  M+ +GL  +  + +S L++C+  G    G  Q +      G+   +
Sbjct: 491 IHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQI 550

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
                +  L   AG L   ++    MP       W S++ A
Sbjct: 551 EHYGCMTDLLGRAGDLKEVMQFIENMPIDPTFRVWGSLLTA 591



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 115/496 (23%), Positives = 203/496 (40%), Gaps = 56/496 (11%)

Query: 85  NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN-QTFDGLVSNVLIAMYGSCLESTDCA 143
           +R+    VL+ C   G      G   H   ++      D    N L+A Y   L   D A
Sbjct: 107 DRFTFPVVLKCCARLG--ALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYAR-LGLVDDA 163

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
            R+F+ +  RD+++WNS++  Y   G        F  M       +L+      G  I A
Sbjct: 164 ERVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHE-----ALEVQHDGVG--IIA 216

Query: 204 AYSSVLSGSYLLQ--QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
           A ++    S L+Q  ++ A V + G+  D+ VG++++  + + G+   A  +F  M  + 
Sbjct: 217 ALAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRT 276

Query: 262 VVSMNGLM-----------------------------------------EGRRKGKEVHG 280
           VV+ N ++                                         E    G+ VHG
Sbjct: 277 VVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHG 336

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
           Y+ R      V +   L+ MY+K G +  S  VF  M  K  VSWN MI+       Y E
Sbjct: 337 YITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYME 396

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           AI  F  +    L    F++ + + +   LG +   +Q+H   ++LG   +  + NA++ 
Sbjct: 397 AITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMH 456

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +YA  G +    ++F  M   D +SWN++I  +A        A++ + +M+  G  PN  
Sbjct: 457 MYARCGDVLSSREIFDKMAAKDVISWNTMIMGYA-IHGQGRSALEMFSEMKCNGLRPNES 515

Query: 461 TFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           TF+++L A S   +   G  Q ++    Y +  +      +    G+ G++ +  +    
Sbjct: 516 TFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIEN 575

Query: 520 MSERRDEVSWNSMISG 535
           M        W S+++ 
Sbjct: 576 MPIDPTFRVWGSLLTA 591



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 164/349 (46%), Gaps = 44/349 (12%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +++HG  +DV +  +++++Y + GD+ASA  +F  MP R  V+W C++ GY      
Sbjct: 234 HAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERP 293

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA   F +M   G  +      ++L AC +   S   +G  VH  + +       ++  
Sbjct: 294 EEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESS--LYGRSVHGYITRRQFLPHVVLET 351

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY S +     + ++F ++ T+ L+SWN++I+ Y  +   +    LF  +  +   
Sbjct: 352 ALLEMY-SKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQ--- 407

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAM---VKKAGLLSDLYVGSALVSGFARL 244
             L P+ +T  +++ A    VL G  LL+Q   M   + + G   +  + +A++  +AR 
Sbjct: 408 -PLYPDYFTMSAVVPAF---VLLG--LLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARC 461

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA-- 302
           G+   +R+IF++M  K+V+S N ++     G  +HG             G   + M++  
Sbjct: 462 GDVLSSREIFDKMAAKDVISWNTMI----MGYAIHGQ------------GRSALEMFSEM 505

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           KC  +  + S F  ++   SVS           G  +E    F +M+RD
Sbjct: 506 KCNGLRPNESTFVSVLTACSVS-----------GLTDEGWTQFNSMQRD 543



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 52/99 (52%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H  I++ G+  +  + N ++++Y R GD+ S+ ++FD+M  ++ +SW  ++ GY
Sbjct: 430 RQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGY 489

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G    A +MF EM   G   N     SVL AC   G
Sbjct: 490 AIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSG 528


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 225/638 (35%), Positives = 362/638 (56%), Gaps = 29/638 (4%)

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
           S++W  +I     +G    ++ +F  +R  G+        S L +        L Q +H 
Sbjct: 41  SLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHA 100

Query: 382 EGLKLGLDSDVSVSNALLSLYAD----------------------AGYLSRCLKVFFLMP 419
             ++LG   D+  +NAL+++Y+                       +  +    K+F  MP
Sbjct: 101 AVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMP 160

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             D VSWN+VI   A +  +  EA+    +M +    P+  T  +IL   +  +    G 
Sbjct: 161 VRDVVSWNTVIAGNAQN-GMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGK 219

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           ++H   I++    +  I ++L+  Y KC +++     F  +S R D +SWNS+I+G + N
Sbjct: 220 EIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNR-DAISWNSIIAGCVQN 278

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
               + +     M++   +    +F++V+ ACA +  L  G ++HA  +R   + +  I 
Sbjct: 279 GRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIA 338

Query: 600 SALVDMYSKCGRIDYASRFFDLMPV--RNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           S+L+DMY+KCG I  A   F+ + +  R++ SW ++I G A HGH   A++LF +M +DG
Sbjct: 339 SSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDG 398

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
             P +V F+ VL+ACSHAGLVDEG+K+F SM + +G+ P LE ++ + DLLGRAG L++ 
Sbjct: 399 VKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEA 458

Query: 718 EEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYA 777
            +FI+ M   P   +W T+L A CRA+ +  EL  K  N +  ++P N   +V+++N+Y+
Sbjct: 459 YDFISNMGEEPTGSVWSTLLAA-CRAH-KNIELAEKVVNKILLVDPGNMGAHVIMSNIYS 516

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
           +  +W D AK R  M++  +KK   CSW+ + + VH F+AGD+SHP  D I E L  L +
Sbjct: 517 AAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLE 576

Query: 838 KMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGD 896
           +M   GYV  T   L D++ E K DL+  HSE++A+AF +++  S   IR++KN+RVC D
Sbjct: 577 QMEKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVD 636

Query: 897 CHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           CH+A KF++KIVGREI++RD++RFHHF +G CSCGDYW
Sbjct: 637 CHTAIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 136/534 (25%), Positives = 240/534 (44%), Gaps = 68/534 (12%)

Query: 152 TRDLISWNSIISVYSQRG---DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
           T   ++W  II  Y+  G    +++ F L          + + P+ + F SL+ A  S++
Sbjct: 38  TPHSLAWICIIKCYASHGLLRHSLASFNLLRS-------FGISPDRHLFPSLLRA--STL 88

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
                L Q + A V + G   DLY  +AL++ +++                         
Sbjct: 89  FKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKF------------------------ 124

Query: 269 MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
                     H +L  S L +     +   N Y+    ID  R +F  M  +D VSWNT+
Sbjct: 125 ----------HPHL--SPLHEFPQARHNHNNKYSV--KIDSVRKLFDRMPVRDVVSWNTV 170

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           I+G  QNG YEEA+     M ++ L   +F+L S L        +  G++IHG  ++ G 
Sbjct: 171 IAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGF 230

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           D DV + ++L+ +YA    +   +  F L+   D +SWNS+I     +     + + ++ 
Sbjct: 231 DKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQN-GRFDQGLGFFR 289

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            M +    P  V+F +++ A +  +   LG Q+HA +I+    +   I ++LL  Y KCG
Sbjct: 290 RMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCG 349

Query: 509 EMDDCEKIFARMSE-RRDEVSWNSMISG-YIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
            +     IF ++    RD VSW ++I G  +H   L  A++L   M+  G +  +  F  
Sbjct: 350 NIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHAL-DAVSLFEEMLVDGVKPCYVAFMA 408

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLM 622
           VL+AC+    ++ G +      R   +F V  G    +A+ D+  + GR++ A  F   M
Sbjct: 409 VLTACSHAGLVDEGWKYFNSMQR---DFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNM 465

Query: 623 ---PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP--LPDHVTFVGVLSA 671
              P  +V  W+++++    H + + A  + +++ L  P  +  HV    + SA
Sbjct: 466 GEEPTGSV--WSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSA 517



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 138/294 (46%), Gaps = 37/294 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGD----------------------LASASK 41
           A+  H  +++ GF +D++  N L+N+Y +                         + S  K
Sbjct: 95  AQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRK 154

Query: 42  LFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGP 101
           LFD MP R+ VSW  +++G    GM  EA  M KEM +     + + L S+L    E   
Sbjct: 155 LFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTE--H 212

Query: 102 SGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWN 159
           +    G ++H   ++     D  + + LI MY  C  +E + CA   F  +  RD ISWN
Sbjct: 213 ANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCA---FHLLSNRDAISWN 269

Query: 160 SIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQIL 219
           SII+   Q G        F RM +E     +KP + +F S+I A   + L+   L +Q+ 
Sbjct: 270 SIIAGCVQNGRFDQGLGFFRRMLKE----KVKPMQVSFSSVIPAC--AHLTALNLGKQLH 323

Query: 220 AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE--QMIQKNVVSMNGLMEG 271
           A + + G   + ++ S+L+  +A+ GN   AR IF   +M  +++VS   ++ G
Sbjct: 324 AYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMG 377



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 105/455 (23%), Positives = 187/455 (41%), Gaps = 86/455 (18%)

Query: 50  NSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQ 109
           +S++W CI+  Y   G+   +   F  +   G   +R+   S+LRA        F     
Sbjct: 40  HSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLF--KHFNLAQS 97

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYG------SCLES---------------TDCARRIFE 148
           +H  V++    FD   +N L+ MY       S L                  D  R++F+
Sbjct: 98  LHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFD 157

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL--ITAAYS 206
            +  RD++SWN++I+  +Q G       +   M +E    +L+P+ +T  S+  I   ++
Sbjct: 158 RMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKE----NLRPDSFTLSSILPIFTEHA 213

Query: 207 SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN 266
           +V  G    ++I     + G   D+++GS+L+  +A+      +   F  +  ++ +S N
Sbjct: 214 NVTKG----KEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWN 269

Query: 267 GLMEG--------------RRK---------------------------GKEVHGYLIRS 285
            ++ G              RR                            GK++H Y+IR 
Sbjct: 270 SIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRL 329

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF--MIGKDSVSWNTMISGLDQNGCYEEAIM 343
           G  D   + + L++MYAKCG I  +R +F    M  +D VSW  +I G   +G   +A+ 
Sbjct: 330 GFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVS 389

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASL-----GWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
            F  M  DG+     + ++ L++C+       GW          G+  GL+   +V++  
Sbjct: 390 LFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVAD-- 447

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
             L   AG L         M E    S W++++ A
Sbjct: 448 --LLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAA 480



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 9/201 (4%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   ++HGF  DVF+ ++LI++Y +   +  +   F  + +R+++SW  I++G    
Sbjct: 219 KEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQN 278

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G  ++    F+ M++      + +  SV+ AC     +    G Q+H  +++     +  
Sbjct: 279 GRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHL--TALNLGKQLHAYIIRLGFDDNKF 336

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIET--RDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
           +++ L+ MY  C  +   AR IF +IE   RD++SW +II   +  G  +    LF  M 
Sbjct: 337 IASSLLDMYAKC-GNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEML 395

Query: 183 REGFRYSLKPNEYTFGSLITA 203
            +G    +KP    F +++TA
Sbjct: 396 VDG----VKPCYVAFMAVLTA 412



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 4/106 (3%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD--EMPDRNSVSWACIVSGYT 62
           K  H  I++ GF  + F+ ++L+++Y + G++  A  +F+  EM DR+ VSW  I+ G  
Sbjct: 320 KQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCA 379

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKF 106
             G + +A  +F+EM+  G      A  +VL AC   G    G+K+
Sbjct: 380 MHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKY 425


>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 254/799 (31%), Positives = 401/799 (50%), Gaps = 121/799 (15%)

Query: 215 LQQILAMVKKAGLLSDLYVGSALV---SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
            +Q+L+     GL++D Y  S L+   S    L  F+Y+ +IF  +   N  + N +M  
Sbjct: 19  FKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPNTFTWNTIMRA 78

Query: 272 RR------------------------------------------KGKEVHGYLIRSGLFD 289
                                                       +G+++H + + SG   
Sbjct: 79  HLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDG 138

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
            V V N L+N+YA CG++  +R VF      D VSWNT+++G  Q G  EEA   F    
Sbjct: 139 DVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVF---- 194

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
                                           EG+    + +   SN++++L+   G + 
Sbjct: 195 --------------------------------EGMP---ERNTIASNSMIALFGRKGCVE 219

Query: 410 RCLKVF--FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +  ++F      E D VSW++++  +  +E +  EA+  +++M+ +G + + V  ++ L+
Sbjct: 220 KARRIFNGVRGRERDMVSWSAMVSCYEQNE-MGEEALVLFVEMKGSGVAVDEVVVVSALS 278

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
           A S     ++G  VH   +K  V +  +++NAL+  Y  CGE+ D  +IF    E  D +
Sbjct: 279 ACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLI 338

Query: 528 SWNSMISGYI-------------------------------HNELLPKAMNLVWFMMQRG 556
           SWNSMISGY+                                +E   +A+ L   M   G
Sbjct: 339 SWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHG 398

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
            R D     + +SAC  +ATL+ G  +HA   R  L+ +V++ + L+DMY KCG ++ A 
Sbjct: 399 VRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENAL 458

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
             F  M  + V +WN++I G A +G  +++L +F+ MK  G +P+ +TF+GVL AC H G
Sbjct: 459 EVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMG 518

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
           LV++G  +F SM   + +   ++ + CMVDLLGRAG L + EE I+ MP+ P+   W  +
Sbjct: 519 LVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGAL 578

Query: 737 LGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAE 796
           LGAC +   R  E+G +    L +++P +   +VLL+N+YAS G W +V + R  M +  
Sbjct: 579 LGACRKH--RDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHG 636

Query: 797 VKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLE 856
           V K  GCS +     VH F+AGD++HP+ + I   L  +  K++  GYVP T     D++
Sbjct: 637 VVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIEGYVPTTSEVSLDID 696

Query: 857 PESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLR 915
            E KE  +  HSEK+AVAF ++T +   PIR+ KNLR+C DCH+  K ISK   R+IV+R
Sbjct: 697 EEEKETALFRHSEKLAVAFGLITISPPTPIRVTKNLRICNDCHTVVKLISKAFDRDIVVR 756

Query: 916 DSNRFHHFNDGKCSCGDYW 934
           D +RFHHF  G CSC D+W
Sbjct: 757 DRHRFHHFKHGACSCMDFW 775



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 133/536 (24%), Positives = 241/536 (44%), Gaps = 84/536 (15%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H   +  GF  DV++ NTL+N+Y   G + SA ++F+E P  + VSW  +++GY 
Sbjct: 123 EGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYV 182

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G   EA ++F+ M                                            +
Sbjct: 183 QAGEVEEAERVFEGMPER-----------------------------------------N 201

Query: 123 GLVSNVLIAMYG--SCLESTDCARRIFEEI--ETRDLISWNSIISVYSQRGDTISVFKLF 178
            + SN +IA++G   C+E    ARRIF  +    RD++SW++++S Y Q         LF
Sbjct: 202 TIASNSMIALFGRKGCVEK---ARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLF 258

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
             M+  G                 +A S VL+   + + +  +  K G+   + + +AL+
Sbjct: 259 VEMKGSGVAVDEVVVVSAL-----SACSRVLNVE-MGRWVHGLAVKVGVEDYVSLKNALI 312

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLV 298
             ++  G    AR+IF+                   G E         L D+++  N ++
Sbjct: 313 HLYSSCGEIVDARRIFDD------------------GGE---------LLDLIS-WNSMI 344

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
           + Y +CG+I D+  +F  M  KD VSW+ MISG  Q+ C+ EA+  F  M+  G+     
Sbjct: 345 SGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDET 404

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           +L+S +S+C  L  + LG+ IH    +  L  +V +S  L+ +Y   G +   L+VF+ M
Sbjct: 405 ALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAM 464

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
            E    +WN+VI   A + + V +++  + DM++ G  PN +TF+ +L A     +   G
Sbjct: 465 EEKGVSTWNAVILGLAMNGS-VEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDG 523

Query: 479 -HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            H  ++ + ++ +         ++   G+ G + + E++   M    D  +W +++
Sbjct: 524 RHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALL 579



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 191/446 (42%), Gaps = 77/446 (17%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD---SRSVFRFMIGKDSVSWNTMI 329
           R  K++    I +GL       + L+N  +   T+     S  +F  +   ++ +WNT++
Sbjct: 17  RHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPNTFTWNTIM 76

Query: 330 SG-LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
              L       +A++++           +++    L  CA+      G+Q+H   +  G 
Sbjct: 77  RAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGF 136

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           D DV V N L++LYA  G +    +VF   P  D VSWN+++  +  +   V EA + + 
Sbjct: 137 DGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQA-GEVEEAERVFE 195

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            M                                           T   N++++ +G+ G
Sbjct: 196 GMPE---------------------------------------RNTIASNSMIALFGRKG 216

Query: 509 EMDDCEKIFARMSER-RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
            ++   +IF  +  R RD VSW++M+S Y  NE+  +A+ L   M   G  +D     + 
Sbjct: 217 CVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSA 276

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD------- 620
           LSAC+ V  +E G  VH   V+  +E  V + +AL+ +YS CG I  A R FD       
Sbjct: 277 LSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLD 336

Query: 621 -------------------------LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
                                     MP ++V SW++MISGYA+H    +AL LF +M+L
Sbjct: 337 LISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQL 396

Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEG 681
            G  PD    V  +SAC+H   +D G
Sbjct: 397 HGVRPDETALVSAISACTHLATLDLG 422



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 117/469 (24%), Positives = 196/469 (41%), Gaps = 94/469 (20%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNS------------------ 51
           ++ +     D+   NTL+  YV+ G++  A ++F+ MP+RN+                  
Sbjct: 161 RVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEK 220

Query: 52  ---------------VSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRAC 96
                          VSW+ +VS Y    M  EA  +F EM  +G  ++   + S L AC
Sbjct: 221 ARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSAC 280

Query: 97  QECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE-IETRDL 155
                   + G  VH L +K        + N LI +Y SC E  D ARRIF++  E  DL
Sbjct: 281 SRV--LNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVD-ARRIFDDGGELLDL 337

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL 215
           ISWNS+IS Y + G       LF  M  +                               
Sbjct: 338 ISWNSMISGYLRCGSIQDAEMLFYSMPEK------------------------------- 366

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV----------VSM 265
                         D+   SA++SG+A+   F  A  +F++M    V          +S 
Sbjct: 367 --------------DVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISA 412

Query: 266 NGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
              +     GK +H Y+ R+ L   V +   L++MY KCG ++++  VF  M  K   +W
Sbjct: 413 CTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTW 472

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL- 384
           N +I GL  NG  E+++  F  M++ G + +  + +  L +C  +G +  G+      + 
Sbjct: 473 NAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIH 532

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           +  +++++     ++ L   AG L    ++   MP   D  +W +++GA
Sbjct: 533 EHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGA 581



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 123/266 (46%), Gaps = 13/266 (4%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G   D+   N++I+ Y+R G +  A  LF  MP+++ VSW+ ++SGY      +EA  +F
Sbjct: 332 GELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALF 391

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
           +EM   G   +  AL S + AC     +    G  +H  + ++    + ++S  LI MY 
Sbjct: 392 QEMQLHGVRPDETALVSAISACTHL--ATLDLGKWIHAYISRNKLQVNVILSTTLIDMYM 449

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
            C    + A  +F  +E + + +WN++I   +  G       +F+ M++ G      PNE
Sbjct: 450 KC-GCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTG----TVPNE 504

Query: 195 YTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK 252
            TF  ++ A     L   G +      +M+ +  + +++     +V    R G    A +
Sbjct: 505 ITFMGVLGACRHMGLVNDGRHYFN---SMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEE 561

Query: 253 IFEQM-IQKNVVSMNGLMEGRRKGKE 277
           + + M +  +V +   L+   RK ++
Sbjct: 562 LIDSMPMAPDVATWGALLGACRKHRD 587



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 90/207 (43%), Gaps = 13/207 (6%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  I ++    +V L  TLI++Y++ G + +A ++F  M ++   +W  ++ G   
Sbjct: 422 GKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAM 481

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG---PSGFKFGMQVHCLVLKSNQT 120
            G   ++  MF +M + G + N      VL AC+  G        F   +H   +++N  
Sbjct: 482 NGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIK 541

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
             G + ++L    G      +    I       D+ +W +++    +  D     ++  R
Sbjct: 542 HYGCMVDLL----GRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDN----EMGER 593

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSS 207
           + R+  +  L+P+   F  L++  Y+S
Sbjct: 594 LGRKLIQ--LQPDHDGFHVLLSNIYAS 618


>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
 gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
          Length = 863

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 252/762 (33%), Positives = 403/762 (52%), Gaps = 54/762 (7%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A  +F+ +   D++SWN+++S Y QRG       LF  M R G    + P+  TF  L+ 
Sbjct: 102 AVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRG----VSPDRTTFAVLLK 157

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
           +   S L    L  Q+ A+  K GL  D+  GSALV  + +  +   A   F  M ++N 
Sbjct: 158 SC--SALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNW 215

Query: 263 VSMNGLMEG-----------------------------------------RRKGKEVHGY 281
           VS    + G                                            G+++H +
Sbjct: 216 VSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAH 275

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
            I++       VG  +V++YAK  ++ D+R  F  +      + N M+ GL + G   EA
Sbjct: 276 AIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEA 335

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +  F  M R  +     SL    S+CA       GQQ+H   +K G D D+ V+NA+L L
Sbjct: 336 MGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDL 395

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y     L     +F  M + D VSWN++I A  +      + + ++ +M R G  P+  T
Sbjct: 396 YGKCKALMEAYLIFQGMKQKDSVSWNAIIAAL-EQNGHYDDTILHFNEMLRFGMKPDDFT 454

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           + ++L A ++    + G  VH +VIK  + ++  + + ++  Y KCG +D+ +K+  R+ 
Sbjct: 455 YGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG 514

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
            ++  VSWN+++SG+  N+   +A      M+  G + DHFTFATVL  CA++AT+E G 
Sbjct: 515 GQQ-VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGK 573

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           ++H   ++  +  D  I S LVDMY+KCG +  +   F+ +  R+  SWN+MI GYA HG
Sbjct: 574 QIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHG 633

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
            G +AL +F +M+ +  +P+H TFV VL ACSH GL D+G ++F  M+  Y L PQLE F
Sbjct: 634 LGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHF 693

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFE 760
           +CMVD+LGR+    +  +FIN MP   +++IW+T+L  C  R +    EL   A+N+L  
Sbjct: 694 ACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELA--ASNVLL- 750

Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           ++P ++  Y+LL+N+YA  GKW DV++ R+ +K+  +KKE GCSW+ ++  +H F+ GD+
Sbjct: 751 LDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDK 810

Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQT-KFALFDLEPESKE 861
           +HP    +YE L +L  +M+ +GY P +  F   D E  + E
Sbjct: 811 AHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEVDEEGSAPE 852



 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 196/655 (29%), Positives = 326/655 (49%), Gaps = 54/655 (8%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           NT++  Y   GD+++A  LFD MPD + VSW  +VSGY  +GM  E+  +F EM R G  
Sbjct: 87  NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 146

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
            +R     +L++C          G+QVH L +K+    D    + L+ MYG C  S D A
Sbjct: 147 PDRTTFAVLLKSCSAL--EELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKC-RSLDDA 203

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
              F  +  R+ +SW + I+   Q    +   +LF  MQR G   S       F S   A
Sbjct: 204 LCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRS--CA 261

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK----------- 252
           A S + +G    +Q+ A   K    SD  VG+A+V  +A+  +   AR+           
Sbjct: 262 AMSCLNTG----RQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVE 317

Query: 253 --------------------IFEQMIQK----NVVSMNGLM------EGRRKGKEVHGYL 282
                               +F+ MI+     +VVS++G+       +G  +G++VH   
Sbjct: 318 TSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLA 377

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
           I+SG    + V N ++++Y KC  + ++  +F+ M  KDSVSWN +I+ L+QNG Y++ I
Sbjct: 378 IKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTI 437

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
           ++F  M R G+   +F+  S L +CA+L  +  G  +H + +K GL SD  V++ ++ +Y
Sbjct: 438 LHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMY 497

Query: 403 ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
              G +    K+   +     VSWN+++  F+ ++    EA K++ +M   G  P+  TF
Sbjct: 498 CKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKE-SEEAQKFFSEMLDMGLKPDHFTF 556

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
             +L   ++ +  +LG Q+H Q+IK  + ++  I + L+  Y KCG+M D   +F ++ E
Sbjct: 557 ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKV-E 615

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
           +RD VSWN+MI GY  + L  +A+ +   M +     +H TF  VL AC+ V   + G  
Sbjct: 616 KRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCR 675

Query: 583 -VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMIS 635
             H       LE  +   + +VD+  +      A +F + MP + +   W +++S
Sbjct: 676 YFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730



 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 150/571 (26%), Positives = 254/571 (44%), Gaps = 75/571 (13%)

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM------------- 328
           ++ SG      V N L+ MYA+C     +R VF  M  +D+VSWNTM             
Sbjct: 43  MVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTA 102

Query: 329 ------------------ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
                             +SG  Q G ++E++  F  M R G+     +    L SC++L
Sbjct: 103 VALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSAL 162

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
             + LG Q+H   +K GL+ DV   +AL+ +Y     L   L  F+ MPE + VSW + I
Sbjct: 163 EELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAI 222

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
                +E  V   ++ +++M+R G   +  ++ +   + ++ S    G Q+HA  IK   
Sbjct: 223 AGCVQNEQYV-RGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKF 281

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
           +++  +  A++  Y K   + D  + F  +     E S N+M+ G +   L  +AM L  
Sbjct: 282 SSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS-NAMMVGLVRAGLGIEAMGLFQ 340

Query: 551 FMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCG 610
           FM++   R D  + + V SACA      +G +VH   +++  + D+ + +A++D+Y KC 
Sbjct: 341 FMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCK 400

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
            +  A   F  M  ++  SWN++I+   ++GH D  +  F++M   G  PD  T+  VL 
Sbjct: 401 ALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLK 460

Query: 671 ACSHAGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF--------- 720
           AC+    ++ G   H K +    GL       S +VD+  + G +D+ ++          
Sbjct: 461 ACAALRSLEYGLMVHDKVIKS--GLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQV 518

Query: 721 -----------INK--------------MPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
                      +NK              M + P+   + TVL  C  AN    ELG++  
Sbjct: 519 VSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTC--ANLATIELGKQIH 576

Query: 756 NMLFEMEPQNAVNYV--LLANMYASGGKWED 784
             + + E  +   Y+   L +MYA  G   D
Sbjct: 577 GQIIKQEMLDD-EYISSTLVDMYAKCGDMPD 606



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/569 (25%), Positives = 249/569 (43%), Gaps = 52/569 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   +K G   DV   + L+++Y +   L  A   F  MP+RN VSW   ++G       
Sbjct: 172 HALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQY 231

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
               ++F EM R G  +++ +  S  R+C     S    G Q+H   +K+  + D +V  
Sbjct: 232 VRGLELFIEMQRLGLGVSQPSYASAFRSC--AAMSCLNTGRQLHAHAIKNKFSSDRVVGT 289

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            ++ +Y      TD ARR F  +    + + N+++    + G  I    LF  M R   R
Sbjct: 290 AIVDVYAKANSLTD-ARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIR 348

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           + +     +   + +A   +   G +  QQ+  +  K+G   D+ V +A++  + +    
Sbjct: 349 FDV----VSLSGVFSACAET--KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKAL 402

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------------- 274
             A  IF+ M QK+ VS N ++    +                                 
Sbjct: 403 MEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKAC 462

Query: 275 --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                   G  VH  +I+SGL     V + +V+MY KCG ID+++ +   + G+  VSWN
Sbjct: 463 AALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWN 522

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            ++SG   N   EEA   F  M   GL   +F+  + L +CA+L  I LG+QIHG+ +K 
Sbjct: 523 AILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQ 582

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
            +  D  +S+ L+ +YA  G +   L VF  + + D VSWN++I  +A    L  EA++ 
Sbjct: 583 EMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYA-LHGLGVEALRM 641

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYG 505
           +  M++    PN  TF+ +L A S   +   G    H     Y +  +      ++   G
Sbjct: 642 FERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILG 701

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           +     +  K    M  + D V W +++S
Sbjct: 702 RSKGPQEAVKFINSMPFQADAVIWKTLLS 730



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 108/198 (54%), Gaps = 7/198 (3%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           + H +++K G   D F+ +T++++Y + G +  A KL D +  +  VSW  I+SG++   
Sbjct: 473 MVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNK 532

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
            S EA K F EM+  G   + +   +VL  C     +  + G Q+H  ++K     D  +
Sbjct: 533 ESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL--ATIELGKQIHGQIIKQEMLDDEYI 590

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           S+ L+ MY  C +  D +  +FE++E RD +SWN++I  Y+  G  +   ++F RMQ+E 
Sbjct: 591 SSTLVDMYAKCGDMPD-SLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKE- 648

Query: 186 FRYSLKPNEYTFGSLITA 203
              ++ PN  TF +++ A
Sbjct: 649 ---NVVPNHATFVAVLRA 663



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H QI+K     D ++ +TL+++Y + GD+  +  +F+++  R+ VSW  ++ GY   
Sbjct: 573 KQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALH 632

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G+  EA +MF+ M +   + N     +VLRAC   G
Sbjct: 633 GLGVEALRMFERMQKENVVPNHATFVAVLRACSHVG 668


>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 252/762 (33%), Positives = 403/762 (52%), Gaps = 54/762 (7%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A  +F+ +   D++SWN+++S Y QRG       LF  M R G    + P+  TF  L+ 
Sbjct: 102 AVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRG----VSPDRTTFAVLLK 157

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
           +   S L    L  Q+ A+  K GL  D+  GSALV  + +  +   A   F  M ++N 
Sbjct: 158 SC--SALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNW 215

Query: 263 VSMNGLMEG-----------------------------------------RRKGKEVHGY 281
           VS    + G                                            G+++H +
Sbjct: 216 VSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAH 275

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
            I++       VG  +V++YAK  ++ D+R  F  +      + N M+ GL + G   EA
Sbjct: 276 AIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEA 335

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +  F  M R  +     SL    S+CA       GQQ+H   +K G D D+ V+NA+L L
Sbjct: 336 MGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDL 395

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y     L     +F  M + D VSWN++I A  +      + + ++ +M R G  P+  T
Sbjct: 396 YGKCKALMEAYLIFQGMKQKDSVSWNAIIAAL-EQNGHYDDTILHFNEMLRFGMKPDDFT 454

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           + ++L A ++    + G  VH +VIK  + ++  + + ++  Y KCG +D+ +K+  R+ 
Sbjct: 455 YGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG 514

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
            ++  VSWN+++SG+  N+   +A      M+  G + DHFTFATVL  CA++AT+E G 
Sbjct: 515 GQQ-VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGK 573

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           ++H   ++  +  D  I S LVDMY+KCG +  +   F+ +  R+  SWN+MI GYA HG
Sbjct: 574 QIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHG 633

Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
            G +AL +F +M+ +  +P+H TFV VL ACSH GL D+G ++F  M+  Y L PQLE F
Sbjct: 634 LGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHF 693

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFE 760
           +CMVD+LGR+    +  +FIN MP   +++IW+T+L  C  R +    EL   A+N+L  
Sbjct: 694 ACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELA--ASNVLL- 750

Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           ++P ++  Y+LL+N+YA  GKW DV++ R+ +K+  +KKE GCSW+ ++  +H F+ GD+
Sbjct: 751 LDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDK 810

Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQT-KFALFDLEPESKE 861
           +HP    +YE L +L  +M+ +GY P +  F   D E  + E
Sbjct: 811 AHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEVDEEGSAPE 852



 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 196/655 (29%), Positives = 326/655 (49%), Gaps = 54/655 (8%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           NT++  Y   GD+++A  LFD MPD + VSW  +VSGY  +GM  E+  +F EM R G  
Sbjct: 87  NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 146

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
            +R     +L++C          G+QVH L +K+    D    + L+ MYG C  S D A
Sbjct: 147 PDRTTFAVLLKSCSAL--EELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKC-RSLDDA 203

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
              F  +  R+ +SW + I+   Q    +   +LF  MQR G   S       F S   A
Sbjct: 204 LCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRS--CA 261

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK----------- 252
           A S + +G    +Q+ A   K    SD  VG+A+V  +A+  +   AR+           
Sbjct: 262 AMSCLNTG----RQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVE 317

Query: 253 --------------------IFEQMIQK----NVVSMNGLM------EGRRKGKEVHGYL 282
                               +F+ MI+     +VVS++G+       +G  +G++VH   
Sbjct: 318 TSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLA 377

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
           I+SG    + V N ++++Y KC  + ++  +F+ M  KDSVSWN +I+ L+QNG Y++ I
Sbjct: 378 IKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTI 437

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
           ++F  M R G+   +F+  S L +CA+L  +  G  +H + +K GL SD  V++ ++ +Y
Sbjct: 438 LHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMY 497

Query: 403 ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
              G +    K+   +     VSWN+++  F+ ++    EA K++ +M   G  P+  TF
Sbjct: 498 CKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKE-SEEAQKFFSEMLDMGLKPDHFTF 556

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
             +L   ++ +  +LG Q+H Q+IK  + ++  I + L+  Y KCG+M D   +F ++ E
Sbjct: 557 ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKV-E 615

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
           +RD VSWN+MI GY  + L  +A+ +   M +     +H TF  VL AC+ V   + G  
Sbjct: 616 KRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCR 675

Query: 583 -VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMIS 635
             H       LE  +   + +VD+  +      A +F + MP + +   W +++S
Sbjct: 676 YFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 150/571 (26%), Positives = 254/571 (44%), Gaps = 75/571 (13%)

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM------------- 328
           ++ SG      V N L+ MYA+C     +R VF  M  +D+VSWNTM             
Sbjct: 43  MVVSGFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTA 102

Query: 329 ------------------ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
                             +SG  Q G ++E++  F  M R G+     +    L SC++L
Sbjct: 103 VALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSAL 162

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
             + LG Q+H   +K GL+ DV   +AL+ +Y     L   L  F+ MPE + VSW + I
Sbjct: 163 EELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAI 222

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
                +E  V   ++ +++M+R G   +  ++ +   + ++ S    G Q+HA  IK   
Sbjct: 223 AGCVQNEQYV-RGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKF 281

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
           +++  +  A++  Y K   + D  + F  +     E S N+M+ G +   L  +AM L  
Sbjct: 282 SSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS-NAMMVGLVRAGLGIEAMGLFQ 340

Query: 551 FMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCG 610
           FM++   R D  + + V SACA      +G +VH   +++  + D+ + +A++D+Y KC 
Sbjct: 341 FMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCK 400

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
            +  A   F  M  ++  SWN++I+   ++GH D  +  F++M   G  PD  T+  VL 
Sbjct: 401 ALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLK 460

Query: 671 ACSHAGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF--------- 720
           AC+    ++ G   H K +    GL       S +VD+  + G +D+ ++          
Sbjct: 461 ACAALRSLEYGLMVHDKVIKS--GLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQV 518

Query: 721 -----------INK--------------MPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
                      +NK              M + P+   + TVL  C  AN    ELG++  
Sbjct: 519 VSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTC--ANLATIELGKQIH 576

Query: 756 NMLFEMEPQNAVNYV--LLANMYASGGKWED 784
             + + E  +   Y+   L +MYA  G   D
Sbjct: 577 GQIIKQEMLDD-EYISSTLVDMYAKCGDMPD 606



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/569 (25%), Positives = 249/569 (43%), Gaps = 52/569 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   +K G   DV   + L+++Y +   L  A   F  MP+RN VSW   ++G       
Sbjct: 172 HALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQY 231

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
               ++F EM R G  +++ +  S  R+C     S    G Q+H   +K+  + D +V  
Sbjct: 232 VRGLELFIEMQRLGLGVSQPSYASAFRSC--AAMSCLNTGRQLHAHAIKNKFSSDRVVGT 289

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            ++ +Y      TD ARR F  +    + + N+++    + G  I    LF  M R   R
Sbjct: 290 AIVDVYAKANSLTD-ARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIR 348

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           + +     +   + +A   +   G +  QQ+  +  K+G   D+ V +A++  + +    
Sbjct: 349 FDV----VSLSGVFSACAET--KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKAL 402

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------------- 274
             A  IF+ M QK+ VS N ++    +                                 
Sbjct: 403 MEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKAC 462

Query: 275 --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                   G  VH  +I+SGL     V + +V+MY KCG ID+++ +   + G+  VSWN
Sbjct: 463 AALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWN 522

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            ++SG   N   EEA   F  M   GL   +F+  + L +CA+L  I LG+QIHG+ +K 
Sbjct: 523 AILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQ 582

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
            +  D  +S+ L+ +YA  G +   L VF  + + D VSWN++I  +A    L  EA++ 
Sbjct: 583 EMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYA-LHGLGVEALRM 641

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYG 505
           +  M++    PN  TF+ +L A S   +   G    H     Y +  +      ++   G
Sbjct: 642 FERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILG 701

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           +     +  K    M  + D V W +++S
Sbjct: 702 RSKGPQEAVKFINSMPFQADAVIWKTLLS 730



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 108/198 (54%), Gaps = 7/198 (3%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           + H +++K G   D F+ +T++++Y + G +  A KL D +  +  VSW  I+SG++   
Sbjct: 473 MVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNK 532

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
            S EA K F EM+  G   + +   +VL  C     +  + G Q+H  ++K     D  +
Sbjct: 533 ESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL--ATIELGKQIHGQIIKQEMLDDEYI 590

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           S+ L+ MY  C +  D +  +FE++E RD +SWN++I  Y+  G  +   ++F RMQ+E 
Sbjct: 591 SSTLVDMYAKCGDMPD-SLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKE- 648

Query: 186 FRYSLKPNEYTFGSLITA 203
              ++ PN  TF +++ A
Sbjct: 649 ---NVVPNHATFVAVLRA 663



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H QI+K     D ++ +TL+++Y + GD+  +  +F+++  R+ VSW  ++ GY   
Sbjct: 573 KQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALH 632

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G+  EA +MF+ M +   + N     +VLRAC   G
Sbjct: 633 GLGVEALRMFERMQKENVVPNHATFVAVLRACSHVG 668


>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g56690, mitochondrial; Flags: Precursor
 gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
 gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 246/708 (34%), Positives = 386/708 (54%), Gaps = 63/708 (8%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVG 294
           +++VSG+   G    AR++F++M ++NVVS NGL+ G  K + +   +    +F+++   
Sbjct: 52  NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMI---VEARNVFELMPER 108

Query: 295 N-----GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
           N      +V  Y + G + ++ S+F  M  ++ VSW  M  GL  +G  ++A   +  M 
Sbjct: 109 NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMP 168

Query: 350 -RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
            +D + S+N      +      G +   + I  E      + +V     +++ Y     +
Sbjct: 169 VKDVVASTNM-----IGGLCREGRVDEARLIFDEMR----ERNVVTWTTMITGYRQNNRV 219

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
               K+F +MPE  +VSW S++  +  S                 G   +   F  ++  
Sbjct: 220 DVARKLFEVMPEKTEVSWTSMLLGYTLS-----------------GRIEDAEEFFEVMPM 262

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
               +                        NA++  +G+ GE+    ++F  M E RD  +
Sbjct: 263 KPVIAC-----------------------NAMIVGFGEVGEISKARRVFDLM-EDRDNAT 298

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           W  MI  Y       +A++L   M ++G R    +  ++LS CA++A+L+ G +VHA  V
Sbjct: 299 WRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLV 358

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
           R   + DV + S L+ MY KCG +  A   FD    +++  WNS+ISGYA HG G++AL 
Sbjct: 359 RCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALK 418

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           +F +M   G +P+ VT + +L+ACS+AG ++EG + F+SM   + + P +E +SC VD+L
Sbjct: 419 IFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDML 478

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
           GRAG++DK  E I  M I P++ +W  +LGAC      + +L   AA  LFE EP NA  
Sbjct: 479 GRAGQVDKAMELIESMTIKPDATVWGALLGAC--KTHSRLDLAEVAAKKLFENEPDNAGT 536

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD-ESHPEKDL 827
           YVLL+++ AS  KW DVA  RK M+   V K  GCSW+ +   VH+F  G  ++HPE+ +
Sbjct: 537 YVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAM 596

Query: 828 IYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIR 886
           I   L++ +  +R+AGY P     L D++ E K D +S HSE++AVA+ L +  + +PIR
Sbjct: 597 ILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIR 656

Query: 887 IMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +MKNLRVCGDCH+A K ISK+  REI+LRD+NRFHHFN+G+CSC DYW
Sbjct: 657 VMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 136/546 (24%), Positives = 226/546 (41%), Gaps = 93/546 (17%)

Query: 23  CNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGF 82
           C+  I+   R+G +  A K FD +  +   SW  IVSGY   G+  EA ++F EM     
Sbjct: 20  CSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERN- 78

Query: 83  LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC 142
                                          V+  N    G + N +I            
Sbjct: 79  -------------------------------VVSWNGLVSGYIKNRMIVE---------- 97

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-QREGFRYSLKPNEYTFGSLI 201
           AR +FE +  R+++SW +++  Y Q G       LF RM +R    +++      FG LI
Sbjct: 98  ARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTV-----MFGGLI 152

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
                      Y +  +           D+   + ++ G  R G    AR IF++M ++N
Sbjct: 153 DDGRIDKARKLYDMMPV----------KDVVASTNMIGGLCREGRVDEARLIFDEMRERN 202

Query: 262 VVSMNGLMEGRRKGKEVH----------------------GYLIRSGLFDM--------- 290
           VV+   ++ G R+   V                       GY +   + D          
Sbjct: 203 VVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPM 262

Query: 291 --VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
             V   N ++  + + G I  +R VF  M  +D+ +W  MI   ++ G   EA+  F  M
Sbjct: 263 KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQM 322

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           ++ G+  S  SLIS LS CA+L  +  G+Q+H   ++   D DV V++ L+++Y   G L
Sbjct: 323 QKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGEL 382

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
            +   VF      D + WNS+I  +A S  L  EA+K + +M  +G  PN VT I IL A
Sbjct: 383 VKAKLVFDRFSSKDIIMWNSIISGYA-SHGLGEEALKIFHEMPSSGTMPNKVTLIAILTA 441

Query: 469 ASSFSMGKLGHQV-HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
            S     + G ++  +   K+ V       +  +   G+ G++D   ++   M+ + D  
Sbjct: 442 CSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDAT 501

Query: 528 SWNSMI 533
            W +++
Sbjct: 502 VWGALL 507



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 123/253 (48%), Gaps = 10/253 (3%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           V  CN +I  +  VG+++ A ++FD M DR++ +W  ++  Y  KG   EA  +F +M +
Sbjct: 265 VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQK 324

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
            G   +  +L S+L  C     +  ++G QVH  +++     D  V++VL+ MY  C E 
Sbjct: 325 QGVRPSFPSLISILSVCATL--ASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGEL 382

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
              A+ +F+   ++D+I WNSIIS Y+  G      K+F  M   G      PN+ T  +
Sbjct: 383 VK-AKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSG----TMPNKVTLIA 437

Query: 200 LITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           ++TA +Y+  L     L+   +M  K  +   +   S  V    R G    A ++ E M 
Sbjct: 438 ILTACSYAGKLEEG--LEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMT 495

Query: 259 QKNVVSMNGLMEG 271
            K   ++ G + G
Sbjct: 496 IKPDATVWGALLG 508



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 126/272 (46%), Gaps = 26/272 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  KL+ +  +K     DV     +I    R G +  A  +FDEM +RN V+W  +++GY
Sbjct: 159 KARKLYDMMPVK-----DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGY 213

Query: 62  THKGMSNEACKMFKEMV-RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
                 + A K+F+ M  +         LG  L    E     F+  M +  ++      
Sbjct: 214 RQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEV-MPMKPVI------ 266

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
                 N +I  +G   E +  ARR+F+ +E RD  +W  +I  Y ++G  +    LF++
Sbjct: 267 ----ACNAMIVGFGEVGEISK-ARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQ 321

Query: 181 MQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           MQ++G R S       F SLI+  +  + L+     +Q+ A + +     D+YV S L++
Sbjct: 322 MQKQGVRPS-------FPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMT 374

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
            + + G    A+ +F++   K+++  N ++ G
Sbjct: 375 MYVKCGELVKAKLVFDRFSSKDIIMWNSIISG 406



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 53/93 (56%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +++  F  DV++ + L+ +YV+ G+L  A  +FD    ++ + W  I+SGY   G+ 
Sbjct: 354 HAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLG 413

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            EA K+F EM  +G + N+  L ++L AC   G
Sbjct: 414 EEALKIFHEMPSSGTMPNKVTLIAILTACSYAG 446



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 97/230 (42%), Gaps = 45/230 (19%)

Query: 607 SKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFV 666
           S+ G+I+ A +FFD +  + + SWNS++SGY  +G   +A  LF +M       + V++ 
Sbjct: 28  SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER----NVVSWN 83

Query: 667 GVLSACSHAGLVDEGFKHFKSMSQ------------------------VYGLIPQLEQFS 702
           G++S      ++ E    F+ M +                        ++  +P+  + S
Sbjct: 84  GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143

Query: 703 CMVDLLG--RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR-KAANMLF 759
             V   G    G +DK  +  + MP+  + +    ++G  CR        GR   A ++F
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMMPVK-DVVASTNMIGGLCRE-------GRVDEARLIF 195

Query: 760 -EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
            EM  +N V +  +   Y    +   V  ARK  +    K E   SW +M
Sbjct: 196 DEMRERNVVTWTTMITGYRQNNR---VDVARKLFEVMPEKTEV--SWTSM 240


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 258/811 (31%), Positives = 425/811 (52%), Gaps = 68/811 (8%)

Query: 186 FRYSLKPNEYTFGSLITAAYSSVL---SGSYLLQQILAMVKKAGLLSDLY---VG----- 234
            R S+K   YT   L  A ++S+L     ++L   ++A   K GL+ D Y   +G     
Sbjct: 111 LRLSVK---YTDIDLARALHASILKLGEDTHLGNAVIAAYIKLGLVVDAYEVFMGMSTPD 167

Query: 235 ----SALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLMEG------RRKGKEVHG 280
               SAL+S F++L     A ++F +M    I+ N  S   ++           G +VH 
Sbjct: 168 VVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQVHA 227

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
             I+ G   +V V N L+ +Y KCG +D +  +F  M  +D  SWNTMIS L +   YE+
Sbjct: 228 LAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEK 287

Query: 341 AIMNFCAMRRD-GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           A+  F  + ++ G  +  F+L + L++CA     + G++IH   +++GL++++SVSNA++
Sbjct: 288 ALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAII 347

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD---------------------SEA 438
             Y   G L+    +F  MP  D ++W  +I A+ +                       A
Sbjct: 348 GFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNA 407

Query: 439 LVS---------EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           L++         +A+  ++ M + G      T   ++ A       ++  Q+H  +IK+ 
Sbjct: 408 LLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFG 467

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMS-ERRDEVSWNSMISGYIHNELLPKAMNL 548
             +   IE AL+    KCG MDD +++F  +S +  + +   SMI GY  N L  +A+ L
Sbjct: 468 FRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAICL 527

Query: 549 VWFMMQRGQR-LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
            +     G   LD   F ++L  C ++   E G ++H   ++     ++ +G++++ MYS
Sbjct: 528 FYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMYS 587

Query: 608 KCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVG 667
           KC  ID A + F+ MP  +V SWN +I+G   H  GD+AL ++S M+  G  PD +TFV 
Sbjct: 588 KCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVL 647

Query: 668 VLSA--CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
           ++SA   + + L+DE    F SM  ++ L P  E ++ +V +LG  G L++ EE INKMP
Sbjct: 648 IVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWGLLEEAEELINKMP 707

Query: 726 ITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
             P   +WR +L  C   AN   T +G++ A  +  MEP++   YVL++N+YA+ G+W  
Sbjct: 708 FDPEVSVWRALLDGCRLHAN---TSIGKRVAKHIIGMEPRDPSTYVLVSNLYAASGRWHC 764

Query: 785 VAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGY 844
               R+ M++  ++K    SWV +K  +H F A D+SHP+ + IY  L  L  K   AGY
Sbjct: 765 SEMVRENMRDRGLRKHPCRSWVIIKKQLHTFYARDKSHPQSNDIYSGLDILILKCLKAGY 824

Query: 845 VPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKF 903
            P   F L ++E + K+D + YHS K+A  + +L      PIR++KN+ +C DCH+  K+
Sbjct: 825 EPDMSFVLQEVEEQQKKDFLFYHSAKLAATYGLLKTRPGEPIRVVKNILLCRDCHTFLKY 884

Query: 904 ISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            + +  REI+ RD++ FH F++G+CSC  YW
Sbjct: 885 ATVVTQREIIFRDASGFHCFSNGQCSCKGYW 915



 Score =  196 bits (498), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 159/615 (25%), Positives = 283/615 (46%), Gaps = 99/615 (16%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H  ILK G   D  L N +I  Y+++G +  A ++F  M   + VS++ ++S ++ 
Sbjct: 123 ARALHASILKLG--EDTHLGNAVIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALISSFSK 180

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                EA ++F  M  +G   N Y+  ++L AC        + G+QVH L +K   +   
Sbjct: 181 LNRETEAIQLFFRMRISGIEPNEYSFVAILTACIR--SLELEMGLQVHALAIKLGYSQLV 238

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-Q 182
            V+N LI +YG C    D A  +F+E+  RD+ SWN++IS   +        +LF  + Q
Sbjct: 239 FVANALIGLYGKC-GCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQ 297

Query: 183 REGFRYSLKPNEYTFGSLITAAY--SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
            +GF    K +++T  +L+TA     + + G    ++I A   + GL ++L V +A++  
Sbjct: 298 NKGF----KADQFTLSTLLTACARCHARIQG----REIHAYAIRIGLENNLSVSNAIIGF 349

Query: 241 FARLGNFYYARKIFE-------------------------------QMIQKNVVSMNGLM 269
           + R G+  +   +FE                               +M +KN VS N L+
Sbjct: 350 YTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALL 409

Query: 270 EGRRKGKE-----------------------------------------VHGYLIRSGLF 288
            G  K  E                                         +HG++I+ G  
Sbjct: 410 TGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFR 469

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMI--GKDSVSWNTMISGLDQNGCYEEAIMNFC 346
               +   L++M +KCG +DD+  +F+ +   G +S+   +MI G  +NG  EEAI  F 
Sbjct: 470 SNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFY 529

Query: 347 AMRRDGLMS-SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             + +G M     +  S L  C +LG+  +G+QIH + LK G  +++ V N+++S+Y+  
Sbjct: 530 RCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMYSKC 589

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVI-GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
             +   +K F  MP HD VSWN +I G     +    EA+  +  M +AG  P+ +TF+ 
Sbjct: 590 YNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQG--DEALAIWSSMEKAGIKPDAITFV- 646

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVAN--ETTIEN--ALLSCYGKCGEMDDCEKIFARM 520
           ++ +A  F+   L  +  +  +   + +  E T E+  +L+   G  G +++ E++  +M
Sbjct: 647 LIVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWGLLEEAEELINKM 706

Query: 521 SERRDEVSWNSMISG 535
               +   W +++ G
Sbjct: 707 PFDPEVSVWRALLDG 721


>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
 gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 646

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 234/609 (38%), Positives = 339/609 (55%), Gaps = 55/609 (9%)

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL----KVFFLMPEHDQVSWNSVIGAF 433
           QIH   +K G   D   +  +L   A +    R L    K+F  MP+ +  SWN++I  F
Sbjct: 41  QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100

Query: 434 ADSE---ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
           ++S+   AL++  + Y + M      PN  TF ++L A +     + G Q+H   +KY  
Sbjct: 101 SESDEDKALIAITLFYEM-MSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGF 159

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFAR---------MSERRDE--------------- 526
             +  + + L+  Y  CG M D   +F +         M++RR                 
Sbjct: 160 GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYM 219

Query: 527 --------------------VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
                               VSWN+MISGY  N     A+ +   M +   R ++ T  +
Sbjct: 220 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVS 279

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           VL A + + +LE G  +H     + +  D V+GSAL+DMYSKCG I+ A   F+ +P  N
Sbjct: 280 VLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPREN 339

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
           V +W++MI+G+A HG    A+  F +M+  G  P  V ++ +L+ACSH GLV+EG ++F 
Sbjct: 340 VITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFS 399

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
            M  V GL P++E + CMVDLLGR+G LD+ EEFI  MPI P+ +IW+ +LGAC      
Sbjct: 400 QMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG-- 457

Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
             E+G++ AN+L +M P ++  YV L+NMYAS G W +V++ R  MKE +++K+ GCS +
Sbjct: 458 NVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLI 517

Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSY 866
            +   +H FV  D+SHP+   I   L E++ K+R AGY P T   L +LE E KE+++ Y
Sbjct: 518 DIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHY 577

Query: 867 HSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFND 925
           HSEKIA AF L   S   PIRI+KNLR+C DCHS+ K ISK+  R+I +RD  RFHHF D
Sbjct: 578 HSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQD 637

Query: 926 GKCSCGDYW 934
           G CSC DYW
Sbjct: 638 GSCSCMDYW 646



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 218/435 (50%), Gaps = 35/435 (8%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSC---LESTDCARRIFEEIETRDLISWNSIISVY 165
           Q+H + +KS Q  D L +  ++    +        D A +IF ++  R+  SWN+II  +
Sbjct: 41  QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100

Query: 166 SQRGD--TISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAM 221
           S+  +   +    LF  M  + F   ++PN +TF S++ A   +  +  G    +QI  +
Sbjct: 101 SESDEDKALIAITLFYEMMSDEF---VEPNRFTFPSVLKACAKTGKIQEG----KQIHGL 153

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIF-EQMIQKNVVSMNGLMEGRRKGKEVHG 280
             K G   D +V S LV  +   G    AR +F + +I+K++V    +M  RRK      
Sbjct: 154 ALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMV----VMTDRRK------ 203

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
              R G    + + N +++ Y + G    +R +F  M  +  VSWNTMISG   NG +++
Sbjct: 204 ---RDG---EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           A+  F  M++  +  +  +L+S L + + LG + LG+ +H      G+  D  + +AL+ 
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +Y+  G + + + VF  +P  + ++W+++I  FA       +A+  +  MR+AG  P+ V
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFA-IHGQAGDAIDCFCKMRQAGVRPSDV 376

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFA 518
            +IN+L A S   + + G +  +Q++  +   E  IE+   ++   G+ G +D+ E+   
Sbjct: 377 AYINLLTACSHGGLVEEGRRYFSQMVSVD-GLEPRIEHYGCMVDLLGRSGLLDEAEEFIL 435

Query: 519 RMSERRDEVSWNSMI 533
            M  + D+V W +++
Sbjct: 436 NMPIKPDDVIWKALL 450



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 194/452 (42%), Gaps = 82/452 (18%)

Query: 35  DLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE--ACKMFKEMVRAGFL-LNRYALGS 91
           DL  A K+F++MP RN  SW  I+ G++         A  +F EM+   F+  NR+   S
Sbjct: 74  DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133

Query: 92  VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC--------------- 136
           VL+AC + G    + G Q+H L LK     D  V + L+ MY  C               
Sbjct: 134 VLKACAKTGK--IQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNII 191

Query: 137 ---------------------------LESTDC--ARRIFEEIETRDLISWNSIISVYSQ 167
                                      +   DC  AR +F+++  R ++SWN++IS YS 
Sbjct: 192 EKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSL 251

Query: 168 RG---DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
            G   D + VF       RE  +  ++PN  T  S++ A   S L    L + +    + 
Sbjct: 252 NGFFKDAVEVF-------REMKKGDIRPNYVTLVSVLPAI--SRLGSLELGEWLHLYAED 302

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG----RRKGKEVHG 280
           +G+  D  +GSAL+  +++ G    A  +FE++ ++NV++ + ++ G     + G  +  
Sbjct: 303 SGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDC 362

Query: 281 Y--LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLD 333
           +  + ++G+         L+   +  G +++ R  F  M+  D +      +  M+  L 
Sbjct: 363 FCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLG 422

Query: 334 QNGCYEEA---IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           ++G  +EA   I+N      D +        + L +C   G + +G+++    + + +  
Sbjct: 423 RSGLLDEAEEFILNMPIKPDDVIWK------ALLGACRMQGNVEMGKRVANILMDM-VPH 475

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
           D     AL ++YA  G  S   ++   M E D
Sbjct: 476 DSGAYVALSNMYASQGNWSEVSEMRLRMKEKD 507



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 151/333 (45%), Gaps = 19/333 (5%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           ++ L N +I+ Y+R+GD  +A  LFD+M  R+ VSW  ++SGY+  G   +A ++F+EM 
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           +     N   L SVL A    G    + G  +H     S    D ++ + LI MY  C  
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLG--SLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKC-G 323

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             + A  +FE +   ++I+W+++I+ ++  G        F +M++ G R    P++  + 
Sbjct: 324 IIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR----PSDVAYI 379

Query: 199 SLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK-IFE 255
           +L+TA      V  G     Q   MV   GL   +     +V    R G    A + I  
Sbjct: 380 NLLTACSHGGLVEEGRRYFSQ---MVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILN 436

Query: 256 QMIQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDS 310
             I+ + V    L+   R +G    G  + + L DMV   +G    L NMYA  G   + 
Sbjct: 437 MPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEV 496

Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
            S  R  + +  +  +   S +D +G   E ++
Sbjct: 497 -SEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVV 528



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 48/94 (51%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            HL     G   D  L + LI++Y + G +  A  +F+ +P  N ++W+ +++G+   G 
Sbjct: 296 LHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQ 355

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           + +A   F +M +AG   +  A  ++L AC   G
Sbjct: 356 AGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGG 389


>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Glycine max]
          Length = 916

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 268/881 (30%), Positives = 436/881 (49%), Gaps = 96/881 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDE--MPDRNSVSWACIVSGYTHKG 65
           H  ++K G     F    LI++Y +   L  A  +F     P  ++VSW  ++SGY   G
Sbjct: 70  HSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAG 129

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
           + +EA  +F +M R   + ++ AL +VL A    G                         
Sbjct: 130 LPHEALHIFDKM-RNSAVPDQVALVTVLNAYISLG------------------------- 163

Query: 126 SNVLIAMYGSCLESTDCARRIFEE--IETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
                          D A ++F++  I  R++++WN +IS +++          F +M +
Sbjct: 164 -------------KLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSK 210

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G    +K +  T  S+++A  S       LL  + A   K G  S +YV S+L++ + +
Sbjct: 211 HG----VKSSRSTLASVLSAIASLAALNHGLL--VHAHAIKQGFESSIYVASSLINMYGK 264

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLM---------------------------------- 269
                 AR++F+ + QKN++  N ++                                  
Sbjct: 265 CQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSI 324

Query: 270 -------EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                  E    G+++H  +I+      + V N L++MYAK G + ++   F  M  +D 
Sbjct: 325 LSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDH 384

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           +SWN +I G  Q      A   F  M  DG++    SL S LS+C ++  +  GQQ H  
Sbjct: 385 ISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCL 444

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            +KLGL++++   ++L+ +Y+  G +    K +  MPE   VS N++I  +A       E
Sbjct: 445 SVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKN--TKE 502

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV-ANETTIENALL 501
           ++    +M+  G  P+ +TF +++      +   LG Q+H  ++K  +      +  +LL
Sbjct: 503 SINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLL 562

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
             Y     + D   +F+  S  +  V W ++ISG+I NE    A+NL   M       D 
Sbjct: 563 GMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQ 622

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD- 620
            TF TVL ACA +++L  G E+H+       + D +  SALVDMY+KCG +  + + F+ 
Sbjct: 623 ATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEE 682

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
           L   ++V SWNSMI G+A++G+   AL +F +M      PD VTF+GVL+ACSHAG V E
Sbjct: 683 LATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYE 742

Query: 681 GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC 740
           G + F  M   YG+ P+++ ++CMVDLLGR G L + EEFI+K+ + PN++IW  +LGAC
Sbjct: 743 GRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGAC 802

Query: 741 CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKE 800
                 K   G++AA  L E+EPQ++  YVLL+NMYA+ G W++    R+ M + +++K 
Sbjct: 803 RIHGDEKR--GQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRTMIKKDIQKI 860

Query: 801 AGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
            GCSW+ +    ++FVAGD SH   D I + LK L   ++D
Sbjct: 861 PGCSWIVVGQETNLFVAGDISHSSYDEISKALKHLTALIKD 901



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 230/927 (24%), Positives = 406/927 (43%), Gaps = 95/927 (10%)

Query: 54  WACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCL 113
           W   V G  H   S    + +   + +G   +++     L AC +        G  VH  
Sbjct: 16  WNWRVQGTKHYS-SERVLQFYASFMNSGHSPDQFTFAVTLSACAKL--QNLHLGRAVHSC 72

Query: 114 VLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDL--ISWNSIISVYSQRGDT 171
           V+KS           LI +Y  C  S  CAR IF       L  +SW ++IS Y Q G  
Sbjct: 73  VIKSGLESTSFCQGALIHLYAKC-NSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLP 131

Query: 172 ISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLS 229
                +F +M     R S  P++    +++ A  S   +     L QQ+   ++      
Sbjct: 132 HEALHIFDKM-----RNSAVPDQVALVTVLNAYISLGKLDDACQLFQQMPIPIR------ 180

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRRKGKEVH 279
           ++   + ++SG A+  ++  A   F QM +           +V+S    +     G  VH
Sbjct: 181 NVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVH 240

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
            + I+ G    + V + L+NMY KC   DD+R VF  +  K+ + WN M+    QNG   
Sbjct: 241 AHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLS 300

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
             +  F  M   G+    F+  S LS+CA   ++ +G+Q+H   +K    S++ V+NAL+
Sbjct: 301 NVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALI 360

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
            +YA AG L    K F  M   D +SWN++I  +   E + + A   +  M   G  P+ 
Sbjct: 361 DMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEE-VEAGAFSLFRRMILDGIVPDE 419

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           V+  +IL+A  +  + + G Q H   +K  +       ++L+  Y KCG++ D  K ++ 
Sbjct: 420 VSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSS 479

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           M E R  VS N++I+GY       +++NL+  M   G +    TFA+++  C   A +  
Sbjct: 480 MPE-RSVVSVNALIAGYALKN-TKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVIL 537

Query: 580 GMEVHACGV--RACLEFDVVIGSALVDMYSKCGRIDYASRFF-DLMPVRNVYSWNSMISG 636
           G+++H C +  R  L     +G++L+ MY    R+  A+  F +   ++++  W ++ISG
Sbjct: 538 GLQIH-CAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISG 596

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-----------HAGLVDEGF--- 682
           + ++   D AL L+ +M+ +   PD  TFV VL AC+           H+ +   GF   
Sbjct: 597 HIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLD 656

Query: 683 --------KHFKSMSQVYGLIPQLEQFSCMVDLL------------GRAGELDKIEEFIN 722
                     +     V   +   E+ +   D++            G A    K+ + + 
Sbjct: 657 ELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMT 716

Query: 723 KMPITPNSLIWRTVLGACCRANCRKTELGRKAANML---FEMEPQNAVNYVLLANMYASG 779
           +  ITP+ + +  VL AC  A       GR+  +++   + +EP+   +Y  + ++    
Sbjct: 717 QSCITPDDVTFLGVLTACSHAGWVYE--GRQIFDVMVNYYGIEPR-VDHYACMVDLL--- 770

Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
           G+W  + +A + + + EV+  A   W  +     +   GDE   ++    +KL EL  + 
Sbjct: 771 GRWGFLKEAEEFIDKLEVEPNAMI-WANLLGACRIH--GDEKRGQR--AAKKLIELEPQS 825

Query: 840 RDAGYVPQTKFAL---FDLEPESKEDLVSYHSEKIAVAFVLTRNSKLPIRIMKNLRVCGD 896
                +    +A    +D     +  ++    +KI         S + +    NL V GD
Sbjct: 826 SSPYVLLSNMYAASGNWDEARSLRRTMIKKDIQKIPGC------SWIVVGQETNLFVAGD 879

Query: 897 C-HSAFKFISKIVGR-EIVLRDSNRFH 921
             HS++  ISK +     +++D+NRF 
Sbjct: 880 ISHSSYDEISKALKHLTALIKDNNRFQ 906



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 144/573 (25%), Positives = 261/573 (45%), Gaps = 56/573 (9%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           L H   +K GF   +++ ++LIN+Y +      A ++FD +  +N + W  ++  Y+  G
Sbjct: 238 LVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNG 297

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
             +   ++F +M+  G   + +   S+L  C  C     + G Q+H  ++K   T +  V
Sbjct: 298 FLSNVMELFLDMISCGIHPDEFTYTSILSTC-ACFEY-LEVGRQLHSAIIKKRFTSNLFV 355

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           +N LI MY       +  +  FE +  RD ISWN+II  Y Q       F LF RM  +G
Sbjct: 356 NNALIDMYAKAGALKEAGKH-FEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDG 414

Query: 186 FRYSLKPNEYTFGSLITAAYS-SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
               + P+E +  S+++A  +  VL      QQ   +  K GL ++L+ GS+L+  +++ 
Sbjct: 415 ----IVPDEVSLASILSACGNIKVLEAG---QQFHCLSVKLGLETNLFAGSSLIDMYSKC 467

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRR------------------------------- 273
           G+   A K +  M +++VVS+N L+ G                                 
Sbjct: 468 GDIKDAHKTYSSMPERSVVSVNALIAGYALKNTKESINLLHEMQILGLKPSEITFASLID 527

Query: 274 ---------KGKEVHGYLIRSGLF-DMVAVGNGLVNMYAKCGTIDDSRSVF-RFMIGKDS 322
                     G ++H  +++ GL      +G  L+ MY     + D+  +F  F   K  
Sbjct: 528 VCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSI 587

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           V W  +ISG  QN C + A+  +  MR + +     + ++ L +CA L  +  G++IH  
Sbjct: 588 VMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSL 647

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF-FLMPEHDQVSWNSVIGAFADSEALVS 441
               G D D   S+AL+ +YA  G +   ++VF  L  + D +SWNS+I  FA +     
Sbjct: 648 IFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKN-GYAK 706

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENAL 500
            A+K + +M ++  +P+ VTF+ +L A S       G Q+   ++  Y +         +
Sbjct: 707 CALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACM 766

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           +   G+ G + + E+   ++    + + W +++
Sbjct: 767 VDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLL 799



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/272 (21%), Positives = 109/272 (40%), Gaps = 56/272 (20%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSV-SWACIVSGY 61
           D +  H  I   GF  D    + L+++Y + GD+ S+ ++F+E+  +  V SW  ++ G+
Sbjct: 640 DGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGF 699

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G +  A K+F EM ++    +      VL AC   G             V +  Q F
Sbjct: 700 AKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAG------------WVYEGRQIF 747

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D     V++  YG               IE R        +  Y+   D +  +      
Sbjct: 748 D-----VMVNYYG---------------IEPR--------VDHYACMVDLLGRWGFLKEA 779

Query: 182 QREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAG----LLSDLYVGS 235
           +    +  ++PN   + +L+ A   +     G    ++++ +  ++     LLS++Y  S
Sbjct: 780 EEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMYAAS 839

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
                    GN+  AR +   MI+K++  + G
Sbjct: 840 ---------GNWDEARSLRRTMIKKDIQKIPG 862


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 272/836 (32%), Positives = 428/836 (51%), Gaps = 75/836 (8%)

Query: 158 WNSIISVYSQRG--DTISVFKLFSRMQREGF---RYSLKPNEYTFGSLITAAYSSVLSGS 212
           WN++++ +S+ G                EG    R++L P   + G L   A ++     
Sbjct: 32  WNALLADHSRAGRHADALALLPPLLAASEGIAPDRFTLPPAARSCGFLRVGAAAAG---- 87

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ--KNVVSMNGLM- 269
              +Q+ A+  K GL  D +VG++LVS + R G    A K+F  +    +N+VS N LM 
Sbjct: 88  ---RQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMA 144

Query: 270 ----EGRR-----------------------------------KGKEVHGYLIRSGLFDM 290
               + RR                                    G+ VHG   +SG    
Sbjct: 145 ALSGDPRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAP 204

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR- 349
             VGN LV+MYAKCG + D+   F        VSWN M+    +N    EA   F  +R 
Sbjct: 205 ARVGNALVDMYAKCGELADAERAFPE--APSVVSWNVMLGAYTRN---REAGAAFGLLRD 259

Query: 350 -----RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS-DVSVSNALLSLYA 403
                   + +   +++S L +C+    +   +++H   ++ GLD+    V NAL++ Y 
Sbjct: 260 MQIKEHGSVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYG 319

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA-GWSPNGVTF 462
             G L    +VF  +      SWN++I A A      + A++ ++ M  A G  P+G + 
Sbjct: 320 RCGRLLHADRVFTDIRRKTVSSWNTLISAHAQQN--TAAAIELFIQMTNACGLKPDGFSI 377

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
            ++L A +           H  +++  +  +T I  +LLS Y +C   +   ++     E
Sbjct: 378 GSLLMACADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAME 437

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ-RGQRLDHFTFATVLSACASVATLERGM 581
            + EV W +MISGY  N L  +++ L   M    G      +  + L AC+ ++++  G 
Sbjct: 438 EKGEVLWIAMISGYSQNGLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRLGK 497

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV-YSWNSMISGYARH 640
           E+H   ++A L  D  + S+L+DMYSKCG ++ A  FFD +  R+   SW +MI+GYA +
Sbjct: 498 EMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVN 557

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP-QLE 699
           G G +A+ L+ +M+ +G  PD  T++G+L AC HAG+++EG + F  M   +  I  +LE
Sbjct: 558 GLGREAVELYGKMRREGMEPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHHHKIEVKLE 617

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            +SC++ +L RAG        + +MP  P++ I  +VL AC      + ELG   A  L 
Sbjct: 618 HYSCVIGMLSRAGRFADAVALMAEMPQEPDAKILSSVLSACHIHG--EAELGSDVAERLL 675

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           E+EP  A +YVL +NMYA   +W+D+ K RK +++A + KE GCSW+ +   V+ FVAG+
Sbjct: 676 ELEPDKAEHYVLASNMYAGSRRWDDMRKVRKMLRDAGIAKEPGCSWIDVAGKVYSFVAGE 735

Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR 879
             HPE + +    + L +++R+ GYVP T   L +LE E K + + +HSEK AV F L R
Sbjct: 736 NPHPEMEQVRGMWRSLEERIREIGYVPDTTVVLHELEEEEKVEALWWHSEKQAVTFGLLR 795

Query: 880 N-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             +   +R+ KN+R+C DCH+A + ISK+ GR+IV+RD  RFHHF  G CSCGDYW
Sbjct: 796 TATPATVRVFKNIRMCKDCHNAARLISKVTGRDIVVRDKKRFHHFRGGICSCGDYW 851



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 157/587 (26%), Positives = 267/587 (45%), Gaps = 62/587 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVSGYT 62
           +  H    K G   D F+ N+L+++Y R G +  A K+F  +PD  RN VSW  +++  +
Sbjct: 88  RQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAALS 147

Query: 63  HKGMSNEACKMFKE-MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
             G      ++F++ +V  G +++   L +VL  C   G S  + G  VH L  KS    
Sbjct: 148 --GDPRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWS--ETGRAVHGLAAKSGWDA 203

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V N L+ MY  C E  D A R F E  +  ++SWN ++  Y++  +  + F L   M
Sbjct: 204 PARVGNALVDMYAKCGELAD-AERAFPEAPS--VVSWNVMLGAYTRNREAGAAFGLLRDM 260

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL-LSDLYVGSALVSG 240
           Q +    S+  +E T  S++ A   S  +    L+++ A   + GL  +   V +ALV+ 
Sbjct: 261 QIKE-HGSVPADEITVLSVLPAC--SGPTELSRLRELHAFTVRRGLDAASDKVPNALVAA 317

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG------------------------- 275
           + R G   +A ++F  + +K V S N L+    +                          
Sbjct: 318 YGRCGRLLHADRVFTDIRRKTVSSWNTLISAHAQQNTAAAIELFIQMTNACGLKPDGFSI 377

Query: 276 ----------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD-SRSVFRFMI 318
                           K  HG+++R+GL     +   L++ Y +C   +  +R +F  M 
Sbjct: 378 GSLLMACADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAME 437

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR-DGLMSSNFSLISTLSSCASLGWIMLGQ 377
            K  V W  MISG  QNG   E++  F  M+  +G  SS  S  S L +C+ L  + LG+
Sbjct: 438 EKGEVLWIAMISGYSQNGLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRLGK 497

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD-QVSWNSVIGAFADS 436
           ++H   LK  L  D  +S++L+ +Y+  G++      F  +   D +VSW ++I  +A  
Sbjct: 498 EMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYA-V 556

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
             L  EAV+ Y  MRR G  P+  T++ +L A     M + G +   ++  ++   E  +
Sbjct: 557 NGLGREAVELYGKMRREGMEPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHHHKIEVKL 616

Query: 497 EN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNE 540
           E+   ++    + G   D   + A M +  D    +S++S  +IH E
Sbjct: 617 EHYSCVIGMLSRAGRFADAVALMAEMPQEPDAKILSSVLSACHIHGE 663



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 219/485 (45%), Gaps = 66/485 (13%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S+  +  H    K G+     + N L+++Y + G+LA A + F E P  + VSW  ++  
Sbjct: 186 SETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFPEAP--SVVSWNVMLGA 243

Query: 61  YTHKGMSNEACKMFKEMV---RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
           YT    +  A  + ++M          +   + SVL AC   GP+      ++H   ++ 
Sbjct: 244 YTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACS--GPTELSRLRELHAFTVRR 301

Query: 118 N-QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
                   V N L+A YG C      A R+F +I  + + SWN++IS ++Q+ +T +  +
Sbjct: 302 GLDAASDKVPNALVAAYGRCGRLLH-ADRVFTDIRRKTVSSWNTLISAHAQQ-NTAAAIE 359

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL--QQILAMVKKAGLLSDLYVG 234
           LF +M        LKP+ ++ GSL+ A         +LL  +     + + GL  D  + 
Sbjct: 360 LFIQMTNA---CGLKPDGFSIGSLLMACADP----KHLLHVKATHGFILRNGLERDTVIR 412

Query: 235 SALVSGFARLGNF-YYARKIFEQMIQKNVV---------SMNGL-------------MEG 271
           ++L+S + R     Y AR +F+ M +K  V         S NGL             +EG
Sbjct: 413 ASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSVEG 472

Query: 272 R--------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
                                R GKE+H + +++ L D   + + L++MY+KCG ++D+R
Sbjct: 473 HCSSVISATSALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDAR 532

Query: 312 SVFRFMIGKDS-VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
           + F  +  +D+ VSW  MI+G   NG   EA+  +  MRR+G+    F+ +  L +C   
Sbjct: 533 TFFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMRREGMEPDEFTYLGLLMACGHA 592

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSN--ALLSLYADAGYLSRCLKVFFLMP-EHDQVSWN 427
           G +  G +   E        +V + +   ++ + + AG  +  + +   MP E D    +
Sbjct: 593 GMLEEGLRFFDEMRNHHHKIEVKLEHYSCVIGMLSRAGRFADAVALMAEMPQEPDAKILS 652

Query: 428 SVIGA 432
           SV+ A
Sbjct: 653 SVLSA 657


>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 663

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/560 (38%), Positives = 337/560 (60%), Gaps = 6/560 (1%)

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           QQ+H   +  GL    S+   L+SL   AG ++   ++F  +P  D   ++S++      
Sbjct: 108 QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLL-KVTSK 166

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
                + V +Y  M  +G   +  TF +++ A +  S  +LG ++H+ V+     ++  +
Sbjct: 167 FGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYV 226

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
           + AL++ Y K  +M   +K+F  M +R   ++WNS+ISGY  N L  +++ L   MM+ G
Sbjct: 227 QAALIALYAKASDMKVAKKVFDAMPQR-TIIAWNSLISGYDQNGLPQESIGLFHLMMESG 285

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
            + D  T  ++LS+C+ +  L+ G  +H        + +VV+G++L++MY++CG +  A 
Sbjct: 286 FQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAR 345

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
             FD M  RNV +W +MISGY  HG+G +A+ LF++M+  GP P+++TFV VLSAC+H+G
Sbjct: 346 EVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSG 405

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK-MPITPNSLIWRT 735
           L+D+G + F SM + YGL+P +E   CMVD+ GRAG L+   +FI K +P  P   +W +
Sbjct: 406 LIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTS 465

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           +LGA CR + R  +LG K A  +  +EP+N  +YV+L+N+YA  G+ + V   R  M   
Sbjct: 466 MLGA-CRMH-RNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRR 523

Query: 796 EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
            +KK+ G S + +    ++F  GD+SHP+ + IY  L EL  +  ++GYVP  +  + DL
Sbjct: 524 RLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDL 583

Query: 856 EPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
           E E ++  + YHSEK+A+AF +L  N    IRI+KNLR+C DCHSA K IS I  REI++
Sbjct: 584 EEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIV 643

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RD  RFHHF DG CSC DYW
Sbjct: 644 RDKFRFHHFKDGSCSCLDYW 663



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 208/445 (46%), Gaps = 34/445 (7%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R  ++VH ++I SGL    ++   L+++    G+I  +R +F  +   DS  +++++   
Sbjct: 105 RNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVT 164

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            + G   + ++ +  M   G   SN++  S + +CA L  + LG++IH   +  G  SD+
Sbjct: 165 SKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDM 224

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V  AL++LYA A  +    KVF  MP+   ++WNS+I  + D   L  E++  +  M  
Sbjct: 225 YVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGY-DQNGLPQESIGLFHLMME 283

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           +G+ P+  T +++L++ S       G  +H             +  +L++ Y +CG +  
Sbjct: 284 SGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSK 343

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
             ++F  M E R+ V+W +MISGY  +    +AM L   M   G R ++ TF  VLSACA
Sbjct: 344 AREVFDSMKE-RNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACA 402

Query: 573 SVATLERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF-DLMPVRN 626
               ++ G  V      A G+   +E +V     +VDM+ + G ++ A +F    +P   
Sbjct: 403 HSGLIDDGRRVFSSMKEAYGLVPGVEHNV----CMVDMFGRAGLLNDAYQFIKKFIPKEP 458

Query: 627 VYS-WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
             + W SM+     H + D                     +GV  A     +  E   H+
Sbjct: 459 GPAVWTSMLGACRMHRNFD---------------------LGVKVAEHVLSVEPENPGHY 497

Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGR 710
             +S +Y L  ++++   + +++ R
Sbjct: 498 VMLSNIYALAGRMDRVEMVRNMMTR 522



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 148/301 (49%), Gaps = 8/301 (2%)

Query: 240 GFARLGNFYYARKIFEQMIQKN-----VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVG 294
           GF+     +Y R +F    Q N     V+     +   R GKE+H +++  G    + V 
Sbjct: 168 GFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQ 227

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
             L+ +YAK   +  ++ VF  M  +  ++WN++ISG DQNG  +E+I  F  M   G  
Sbjct: 228 AALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQ 287

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
             + +++S LSSC+ LG +  G  +H      G D +V +  +L+++Y   G +S+  +V
Sbjct: 288 PDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREV 347

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  M E + V+W ++I  +        +A++ + +MR  G  PN +TF+ +L+A +   +
Sbjct: 348 FDSMKERNVVTWTAMISGYG-MHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGL 406

Query: 475 GKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFAR-MSERRDEVSWNSM 532
              G +V + + + Y +         ++  +G+ G ++D  +   + + +      W SM
Sbjct: 407 IDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSM 466

Query: 533 I 533
           +
Sbjct: 467 L 467



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 131/259 (50%), Gaps = 12/259 (4%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  ++  G+  D+++   LI +Y +  D+  A K+FD MP R  ++W  ++SGY  
Sbjct: 208 GKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQ 267

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+  E+  +F  M+ +GF  +   + S+L +C + G     FG  +H     +    + 
Sbjct: 268 NGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLG--ALDFGCWLHDYADGNGFDLNV 325

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           ++   LI MY  C  +   AR +F+ ++ R++++W ++IS Y   G      +LF+ M+ 
Sbjct: 326 VLGTSLINMYTRC-GNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMR- 383

Query: 184 EGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKA-GLLSDLYVGSALVSGF 241
               Y  +PN  TF ++++A A+S ++      +++ + +K+A GL+  +     +V  F
Sbjct: 384 ---AYGPRPNNITFVAVLSACAHSGLIDDG---RRVFSSMKEAYGLVPGVEHNVCMVDMF 437

Query: 242 ARLGNFYYARKIFEQMIQK 260
            R G    A +  ++ I K
Sbjct: 438 GRAGLLNDAYQFIKKFIPK 456



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 157/346 (45%), Gaps = 28/346 (8%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H  I+  G      L   LI++    G +  A +LF  +P+ +S  +  ++   
Sbjct: 105 RNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVT 164

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G S +    ++ M+ +G   + Y   SV++AC +   S  + G ++H  V+      
Sbjct: 165 SKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADL--SALRLGKEIHSHVMVCGYGS 222

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V   LIA+Y         A+++F+ +  R +I+WNS+IS Y Q G       LF  M
Sbjct: 223 DMYVQAALIALYAKA-SDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLM 281

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
              GF    +P+  T  SL+++   S L        +       G   ++ +G++L++ +
Sbjct: 282 MESGF----QPDSATIVSLLSSC--SQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMY 335

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------RKG----KEVHGYLIRSGLFDMV 291
            R GN   AR++F+ M ++NVV+   ++ G       R+      E+  Y  R      V
Sbjct: 336 TRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFV 395

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           AV    ++  A  G IDD R VF  M  K++     ++ G++ N C
Sbjct: 396 AV----LSACAHSGLIDDGRRVFSSM--KEAYG---LVPGVEHNVC 432


>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03880, mitochondrial; Flags: Precursor
 gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 214/540 (39%), Positives = 336/540 (62%), Gaps = 10/540 (1%)

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           N L+++Y     L+   ++F  MP+ + +SW ++I A++  + +  +A++  + M R   
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCK-IHQKALELLVLMLRDNV 158

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            PN  T+ ++L + +  S  ++   +H  +IK  + ++  + +AL+  + K GE +D   
Sbjct: 159 RPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS 215

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F  M    D + WNS+I G+  N     A+ L   M + G   +  T  +VL AC  +A
Sbjct: 216 VFDEMVTG-DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 274

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            LE GM+ H   V+   + D+++ +ALVDMY KCG ++ A R F+ M  R+V +W++MIS
Sbjct: 275 LLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS 332

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
           G A++G+  +AL LF +MK  G  P+++T VGVL ACSHAGL+++G+ +F+SM ++YG+ 
Sbjct: 333 GLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGID 392

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           P  E + CM+DLLG+AG+LD   + +N+M   P+++ WRT+LGA CR   R   L   AA
Sbjct: 393 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA-CRVQ-RNMVLAEYAA 450

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
             +  ++P++A  Y LL+N+YA+  KW+ V + R  M++  +KKE GCSW+ +   +H F
Sbjct: 451 KKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAF 510

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
           + GD SHP+   + +KL +L  ++   GYVP+T F L DLE E  ED + +HSEK+A+AF
Sbjct: 511 IIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAF 570

Query: 876 -VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            ++T   +  IRI KNLR+CGDCH   K  SK+  R IV+RD  R+HHF DGKCSCGDYW
Sbjct: 571 GLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 219/453 (48%), Gaps = 46/453 (10%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +G  +  +L  +G   M+ + N L+NMY K   ++D+  +F  M  ++ +SW TMIS   
Sbjct: 79  EGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYS 138

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           +   +++A+     M RD +  + ++  S L SC  +  +   + +H   +K GL+SDV 
Sbjct: 139 KCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVF 195

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V +AL+ ++A  G     L VF  M   D + WNS+IG FA + +    A++ +  M+RA
Sbjct: 196 VRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN-SRSDVALELFKRMKRA 254

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G+     T  ++L A +  ++ +LG Q H  ++KY+   +  + NAL+  Y KCG ++D 
Sbjct: 255 GFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDA 312

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            ++F +M E RD ++W++MISG   N    +A+ L   M   G + ++ T   VL AC+ 
Sbjct: 313 LRVFNQMKE-RDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSH 371

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
              LE G                         Y +  +     + + + PVR  Y    M
Sbjct: 372 AGLLEDGW-----------------------YYFRSMK-----KLYGIDPVREHYG--CM 401

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-HAGLVDEGFKHFKSMSQVY 692
           I    + G  D A+ L ++M+ +   PD VT+  +L AC     +V   +    +  +V 
Sbjct: 402 IDLLGKAGKLDDAVKLLNEMECE---PDAVTWRTLLGACRVQRNMVLAEY----AAKKVI 454

Query: 693 GLIPQ-LEQFSCMVDLLGRAGELDKIEEFINKM 724
            L P+    ++ + ++   + + D +EE   +M
Sbjct: 455 ALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRM 487



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 160/342 (46%), Gaps = 42/342 (12%)

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGK-------------- 276
           +++ + L++ + +      A ++F+QM Q+NV+S   ++    K K              
Sbjct: 96  MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155

Query: 277 ------------------------EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
                                    +H  +I+ GL   V V + L++++AK G  +D+ S
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS 215

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           VF  M+  D++ WN++I G  QN   + A+  F  M+R G ++   +L S L +C  L  
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
           + LG Q H   +K   D D+ ++NAL+ +Y   G L   L+VF  M E D ++W+++I  
Sbjct: 276 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVA 491
            A +     EA+K +  M+ +G  PN +T + +L A S   + + G      + K Y + 
Sbjct: 334 LAQN-GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGID 392

Query: 492 NETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
                   ++   GK G++DD  K+   M    D V+W +++
Sbjct: 393 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 10/212 (4%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D ++ H  I+K G   DVF+ + LI+V+ ++G+   A  +FDEM   +++ W  I+ G+ 
Sbjct: 177 DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
               S+ A ++FK M RAGF+  +  L SVLRAC   G +  + GMQ H  ++K +Q  D
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT--GLALLELGMQAHVHIVKYDQ--D 292

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            +++N L+ MY  C    D A R+F +++ RD+I+W+++IS  +Q G +    KLF RM+
Sbjct: 293 LILNNALVDMYCKCGSLED-ALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMK 351

Query: 183 REGFRYSLKPNEYTF-GSLITAAYSSVLSGSY 213
             G     KPN  T  G L   +++ +L   +
Sbjct: 352 SSG----TKPNYITIVGVLFACSHAGLLEDGW 379



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 131/253 (51%), Gaps = 16/253 (6%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           +FL N LIN+YV+   L  A +LFD+MP RN +SW  ++S Y+   +  +A ++   M+R
Sbjct: 96  MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
                N Y   SVLR+C     +G      +HC ++K     D  V + LI ++    E 
Sbjct: 156 DNVRPNVYTYSSVLRSC-----NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEP 210

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
            D A  +F+E+ T D I WNSII  ++Q   +    +LF RM+R GF       + T  S
Sbjct: 211 ED-ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGF----IAEQATLTS 265

Query: 200 LITAAYSSVLSGSYLLQQ-ILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           ++ A      +G  LL+  + A V       DL + +ALV  + + G+   A ++F QM 
Sbjct: 266 VLRAC-----TGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK 320

Query: 259 QKNVVSMNGLMEG 271
           +++V++ + ++ G
Sbjct: 321 ERDVITWSTMISG 333



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 132/316 (41%), Gaps = 68/316 (21%)

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG----MEVHACGVRACLEFDVV 597
           LP+AM  +  +   G   D  T++ ++  C S   +  G      ++  G R  +     
Sbjct: 42  LPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMM----F 97

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           + + L++MY K   ++ A + FD MP RNV SW +MIS Y++     KAL L   M  D 
Sbjct: 98  LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157

Query: 658 PLPDHVTFVGVLSACS--------HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
             P+  T+  VL +C+        H G++ EG +     S V+         S ++D+  
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLE-----SDVF-------VRSALIDVFA 205

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK---------------------- 747
           + GE +      ++M +T ++++W +++G   + N R                       
Sbjct: 206 KLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQ-NSRSDVALELFKRMKRAGFIAEQATL 263

Query: 748 TELGRKAANM-LFEMEPQNAVNYV----------LLANMYASGGKWEDVAKARKAMKEAE 796
           T + R    + L E+  Q  V+ V           L +MY   G  ED  +    MKE +
Sbjct: 264 TSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323

Query: 797 VKKEAGCSWVTMKDGV 812
           V      +W TM  G+
Sbjct: 324 V-----ITWSTMISGL 334


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 241/700 (34%), Positives = 375/700 (53%), Gaps = 41/700 (5%)

Query: 272 RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA--KCGTIDDSRSVFRFMIGKDSVSWNTMI 329
           ++  K++H +++R+GLF        L    A     ++D +  VF  +   +  +WNT+I
Sbjct: 43  KKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLI 102

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
                +    + ++ F  M  +     N ++    + +   +  ++ GQ IHG  +K   
Sbjct: 103 RAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASF 162

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
            SD+ +SN+L+  Y+  G L     VF  + E D VSWNS+I  F    +   EA++ + 
Sbjct: 163 GSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGS-PEEALQLFK 221

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            M+     PN VT + +L+A +     + G      + +  +     + NA+L  Y KCG
Sbjct: 222 RMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCG 281

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHN----------ELLPKAMNLVW-------- 550
            ++D  ++F +M E +D VSW +MI GY             +++P+     W        
Sbjct: 282 SLEDARRLFDKM-EEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQ 340

Query: 551 --------------FMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
                           + +  + +  T A+ L+ACA +  ++ G  +H    +  ++ + 
Sbjct: 341 QNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNF 400

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
            I ++L+DMYSKCG ++ A   F  +  R+V+ W++MI+G A HGHG  A+ LFS+M+  
Sbjct: 401 HITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQET 460

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
              P+ VTF  +L ACSH+GLVDEG   F  M  VYG++P  + ++CMVD+LGRAG L++
Sbjct: 461 KVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEE 520

Query: 717 IEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMY 776
             E I KMPI P++ +W  +LGAC        EL   A + L E +  N   YVLL+N+Y
Sbjct: 521 AVELIEKMPIVPSASVWGALLGACRIYG--NVELAEMACSRLLETDSNNHGAYVLLSNIY 578

Query: 777 ASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELN 836
           A  GKW+ V++ R+ MK + ++KE GCS + +   +H F+ GD SHP    IY KL E+ 
Sbjct: 579 AKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIV 638

Query: 837 QKMRDAGYVPQTKFALFDLEPE-SKEDLVSYHSEKIAVAFVLTR-NSKLPIRIMKNLRVC 894
            +++  GYV      L  +E E  KE  ++ HSEK+A+A+ L R     PIRI+KNLRVC
Sbjct: 639 ARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPSQPIRIVKNLRVC 698

Query: 895 GDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           GDCHS  K ISK+  R+I+LRD  RFHHF+ G CSC DYW
Sbjct: 699 GDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738



 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 135/537 (25%), Positives = 242/537 (45%), Gaps = 44/537 (8%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINV--YVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           K  K  H  +L+ G  +D      L           L  A K+FD++P  N  +W  ++ 
Sbjct: 44  KHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIR 103

Query: 60  GYTHKGMSNEACKMFKEMV-RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
            +       +   +F +M+  +    N Y    V++A  E   S    G  +H +V+K++
Sbjct: 104 AFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEV--SSLLAGQAIHGMVMKAS 161

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              D  +SN LI  Y S L   D A  +F +I  +D++SWNS+IS + Q G      +LF
Sbjct: 162 FGSDLFISNSLIHFYSS-LGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLF 220

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
            RM+ E  R    PN  T   +++A    +       +     +++ G+  +L + +A++
Sbjct: 221 KRMKMENAR----PNRVTMVGVLSACAKRI--DLEFGRWACDYIERNGIDINLILSNAML 274

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLV 298
             + + G+   AR++F++M +K++VS   +++G                           
Sbjct: 275 DMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDG--------------------------- 307

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN- 357
             YAK G  D +R VF  M  +D  +WN +IS   QNG  +EA+  F  ++ +     N 
Sbjct: 308 --YAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNE 365

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
            +L STL++CA LG + LG  IH    K G+  +  ++ +L+ +Y+  G+L + L+VF+ 
Sbjct: 366 VTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYS 425

Query: 418 MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
           +   D   W+++I   A        A+  +  M+     PN VTF N+L A S   +   
Sbjct: 426 VERRDVFVWSAMIAGLA-MHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDE 484

Query: 478 GHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           G     Q+   Y V   +     ++   G+ G +++  ++  +M        W +++
Sbjct: 485 GRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALL 541


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 261/826 (31%), Positives = 418/826 (50%), Gaps = 87/826 (10%)

Query: 97  QECGPS-GFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDL 155
           QEC      K G + H  ++ S  T    V+N LI MY  C  + + A ++FEE+  RD+
Sbjct: 32  QECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCC-ALEYAYKVFEEMPQRDI 90

Query: 156 ISWN--------------------------------SIISVYSQRGDTISVFKLFSRMQR 183
           +SWN                                S+IS Y Q GD      +F +M+ 
Sbjct: 91  VSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRD 150

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G  +    +  T    ++    S+L    L  QI  +  + G   D+  GSALV  +A+
Sbjct: 151 LGVMF----DHTTLA--VSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAK 204

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG-------------------------------- 271
             +   +  +F ++  KN +S +  + G                                
Sbjct: 205 CNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASV 264

Query: 272 ---------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                     R G ++H + +++     V VG   ++MYAKC  + D+  +F  +   + 
Sbjct: 265 FRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNL 324

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
            S+N MI G  +N    +A   F  ++++       SL   LS+ A +     G Q+HG 
Sbjct: 325 QSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGL 384

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            +K  L S++ V+NA+L +Y   G L     +F  M   D VSWN++I A   +E+   +
Sbjct: 385 AIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNES-EGK 443

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
            + ++  M R+   P+  T+ ++L A +       G +VH ++IK  +  +  + +AL+ 
Sbjct: 444 TLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVD 503

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            Y KCG M++ EKI  R+ E +  VSWN++ISG+   +    +      M++ G   D+F
Sbjct: 504 MYSKCGMMEEAEKIHYRL-EEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNF 562

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           T+ATVL  CA++AT+  G ++HA  ++  L  DV I S LVDMYSKCG +  +   F   
Sbjct: 563 TYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKA 622

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
           P R+  +WN+MI G+A HG G++AL LF  M  +   P+H TFV VL ACSH G   +G 
Sbjct: 623 PKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGL 682

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-C 741
            +F+ M+ +Y L PQLE +SCMVD+LGR+G++++    I  MP   +++IWRT+L  C  
Sbjct: 683 FYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKI 742

Query: 742 RANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA 801
           + N    E+  KAA+ L +++P+++  Y LL+N+YA  G W+ V+K R+ M+   +KKE 
Sbjct: 743 QGN---VEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEP 799

Query: 802 GCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQ 847
           GCSW+ +KD VH F+  D++HP+ ++IY  L  L   MR +G  P+
Sbjct: 800 GCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSGCAPE 845



 Score =  268 bits (686), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 186/709 (26%), Positives = 325/709 (45%), Gaps = 86/709 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSW-----AC 56
           K  K  H  ++  GF   VF+ N LI +YV+   L  A K+F+EMP R+ VSW      C
Sbjct: 41  KPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRDIVSWNTMVFGC 100

Query: 57  ---------------------------IVSGYTHKGMSNEACKMFKEMVRAGFLLNRYAL 89
                                      ++SGY   G   ++  +F +M   G + +   L
Sbjct: 101 AGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTL 160

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
              L+ C          G+Q+H + ++    +D +  + L+ MY  C  S + +  +F E
Sbjct: 161 AVSLKICSLLEDQ--VLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC-NSLEDSLDVFSE 217

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
           +  ++ ISW++ I+   Q    +   KLF  MQR+G   S    + T+ S+  +     L
Sbjct: 218 LPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVS----QSTYASVFRSCAG--L 271

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL- 268
           S S L  Q+     K    SD+ VG+A +  +A+  N   A K+F  +   N+ S N + 
Sbjct: 272 SASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMI 331

Query: 269 ----------------------------------------MEGRRKGKEVHGYLIRSGLF 288
                                                   ++G  +G ++HG  I+S L 
Sbjct: 332 IGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLS 391

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
             + V N +++MY KCG + ++  +F  M  +D VSWN +I+  +QN    + + +F AM
Sbjct: 392 SNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAM 451

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
            R  +    F+  S L +CA       G ++HG  +K G+   + V +AL+ +Y+  G +
Sbjct: 452 LRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMM 511

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
               K+ + + E   VSWN++I  F+  +    ++ +++  M   G  P+  T+  +L  
Sbjct: 512 EEAEKIHYRLEEQTMVSWNAIISGFSLQKK-SEDSQRFFSHMLEMGVEPDNFTYATVLDT 570

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
            ++ +   LG Q+HAQ+IK  + ++  I + L+  Y KCG M D   +F R + +RD V+
Sbjct: 571 CANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMF-RKAPKRDSVT 629

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM-EVHACG 587
           WN+MI G+ ++ L  +A+ L   M+    + +H TF +VL AC+ V   ++G+       
Sbjct: 630 WNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMA 689

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMIS 635
               LE  +   S +VD+  + G+++ A R    MP   +   W +++S
Sbjct: 690 SIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLS 738



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 119/481 (24%), Positives = 218/481 (45%), Gaps = 47/481 (9%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K   + ++ + N ++++Y + G L  AS LFDEM  R+ VSW  I++       
Sbjct: 381 LHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNES 440

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             +    F  M+R+    + +  GSVL+AC   G   F  GM+VH  ++KS       V 
Sbjct: 441 EGKTLSHFGAMLRSKMEPDEFTYGSVLKAC--AGQRAFSNGMEVHGRIIKSGMGLKMFVG 498

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L+ MY  C    + A +I   +E + ++SWN+IIS +S +  +    + FS M   G 
Sbjct: 499 SALVDMYSKCGMMEE-AEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMG- 556

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              ++P+ +T+ +++    +    G  L +QI A + K  LLSD+Y+ S LV  +++ GN
Sbjct: 557 ---VEPDNFTYATVLDTCANLATVG--LGKQIHAQMIKLELLSDVYITSTLVDMYSKCGN 611

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
            + +  +F +  +++ V+ N ++ G        +  E+  +++   +    A     V++
Sbjct: 612 MHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHAT---FVSV 668

Query: 301 YAKCGTIDDSRSVFRFMIGKDSV--------SWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
              C  + +++    +     S+         ++ M+  L ++G  EEA+     + +D 
Sbjct: 669 LRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEAL----RLIQDM 724

Query: 353 LMSSNFSLIST-LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
              ++  +  T LS C   G + + ++     LKL  + D S    L ++YADAG   + 
Sbjct: 725 PFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPE-DSSAYTLLSNIYADAGMWQQV 783

Query: 412 LKVFFLMPEHD-----QVSWNSVIG----------AFADSEALVSEAVKYYLDMRRAGWS 456
            K+   M  H+       SW  V            A    E + S       DMRR+G +
Sbjct: 784 SKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSGCA 843

Query: 457 P 457
           P
Sbjct: 844 P 844



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 111/248 (44%), Gaps = 33/248 (13%)

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC------------- 507
           TF +I    S+    K G + HA +I         + N L+  Y KC             
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 508 ------------------GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV 549
                             G M+  + +F  M    D VSWNS+ISGY+ N  + K++ + 
Sbjct: 86  PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145

Query: 550 WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
             M   G   DH T A  L  C+ +     G+++H   V+   ++DVV GSALVDMY+KC
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
             ++ +   F  +P +N  SW++ I+G  ++    + L LF +M+  G      T+  V 
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265

Query: 670 SACSHAGL 677
            +C  AGL
Sbjct: 266 RSC--AGL 271



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 13/205 (6%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q++K     DV++ +TL+++Y + G++  +  +F + P R+SV+W  ++ G+ + 
Sbjct: 581 KQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYH 640

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSG---FKFGMQVHCLVLKSNQTF 121
           G+  EA ++F+ M+      N     SVLRAC   G +    F F        L+     
Sbjct: 641 GLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEH 700

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              + ++L    G   +  +  R I +     D I W +++S+   +G+     K  S +
Sbjct: 701 YSCMVDIL----GRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSL 756

Query: 182 QREGFRYSLKPNEYTFGSLITAAYS 206
            +      L P + +  +L++  Y+
Sbjct: 757 LK------LDPEDSSAYTLLSNIYA 775



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 46/218 (21%)

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           TF+ +   C++   L+ G E HA  + +     V + + L+ MY KC  ++YA + F+ M
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 623 PVRNVYSWNSM--------------------------------ISGYARHGHGDKALTLF 650
           P R++ SWN+M                                ISGY ++G   K++ +F
Sbjct: 86  PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE------QFSCM 704
            +M+  G + DH T    L  CS   L+++         Q++G+  Q+         S +
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICS---LLEDQVLGI----QIHGIAVQMGFDYDVVTGSAL 198

Query: 705 VDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
           VD+  +   L+   +  +++P   N + W   +  C +
Sbjct: 199 VDMYAKCNSLEDSLDVFSELP-DKNWISWSAAIAGCVQ 235


>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Glycine max]
          Length = 721

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 243/691 (35%), Positives = 381/691 (55%), Gaps = 49/691 (7%)

Query: 250 ARKIFEQMIQKNV----VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
           AR IF+Q+   +V    + ++   +  R  + +   L R   F  V   N ++     CG
Sbjct: 74  ARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAID--LFRRIPFKDVVSWNSIIKGCLHCG 131

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            I  +R +F  M  +  VSW T++ GL + G  +EA   F AM                 
Sbjct: 132 DIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAME---------------- 175

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
                                 +D DV+  NA++  Y   G +   L++F  MP  D +S
Sbjct: 176 ---------------------PMDRDVAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVIS 214

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           W+S+I    D      +A+  + DM  +G   +    +  L+AA+     ++G Q+H  V
Sbjct: 215 WSSMIAGL-DHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSV 273

Query: 486 IKYNVAN-ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
            K    + +  +  +L++ Y  C +M+   ++F  +   +  V W ++++GY  N+   +
Sbjct: 274 FKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVV-YKSVVIWTALLTGYGLNDKHRE 332

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
           A+ +   MM+     +  +F + L++C  +  +ERG  +HA  V+  LE    +G +LV 
Sbjct: 333 ALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVV 392

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
           MYSKCG +  A   F  +  +NV SWNS+I G A+HG G  AL LF+QM  +G  PD +T
Sbjct: 393 MYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGIT 452

Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
             G+LSACSH+G++ +    F+   Q   +   +E ++ MVD+LGR GEL++ E  +  M
Sbjct: 453 VTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSM 512

Query: 725 PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
           P+  NS++W  +L AC + +    +L ++AAN +FE+EP  +  YVLL+N+YAS  +W +
Sbjct: 513 PMKANSMVWLALLSACRKHS--NLDLAKRAANQIFEIEPDCSAAYVLLSNLYASSSRWAE 570

Query: 785 VAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGY 844
           VA  R+ MK   V K+ G SW+T+K   H F++ D SHP  + IY+KL+ L  K+++ GY
Sbjct: 571 VALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAEKIYQKLEWLGVKLKELGY 630

Query: 845 VPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKF 903
           VP  +FAL D+E E KE+++SYHSE++A+AF +L+      I +MKNLRVCGDCH+A K 
Sbjct: 631 VPDQQFALHDVETEQKEEMLSYHSERLAIAFGLLSTVEGSAITVMKNLRVCGDCHNAIKL 690

Query: 904 ISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           ++KIV REIV+RDS+RFH F +G CSCGDYW
Sbjct: 691 MAKIVDREIVVRDSSRFHDFKNGICSCGDYW 721



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 192/433 (44%), Gaps = 56/433 (12%)

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR---------------------- 183
           +F  I  +D++SWNSII      GD ++  KLF  M R                      
Sbjct: 108 LFRRIPFKDVVSWNSIIKGCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEA 167

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSG-------SYLLQQILAMVKKAGLLSDLYVGSA 236
           E   ++++P +        AA+++++ G          LQ    M  +     D+   S+
Sbjct: 168 ETLFWAMEPMDRD-----VAAWNAMIHGYCSNGRVDDALQLFCQMPSR-----DVISWSS 217

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM----------EGRRKGKEVHGYLIRSG 286
           +++G    G    A  +F  M+   V   +G++             R G ++H  + + G
Sbjct: 218 MIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLG 277

Query: 287 --LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
              FD   V   LV  YA C  ++ +  VF  ++ K  V W  +++G   N  + EA+  
Sbjct: 278 DWHFDEF-VSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEV 336

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F  M R  ++ +  S  S L+SC  L  I  G+ IH   +K+GL+S   V  +L+ +Y+ 
Sbjct: 337 FGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSK 396

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
            GY+S  + VF  + E + VSWNSVI   A        A+  +  M R G  P+G+T   
Sbjct: 397 CGYVSDAVYVFKGINEKNVVSWNSVIVGCAQ-HGCGMWALALFNQMLREGVDPDGITVTG 455

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSE 522
           +L+A S   M +   +   +      +   TIE+  +++   G+CGE+++ E +   M  
Sbjct: 456 LLSACSHSGMLQKA-RCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPM 514

Query: 523 RRDEVSWNSMISG 535
           + + + W +++S 
Sbjct: 515 KANSMVWLALLSA 527



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 192/402 (47%), Gaps = 31/402 (7%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV   N +I+ Y   G +  A +LF +MP R+ +SW+ +++G  H G S +A  +F++MV
Sbjct: 180 DVAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMV 239

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLK-SNQTFDGLVSNVLIAMYGSCL 137
            +G  L+   L   L A  +     ++ G+Q+HC V K  +  FD  VS  L+  Y  C 
Sbjct: 240 ASGVCLSSGVLVCGLSAAAKI--PAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGC- 296

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
           +  + A R+F E+  + ++ W ++++ Y          ++F  M     R  + PNE +F
Sbjct: 297 KQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEM----MRIDVVPNESSF 352

Query: 198 GSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
            S + +      +  G    + I A   K GL S  YVG +LV  +++ G    A  +F+
Sbjct: 353 TSALNSCCGLEDIERG----KVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFK 408

Query: 256 QMIQKNVVSMNGLMEGRRK------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
            + +KNVVS N ++ G  +         +   ++R G+        GL++  +  G +  
Sbjct: 409 GINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQK 468

Query: 310 SRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           +R  FR+   K SV+     + +M+  L + G  EEA     +M    + +++   ++ L
Sbjct: 469 ARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSM---PMKANSMVWLALL 525

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADA 405
           S+C     + L ++   +  +  ++ D S +  LLS LYA +
Sbjct: 526 SACRKHSNLDLAKRAANQIFE--IEPDCSAAYVLLSNLYASS 565



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 167/392 (42%), Gaps = 82/392 (20%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV   N++I   +  GD+ +A KLFDEMP R  VSW  +V G    G+  EA  +F    
Sbjct: 116 DVVSWNSIIKGCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLF---- 171

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
                   +A+  + R                   V   N    G  SN           
Sbjct: 172 --------WAMEPMDRD------------------VAAWNAMIHGYCSN----------G 195

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS--------- 189
             D A ++F ++ +RD+ISW+S+I+     G +     LF  M   G   S         
Sbjct: 196 RVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLS 255

Query: 190 ------------------LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG--LLS 229
                              K  ++ F   ++A+  +  +G    +Q+ A  +  G  +  
Sbjct: 256 AAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGC---KQMEAACRVFGEVVYK 312

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV--------SMNGL--MEGRRKGKEVH 279
            + + +AL++G+        A ++F +M++ +VV        ++N    +E   +GK +H
Sbjct: 313 SVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIH 372

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
              ++ GL     VG  LV MY+KCG + D+  VF+ +  K+ VSWN++I G  Q+GC  
Sbjct: 373 AAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGM 432

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
            A+  F  M R+G+     ++   LS+C+  G
Sbjct: 433 WALALFNQMLREGVDPDGITVTGLLSACSHSG 464



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 119/256 (46%), Gaps = 11/256 (4%)

Query: 7   FHLQILKHG-FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
            H  + K G + +D F+  +L+  Y     + +A ++F E+  ++ V W  +++GY    
Sbjct: 269 IHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLND 328

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
              EA ++F EM+R   + N  +  S L +C  CG    + G  +H   +K      G V
Sbjct: 329 KHREALEVFGEMMRIDVVPNESSFTSALNSC--CGLEDIERGKVIHAAAVKMGLESGGYV 386

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
              L+ MY  C   +D A  +F+ I  ++++SWNS+I   +Q G  +    LF++M REG
Sbjct: 387 GGSLVVMYSKCGYVSD-AVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREG 445

Query: 186 FRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
               + P+  T   L++A ++S +L  +    +     +   L  + Y  +++V    R 
Sbjct: 446 ----VDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHY--TSMVDVLGRC 499

Query: 245 GNFYYARKIFEQMIQK 260
           G    A  +   M  K
Sbjct: 500 GELEEAEAVVMSMPMK 515



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 46/96 (47%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K+ H   +K G     ++  +L+ +Y + G ++ A  +F  + ++N VSW  ++ G    
Sbjct: 369 KVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQH 428

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G    A  +F +M+R G   +   +  +L AC   G
Sbjct: 429 GCGMWALALFNQMLREGVDPDGITVTGLLSACSHSG 464


>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 599

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/560 (38%), Positives = 337/560 (60%), Gaps = 6/560 (1%)

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           QQ+H   +  GL    S+   L+SL   AG ++   ++F  +P  D   ++S++      
Sbjct: 44  QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKV-TSK 102

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
                + V +Y  M  +G   +  TF +++ A +  S  +LG ++H+ V+     ++  +
Sbjct: 103 FGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYV 162

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
           + AL++ Y K  +M   +K+F  M +R   ++WNS+ISGY  N L  +++ L   MM+ G
Sbjct: 163 QAALIALYAKASDMKVAKKVFDAMPQR-TIIAWNSLISGYDQNGLPQESIGLFHLMMESG 221

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
            + D  T  ++LS+C+ +  L+ G  +H        + +VV+G++L++MY++CG +  A 
Sbjct: 222 FQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAR 281

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
             FD M  RNV +W +MISGY  HG+G +A+ LF++M+  GP P+++TFV VLSAC+H+G
Sbjct: 282 EVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSG 341

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK-MPITPNSLIWRT 735
           L+D+G + F SM + YGL+P +E   CMVD+ GRAG L+   +FI K +P  P   +W +
Sbjct: 342 LIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTS 401

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           +LGA CR + R  +LG K A  +  +EP+N  +YV+L+N+YA  G+ + V   R  M   
Sbjct: 402 MLGA-CRMH-RNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRR 459

Query: 796 EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
            +KK+ G S + +    ++F  GD+SHP+ + IY  L EL  +  ++GYVP  +  + DL
Sbjct: 460 RLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDL 519

Query: 856 EPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
           E E ++  + YHSEK+A+AF +L  N    IRI+KNLR+C DCHSA K IS I  REI++
Sbjct: 520 EEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIV 579

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RD  RFHHF DG CSC DYW
Sbjct: 580 RDKFRFHHFKDGSCSCLDYW 599



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 208/445 (46%), Gaps = 34/445 (7%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R  ++VH ++I SGL    ++   L+++    G+I  +R +F  +   DS  +++++   
Sbjct: 41  RNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVT 100

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            + G   + ++ +  M   G   SN++  S + +CA L  + LG++IH   +  G  SD+
Sbjct: 101 SKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDM 160

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V  AL++LYA A  +    KVF  MP+   ++WNS+I  + D   L  E++  +  M  
Sbjct: 161 YVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGY-DQNGLPQESIGLFHLMME 219

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           +G+ P+  T +++L++ S       G  +H             +  +L++ Y +CG +  
Sbjct: 220 SGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSK 279

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
             ++F  M E R+ V+W +MISGY  +    +AM L   M   G R ++ TF  VLSACA
Sbjct: 280 AREVFDSMKE-RNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACA 338

Query: 573 SVATLERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF-DLMPVRN 626
               ++ G  V      A G+   +E +V     +VDM+ + G ++ A +F    +P   
Sbjct: 339 HSGLIDDGRRVFSSMKEAYGLVPGVEHNV----CMVDMFGRAGLLNDAYQFIKKFIPKEP 394

Query: 627 VYS-WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
             + W SM+     H + D                     +GV  A     +  E   H+
Sbjct: 395 GPAVWTSMLGACRMHRNFD---------------------LGVKVAEHVLSVEPENPGHY 433

Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGR 710
             +S +Y L  ++++   + +++ R
Sbjct: 434 VMLSNIYALAGRMDRVEMVRNMMTR 458



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 148/301 (49%), Gaps = 8/301 (2%)

Query: 240 GFARLGNFYYARKIFEQMIQKN-----VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVG 294
           GF+     +Y R +F    Q N     V+     +   R GKE+H +++  G    + V 
Sbjct: 104 GFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQ 163

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
             L+ +YAK   +  ++ VF  M  +  ++WN++ISG DQNG  +E+I  F  M   G  
Sbjct: 164 AALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQ 223

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
             + +++S LSSC+ LG +  G  +H      G D +V +  +L+++Y   G +S+  +V
Sbjct: 224 PDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREV 283

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  M E + V+W ++I  +        +A++ + +MR  G  PN +TF+ +L+A +   +
Sbjct: 284 FDSMKERNVVTWTAMISGYG-MHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGL 342

Query: 475 GKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFAR-MSERRDEVSWNSM 532
              G +V + + + Y +         ++  +G+ G ++D  +   + + +      W SM
Sbjct: 343 IDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSM 402

Query: 533 I 533
           +
Sbjct: 403 L 403



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 131/259 (50%), Gaps = 12/259 (4%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  ++  G+  D+++   LI +Y +  D+  A K+FD MP R  ++W  ++SGY  
Sbjct: 144 GKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQ 203

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+  E+  +F  M+ +GF  +   + S+L +C + G     FG  +H     +    + 
Sbjct: 204 NGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLG--ALDFGCWLHDYADGNGFDLNV 261

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           ++   LI MY  C  +   AR +F+ ++ R++++W ++IS Y   G      +LF+ M+ 
Sbjct: 262 VLGTSLINMYTRC-GNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRA 320

Query: 184 EGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKA-GLLSDLYVGSALVSGF 241
            G R    PN  TF ++++A A+S ++      +++ + +K+A GL+  +     +V  F
Sbjct: 321 YGPR----PNNITFVAVLSACAHSGLIDDG---RRVFSSMKEAYGLVPGVEHNVCMVDMF 373

Query: 242 ARLGNFYYARKIFEQMIQK 260
            R G    A +  ++ I K
Sbjct: 374 GRAGLLNDAYQFIKKFIPK 392



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 157/346 (45%), Gaps = 28/346 (8%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H  I+  G      L   LI++    G +  A +LF  +P+ +S  +  ++   
Sbjct: 41  RNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVT 100

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G S +    ++ M+ +G   + Y   SV++AC +   S  + G ++H  V+      
Sbjct: 101 SKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADL--SALRLGKEIHSHVMVCGYGS 158

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V   LIA+Y         A+++F+ +  R +I+WNS+IS Y Q G       LF  M
Sbjct: 159 DMYVQAALIALYAKA-SDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLM 217

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
              GF    +P+  T  SL+++   S L        +       G   ++ +G++L++ +
Sbjct: 218 MESGF----QPDSATIVSLLSSC--SQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMY 271

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------RKG----KEVHGYLIRSGLFDMV 291
            R GN   AR++F+ M ++NVV+   ++ G       R+      E+  Y  R      V
Sbjct: 272 TRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFV 331

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           AV    ++  A  G IDD R VF  M  K++     ++ G++ N C
Sbjct: 332 AV----LSACAHSGLIDDGRRVFSSM--KEAYG---LVPGVEHNVC 368


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 243/665 (36%), Positives = 363/665 (54%), Gaps = 43/665 (6%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R  + VH  +I   L    ++G  L+  YA    +  +R VF  +  ++ +  N MI   
Sbjct: 56  RTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSY 115

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
             NG Y E +  F  M    +   +++    L +C+  G I++G++IHG   K+GL S +
Sbjct: 116 VNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V N L+S+Y   G+LS    V   M   D VSWNS++  +A ++    +A++   +M  
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRF-DDALEVCREMES 234

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
              S +  T  ++L A S+                      TT EN +            
Sbjct: 235 VKISHDAGTMASLLPAVSN----------------------TTTENVMY----------- 261

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
            + +F +M  ++  VSWN MI  Y+ N +  +A+ L   M   G   D  +  +VL AC 
Sbjct: 262 VKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACG 320

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
             + L  G ++H    R  L  ++++ +AL+DMY+KCG ++ A   F+ M  R+V SW +
Sbjct: 321 DTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTA 380

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           MIS Y   G G  A+ LFS+++  G +PD + FV  L+ACSHAGL++EG   FK M+  Y
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHY 440

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
            + P+LE  +CMVDLLGRAG++ +   FI  M + PN  +W  +LGA CR +   T++G 
Sbjct: 441 KITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA-CRVHS-DTDIGL 498

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
            AA+ LF++ P+ +  YVLL+N+YA  G+WE+V   R  MK   +KK  G S V +   +
Sbjct: 499 LAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRII 558

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
           H F+ GD SHP+ D IY +L  L +KM++ GYVP ++ AL D+E E KE  ++ HSEK+A
Sbjct: 559 HTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLA 618

Query: 873 VAFVL------TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           + F L        +S   IRI KNLR+CGDCH A K IS+I  REI++RD+NRFH F  G
Sbjct: 619 IVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFG 678

Query: 927 KCSCG 931
            CSC 
Sbjct: 679 VCSCA 683



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 182/382 (47%), Gaps = 19/382 (4%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H +I+      +  L   L+  Y  + D+ASA K+FDE+P+RN +    ++  Y + 
Sbjct: 59  RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   E  K+F  M       + Y    VL+AC   G      G ++H    K   +    
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGT--IVIGRKIHGSATKVGLSSTLF 176

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V N L++MYG C   ++ AR + +E+  RD++SWNS++  Y+Q        ++   M+  
Sbjct: 177 VGNGLVSMYGKCGFLSE-ARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMES- 234

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLS-DLYVGSALVSGFAR 243
                +  +  T  SL+ A  ++       ++ +   + K  L+S ++ +G  + +    
Sbjct: 235 ---VKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPV 291

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGL 297
                Y+R +     + + VS+  ++           GK++HGY+ R  L   + + N L
Sbjct: 292 EAVELYSR-MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENAL 350

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS--GLDQNGCYEEAIMNFCAMRRDGLMS 355
           ++MYAKCG ++ +R VF  M  +D VSW  MIS  G    GC  +A+  F  ++  GL+ 
Sbjct: 351 IDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGC--DAVALFSKLQDSGLVP 408

Query: 356 SNFSLISTLSSCASLGWIMLGQ 377
            + + ++TL++C+  G +  G+
Sbjct: 409 DSIAFVTTLAACSHAGLLEEGR 430


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 250/718 (34%), Positives = 378/718 (52%), Gaps = 83/718 (11%)

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFMIG--KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
              LV  YA    +  + S F  +    +D+V  N +IS   +      A+  F ++   
Sbjct: 91  ATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLAS 150

Query: 352 G-LMSSNFSLISTLSSCASLGWIMLGQ--QIHGEGLKLGLDSDVSVSNALLSLY-----A 403
           G L   ++S  + LS+   L  I +    Q+H   LK G    +SV NAL++LY      
Sbjct: 151 GSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESP 210

Query: 404 DAGYLSRCLKVFFLMPEHDQVSW-------------------------------NSVIGA 432
           +A   +R  KV   MP  D ++W                               N++I  
Sbjct: 211 EATRDAR--KVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISG 268

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY--NV 490
           +  S  +  EA + +  M       +  TF ++L+A ++  +   G  VH Q+I+   N 
Sbjct: 269 YVHS-GMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNF 327

Query: 491 ANET--TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN- 547
             E    + NAL++ Y KCG +    +IF  M+  +D VSWN+++SGY+ +  L KA+  
Sbjct: 328 VPEAALPVNNALVTFYSKCGNIAVARRIFDNMT-LKDVVSWNTILSGYVESSCLDKAVEV 386

Query: 548 ---------LVWFMMQRGQ---------------------RLDHFTFATVLSACASVATL 577
                    L W +M  G                      +   +T+A  ++AC  +  L
Sbjct: 387 FEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGAL 446

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
           + G ++H   V+   E     G+AL+ MY++CG +  A   F +MP  +  SWN+MIS  
Sbjct: 447 KHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISAL 506

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
            +HGHG +AL LF +M  +G  PD ++F+ VL+AC+H+GLVDEGF++F+SM + +G+IP 
Sbjct: 507 GQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPG 566

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
            + ++ ++DLLGRAG + +  + I  MP  P   IW  +L  C  +     ELG  AA+ 
Sbjct: 567 EDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSG--DMELGAHAADQ 624

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           LF+M PQ+   Y+LL+N Y++ G W D A+ RK M++  VKKE GCSW+   + VHVF+ 
Sbjct: 625 LFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLV 684

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-V 876
           GD  HPE   +Y+ L+ +  KMR  GYVP TK  L D+EP  KE ++  HSE++AV F +
Sbjct: 685 GDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGL 744

Query: 877 LTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           L       + ++KNLR+C DCH+A  F+SK VGREIV+RD  RFHHF DG+CSCG+YW
Sbjct: 745 LNLPPGATVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/551 (24%), Positives = 245/551 (44%), Gaps = 73/551 (13%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVSGYTHKGMSNEACKMFKEMVRAG 81
            +L+  Y     L +A   FD +P   R++V    ++S Y     +  A  +F+ ++ +G
Sbjct: 92  TSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151

Query: 82  FL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC--LE 138
            L  + Y+  ++L A         +   Q+HC VLKS       V N L+A+Y  C   E
Sbjct: 152 SLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPE 211

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDT--------------------------- 171
           +T  AR++ +E+  +D ++W +++  Y +RGD                            
Sbjct: 212 ATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVH 271

Query: 172 ----ISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKA 225
               +  F+LF RM  E  R  L  +E+TF S+++A  +  L   G  +  QI+ +    
Sbjct: 272 SGMAVEAFELFRRMVLE--RVPL--DEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNF 327

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS 285
              + L V +ALV+ +++ GN   AR+IF+ M  K+VVS N ++ G              
Sbjct: 328 VPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSG-------------- 373

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
                          Y +   +D +  VF  M  K+ +SW  M+SG    G  E+A+  F
Sbjct: 374 ---------------YVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLF 418

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             MR + +   +++    +++C  LG +  G+Q+HG  ++LG +   S  NAL+++YA  
Sbjct: 419 NKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARC 478

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
           G +     +F +MP  D VSWN++I A         EA++ +  M   G  P+ ++F+ +
Sbjct: 479 GAVKEAHLMFLVMPNIDSVSWNAMISALG-QHGHGREALELFDRMVAEGIYPDRISFLTV 537

Query: 466 LAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           L A +   +   G +    + + + +         L+   G+ G + +   +   M    
Sbjct: 538 LTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEP 597

Query: 525 DEVSWNSMISG 535
               W +++SG
Sbjct: 598 TPSIWEAILSG 608



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 14/305 (4%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV   NT+++ YV    L  A ++F+EMP +N +SW  +VSGY H G + +A K+F +M 
Sbjct: 363 DVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMR 422

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
                   Y     + AC E G    K G Q+H  +++          N LI MY  C  
Sbjct: 423 SENVKPCDYTYAGAIAACGELG--ALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGA 480

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             + A  +F  +   D +SWN++IS   Q G      +LF RM  EG    + P+  +F 
Sbjct: 481 VKE-AHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEG----IYPDRISFL 535

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           +++TA   S L      +   +M +  G++      + L+    R G    AR + + M 
Sbjct: 536 TVLTACNHSGLVDEG-FRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMP 594

Query: 259 QKNVVSM-NGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRS 312
            +   S+   ++ G R  G    G      LF M    +G    L N Y+  G   D+  
Sbjct: 595 FEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAAR 654

Query: 313 VFRFM 317
           V + M
Sbjct: 655 VRKLM 659



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 15/204 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  I++ GF       N LI +Y R G +  A  +F  MP+ +SVSW  ++S  
Sbjct: 447 KHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISAL 506

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKF--GMQVHCLVLKS 117
              G   EA ++F  MV  G   +R +  +VL AC   G    GF++   M+    ++  
Sbjct: 507 GQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPG 566

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRI-FEEIETRDLISWNSIISVYSQRGD----TI 172
              +  L+   L+   G   E+ D  + + FE   +     W +I+S     GD      
Sbjct: 567 EDHYTRLID--LLGRAGRIGEARDLIKTMPFEPTPS----IWEAILSGCRTSGDMELGAH 620

Query: 173 SVFKLFSRMQREGFRYSLKPNEYT 196
           +  +LF    +    Y L  N Y+
Sbjct: 621 AADQLFKMTPQHDGTYILLSNTYS 644


>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 198/372 (53%), Positives = 265/372 (71%), Gaps = 3/372 (0%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
            A +L ACASVA LE+G +VHA  ++   E DV + + LVDMY KCGRI+ A   F  + 
Sbjct: 1   MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
             +V SWN+MISG A+HG G +A+ LF QM   G  P+ +TFV VLS CSHAGLVDEG  
Sbjct: 61  EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
           +F SM++ +G+ P+ E +SCMVDL GRAG LD+   FIN+MP+ PN+ +W ++LGA CR 
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGA-CRV 179

Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
           +    EL  +A   L E+ P+N   YVLL+N+YA+ G+W+D  K RK MK+  VKKE GC
Sbjct: 180 H-GNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGC 238

Query: 804 SWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDL 863
           SW+ +++ VH F+ GD SHP+ + IYE L+ L  +M+ AGY+P T F L D+E E KE +
Sbjct: 239 SWIEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWI 298

Query: 864 VSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHH 922
           + +HSEK+A+AF +++      IR++KNLRVCGDCH+A KFIS+IV REIVLRD++RFHH
Sbjct: 299 LGHHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHH 358

Query: 923 FNDGKCSCGDYW 934
           F DG+CSCGDYW
Sbjct: 359 FKDGQCSCGDYW 370



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 2/162 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
            +GK+VH  +I+ G    V+V NGLV+MY KCG I+D++ VF  ++  D  SWN MISGL
Sbjct: 15  EQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGL 74

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSD 391
            Q+GC +EA++ F  M + G+  +  + +  LS C+  G +  G+       +  G+   
Sbjct: 75  AQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPK 134

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
               + ++ L+  AG L   L     MP E +   W S++GA
Sbjct: 135 AEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGA 176



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 6/199 (3%)

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           IL A +S +  + G QVHA +IK     + ++ N L+  YGKCG ++D +++F+++ E  
Sbjct: 4   ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLE-P 62

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
           D  SWN+MISG   +    +A+ L   M+Q G + +  TF  VLS C+    ++ G    
Sbjct: 63  DVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYF 122

Query: 585 ACGVR-ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGH 642
               R   +       S +VD++ + G +D A  F + MPV  N   W S++     HG+
Sbjct: 123 DSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGN 182

Query: 643 ---GDKALTLFSQMKLDGP 658
               ++A+    ++  + P
Sbjct: 183 IELAERAVEQLIELTPENP 201



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 85/171 (49%), Gaps = 2/171 (1%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L +CAS+  +  G+Q+H + +K+G + DVSVSN L+ +Y   G +    +VF  + E D 
Sbjct: 5   LRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDV 64

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
            SWN++I   A       EAV  +  M + G  PN +TF+ +L+  S   +   G     
Sbjct: 65  ASWNAMISGLA-QHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFD 123

Query: 484 QVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            + + + ++ +    + ++  +G+ G +D+      +M    +   W S++
Sbjct: 124 SMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLL 174



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 104/240 (43%), Gaps = 24/240 (10%)

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE 148
           +  +LRAC     +  + G QVH  ++K     D  VSN L+ MYG C    D A+ +F 
Sbjct: 1   MAGILRACASV--AALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIED-AQEVFS 57

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
           ++   D+ SWN++IS  +Q G       LF +M + G    +KPN+ TF  +++    + 
Sbjct: 58  KLLEPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTG----VKPNQITFVVVLSGCSHAG 113

Query: 209 L--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN 266
           L   G        +M +  G+       S +V  F R G    A     QM  +   S+ 
Sbjct: 114 LVDEGRNYFD---SMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVW 170

Query: 267 GLMEGRRKGKEVHGYL-----IRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFRFM 317
           G + G  +   VHG +         L ++     G    L N+YA  G  DD+  V + M
Sbjct: 171 GSLLGACR---VHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMM 227



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  I+K GF  DV + N L+++Y + G +  A ++F ++ + +  SW  ++SG 
Sbjct: 15  EQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGL 74

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G   EA  +F++M++ G   N+     VL  C   G
Sbjct: 75  AQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAG 113


>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
 gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 905

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 251/759 (33%), Positives = 402/759 (52%), Gaps = 54/759 (7%)

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           +F+ +   D++SWN+++S Y QRG       LF  M R G    + P+  TF  L+ +  
Sbjct: 147 LFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRG----VSPDRTTFAVLLKSC- 201

Query: 206 SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
            S L    L  Q+ A+  K GL  D+  GSALV  + +  +   A   F  M ++N VS 
Sbjct: 202 -SALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSW 260

Query: 266 NGLMEG-----------------------------------------RRKGKEVHGYLIR 284
              + G                                            G+++H + I+
Sbjct: 261 GAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIK 320

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
           +       VG  +V++YAK  ++ D+R  F  +      + N M+ GL + G   EA+  
Sbjct: 321 NKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGL 380

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F  M R  +     SL    S+CA       GQQ+H   +K G D D+ V+NA+L LY  
Sbjct: 381 FQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGK 440

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
              L     +F  M + D VSWN++I A  +      + + ++ +M R G  P+  T+ +
Sbjct: 441 CKALMEAYLIFQGMKQKDSVSWNAIIAAL-EQNGHYDDTILHFNEMLRFGMKPDDFTYGS 499

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           +L A ++    + G  VH +VIK  + ++  + + ++  Y KCG +D+ +K+  R+  ++
Sbjct: 500 VLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQ 559

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
             VSWN+++SG+  N+   +A      M+  G + DHFTFATVL  CA++AT+E G ++H
Sbjct: 560 -VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIH 618

Query: 585 ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGD 644
              ++  +  D  I S LVDMY+KCG +  +   F+ +  R+  SWN+MI GYA HG G 
Sbjct: 619 GQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGV 678

Query: 645 KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCM 704
           +AL +F +M+ +  +P+H TFV VL ACSH GL D+G ++F  M+  Y L PQLE F+CM
Sbjct: 679 EALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACM 738

Query: 705 VDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEP 763
           VD+LGR+    +  +FIN MP   +++IW+T+L  C  R +    EL   A+N+L  ++P
Sbjct: 739 VDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELA--ASNVLL-LDP 795

Query: 764 QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHP 823
            ++  Y+LL+N+YA  GKW DV++ R+ +K+  +KKE GCSW+ ++  +H F+ GD++HP
Sbjct: 796 DDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHP 855

Query: 824 EKDLIYEKLKELNQKMRDAGYVPQT-KFALFDLEPESKE 861
               +YE L +L  +M+ +GY P +  F   D E  + E
Sbjct: 856 RSGELYEMLNDLIGEMKLSGYEPDSASFVEVDEEGSAPE 894



 Score =  293 bits (749), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 197/660 (29%), Positives = 327/660 (49%), Gaps = 54/660 (8%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D    NT++  Y   GD+++A  LFD MPD + VSW  +VSGY  +GM  E+  +F EM 
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 183

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           R G   +R     +L++C          G+QVH L +K+    D    + L+ MYG C  
Sbjct: 184 RRGVSPDRTTFAVLLKSCSAL--EELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKC-R 240

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
           S D A   F  +  R+ +SW + I+   Q    +   +LF  MQR G   S       F 
Sbjct: 241 SLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFR 300

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK------ 252
           S   AA S + +G    +Q+ A   K    SD  VG+A+V  +A+  +   AR+      
Sbjct: 301 S--CAAMSCLNTG----RQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 354

Query: 253 -------------------------IFEQMIQK----NVVSMNGLM------EGRRKGKE 277
                                    +F+ MI+     +VVS++G+       +G  +G++
Sbjct: 355 NHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQ 414

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VH   I+SG    + V N ++++Y KC  + ++  +F+ M  KDSVSWN +I+ L+QNG 
Sbjct: 415 VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGH 474

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
           Y++ I++F  M R G+   +F+  S L +CA+L  +  G  +H + +K GL SD  V++ 
Sbjct: 475 YDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAST 534

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           ++ +Y   G +    K+   +     VSWN+++  F+ ++    EA K++ +M   G  P
Sbjct: 535 VVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKE-SEEAQKFFSEMLDMGLKP 593

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           +  TF  +L   ++ +  +LG Q+H Q+IK  + ++  I + L+  Y KCG+M D   +F
Sbjct: 594 DHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVF 653

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
            ++ E+RD VSWN+MI GY  + L  +A+ +   M +     +H TF  VL AC+ V   
Sbjct: 654 EKV-EKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 712

Query: 578 ERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMIS 635
           + G    H       LE  +   + +VD+  +      A +F + MP + +   W +++S
Sbjct: 713 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 772



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 150/571 (26%), Positives = 254/571 (44%), Gaps = 75/571 (13%)

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM------------- 328
           ++ SG      V N L+ MYA+C     +R VF  M  +D+VSWNTM             
Sbjct: 85  MVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTA 144

Query: 329 ------------------ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
                             +SG  Q G ++E++  F  M R G+     +    L SC++L
Sbjct: 145 VALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSAL 204

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
             + LG Q+H   +K GL+ DV   +AL+ +Y     L   L  F+ MPE + VSW + I
Sbjct: 205 EELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAI 264

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
                +E  V   ++ +++M+R G   +  ++ +   + ++ S    G Q+HA  IK   
Sbjct: 265 AGCVQNEQYV-RGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKF 323

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
           +++  +  A++  Y K   + D  + F  +     E S N+M+ G +   L  +AM L  
Sbjct: 324 SSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS-NAMMVGLVRAGLGIEAMGLFQ 382

Query: 551 FMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCG 610
           FM++   R D  + + V SACA      +G +VH   +++  + D+ + +A++D+Y KC 
Sbjct: 383 FMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCK 442

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
            +  A   F  M  ++  SWN++I+   ++GH D  +  F++M   G  PD  T+  VL 
Sbjct: 443 ALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLK 502

Query: 671 ACSHAGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF--------- 720
           AC+    ++ G   H K +    GL       S +VD+  + G +D+ ++          
Sbjct: 503 ACAALRSLEYGLMVHDKVIKS--GLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQV 560

Query: 721 -----------INK--------------MPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
                      +NK              M + P+   + TVL  C  AN    ELG++  
Sbjct: 561 VSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTC--ANLATIELGKQIH 618

Query: 756 NMLFEMEPQNAVNYV--LLANMYASGGKWED 784
             + + E  +   Y+   L +MYA  G   D
Sbjct: 619 GQIIKQEMLDD-EYISSTLVDMYAKCGDMPD 648



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 147/569 (25%), Positives = 249/569 (43%), Gaps = 52/569 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   +K G   DV   + L+++Y +   L  A   F  MP+RN VSW   ++G       
Sbjct: 214 HALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQY 273

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
               ++F EM R G  +++ +  S  R+C     S    G Q+H   +K+  + D +V  
Sbjct: 274 VRGLELFIEMQRLGLGVSQPSYASAFRSC--AAMSCLNTGRQLHAHAIKNKFSSDRVVGT 331

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            ++ +Y      TD ARR F  +    + + N+++    + G  I    LF  M R   R
Sbjct: 332 AIVDVYAKANSLTD-ARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIR 390

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           + +     +   + +A   +   G +  QQ+  +  K+G   D+ V +A++  + +    
Sbjct: 391 FDV----VSLSGVFSACAET--KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKAL 444

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------------- 274
             A  IF+ M QK+ VS N ++    +                                 
Sbjct: 445 MEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKAC 504

Query: 275 --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                   G  VH  +I+SGL     V + +V+MY KCG ID+++ +   + G+  VSWN
Sbjct: 505 AALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWN 564

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            ++SG   N   EEA   F  M   GL   +F+  + L +CA+L  I LG+QIHG+ +K 
Sbjct: 565 AILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQ 624

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
            +  D  +S+ L+ +YA  G +   L VF  + + D VSWN++I  +A    L  EA++ 
Sbjct: 625 EMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYA-LHGLGVEALRM 683

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYG 505
           +  M++    PN  TF+ +L A S   +   G    H     Y +  +      ++   G
Sbjct: 684 FERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILG 743

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           +     +  K    M  + D V W +++S
Sbjct: 744 RSKGPQEAVKFINSMPFQADAVIWKTLLS 772



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 108/198 (54%), Gaps = 7/198 (3%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           + H +++K G   D F+ +T++++Y + G +  A KL D +  +  VSW  I+SG++   
Sbjct: 515 MVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNK 574

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
            S EA K F EM+  G   + +   +VL  C     +  + G Q+H  ++K     D  +
Sbjct: 575 ESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL--ATIELGKQIHGQIIKQEMLDDEYI 632

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           S+ L+ MY  C +  D +  +FE++E RD +SWN++I  Y+  G  +   ++F RMQ+E 
Sbjct: 633 SSTLVDMYAKCGDMPD-SLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKE- 690

Query: 186 FRYSLKPNEYTFGSLITA 203
              ++ PN  TF +++ A
Sbjct: 691 ---NVVPNHATFVAVLRA 705



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H QI+K     D ++ +TL+++Y + GD+  +  +F+++  R+ VSW  ++ GY   
Sbjct: 615 KQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALH 674

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G+  EA +MF+ M +   + N     +VLRAC   G
Sbjct: 675 GLGVEALRMFERMQKENVVPNHATFVAVLRACSHVG 710


>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
 gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 260/784 (33%), Positives = 417/784 (53%), Gaps = 58/784 (7%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVY 165
           +VHC V+     +D  +SN+L+  Y   GS  +    A  +F+++  R+L+SW+S++S+Y
Sbjct: 61  KVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFD----AGTLFDKMPNRNLVSWSSVVSMY 116

Query: 166 SQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKA 225
           +Q G        F   QR       K NEY   S+I A       G     Q+ + V K+
Sbjct: 117 TQLGYNEKALLYFLEFQRTCVD---KLNEYILASIIRACVQR--DGGEPGSQVHSYVIKS 171

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------- 274
           G   D+YVG++LV  +A+ G    AR +F+ ++ K  V+   ++ G  K           
Sbjct: 172 GFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLF 231

Query: 275 ------------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
                                         GK++H Y++RS     V+  N L++ Y KC
Sbjct: 232 NLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKC 291

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G +   +++F  +  K+ +SW TMI+G  QN    EA+     M R G     ++  S L
Sbjct: 292 GRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVL 351

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
           +SC S+  +  G+QIH   +K+ L+ D  V+NAL+ +Y+    L    +VF ++  H  V
Sbjct: 352 TSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVV 411

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
            +N++I  ++  +  +  A++ + +MR    SP+ +TF+++L  +++    +L  Q+H  
Sbjct: 412 YYNAMIEGYS-RQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGL 470

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
           +IKY  + +    +AL+  Y KC  + D   +F   +  +D V WNS+ SGY       +
Sbjct: 471 IIKYGFSLDKFTSSALIDVYSKCSCIRDARYVF-EGTTNKDIVVWNSLFSGYNLQLKSEE 529

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
           A  L   +    +R + FTFA + +A + +A+L  G + H   ++  LE D  I +ALVD
Sbjct: 530 AFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVD 589

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
           MY+KCG ++ A + F     ++   WNSMIS YA+HG  ++AL +F  M  +   P++VT
Sbjct: 590 MYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVT 649

Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           FV VLSACSH G V++G +H+ SM++ YG+ P +E ++ +V LLGRAG L +  EFI KM
Sbjct: 650 FVSVLSACSHVGFVEDGLQHYNSMAR-YGIEPGIEHYASVVTLLGRAGRLTEAREFIEKM 708

Query: 725 PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
            I P +L+WR++L AC        EL + AA M   ++P ++ +YV+L+N++AS G W D
Sbjct: 709 TIRPAALVWRSLLSACRVFG--NVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGD 766

Query: 785 VAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGY 844
           V + R  M    V KE G SW+ +   VH+FV+ D+ H E DLIY  L EL  +M+D G 
Sbjct: 767 VKRLRLKMDVNGVVKEPGQSWIEVNGEVHIFVSRDKVHDETDLIYLALDELTTQMKDVGC 826

Query: 845 VPQT 848
           V  T
Sbjct: 827 VHDT 830



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 197/672 (29%), Positives = 326/672 (48%), Gaps = 54/672 (8%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q++  G  YDVFL N L++ Y ++G +  A  LFD+MP+RN VSW+ +VS YT  G +
Sbjct: 63  HCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYN 122

Query: 68  NEACKMFKEMVRAGF-LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            +A   F E  R     LN Y L S++RAC +    G + G QVH  V+KS    D  V 
Sbjct: 123 EKALLYFLEFQRTCVDKLNEYILASIIRACVQ--RDGGEPGSQVHSYVIKSGFGEDVYVG 180

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
             L+ +Y    E  D AR +F+ +  +  ++W +II+ Y++ G +    +LF+ M     
Sbjct: 181 TSLVVLYAKHGE-IDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMES-- 237

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
             ++ P++Y   S++ A   SVL      +QI A V ++    D+   + L+  + + G 
Sbjct: 238 --NVIPDKYVLSSILNAC--SVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGR 293

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGR---------------------------------- 272
               + +F+++  KN++S   ++ G                                   
Sbjct: 294 VKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTS 353

Query: 273 -------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                  + G+++H Y+I+  L     V N L++MY+KC  +DD++ VF  +     V +
Sbjct: 354 CGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYY 413

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N MI G  + G    A+  F  MR   +  S  + +S L   A+L  + L +QIHG  +K
Sbjct: 414 NAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIK 473

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G   D   S+AL+ +Y+    +     VF      D V WNS+   + + +    EA K
Sbjct: 474 YGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGY-NLQLKSEEAFK 532

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            Y D++ +   PN  TF  +  AAS  +    G Q H QV+K  + ++  I NAL+  Y 
Sbjct: 533 LYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYA 592

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           KCG +++ EKIF+  S  +D   WNSMIS Y  +  + +A+ +   M+      ++ TF 
Sbjct: 593 KCGSVEEAEKIFSS-SVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFV 651

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           +VLSAC+ V  +E G++ +    R  +E  +   +++V +  + GR+  A  F + M +R
Sbjct: 652 SVLSACSHVGFVEDGLQHYNSMARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIR 711

Query: 626 N-VYSWNSMISG 636
                W S++S 
Sbjct: 712 PAALVWRSLLSA 723



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 229/443 (51%), Gaps = 16/443 (3%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           ++VH  ++  GL   V + N L++ Y K G++ D+ ++F  M  ++ VSW++++S   Q 
Sbjct: 60  RKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQL 119

Query: 336 GCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           G  E+A++ F   +R  +   N + L S + +C        G Q+H   +K G   DV V
Sbjct: 120 GYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYV 179

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             +L+ LYA  G + +   VF  +     V+W ++I  +  S      +++ +  M  + 
Sbjct: 180 GTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKS-GRSEVSLQLFNLMMESN 238

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             P+     +IL A S     K G Q+HA V++     + +  N L+  Y KCG +   +
Sbjct: 239 VIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGK 298

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
            +F R+ + ++ +SW +MI+GY+ N    +A+ LV  M + G + D +  ++VL++C SV
Sbjct: 299 ALFDRL-DVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSV 357

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
             L+ G ++H+  ++ CLE D  + +AL+DMYSKC  +D A R FD++   +V  +N+MI
Sbjct: 358 DALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMI 417

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV-----------LSACSHAGLVDEGFK 683
            GY+R G+   AL +F +M+L    P  +TFV +           LS   H  ++  GF 
Sbjct: 418 EGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFS 477

Query: 684 HFKSMSQVYGLIPQLEQFSCMVD 706
             K  S    LI    + SC+ D
Sbjct: 478 LDKFTSS--ALIDVYSKCSCIRD 498



 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 208/450 (46%), Gaps = 50/450 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  +L+     DV   N LI+ Y + G + +   LFD +  +N +SW  +++GY
Sbjct: 260 KGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGY 319

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                  EA ++  EM R G+  + YA  SVL +C        + G Q+H  V+K     
Sbjct: 320 MQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSV--DALQHGRQIHSYVIKVCLEH 377

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V+N LI MY  C  + D A+R+F+ +    ++ +N++I  YS++G      ++F  M
Sbjct: 378 DNFVTNALIDMYSKC-NALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEM 436

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           + +     + P+  TF  +     S+ L    L +QI  ++ K G   D +  SAL+  +
Sbjct: 437 RLK----HVSPSFLTF--VSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVY 490

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR---------------------------- 273
           ++      AR +FE    K++V  N L  G                              
Sbjct: 491 SKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFA 550

Query: 274 -------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                         G++ H  +++ GL     + N LV+MYAKCG+++++  +F   + K
Sbjct: 551 ALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWK 610

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D+  WN+MIS   Q+G  EEA+  F  M  + +  +  + +S LS+C+ +G++  G Q +
Sbjct: 611 DTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDGLQHY 670

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
               + G++  +    ++++L   AG L+ 
Sbjct: 671 NSMARYGIEPGIEHYASVVTLLGRAGRLTE 700



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 176/347 (50%), Gaps = 10/347 (2%)

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
           I+  +++H + +  GL  DV +SN LL  Y   G +     +F  MP  + VSW+SV+  
Sbjct: 56  ILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSM 115

Query: 433 FADSEALVSEAVKYYLDMRRAGWSP-NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA 491
           +        +A+ Y+L+ +R      N     +I+ A      G+ G QVH+ VIK    
Sbjct: 116 YTQL-GYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFG 174

Query: 492 NETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWF 551
            +  +  +L+  Y K GE+D    +F  +   +  V+W ++I+GY  +     ++ L   
Sbjct: 175 EDVYVGTSLVVLYAKHGEIDKARLVFDGLV-LKTPVTWTAIITGYTKSGRSEVSLQLFNL 233

Query: 552 MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR 611
           MM+     D +  +++L+AC+ +  L+ G ++HA  +R+  + DV   + L+D Y+KCGR
Sbjct: 234 MMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGR 293

Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
           +      FD + V+N+ SW +MI+GY ++ +  +A+ L  +M   G  PD      VL++
Sbjct: 294 VKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTS 353

Query: 672 CSHAGLVDEGFKHFKSM-SQVYGLIPQLEQF--SCMVDLLGRAGELD 715
           C   G VD   +H + + S V  +  + + F  + ++D+  +   LD
Sbjct: 354 C---GSVD-ALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALD 396



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 140/288 (48%), Gaps = 18/288 (6%)

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
           G    N+L A  S        +VH QV+ + +  +  + N LL  Y K G + D   +F 
Sbjct: 40  GRALANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFD 99

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG--QRLDHFTFATVLSACASVAT 576
           +M   R+ VSW+S++S Y       KA+ L +   QR    +L+ +  A+++ AC     
Sbjct: 100 KMP-NRNLVSWSSVVSMYTQLGYNEKAL-LYFLEFQRTCVDKLNEYILASIIRACVQRDG 157

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
            E G +VH+  +++    DV +G++LV +Y+K G ID A   FD + ++   +W ++I+G
Sbjct: 158 GEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITG 217

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           Y + G  + +L LF+ M     +PD      +L+ACS  G       + K   Q++  + 
Sbjct: 218 YTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLG-------YLKGGKQIHAYVL 270

Query: 697 QLE------QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
           + E       ++ ++D   + G +   +   +++ +  N + W T++ 
Sbjct: 271 RSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDV-KNIISWTTMIA 317



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 121/254 (47%), Gaps = 9/254 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           +K  H  I+K+GF+ D F  + LI+VY +   +  A  +F+   +++ V W  + SGY  
Sbjct: 464 SKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNL 523

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           +  S EA K++ ++  +    N +   ++  A      +    G Q H  V+K     D 
Sbjct: 524 QLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASIL--ASLPHGQQFHNQVMKMGLESDP 581

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            ++N L+ MY  C  S + A +IF     +D   WNS+IS+Y+Q G      ++F  M  
Sbjct: 582 FITNALVDMYAKC-GSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVS 640

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
                ++ PN  TF S+++A  S V      LQ   +M  + G+   +   +++V+   R
Sbjct: 641 N----NINPNYVTFVSVLSAC-SHVGFVEDGLQHYNSMA-RYGIEPGIEHYASVVTLLGR 694

Query: 244 LGNFYYARKIFEQM 257
            G    AR+  E+M
Sbjct: 695 AGRLTEAREFIEKM 708


>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 239/709 (33%), Positives = 393/709 (55%), Gaps = 77/709 (10%)

Query: 192 PNEYTFGSLITAAYSSVLS-GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
           PN   F  L+ +   S  + G+ L+   + M +      ++++ + L+  + +      A
Sbjct: 13  PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQ---FSMEIFIQNRLIDVYGKCDCLDDA 69

Query: 251 RKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDS 310
           RK+F++M Q+N  + N L                             +++  K G +D++
Sbjct: 70  RKLFDRMPQRNTFTWNSL-----------------------------ISVLTKSGFLDEA 100

Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
             +F  M   D  SWN+M+SG  Q+  +EE++  F  M R+  + + +S  S LS+CA L
Sbjct: 101 ARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGL 160

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
             + +G Q+H    K    +DV + +AL+ +Y+  G ++   +VF  M E + V+WNS+I
Sbjct: 161 MDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLI 220

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN- 489
             + +     SEA++ ++ M  +G  P+ VT  ++++A +S    K G Q+HA+V+K N 
Sbjct: 221 TCY-EQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNK 279

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSER-------------------------- 523
             ++  + NAL+  Y KC ++++  ++F RMS R                          
Sbjct: 280 FRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFS 339

Query: 524 ----RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
               R+ VSWN++I+GY  N    +A+ L   + +      H+TF  +LSACA++A L  
Sbjct: 340 KMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLL 399

Query: 580 GMEVHACGVRACLEF------DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           G + H   ++   EF      D+ +G++L+DMY KCG I+  SR F+ M  R+  SWN++
Sbjct: 400 GRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAI 459

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I GYA++G+G +AL +F +M + G  PDHVT +GVL ACSHAGLV+EG  +F SM + +G
Sbjct: 460 IVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE-HG 518

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGR 752
           LIP  + ++CMVDLLGRAG L++ +  I  MP+ P++++W ++L AC    N    E+G+
Sbjct: 519 LIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGN---IEMGK 575

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
            AA  L E++P N+  YVLL+NMYA  G+W DV + RK M++  V K+ GCSW+ ++  V
Sbjct: 576 HAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRV 635

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTK-FALFDLEPESK 860
           HVF+  D+SHP +  IY  LK L ++M+  GY+P    F  +D + +S+
Sbjct: 636 HVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPDANDFEAYDEQSKSE 684



 Score =  249 bits (636), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 167/572 (29%), Positives = 275/572 (48%), Gaps = 75/572 (13%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           ++  +L H +IL   F+ ++F+ N LI+VY +   L  A KLFD MP RN+ +W  ++S 
Sbjct: 31  ARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISV 90

Query: 61  YTHKGMSNEACKMFKEMV-------------------------------RAGFLLNRYAL 89
            T  G  +EA ++F  M                                R  FLLN Y+ 
Sbjct: 91  LTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSF 150

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
           GS L AC   G      G QVH LV KS  + D  + + LI MY  C  S  CA  +F  
Sbjct: 151 GSALSAC--AGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKC-GSVACAEEVFSG 207

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
           +  R+L++WNS+I+ Y Q G      ++F RM   G    L+P+E T  S+++A  +S+ 
Sbjct: 208 MIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSG----LEPDEVTLASVVSAC-ASLC 262

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
           +    LQ    +VK      DL +G+ALV  +A+      AR++F++M  +NVVS   ++
Sbjct: 263 ALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMV 322

Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
            G                             YA+  ++  +R +F  M  ++ VSWN +I
Sbjct: 323 SG-----------------------------YARAASVKAARFMFSKMTQRNVVSWNALI 353

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL- 388
           +G  QNG  EEA+  F  ++R+ +  ++++  + LS+CA+L  ++LG+Q H   LK G  
Sbjct: 354 AGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFE 413

Query: 389 -----DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
                +SD+ V N+L+ +Y   G +    +VF  M E D VSWN++I  +A +    +EA
Sbjct: 414 FQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQN-GYGAEA 472

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           ++ +  M   G  P+ VT I +L A S   + + G      + ++ +         ++  
Sbjct: 473 LQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDL 532

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
            G+ G +++ + +   M    D V W S+++ 
Sbjct: 533 LGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAA 564



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 221/466 (47%), Gaps = 69/466 (14%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  + K  ++ DV++ + LI++Y + G +A A ++F  M +RN V+W  +++ Y   G +
Sbjct: 170 HALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPA 229

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV-S 126
           +EA ++F  M+ +G   +   L SV+ AC        K G+Q+H  V+K+N+  D LV  
Sbjct: 230 SEALEVFVRMMDSGLEPDEVTLASVVSACASL--CALKEGLQIHARVVKTNKFRDDLVLG 287

Query: 127 NVLIAMYGSCLE------------------------------STDCARRIFEEIETRDLI 156
           N L+ MY  C +                              S   AR +F ++  R+++
Sbjct: 288 NALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVV 347

Query: 157 SWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA--YSSVLSG--- 211
           SWN++I+ Y+Q G+     +LF  ++RE    S+ P  YTFG+L++A    + +L G   
Sbjct: 348 SWNALIAGYTQNGENEEALRLFRLLKRE----SIWPTHYTFGNLLSACANLADLLLGRQA 403

Query: 212 -SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
            +++L+Q      ++G  SD++VG++L+  + + G+     ++FE+M +++ VS N ++ 
Sbjct: 404 HTHVLKQGFEF--QSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIV 461

Query: 271 GRRKGKEVHGYLIRSGLFDMVAVGN--------GLVNMYAKCGTIDDSRSVFRFMIGKDS 322
           G    +  +G         M+  G         G++   +  G +++ R  F  M     
Sbjct: 462 G--YAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGL 519

Query: 323 VS----WNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           +     +  M+  L + GC  EA  ++    +  D ++       S L++C   G I +G
Sbjct: 520 IPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWG-----SLLAACKVHGNIEMG 574

Query: 377 QQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLKVFFLMPEH 421
           +  H     L +D   S    LLS +YA+ G     ++V  LM + 
Sbjct: 575 K--HAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQ 618


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/584 (39%), Positives = 342/584 (58%), Gaps = 13/584 (2%)

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
           M  +F  ISTL  C ++  I   +Q+H +    G+  D+ V+N LL + A    L     
Sbjct: 1   MDPDF-FISTLFKCRNIFQI---KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHL 56

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           +F  M E D VSW+ +IG F  +        + + ++ RAG  P+  +   ++ A     
Sbjct: 57  LFNKMEERDPVSWSVMIGGFVKN-GDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTM 115

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
              +G  +H+ V+K  +  +  + + L+  Y KCG +D+ +++F RM  ++D V+   MI
Sbjct: 116 GLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMP-KKDLVTRTVMI 174

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH--ACGVRAC 591
           +GY       ++  L   M + G   D     T+++ACA +  + +   VH   C  R  
Sbjct: 175 AGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYS 234

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
           L  DV +G+A++DMY+KCG ID +   FD M  +NV SW++MI  Y  HG G +AL LF 
Sbjct: 235 L--DVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFH 292

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRA 711
            M   G +P+ +TF+ +L ACSHAGLVD+G + F  MS  YG+ P ++ ++CMVDLLGRA
Sbjct: 293 MMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRA 352

Query: 712 GELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVL 771
           G LD+    I  M +  +  IW   LGA CR + R+ +L  KAA +L  ++ QN  +Y+L
Sbjct: 353 GRLDQALRLIENMEVEKDEGIWCAFLGA-CRIH-RQVDLAEKAAKLLLSLQTQNPGHYIL 410

Query: 772 LANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEK 831
           L+N+YA+ G+W+DVAK R  M +  +KK  G +W+ + + ++ F AGD SH   + IYE 
Sbjct: 411 LSNIYANAGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEM 470

Query: 832 LKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKN 890
           LK L+QK+  AGYVP T   L D++ E K  ++  HSEK+A+AF ++      PIRI KN
Sbjct: 471 LKSLSQKLESAGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKN 530

Query: 891 LRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           LRVCGDCHS  K +S I  R+I++RD+NRFHHF +G CSCGDYW
Sbjct: 531 LRVCGDCHSFCKLVSAITQRDIIVRDANRFHHFKEGICSCGDYW 574



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 188/392 (47%), Gaps = 15/392 (3%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           K+VH  +  +G+   + V N L+ M AK   +  +  +F  M  +D VSW+ MI G  +N
Sbjct: 20  KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKN 79

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G YE     F  + R G    NFSL   + +C     +++G+ IH   LK GL  D  V 
Sbjct: 80  GDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVC 139

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           + L+ +YA  G +    ++F  MP+ D V+   +I  +A+     +E+   +  MRR G+
Sbjct: 140 STLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAEC-GKPNESWVLFDQMRRDGF 198

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            P+ V  + I+ A +          VH  V     + +  +  A++  Y KCG +D   +
Sbjct: 199 VPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSRE 258

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           IF RM E+++ +SW++MI  Y ++    +A+ L   M+  G   +  TF ++L AC+   
Sbjct: 259 IFDRM-EQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAG 317

Query: 576 TLERGMEVHAC-----GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV-RNVYS 629
            ++ G+++ +      GVR     DV   + +VD+  + GR+D A R  + M V ++   
Sbjct: 318 LVDDGLQLFSLMSVSYGVRP----DVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGI 373

Query: 630 WNSMISGYARHGHGD---KALTLFSQMKLDGP 658
           W + +     H   D   KA  L   ++   P
Sbjct: 374 WCAFLGACRIHRQVDLAEKAAKLLLSLQTQNP 405



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 231/489 (47%), Gaps = 57/489 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q+   G  +D+ + N L+ +  +  DL +A  LF++M +R+ VSW+ ++ G+   
Sbjct: 20  KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKN 79

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G      + F+E++RAG   + ++L  V++AC++    G   G  +H  VLK+    D  
Sbjct: 80  GDYERCFQTFRELIRAGSKPDNFSLPFVIKACRD--TMGLIMGRLIHSTVLKNGLHLDNF 137

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V + L+ MY  C    D A+++F+ +  +DL++   +I+ Y++ G     + LF +M+R+
Sbjct: 138 VCSTLVDMYAKC-GMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRD 196

Query: 185 GFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           GF     P++    +++ A A    ++ + L+   +   ++  L  D+ +G+A++  +A+
Sbjct: 197 GF----VPDKVAMVTIVNACAKLGAMNKARLVHDYVC-ARRYSL--DVELGTAMIDMYAK 249

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLM-----EGR-RKGKEVHGYLIRSGLFDMVAVGNGL 297
            G+   +R+IF++M QKNV+S + ++      G+ R+  E+   ++ SG+         L
Sbjct: 250 CGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISL 309

Query: 298 VNMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA---IMNFCAMR 349
           +   +  G +DD   +F  M     +  D   +  M+  L + G  ++A   I N    +
Sbjct: 310 LYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEK 369

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQI----HGEGLKLGLDSDVSVSNALLS-LYAD 404
            +G+             CA LG   + +Q+        L L L +       LLS +YA+
Sbjct: 370 DEGIW------------CAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYAN 417

Query: 405 AGYLSRCLKVFFLM--------PEHDQVSWNSVIGAF--ADSEALVSEAVKYYL-----D 449
           AG      K+  LM        P +  +  +++I  F   D+  L S  +   L      
Sbjct: 418 AGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQK 477

Query: 450 MRRAGWSPN 458
           +  AG+ P+
Sbjct: 478 LESAGYVPD 486



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 178/382 (46%), Gaps = 46/382 (12%)

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR 272
           + ++Q+ A V   G++ DL V + L+   A+  +   A  +F +M +++ VS + ++ G 
Sbjct: 17  FQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGF 76

Query: 273 RK-----------------------------------------GKEVHGYLIRSGLFDMV 291
            K                                         G+ +H  ++++GL    
Sbjct: 77  VKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDN 136

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
            V + LV+MYAKCG ID+++ +F  M  KD V+   MI+G  + G   E+ + F  MRRD
Sbjct: 137 FVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRD 196

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G +    ++++ +++CA LG +   + +H          DV +  A++ +YA  G +   
Sbjct: 197 GFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSS 256

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
            ++F  M + + +SW+++IGA+        EA++ +  M  +G  PN +TFI++L A S 
Sbjct: 257 REIFDRMEQKNVISWSAMIGAYG-YHGQGREALELFHMMLNSGIIPNRITFISLLYACSH 315

Query: 472 FSMGKLGHQVHAQV-IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
             +   G Q+ + + + Y V  +      ++   G+ G +D   ++   M   +DE  W 
Sbjct: 316 AGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWC 375

Query: 531 SMISG-YIHNE--LLPKAMNLV 549
           + +    IH +  L  KA  L+
Sbjct: 376 AFLGACRIHRQVDLAEKAAKLL 397



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 54/97 (55%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+L H  +    ++ DV L   +I++Y + G + S+ ++FD M  +N +SW+ ++  Y +
Sbjct: 221 ARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGY 280

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G   EA ++F  M+ +G + NR    S+L AC   G
Sbjct: 281 HGQGREALELFHMMLNSGIIPNRITFISLLYACSHAG 317


>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
          Length = 924

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 261/835 (31%), Positives = 421/835 (50%), Gaps = 93/835 (11%)

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLI---AMY 133
           M+ +GF    +    +L+    CG  G+            + + FDG+    ++   AM 
Sbjct: 75  MIISGFRPTVFVSNCLLQLYINCGNLGY------------ATKLFDGMPLRDVVSWNAMI 122

Query: 134 GSCLESTDCARR--IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
                S D  R    FE + TRD++SWNS++S + Q G+ +   K+F  M R G  +  K
Sbjct: 123 FGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNK 182

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
               +F  ++     S+L    L  QI  +  + G  +D+  GSAL+  +A+      + 
Sbjct: 183 ----SFSVILKVC--SILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESF 236

Query: 252 KIFEQMIQKNVVSMNGLMEG---------------------------------------- 271
            +F  M QKN +S + ++ G                                        
Sbjct: 237 TVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLP 296

Query: 272 -RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
             R G ++H + ++S       V    ++MYAKC  + D++ +F      +  S+N MI+
Sbjct: 297 DLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMIT 356

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           G  Q      A++ F  + +  L     SL   L +CA++  +  G Q+HG   K     
Sbjct: 357 GYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSR 416

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           ++ V+NA + +Y     L    +VF  M   D VSWN++I A   +E   S+ +   + M
Sbjct: 417 NICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEER-SKTLNILVSM 475

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
            R+G  P+  TF ++L A +  S+   G ++H  ++K  +A+   I ++L+  Y KCG +
Sbjct: 476 LRSGMEPDEYTFGSVLKACAGDSLNH-GMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMI 534

Query: 511 DDCEKIFARM-----------------------SERRDE---VSWNSMISGYIHNELLPK 544
           D+ EKI  ++                        +RR +   VSWN++ISGY+  +    
Sbjct: 535 DEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSED 594

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
           A      MM+ G   D FT++TVL  CA++A++  G ++HA  ++  L++DV I S LVD
Sbjct: 595 AQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVD 654

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
           MYSKCG +  +   F+  P+R+  +WN+MI GYA HG G++A+ LF  M L   +P+H T
Sbjct: 655 MYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHAT 714

Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           FV +L AC+H GLV+ G  +F  M + YGL P+LE +S MVD+LG++GE++K  E I +M
Sbjct: 715 FVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEM 774

Query: 725 PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
           P   + +IWRT+L A C+ N    E    AAN L  ++PQ++  Y+LL+N+YA  G W+ 
Sbjct: 775 PFEADDVIWRTLLSA-CKINRNNVEAAEVAANALLRLDPQDSSTYILLSNIYADAGMWDK 833

Query: 785 VAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
            ++ R AM+  ++KKE GCSWV ++D  H F+ GD++HP    IY  L  +  +M
Sbjct: 834 ASELRTAMRSDKLKKEPGCSWVEIRDEFHTFLVGDKAHPRWKEIYNGLALIYNEM 888



 Score =  230 bits (586), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 181/734 (24%), Positives = 324/734 (44%), Gaps = 113/734 (15%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD------------------- 44
            K  H  ++  GF   VF+ N L+ +Y+  G+L  A+KLFD                   
Sbjct: 68  GKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAMIFGYAA 127

Query: 45  ------------EMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSV 92
                        MP R+ VSW  ++SG+   G + E+ K+F EM R+G   +  +   +
Sbjct: 128 SNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVI 187

Query: 93  LRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIET 152
           L+ C       +K G Q+H + L+     D +  + L+ MY  C +  D +  +F  +  
Sbjct: 188 LKVCSIL--ENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKC-KRLDESFTVFYAMPQ 244

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGS 212
           ++ ISW++II+   Q        K+F  MQ+ G   S    +  + S++ +   + L   
Sbjct: 245 KNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVS----QSIYASVLKSC--ATLPDL 298

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM--- 269
            L  Q+ A   K+  + D  V +A +  +A+  N   A+++F+     N+ S N ++   
Sbjct: 299 RLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGY 358

Query: 270 --------------------------------------EGRRKGKEVHGYLIRSGLFDMV 291
                                                 +G  +G ++HG   +S     +
Sbjct: 359 SQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNI 418

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
            V N  ++MY KC  +D++  VF  M  KD+VSWN +I+  +QN    + +    +M R 
Sbjct: 419 CVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRS 478

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G+    ++  S L +CA    +  G +IH   +KLG+ S+  + ++L+ +Y+  G +   
Sbjct: 479 GMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEA 537

Query: 412 LKV---FFL-------MPEHDQ-----------------VSWNSVIGAFADSEALVSEAV 444
            K+    F+         EH +                 VSWN++I  +   +    +A 
Sbjct: 538 EKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQ-SEDAQ 596

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
           +++  M   G +P+  T+  +L   ++ +   LG Q+HA VIK  +  +  I + L+  Y
Sbjct: 597 RFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMY 656

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            KCG + D   +F + +  RD V+WN+MI GY H+ +  +A+ L   M+      +H TF
Sbjct: 657 SKCGNLHDSRLMFEK-APIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATF 715

Query: 565 ATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
            ++L ACA +  +ERG++  H       L+  +   S +VD+  K G ++ A      MP
Sbjct: 716 VSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMP 775

Query: 624 VR-NVYSWNSMISG 636
              +   W +++S 
Sbjct: 776 FEADDVIWRTLLSA 789



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 207/445 (46%), Gaps = 49/445 (11%)

Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
           +NFS +     CA      LG+Q H   +  G    V VSN LL LY + G L    K+F
Sbjct: 50  ANFSFV--FKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLF 107

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVS------------------------------EAVK 445
             MP  D VSWN++I  +A S  +V                               E+VK
Sbjct: 108 DGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVK 167

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            +++M R+G   +  +F  IL   S     KLG Q+H   ++     +    +ALL  Y 
Sbjct: 168 VFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYA 227

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           KC  +D+   +F  M + ++ +SW+++I+G + N  L   + +   M + G  +    +A
Sbjct: 228 KCKRLDESFTVFYAMPQ-KNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYA 286

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           +VL +CA++  L  G ++HA  +++    D ++ +A +DMY+KC  +  A R FD+    
Sbjct: 287 SVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENL 346

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
           N+ S+N+MI+GY++  +G +AL LF ++       D ++  G L AC+    + EG    
Sbjct: 347 NLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGL--- 403

Query: 686 KSMSQVYGLIPQLEQFS-------CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
               Q++GL  +   FS         +D+ G+   LD+     ++M    +++ W  ++ 
Sbjct: 404 ----QLHGLATK-SNFSRNICVANAFIDMYGKCEALDEACRVFDEMG-RKDAVSWNAIIA 457

Query: 739 ACCRANCRKTELGRKAANMLFEMEP 763
           A  +   R   L    + +   MEP
Sbjct: 458 AHEQNEERSKTLNILVSMLRSGMEP 482


>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 579

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 215/537 (40%), Positives = 336/537 (62%), Gaps = 10/537 (1%)

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           N L+++Y     L+   ++F  MP+ + +SW ++I A++  + +  +A++  + M R G 
Sbjct: 52  NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCK-IHQKALELLVLMLRDGV 110

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            PN  T+ ++L A +  S  ++   +H  +IK  + ++  + +AL+  + K GE +D   
Sbjct: 111 RPNVYTYSSVLRACNGMSDVRM---LHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALS 167

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F  M    D + WNS+I G+  N     A+ L   M + G   +  T  +VL AC  +A
Sbjct: 168 VFDEMVTG-DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 226

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            LE GM+ H   V+   + D+++ +ALVDMY KCG ++ A R F+ M  R+V +W++MIS
Sbjct: 227 LLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMIS 284

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
           G A++G+  +AL LF  MK  G  P+++T VGVL ACSHAGL+++G+ +F+SM ++YG+ 
Sbjct: 285 GLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIN 344

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           P  E + CM+DLLG+AG+LD   + +N+M   P+++ WRT+LGA CR   R   L   AA
Sbjct: 345 PGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA-CRVQ-RNMVLAEYAA 402

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
             +  ++P++A  Y +L+N+YA+  KW+ V + RK M++  +KKE GCSW+ +   +H F
Sbjct: 403 KKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAF 462

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
           + GDESHP+   + +KL +L  ++   GYVP+T F L DLE E  ED + +HSEK+A+AF
Sbjct: 463 IIGDESHPQIVEVNKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAF 522

Query: 876 -VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
            ++T  S+  IRI KNLR+CGDCH   K  SK+  R IV+RD  R+HHF DGKCSCG
Sbjct: 523 GLMTLPSEKVIRIRKNLRICGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSCG 579



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 169/350 (48%), Gaps = 57/350 (16%)

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           NVLI MY       D A ++F+++  R++ISW ++IS YS+        +L   M R+G 
Sbjct: 52  NVLINMYVKFNLLND-AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGV 110

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
           R    PN YT+ S++ A      +G   ++ +   + K GL SD+YV SAL+  FA+LG 
Sbjct: 111 R----PNVYTYSSVLRAC-----NGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGE 161

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG---------------RRK----------------- 274
              A  +F++M+  + +  N ++ G               R K                 
Sbjct: 162 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 221

Query: 275 ---------GKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                    G + H ++++   +D  + + N LV+MY KCG+++D+R VF  M  +D ++
Sbjct: 222 CTGLALLELGMQAHVHIVK---YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVIT 278

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W+TMISGL QNG  +EA+  F  M+  G   +  +++  L +C+  G +  G        
Sbjct: 279 WSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK 338

Query: 385 KL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           KL G++        ++ L   AG L   +K+   M  E D V+W +++GA
Sbjct: 339 KLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 388



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 10/212 (4%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D ++ H  I+K G   DV++ + LI+V+ ++G+   A  +FDEM   +++ W  I+ G+ 
Sbjct: 129 DVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 188

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
               S+ A ++FK M RAGF+  +  L SVLRAC   G +  + GMQ H  ++K +Q  D
Sbjct: 189 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT--GLALLELGMQAHVHIVKYDQ--D 244

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            +++N L+ MY  C    D ARR+F +++ RD+I+W+++IS  +Q G +    KLF  M+
Sbjct: 245 LILNNALVDMYCKCGSLED-ARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMK 303

Query: 183 REGFRYSLKPNEYTF-GSLITAAYSSVLSGSY 213
             G     KPN  T  G L   +++ +L   +
Sbjct: 304 SSG----TKPNYITIVGVLFACSHAGLLEDGW 331



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 133/253 (52%), Gaps = 16/253 (6%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           +FL N LIN+YV+   L  A +LFD+MP RN +SW  ++S Y+   +  +A ++   M+R
Sbjct: 48  MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 107

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
            G   N Y   SVLRAC     +G      +HC ++K     D  V + LI ++    E 
Sbjct: 108 DGVRPNVYTYSSVLRAC-----NGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEP 162

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
            D A  +F+E+ T D I WNSII  ++Q   +    +LF RM+R GF       + T  S
Sbjct: 163 ED-ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGF----IAEQATLTS 217

Query: 200 LITAAYSSVLSGSYLLQ-QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           ++ A      +G  LL+  + A V       DL + +ALV  + + G+   AR++F QM 
Sbjct: 218 VLRAC-----TGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMK 272

Query: 259 QKNVVSMNGLMEG 271
           +++V++ + ++ G
Sbjct: 273 ERDVITWSTMISG 285



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 159/342 (46%), Gaps = 42/342 (12%)

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGK-------------- 276
           +++ + L++ + +      A ++F+QM Q+NV+S   ++    K K              
Sbjct: 48  MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 107

Query: 277 ------------------------EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
                                    +H  +I+ GL   V V + L++++AK G  +D+ S
Sbjct: 108 DGVRPNVYTYSSVLRACNGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALS 167

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           VF  M+  D++ WN++I G  QN   + A+  F  M+R G ++   +L S L +C  L  
Sbjct: 168 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 227

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
           + LG Q H   +K   D D+ ++NAL+ +Y   G L    +VF  M E D ++W+++I  
Sbjct: 228 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISG 285

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVA 491
            A +     EA+K +  M+ +G  PN +T + +L A S   + + G      + K Y + 
Sbjct: 286 LAQN-GYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIN 344

Query: 492 NETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
                   ++   GK G++DD  K+   M    D V+W +++
Sbjct: 345 PGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 386


>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/669 (34%), Positives = 369/669 (55%), Gaps = 33/669 (4%)

Query: 267 GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
           G +     G+ +H  L R+      ++ N L+ MY  CG+  D + VF  M+ K+ VSW 
Sbjct: 98  GKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWV 157

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            +IS   +NG  E+AI  F  M+  G+  ++   +S L SC    ++ LG+Q+H   ++ 
Sbjct: 158 IVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRA 217

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
            L+++++V  A+ ++Y   G+L     VF  M   + V+W  ++  +  ++ L   A++ 
Sbjct: 218 QLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKL-EVALEL 276

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
           +  M   G   +   F  +L          +G Q+H+ ++K    +E ++   L+  Y K
Sbjct: 277 FARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVK 336

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
           CG+++   + F R+SE  D VSW+++ISG+  +  L   + +   +   G  L+ F + +
Sbjct: 337 CGDIESAYRSFGRISEPND-VSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTS 395

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           V  ACA+ A L  G + H   ++  L   +   SA+V MYSKCGR+DYA R F+ +   +
Sbjct: 396 VFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPD 455

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
             +W ++ISGYA HG+  +AL  F +M+  G  P+ VTF+ VL+ACSH+GLV E  ++  
Sbjct: 456 AVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLG 515

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
           SMS+ YG+ P ++ + CM+D   RAG L +  E IN+MP  P+++ W+++LG C  A+C 
Sbjct: 516 SMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGCW-AHC- 573

Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
             +LG+ AA  LF ++P +   Y+LL N+Y++ GKWE+    RK M E E+KKE  CSW+
Sbjct: 574 DLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWI 633

Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSY 866
           ++K  VH                  ++ LN++   +  +P  K  L D            
Sbjct: 634 SVKGQVH----------------RPVRLLNEEDDVSCSLPARKEQLLD------------ 665

Query: 867 HSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFND 925
           HSEK+A+AF +++     PI + KNLR C DCH   K +S + GR+IV+RDS RFHHF  
Sbjct: 666 HSEKLAIAFGLISTEDNAPILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKS 725

Query: 926 GKCSCGDYW 934
           GKCSC DYW
Sbjct: 726 GKCSCNDYW 734



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 137/525 (26%), Positives = 248/525 (47%), Gaps = 57/525 (10%)

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           + +G   EA    KEM  A   +  ++   +  AC +        G  +H  + ++ +  
Sbjct: 63  SKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKL--RSLADGRLIHDRLRRTVKNP 120

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
            G + N L+ MY  C    D  +++F+E+  ++L+SW  +IS Y++ G+     +LFS M
Sbjct: 121 SGSIENCLLRMYCDCGSXID-VQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDM 179

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL--QQILAMVKKAGLLSDLYVGSALVS 239
           Q  G R    PN   + SL+     S L  S+L   +Q+ + V +A L +++ V +A+ +
Sbjct: 180 QASGIR----PNSAVYMSLL----QSCLGPSFLELGKQMHSHVIRAQLNANITVETAICN 231

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------- 274
            + R G    A+ +F+ M  +N V+  GLM G  +                         
Sbjct: 232 MYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFV 291

Query: 275 ----------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                           GK++H ++++ G    V+VG  LV+ Y KCG I+ +   F  + 
Sbjct: 292 FSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRIS 351

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
             + VSW+ +ISG  Q+G  E+ I  F ++R +G++ ++F   S   +CA+   + +G Q
Sbjct: 352 EPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQ 411

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
            HG+ +K GL S +   +A++++Y+  G L    + F  + E D V+W ++I  +A    
Sbjct: 412 AHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYA-YHG 470

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIE 497
             +EA+ ++  M+  G  PN VTFI +L A S   +     Q    + + Y V       
Sbjct: 471 NAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHY 530

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
           + ++  Y + G + +  ++  RM    D +SW S++ G + H +L
Sbjct: 531 DCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGCWAHCDL 575



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 190/375 (50%), Gaps = 6/375 (1%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
             +C  L  +  G+ IH    +   +   S+ N LL +Y D G      KVF  M   + 
Sbjct: 94  FEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNL 153

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSW  VI A+A +  L  +A++ + DM+ +G  PN   ++++L +    S  +LG Q+H+
Sbjct: 154 VSWVIVISAYAKNGEL-EKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHS 212

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
            VI+  +    T+E A+ + Y +CG ++  + +F  M + ++ V+W  ++ GY   + L 
Sbjct: 213 HVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGM-DAQNAVTWTGLMVGYTQAKKLE 271

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
            A+ L   M   G  LD F F+ VL  C  +   + G ++H+  V+   E +V +G+ LV
Sbjct: 272 VALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLV 331

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           D Y KCG I+ A R F  +   N  SW+++ISG+++ G  +  + +F+ ++ +G + +  
Sbjct: 332 DFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSF 391

Query: 664 TFVGVLSACSHAGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFIN 722
            +  V  AC+    ++ G + H  ++ +  GL+  L   S MV +  + G LD       
Sbjct: 392 IYTSVFQACAAQANLNMGSQAHGDAIKR--GLVSYLYGESAMVTMYSKCGRLDYARRAFE 449

Query: 723 KMPITPNSLIWRTVL 737
            +   P+++ W  ++
Sbjct: 450 SID-EPDAVAWTAII 463



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 215/474 (45%), Gaps = 56/474 (11%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D +L H ++ +        + N L+ +Y   G      K+FDEM  +N VSW  ++S Y 
Sbjct: 105 DGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYA 164

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G   +A ++F +M  +G   N     S+L++C   GPS  + G Q+H  V+++    +
Sbjct: 165 KNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSC--LGPSFLELGKQMHSHVIRAQLNAN 222

Query: 123 GLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
             V   +  MY  C  LE    A+ +F+ ++ ++ ++W  ++  Y+Q        +LF+R
Sbjct: 223 ITVETAICNMYVRCGWLEG---AKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFAR 279

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M  EG    ++ +E+ F   I       L    + +QI + + K G  S++ VG+ LV  
Sbjct: 280 MAMEG----VELDEFVFS--IVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDF 333

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------- 274
           + + G+   A + F ++ + N VS + L+ G  +                          
Sbjct: 334 YVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIY 393

Query: 275 ---------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                          G + HG  I+ GL   +   + +V MY+KCG +D +R  F  +  
Sbjct: 394 TSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDE 453

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
            D+V+W  +ISG   +G   EA+  F  M+  G+  +  + I+ L++C+  G +   +Q 
Sbjct: 454 PDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQY 513

Query: 380 HGE-GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIG 431
            G      G+   +   + ++  Y+ AG L   L++   MP E D +SW S++G
Sbjct: 514 LGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLG 567



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 131/273 (47%), Gaps = 19/273 (6%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  I+K G   +V +   L++ YV+ GD+ SA + F  + + N VSW+ ++SG++  
Sbjct: 309 KQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQS 368

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   +  K+F  +   G +LN +   SV +AC     +    G Q H   +K      GL
Sbjct: 369 GRLEDCIKIFTSLRSEGVVLNSFIYTSVFQAC--AAQANLNMGSQAHGDAIKR-----GL 421

Query: 125 VS-----NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           VS     + ++ MY  C    D ARR FE I+  D ++W +IIS Y+  G+       F 
Sbjct: 422 VSYLYGESAMVTMYSKC-GRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFR 480

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           RMQ     Y ++PN  TF +++TA   S L      Q + +M +  G+   +     ++ 
Sbjct: 481 RMQ----SYGVRPNAVTFIAVLTACSHSGLVAE-AKQYLGSMSRDYGVKPTIDHYDCMID 535

Query: 240 GFARLGNFYYARKIFEQM-IQKNVVSMNGLMEG 271
            ++R G    A ++  +M  + + +S   L+ G
Sbjct: 536 TYSRAGLLXEALELINRMPFEPDAMSWKSLLGG 568


>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial; Flags: Precursor
 gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 628

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/609 (37%), Positives = 344/609 (56%), Gaps = 10/609 (1%)

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           IS L  NG  +EA++    +   G         + L++C     +  GQ++H   +K   
Sbjct: 27  ISQLCSNGRLQEALLEMAML---GPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRY 83

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
                +   LL  Y     L    KV   MPE + VSW ++I  ++ +    SEA+  + 
Sbjct: 84  LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT-GHSSEALTVFA 142

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
           +M R+   PN  TF  +L +    S   LG Q+H  ++K+N  +   + ++LL  Y K G
Sbjct: 143 EMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAG 202

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
           ++ +  +IF  + ER D VS  ++I+GY    L  +A+ +   +   G   ++ T+A++L
Sbjct: 203 QIKEAREIFECLPER-DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLL 261

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
           +A + +A L+ G + H   +R  L F  V+ ++L+DMYSKCG + YA R FD MP R   
Sbjct: 262 TALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAI 321

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKS 687
           SWN+M+ GY++HG G + L LF  M+ +  + PD VT + VLS CSH  + D G   F  
Sbjct: 322 SWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDG 381

Query: 688 M-SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
           M +  YG  P  E + C+VD+LGRAG +D+  EFI +MP  P + +  ++LGAC R +  
Sbjct: 382 MVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGAC-RVHL- 439

Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
             ++G      L E+EP+NA NYV+L+N+YAS G+W DV   R  M +  V KE G SW+
Sbjct: 440 SVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWI 499

Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSY 866
             +  +H F A D +HP ++ +  K+KE++ KM+ AGYVP     L+D++ E KE ++  
Sbjct: 500 QHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLG 559

Query: 867 HSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFND 925
           HSEK+A+ F ++     +PIR+ KNLR+C DCH+  K  SK+  RE+ LRD NRFH   D
Sbjct: 560 HSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVD 619

Query: 926 GKCSCGDYW 934
           G CSCGDYW
Sbjct: 620 GICSCGDYW 628



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 183/368 (49%), Gaps = 11/368 (2%)

Query: 265 MNGLMEGR--RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
           +N  ++ R  R G+ VH ++I++       +   L+  Y KC  ++D+R V   M  K+ 
Sbjct: 59  LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           VSW  MIS   Q G   EA+  F  M R     + F+  + L+SC     + LG+QIHG 
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL 178

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            +K   DS + V ++LL +YA AG +    ++F  +PE D VS  ++I  +A    L  E
Sbjct: 179 IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL-GLDEE 237

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           A++ +  +   G SPN VT+ ++L A S  ++   G Q H  V++  +     ++N+L+ 
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM-QRGQRLDH 561
            Y KCG +    ++F  M E R  +SWN+M+ GY  + L  + + L   M  ++  + D 
Sbjct: 298 MYSKCGNLSYARRLFDNMPE-RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDA 356

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA----LVDMYSKCGRIDYASR 617
            T   VLS C+     + G+ +    V    E+    G+     +VDM  + GRID A  
Sbjct: 357 VTLLAVLSGCSHGRMEDTGLNIFDGMVAG--EYGTKPGTEHYGCIVDMLGRAGRIDEAFE 414

Query: 618 FFDLMPVR 625
           F   MP +
Sbjct: 415 FIKRMPSK 422



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 148/283 (52%), Gaps = 18/283 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +D +  H  ++K  +    +L   L+  Y +   L  A K+ DEMP++N VSW  ++S Y
Sbjct: 69  RDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRY 128

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G S+EA  +F EM+R+    N +   +VL +C     SG   G Q+H L++K N   
Sbjct: 129 SQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRA--SGLGLGKQIHGLIVKWNYDS 186

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V + L+ MY    +  + AR IFE +  RD++S  +II+ Y+Q G      ++F R+
Sbjct: 187 HIFVGSSLLDMYAKAGQIKE-AREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL---QQILAMVKKAGLLSDLYVGSALV 238
             EG    + PN  T+ SL+TA     LSG  LL   +Q    V +  L     + ++L+
Sbjct: 246 HSEG----MSPNYVTYASLLTA-----LSGLALLDHGKQAHCHVLRRELPFYAVLQNSLI 296

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---GKEV 278
             +++ GN  YAR++F+ M ++  +S N ++ G  K   G+EV
Sbjct: 297 DMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREV 339



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 6/200 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  I+K  +   +F+ ++L+++Y + G +  A ++F+ +P+R+ VS   I++GY  
Sbjct: 172 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQ 231

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+  EA +MF  +   G   N     S+L A    G +    G Q HC VL+    F  
Sbjct: 232 LGLDEEALEMFHRLHSEGMSPNYVTYASLLTALS--GLALLDHGKQAHCHVLRRELPFYA 289

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           ++ N LI MY  C  +   ARR+F+ +  R  ISWN+++  YS+ G    V +LF  M+ 
Sbjct: 290 VLQNSLIDMYSKC-GNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRD 348

Query: 184 EGFRYSLKPNEYTFGSLITA 203
           E     +KP+  T  ++++ 
Sbjct: 349 EK---RVKPDAVTLLAVLSG 365


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 248/668 (37%), Positives = 378/668 (56%), Gaps = 61/668 (9%)

Query: 268 LMEGRRKGKEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFM--------- 317
           LM+  R G+ VHG +IR G+ FD+    N L+NMY+K  ++++   V RF          
Sbjct: 22  LMKDLRFGESVHGCIIRLGMGFDLYTC-NALMNMYSKFWSLEEG-GVQRFCDSKMLGGIP 79

Query: 318 ----IGKDSVS------WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
               IGK S S       +  ++G+DQNG   +             MS+    ++T    
Sbjct: 80  EPREIGKCSNSHDLPCELDERVAGIDQNGDLNQ-------------MSNILYQVNTY--- 123

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
                    +++  EG           S+       ++ YL    KVF +MP+ D VSWN
Sbjct: 124 ---------KKVFDEG---------KTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWN 165

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           +VI   A +  +  +A+    +M  A   P+  T  ++L   + +     G ++H   I+
Sbjct: 166 TVISGNAQN-GMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIR 224

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
                +  I ++L+  Y KC  +DD  ++F  M  + D +SWNS+I+G + N +  + + 
Sbjct: 225 NGYDADVFIGSSLIDMYAKCTRVDDSCRVF-YMLPQHDGISWNSIIAGCVQNGMFDEGLK 283

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
               M+    + +H +F++++ ACA + TL  G ++H   +R+  + +V I SALVDMY+
Sbjct: 284 FFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYA 343

Query: 608 KCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVG 667
           KCG I  A   FD M + ++ SW +MI GYA HGH   A++LF +M+++G  P++V F+ 
Sbjct: 344 KCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMA 403

Query: 668 VLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPIT 727
           VL+ACSHAGLVDE +K+F SM+Q Y +IP LE ++ + DLLGR G L++  EFI+ M I 
Sbjct: 404 VLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIE 463

Query: 728 PNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
           P   +W T+L A CR + +  EL  K +  LF ++PQN   YVLL+N+Y++ G+W+D  K
Sbjct: 464 PTGSVWSTLLAA-CRVH-KNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARK 521

Query: 788 ARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQ 847
            R AM++  +KK+  CSW+ +K+ VH FVAGD+SHP  D I E LK L ++M   GYV  
Sbjct: 522 LRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLD 581

Query: 848 TKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISK 906
           T   L D+E E K  L+  HSE++A+ F +++  +   IR+ KNLRVC DCH+A KFISK
Sbjct: 582 TTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISK 641

Query: 907 IVGREIVL 914
           IVGREIV 
Sbjct: 642 IVGREIVF 649



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 194/437 (44%), Gaps = 71/437 (16%)

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY--- 133
           M+ +G   +     SVL++C        +FG  VH  +++    FD    N L+ MY   
Sbjct: 1   MLASGKYPDHNVFPSVLKSCTLM--KDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKF 58

Query: 134 --------------------------GSCLESTDCARRIFEEI----ETRDLISWNSI-- 161
                                     G C  S D    + E +    +  DL   ++I  
Sbjct: 59  WSLEEGGVQRFCDSKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNILY 118

Query: 162 -ISVYSQRGDTISVFKLFSRMQREGFRY-SLKPNEYTFGSLITAAYSSVLSGSY---LLQ 216
            ++ Y +  D      ++S+ ++E +   SL+            ++++V+SG+    + +
Sbjct: 119 QVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHE 178

Query: 217 QILAMVKKAG---LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR 273
             L MV++ G   L  D +  S+++  FA   N                           
Sbjct: 179 DALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLL------------------------- 213

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           KGKE+HGY IR+G    V +G+ L++MYAKC  +DDS  VF  +   D +SWN++I+G  
Sbjct: 214 KGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCV 273

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           QNG ++E +  F  M    +  ++ S  S + +CA L  + LG+Q+HG  ++   D +V 
Sbjct: 274 QNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVF 333

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           +++AL+ +YA  G +     +F  M  +D VSW ++I  +A       +A+  +  M   
Sbjct: 334 IASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYA-LHGHAYDAISLFKRMEVE 392

Query: 454 GWSPNGVTFINILAAAS 470
           G  PN V F+ +L A S
Sbjct: 393 GVKPNYVAFMAVLTACS 409



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 109/202 (53%), Gaps = 11/202 (5%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H   +++G+  DVF+ ++LI++Y +   +  + ++F  +P  + +SW  I++G   
Sbjct: 215 GKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQ 274

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            GM +E  K F++M+ A    N  +  S++ AC     +    G Q+H  +++S   FDG
Sbjct: 275 NGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHL--TTLHLGKQLHGYIIRSR--FDG 330

Query: 124 --LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              +++ L+ MY  C  +   AR IF+++E  D++SW ++I  Y+  G       LF RM
Sbjct: 331 NVFIASALVDMYAKC-GNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM 389

Query: 182 QREGFRYSLKPNEYTFGSLITA 203
           + EG    +KPN   F +++TA
Sbjct: 390 EVEG----VKPNYVAFMAVLTA 407



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 116/236 (49%), Gaps = 9/236 (3%)

Query: 36  LASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRA 95
           L S  K+F+ MP R+ VSW  ++SG    GM  +A  M +EM  A    + + L SVL  
Sbjct: 146 LGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPI 205

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDL 155
             E        G ++H   +++    D  + + LI MY  C    D   R+F  +   D 
Sbjct: 206 FAEY--VNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSC-RVFYMLPQHDG 262

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL 215
           ISWNSII+   Q G      K F +M        +KPN  +F S++ A   + L+  +L 
Sbjct: 263 ISWNSIIAGCVQNGMFDEGLKFFQQM----LIAKIKPNHVSFSSIMPAC--AHLTTLHLG 316

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           +Q+   + ++    ++++ SALV  +A+ GN   AR IF++M   ++VS   ++ G
Sbjct: 317 KQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMG 372



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 52/97 (53%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  I++  F  +VF+ + L+++Y + G++ +A  +FD+M   + VSW  ++ GY  
Sbjct: 316 GKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYAL 375

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G + +A  +FK M   G   N  A  +VL AC   G
Sbjct: 376 HGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAG 412



 Score = 46.2 bits (108), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 33/57 (57%)

Query: 552 MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
           M+  G+  DH  F +VL +C  +  L  G  VH C +R  + FD+   +AL++MYSK
Sbjct: 1   MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSK 57


>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/606 (38%), Positives = 344/606 (56%), Gaps = 43/606 (7%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA--DAGYLSRCLKVFFLMPEH 421
           L SC+++  +   +Q H + ++LGL +D      ++   A   +G L+  L+VF  +P  
Sbjct: 27  LDSCSTMAEL---KQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHP 83

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D   +N++   +   + L    +  Y  M     SPN  T+  ++ A       + G Q+
Sbjct: 84  DAYIYNTIFRGYLRWQ-LARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQI 142

Query: 482 HAQVIKYNVA--------------NETTIENA-----------------LLSCYGKCGEM 510
           HA V+K+                 N  ++E A                 L++ Y + G +
Sbjct: 143 HAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFV 202

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
           D   ++F  M ER + VSWN+MI+ Y+ +  L +A  L   M      LD F  A++LSA
Sbjct: 203 DKAREVFELMPER-NSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSA 261

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
           C  +  LE+G  +H    ++ +E D  + + ++DMY KCG ++ AS  F+ +P + + SW
Sbjct: 262 CTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSW 321

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           N MI G A HG G+ A+ LF +M+ +   PD +TFV VLSAC+H+GLV+EG  +F+ M++
Sbjct: 322 NCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTE 381

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTE 749
           V GL P +E F CMVDLLGRAG L++  + IN+MP+ P++ +   ++GAC    N   TE
Sbjct: 382 VLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGN---TE 438

Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMK 809
           LG +    + E+EP N+  YVLLAN+YAS G+WEDVAK RK M +  VKK  G S +  +
Sbjct: 439 LGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESE 498

Query: 810 DGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSE 869
            GV  F+AG  +HP+   IY KL E+ + +R  GYVP T   L D++ E KE+ + YHSE
Sbjct: 499 SGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSE 558

Query: 870 KIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKC 928
           K+A+AF +L       +RI KNLR+C DCH A K ISK+  REI++RD NRFHHF  G C
Sbjct: 559 KLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGC 618

Query: 929 SCGDYW 934
           SC DYW
Sbjct: 619 SCKDYW 624



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 190/423 (44%), Gaps = 47/423 (11%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLIN--VYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           + K +H QI++ G + D      +I      + GDL  A ++FD++P  ++  +  I  G
Sbjct: 35  ELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRG 94

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y    ++     M+  M+      N++    ++RAC  C     + G Q+H  VLK    
Sbjct: 95  YLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRAC--CIDYAIEEGKQIHAHVLKFGFG 152

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            DG   N LI MY +  +S + ARR+F+ +  RD++SW S+I+ YSQ G        F  
Sbjct: 153 ADGFSLNNLIHMYVN-FQSLEQARRVFDNMPQRDVVSWTSLITGYSQWG--------FVD 203

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL---LSDLYVGSAL 237
             RE F    + N  ++ ++I AAY      S  L +  A+  +  L   + D +V +++
Sbjct: 204 KAREVFELMPERNSVSWNAMI-AAYVQ----SNRLHEAFALFDRMRLENVVLDKFVAASM 258

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGL 297
           +S    LG                            +GK +HGY+ +SG+     +   +
Sbjct: 259 LSACTGLGAL-------------------------EQGKWIHGYIEKSGIELDSKLATTV 293

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           ++MY KCG ++ +  VF  +  K   SWN MI GL  +G  E AI  F  M R+ +    
Sbjct: 294 IDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDG 353

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
            + ++ LS+CA  G +  G+       + LGL   +     ++ L   AG L    K+  
Sbjct: 354 ITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLIN 413

Query: 417 LMP 419
            MP
Sbjct: 414 EMP 416



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 177/388 (45%), Gaps = 45/388 (11%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A  +F++I   D   +N+I   Y +     +   ++SRM       S+ PN++T+  LI 
Sbjct: 73  ALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRM----LHKSVSPNKFTYPPLIR 128

Query: 203 AAY--SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
           A     ++  G    +QI A V K G  +D +  + L+  +    +   AR++F+ M Q+
Sbjct: 129 ACCIDYAIEEG----KQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQR 184

Query: 261 NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
           +VVS   L+ G                             Y++ G +D +R VF  M  +
Sbjct: 185 DVVSWTSLITG-----------------------------YSQWGFVDKAREVFELMPER 215

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           +SVSWN MI+   Q+    EA   F  MR + ++   F   S LS+C  LG +  G+ IH
Sbjct: 216 NSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIH 275

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
           G   K G++ D  ++  ++ +Y   G L +  +VF  +P+    SWN +IG  A      
Sbjct: 276 GYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLA-MHGKG 334

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM---GKLGHQVHAQVIKYNVANETTIE 497
             A++ + +M R   +P+G+TF+N+L+A +   +   GK   Q   +V+      E    
Sbjct: 335 EAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHF-- 392

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRD 525
             ++   G+ G +++  K+   M    D
Sbjct: 393 GCMVDLLGRAGLLEEARKLINEMPVNPD 420



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 148/357 (41%), Gaps = 53/357 (14%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ K  H  +LK GF  D F  N LI++YV    L  A ++FD MP R+ VSW  +++GY
Sbjct: 137 EEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGY 196

Query: 62  THKGMSN-------------------------------EACKMFKEMVRAGFLLNRYALG 90
           +  G  +                               EA  +F  M     +L+++   
Sbjct: 197 SQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAA 256

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS--CLESTDCARRIFE 148
           S+L AC   G    + G  +H  + KS    D  ++  +I MY    CLE    A  +F 
Sbjct: 257 SMLSAC--TGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEK---ASEVFN 311

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS- 207
           E+  + + SWN +I   +  G   +  +LF  M+RE     + P+  TF ++++A   S 
Sbjct: 312 ELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMERE----MVAPDGITFVNVLSACAHSG 367

Query: 208 -VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN 266
            V  G +  Q    M +  GL   +     +V    R G    ARK+  +M       + 
Sbjct: 368 LVEEGKHYFQY---MTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVL 424

Query: 267 GLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFRFM 317
           G + G  R  G    G  I   + ++    +G    L N+YA  G  +D   V + M
Sbjct: 425 GALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLM 481



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 156/387 (40%), Gaps = 44/387 (11%)

Query: 276 KEVHGYLIRSGL-FDMVAVGNGL-VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           K+ H  +IR GL  D  A+G  +     +K G ++ +  VF  +   D+  +NT+  G  
Sbjct: 37  KQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYL 96

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           +       I  +  M    +  + F+    + +C     I  G+QIH   LK G  +D  
Sbjct: 97  RWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGF 156

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQ------------------------------ 423
             N L+ +Y +   L +  +VF  MP+ D                               
Sbjct: 157 SLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERN 216

Query: 424 -VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
            VSWN++I A+  S  L  EA   +  MR      +     ++L+A +     + G  +H
Sbjct: 217 SVSWNAMIAAYVQSNRL-HEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIH 275

Query: 483 AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
             + K  +  ++ +   ++  Y KCG ++   ++F  + ++    SWN MI G   +   
Sbjct: 276 GYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGIS-SWNCMIGGLAMHGKG 334

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-----VHACGVRACLEFDVV 597
             A+ L   M +     D  TF  VLSACA    +E G           G++  +E    
Sbjct: 335 EAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEH--- 391

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPV 624
               +VD+  + G ++ A +  + MPV
Sbjct: 392 -FGCMVDLLGRAGLLEEARKLINEMPV 417


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 272/760 (35%), Positives = 406/760 (53%), Gaps = 68/760 (8%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           AR I  EIE  D + +NS+IS+YS+ GD      +F  M R G R               
Sbjct: 86  ARLIEFEIEP-DSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKR--------------- 129

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
                                      D+   SA+++ F   G  + A K+F + ++  +
Sbjct: 130 ---------------------------DVVSWSAMMACFGNNGREFDAIKLFVEFLEMGL 162

Query: 263 VSMNGLMEGRRK----------GKEVHGYLIRSGLFDM-VAVGNGLVNMYAKC-GTIDDS 310
           V  +       +          G+ + G+L+++G F+  V VG  L++M+ K   + +++
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222

Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
             VF  M   + V+W  MI+   Q G   EAI  F  M   G  S  F+L S  S+CA L
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA---GYLSRCLKVFFLMPEHDQVSWN 427
             + LG+Q+H   ++ GL  DV  S  L+ +YA     G +  C KVF  M +H  +SW 
Sbjct: 283 ENLSLGRQLHSWAIRSGLADDVECS--LVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWT 340

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGW-SPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
           ++I  +  +  L +EA+  + +M   G   PN  TF +   A  + S  ++G QV     
Sbjct: 341 ALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAF 400

Query: 487 KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAM 546
           K  +A+ +++ N+++S + KC  M+D    F  +SE+ + VS+N+ + G   N     A 
Sbjct: 401 KRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEK-NLVSYNTFLDGTCRNLDFEHAF 459

Query: 547 NLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMY 606
            L+  + +R   +  FTFA++LS  A+V +L +G ++H+  ++  L  +  + +AL+ MY
Sbjct: 460 ELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMY 519

Query: 607 SKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFV 666
           SKCG ID ASR F LM  RNV SW SMI+G+A+HG  ++ L  F+QM  +G  P+ VT+V
Sbjct: 520 SKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYV 579

Query: 667 GVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPI 726
            +LSACSH GLV EG++HF SM + + + P++E ++CMVDLL RAG L    EFIN MP 
Sbjct: 580 AILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPF 639

Query: 727 TPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVA 786
             + L+WRT LGA CR +   TELG+ AA  + E +P     Y+ L+N+YAS GKWE+  
Sbjct: 640 QADVLVWRTFLGA-CRVH-SNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEEST 697

Query: 787 KARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVP 846
           + R+ MKE  + KE GCSW+ + D VH F  GD SHP    IY++L  L  +++  GYVP
Sbjct: 698 EMRRKMKERNLVKEGGCSWIEVGDKVHKFYVGDTSHPNAHQIYDELDWLITEIKRCGYVP 757

Query: 847 QTKFALFDLEPESKED----LVSYHSEKIAVAFVLTRNSK 882
            T   L  LE E  E     L+  HSEKIAVAF L   +K
Sbjct: 758 DTDLVLHKLEEEDDEAKKEMLLYQHSEKIAVAFGLISTAK 797



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 244/517 (47%), Gaps = 61/517 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP---DRNSVSWACIVSG 60
            KL H ++++     D  L N+LI++Y + GDL  A  +F+ M     R+ VSW+ +++ 
Sbjct: 81  GKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMAC 140

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ- 119
           + + G   +A K+F E +  G + N Y   +V+RAC      G   G  +   ++K+   
Sbjct: 141 FGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVG--VGRVILGFLMKTGHF 198

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D  V   LI M+     S + A ++F+++   ++++W  +I+   Q G      + F 
Sbjct: 199 ESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFL 258

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
            M   GF    + +++T  S+ +A   + L    L +Q+ +   ++GL  D  V  +LV 
Sbjct: 259 DMVLSGF----ESDKFTLSSVFSAC--AELENLSLGRQLHSWAIRSGLADD--VECSLVD 310

Query: 240 GFARL---GNFYYARKIFEQMIQKNVVSMNGLMEG------------------------- 271
            +A+    G+    RK+F++M   +V+S   L+ G                         
Sbjct: 311 MYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVE 370

Query: 272 ------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
                              R GK+V G+  + GL    +V N +++M+ KC  ++D+R+ 
Sbjct: 371 PNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTA 430

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           F  +  K+ VS+NT + G  +N  +E A      +    L  S F+  S LS  A++G +
Sbjct: 431 FESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSL 490

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
             G+QIH + LKLGL  +  V NAL+S+Y+  G +    +VF LM   + +SW S+I  F
Sbjct: 491 RKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGF 550

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
           A         ++ +  M + G  PN VT++ IL+A S
Sbjct: 551 A-KHGFAERVLETFNQMTKEGVKPNEVTYVAILSACS 586



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 222/474 (46%), Gaps = 65/474 (13%)

Query: 11  ILKHG-FAYDVFLCNTLINVYVR-VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSN 68
           ++K G F  DV +  +LI+++V+      +A K+FD+M + N V+W  +++     G   
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251

Query: 69  EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV 128
           EA + F +MV +GF  +++ L SV  AC E        G Q+H   ++S    D  V   
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAEL--ENLSLGRQLHSWAIRSGLADD--VECS 307

Query: 129 LIAMYGSCLE--STDCARRIFEEIETRDLISWNSIISVYSQRGD-TISVFKLFSRMQREG 185
           L+ MY  C    S D  R++F+ ++   ++SW ++I+ Y Q  +       LFS M  +G
Sbjct: 308 LVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQG 367

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
               ++PN +TF S   A  +  +S   + +Q+L    K GL S+  V ++++S F +  
Sbjct: 368 ---HVEPNHFTFSSAFKACGN--VSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCD 422

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGR--------------------------------- 272
               AR  FE + +KN+VS N  ++G                                  
Sbjct: 423 RMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLS 482

Query: 273 --------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                   RKG+++H  +++ GL     V N L++MY+KCG+ID +  VF  M  ++ +S
Sbjct: 483 GVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVIS 542

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA-----SLGWIMLGQQI 379
           W +MI+G  ++G  E  +  F  M ++G+  +  + ++ LS+C+     S GW       
Sbjct: 543 WTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMY 602

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
               +K  ++        ++ L   AG L+   +    MP + D + W + +GA
Sbjct: 603 EDHKIKPKMEHYA----CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 176/339 (51%), Gaps = 17/339 (5%)

Query: 348 MRRDGLMS-SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
           M RDG+    + +  S L SC       LG+ +H   ++  ++ D  + N+L+SLY+ +G
Sbjct: 52  MARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSG 111

Query: 407 YLSRCLKVFFLM---PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
            L++   VF  M    + D VSW++++  F ++     +A+K +++    G  PN   + 
Sbjct: 112 DLTKAKDVFETMGRFGKRDVVSWSAMMACFGNN-GREFDAIKLFVEFLEMGLVPNDYCYT 170

Query: 464 NILAAASSFSMGKLGHQVHAQVIKY-NVANETTIENALLSCYGKCGE--MDDCEKIFARM 520
            ++ A S+     +G  +   ++K  +  ++  +  +L+  + K GE   ++  K+F +M
Sbjct: 171 AVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKM 229

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
           SE  + V+W  MI+  +      +A+     M+  G   D FT ++V SACA +  L  G
Sbjct: 230 SE-LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKC---GRIDYASRFFDLMPVRNVYSWNSMISGY 637
            ++H+  +R+ L  DV    +LVDMY+KC   G +D   + FD M   +V SW ++I+GY
Sbjct: 289 RQLHSWAIRSGLADDV--ECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGY 346

Query: 638 ARHGH-GDKALTLFSQMKLDGPL-PDHVTFVGVLSACSH 674
            ++ +   +A+ LFS+M   G + P+H TF     AC +
Sbjct: 347 MQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 166/356 (46%), Gaps = 18/356 (5%)

Query: 450 MRRAGWSP-NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
           M R G  P + VTF ++L +       +LG  VHA++I++ +  ++ + N+L+S Y K G
Sbjct: 52  MARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSG 111

Query: 509 EMDDCEKIFARMSE--RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
           ++   + +F  M    +RD VSW++M++ + +N     A+ L    ++ G   + + +  
Sbjct: 112 DLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTA 171

Query: 567 VLSACASVATLERGMEVHACGVRAC-LEFDVVIGSALVDMYSKC-GRIDYASRFFDLMPV 624
           V+ AC++   +  G  +    ++    E DV +G +L+DM+ K     + A + FD M  
Sbjct: 172 VIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
            NV +W  MI+   + G   +A+  F  M L G   D  T   V SAC+    +  G + 
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG-RQ 290

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRA---GELDKIEEFINKMPITPNSLIWRTVLGACC 741
             S +   GL   +E    +VD+  +    G +D   +  ++M    +S++  T L    
Sbjct: 291 LHSWAIRSGLADDVE--CSLVDMYAKCSADGSVDDCRKVFDRM--QDHSVMSWTALITGY 346

Query: 742 RANCRKTELGRKAANMLFEMEPQNAV--NYVLLANMYASGGKWEDVAKARKAMKEA 795
             NC    L  +A N+  EM  Q  V  N+   ++ + + G   D    ++ +  A
Sbjct: 347 MQNC---NLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHA 399



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 54/99 (54%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H Q+LK G + +  +CN LI++Y + G + +AS++F  M +RN +SW  +++G+
Sbjct: 491 RKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGF 550

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G +    + F +M + G   N     ++L AC   G
Sbjct: 551 AKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVG 589


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 248/734 (33%), Positives = 392/734 (53%), Gaps = 24/734 (3%)

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN----------VVS 264
           +   LA V+ +    D ++ + ++ GFA  G    A   +  M+             VV 
Sbjct: 59  MHDALAAVRSS---PDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVK 115

Query: 265 MNGLMEGRRKGKEVHGYLIRSGLF-DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
               +    +G+  H   IR GL    V  GN L+  YAK G + D+  VF  M  +D V
Sbjct: 116 CCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIV 175

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN--FSLISTLSSCASLGWIMLGQQIHG 381
           +WN+M+ G   NG    A+  F  M  +GL   +    +I+ L++C     +M G+++H 
Sbjct: 176 TWNSMVDGYVSNGLGALALDCFREMH-EGLQVQHDGVGIIAALAACCLDSALMQGREVHA 234

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             ++ GL+ DV V  +LL +Y   G ++    +F  MP    V+WN +IG +A       
Sbjct: 235 YVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYA-LNGCPE 293

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           EA   ++ M+  G     VT IN+LAA +       G  VH  V +        +E ALL
Sbjct: 294 EAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALL 353

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
             Y K G++   E IF +M+ +   VSWN+MI+ Y++ E+  +A+ L   ++ +    D+
Sbjct: 354 EMYSKVGKVKSSETIFGQMTNK-TLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDY 412

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
           FT + V+ A   +  L +  ++H+  VR     + ++ +A++ MY++CG +  + + FD 
Sbjct: 413 FTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDK 472

Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           M  ++V SWN++I GYA HG G  AL +FS+MK +G  P+  TFV VL+ACS +G+ DEG
Sbjct: 473 MAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEG 532

Query: 682 FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACC 741
           +  F  M + YG+IPQ+E + CM DLLGRAG+L ++ +FI  +PITP   IW ++L A  
Sbjct: 533 WIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTA-- 590

Query: 742 RANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA 801
             N    ++   AA  +FE+E  N   YV+L++MYA  G+WEDV + R +M E  +++  
Sbjct: 591 SRNRNDIDIAEYAAERIFELEHDNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTD 650

Query: 802 GCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKE 861
             S V +      FV GD +HP+   I+E    L++K+ +  Y P+       L    + 
Sbjct: 651 ARSIVELHGSSCSFVNGDMTHPQSKTIHEVSDVLSRKIGETDY-PRNLSDPISLT-SRRT 708

Query: 862 DLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRF 920
            + + HS ++AV F +++  ++ PI + KN+R+C  CH A K ISK   R IV+ D+N +
Sbjct: 709 IIPNKHSVRLAVVFGLISSEARAPILVKKNVRICNHCHHALKLISKYSRRRIVVGDTNIY 768

Query: 921 HHFNDGKCSCGDYW 934
           H F DG C CGDYW
Sbjct: 769 HEFLDGSCCCGDYW 782



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 195/447 (43%), Gaps = 58/447 (12%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +V+  N+L+  Y ++G +A A ++FD MP R+ V+W  +V GY   G+   A   F+EM 
Sbjct: 142 EVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREM- 200

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             G  +    +G +      C  S    G +VH  V++     D  V   L+ MY  C  
Sbjct: 201 HEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKC-G 259

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
           +   A  +F  + +R +++WN +I  Y+  G     F  F +M+ EG +  +     T  
Sbjct: 260 AIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEV----VTAI 315

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           +L+ A   +    S   + +   V ++  L  + + +AL+  ++++G    +  IF QM 
Sbjct: 316 NLLAACAQT--ESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMT 373

Query: 259 QKNVVSMNGLMEGR-----------------------------------------RKGKE 277
            K +VS N ++                                            R+ ++
Sbjct: 374 NKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQ 433

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +H Y++R    +   V N +++MYA+CG +  SR +F  M GKD +SWNT+I G   +G 
Sbjct: 434 MHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQ 493

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSC-----ASLGWIMLGQQIHGEGLKLGLDSDV 392
            + A+  F  M+ +GL  +  + +S L++C     A  GWI    Q +      G+   +
Sbjct: 494 GKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWI----QFNLMQRDYGIIPQI 549

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMP 419
                +  L   AG L   LK    +P
Sbjct: 550 EHYGCMTDLLGRAGDLREVLKFIESIP 576



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 132/267 (49%), Gaps = 15/267 (5%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +++HG   DV +  +L+++Y + G +ASA  +F  MP R  V+W C++ GY   G  
Sbjct: 233 HAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCP 292

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA   F +M   G  +      ++L AC +   S   +G  VH  V +S      ++  
Sbjct: 293 EEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESS--LYGRSVHGYVTRSQFLPHVVLET 350

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY S +     +  IF ++  + L+SWN++I+ Y  +        LF  +  +   
Sbjct: 351 ALLEMY-SKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQ--- 406

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAM---VKKAGLLSDLYVGSALVSGFARL 244
             L P+ +T  +++ A    VL G  LL+Q   M   + +     +  V +A++  +AR 
Sbjct: 407 -PLYPDYFTMSAVVPAF---VLLG--LLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARC 460

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG 271
           G+   +RKIF++M  K+V+S N ++ G
Sbjct: 461 GDVVSSRKIFDKMAGKDVISWNTIIMG 487



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 150/319 (47%), Gaps = 14/319 (4%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  + +  F   V L   L+ +Y +VG + S+  +F +M ++  VSW  +++ Y +K M 
Sbjct: 334 HGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMY 393

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           NEA  +F E++      + + + +V+ A    G    +   Q+H  +++ +   + LV+N
Sbjct: 394 NEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGL--LRQCRQMHSYIVRLDYGENTLVTN 451

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            ++ MY  C +    +R+IF+++  +D+ISWN+II  Y+  G      ++FS M+  G  
Sbjct: 452 AVMHMYARCGDVVS-SRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNG-- 508

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             L+PNE TF S++TA   S ++    +Q  L M +  G++  +     +     R G+ 
Sbjct: 509 --LQPNESTFVSVLTACSVSGMADEGWIQFNL-MQRDYGIIPQIEHYGCMTDLLGRAGDL 565

Query: 248 YYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMY 301
               K  E + I         L+   R   ++         +F++     G    L +MY
Sbjct: 566 REVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFELEHDNTGCYVILSSMY 625

Query: 302 AKCGTIDDSRSVFRFMIGK 320
           A  G  +D + +   M+ K
Sbjct: 626 ADAGRWEDVQRIRSSMMEK 644



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H  I++  +  +  + N ++++Y R GD+ S+ K+FD+M  ++ +SW  I+ GY
Sbjct: 429 RQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGY 488

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G    A +MF EM   G   N     SVL AC   G
Sbjct: 489 AIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSG 527


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 274/807 (33%), Positives = 419/807 (51%), Gaps = 68/807 (8%)

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE 148
           L S+L+ C +  PSG   G Q H  +L +   ++G++   L+ MY  C    D A+ IF 
Sbjct: 49  LVSILQTCTD--PSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLD-AKNIFY 105

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA--AYS 206
           ++       WN +I  ++  G        + +M   G      P++YTF  +I A    +
Sbjct: 106 QLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCG----TLPDKYTFPYVIKACGGLN 161

Query: 207 SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN----V 262
           SV  G  +  +I  M    G   D++VGS+L+  ++  G  + AR +F++M  K+     
Sbjct: 162 SVALGRVVHDKIQFM----GFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWN 217

Query: 263 VSMNG-------------LMEGRRK------------------------GKEVHGYLIRS 285
           V +NG              ME RR                         G ++HG ++ S
Sbjct: 218 VMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSS 277

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
           GL     V N L+ MYAKCG + D+R +F  M   D V+WN MISG  QNG  +EA   F
Sbjct: 278 GLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLF 337

Query: 346 -----CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
                  M+ D +  S+F  +  LS  A+L     G++IH   ++ G+  DV + +AL+ 
Sbjct: 338 HEMISARMKPDSITFSSF--LPLLSEGATL---RQGKEIHCYIIRNGVSLDVFLKSALID 392

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           +Y     +    K+F      D V   ++I  +     + + A++ +  + +     N V
Sbjct: 393 IYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYV-LNGMNNNALEIFRWLLQERMRANSV 451

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           T  ++L A +  +   LG ++H  ++K        + +A++  Y KCG +D   + F  +
Sbjct: 452 TLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGI 511

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
           S++ D V WNSMI+    N    +A++L   M   G + D  + +  LSACA++  L  G
Sbjct: 512 SDK-DAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYG 570

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
            E+HA  +R     D+   SAL+DMYSKCG +D A R FD M  +N  SWNS+I+ Y  H
Sbjct: 571 KEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNH 630

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
           G    +L LF  M  DG  PDHVTF+ ++SAC HAG VDEG  +F+ M++  G++ ++E 
Sbjct: 631 GRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEH 690

Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
           ++CMVDL GRAG L++    IN MP +P++ +W T+LGAC        EL   A+  LF+
Sbjct: 691 YACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHG--NVELAEVASRNLFD 748

Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           ++PQN+  YVLL+N++A+ G+WE V K R  MKE  V+K  GCSW+ + +  H+FVA D 
Sbjct: 749 LDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADR 808

Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQ 847
           SHP+   IY  LK L  ++R  GYVPQ
Sbjct: 809 SHPQSSQIYLLLKNLFLELRKEGYVPQ 835



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 165/575 (28%), Positives = 268/575 (46%), Gaps = 58/575 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            ++ H +I   GF  DVF+ ++LI  Y   G +  A  LFD MP ++ V W  +++GY  
Sbjct: 166 GRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVK 225

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G  + A  +F EM R     N      VL  C         FG Q+H LV+ S    D 
Sbjct: 226 NGDWDNATGVFMEMRRTETNPNSVTFACVLSVCAS--EIMINFGSQLHGLVVSSGLEMDS 283

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V+N L+AMY  C    D ARR+F+ +   DL++WN +IS Y Q G       LF  M  
Sbjct: 284 PVANTLLAMYAKCGHLFD-ARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEM-- 340

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVGSALVSG 240
                 +KP+  TF S +      +LS    L+Q   I   + + G+  D+++ SAL+  
Sbjct: 341 --ISARMKPDSITFSSFL-----PLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDI 393

Query: 241 FARLGNFYYARKIFEQMIQKNVV---------SMNG-----------LMEGRRK------ 274
           + +  +   ARKIF+Q    ++V          +NG           L++ R +      
Sbjct: 394 YFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTL 453

Query: 275 ---------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                          GKE+HG+++++G      VG+ +++MYAKCG +D +   F  +  
Sbjct: 454 ASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISD 513

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           KD+V WN+MI+   QNG  EEAI  F  M   G      S+ + LS+CA+L  +  G++I
Sbjct: 514 KDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEI 573

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           H   ++    SD+   +AL+ +Y+  G L    +VF  M E ++VSWNS+I A+ +   L
Sbjct: 574 HAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRL 633

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIEN 498
             +++  +  M   G  P+ VTF+ I++A         G H       +  +        
Sbjct: 634 -KDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYA 692

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            ++  +G+ G +++   +   M    D   W +++
Sbjct: 693 CMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLL 727



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 164/361 (45%), Gaps = 47/361 (13%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  I+++G + DVFL + LI++Y +  D+  A K+FD+    + V    ++SGY
Sbjct: 366 RQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGY 425

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              GM+N A ++F+ +++     N   L SVL AC   G +    G ++H  +LK+    
Sbjct: 426 VLNGMNNNALEIFRWLLQERMRANSVTLASVLPAC--AGLAALTLGKELHGHILKNGHGG 483

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V + ++ MY  C    D A + F  I  +D + WNS+I+  SQ G       LF +M
Sbjct: 484 SCYVGSAIMDMYAKC-GRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQM 542

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSV--LSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
              G +Y            I+AA S+   L   +  ++I A + +    SDL+  SAL+ 
Sbjct: 543 GMAGTKYDCVS--------ISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALID 594

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVN 299
            +++ GN   A ++F+ M +KN VS N ++                              
Sbjct: 595 MYSKCGNLDLACRVFDTMEEKNEVSWNSIIAA---------------------------- 626

Query: 300 MYAKCGTIDDSRSVFRFMIG----KDSVSWNTMISGLDQNGCYEEAIMNF-CAMRRDGLM 354
            Y   G + DS ++F  M+G     D V++  +IS     G  +E I  F C     G+M
Sbjct: 627 -YGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIM 685

Query: 355 S 355
           +
Sbjct: 686 A 686


>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
 gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
          Length = 652

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 239/706 (33%), Positives = 395/706 (55%), Gaps = 67/706 (9%)

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
           F RLG    AR+IF+ +  ++  S  G+M                            +++
Sbjct: 2   FGRLGCVERARQIFDAIADRDSFSW-GIM----------------------------LSI 32

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           YA+ G + +++ VF  M      SW  ++S    +G +EEA   F  M+   L++    +
Sbjct: 33  YARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQERDLIAWTI-M 91

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           ++ L++ +++       + H + +    + D+    A+L+  A+ G +    + F  MPE
Sbjct: 92  LTVLATFSNIE----DAKYHFDQMP---ERDLVAWTAMLAANAERGQMENARETFDQMPE 144

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            +  SW S++ A+  S            D++ AG   + +   N++A  +  +    G+ 
Sbjct: 145 RNLFSWTSLLSAYGRSG-----------DVKAAGRVFDSMPEWNLVAWTAMLT----GYS 189

Query: 481 VHAQVIKYNVANETTIE------NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           +   V++   A ++  E       A+LS Y   G +    +IF RM ER D +SW +M++
Sbjct: 190 LSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPER-DLISWATMVA 248

Query: 535 GYIHNELLPKAMNLVWFM-----MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
             + N+LL ++  L   M     + +G   +  TF T+L AC+ +  L  G ++HA    
Sbjct: 249 ALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAE 308

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
              + D+V+ +ALV+ Y +CG +  A   FD M  R+V SW+SMIS +A+ G  D+A+ L
Sbjct: 309 RGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMEL 368

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           + +M  +G LPD + F+ VL ACS++G+V+     F+S+     + P LE ++CMVD+LG
Sbjct: 369 YHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLG 428

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
           RAG+L   E+ +  MP  P  L++ T+L AC        E G  AA ++FE++P+N+  Y
Sbjct: 429 RAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYT--DVERGEAAAEVVFELDPENSSPY 486

Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIY 829
           + LAN+Y++  + +D A+ RK M+E  +KK+ GCSW+ + D VH F+AGD+ HP++D IY
Sbjct: 487 ITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIY 546

Query: 830 EKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIM 888
            +++ L ++M++AGY   TK  L D+E + KE+L+ YHSEK+A+AF +++     P+RI+
Sbjct: 547 AEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLRIV 606

Query: 889 KNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           KNLRVC DCH+A K ISK+ GREI++RD+NRFHHF +G CSC DYW
Sbjct: 607 KNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 155/646 (23%), Positives = 264/646 (40%), Gaps = 133/646 (20%)

Query: 132 MYG--SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR------ 183
           M+G   C+E    AR+IF+ I  RD  SW  ++S+Y++ GD  +   +F RM R      
Sbjct: 1   MFGRLGCVER---ARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSW 57

Query: 184 ----EGFRYSLKPNE---------------YTFGSLITAAYSSVLSGSYLLQQ------- 217
                 F  S    E               +T    + A +S++    Y   Q       
Sbjct: 58  TALLSAFALSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPERDLV 117

Query: 218 ----ILAMVKKAGLLS------------DLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
               +LA   + G +             +L+  ++L+S + R G+   A ++F+ M + N
Sbjct: 118 AWTAMLAANAERGQMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWN 177

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRSG-LFDMVA-----VGNGLVNMYAKCGTIDDSRSVFR 315
           +V+   ++     G  + G ++R+   FD +          +++ YA  G +  +R +F+
Sbjct: 178 LVAWTAML----TGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQ 233

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR-----DGLMSSNFSLISTLSSCASL 370
            M  +D +SW TM++ L +N   EE+   F  M R      G+  +  + I+ L +C+ L
Sbjct: 234 RMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFL 293

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
           G +  G++IH    + G D+D+ VSNAL++ Y   G L     VF  M   D +SW+S+I
Sbjct: 294 GALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMI 353

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
            AFA     V EA++ Y  M   G  P+ + FI++L A S+  + +        ++  + 
Sbjct: 354 SAFA-QRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVG-DT 411

Query: 491 ANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNL 548
             E T+E+   ++   G+ G++ D E +                        L+P     
Sbjct: 412 QVEPTLEHYACMVDVLGRAGKLRDAEDLL----------------------RLMPFHPGP 449

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS---ALVDM 605
           + +M             T+LSAC     +ERG            E D    S    L ++
Sbjct: 450 LLYM-------------TMLSACKLYTDVERG----EAAAEVVFELDPENSSPYITLANI 492

Query: 606 YSKCGRIDYASRFFDLMPVRNVY-----SW-------NSMISGYARHGHGDKALT----L 649
           YS   R   A+R   LM  R +      SW       +  I+G   H   D+       L
Sbjct: 493 YSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAEIQRL 552

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
             QMK  G   D    +  +       L+   + H + ++  +GLI
Sbjct: 553 GRQMKEAGYFQDTKVVLQDVEEDEKENLL---WYHSEKLAIAFGLI 595



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 173/405 (42%), Gaps = 83/405 (20%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D F    ++++Y R GDL++A  +FD MP  +  SW  ++S +   G   EA  +F  M 
Sbjct: 22  DSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQ 81

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFG-MQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
               +     L +VL        + + F  M    LV                AM  +  
Sbjct: 82  ERDLIAWTIML-TVLATFSNIEDAKYHFDQMPERDLV-------------AWTAMLAANA 127

Query: 138 E--STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
           E    + AR  F+++  R+L SW S++S Y + GD  +  ++F  M            E+
Sbjct: 128 ERGQMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMP-----------EW 176

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKA---GLLSDLYVGSALVSGFARLGNFYYARK 252
                   A++++L+G Y L   +   K+A       DL   +A++S +A  G+  Y R+
Sbjct: 177 NL-----VAWTAMLTG-YSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTRE 230

Query: 253 IFEQMIQKNVVSM---------NGLMEGRR------------------------------ 273
           IF++M +++++S          N L+E  +                              
Sbjct: 231 IFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDAC 290

Query: 274 -------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                  +G+++H  +   G    + V N LVN Y +CG + D++ VF  M  +D +SW+
Sbjct: 291 SFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWS 350

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           +MIS   Q G  +EA+  +  M  +G +  +   IS L +C++ G
Sbjct: 351 SMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSG 395



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 36/320 (11%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+     ++      G + +A + FD+MP+RN  SW  ++S Y   G    A ++F  M 
Sbjct: 115 DLVAWTAMLAANAERGQMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMP 174

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA------- 131
                 N  A  ++L             G  +   V+++ + FD +    LIA       
Sbjct: 175 E----WNLVAWTAMLT------------GYSLSGDVVRAKRAFDSMPERDLIAWTAMLSA 218

Query: 132 -MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE-GFRYS 189
             +   L  T   R IF+ +  RDLISW ++++   +        +LF RM R       
Sbjct: 219 YAFNGHLRYT---REIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKG 275

Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
           + PN  TF +L+ A   S L      ++I A V + G  +DL V +ALV+ + R G    
Sbjct: 276 MTPNRVTFITLLDAC--SFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGD 333

Query: 250 ARKIFEQMIQKNVVSMNGLMEG-RRKGK-----EVHGYLIRSGLFDMVAVGNGLVNMYAK 303
           A+ +F+ M +++V+S + ++    ++G+     E++  ++  G      +   ++   + 
Sbjct: 334 AKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSN 393

Query: 304 CGTIDDSRSVFRFMIGKDSV 323
            G ++ S   FR ++G   V
Sbjct: 394 SGVVEASGDFFRSIVGDTQV 413



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 52/98 (53%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H  + + GF  D+ + N L+N Y R G L  A  +FD M  R+ +SW+ ++S + 
Sbjct: 298 EGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFA 357

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            +G  +EA +++  M+  G L +     SVL AC   G
Sbjct: 358 QRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSG 395


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 221/574 (38%), Positives = 331/574 (57%), Gaps = 6/574 (1%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           + +++C     +  G+Q+H   +K      V ++  L+ LY   G L     V   MPE 
Sbjct: 46  AAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPER 105

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           + VSW ++I  ++ S    +EA++ ++ M RAG   N  T   +L +       +   QV
Sbjct: 106 NVVSWTAMISGYSQS-GRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQV 164

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H+ V+K N  +   + ++LL  YGK G + +  K+F  + ER D VS  ++ISGY    L
Sbjct: 165 HSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPER-DTVSCTAIISGYAQLGL 223

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +A++L   +   G + ++ TF T+L++ + +A+L  G +VH   +R  L F +V+ ++
Sbjct: 224 DDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNS 283

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+DMYSKCG++ Y+ R FD MP R+  SWN+M+ GY RHG G + + LF  M  +   PD
Sbjct: 284 LIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMT-EEVKPD 342

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            VT + VLS CSH GLVDEG   F  + +    +  +  + C++DLLGR+G+L K  + I
Sbjct: 343 SVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLI 402

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
             MP  P   IW ++LGA CR +     +G   A  L +MEP NA NYV+L+N+YA+ G 
Sbjct: 403 EHMPFEPTPAIWGSLLGA-CRVHI-NVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGM 460

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           W+DV + RK M E  V KE   SW+ +   +H F + +  HP K  I  K+KE+   ++ 
Sbjct: 461 WKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKA 520

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSA 900
           AG+VP     L D++ E KE ++  HSEK+A+ F L      L I++MKNLR+C DCH+ 
Sbjct: 521 AGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNF 580

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            KF+SK+ GREI LRD NRFH   DG C+CGDYW
Sbjct: 581 AKFVSKVYGREISLRDKNRFHLLKDGACTCGDYW 614



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 190/372 (51%), Gaps = 11/372 (2%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +G++VH +++++     V +   L+ +Y +CG +DD+R+V   M  ++ VSW  MISG  
Sbjct: 59  EGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYS 118

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           Q+G + EA+  F  M R G  ++ F+L + L+SC     I   +Q+H   +K   +S + 
Sbjct: 119 QSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMF 178

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V ++LL +Y  +G +    KVF ++PE D VS  ++I  +A    L  EA+  +  +  +
Sbjct: 179 VGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQL-GLDDEALDLFRQLYSS 237

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G   N VTF  +L + S  +    G QVH  +++  +     ++N+L+  Y KCG++   
Sbjct: 238 GMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYS 297

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            ++F  M + R  +SWN+M+ GY  + +  + + L   M +   + D  T   VLS C+ 
Sbjct: 298 RRVFDNMPQ-RSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VKPDSVTLLAVLSGCSH 355

Query: 574 VATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
              ++ G+++    V+   E + VI       ++D+  + G++  A    + MP     +
Sbjct: 356 GGLVDEGLDIFDLIVK---EQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPA 412

Query: 630 -WNSMISGYARH 640
            W S++     H
Sbjct: 413 IWGSLLGACRVH 424



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 234/490 (47%), Gaps = 56/490 (11%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H  ++K  +   V+L   LI +YVR G L  A  + D MP+RN VSW  ++SGY+
Sbjct: 59  EGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYS 118

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G   EA ++F  M+RAG   N + L +VL +C        +   QVH LV+K+N    
Sbjct: 119 QSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPV--HQSIQQVEQVHSLVVKTNFESH 176

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V + L+ MYG      + AR++F+ +  RD +S  +IIS Y+Q G       LF ++ 
Sbjct: 177 MFVGSSLLDMYGKSGNIQE-ARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLY 235

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             G    ++ N  TF +L+T + S + S +Y  +Q+  ++ +  L   + + ++L+  ++
Sbjct: 236 SSG----MQCNYVTFTTLLT-SLSGLASLNY-GKQVHGLILRKELPFFIVLQNSLIDMYS 289

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---GKEVHGYLIRSGLFDMVAVGNGLVN 299
           + G   Y+R++F+ M Q++ +S N ++ G  +   G+EV   L R+   ++      L+ 
Sbjct: 290 KCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEV-VQLFRTMTEEVKPDSVTLLA 348

Query: 300 MYAKC---GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           + + C   G +D+   +F  ++ +     N +I  +   GC  +       + R G +  
Sbjct: 349 VLSGCSHGGLVDEGLDIFDLIVKEQ----NAVIH-IGHYGCVID------LLGRSGQLQK 397

Query: 357 NFSLISTL---SSCASLGWIMLGQQIH-----GEGLKLGLDSDVSVSNA-----LLSLYA 403
              LI  +    + A  G ++   ++H     GE +   L  D+   NA     L ++YA
Sbjct: 398 ALDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKL-LDMEPGNAGNYVILSNIYA 456

Query: 404 DAGYLSRCLKVFFLMPEHDQV-----SW---NSVIGAFADSEAL------VSEAVK-YYL 448
            AG      +V  LM E+        SW   + VI  F  SE        ++  +K  Y+
Sbjct: 457 AAGMWKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYV 516

Query: 449 DMRRAGWSPN 458
           D++ AG+ P+
Sbjct: 517 DVKAAGFVPD 526



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 13/168 (7%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +   ++AC     L  G +VHA  V+A     V + + L+ +Y +CG +D A    D MP
Sbjct: 44  YDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMP 103

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            RNV SW +MISGY++ G   +AL LF +M   G   +  T   VL++C          +
Sbjct: 104 ERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCP-------VHQ 156

Query: 684 HFKSMSQVYGLIPQL----EQF--SCMVDLLGRAGELDKIEEFINKMP 725
             + + QV+ L+ +       F  S ++D+ G++G + +  +  + +P
Sbjct: 157 SIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLP 204


>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g08820
 gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
 gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
 gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 685

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 220/611 (36%), Positives = 342/611 (55%), Gaps = 5/611 (0%)

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           +N++I+G   N  + E +  F ++R+ GL    F+    L +C       LG  +H   +
Sbjct: 79  YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           K G + DV+   +LLS+Y+ +G L+   K+F  +P+   V+W ++   +  S     EA+
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTS-GRHREAI 197

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
             +  M   G  P+    + +L+A         G  +   + +  +   + +   L++ Y
Sbjct: 198 DLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLY 257

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            KCG+M+    +F  M E+ D V+W++MI GY  N    + + L   M+Q   + D F+ 
Sbjct: 258 AKCGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSI 316

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
              LS+CAS+  L+ G    +   R     ++ + +AL+DMY+KCG +      F  M  
Sbjct: 317 VGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKE 376

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           +++   N+ ISG A++GH   +  +F Q +  G  PD  TF+G+L  C HAGL+ +G + 
Sbjct: 377 KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRF 436

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           F ++S VY L   +E + CMVDL GRAG LD     I  MP+ PN+++W  +L  C    
Sbjct: 437 FNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLV- 495

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
            + T+L       L  +EP NA NYV L+N+Y+ GG+W++ A+ R  M +  +KK  G S
Sbjct: 496 -KDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYS 554

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLV 864
           W+ ++  VH F+A D+SHP  D IY KL++L  +MR  G+VP T+F  FD+E E KE ++
Sbjct: 555 WIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVL 614

Query: 865 SYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
            YHSEK+AVA  +++ +    IR++KNLRVCGDCH   K ISKI  REIV+RD+NRFH F
Sbjct: 615 GYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCF 674

Query: 924 NDGKCSCGDYW 934
            +G CSC DYW
Sbjct: 675 TNGSCSCNDYW 685



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/422 (23%), Positives = 198/422 (46%), Gaps = 16/422 (3%)

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM-----------EGRRKGK 276
             ++++ ++L++GF     F+    +F   I+K+ + ++G               R+ G 
Sbjct: 73  FPNIFLYNSLINGFVNNHLFHETLDLFLS-IRKHGLYLHGFTFPLVLKACTRASSRKLGI 131

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           ++H  +++ G    VA    L+++Y+  G ++D+  +F  +  +  V+W  + SG   +G
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSG 191

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
            + EAI  F  M   G+   ++ ++  LS+C  +G +  G+ I     ++ +  +  V  
Sbjct: 192 RHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRT 251

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
            L++LYA  G + +   VF  M E D V+W+++I  +A S +   E ++ +L M +    
Sbjct: 252 TLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYA-SNSFPKEGIELFLQMLQENLK 310

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P+  + +  L++ +S     LG    + + ++       + NAL+  Y KCG M    ++
Sbjct: 311 PDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEV 370

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F  M E +D V  N+ ISG   N  +  +  +     + G   D  TF  +L  C     
Sbjct: 371 FKEMKE-KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGL 429

Query: 577 LERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMI 634
           ++ G+   +A      L+  V     +VD++ + G +D A R    MP+R N   W +++
Sbjct: 430 IQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALL 489

Query: 635 SG 636
           SG
Sbjct: 490 SG 491



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 176/370 (47%), Gaps = 56/370 (15%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  ++K GF +DV    +L+++Y   G L  A KLFDE+PDR+ V+W  + SGYT  G 
Sbjct: 133 LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGR 192

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKFGMQVHCLVLKSNQTFDGL 124
             EA  +FK+MV  G   + Y +  VL AC   G   SG      +  + ++ N      
Sbjct: 193 HREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS----F 248

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V   L+ +Y  C    + AR +F+ +  +D+++W+++I  Y+         +LF +M +E
Sbjct: 249 VRTTLVNLYAKC-GKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE 307

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
               +LKP++++    +++  S  L    L +  ++++ +   L++L++ +AL+  +A+ 
Sbjct: 308 ----NLKPDQFSIVGFLSSCAS--LGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKC 361

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE--------------------------- 277
           G      ++F++M +K++V MN  + G  K                              
Sbjct: 362 GAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLL 421

Query: 278 ---VHGYLIRSGL--FDMVAVGNGL----------VNMYAKCGTIDDS-RSVFRFMIGKD 321
              VH  LI+ GL  F+ ++    L          V+++ + G +DD+ R +    +  +
Sbjct: 422 CGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPN 481

Query: 322 SVSWNTMISG 331
           ++ W  ++SG
Sbjct: 482 AIVWGALLSG 491



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/471 (22%), Positives = 202/471 (42%), Gaps = 56/471 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H+ ++ H   +D FL N L+   +       +  LF      N   +  +++G+ + 
Sbjct: 30  KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            + +E   +F  + + G  L+ +    VL+AC     S  K G+ +H LV+K     D  
Sbjct: 90  HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRA--SSRKLGIDLHSLVVKCGFNHDVA 147

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
               L+++Y       D A ++F+EI  R +++W ++ S Y+  G       LF +M   
Sbjct: 148 AMTSLLSIYSGSGRLND-AHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEM 206

Query: 185 GFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           G    +KP+ Y    +++A      + SG ++++ +  M     +  + +V + LV+ +A
Sbjct: 207 G----VKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEM----EMQKNSFVRTTLVNLYA 258

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGL----FDMVA 292
           + G    AR +F+ M++K++V+ + +++G       ++G E+   +++  L    F +V 
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVG 318

Query: 293 -------------------------------VGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                                          + N L++MYAKCG +     VF+ M  KD
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKD 378

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IH 380
            V  N  ISGL +NG  + +   F    + G+     + +  L  C   G I  G +  +
Sbjct: 379 IVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN 438

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI 430
                  L   V     ++ L+  AG L    ++   MP   + + W +++
Sbjct: 439 AISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALL 489



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 146/320 (45%), Gaps = 43/320 (13%)

Query: 21  FLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRA 80
           F+  TL+N+Y + G +  A  +FD M +++ V+W+ ++ GY       E  ++F +M++ 
Sbjct: 248 FVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE 307

Query: 81  GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST 140
               +++++   L +C   G      G     L+ +     +  ++N LI MY  C    
Sbjct: 308 NLKPDQFSIVGFLSSCASLG--ALDLGEWGISLIDRHEFLTNLFMANALIDMYAKC---G 362

Query: 141 DCAR--RIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             AR   +F+E++ +D++  N+ IS  ++ G     F +F + ++ G    + P+  TF 
Sbjct: 363 AMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG----ISPDGSTFL 418

Query: 199 SLITAA-----------YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
            L+              + + +S  Y L++    V+  G + DL+  + ++    RL   
Sbjct: 419 GLLCGCVHAGLIQDGLRFFNAISCVYALKRT---VEHYGCMVDLWGRAGMLDDAYRL--- 472

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAV-----GN--GLVNM 300
                I +  ++ N +    L+ G R  K+    L  + L +++A+     GN   L N+
Sbjct: 473 -----ICDMPMRPNAIVWGALLSGCRLVKDTQ--LAETVLKELIALEPWNAGNYVQLSNI 525

Query: 301 YAKCGTIDDSRSVFRFMIGK 320
           Y+  G  D++  V R M+ K
Sbjct: 526 YSVGGRWDEAAEV-RDMMNK 544



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 107/280 (38%), Gaps = 44/280 (15%)

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           T++S   +V  L+   ++H   +   L  D  + + L+       +  Y+   F      
Sbjct: 18  TLISVACTVNHLK---QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFP 74

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-----------H 674
           N++ +NS+I+G+  +    + L LF  ++  G      TF  VL AC+           H
Sbjct: 75  NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134

Query: 675 AGLVDEGFKH----FKSMSQVYGLIPQLEQFSCMVDLL------------------GRAG 712
           + +V  GF H      S+  +Y    +L     + D +                  GR  
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHR 194

Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ-NAVNYVL 771
           E   + + + +M + P+S     VL AC        + G      + EME Q N+     
Sbjct: 195 EAIDLFKKMVEMGVKPDSYFIVQVLSACVHVG--DLDSGEWIVKYMEEMEMQKNSFVRTT 252

Query: 772 LANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
           L N+YA  GK E       +M E ++      +W TM  G
Sbjct: 253 LVNLYAKCGKMEKARSVFDSMVEKDI-----VTWSTMIQG 287


>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
           [Vitis vinifera]
          Length = 807

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 250/753 (33%), Positives = 404/753 (53%), Gaps = 57/753 (7%)

Query: 143 ARRIFEEIETRDLISW-NSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
           ++ +  +I+T   +S+ N++I  Y++ G       ++ +M  +G    +K  E+ +   +
Sbjct: 60  SKPLSTKIQTFVSVSFANNVIREYTEDGFFDDAIGVYLKMLDDG----VKVEEFRYFPCL 115

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
             A+   L   Y  +QI   V K G+L D+ V ++L++ + + G    A ++FE+M + +
Sbjct: 116 IKAFGG-LCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVD 174

Query: 262 VVSMNGLMEGRRK------------------------------------------GKEVH 279
           +VS N ++ G +K                                          G+E+H
Sbjct: 175 LVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIH 234

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQ 334
           G +++SGL     + + L+ MY KCG+I ++ ++F  ++ KDSV      WN MISG   
Sbjct: 235 GVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVS 294

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NGC+ +A++ F  M   G+     +++S  S C+    I  G+QIHG   K GL +++ V
Sbjct: 295 NGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRV 354

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             ALL +Y   G +   LK+F     H+ + W++VI   A S         +Y      G
Sbjct: 355 ETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDG 414

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
            + +G+  + +L A SS ++   G Q+H    K    ++  + +AL+  Y KC +M   +
Sbjct: 415 LADSGI-LVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSK 473

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           K+F R+S++ D VSWN++ISGY  +E   +A+     M     R +  T A +LS CA +
Sbjct: 474 KVFLRLSQK-DLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHL 532

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
           + +    EVH   +R  L   V++ ++L+  Y+KCG I+ +   F+ MP RN  SWNS+I
Sbjct: 533 SVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSII 592

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
            G   H   D+ + LF +M   G  PDHVTF  +LSACSHAG VDEG K+FKSM + + L
Sbjct: 593 LGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNL 652

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
            PQLEQ++CMVDLLGRAG L++  + I  MP TP+  IW ++LG+C   N     L    
Sbjct: 653 KPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSC--KNHGDEILAEIV 710

Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
           AN +F++ P +    VLLAN+Y + GK  + +K R  +K+  +KK+ GCSW+ + +  H+
Sbjct: 711 ANHIFKLVPSSVGYRVLLANLYENLGKGREGSKVRSEIKDMGLKKKPGCSWIEVDNNFHI 770

Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQ 847
           F+AGD SH + D IY  ++ L  +++ AGY+PQ
Sbjct: 771 FIAGDRSHSQSDEIYAAVESLTTEIKRAGYIPQ 803



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 183/647 (28%), Positives = 298/647 (46%), Gaps = 72/647 (11%)

Query: 51  SVSWAC-IVSGYTHKGMSNEACKMFKEMVRAGFLLNRYA-LGSVLRACQECGPSGFKFGM 108
           SVS+A  ++  YT  G  ++A  ++ +M+  G  +  +     +++A    G      G 
Sbjct: 72  SVSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFG--GLCDVYKGR 129

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR 168
           Q+H  VLK     D  V N L+ MY  C    D A ++FE++   DL+SWN++IS + + 
Sbjct: 130 QIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVED-AVQMFEKMPEVDLVSWNTMISGFQKS 188

Query: 169 GDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL-----QQILAMVK 223
            D       F  M  E   + + PN         A  SS+LS S L      ++I  +V 
Sbjct: 189 MDYTRSLMFFRSMVWE---FGIYPNR-------VACVSSILSCSSLQSLTHGREIHGVVV 238

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK-----NVVSMNGLMEGRRK---- 274
           K+GL  + Y+ S+L+  + + G+   A  IF  ++ K     N V  N ++ G       
Sbjct: 239 KSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCF 298

Query: 275 -------------------------------------GKEVHGYLIRSGLFDMVAVGNGL 297
                                                GK++HG + + GL + + V   L
Sbjct: 299 SQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETAL 358

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR-RDGLMSS 356
           ++MY KCG +     +FR     + + W+ +IS   Q+GC  +A+  F   +  DGL  S
Sbjct: 359 LDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADS 418

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
              L++ L +C+SL     G QIHG   K+G  SDV V +AL+ LYA    +    KVF 
Sbjct: 419 GI-LVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFL 477

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            + + D VSWN++I  +A  E    EA+K + DM+     PN VT   IL+  +  S+  
Sbjct: 478 RLSQKDLVSWNALISGYAQDEC-ADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMT 536

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY 536
           L  +VH  +I+  + +   + N+L++ Y KCG+++     F +M ER D VSWNS+I G 
Sbjct: 537 LCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERND-VSWNSIILGM 595

Query: 537 IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC-LEFD 595
             +    + + L   M+  G + DH TF  +LSAC+    ++ G +     V    L+  
Sbjct: 596 GMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQ 655

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMP-VRNVYSWNSMISGYARHG 641
           +   + +VD+  + G ++ A      MP   +   W S++     HG
Sbjct: 656 LEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHG 702



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 153/578 (26%), Positives = 262/578 (45%), Gaps = 58/578 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +  H  +LK G   DV + N+L+ +Y + G +  A ++F++MP+ + VSW  ++SG+  
Sbjct: 128 GRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQK 187

Query: 64  KGMSNEACKMFKEMV-RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                 +   F+ MV   G   NR A  S + +C          G ++H +V+KS    +
Sbjct: 188 SMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSL--QSLTHGREIHGVVVKSGLDVE 245

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLIS-----WNSIISVYSQRGDTISVFKL 177
             + + LI MY  C  S   A  IF  I  +D +      WN +IS Y   G       L
Sbjct: 246 EYLVSSLIEMYMKC-GSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLL 304

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F +M   G    +KP+  T  SL +    S+       +QI  ++ K GL +++ V +AL
Sbjct: 305 FIKMMVWG----IKPDYSTMVSLFSLCSESL--DIAFGKQIHGLIFKFGLKNNIRVETAL 358

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-------------------------- 271
           +  + + G+     KIF +    N++  + ++                            
Sbjct: 359 LDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADS 418

Query: 272 ---------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                          + +G ++HG   + G    V VG+ LV++YAKC  +  S+ VF  
Sbjct: 419 GILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLR 478

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           +  KD VSWN +ISG  Q+ C +EA+  F  M+ + +  +  ++   LS CA L  + L 
Sbjct: 479 LSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLC 538

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +++HG  ++ GL S V VSN+L++ YA  G ++  L  F  MPE + VSWNS+I      
Sbjct: 539 KEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMG-M 597

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETT 495
            +   E +  +  M  +G  P+ VTF  IL+A S       G +    +++ +N+  +  
Sbjct: 598 HSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLE 657

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
               ++   G+ G ++    +   M    D+  W S++
Sbjct: 658 QYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLL 695



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 191/423 (45%), Gaps = 42/423 (9%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  I K G   ++ +   L+++Y++ GD+ +  K+F    + N + W+ ++S    
Sbjct: 336 GKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQ 395

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKFGMQVHCLVLKSNQTF 121
            G   +A ++F E      L +   L +VLRAC      P     GMQ+H L  K     
Sbjct: 396 SGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPE----GMQIHGLATKMGFVS 451

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V + L+ +Y  C      ++++F  +  +DL+SWN++IS Y+Q        K F  M
Sbjct: 452 DVFVGSALVDLYAKC-RDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDM 510

Query: 182 QREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           Q E  R    PN  T   +++  A+ SV++   L +++   + + GL S + V ++L++ 
Sbjct: 511 QLEEIR----PNTVTIACILSVCAHLSVMT---LCKEVHGYLIRQGLGSTVLVSNSLIAT 563

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFD-MVAVG----- 294
           +A+ G+   +   FE+M ++N VS N ++ G          ++   LFD MVA G     
Sbjct: 564 YAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIV---LFDKMVASGIKPDH 620

Query: 295 ---NGLVNMYAKCGTIDDSRSVFRFMIGKDSV-----SWNTMISGLDQNGCYEEA---IM 343
                +++  +  G +D+    F+ M+   ++      +  M+  L + G   +A   IM
Sbjct: 621 VTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIM 680

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
                  D +        S L SC + G  +L + +     KL + S V     L +LY 
Sbjct: 681 AMPCTPDDRIWG------SLLGSCKNHGDEILAEIVANHIFKL-VPSSVGYRVLLANLYE 733

Query: 404 DAG 406
           + G
Sbjct: 734 NLG 736


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/606 (37%), Positives = 337/606 (55%), Gaps = 8/606 (1%)

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           GL    C+   +     M   G  +      + +++C     +  G+Q+H   +      
Sbjct: 16  GLALQRCFVAPLRAASGMALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRP 75

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
            V +   L+++Y   G L     V   MPE   VSW ++I  ++ +E  V EA+  ++ M
Sbjct: 76  AVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHV-EALDLFIKM 134

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
            RAG  PN  T   +L + S       G QVH+ ++K N  +   + ++LL  Y K   +
Sbjct: 135 LRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENI 194

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
            +  ++F  + ER D VS  ++ISGY    L  +A++L   +   G + +H TF T+++A
Sbjct: 195 QEARRVFDTLPER-DVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTA 253

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
            + +A+L+ G +VHA  +R  L F V + ++L+DMYSKCG++ Y+ R FD M  R+V SW
Sbjct: 254 LSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSW 313

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           N+M+ GY RHG G + ++LF  +  +   PD VT + VLS CSH GLVDEG   F ++ +
Sbjct: 314 NAMLMGYGRHGLGHEVISLFKDLHKEVK-PDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK 372

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTE 749
               +     + C++DLLGR+G L+K    I  MP      IW ++LGAC   AN    E
Sbjct: 373 EQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGE 432

Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMK 809
           L    A  L EMEP+NA NYV+L+N+YA+ G W+DV K RK M E  V KE G SW+ + 
Sbjct: 433 L---VAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILD 489

Query: 810 DGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSE 869
             +H F + +  HP K  I  K+KE+   ++ AG+VP     L D++ E KE ++  HSE
Sbjct: 490 KVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSE 549

Query: 870 KIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKC 928
           K+A+ F L      L IR+MKNLR+C DCH+  KF+SK+  REI LRD NRFH    G C
Sbjct: 550 KLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNC 609

Query: 929 SCGDYW 934
           +CGDYW
Sbjct: 610 TCGDYW 615



 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 194/381 (50%), Gaps = 25/381 (6%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +G++VH  +I +     V +G  LV MY +CG +DD+R+V   M  +  VSW TMISG  
Sbjct: 60  EGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYS 119

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           Q   + EA+  F  M R G + + ++L + L+SC+    I  G+Q+H   +K   +S + 
Sbjct: 120 QTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMF 179

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V ++LL +YA +  +    +VF  +PE D VS  ++I  +A  + L  EA+  +  +   
Sbjct: 180 VGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYA-QKGLDEEALDLFRQLYSE 238

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G   N VTF  ++ A S  +    G QVHA +++  +     ++N+L+  Y KCG++   
Sbjct: 239 GMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYS 298

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            ++F  M E R  VSWN+M+ GY  + L  + ++L +  + +  + D  T   VLS C+ 
Sbjct: 299 RRVFDNMLE-RSVVSWNAMLMGYGRHGLGHEVISL-FKDLHKEVKPDSVTLLAVLSGCSH 356

Query: 574 VATLERGMEVHACGVRACLEFDVVIG--SAL---------VDMYSKCGRIDYASRFFDLM 622
              ++ G+++          FD V+   SAL         +D+  + GR++ A    + M
Sbjct: 357 GGLVDEGLDI----------FDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENM 406

Query: 623 PVRNVYS-WNSMISGYARHGH 642
           P  +  S W S++     H +
Sbjct: 407 PFESTPSIWGSLLGACRVHAN 427



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 244/490 (49%), Gaps = 56/490 (11%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H +++   +   VFL   L+ +YVR G L  A  + D MP+R+ VSW  ++SGY+
Sbjct: 60  EGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYS 119

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                 EA  +F +M+RAG + N Y L +VL +C   GP     G QVH L++K+N    
Sbjct: 120 QTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCS--GPQSIYQGKQVHSLLVKTNFESH 177

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V + L+ MY    E+   ARR+F+ +  RD++S  +IIS Y+Q+G       LF ++ 
Sbjct: 178 MFVGSSLLDMYAKS-ENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLY 236

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL---QQILAMVKKAGLLSDLYVGSALVS 239
            EG    ++ N  TF +L+TA     LSG   L   +Q+ A++ +  L   + + ++L+ 
Sbjct: 237 SEG----MQCNHVTFTTLVTA-----LSGLASLDYGKQVHALILRKELPFFVALQNSLID 287

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR-RKG---------KEVHGYLIRSGLFD 289
            +++ G   Y+R++F+ M++++VVS N ++ G  R G         K++H   ++     
Sbjct: 288 MYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVT 346

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT-----MISGLDQNGCYEEAIMN 344
           ++AV +G     +  G +D+   +F  ++ + S   +T     +I  L ++G  E+A+  
Sbjct: 347 LLAVLSGC----SHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNL 402

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYA 403
              M  +   S   SL   L +C     + +G+ +  + L+  ++ + + +  +LS +YA
Sbjct: 403 IENMPFESTPSIWGSL---LGACRVHANVHVGELVAQKLLE--MEPENAGNYVILSNIYA 457

Query: 404 DAGYLSRCLKVFFLM--------PEHDQVSWNSVIGAFADSEAL------VSEAVK-YYL 448
            AG      KV  LM        P    +  + VI  F  SE        ++  +K  ++
Sbjct: 458 AAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFV 517

Query: 449 DMRRAGWSPN 458
           D++ AG+ P+
Sbjct: 518 DIKAAGFVPD 527


>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
 gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
          Length = 592

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/568 (39%), Positives = 335/568 (58%), Gaps = 15/568 (2%)

Query: 376 GQQIHGEGLKLGLDS--DVSVSNALLSLYA-DAGYLSRCLKVFFLMPEH---DQVSWNSV 429
            +QIH   L+ G+ +   +   + L  L A  A  L   + V   +  H   D    N+V
Sbjct: 31  AKQIHARALRAGVPTSHPLLAKHLLFHLAALRAPPLRYAVAVLSRLLPHGPLDPFPLNTV 90

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           +   A S       V   L  RR    P+  T+  ++ A +     + G  +HA+  K  
Sbjct: 91  LRIAAGSP---RPRVALELHRRRLAL-PDTHTYPPLIQACARLLALREGECLHAEAAKNG 146

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSER-RDEVSWNSMISGYIHNELLPKAMNL 548
                 ++N+L+  YG CG  +   K+F  M  R R+ VSWNSM++ +  N    + + +
Sbjct: 147 FVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTV 206

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
            W M+      D FT  +VL+ACA    L  G  VH    +  L  +  + +AL+D+Y+K
Sbjct: 207 FWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAK 266

Query: 609 CGRIDYASRFFDLMPV-RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVG 667
           CG ++ A R F+ M + R V SW S+I G A +G G +AL LFS M+ +  +P  +T VG
Sbjct: 267 CGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVG 326

Query: 668 VLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPIT 727
           VL ACSH GLVD+GF++F  M + YG+ P++E   CMVDLLGRAG +++  ++I  MP+ 
Sbjct: 327 VLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLE 386

Query: 728 PNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
           PN+++WRT+LG+C  A  +K ELG+ A   L E++P ++ +YVLL+N+YA+ G W DV  
Sbjct: 387 PNAVVWRTLLGSC--AMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHV 444

Query: 788 ARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQ 847
            RK M +  V+K  G S V +++ V+ FV GD SHPE + IYE L E+ +++R  GY+P+
Sbjct: 445 LRKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPR 504

Query: 848 TKFALFDLEPESKEDLVSYHSEKIAVAFVLTRN-SKLPIRIMKNLRVCGDCHSAFKFISK 906
           T   L D+E E KE  ++YHSE++A+AF L ++   +PIRI+KNLR+CGDCH AF  ISK
Sbjct: 505 TSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISK 564

Query: 907 IVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +  REI++RD +RFHHF  G CSC DYW
Sbjct: 565 VYDREIIVRDRSRFHHFQGGACSCKDYW 592



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 139/300 (46%), Gaps = 13/300 (4%)

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           RR   +    +    + +CA L  +  G+ +H E  K G  + V V N+L+ LY   G  
Sbjct: 108 RRRLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLF 167

Query: 409 SRCLKVFFLMPEHDQ--VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
               KVF  MP   +  VSWNS++ +FA +    +E +  + +M    ++P+G T +++L
Sbjct: 168 ESAHKVFDEMPVRGRNLVSWNSMLNSFA-ANGRPNEVLTVFWEMLGVDFAPDGFTIVSVL 226

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
            A + F    LG +VH  V K  +   + + NAL+  Y KCG ++D  +IF  M   R  
Sbjct: 227 TACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTV 286

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV--- 583
           VSW S+I G   N    +A+ L   M +        T   VL AC+    ++ G      
Sbjct: 287 VSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDR 346

Query: 584 --HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARH 640
                G+   +E    +G  +VD+  + GR++ A  +   MP+  N   W +++   A H
Sbjct: 347 MKEDYGISPRIEH---LG-CMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMH 402



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 106/205 (51%), Gaps = 10/205 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVS 59
           ++ +  H +  K+GF   VF+ N+L+++Y   G   SA K+FDEMP   RN VSW  +++
Sbjct: 133 REGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLN 192

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
            +   G  NE   +F EM+   F  + + + SVL AC E G      G +VH  V K   
Sbjct: 193 SFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFG--ALALGRRVHVYVEKVGL 250

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIET-RDLISWNSIISVYSQRGDTISVFKLF 178
             +  VSN LI +Y  C    D ARRIFEE+   R ++SW S+I   +  G      +LF
Sbjct: 251 VENSHVSNALIDLYAKCGSVND-ARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELF 309

Query: 179 SRMQREGFRYSLKPNEYTFGSLITA 203
           S M+RE     L P E T   ++ A
Sbjct: 310 SLMERE----KLVPTEITMVGVLYA 330



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 6/274 (2%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI--GKDSVSWNTMIS 330
           R+G+ +H    ++G   +V V N LV++Y  CG  + +  VF  M   G++ VSWN+M++
Sbjct: 133 REGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLN 192

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
               NG   E +  F  M         F+++S L++CA  G + LG+++H    K+GL  
Sbjct: 193 SFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVE 252

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           +  VSNAL+ LYA  G ++   ++F  M      VSW S+I   A +     EA++ +  
Sbjct: 253 NSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLA-ANGFGKEALELFSL 311

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCG 508
           M R    P  +T + +L A S   +   G +   ++ + Y ++        ++   G+ G
Sbjct: 312 MEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAG 371

Query: 509 EMDDCEKIFARMSERRDEVSWNSMI-SGYIHNEL 541
            +++       M    + V W +++ S  +H +L
Sbjct: 372 RVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKL 405



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 31/299 (10%)

Query: 125 VSNVLIAMYGSC--LESTDCARRIFEEIETR--DLISWNSIISVYSQRGDTISVFKLFSR 180
           V N L+ +YG+C   ES   A ++F+E+  R  +L+SWNS+++ ++  G    V  +F  
Sbjct: 153 VQNSLVHLYGACGLFES---AHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWE 209

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M    F     P+ +T  S++TA   +      L +++   V+K GL+ + +V +AL+  
Sbjct: 210 MLGVDF----APDGFTIVSVLTAC--AEFGALALGRRVHVYVEKVGLVENSHVSNALIDL 263

Query: 241 FARLGNFYYARKIFEQM-IQKNVVSMNGLMEGR------RKGKEVHGYLIRSGLFDMVAV 293
           +A+ G+   AR+IFE+M + + VVS   L+ G       ++  E+   + R  L      
Sbjct: 264 YAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEIT 323

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNFCAM 348
             G++   + CG +DD    F  M     +S        M+  L + G  EEA      M
Sbjct: 324 MVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITM 383

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAG 406
               L  +     + L SCA    + LG ++  E L + LD   S    LLS LYA  G
Sbjct: 384 ---PLEPNAVVWRTLLGSCAMHKKLELG-KVAWERL-VELDPGHSGDYVLLSNLYAAVG 437



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 3/102 (2%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP-DRNSVSWACIVSGYTHKGM 66
           H+ + K G   +  + N LI++Y + G +  A ++F+EM   R  VSW  ++ G    G 
Sbjct: 242 HVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGF 301

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKF 106
             EA ++F  M R   +     +  VL AC  CG    GF++
Sbjct: 302 GKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRY 343


>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 684

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 234/665 (35%), Positives = 372/665 (55%), Gaps = 44/665 (6%)

Query: 308 DDSRSVFRF--MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
           D  R+++ F  +   D  +W  +ISG  Q+G  ++AI  +  +    +    F L+S   
Sbjct: 26  DLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAK 85

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           +CA+ G +++ ++IH + ++ G + D+ + NAL+ ++    +++    VF  M   D VS
Sbjct: 86  ACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVS 145

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           W S+   + +   +  + +  + +M   G   N +T  +IL A + +   KLG +VH  +
Sbjct: 146 WTSMTYCYVNC-GMCRQGILLFREMGLNGIRANSLTVSSILPACADYI--KLGREVHGFI 202

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
           ++  +     + +AL++ Y     +     +F  M  R D VSWN M++ Y  N+   + 
Sbjct: 203 LRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHR-DIVSWNVMLTAYFLNKEYERG 261

Query: 546 MNLVWFM-------------------MQRGQ----------------RLDHFTFATVLSA 570
           + L   M                   MQ GQ                + +  T  + L  
Sbjct: 262 LGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPG 321

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
           C ++ +L  G E+H    R     DV I +ALV +Y+KCG ++ +   F+ MP ++V +W
Sbjct: 322 CTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAW 381

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           N+MI   + HG G ++L LF++M   G  P+ VTF+GVLS CSH+ L DEG   F SMS 
Sbjct: 382 NTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSS 441

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
            + + P  + +SCMVD+L RAG L++  +FI KMPI P +  W  +LGAC     +  EL
Sbjct: 442 EHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGAC--RVYKNVEL 499

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
           G  AA+ LFE+EP NA NYVLL+N+  +  KW + ++ RK M++  + K  G SWV +K+
Sbjct: 500 GTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKN 559

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
            V+ FV GD+S+ +KD+IY  L E+++KMR  GY P T F L +++ E +E+ +  HSE+
Sbjct: 560 KVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLCSHSER 619

Query: 871 IAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +AVAF +L  + K  +R+ KNLR+CGDCH+A K I+KIVG +I++RDS RFHHF DG C+
Sbjct: 620 LAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHHFRDGYCT 679

Query: 930 CGDYW 934
           C D+W
Sbjct: 680 CNDFW 684



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 188/426 (44%), Gaps = 85/426 (19%)

Query: 130 IAMYGSCLESTDCARRI--FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
           I +  +CL S D  R +  F++I   DL +W  +IS ++Q G       ++S +      
Sbjct: 15  IKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTL----LS 70

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLL-QQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
            +++P+++    L++ A +   SG  ++ ++I     + G   DL +G+AL+  F +   
Sbjct: 71  RNVRPDKFV---LLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKF 127

Query: 247 FYYARKIFEQMIQKNVVS-------------------------MNGLMEGR--------- 272
              AR +F+ M+ K+VVS                         +NG+             
Sbjct: 128 VNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPA 187

Query: 273 -----RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
                + G+EVHG+++R+ +   V V + LVNMYA    +  +R VF  M  +D VSWN 
Sbjct: 188 CADYIKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNV 247

Query: 328 M-----------------------------------ISGLDQNGCYEEAIMNFCAMRRDG 352
           M                                   ISG  QNG +E A+   C M+  G
Sbjct: 248 MLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSG 307

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
           +  +  +++S L  C +L  +  G++IHG   +     DV+++ AL+ LYA  G L    
Sbjct: 308 IKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSR 367

Query: 413 KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
            VF  MP  D V+WN++I A +       E++  +  M  +G  PN VTFI +L+  S  
Sbjct: 368 HVFNTMPRKDVVAWNTMIMANS-MHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHS 426

Query: 473 SMGKLG 478
            +   G
Sbjct: 427 QLADEG 432



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 132/279 (47%), Gaps = 4/279 (1%)

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+    ++G L R L +F  +PE D  +W  +I           +A+  Y  +      P
Sbjct: 17  LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHT-QHGFPKKAIDIYSTLLSRNVRP 75

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           +    +++  A ++     +  ++H   I++    +  + NAL+  +GKC  ++    +F
Sbjct: 76  DKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVF 135

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
             M  + D VSW SM   Y++  +  + + L   M   G R +  T +++L ACA    L
Sbjct: 136 DDMVVK-DVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADYIKL 194

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
             G EVH   +R  +E +V + SALV+MY+    +  A   FD M  R++ SWN M++ Y
Sbjct: 195 --GREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAY 252

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
             +   ++ L LF QM+ +G   +  ++   +S C   G
Sbjct: 253 FLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNG 291



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 169/381 (44%), Gaps = 51/381 (13%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H   ++ GF  D+ L N LI+++ +   +  A  +FD+M  ++ VSW  +   Y +
Sbjct: 96  AKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVN 155

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            GM  +   +F+EM   G   N   + S+L AC +      K G +VH  +L++    + 
Sbjct: 156 CGMCRQGILLFREMGLNGIRANSLTVSSILPACADY----IKLGREVHGFILRNEMEGNV 211

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            VS+ L+ MY S L     AR +F+ +  RD++SWN +++ Y    +      LF +M++
Sbjct: 212 YVSSALVNMYASSL-GLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRK 270

Query: 184 EGFRYS-------------------------------LKPNEYTFGSLITAAYS-SVLSG 211
           EG + +                               +KPN  T  S +    +   L G
Sbjct: 271 EGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRG 330

Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL-ME 270
               ++I   V +   + D+ + +ALV  +A+ G+   +R +F  M +K+VV+ N + M 
Sbjct: 331 G---KEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMA 387

Query: 271 GRRKGKEVHGYLIRSGLFDMVAVGN-----GLVNMYAKCGTIDDSRSVFRFM-----IGK 320
               GK     ++ + + D     N     G+++  +     D+   VF  M     I  
Sbjct: 388 NSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITP 447

Query: 321 DSVSWNTMISGLDQNGCYEEA 341
           D+  ++ M+  L + G  EEA
Sbjct: 448 DADHYSCMVDVLSRAGRLEEA 468



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 46/95 (48%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  + +H F  DV +   L+ +Y + GDL  +  +F+ MP ++ V+W  ++   
Sbjct: 329 RGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMAN 388

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRAC 96
           +  G   E+  +F +M+ +G   N      VL  C
Sbjct: 389 SMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGC 423



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 4/136 (2%)

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
           G +  A   FD +P  ++ +W  +ISG+ +HG   KA+ ++S +      PD    + V 
Sbjct: 25  GDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVA 84

Query: 670 SACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPN 729
            AC+ +G +    K      Q +G    L   + ++D+ G+   ++      + M +  +
Sbjct: 85  KACAASGDLVVAKKIHDDAIQ-FGFNKDLVLGNALIDMFGKCKFVNGARCVFDDM-VVKD 142

Query: 730 SLIWRTVLGACCRANC 745
            + W ++    C  NC
Sbjct: 143 VVSWTSM--TYCYVNC 156


>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
 gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 238/617 (38%), Positives = 329/617 (53%), Gaps = 71/617 (11%)

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA---DSEA----- 438
           G+  D  V+++LL  Y   G  +    V   MP    V W+++I A A   D+E      
Sbjct: 50  GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109

Query: 439 -----------------LVS---------EAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
                            LVS         +AV   + M   G+ P+       L+A    
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDV 169

Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF--------------- 517
               +G Q+H  V+K     +  +  AL+  YGKCG  D+  ++F               
Sbjct: 170 GDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALV 229

Query: 518 ------ARMSE-------------RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
                 A++SE               + VSW S+++  + N    +A++L   M   G  
Sbjct: 230 AGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIE 289

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
            +  T   VL A A++A L  G   H   +R     D+ +GSALVDMY+KCGR+  A   
Sbjct: 290 PNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMI 349

Query: 619 FDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLV 678
           F+ MP RNV SWN+MI GYA HG  + A+ LF  M+     PD VTF  VL ACS AG  
Sbjct: 350 FEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWT 409

Query: 679 DEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
           +EG  +F  M   +G+ P++E ++CMV LLGRAG+LD   + IN+MP  P+  IW ++LG
Sbjct: 410 EEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLG 469

Query: 739 ACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVK 798
           + CR +     L   AA  LF++EP+NA NYVLL+N+YAS   W+ V + R  MK   +K
Sbjct: 470 S-CRVH-GNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLK 527

Query: 799 KEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPE 858
           KE GCSW+ +K+ VH+ +AGD SHP    I EKLK L  +MR  G+ P T + L D+E +
Sbjct: 528 KEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQ 587

Query: 859 SKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDS 917
            K+D++S HSEK+AVA  L   S   P++++KNLR+CGDCH A KFIS    REI +RD+
Sbjct: 588 EKDDILSVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDT 647

Query: 918 NRFHHFNDGKCSCGDYW 934
           NRFHHF DGKCSC DYW
Sbjct: 648 NRFHHFKDGKCSCADYW 664



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 184/456 (40%), Gaps = 73/456 (16%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR------------------------- 49
           G + D F+ ++L++ Y+R G  A A  + D MP R                         
Sbjct: 50  GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109

Query: 50  ----------NSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQEC 99
                     N ++W  +VSG    G + +A      M   GFL +   +   L A  + 
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDV 169

Query: 100 GPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWN 159
           G      G Q+H  V+K+    D  V+  LI MYG C  + +  R +F+E    D+ S N
Sbjct: 170 GD--VAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVR-VFDESSHMDVASCN 226

Query: 160 SIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ-QI 218
           ++++  S+        +LF    RE     ++ N  ++ S++      V +G  L    +
Sbjct: 227 ALVAGLSRNAQVSEALRLF----REFVGRGIELNVVSWTSIVACC---VQNGRDLEAVDL 279

Query: 219 LAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEV 278
              ++  G+  +      ++  FA +                       LM GR      
Sbjct: 280 FREMQSEGIEPNSVTIPCVLPAFANIA---------------------ALMHGR----SA 314

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H + +R G    + VG+ LV+MYAKCG + D+R +F  M  ++ VSWN MI G   +G  
Sbjct: 315 HCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEA 374

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE-GLKLGLDSDVSVSNA 397
           E A+  F +M+         +    L +C+  GW   G+    E   K G+   +     
Sbjct: 375 ENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYAC 434

Query: 398 LLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           +++L   AG L     +   MP E D   W S++G+
Sbjct: 435 MVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGS 470



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 104/450 (23%), Positives = 197/450 (43%), Gaps = 73/450 (16%)

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V++ L+  Y     + D AR + + +  R ++ W+++I+ ++  GD    + L  RM
Sbjct: 54  DAFVASSLLHAYLRFGATAD-ARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERM 112

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVK--KAGLLSDLYVGSALVS 239
           + +G    ++PN  T+  L++    S          +LA+V+    G L D    S  +S
Sbjct: 113 RSDG----VEPNVITWNGLVSGLNRS----GRARDAVLALVRMHGEGFLPDATGVSCALS 164

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVN 299
               +G+                            G+++HGY++++G      V   L++
Sbjct: 165 AVGDVGDVAV-------------------------GEQLHGYVVKAGCRLDACVATALID 199

Query: 300 MYAKCGTIDD-----------------------SRS--------VFRFMIGK----DSVS 324
           MY KCG  D+                       SR+        +FR  +G+    + VS
Sbjct: 200 MYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVS 259

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W ++++   QNG   EA+  F  M+ +G+  ++ ++   L + A++  +M G+  H   L
Sbjct: 260 WTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSL 319

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           + G   D+ V +AL+ +YA  G +     +F  MP  + VSWN++IG +A        AV
Sbjct: 320 RKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYA-MHGEAENAV 378

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSC 503
           + +  M+ +   P+ VTF  +L A S     + G     ++  K+ ++        +++ 
Sbjct: 379 RLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTL 438

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            G+ G++DD   I  +M    D   W S++
Sbjct: 439 LGRAGKLDDAYDIINQMPFEPDGCIWGSLL 468



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 114/287 (39%), Gaps = 45/287 (15%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  ++K G   D  +   LI++Y + G      ++FDE    +  S   +V+G +    
Sbjct: 178 LHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQ 237

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGP------------------------- 101
            +EA ++F+E V  G  LN  +  S++  C + G                          
Sbjct: 238 VSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPC 297

Query: 102 --------SGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
                   +    G   HC  L+     D  V + L+ MY  C    D AR IFE +  R
Sbjct: 298 VLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRD-ARMIFEAMPYR 356

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG-- 211
           +++SWN++I  Y+  G+  +  +LF  MQ        KP+  TF  ++ A   +  +   
Sbjct: 357 NVVSWNAMIGGYAMHGEAENAVRLFRSMQSS----KEKPDLVTFTCVLGACSQAGWTEEG 412

Query: 212 -SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            SY  +    M  K G+   +   + +V+   R G    A  I  QM
Sbjct: 413 RSYFNE----MQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQM 455


>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 221/540 (40%), Positives = 318/540 (58%), Gaps = 34/540 (6%)

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           WNS + A A+ ++ + +A+  +  +R+    P+  T  ++L A  +      G  +H  V
Sbjct: 96  WNSCLKALAEGDSPI-DAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVV 154

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER---------------------- 523
            K    +   ++N ++  Y  CGEM +   +F +M +R                      
Sbjct: 155 EKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAY 214

Query: 524 --------RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
                   R+  SW SMI+GY+      +A++L   M + G + +  T   VL+ACA + 
Sbjct: 215 DLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLG 274

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            L+ GM +H    R   + +V I + L+DMY KCG ++ A + F+ M  R V SW++MI 
Sbjct: 275 ALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIG 334

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
           G A HG  ++AL LFS M   G  P+ VTF+G+L ACSH GL+ EG + F SM++ YG+I
Sbjct: 335 GLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGII 394

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           PQ+E + CMVDLL RAG L +  EFI  MP+ PN ++W  +LGA CR + +  E+  +A 
Sbjct: 395 PQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGA-CRVH-KNVEMAEEAI 452

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
             L E++P N   YV+L+N+YA  G+WED A+ RK MK+ +VKK  G S +T+   VH F
Sbjct: 453 KHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEF 512

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
           VAG+ESHP+ + I+++ +EL ++MR  GYVP T   L D+E   K   VS HSEK+A+ F
Sbjct: 513 VAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVF 572

Query: 876 -VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            ++   ++ PIRIMKNLR+C DCHSAFK IS IV REIV+RD NRFH FND  CSC DYW
Sbjct: 573 GLMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 113/478 (23%), Positives = 200/478 (41%), Gaps = 106/478 (22%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL-- 332
           G+ +HG + + G    + + N +V++YA CG + ++R +F  M  +D V+WN MI+ L  
Sbjct: 147 GRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIK 206

Query: 333 --DQNGCYE---------------------------EAIMNFCAMRRDGLMSSNFSLIST 363
             D  G Y+                           EAI  F  M   G+  +  ++++ 
Sbjct: 207 QGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAV 266

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L++CA LG + LG +IH    + G   +V +SN L+ +Y   G L    KVF  M E   
Sbjct: 267 LAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTV 326

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSW+++IG  A       EA++ + DM + G  PNGVTFI +L A S   +   G +  A
Sbjct: 327 VSWSAMIGGLA-MHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFA 385

Query: 484 QVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
            + + Y +  +      ++    + G + +  +    M  + + V W ++          
Sbjct: 386 SMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGAL---------- 435

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS-- 600
                                    L AC     + + +E+    ++  LE D +     
Sbjct: 436 -------------------------LGAC----RVHKNVEMAEEAIKHLLELDPLNDGYY 466

Query: 601 -ALVDMYSKCGRIDYASRFFDLMPVRNVYS---WNSM---------ISGYARHGHGDKAL 647
             L ++Y++ GR +  +R    M  R V     W+S+         ++G   H   ++  
Sbjct: 467 VVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIF 526

Query: 648 T----LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK------HFKSMSQVYGLI 695
                L  +M+L G +P+  T V +L        ++EG K      H + ++ V+GL+
Sbjct: 527 QRWEELLEEMRLKGYVPN--TSVVLLD-------IEEGEKVKFVSRHSEKLALVFGLM 575



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 160/376 (42%), Gaps = 39/376 (10%)

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           ++  WN+ +  L +     +AIM F  +R+  +    F+  S L +C +L  +  G+ +H
Sbjct: 92  ETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILH 151

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF---ADSE 437
           G   K+G  S++ + N ++ LYA  G +     +F  MP+ D V+WN +I       D E
Sbjct: 152 GVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHE 211

Query: 438 AL---------------------------VSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
                                          EA+  +  M  AG   N VT + +LAA +
Sbjct: 212 GAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACA 271

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
                 LG ++H    ++       I N L+  Y KCG +++  K+F  M E R  VSW+
Sbjct: 272 DLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEE-RTVVSWS 330

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           +MI G   +    +A+ L   M Q G   +  TF  +L AC+ +  +  G    A   R 
Sbjct: 331 AMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTR- 389

Query: 591 CLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDK 645
             ++ ++        +VD+ S+ G +  A  F   MP++ N   W +++     H + + 
Sbjct: 390 --DYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEM 447

Query: 646 ALTLFSQMKLDGPLPD 661
           A      +    PL D
Sbjct: 448 AEEAIKHLLELDPLND 463



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 125/547 (22%), Positives = 224/547 (40%), Gaps = 55/547 (10%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD--EMPDRNSVSWACIVSG 60
           + +  H QI+K      +     +  V         A ++F   E     +  W   +  
Sbjct: 43  ELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKA 102

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
                   +A  +F  + +     + +   SVLRAC          G  +H +V K    
Sbjct: 103 LAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNL--LDLSNGRILHGVVEKVGFR 160

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            +  + N+++ +Y SC E  + AR +FE++  RD+++WN +I+   ++GD    + LFSR
Sbjct: 161 SNLYLQNMIVHLYASCGEMGE-ARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSR 219

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           M     R        ++ S+I A Y         +  + A +++AG+  +     A+++ 
Sbjct: 220 MPERNVR--------SWTSMI-AGYVQCGKAKEAI-HLFAKMEEAGVKCNEVTVVAVLAA 269

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
            A LG      +I                         H Y  R G    V + N L++M
Sbjct: 270 CADLGALDLGMRI-------------------------HEYSNRHGFKRNVRISNTLIDM 304

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           Y KCG ++++  VF  M  +  VSW+ MI GL  +G  EEA+  F  M + G+  +  + 
Sbjct: 305 YVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTF 364

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           I  L +C+ +G I  G++      +  G+   +     ++ L + AG L    +    MP
Sbjct: 365 IGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMP 424

Query: 420 -EHDQVSWNSVIGA--FADSEALVSEAVKYYLDMRRAGWSPNG--VTFINILAAASSFSM 474
            + + V W +++GA     +  +  EA+K+ L++       +G  V   NI A A  +  
Sbjct: 425 MKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLN---DGYYVVLSNIYAEAGRWED 481

Query: 475 GKLGHQV--HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
                +     QV K    +  T++  +           D E+IF R  E  +E+     
Sbjct: 482 TARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMR---- 537

Query: 533 ISGYIHN 539
           + GY+ N
Sbjct: 538 LKGYVPN 544



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 35/270 (12%)

Query: 480 QVHAQVIKYNVA-NETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV-SWNSMISGYI 537
           QVHAQ+IK N   +   +    L C          ++IF  + +++ E   WNS +    
Sbjct: 46  QVHAQIIKTNAPLSILPLTRVGLVC-AFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALA 104

Query: 538 HNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
             +    A+ L + + Q     D FT ++VL AC ++  L  G  +H    +     ++ 
Sbjct: 105 EGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLY 164

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN-------------------------- 631
           + + +V +Y+ CG +  A   F+ MP R+V +WN                          
Sbjct: 165 LQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERN 224

Query: 632 -----SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
                SMI+GY + G   +A+ LF++M+  G   + VT V VL+AC+  G +D G +   
Sbjct: 225 VRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMR-IH 283

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
             S  +G    +   + ++D+  + G L++
Sbjct: 284 EYSNRHGFKRNVRISNTLIDMYVKCGCLEE 313


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/659 (35%), Positives = 365/659 (55%), Gaps = 6/659 (0%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           +V+  LI SGL     +    +N     G ++ +   FR +   D + WN +I G  Q  
Sbjct: 5   QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 64

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
             +  I  +  M+   +  + F+ +  L +C       +G+QIHG+  K G  S+V V N
Sbjct: 65  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQN 124

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           +L+S+YA  G +S    VF  + +   VSW S+I  +  +   + EA+  + +MR+    
Sbjct: 125 SLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPM-EALNVFKEMRQCNVK 183

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P+ +  ++++ A ++      G  +H  V K  +  E  I  +L + Y K G ++     
Sbjct: 184 PDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFF 243

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F RM E+ + + WN+MISGY +N    +A+ L   M+ +  R+D  T  + + A A V +
Sbjct: 244 FNRM-EKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGS 302

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           LE    +     ++    D  + + L+DMY+KCG I  A   FD +  ++V  W+ MI G
Sbjct: 303 LELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMG 362

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           Y  HGHG +A+ L+++MK  G  P+  TF+G+L+AC ++GLV EG++ F  M   +G+ P
Sbjct: 363 YGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPD-HGIEP 421

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAAN 756
             + +SC+VDLLGRAG L++  +FI  MPI P   +W  +L AC     RK  LG  AA 
Sbjct: 422 HHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSAC--KIHRKVRLGEIAAE 479

Query: 757 MLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV 816
            LF ++P N  +YV L+N+YAS   W  VA  R  M +  + K+ G S + +   +  F 
Sbjct: 480 QLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQ 539

Query: 817 AGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF- 875
            GD SHP+   I+E+L  L ++++ AGYVP  +  L DL  E  E+ + +HSE++AVA+ 
Sbjct: 540 VGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYG 599

Query: 876 VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +++      +RI KNLR C +CHSA K ISK+V REI++RD+ RFHHF DG CSCGD+W
Sbjct: 600 IISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 218/466 (46%), Gaps = 49/466 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           ++Q++  G     FL    IN  +  GD+  A K F E+ + + + W  I+ GYT K + 
Sbjct: 7   YVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIV 66

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           +   +M+ +M  +    N +    VL+AC   G S    G Q+H    K     +  V N
Sbjct: 67  DAPIRMYMDMQISQVHPNCFTFLYVLKACG--GTSVEGIGKQIHGQTFKYGFGSNVFVQN 124

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L++MY         AR +F+++  R ++SW SIIS Y Q GD +    +F  M+    +
Sbjct: 125 SLVSMYAK-FGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMR----Q 179

Query: 188 YSLKPNEYTFGSLITAAYSSV--------LSG----------SYLLQQILAMVKKAGLL- 228
            ++KP+     S++T AY++V        + G            ++  +  M  K GL+ 
Sbjct: 180 CNVKPDWIALVSVMT-AYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVE 238

Query: 229 -----------SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV----VSMNGLMEGRR 273
                       +L + +A++SG+A  G    A K+F +MI KN+    ++M   +    
Sbjct: 239 VARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASA 298

Query: 274 K------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
           +       + + GY+ +S   D   V  GL++MYAKCG+I  +R VF  +  KD V W+ 
Sbjct: 299 QVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSV 358

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           MI G   +G  +EAI  +  M++ G+  ++ + I  L++C + G +  G ++       G
Sbjct: 359 MIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHG 418

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
           ++      + ++ L   AGYL++       MP    VS W +++ A
Sbjct: 419 IEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSA 464



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 201/453 (44%), Gaps = 54/453 (11%)

Query: 128 VLIAMYGSCLESTDC--ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           ++I    +CL   D   A + F E+   D++ WN+II  Y+Q+    +  +++  MQ   
Sbjct: 21  LMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQIS- 79

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
               + PN +TF  ++ A   + + G  + +QI     K G  S+++V ++LVS +A+ G
Sbjct: 80  ---QVHPNCFTFLYVLKACGGTSVEG--IGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFG 134

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEG-----------------RR--------------- 273
              YAR +F+++  + VVS   ++ G                 R+               
Sbjct: 135 QISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMT 194

Query: 274 ---------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                    +GK +HG + + GL     +   L  MYAK G ++ +R  F  M   + + 
Sbjct: 195 AYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLIL 254

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           WN MISG   NG  EEAI  F  M    +   + ++ S + + A +G + L + + G   
Sbjct: 255 WNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYIS 314

Query: 385 KLGLDSDVSVSNALLSLYADAG--YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
           K     D  V+  L+ +YA  G  YL+RC  VF  + + D V W+ +I  +        E
Sbjct: 315 KSEYRDDTFVNTGLIDMYAKCGSIYLARC--VFDRVADKDVVLWSVMIMGYG-LHGHGQE 371

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           A+  Y +M++AG  PN  TFI +L A  +  + K G ++   +  + +       + ++ 
Sbjct: 372 AICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVD 431

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             G+ G ++        M  +     W +++S 
Sbjct: 432 LLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSA 464



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 181/367 (49%), Gaps = 3/367 (0%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK++HG   + G    V V N LV+MYAK G I  +R VF  +  +  VSW ++ISG  Q
Sbjct: 104 GKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQ 163

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG   EA+  F  MR+  +     +L+S +++  ++  +  G+ IHG   KLGL+ +  +
Sbjct: 164 NGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDI 223

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             +L ++YA  G +      F  M + + + WN++I  +A++     EA+K + +M    
Sbjct: 224 VISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANN-GYGEEAIKLFREMITKN 282

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
              + +T  + + A++     +L   +   + K    ++T +   L+  Y KCG +    
Sbjct: 283 IRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLAR 342

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
            +F R+++ +D V W+ MI GY  +    +A+ L   M Q G   +  TF  +L+AC + 
Sbjct: 343 CVFDRVAD-KDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNS 401

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSM 633
             ++ G E+        +E      S +VD+  + G ++ A  F   MP++  V  W ++
Sbjct: 402 GLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGAL 461

Query: 634 ISGYARH 640
           +S    H
Sbjct: 462 LSACKIH 468


>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 269/821 (32%), Positives = 417/821 (50%), Gaps = 96/821 (11%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G Q H  ++ +       V+N LI MY  C    + A ++F+ +  RD +SWN+++  Y+
Sbjct: 61  GKQAHARMILTEFKPTVFVTNCLIQMYIKC-SDLEFAFKVFDGMPQRDTVSWNAMLFGYA 119

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
            RGD     KLF  M     R  +  N    G L    +  V+                 
Sbjct: 120 GRGDIGVAQKLFDAMPE---RDVVSWNSLISGYLHNGDHRKVI----------------- 159

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSG 286
              D+++         R+G       +F++     V+     +E    G ++HG  ++ G
Sbjct: 160 ---DVFLQ------MGRMGT------VFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMG 204

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
               V  G+ L++MYAKC  +D S   F  M  K+ VSW+ +I+G  QN      +  F 
Sbjct: 205 FDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFK 264

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
            M++ G+  S  +  S   SCA L  + LG Q+HG  LK    +DV +  A L +Y    
Sbjct: 265 EMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCN 324

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADS-------EALVSEA------VKYYLD-MRR 452
            LS   K+F  +P H+  S+N++I  +A S       E  +S A      +K  L+ ++ 
Sbjct: 325 NLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQV 384

Query: 453 AGWSPNGVTFINILAAASSFSM-GKLG--------------------------HQ----- 480
            G S   +   NI  A +   M GK G                          H+     
Sbjct: 385 HGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNE 444

Query: 481 -------VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
                  +H ++IK  +  ++ +  AL+  Y KCG M+  EK+  R++E+   VSWN++I
Sbjct: 445 EKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQT-VVSWNAII 503

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
           SG+   +   +A      M++ G   D+FT+AT+L  CA++ T+E G ++HA  ++  L+
Sbjct: 504 SGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQ 563

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
            D  I S LVDMYSKCG +      F+  P R+  +WN+M+ GYA+HG G++AL +F  M
Sbjct: 564 SDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYM 623

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGE 713
           +L+   P+H TF+ VL AC H GLV++G  +F SM   YGL PQLE +SC+VD++GR+G+
Sbjct: 624 QLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQ 683

Query: 714 LDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLL 772
           + K  E I  MP   +++IWRT+L  C    N    E+  KAA  + ++EP+++  YVLL
Sbjct: 684 VSKALELIEGMPFEADAVIWRTLLSICKIHGN---VEVAEKAAYSILQLEPEDSAAYVLL 740

Query: 773 ANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKL 832
           +N+YA+ G W +V K RK M+   +KKE GCSW+ +K  VH F+ GD++HP    IYE L
Sbjct: 741 SNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENL 800

Query: 833 KELNQKMRDAGYVPQTKFALFDLEPESKED--LVSYHSEKI 871
             L  +M+  GY+P T F L D E  S ++  L+ Y +E +
Sbjct: 801 DVLTDEMKWVGYMPDTDFILNDDELRSLQNQILICYVNEVV 841



 Score =  264 bits (675), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 192/702 (27%), Positives = 330/702 (47%), Gaps = 80/702 (11%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D    N ++  Y   GD+  A KLFD MP+R+ VSW  ++SGY H G   +   +F +M 
Sbjct: 107 DTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMG 166

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           R G + +R     VL++C      G   G+Q+H L +K     D +  + L+ MY  C +
Sbjct: 167 RMGTVFDRTTFAVVLKSCSSLEDHG--GGIQIHGLAVKMGFDCDVVTGSALLDMYAKC-K 223

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             DC+ + F  +  ++ +SW++II+   Q  D     +LF  MQ+ G   S    + TF 
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVS----QSTFA 279

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           S+  +     LS   L  Q+     K    +D+ +G+A +  + +  N   A+K+F  + 
Sbjct: 280 SVFRSCAG--LSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLP 337

Query: 259 QKNVVSMNGL---------------------------MEGRRKGKEVHGYLIRSGLFDMV 291
             N+ S N +                           ++G  +G +VHG  ++S     +
Sbjct: 338 NHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNI 397

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
            V N +++MY KCG + ++  VF  M+ +D+VSWN +I+  +QNG  E+ +  F      
Sbjct: 398 CVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF------ 451

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK--LGLDSDVSVSNALLSLYADAGYLS 409
                                      IH   +K  LGLDS V +  AL+ +Y+  G + 
Sbjct: 452 ---------------------------IHNRIIKSRLGLDSFVGI--ALIDMYSKCGMME 482

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
           +  K+   + E   VSWN++I  F+  +    EA K +  M   G  P+  T+  IL   
Sbjct: 483 KAEKLHDRLAEQTVVSWNAIISGFS-LQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTC 541

Query: 470 SSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
           ++    +LG Q+HAQ+IK  + ++  I + L+  Y KCG M D + IF + +  RD V+W
Sbjct: 542 ANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEK-APNRDFVTW 600

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-VHACGV 588
           N+M+ GY  + L  +A+ +  +M     + +H TF  VL AC  +  +E+G+   H+   
Sbjct: 601 NAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLS 660

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKA- 646
              L+  +   S +VD+  + G++  A    + MP   +   W +++S    HG+ + A 
Sbjct: 661 NYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAE 720

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
              +S ++L+    D   +V + +  ++AG+ +E  K  K M
Sbjct: 721 KAAYSILQLEP--EDSAAYVLLSNIYANAGMWNEVTKLRKMM 760



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/536 (26%), Positives = 257/536 (47%), Gaps = 33/536 (6%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   +K GF  DV   + L+++Y +   L  + + F  MP++N VSW+ I++G       
Sbjct: 197 HGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDL 256

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
               ++FKEM +AG  +++    SV R+C   G S  + G Q+H   LK++   D ++  
Sbjct: 257 RGGLELFKEMQKAGVGVSQSTFASVFRSC--AGLSALRLGSQLHGHALKTDFGTDVVIGT 314

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
             + MY  C   +D A+++F  +   +L S+N+II  Y+ R D                 
Sbjct: 315 ATLDMYMKCNNLSD-AQKLFNSLPNHNLQSYNAIIVGYA-RSDK---------------- 356

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             L  +E +      A   +V+ G     Q+  +  K+   S++ V +A++  + + G  
Sbjct: 357 -GLGLDEVSLSGAFRAC--AVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGAL 413

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRK-GKE-------VHGYLIRSGLFDMVAVGNGLVN 299
             A  +FE+M+ ++ VS N ++    + G E       +H  +I+S L     VG  L++
Sbjct: 414 VEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALID 473

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
           MY+KCG ++ +  +   +  +  VSWN +ISG       EEA   F  M   G+   NF+
Sbjct: 474 MYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFT 533

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
             + L +CA+L  + LG+QIH + +K  L SD  +S+ L+ +Y+  G +     +F   P
Sbjct: 534 YATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP 593

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG- 478
             D V+WN+++  +A    L  EA+K +  M+     PN  TF+ +L A     + + G 
Sbjct: 594 NRDFVTWNAMVCGYA-QHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGL 652

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
           H  H+ +  Y +  +    + ++   G+ G++    ++   M    D V W +++S
Sbjct: 653 HYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 708



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 185/409 (45%), Gaps = 62/409 (15%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
              C+    +  G+Q H   +       V V+N L+ +Y     L    KVF  MP+ D 
Sbjct: 49  FQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDT 108

Query: 424 VSWNSVIGAFADS---------------------EALVS---------EAVKYYLDMRRA 453
           VSWN+++  +A                        +L+S         + +  +L M R 
Sbjct: 109 VSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRM 168

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G   +  TF  +L + SS      G Q+H   +K     +    +ALL  Y KC ++D  
Sbjct: 169 GTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCS 228

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            + F  M E ++ VSW+++I+G + N+ L   + L   M + G  +   TFA+V  +CA 
Sbjct: 229 IQFFHSMPE-KNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAG 287

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           ++ L  G ++H   ++     DVVIG+A +DMY KC  +  A + F+ +P  N+ S+N++
Sbjct: 288 LSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAI 347

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I GYAR    DK L L           D V+  G   AC+      EG        QV+G
Sbjct: 348 IVGYAR---SDKGLGL-----------DEVSLSGAFRACAVIKGDLEGL-------QVHG 386

Query: 694 L-IPQLEQ-----FSCMVDLLGRAGELDK----IEEFINKMPITPNSLI 732
           L +  L Q      + ++D+ G+ G L +     EE +++  ++ N++I
Sbjct: 387 LSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAII 435



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 124/263 (47%), Gaps = 37/263 (14%)

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           TF +I    S       G Q HA++I         + N L+  Y KC +++   K+F  M
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 521 SER------------------------------RDEVSWNSMISGYIHNELLPKAMNLVW 550
            +R                              RD VSWNS+ISGY+HN    K +++  
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 551 FMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCG 610
            M + G   D  TFA VL +C+S+     G+++H   V+   + DVV GSAL+DMY+KC 
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
           ++D + +FF  MP +N  SW+++I+G  ++      L LF +M+  G      TF  V  
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFR 283

Query: 671 ACSHAGLVDEGFKHFKSMSQVYG 693
           +C+       G    +  SQ++G
Sbjct: 284 SCA-------GLSALRLGSQLHG 299



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 47/218 (21%)

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           TF+ +   C+    L  G + HA  +    +  V + + L+ MY KC  +++A + FD M
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 623 PVRNVYSWNSM-------------------------------ISGYARHGHGDKALTLFS 651
           P R+  SWN+M                               ISGY  +G   K + +F 
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC-------M 704
           QM   G + D  TF  VL +CS   L D G        Q++GL  ++  F C       +
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCS--SLEDHG-----GGIQIHGLAVKM-GFDCDVVTGSAL 215

Query: 705 VDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
           +D+  +  +LD   +F + MP   N + W  ++  C +
Sbjct: 216 LDMYAKCKKLDCSIQFFHSMP-EKNWVSWSAIIAGCVQ 252



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 52/97 (53%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H QI+K     D ++ +TL+++Y + G++     +F++ P+R+ V+W  +V GY  
Sbjct: 550 GKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQ 609

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G+  EA K+F+ M       N     +VLRAC   G
Sbjct: 610 HGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMG 646


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/659 (35%), Positives = 365/659 (55%), Gaps = 6/659 (0%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           +V+  LI SGL     +    +N     G ++ +   FR +   D + WN +I G  Q  
Sbjct: 20  QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 79

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
             +  I  +  M+   +  + F+ +  L +C       +G+QIHG+  K G  S+V V N
Sbjct: 80  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQN 139

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           +L+S+YA  G +S    VF  + +   VSW S+I  +  +   + EA+  + +MR+    
Sbjct: 140 SLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPM-EALNVFKEMRQCNVK 198

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P+ +  ++++ A ++      G  +H  V K  +  E  I  +L + Y K G ++     
Sbjct: 199 PDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFF 258

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F RM E+ + + WN+MISGY +N    +A+ L   M+ +  R+D  T  + + A A V +
Sbjct: 259 FNRM-EKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGS 317

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           LE    +     ++    D  + + L+DMY+KCG I  A   FD +  ++V  W+ MI G
Sbjct: 318 LELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMG 377

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           Y  HGHG +A+ L+++MK  G  P+  TF+G+L+AC ++GLV EG++ F  M   +G+ P
Sbjct: 378 YGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPD-HGIEP 436

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAAN 756
             + +SC+VDLLGRAG L++  +FI  MPI P   +W  +L AC     RK  LG  AA 
Sbjct: 437 HHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSAC--KIHRKVRLGEIAAE 494

Query: 757 MLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV 816
            LF ++P N  +YV L+N+YAS   W  VA  R  M +  + K+ G S + +   +  F 
Sbjct: 495 QLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQ 554

Query: 817 AGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF- 875
            GD SHP+   I+E+L  L ++++ AGYVP  +  L DL  E  E+ + +HSE++AVA+ 
Sbjct: 555 VGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYG 614

Query: 876 VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +++      +RI KNLR C +CHSA K ISK+V REI++RD+ RFHHF DG CSCGD+W
Sbjct: 615 IISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 218/466 (46%), Gaps = 49/466 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           ++Q++  G     FL    IN  +  GD+  A K F E+ + + + W  I+ GYT K + 
Sbjct: 22  YVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIV 81

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           +   +M+ +M  +    N +    VL+AC   G S    G Q+H    K     +  V N
Sbjct: 82  DAPIRMYMDMQISQVHPNCFTFLYVLKACG--GTSVEGIGKQIHGQTFKYGFGSNVFVQN 139

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L++MY         AR +F+++  R ++SW SIIS Y Q GD +    +F  M+    +
Sbjct: 140 SLVSMYAK-FGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMR----Q 194

Query: 188 YSLKPNEYTFGSLITAAYSSV--------LSG----------SYLLQQILAMVKKAGLL- 228
            ++KP+     S++T AY++V        + G            ++  +  M  K GL+ 
Sbjct: 195 CNVKPDWIALVSVMT-AYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVE 253

Query: 229 -----------SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV----VSMNGLMEGRR 273
                       +L + +A++SG+A  G    A K+F +MI KN+    ++M   +    
Sbjct: 254 VARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASA 313

Query: 274 K------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
           +       + + GY+ +S   D   V  GL++MYAKCG+I  +R VF  +  KD V W+ 
Sbjct: 314 QVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSV 373

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           MI G   +G  +EAI  +  M++ G+  ++ + I  L++C + G +  G ++       G
Sbjct: 374 MIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHG 433

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
           ++      + ++ L   AGYL++       MP    VS W +++ A
Sbjct: 434 IEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSA 479



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 201/453 (44%), Gaps = 54/453 (11%)

Query: 128 VLIAMYGSCLESTDC--ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           ++I    +CL   D   A + F E+   D++ WN+II  Y+Q+    +  +++  MQ   
Sbjct: 36  LMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQIS- 94

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
               + PN +TF  ++ A   + + G  + +QI     K G  S+++V ++LVS +A+ G
Sbjct: 95  ---QVHPNCFTFLYVLKACGGTSVEG--IGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFG 149

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEG-----------------RR--------------- 273
              YAR +F+++  + VVS   ++ G                 R+               
Sbjct: 150 QISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMT 209

Query: 274 ---------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                    +GK +HG + + GL     +   L  MYAK G ++ +R  F  M   + + 
Sbjct: 210 AYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLIL 269

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           WN MISG   NG  EEAI  F  M    +   + ++ S + + A +G + L + + G   
Sbjct: 270 WNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYIS 329

Query: 385 KLGLDSDVSVSNALLSLYADAG--YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
           K     D  V+  L+ +YA  G  YL+RC  VF  + + D V W+ +I  +        E
Sbjct: 330 KSEYRDDTFVNTGLIDMYAKCGSIYLARC--VFDRVADKDVVLWSVMIMGYG-LHGHGQE 386

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           A+  Y +M++AG  PN  TFI +L A  +  + K G ++   +  + +       + ++ 
Sbjct: 387 AICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVD 446

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             G+ G ++        M  +     W +++S 
Sbjct: 447 LLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSA 479



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 181/367 (49%), Gaps = 3/367 (0%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK++HG   + G    V V N LV+MYAK G I  +R VF  +  +  VSW ++ISG  Q
Sbjct: 119 GKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQ 178

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG   EA+  F  MR+  +     +L+S +++  ++  +  G+ IHG   KLGL+ +  +
Sbjct: 179 NGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDI 238

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             +L ++YA  G +      F  M + + + WN++I  +A++     EA+K + +M    
Sbjct: 239 VISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANN-GYGEEAIKLFREMITKN 297

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
              + +T  + + A++     +L   +   + K    ++T +   L+  Y KCG +    
Sbjct: 298 IRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLAR 357

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
            +F R+++ +D V W+ MI GY  +    +A+ L   M Q G   +  TF  +L+AC + 
Sbjct: 358 CVFDRVAD-KDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNS 416

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSM 633
             ++ G E+        +E      S +VD+  + G ++ A  F   MP++  V  W ++
Sbjct: 417 GLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGAL 476

Query: 634 ISGYARH 640
           +S    H
Sbjct: 477 LSACKIH 483


>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/579 (38%), Positives = 335/579 (57%), Gaps = 13/579 (2%)

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           S I  L  C ++  I   +Q+H   +  G   D+ ++N LL  YA    +     +F  +
Sbjct: 5   SCIDLLLRCRNVFHI---RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGL 61

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
              D  +W+ ++G FA +          + ++ R G +P+  T   ++      +  ++G
Sbjct: 62  TMRDSKTWSVMVGGFAKAGDHAG-CYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIG 120

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
             +H  V+K+ + ++  +  +L+  Y KC  ++D +++F RM  + D V+W  MI  Y  
Sbjct: 121 RVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSK-DLVTWTVMIGAYAD 179

Query: 539 NELLPKAMNLVWF--MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
                   +LV F  M + G   D     TV++ACA +  + R    +   VR     DV
Sbjct: 180 CNAYE---SLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDV 236

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
           ++G+A++DMY+KCG ++ A   FD M  +NV SW++MI+ Y  HG G  A+ LF  M   
Sbjct: 237 ILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSC 296

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
             LP+ VTFV +L ACSHAGL++EG + F SM + + + P ++ ++CMVDLLGRAG LD+
Sbjct: 297 AILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDE 356

Query: 717 IEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMY 776
               I  M +  +  +W  +LGA CR +  K EL  KAAN L E++PQN  +YVLL+N+Y
Sbjct: 357 ALRLIEAMTVEKDERLWSALLGA-CRIH-SKMELAEKAANSLLELQPQNPGHYVLLSNIY 414

Query: 777 ASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELN 836
           A  GKWE VAK R  M + ++KK  G +W+ + +  + F  GD SHP+   IYE L  L 
Sbjct: 415 AKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLI 474

Query: 837 QKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCG 895
           +K+  AGYVP T F L D+E E K++++  HSEK+A+AF ++      PIRI KNLRVCG
Sbjct: 475 KKLEMAGYVPDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCG 534

Query: 896 DCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           DCH+  K +S I+ R I++RD+NRFHHFNDG CSCGDYW
Sbjct: 535 DCHTFSKMVSSIMRRSIIVRDANRFHHFNDGTCSCGDYW 573



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 192/398 (48%), Gaps = 28/398 (7%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL--- 332
           ++VH +++ +G    + + N L+  YA+   IDD+ S+F  +  +DS +W+ M+ G    
Sbjct: 20  RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79

Query: 333 -DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
            D  GCY      F  + R G+   N++L   + +C     + +G+ IH   LK GL SD
Sbjct: 80  GDHAGCYA----TFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSD 135

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
             V  +L+ +YA    +    ++F  M   D V+W  +IGA+AD  A   E++  +  MR
Sbjct: 136 HFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAY--ESLVLFDRMR 193

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             G  P+ V  + ++ A +           +  +++   + +  +  A++  Y KCG ++
Sbjct: 194 EEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVE 253

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
              ++F RM E ++ +SW++MI+ Y ++     A++L   M+      +  TF ++L AC
Sbjct: 254 SAREVFDRMKE-KNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYAC 312

Query: 572 ASVATLERGM-------EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
           +    +E G+       E HA  VR     DV   + +VD+  + GR+D A R  + M V
Sbjct: 313 SHAGLIEEGLRFFNSMWEEHA--VRP----DVKHYTCMVDLLGRAGRLDEALRLIEAMTV 366

Query: 625 -RNVYSWNSMISGYARHGH---GDKALTLFSQMKLDGP 658
            ++   W++++     H      +KA     +++   P
Sbjct: 367 EKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNP 404



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 135/262 (51%), Gaps = 10/262 (3%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++ +G   D+ + N L+  Y +   +  A  LFD +  R+S +W+ +V G+   G  
Sbjct: 23  HAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDH 82

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
                 F+E++R G   + Y L  V+R C++   +  + G  +H +VLK     D  V  
Sbjct: 83  AGCYATFRELLRCGVTPDNYTLPFVIRTCRD--RTDLQIGRVIHDVVLKHGLLSDHFVCA 140

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY  C+   D A+R+FE + ++DL++W  +I  Y+   +      LF RM+ EG  
Sbjct: 141 SLVDMYAKCIVVED-AQRLFERMLSKDLVTWTVMIGAYAD-CNAYESLVLFDRMREEG-- 196

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             + P++    +++ A   + L   +  +     + + G   D+ +G+A++  +A+ G+ 
Sbjct: 197 --VVPDKVAMVTVVNAC--AKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSV 252

Query: 248 YYARKIFEQMIQKNVVSMNGLM 269
             AR++F++M +KNV+S + ++
Sbjct: 253 ESAREVFDRMKEKNVISWSAMI 274



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 170/373 (45%), Gaps = 63/373 (16%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR 168
           QVH  V+ +    D +++N L+  Y    ++ D A  +F+ +  RD  +W+ ++  +++ 
Sbjct: 21  QVHAHVVANGTLQDLVIANKLLYTYAQ-HKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79

Query: 169 GDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL 228
           GD    +  F    RE  R  + P+ YT   +I        +   + + I  +V K GLL
Sbjct: 80  GDHAGCYATF----RELLRCGVTPDNYTLPFVIRTCRDR--TDLQIGRVIHDVVLKHGLL 133

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM------------------- 269
           SD +V ++LV  +A+      A+++FE+M+ K++V+   ++                   
Sbjct: 134 SDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYESLVLFDRMR 193

Query: 270 -EG--------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
            EG                      + +  + Y++R+G    V +G  +++MYAKCG+++
Sbjct: 194 EEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVE 253

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA 368
            +R VF  M  K+ +SW+ MI+    +G  ++AI  F  M    ++ +  + +S L +C+
Sbjct: 254 SAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACS 313

Query: 369 SLGWIMLGQQIHGEGLKL--------GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP- 419
             G I        EGL+          +  DV     ++ L   AG L   L++   M  
Sbjct: 314 HAGLI-------EEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTV 366

Query: 420 EHDQVSWNSVIGA 432
           E D+  W++++GA
Sbjct: 367 EKDERLWSALLGA 379



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           ++ H  +LKHG   D F+C +L+++Y +   +  A +LF+ M  ++ V+W  ++  Y   
Sbjct: 121 RVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADC 180

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
             + E+  +F  M   G + ++ A+ +V+ AC + G          +  ++++  + D +
Sbjct: 181 N-AYESLVLFDRMREEGVVPDKVAMVTVVNACAKLG--AMHRARFANDYIVRNGFSLDVI 237

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           +   +I MY  C  S + AR +F+ ++ +++ISW+++I+ Y   G       LF  M   
Sbjct: 238 LGTAMIDMYAKC-GSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMM--- 293

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQIL----AMVKKAGLLSDLYVGSALVSG 240
               ++ PN  TF SL+ A      S + L+++ L    +M ++  +  D+   + +V  
Sbjct: 294 -LSCAILPNRVTFVSLLYAC-----SHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDL 347

Query: 241 FARLGNFYYARKIFEQM 257
             R G    A ++ E M
Sbjct: 348 LGRAGRLDEALRLIEAM 364


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 242/710 (34%), Positives = 398/710 (56%), Gaps = 54/710 (7%)

Query: 189 SLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
           +L+P    F +L+  + S   ++    +  QI+     +GL SD ++ + L++  ++   
Sbjct: 44  NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIV----SGLQSDTFLANILINVCSKSDR 99

Query: 247 FYYARKIFEQMIQKNVVSMNGLME------------------GRR--------------- 273
              AR +F++M  KN+++ + ++                    R+               
Sbjct: 100 VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 159

Query: 274 ---------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                    KG ++HG+++RSG    V VG  L++ Y+K G I+++R VF  +  K +V+
Sbjct: 160 ACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVT 219

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W T+I+G  + G    ++  F  MR   ++   + + S LS+C+ L ++  G+QIH   L
Sbjct: 220 WTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVL 279

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           + G + DVSV N L+  Y     +    K+F  M   + +SW ++I  +  + +   EA+
Sbjct: 280 RRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQN-SFDWEAM 338

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
           K + +M R GW P+G    ++L +  S    + G QVHA  IK N+ ++  ++N L+  Y
Sbjct: 339 KLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMY 398

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            K   + D +K+F  M+E+ + +S+N+MI GY   E L +A+ L   M  R Q+ + FTF
Sbjct: 399 AKSNLLIDAKKVFDVMAEQ-NVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTF 457

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
           A +++A +++A+L  G + H   V+  L+F   + +ALVDMY+KCG I+ A + F+    
Sbjct: 458 AALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIW 517

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           R+V  WNSMIS +A+HG  ++AL +F +M  +G  P++VTFV VLSACSHAG V++G  H
Sbjct: 518 RDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNH 577

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           F SM   +G+ P  E ++C+V LLGR+G+L + +EFI KMPI P +++WR++L AC  A 
Sbjct: 578 FNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAG 636

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
               ELG+ AA M    +P+++ +Y+LL+N++AS G W DV K R  M  +EV KE G S
Sbjct: 637 --NVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRS 694

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFD 854
           W+ + + V+VF+A D +H E D I   L  L Q ++ AGYVP     L +
Sbjct: 695 WIEVNNKVNVFIARDTTHREAD-IGSVLDILIQHIKGAGYVPDATALLMN 743



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 156/544 (28%), Positives = 278/544 (51%), Gaps = 13/544 (2%)

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
           ++ N    R+ F  ++Q ++ S N ++      K +HG +I SGL     + N L+N+ +
Sbjct: 41  QIPNLRPKRREFANLLQLSI-SRNPIIHY----KIIHGQIIVSGLQSDTFLANILINVCS 95

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM-RRDGLMSSNFSLI 361
           K   +D++R VF  M  K+ ++W++M+S   Q G  EEA+M F  + R+ G   + F L 
Sbjct: 96  KSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLA 155

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S + +C  LG +  G Q+HG  ++ G D DV V  +L+  Y+  G +     VF  + E 
Sbjct: 156 SVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK 215

Query: 422 DQVSWNSVIGAFAD-SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
             V+W ++I  +     + VS  ++ +  MR     P+     ++L+A S     + G Q
Sbjct: 216 TAVTWTTIIAGYTKCGRSAVS--LELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQ 273

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +HA V++     + ++ N L+  Y KC  +    K+F +M   ++ +SW +MISGY+ N 
Sbjct: 274 IHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMV-VKNIISWTTMISGYMQNS 332

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
              +AM L   M + G + D F   +VL++C S   LE+G +VHA  ++A LE D  + +
Sbjct: 333 FDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKN 392

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
            L+DMY+K   +  A + FD+M  +NV S+N+MI GY+      +AL LF +M++    P
Sbjct: 393 GLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKP 452

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           +  TF  +++A S+   +  G + F +     GL       + +VD+  + G +++  + 
Sbjct: 453 NEFTFAALITAASNLASLRHG-QQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKM 511

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
            N   I  + + W +++    +    +  LG     M   ++P N V +V + +  +  G
Sbjct: 512 FNS-SIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQP-NYVTFVAVLSACSHAG 569

Query: 781 KWED 784
           + ED
Sbjct: 570 RVED 573



 Score =  226 bits (575), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 161/574 (28%), Positives = 279/574 (48%), Gaps = 54/574 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K+ H QI+  G   D FL N LINV  +   + +A  +FD+MP +N ++W+ +VS Y+ +
Sbjct: 69  KIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQ 128

Query: 65  GMSNEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           G S EA  +F ++ R +G   N + L SV+RAC + G    + G Q+H  V++S    D 
Sbjct: 129 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGV--VEKGAQLHGFVVRSGFDQDV 186

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V   LI  Y S   + + AR +F+++  +  ++W +II+ Y++ G +    +LF++M+ 
Sbjct: 187 YVGTSLIDFY-SKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRE 245

Query: 184 EGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
                ++ P+ Y   S+++A +    L G    +QI A V + G   D+ V + L+  + 
Sbjct: 246 T----NVVPDRYVVSSVLSACSMLEFLEGG---KQIHAYVLRRGTEMDVSVVNVLIDFYT 298

Query: 243 RLGNFYYARKIFEQMIQKNVVS-----------------------MN------------- 266
           +       RK+F+QM+ KN++S                       MN             
Sbjct: 299 KCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTS 358

Query: 267 -----GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                G  E   +G++VH Y I++ L     V NGL++MYAK   + D++ VF  M  ++
Sbjct: 359 VLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQN 418

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            +S+N MI G        EA+  F  MR      + F+  + +++ ++L  +  GQQ H 
Sbjct: 419 VISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHN 478

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
           + +K+GLD    V+NAL+ +YA  G +    K+F      D V WNS+I   A       
Sbjct: 479 QLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQ-HGEAE 537

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           EA+  + +M + G  PN VTF+ +L+A S     + G      +  + +   T     ++
Sbjct: 538 EALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACVV 597

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           S  G+ G++ + ++   +M      + W S++S 
Sbjct: 598 SLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSA 631



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 143/482 (29%), Positives = 239/482 (49%), Gaps = 70/482 (14%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K A+L H  +++ GF  DV++  +LI+ Y + G++  A  +FD++ ++ +V+W  I++GY
Sbjct: 169 KGAQL-HGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGY 227

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKF---GMQVHCLVLKSN 118
           T  G S  + ++F +M     + +RY + SVL AC     S  +F   G Q+H  VL+  
Sbjct: 228 TKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSAC-----SMLEFLEGGKQIHAYVLRRG 282

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              D  V NVLI  Y  C       R++F+++  +++ISW ++IS Y Q        KLF
Sbjct: 283 TEMDVSVVNVLIDFYTKC-NRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLF 341

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
             M R G+    KP+ +   S++T+  S  ++  G    +Q+ A   KA L SD +V + 
Sbjct: 342 GEMNRLGW----KPDGFACTSVLTSCGSREALEQG----RQVHAYTIKANLESDEFVKNG 393

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------ 272
           L+  +A+      A+K+F+ M ++NV+S N ++EG                         
Sbjct: 394 LIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPN 453

Query: 273 -----------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                            R G++ H  L++ GL     V N LV+MYAKCG+I+++R +F 
Sbjct: 454 EFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFN 513

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
             I +D V WN+MIS   Q+G  EEA+  F  M ++G+  +  + ++ LS+C+  G +  
Sbjct: 514 SSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVED 573

Query: 376 G----QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI 430
           G      + G G+K G +    V    +SL   +G L    +    MP E   + W S++
Sbjct: 574 GLNHFNSMPGFGIKPGTEHYACV----VSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLL 629

Query: 431 GA 432
            A
Sbjct: 630 SA 631



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 224/485 (46%), Gaps = 41/485 (8%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  +L+ G   DV + N LI+ Y +   + +  KLFD+M  +N +SW  ++SGY   
Sbjct: 272 KQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQN 331

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
               EA K+F EM R G+  + +A  SVL +C        + G QVH   +K+N   D  
Sbjct: 332 SFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCG--SREALEQGRQVHAYTIKANLESDEF 389

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V N LI MY       D A+++F+ +  +++IS+N++I  YS +       +LF  M   
Sbjct: 390 VKNGLIDMYAKSNLLID-AKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEM--- 445

Query: 185 GFRYSL-KPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
             R  L KPNE+TF +LITAA  S L+     QQ    + K GL    +V +ALV  +A+
Sbjct: 446 --RVRLQKPNEFTFAALITAA--SNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAK 501

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYL------IRSGLFDMVAVGNGL 297
            G+   ARK+F   I ++VV  N ++    +  E    L      ++ G+         +
Sbjct: 502 CGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAV 561

Query: 298 VNMYAKCGTIDDSRSVFRFMIG----KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
           ++  +  G ++D  + F  M G      +  +  ++S L ++G   EA   F  + +  +
Sbjct: 562 LSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEA-KEF--IEKMPI 618

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCL 412
             +     S LS+C   G + LG+  +   + +  D   S S  LLS ++A  G  +   
Sbjct: 619 EPAAIVWRSLLSACRIAGNVELGK--YAAEMAISTDPKDSGSYILLSNIFASKGMWADVK 676

Query: 413 KVFFLMPEHDQV-----SW---NSVIGAFADSEALVSEA-VKYYLD-----MRRAGWSPN 458
           KV   M   + V     SW   N+ +  F   +    EA +   LD     ++ AG+ P+
Sbjct: 677 KVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREADIGSVLDILIQHIKGAGYVPD 736

Query: 459 GVTFI 463
               +
Sbjct: 737 ATALL 741


>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 685

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 220/611 (36%), Positives = 340/611 (55%), Gaps = 5/611 (0%)

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           +NT+I+G   N  + E +  F ++R+ GL    F+    L +C       LG  +H   +
Sbjct: 79  YNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVV 138

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           K G + DV+   +LLS+Y+ +G L+   KVF  +PE   V+W ++   +  +     EA+
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYT-TAGKHREAI 197

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
             +  M   G  P+    + +L+A         G  +   + +  +   + +   L++ Y
Sbjct: 198 DLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLY 257

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            KCG+M+    +F  M E+ D V+W++MI GY  N    + +     M+Q   + D F+ 
Sbjct: 258 AKCGKMEKARSVFDSMGEK-DIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSI 316

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
              LS+CAS+  L+ G    +   R     ++ + +AL+DMY+KCG +      F  M  
Sbjct: 317 VGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKE 376

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           +++   N+ ISG A++GH   +  +F Q +  G  PD  TF+G+L  C HAGL+ +G + 
Sbjct: 377 KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRF 436

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           F ++S VY L   +E + CMVDL GRAG LD     I  MP+ PN+++W  +L  C    
Sbjct: 437 FNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLV- 495

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
            + T+L       L  +EP NA NYV L+N+Y+  G+W++ A+ R  M    +KK  G S
Sbjct: 496 -KDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYS 554

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLV 864
           W+ ++  VH F+A D+SHP  D IY KL++L  +MR  G+VP T+F  FD+E E KE ++
Sbjct: 555 WIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVL 614

Query: 865 SYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
            +HSEK+AVAF +++ +    IR++KNLRVCGDCH   K ISKI  REIV+RD+NRFH F
Sbjct: 615 GHHSEKLAVAFGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCF 674

Query: 924 NDGKCSCGDYW 934
            +G CSC DYW
Sbjct: 675 TNGSCSCNDYW 685



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/422 (24%), Positives = 198/422 (46%), Gaps = 16/422 (3%)

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM-----------EGRRKGK 276
             ++++ + L++GF     F+    +F   I+K+ ++++G               R+ G 
Sbjct: 73  FPNIFLYNTLINGFVNNHLFHETLDLFLS-IRKHGLNLHGFTFPLVLKACTRASNRKLGI 131

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           ++H  +++ G    VA    L+++Y+  G ++D+  VF  +  +  V+W  + SG    G
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAG 191

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
            + EAI  F  M   G+   ++ ++  LS+C  +G +  G+ I     ++ +  +  V  
Sbjct: 192 KHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRT 251

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
            L++LYA  G + +   VF  M E D V+W+++I  +A S +   E ++++L M +    
Sbjct: 252 TLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYA-SNSFPKEGIEFFLQMLQENLK 310

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P+  + +  L++ +S     LG    + + ++       + NAL+  Y KCG M    ++
Sbjct: 311 PDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEV 370

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F  M E +D V  N+ ISG   N  +  +  +     + G   D  TF  +L  C     
Sbjct: 371 FKEMKE-KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGL 429

Query: 577 LERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMI 634
           ++ G+   +A      L+  V     +VD++ + G +D A R    MP+R N   W +++
Sbjct: 430 IQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALL 489

Query: 635 SG 636
           SG
Sbjct: 490 SG 491



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 175/370 (47%), Gaps = 56/370 (15%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  ++K GF +DV    +L+++Y   G L  A K+F+E+P+R+ V+W  + SGYT  G 
Sbjct: 133 LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGK 192

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKFGMQVHCLVLKSNQTFDGL 124
             EA  +FK+MV  G   + Y +  VL AC   G   SG      +  + ++ N      
Sbjct: 193 HREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNS----F 248

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V   L+ +Y  C    + AR +F+ +  +D+++W+++I  Y+         + F +M +E
Sbjct: 249 VRTTLVNLYAKC-GKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQE 307

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
               +LKP++++    +++  S  L    L +  ++++ +   L++L++ +AL+  +A+ 
Sbjct: 308 ----NLKPDQFSIVGFLSSCAS--LGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKC 361

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE--------------------------- 277
           G      ++F++M +K++V MN  + G  K                              
Sbjct: 362 GAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLL 421

Query: 278 ---VHGYLIRSGL--FDMVAVGNGL----------VNMYAKCGTIDDS-RSVFRFMIGKD 321
              VH  LI+ GL  F+ ++    L          V+++ + G +DD+ R +    +  +
Sbjct: 422 CGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPN 481

Query: 322 SVSWNTMISG 331
           ++ W  ++SG
Sbjct: 482 AIVWGALLSG 491



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 106/471 (22%), Positives = 199/471 (42%), Gaps = 56/471 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H+ ++ H   +D FL N L+   +       +  LF      N   +  +++G+ + 
Sbjct: 30  KQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNN 89

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            + +E   +F  + + G  L+ +    VL+AC     S  K G+ +H LV+K     D  
Sbjct: 90  HLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRA--SNRKLGIDLHSLVVKCGFNHDVA 147

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
               L+++Y       D A ++FEEI  R +++W ++ S Y+  G       LF +M   
Sbjct: 148 AMTSLLSIYSGSGRLND-AHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEM 206

Query: 185 GFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           G R    P+ Y    +++A      + SG ++++ +  M     +  + +V + LV+ +A
Sbjct: 207 GVR----PDSYFIVQVLSACVHVGDLDSGEWIVKHMEEM----EMQKNSFVRTTLVNLYA 258

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGL----FDMVA 292
           + G    AR +F+ M +K++V+ + +++G       ++G E    +++  L    F +V 
Sbjct: 259 KCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVG 318

Query: 293 -------------------------------VGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                                          + N L++MYAKCG +     VF+ M  KD
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKD 378

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IH 380
            V  N  ISGL +NG  + +   F    + G+     + +  L  C   G I  G +  +
Sbjct: 379 IVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN 438

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI 430
                  L   V     ++ L+  AG L    ++   MP   + + W +++
Sbjct: 439 AISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALL 489



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 142/317 (44%), Gaps = 42/317 (13%)

Query: 21  FLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRA 80
           F+  TL+N+Y + G +  A  +FD M +++ V+W+ ++ GY       E  + F +M++ 
Sbjct: 248 FVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQE 307

Query: 81  GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST 140
               +++++   L +C   G      G     L+ +     +  ++N LI MY  C    
Sbjct: 308 NLKPDQFSIVGFLSSCASLG--ALDLGEWGISLIDRHEFLTNLFMANALIDMYAKC---G 362

Query: 141 DCAR--RIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             AR   +F+E++ +D++  N+ IS  ++ G     F +F + ++ G    + P+  TF 
Sbjct: 363 AMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG----ISPDGSTFL 418

Query: 199 SLITAA-----------YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
            L+              + + +S  Y L++    V+  G + DL+  + ++    RL   
Sbjct: 419 GLLCGCVHAGLIQDGLRFFNAISCVYALKRT---VEHYGCMVDLWGRAGMLDDAYRL--- 472

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAV-----GN--GLVNM 300
                I +  ++ N +    L+ G R  K+    L  + L +++A+     GN   L N+
Sbjct: 473 -----ICDMPMRPNAIVWGALLSGCRLVKDTQ--LAETVLKELIALEPWNAGNYVQLSNI 525

Query: 301 YAKCGTIDDSRSVFRFM 317
           Y+  G  D++  V   M
Sbjct: 526 YSVSGRWDEAAEVRDMM 542



 Score = 46.2 bits (108), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 59/271 (21%), Positives = 101/271 (37%), Gaps = 41/271 (15%)

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
           +T     +VH   +   L  D  + + L+       +  Y+   F      N++ +N++I
Sbjct: 24  STFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLI 83

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-----------HAGLVDEGFK 683
           +G+  +    + L LF  ++  G      TF  VL AC+           H+ +V  GF 
Sbjct: 84  NGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFN 143

Query: 684 H-----------------FKSMSQVYGLIPQ--LEQFSCMVDLLGRAGELDKIEEFINKM 724
           H                      +V+  IP+  +  ++ +      AG+  +  +   KM
Sbjct: 144 HDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKM 203

Query: 725 P---ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ-NAVNYVLLANMYASGG 780
               + P+S     VL AC        + G      + EME Q N+     L N+YA  G
Sbjct: 204 VEMGVRPDSYFIVQVLSACVHVG--DLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCG 261

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
           K E       +M E ++      +W TM  G
Sbjct: 262 KMEKARSVFDSMGEKDI-----VTWSTMIQG 287


>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 221/603 (36%), Positives = 345/603 (57%), Gaps = 36/603 (5%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL----------- 412
           L SC S   + LG+Q+H   +  G  SD  +SN LL+LY+  G L   +           
Sbjct: 59  LQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNI 118

Query: 413 --------------------KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
                               K+F  MPE +  +WN+++      E    E +  +  M  
Sbjct: 119 MSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFE-FNEEGLGLFSRMNE 177

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G+ P+     ++L   +       G QVH  V K        + ++L   Y KCG + +
Sbjct: 178 LGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGE 237

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
            E++   M   ++ V+WN++I+G   N    + ++    M   G R D  TF +V+S+C+
Sbjct: 238 GERLIRAMPS-QNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCS 296

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
            +ATL +G ++HA  ++A     V + S+L+ MYS+CG ++Y+ + F      +V  W+S
Sbjct: 297 ELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSS 356

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           MI+ Y  HG G +A+ LF+QM+ +    + VTF+ +L ACSH GL ++G K F  M + Y
Sbjct: 357 MIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKY 416

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
           G+ P+LE ++CMVDLLGR G +++ E  I  MP+  + + W+T+L AC     +KTE+ R
Sbjct: 417 GVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSAC--KIHKKTEMAR 474

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
           + +  +F ++P++ V YVLL+N++AS  +W+DV+  RKAM++ ++KKE G SW+ +K+ +
Sbjct: 475 RISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQI 534

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
           H F  GD+SHP+   I   L+EL  +M+  GYVP     L D++ E KE  + +HSEK+A
Sbjct: 535 HQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLA 594

Query: 873 VAFVLTRNS-KLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
           +AF L       PIR++KNLRVC DCH A K+IS+I  REI++RDS+RFHHF +G+CSCG
Sbjct: 595 IAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCG 654

Query: 932 DYW 934
           DYW
Sbjct: 655 DYW 657



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 223/465 (47%), Gaps = 52/465 (11%)

Query: 237 LVSGFARLGNFYYARK-IFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN 295
           L   F R  +  ++   +F  ++Q + +S N L      GK++H  +I SG      + N
Sbjct: 37  LKQAFDRFSSHIWSEPSLFSHLLQ-SCISENSL----SLGKQLHSLIITSGCSSDKFISN 91

Query: 296 GLVNMYAKCGTIDDS-------------------------------RSVFRFMIGKDSVS 324
            L+N+Y+KCG +D +                               R +F  M  ++  +
Sbjct: 92  HLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVAT 151

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           WN M++GL Q    EE +  F  M   G +   F+L S L  CA L  ++ G+Q+HG   
Sbjct: 152 WNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVR 211

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           K G + ++ V ++L  +Y   G L    ++   MP  + V+WN++I   A +     E +
Sbjct: 212 KCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQN-GYPEEVL 270

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
             Y  M+ AG+ P+ +TF++++++ S  +    G Q+HA+VIK   +   ++ ++L+S Y
Sbjct: 271 DQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMY 330

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            +CG ++   K+F    E  D V W+SMI+ Y  +    +A++L   M Q     +  TF
Sbjct: 331 SRCGCLEYSLKVFLE-CENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTF 389

Query: 565 ATVLSACASVATLERGME-----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
            ++L AC+     E+G++     V   GV+  LE      + +VD+  + G ++ A    
Sbjct: 390 LSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEH----YTCMVDLLGRYGSVEEAEALI 445

Query: 620 DLMPVR-NVYSWNSMISGYARHGHGDKALTLFSQM-KLD--GPLP 660
             MPV+ +V +W +++S    H   + A  +  ++ +LD   P+P
Sbjct: 446 RSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVP 490



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 169/356 (47%), Gaps = 52/356 (14%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           ++  CN LIN Y R GD  +A K+FDEMP+RN  +W  +V+G      + E   +F  M 
Sbjct: 117 NIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMN 176

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             GFL + +ALGSVLR C   G      G QVH  V K    F+ +V + L  MY  C  
Sbjct: 177 ELGFLPDEFALGSVLRGC--AGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKC-G 233

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
           S     R+   + ++++++WN++I+  +Q G    V   ++ M+  GFR    P++ TF 
Sbjct: 234 SLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFR----PDKITFV 289

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           S+I++       G    QQI A V KAG    + V S+L+S ++R G   Y+ K+F +  
Sbjct: 290 SVISSCSELATLGQG--QQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECE 347

Query: 259 QKNVVS--------------------MNGLMEGRRKGKEV----------HGYLIRSGL- 287
             +VV                      N + + + +  +V          H  L   G+ 
Sbjct: 348 NGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIK 407

Query: 288 -FDMVAVGNG----------LVNMYAKCGTIDDSRSVFRFM-IGKDSVSWNTMISG 331
            FD++    G          +V++  + G+++++ ++ R M +  D ++W T++S 
Sbjct: 408 FFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSA 463



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 129/263 (49%), Gaps = 9/263 (3%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  + K GF +++ + ++L ++Y++ G L    +L   MP +N V+W  +++G    G  
Sbjct: 207 HGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYP 266

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            E    +  M  AGF  ++    SV+ +C E    G   G Q+H  V+K+  +    V +
Sbjct: 267 EEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLG--QGQQIHAEVIKAGASLIVSVIS 324

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            LI+MY  C    + + ++F E E  D++ W+S+I+ Y   G  +    LF++M++E   
Sbjct: 325 SLISMYSRC-GCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQE--- 380

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             L+ N+ TF SL+ A     L     ++    MV+K G+   L   + +V    R G+ 
Sbjct: 381 -KLEANDVTFLSLLYACSHCGLKEKG-IKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSV 438

Query: 248 YYARKIFEQM-IQKNVVSMNGLM 269
             A  +   M ++ +V++   L+
Sbjct: 439 EEAEALIRSMPVKADVITWKTLL 461



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/412 (22%), Positives = 176/412 (42%), Gaps = 84/412 (20%)

Query: 97  QEC-GPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC------------------- 136
           Q C   +    G Q+H L++ S  + D  +SN L+ +Y  C                   
Sbjct: 60  QSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIM 119

Query: 137 ---------LESTD--CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
                      S D   AR++F+E+  R++ +WN++++   Q         LFSRM   G
Sbjct: 120 SCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELG 179

Query: 186 FRYSLKPNEYTFGSLI--TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           F     P+E+  GS++   A   ++++G    +Q+   V+K G   +L V S+L   + +
Sbjct: 180 FL----PDEFALGSVLRGCAGLRALVAG----RQVHGYVRKCGFEFNLVVVSSLAHMYMK 231

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRR------------------------------ 273
            G+     ++   M  +NVV+ N L+ GR                               
Sbjct: 232 CGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSV 291

Query: 274 -----------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                      +G+++H  +I++G   +V+V + L++MY++CG ++ S  VF      D 
Sbjct: 292 ISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDV 351

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           V W++MI+    +G   EAI  F  M ++ L +++ + +S L +C+  G    G +    
Sbjct: 352 VCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDL 411

Query: 383 GL-KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            + K G+   +     ++ L    G +     +   MP + D ++W +++ A
Sbjct: 412 MVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSA 463



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 45/213 (21%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID---------- 613
           F+ +L +C S  +L  G ++H+  + +    D  I + L+++YSKCG++D          
Sbjct: 55  FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114

Query: 614 ---------------------YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
                                 A + FD MP RNV +WN+M++G  +    ++ L LFS+
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174

Query: 653 MKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ------LEQFSCMVD 706
           M   G LPD      VL  C+       G +   +  QV+G + +      L   S +  
Sbjct: 175 MNELGFLPDEFALGSVLRGCA-------GLRALVAGRQVHGYVRKCGFEFNLVVVSSLAH 227

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           +  + G L + E  I  MP + N + W T++  
Sbjct: 228 MYMKCGSLGEGERLIRAMP-SQNVVAWNTLIAG 259


>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1305

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 283/933 (30%), Positives = 453/933 (48%), Gaps = 104/933 (11%)

Query: 21   FLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR- 79
            F+   LI  Y+  G+   AS +F     RN VSW   +      G+  E  K+ +E VR 
Sbjct: 458  FISKCLITRYLEFGEFGYASAVFFLGFPRNQVSWRDFLEKAEDFGV--EKYKVLEEFVRL 515

Query: 80   --AGFLLNRYALGSVLRACQECGPSGFKF-GMQVH-CLVLKSNQTFDGLVSNVLIAMYGS 135
               G   +   L  V R C       ++F G  +H  L+ +     D  V + L+  YG 
Sbjct: 516  QNKGVNFDEVVLAMVFRICAVL---MYRFLGFTIHGGLIKRGLDNSDTRVVSALMGFYGR 572

Query: 136  CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
            C+ S D A +IF+E+  RD ++WN I+ V  Q G+     KLF  M+  G     K  + 
Sbjct: 573  CV-SLDLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSG----AKAYDS 627

Query: 196  TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
            T   L+    +    G    +QI   V + G  S++ + ++L+  ++R G    +RK+F 
Sbjct: 628  TMVKLLQVCSNK--EGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFN 685

Query: 256  QMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
             M+ +N+ S                              N +V+ Y + G +DD+  +  
Sbjct: 686  SMVDRNLSSW-----------------------------NSIVSSYTRLGYVDDAMGLLD 716

Query: 316  FM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
             M    +  D V+WN+++SG        +AI     ++  GL  +  S+ S L +    G
Sbjct: 717  EMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPG 776

Query: 372  WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI- 430
             + LG+ IHG  ++  L  DV V   L+ +Y   GYL     VF +M E + V+WNS+I 
Sbjct: 777  LVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLIS 836

Query: 431  -----GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
                 G   ++EAL+S        M + G   N VT+                       
Sbjct: 837  GLSYTGLLKEAEALISR-------MEKEGIKSNAVTW----------------------- 866

Query: 486  IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE---VSWNSMISGYIHNELL 542
                        N+L+S Y   G+ +    +  +M +   E   VSW +++SG   N   
Sbjct: 867  ------------NSLVSGYATWGKTEKALAVVGKMKKNGVEPNVVSWTAILSGCSKNGNF 914

Query: 543  PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
               + +   M + G   +  T +++L     ++ L  G EVH+  ++  L  D  + +AL
Sbjct: 915  GNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSFCLKNNLTRDAHVATAL 974

Query: 603  VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
            VDMY+K G +  A+  F  +  + + SWN MI GYA    G++ + +F+ M   G  PD 
Sbjct: 975  VDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDA 1034

Query: 663  VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFIN 722
            +TF  VLS C ++GLV EG+K+F  M   YG+IP +E  SCMV+LLGR+G LD+  +FI 
Sbjct: 1035 ITFTSVLSVCKNSGLVREGWKYFDLMRSHYGVIPTIEHCSCMVELLGRSGYLDEAWDFIR 1094

Query: 723  KMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKW 782
             MP+ P++ IW   L +C     R  EL   A   L  +EP N+ NY+++ N+Y++  +W
Sbjct: 1095 TMPLKPDATIWGAFLSSC--KIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRW 1152

Query: 783  EDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDA 842
             DV + R +M    V+ +   SW+ +   VH+F A  ++HP++  IY +L +L  +M+ +
Sbjct: 1153 GDVERIRNSMSNNRVRVQDLWSWIQIDQTVHIFYAEGKAHPDEGEIYFELYKLVSEMKKS 1212

Query: 843  GYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKL-PIRIMKNLRVCGDCHSAF 901
            GY+P T+    ++    KE L+  H+EK+A+ + L +   + PIR++KN  +C DCH+  
Sbjct: 1213 GYMPDTRCIHQNVSESEKEKLLMGHTEKLAMTYGLIKKKGIAPIRVVKNTNLCSDCHTVA 1272

Query: 902  KFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            K+IS +  REIVL++  R HHF DGKCSC + W
Sbjct: 1273 KYISVLRNREIVLQEGARVHHFRDGKCSCNNSW 1305



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 181/741 (24%), Positives = 316/741 (42%), Gaps = 86/741 (11%)

Query: 7    FHLQILKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
             H  ++K G    D  + + L+  Y R   L  A+K+FDEMP R+ ++W  IV      G
Sbjct: 546  IHGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSG 605

Query: 66   MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
               +A K+F+ M  +G       +  +L+ C      GF  G Q+H  VL+     +  +
Sbjct: 606  NWEKAVKLFRVMRFSGAKAYDSTMVKLLQVC--SNKEGFAQGRQIHGYVLRLGFESNVSM 663

Query: 126  SNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
             N LI MY     LES+   R++F  +  R+L SWNSI+S Y++ G       L   M+ 
Sbjct: 664  CNSLIVMYSRNGKLESS---RKVFNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMET 720

Query: 184  EGFRYS-------------------------------LKPNEYTFGSLITAAYSSVLSGS 212
             G +                                 LKPN  +  SL+ A Y   L   
Sbjct: 721  CGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVK- 779

Query: 213  YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG- 271
             L + I   V +  L  D+YV + L+  + + G   YAR +F+ M +KN+V+ N L+ G 
Sbjct: 780  -LGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGL 838

Query: 272  -----RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM----IGKDS 322
                  ++ + +   + + G+       N LV+ YA  G  + + +V   M    +  + 
Sbjct: 839  SYTGLLKEAEALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGKMKKNGVEPNV 898

Query: 323  VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
            VSW  ++SG  +NG +   +  F  M+ +G+  ++ ++ S L     L  +  G+++H  
Sbjct: 899  VSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSF 958

Query: 383  GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
             LK  L  D  V+ AL+ +YA +G L    ++F+ +      SWN +I  +A       E
Sbjct: 959  CLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRR-GEE 1017

Query: 443  AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--AL 500
             +  +  M  AG  P+ +TF ++L+   +  + + G + +  +++ +     TIE+   +
Sbjct: 1018 GIAVFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGWK-YFDLMRSHYGVIPTIEHCSCM 1076

Query: 501  LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNELLPKAMNLVWFMMQRGQRL 559
            +   G+ G +D+       M  + D   W + +S   IH +L  +   + W   +R Q L
Sbjct: 1077 VELLGRSGYLDEAWDFIRTMPLKPDATIWGAFLSSCKIHRDL--ELAEIAW---KRLQVL 1131

Query: 560  DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
            +    A  +      + L R  +V    +R  +  + V    + D++S   +ID     F
Sbjct: 1132 EPHNSANYMMMINLYSNLNRWGDVER--IRNSMSNNRV---RVQDLWSWI-QIDQTVHIF 1185

Query: 620  DLMPVRNVYSWNSMISGYARHGHGDKALTLF---SQMKLDGPLPDHVTFVGVLSACSHAG 676
                            G A    G+    L+   S+MK  G +PD       +S      
Sbjct: 1186 -------------YAEGKAHPDEGEIYFELYKLVSEMKKSGYMPDTRCIHQNVSESEKEK 1232

Query: 677  LVDEGFKHFKSMSQVYGLIPQ 697
            L+     H + ++  YGLI +
Sbjct: 1233 LL---MGHTEKLAMTYGLIKK 1250



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 213/494 (43%), Gaps = 75/494 (15%)

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN-FC 346
           F++  +   L+  Y + G    + +VF     ++ VSW   +   +  G  +  ++  F 
Sbjct: 454 FELEFISKCLITRYLEFGEFGYASAVFFLGFPRNQVSWRDFLEKAEDFGVEKYKVLEEFV 513

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD-SDVSVSNALLSLYADA 405
            ++  G+      L      CA L +  LG  IHG  +K GLD SD  V +AL+  Y   
Sbjct: 514 RLQNKGVNFDEVVLAMVFRICAVLMYRFLGFTIHGGLIKRGLDNSDTRVVSALMGFYGRC 573

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
             L    K+F  MP+ D ++WN ++     S     +AVK +  MR +G      T + +
Sbjct: 574 VSLDLANKIFDEMPKRDDLAWNEIVMVNLQSGNW-EKAVKLFRVMRFSGAKAYDSTMVKL 632

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           L   S+      G Q+H  V++    +  ++ N+L+  Y + G+++   K+F  M + R+
Sbjct: 633 LQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVD-RN 691

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS-------VATLE 578
             SWNS++S Y     +  AM L+  M   G + D  T+ ++LS  AS       +A L+
Sbjct: 692 LSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLK 751

Query: 579 R----------------------------GMEVHACGVRACLEFDVVIGSALVDMYSKCG 610
           R                            G  +H   +R  L +DV + + L+DMY K G
Sbjct: 752 RIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTG 811

Query: 611 RIDYASRFFDLMPVRNVYSWNSMI-----------------------------------S 635
            + YA   FD+M  +N+ +WNS+I                                   S
Sbjct: 812 YLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVTWNSLVS 871

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
           GYA  G  +KAL +  +MK +G  P+ V++  +LS CS  G    G K F  M Q  G+ 
Sbjct: 872 GYATWGKTEKALAVVGKMKKNGVEPNVVSWTAILSGCSKNGNFGNGLKIFLKM-QEEGVS 930

Query: 696 PQLEQFSCMVDLLG 709
           P     S ++ +LG
Sbjct: 931 PNSATISSLLRILG 944



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 162/371 (43%), Gaps = 79/371 (21%)

Query: 2    KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
            K  K  H  ++++   YDV++  TLI++Y++ G L  A  +FD M ++N V+W  ++SG 
Sbjct: 779  KLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGL 838

Query: 62   THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-T 120
            ++ G+  EA  +   M + G                                 +KSN  T
Sbjct: 839  SYTGLLKEAEALISRMEKEG---------------------------------IKSNAVT 865

Query: 121  FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            ++ LVS    A +G   ++     ++ +     +++SW +I+S  S+ G+  +  K+F +
Sbjct: 866  WNSLVSGY--ATWGKTEKALAVVGKMKKNGVEPNVVSWTAILSGCSKNGNFGNGLKIFLK 923

Query: 181  MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
            MQ EG    + PN  T  SL+       LS  Y  +++ +   K  L  D +V +ALV  
Sbjct: 924  MQEEG----VSPNSATISSLLRIL--GCLSLLYSGKEVHSFCLKNNLTRDAHVATALVDM 977

Query: 241  FARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---RKGKEVHGYLIRSGLFDMVAVGNGL 297
            +A+ G+   A +IF  +  K + S N ++ G    R+G+E                G  +
Sbjct: 978  YAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEE----------------GIAV 1021

Query: 298  VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
             N   + G            I  D++++ +++S    +G   E    F       LM S+
Sbjct: 1022 FNAMLEAG------------IEPDAITFTSVLSVCKNSGLVREGWKYF------DLMRSH 1063

Query: 358  FSLISTLSSCA 368
            + +I T+  C+
Sbjct: 1064 YGVIPTIEHCS 1074


>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/560 (39%), Positives = 347/560 (61%), Gaps = 5/560 (0%)

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G   H + +++GL +D   SN L+++Y+  G +    K+F  MP    VSWN+++G+   
Sbjct: 66  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 125

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           +     +A+  ++ M++ G S +  T  +++ A ++        Q+H   +K  + +   
Sbjct: 126 N-GDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVF 184

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           +  ALL  Y KCG + D   +F  M ER D V+W+SM++GY+ NEL  +A+ L       
Sbjct: 185 VGTALLDVYAKCGLVKDANLVFECMPERSD-VTWSSMVAGYVQNELYEEALVLFHRAQAM 243

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G   + FT ++ LSACA+ A L  G +V A   +  +  ++ + S+L+DMY+KCG I+ A
Sbjct: 244 GLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEA 303

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
              F  +  +NV  WN+++SG++RH    +A+  F +M+  G  P+ +T++ VLSACSH 
Sbjct: 304 YTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHL 363

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           GLV++G K+F  M +V+ + P +  +SCMVD+LGRAG L + ++FI++MP    + +W +
Sbjct: 364 GLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGS 423

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           +L +C     R  EL   AA  LFE+EP NA N+VLL+N+YA+  +WE+VA+AR  +KE+
Sbjct: 424 LLASC--RIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKES 481

Query: 796 EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
           + KKE G SW+ +K  VH F+ G+ +HP    IY KL++L  +M+  GY  +T+  L D+
Sbjct: 482 KAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDV 541

Query: 856 EPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
           E   K++L+ +HSEK+A+ F ++      PIRIMKNLR+CGDCHS  K  S I  REI++
Sbjct: 542 EESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIV 601

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RD+NRFHHF +G CSCG++W
Sbjct: 602 RDTNRFHHFKNGYCSCGEFW 621



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 193/364 (53%), Gaps = 4/364 (1%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +G   H  +IR GL       N L+NMY+KCG ++ +R +F  M  +  VSWNTM+    
Sbjct: 65  EGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHT 124

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           QNG  E+A++ F  M+++G   S F++ S + +CA+   +   +Q+HG  LK  LDS+V 
Sbjct: 125 QNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVF 184

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V  ALL +YA  G +     VF  MPE   V+W+S++  +  +E L  EA+  +   +  
Sbjct: 185 VGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNE-LYEEALVLFHRAQAM 243

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G   N  T  + L+A ++ +    G QV A   K  + +   + ++L+  Y KCG +++ 
Sbjct: 244 GLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEA 303

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
             +F+ + E ++ V WN+++SG+  +    +AM     M Q G   +  T+ +VLSAC+ 
Sbjct: 304 YTVFSSV-EEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSH 362

Query: 574 VATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WN 631
           +  +E+G +     +R   +  +V+  S +VD+  + G +  A  F D MP     S W 
Sbjct: 363 LGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWG 422

Query: 632 SMIS 635
           S+++
Sbjct: 423 SLLA 426



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 191/407 (46%), Gaps = 53/407 (13%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           GM  H  +++     D + SN+L+ MY  C    + AR++F+E+  R L+SWN+++  ++
Sbjct: 66  GMACHAQIIRVGLRADTITSNMLMNMYSKC-GLVESARKLFDEMPVRSLVSWNTMVGSHT 124

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
           Q GD      LF +MQ+EG   S    E+T  S++ A  +      +  +Q+     K  
Sbjct: 125 QNGDCEKALVLFMQMQKEGTSCS----EFTVSSVVCACAAKCC--VFECKQLHGFALKTA 178

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--------------- 271
           L S+++VG+AL+  +A+ G    A  +FE M +++ V+ + ++ G               
Sbjct: 179 LDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFH 238

Query: 272 --------------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
                                       +GK+V     ++G+   + V + L++MYAKCG
Sbjct: 239 RAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCG 298

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            I+++ +VF  +  K+ V WN ++SG  ++    EA++ F  M++ G+  ++ + IS LS
Sbjct: 299 IIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLS 358

Query: 366 SCASLGWIMLGQQIHGEGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
           +C+ LG +  G++     +++  +  +V   + ++ +   AG L         MP     
Sbjct: 359 ACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATA 418

Query: 425 S-WNSVIGA--FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
           S W S++ +     +  L   A K+  ++     + N V   NI AA
Sbjct: 419 SMWGSLLASCRIYRNLELAEVAAKHLFEIEPHN-AGNHVLLSNIYAA 464



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 167/348 (47%), Gaps = 26/348 (7%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H QI++ G   D    N L+N+Y + G + SA KLFDEMP R+ VSW  +V  +T  G  
Sbjct: 70  HAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDC 129

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRAC-QECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            +A  +F +M + G   + + + SV+ AC  +C     K   Q+H   LK+    +  V 
Sbjct: 130 EKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECK---QLHGFALKTALDSNVFVG 186

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
             L+ +Y  C    D A  +FE +  R  ++W+S+++ Y Q         LF R Q  G 
Sbjct: 187 TALLDVYAKCGLVKD-ANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMG- 244

Query: 187 RYSLKPNEYTF--GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
              L+ N++T        AA ++++ G    +Q+ A+  K G+ S+++V S+L+  +A+ 
Sbjct: 245 ---LEHNQFTISSALSACAARAALIEG----KQVQAVSCKTGIGSNIFVISSLIDMYAKC 297

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNGL--VNMY 301
           G    A  +F  + +KNVV  N ++ G  R  + +   +    +  M    N +  +++ 
Sbjct: 298 GIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVL 357

Query: 302 AKC---GTIDDSRSVFRFMIGKDSVSWNT-----MISGLDQNGCYEEA 341
           + C   G ++  R  F  MI   +VS N      M+  L + G   EA
Sbjct: 358 SACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEA 405



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 7/201 (3%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H   LK     +VF+   L++VY + G +  A+ +F+ MP+R+ V+W+ +V+GY 
Sbjct: 166 ECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYV 225

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
              +  EA  +F      G   N++ + S L AC     +    G QV  +  K+    +
Sbjct: 226 QNELYEEALVLFHRAQAMGLEHNQFTISSALSACAA--RAALIEGKQVQAVSCKTGIGSN 283

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V + LI MY  C    + A  +F  +E ++++ WN+I+S +S+   ++     F +MQ
Sbjct: 284 IFVISSLIDMYAKC-GIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQ 342

Query: 183 REGFRYSLKPNEYTFGSLITA 203
           + G    + PN+ T+ S+++A
Sbjct: 343 QMG----ICPNDITYISVLSA 359


>gi|225459429|ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Vitis vinifera]
          Length = 700

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 244/726 (33%), Positives = 389/726 (53%), Gaps = 39/726 (5%)

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI----QKNVVSMNGLM------EG 271
           + + GL   +   + ++SG  + G    A  +F +M+      N++++  ++      + 
Sbjct: 1   MPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKA 60

Query: 272 RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
            R GK +H   ++ G+   V V   +++MY+KCG+ D +  VF     K++  WN MI+ 
Sbjct: 61  LRLGKAIHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAA 120

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
               G  E+A+    +M++DG      +  + LS  A  G      ++  E +++GL  +
Sbjct: 121 YVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQMGLKPN 180

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLM-PEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           V   N L+S +  +G     LKVF +M    D  + N V+                 L M
Sbjct: 181 VVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLN----------------LSM 224

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
           R     PN +T    L A +  ++   G ++H   ++        + +AL+  Y KC +M
Sbjct: 225 R-----PNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDM 279

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
           D   K+F R+ + R+ VSWN++++GYI+N+   +A+ L   M+  G +    TF  +  A
Sbjct: 280 DSANKVFFRI-DGRNTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPA 338

Query: 571 CASVATLERGMEVHACGVRACL-EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           C  +A +  G  +H    +  L E    I SAL+DMY+KCG I  A   FD    ++V  
Sbjct: 339 CGDIAAIRFGRGLHGYAAKCQLDELKNAIASALIDMYAKCGSILDAKSVFDSEVEKDVPL 398

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           WN+MIS ++ HG    A  +F QM+L G LPDH+TFV +LSAC+  GLV+EG+K+F SM 
Sbjct: 399 WNAMISAFSVHGMARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVEEGWKYFNSME 458

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
             YG+   LE ++CMV +LG AG LD+  +FI +MP  P++ +W T+L A CR +    E
Sbjct: 459 ISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQA-CRVH-SNPE 516

Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMK 809
           +G +AA  LFE+EP NA NY+LL+N+Y S G W+     R  M+  ++     CS++T+ 
Sbjct: 517 IGERAAKALFELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVG 576

Query: 810 DGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSE 869
             +  F  G+ SHPE + I E   +L +KM  +GY P     +FD E +  +     H+E
Sbjct: 577 SHICTFKGGESSHPELEEILEAWDKLARKMELSGYFPLD--PVFDDEEKELDPFSCLHTE 634

Query: 870 KIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKC 928
           K+A+ F +++ N+  P+ + KN+R+C DCH++ K ISKI GREI ++D   +HH  DG C
Sbjct: 635 KLAICFGIISSNTYRPVHVSKNIRMCIDCHTSAKLISKIDGREIFVKDVCFYHHMKDGIC 694

Query: 929 SCGDYW 934
           SC D W
Sbjct: 695 SCQDRW 700



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 239/518 (46%), Gaps = 38/518 (7%)

Query: 46  MPDR----NSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGP 101
           MP+R       SW  I+SG    G   +A  MF  M+      N   + S+L AC   G 
Sbjct: 1   MPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACT--GL 58

Query: 102 SGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSI 161
              + G  +H + LK     +  V   +I MY  C  S D A ++F + E ++   WN +
Sbjct: 59  KALRLGKAIHAIALKHGIVGNVYVEGSVIDMYSKC-GSYDYAEKVFVKAENKNTAMWNEM 117

Query: 162 ISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAM 221
           I+ Y   G       L   MQ++G+    KP+  T+ ++++    + L       ++L+ 
Sbjct: 118 IAAYVNEGKVEDALGLLRSMQKDGW----KPDVITYNTILSGHARNGLKTQAF--ELLSE 171

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM----------------IQKNVVSM 265
           + + GL  ++   + L+SGF + G  Y A K+F  M                ++ N +++
Sbjct: 172 MVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITI 231

Query: 266 NGLMEGRR------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
            G +          +GKE+HGY +R+G    + V + LV+MYAKC  +D +  VF  + G
Sbjct: 232 TGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDG 291

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           +++VSWN +++G   N   EEA+  F  M  +GL  S+ + +    +C  +  I  G+ +
Sbjct: 292 RNTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGL 351

Query: 380 HGEGLKLGLDS-DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           HG   K  LD    ++++AL+ +YA  G +     VF    E D   WN++I AF+    
Sbjct: 352 HGYAAKCQLDELKNAIASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFS-VHG 410

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIE 497
           +   A   ++ M   G  P+ +TF+++L+A +   + + G +  ++  I Y VA      
Sbjct: 411 MARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHY 470

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             ++   G  G +D+      +M    D   W +++  
Sbjct: 471 TCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQA 508



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 148/547 (27%), Positives = 253/547 (46%), Gaps = 51/547 (9%)

Query: 157 SWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ 216
           SWN IIS   Q G       +FSRM      Y   PN  T  S++ A   + L    L +
Sbjct: 12  SWNGIISGCVQNGYLEDALDMFSRM----LWYPEDPNIITIASILPAC--TGLKALRLGK 65

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGK 276
            I A+  K G++ ++YV  +++  +++ G++ YA K+F +   KN    N ++       
Sbjct: 66  AIHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNEG 125

Query: 277 EVHGY--LIRS----GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI----GKDSVSWN 326
           +V     L+RS    G    V   N +++ +A+ G    +  +   M+      + VS+N
Sbjct: 126 KVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQMGLKPNVVSFN 185

Query: 327 TMISGLDQNGCYEEAIMNFCAMR--RDG----------LMSSNFSLISTLSSCASLGWIM 374
            +ISG  Q+G   EA+  F  M+   DG          +  +  ++   L +CA L    
Sbjct: 186 VLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWC 245

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
            G++IHG  L+ G + ++ VS+AL+ +YA    +    KVFF +   + VSWN+++  + 
Sbjct: 246 QGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYI 305

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN-E 493
            ++    EA+K +L+M   G  P+ +TF+ +  A    +  + G  +H    K  +   +
Sbjct: 306 YNKQ-PEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELK 364

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM 553
             I +AL+  Y KCG + D + +F    E +D   WN+MIS +  + +   A  +   M 
Sbjct: 365 NAIASALIDMYAKCGSILDAKSVFDSEVE-KDVPLWNAMISAFSVHGMARNAFAVFVQME 423

Query: 554 QRGQRLDHFTFATVLSACASVATLERG------MEVHACGVRACLEFDVVIGSALVDMYS 607
             G   DH TF ++LSACA    +E G      ME+ + GV A LE      + +V +  
Sbjct: 424 LLGILPDHITFVSLLSACARDGLVEEGWKYFNSMEI-SYGVAATLEH----YTCMVGILG 478

Query: 608 KCGRIDYASRFFDLMPV-RNVYSWNSMISGYARHGH---GDKALTLFSQMKLDGPLPDHV 663
             G +D A  F   MP   +   W +++     H +   G++A     +++     PD+ 
Sbjct: 479 GAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFELE-----PDNA 533

Query: 664 TFVGVLS 670
           T   +LS
Sbjct: 534 TNYMLLS 540



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 115/484 (23%), Positives = 199/484 (41%), Gaps = 94/484 (19%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H   LKHG   +V++  ++I++Y + G    A K+F +  ++N+  W  +++ Y +
Sbjct: 64  GKAIHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVN 123

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGF-KFGMQVHCLVLKSNQTFD 122
           +G   +A  + + M + G+  +     ++L        SG  + G++     L S     
Sbjct: 124 EGKVEDALGLLRSMQKDGWKPDVITYNTIL--------SGHARNGLKTQAFELLSEMVQM 175

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
           GL  NV                           +S+N +IS + Q G +    K+F  MQ
Sbjct: 176 GLKPNV---------------------------VSFNVLISGFQQSGLSYEALKVFRIMQ 208

Query: 183 --------REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ--QILAMVKKAGLLSDLY 232
                    E    S++PN  T    IT A  +    +   Q  +I     + G   +++
Sbjct: 209 SPSDGCNPNEVLNLSMRPNPIT----ITGALPACADLNLWCQGKEIHGYTLRNGFEPNIF 264

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR-------------------- 272
           V SALV  +A+  +   A K+F ++  +N VS N LM G                     
Sbjct: 265 VSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYIYNKQPEEALKLFLEMLGEG 324

Query: 273 ---------------------RKGKEVHGYLIRSGLFDMV-AVGNGLVNMYAKCGTIDDS 310
                                R G+ +HGY  +  L ++  A+ + L++MYAKCG+I D+
Sbjct: 325 LQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIASALIDMYAKCGSILDA 384

Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
           +SVF   + KD   WN MIS    +G    A   F  M   G++  + + +S LS+CA  
Sbjct: 385 KSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFVQMELLGILPDHITFVSLLSACARD 444

Query: 371 GWIMLG-QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNS 428
           G +  G +  +   +  G+ + +     ++ +   AG L   L     MP   D   W +
Sbjct: 445 GLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWAT 504

Query: 429 VIGA 432
           ++ A
Sbjct: 505 LLQA 508


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 251/714 (35%), Positives = 384/714 (53%), Gaps = 89/714 (12%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMIG--KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG-L 353
           LV   A  G + D+ + F  +    +D+V  N M+S   +      A+  F A+   G L
Sbjct: 98  LVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSL 157

Query: 354 MSSNFSLISTLSSCASLGWIMLGQ--QIHGEGLKLGLDSDVSVSNALLSLY-----ADAG 406
              ++S  + +S+   +  +      Q+H   LK G  + +SVSNAL++LY      +A 
Sbjct: 158 RPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEAS 217

Query: 407 YLSRCLKVFFLMPEHDQVSW-------------------------------NSVIGAFAD 435
           + +R  KV   MP+ D ++W                               N++I  +  
Sbjct: 218 WDAR--KVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY--NVANE 493
           S  + ++A + +  M       +  TF ++L+A ++      G  VH Q+I+   N   E
Sbjct: 276 S-GMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPE 334

Query: 494 TT--IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAM----- 546
               + NAL++ Y K G++   ++IF  M+  +D VSWN+++SGYI +  L KA+     
Sbjct: 335 AALPVNNALVTLYSKGGKIVIAKRIFDTMN-LKDVVSWNTILSGYIDSGCLDKAVEVFKV 393

Query: 547 -----NLVWFMMQRGQ---------------------RLDHFTFATVLSACASVATLERG 580
                +L W +M  G                      +   +T+A  ++AC  +  L+ G
Sbjct: 394 MPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHG 453

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
            ++HA  V+   E     G+AL+ MY+KCG ++ A   F +MP  +  SWN+MIS   +H
Sbjct: 454 RQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQH 513

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
           GHG +AL LF QM  +G  PD ++F+ +L+AC+HAGLVDEGF +F+SM + +G+ P  + 
Sbjct: 514 GHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDH 573

Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
           ++ ++DLLGR+G + +  + I  MP  P   IW  +L   CR N    E G  AA+ LF 
Sbjct: 574 YARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSG-CRTNG-DMEFGAYAADQLFR 631

Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           M PQ+   Y+LL+N Y++ G+W D A+ RK M++  VKKE GCSW+ +   +HVF+ GD 
Sbjct: 632 MIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDT 691

Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRN 880
            HPE   +Y+ L+ +  +MR  GYVP TKF L D+EP  KE ++  HSEK+AV F L   
Sbjct: 692 KHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLL-- 749

Query: 881 SKLP----IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
            KLP    + ++KNLR+CGDCH+A  F+SK VGREIV+RD  RFHHF DG+CSC
Sbjct: 750 -KLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802



 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 135/551 (24%), Positives = 242/551 (43%), Gaps = 73/551 (13%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVSGYTHKGMSNEACKMFKEMVRAG 81
            +L+      G L  A+  FD +P   R++V    ++S +    ++  A  +F  ++ +G
Sbjct: 96  TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155

Query: 82  FL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES- 139
            L  + Y+  +++ A  +          Q+HC VLKS       VSN LIA+Y  C    
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 215

Query: 140 --------------------------------TDCARRIFEEIETRDLISWNSIISVYSQ 167
                                            + AR +FEE++ +  + WN++IS Y Q
Sbjct: 216 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKA 225
            G     F+LF RM  E     +  +E+TF S+++A  ++   + G  +  QI+ +    
Sbjct: 276 SGMCADAFELFRRMVSE----KVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNF 331

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS 285
              + L V +ALV+ +++ G    A++IF+ M  K+VVS N ++ G              
Sbjct: 332 VPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSG-------------- 377

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
                          Y   G +D +  VF+ M  K+ +SW  M+SG    G  E+A+  F
Sbjct: 378 ---------------YIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLF 422

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             MR + +   +++    +++C  LG +  G+Q+H   ++ G ++  S  NALL++YA  
Sbjct: 423 NQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKC 482

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
           G ++    VF +MP  D VSWN++I A         EA++ +  M   G  P+ ++F+ I
Sbjct: 483 GAVNDARLVFLVMPNLDSVSWNAMISALG-QHGHGREALELFDQMVAEGIDPDRISFLTI 541

Query: 466 LAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           L A +   +   G H   +    + ++        L+   G+ G + +   +   M    
Sbjct: 542 LTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEP 601

Query: 525 DEVSWNSMISG 535
               W +++SG
Sbjct: 602 TPSIWEAILSG 612



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 137/307 (44%), Gaps = 18/307 (5%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV   NT+++ Y+  G L  A ++F  MP +N +SW  +VSGY H G+S +A K+F +M 
Sbjct: 367 DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMR 426

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
                   Y     + AC E G    K G Q+H  +++          N L+ MY  C  
Sbjct: 427 AEDVKPCDYTYAGAIAACGELG--ALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGA 484

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             D AR +F  +   D +SWN++IS   Q G      +LF +M  EG    + P+  +F 
Sbjct: 485 VND-ARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEG----IDPDRISFL 539

Query: 199 SLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           +++TA   + L   G +  +   +M +  G+       + L+    R G    AR + + 
Sbjct: 540 TILTACNHAGLVDEGFHYFE---SMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKT 596

Query: 257 MIQKNVVSM-NGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDS 310
           M  +   S+   ++ G R  G    G      LF M+   +G    L N Y+  G   D+
Sbjct: 597 MPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDA 656

Query: 311 RSVFRFM 317
             V + M
Sbjct: 657 ARVRKLM 663



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 170/416 (40%), Gaps = 107/416 (25%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASAS----KLFDEMPDRNSVSWACIV---- 58
            H  +LK G A  + + N LI +Y++  D   AS    K+ DEMPD++ ++W  +V    
Sbjct: 185 LHCSVLKSGAAAVLSVSNALIALYMKC-DTPEASWDARKVLDEMPDKDDLTWTTMVVGYV 243

Query: 59  ---------------------------SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGS 91
                                      SGY   GM  +A ++F+ MV     L+ +   S
Sbjct: 244 RRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTS 303

Query: 92  VLRACQECGPSGFKFGMQVHCLVLKSNQTFDG----LVSNVLIAMYGSCLESTDCARRIF 147
           VL AC   G   F  G  VH  +++    F       V+N L+ +Y    +    A+RIF
Sbjct: 304 VLSACANAG--FFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIV-IAKRIF 360

Query: 148 EEIETRDLISWNSIISVYSQRG---DTISVF----------------------------K 176
           + +  +D++SWN+I+S Y   G     + VF                            K
Sbjct: 361 DTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALK 420

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
           LF++M+ E     +KP +YT+   I A     L      +Q+ A + + G  +    G+A
Sbjct: 421 LFNQMRAE----DVKPCDYTYAGAIAAC--GELGALKHGRQLHAHLVQCGFEASNSAGNA 474

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFD-MVAVGN 295
           L++ +A+ G    AR +F  M   + VS N ++     G+  HG      LFD MVA G 
Sbjct: 475 LLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISAL--GQHGHGREALE-LFDQMVAEG- 530

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
                                 I  D +S+ T+++  +  G  +E    F +M+RD
Sbjct: 531 ----------------------IDPDRISFLTILTACNHAGLVDEGFHYFESMKRD 564



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 146/347 (42%), Gaps = 55/347 (15%)

Query: 498 NALLSCYGKCGEMDDCEKIF-ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
            +L++     G + D    F A    RRD V  N+M+S +    L   A+++   ++  G
Sbjct: 96  TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155

Query: 557 Q-RLDHFTFATVLSACASVATL--ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID 613
             R D ++F  ++SA   +  L      ++H   +++     + + +AL+ +Y KC   +
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 215

Query: 614 Y---ASRFFDLMP----------------------VRNVYS---------WNSMISGYAR 639
               A +  D MP                       R+V+          WN+MISGY +
Sbjct: 216 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM-SQVYGLIPQ- 697
            G    A  LF +M  +    D  TF  VLSAC++AG     F H KS+  Q+  L P  
Sbjct: 276 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGF----FVHGKSVHGQIIRLQPNF 331

Query: 698 -----LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
                L   + +V L  + G++   +   + M +  + + W T+L     + C       
Sbjct: 332 VPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK-DVVSWNTILSGYIDSGCLD----- 385

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKK 799
           KA  +   M  +N ++++++ + Y  GG  ED  K    M+  +VK 
Sbjct: 386 KAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKP 432



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 15/204 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H  +++ GF       N L+ +Y + G +  A  +F  MP+ +SVSW  ++S  
Sbjct: 451 KHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISAL 510

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKF--GMQVHCLVLKS 117
              G   EA ++F +MV  G   +R +  ++L AC   G    GF +   M+    +   
Sbjct: 511 GQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPG 570

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRI-FEEIETRDLISWNSIISVYSQRGD----TI 172
              +  L+   L+   G   E+ D  + + FE   +     W +I+S     GD      
Sbjct: 571 EDHYARLID--LLGRSGRIGEARDLIKTMPFEPTPS----IWEAILSGCRTNGDMEFGAY 624

Query: 173 SVFKLFSRMQREGFRYSLKPNEYT 196
           +  +LF  + +    Y L  N Y+
Sbjct: 625 AADQLFRMIPQHDGTYILLSNTYS 648


>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 462

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 206/461 (44%), Positives = 295/461 (63%), Gaps = 5/461 (1%)

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           +LG  +H+ VI+    +   ++N+LL  Y  CG++    K+F +M E+ D V+WNS+I+G
Sbjct: 5   RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK-DLVAWNSVING 63

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
           +  N    +A+ L   M  +G + D FT  ++LSACA +  L  G  VH   ++  L  +
Sbjct: 64  FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK- 654
           +   + L+D+Y++CGR++ A   FD M  +N  SW S+I G A +G G +A+ LF  M+ 
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
            +G LP  +TFVG+L ACSH G+V EGF++F+ M + Y + P++E F CMVDLL RAG++
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
            K  E+I  MP+ PN +IWRT+LGAC       ++L   A   + ++EP ++ +YVLL+N
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVHG--DSDLAEFARIQILQLEPNHSGDYVLLSN 301

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           MYAS  +W DV K RK M    VKK  G S V + + VH F+ GD+SHP+ D IY KLKE
Sbjct: 302 MYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKE 361

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL-TRNSKLPIRIMKNLRV 893
           +  ++R  GYVPQ      D+E E KE+ V YHSEKIA+AF+L +   + PI ++KNLRV
Sbjct: 362 MTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRV 421

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           C DCH A K +SK+  REIV+RD +RFHHF +G CSC DYW
Sbjct: 422 CADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 148/293 (50%), Gaps = 7/293 (2%)

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
           + LG+ IH   ++ G  S + V N+LL LYA+ G ++   KVF  MPE D V+WNSVI  
Sbjct: 4   VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN 492
           FA++     EA+  Y +M   G  P+G T +++L+A +      LG +VH  +IK  +  
Sbjct: 64  FAEN-GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
                N LL  Y +CG +++ + +F  M + ++ VSW S+I G   N    +A+ L  +M
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVD-KNSVSWTSLIVGLAVNGFGKEAIELFKYM 181

Query: 553 MQRGQRLD-HFTFATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCG 610
                 L    TF  +L AC+    ++ G E          +E  +     +VD+ ++ G
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 241

Query: 611 RIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           ++  A  +   MP++ NV  W +++     HG  D  L  F+++++    P+H
Sbjct: 242 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPNH 292



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 140/268 (52%), Gaps = 5/268 (1%)

Query: 269 MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
           M   R G+ +H  +IRSG   ++ V N L+++YA CG +  +  VF  M  KD V+WN++
Sbjct: 1   MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           I+G  +NG  EEA+  +  M   G+    F+++S LS+CA +G + LG+++H   +K+GL
Sbjct: 61  INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
             ++  SN LL LYA  G +     +F  M + + VSW S+I   A       EA++ + 
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA-VNGFGKEAIELFK 179

Query: 449 DMRRA-GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYG 505
            M    G  P  +TF+ IL A S   M K G + + + ++     E  IE+   ++    
Sbjct: 180 YMESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLA 238

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMI 533
           + G++    +    M  + + V W +++
Sbjct: 239 RAGQVKKAYEYIKSMPMQPNVVIWRTLL 266



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 108/198 (54%), Gaps = 8/198 (4%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +++ GF   +++ N+L+++Y   GD+ASA K+FD+MP+++ V+W  +++G+   G 
Sbjct: 10  IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 69

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA  ++ EM   G   + + + S+L AC + G      G +VH  ++K   T +   S
Sbjct: 70  PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG--ALTLGKRVHVYMIKVGLTRNLHSS 127

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ-REG 185
           NVL+ +Y  C    + A+ +F+E+  ++ +SW S+I   +  G      +LF  M+  EG
Sbjct: 128 NVLLDLYARCGRVEE-AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186

Query: 186 FRYSLKPNEYTFGSLITA 203
               L P E TF  ++ A
Sbjct: 187 ----LLPCEITFVGILYA 200



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 95/164 (57%), Gaps = 2/164 (1%)

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           +A +  G  +H+  +R+     + + ++L+ +Y+ CG +  A + FD MP +++ +WNS+
Sbjct: 1   MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I+G+A +G  ++AL L+++M   G  PD  T V +LSAC+  G +  G +    M +V G
Sbjct: 61  INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-G 119

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
           L   L   + ++DL  R G +++ +   ++M +  NS+ W +++
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 112/220 (50%), Gaps = 14/220 (6%)

Query: 105 KFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISV 164
           + G  +H +V++S       V N L+ +Y +C +    A ++F+++  +DL++WNS+I+ 
Sbjct: 5   RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVAS-AYKVFDKMPEKDLVAWNSVING 63

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
           +++ G       L++ M  +G    +KP+ +T  SL++A   + +    L +++   + K
Sbjct: 64  FAENGKPEEALALYTEMNSKG----IKPDGFTIVSLLSAC--AKIGALTLGKRVHVYMIK 117

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------RKGKEV 278
            GL  +L+  + L+  +AR G    A+ +F++M+ KN VS   L+ G       ++  E+
Sbjct: 118 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 177

Query: 279 HGYLIRS-GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
             Y+  + GL        G++   + CG + +    FR M
Sbjct: 178 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM 217



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 24/213 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H+ ++K G   ++   N L+++Y R G +  A  LFDEM D+NSVSW  ++ G   
Sbjct: 108 GKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 167

Query: 64  KGMSNEACKMFKEMVRA-GFLLNRYALGSVLRACQECG--PSGFKF--GMQVHCLVLKSN 118
            G   EA ++FK M    G L        +L AC  CG    GF++   M+    +    
Sbjct: 168 NGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRI 227

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIET----RDLISWNSIISVYSQRGDTISV 174
           + F  +V   L+A  G         ++ +E I++     +++ W +++   +  GD  S 
Sbjct: 228 EHFGCMVD--LLARAGQ-------VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGD--SD 276

Query: 175 FKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS 207
              F+R+Q       L+PN      L++  Y+S
Sbjct: 277 LAEFARIQ----ILQLEPNHSGDYVLLSNMYAS 305


>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Glycine max]
          Length = 591

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 221/598 (36%), Positives = 348/598 (58%), Gaps = 23/598 (3%)

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
           +++ N  ++  L  C +L  +   +Q+H + L  GL       + LL+  +     +   
Sbjct: 1   MLNLNHPILQKLQKCHNLNTL---KQVHAQMLTTGLSFQTYYLSHLLNTSSKFAS-TYAF 56

Query: 413 KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD-MRRAGWSPNGVTFINILAAASS 471
            +F  +P      +N++I +       +  A   Y   +      PN  TF ++  A +S
Sbjct: 57  TIFNHIPNPTLFLYNTLISSLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACAS 116

Query: 472 FSMGKLGHQVHAQVIKY-NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
               + G  +HA V+K+     +  ++N+LL+ Y K G++     +F ++SE  D  +WN
Sbjct: 117 HPWLQHGPPLHAHVLKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEP-DLATWN 175

Query: 531 SMISGYIHN-------------ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
           +M++ Y  +             ++  +A++L   M     + +  T   ++SAC+++  L
Sbjct: 176 TMLAAYAQSASHVSYSTSFEDADMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGAL 235

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
            +G   H   +R  L+ +  +G+ALVDMYSKCG ++ A + FD +  R+ + +N+MI G+
Sbjct: 236 SQGAWAHGYVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGF 295

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
           A HGHG++AL L+  MKL+  +PD  T V  + ACSH GLV+EG + F+SM  V+G+ P+
Sbjct: 296 AVHGHGNQALELYRNMKLEDLVPDGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPK 355

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
           LE + C++DLLGRAG L + EE +  MP+ PN+++WR++LGA         E+G  A   
Sbjct: 356 LEHYGCLIDLLGRAGRLKEAEERLQDMPMKPNAILWRSLLGAAKLHG--NLEMGEAALKH 413

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           L E+EP+ + NYVLL+NMYAS G+W DV + R  MK+  V K  G S V +   +H F+ 
Sbjct: 414 LIELEPETSGNYVLLSNMYASIGRWNDVKRVRMLMKDHGVDKLPGFSLVEINGAMHEFLT 473

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL 877
           GD++HP    IY K+ E+N+++ + G+ P+T   LFD+E E KED +SYHSE++A+AF L
Sbjct: 474 GDKAHPFSKEIYSKIGEINRRLLEYGHKPRTSEVLFDVEEEDKEDFLSYHSERLAIAFAL 533

Query: 878 -TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
              +S +PIRI+KNLRVCGDCH+  K IS    R+I++RD NRFHHF DG CSC DYW
Sbjct: 534 IASSSSMPIRIIKNLRVCGDCHAITKLISAAYQRDIIVRDRNRFHHFKDGSCSCLDYW 591



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 144/308 (46%), Gaps = 26/308 (8%)

Query: 249 YARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIR--SGLFDMVAVGNGLVNM 300
           Y   +  + +Q N  +   L +        + G  +H ++++     +D   V N L+N 
Sbjct: 91  YNHILTHKTLQPNSFTFPSLFKACASHPWLQHGPPLHAHVLKFLQPPYDPF-VQNSLLNF 149

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE-------------EAIMNFCA 347
           YAK G +  SR +F  +   D  +WNTM++   Q+  +              EA+  FC 
Sbjct: 150 YAKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQSASHVSYSTSFEDADMSLEALHLFCD 209

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M+   +  +  +L++ +S+C++LG +  G   HG  L+  L  +  V  AL+ +Y+  G 
Sbjct: 210 MQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRFVGTALVDMYSKCGC 269

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           L+   ++F  + + D   +N++IG FA      ++A++ Y +M+     P+G T +  + 
Sbjct: 270 LNLACQLFDELSDRDTFCYNAMIGGFA-VHGHGNQALELYRNMKLEDLVPDGATIVVTMF 328

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRD 525
           A S   + + G ++  + +K     E  +E+   L+   G+ G + + E+    M  + +
Sbjct: 329 ACSHGGLVEEGLEI-FESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMPMKPN 387

Query: 526 EVSWNSMI 533
            + W S++
Sbjct: 388 AILWRSLL 395



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/402 (22%), Positives = 171/402 (42%), Gaps = 71/402 (17%)

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
            +L+  Q+C         QVH  +L +  +F     + L+    S   ++  A  IF  I
Sbjct: 7   PILQKLQKC--HNLNTLKQVHAQMLTTGLSFQTYYLSHLLNT--SSKFASTYAFTIFNHI 62

Query: 151 ETRDLISWNSIISVYSQRGDTISV-FKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS-- 207
               L  +N++IS  +   D I + F L++ +       +L+PN +TF SL  A  S   
Sbjct: 63  PNPTLFLYNTLISSLTHHSDQIHLAFSLYNHILTHK---TLQPNSFTFPSLFKACASHPW 119

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
           +  G  L   +L  ++      D +V ++L++ +A+ G    +R +F+Q+ + ++ + N 
Sbjct: 120 LQHGPPLHAHVLKFLQPP---YDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNT 176

Query: 268 LMEG---------------------------------RRKGKEV---------------- 278
           ++                                   + K  EV                
Sbjct: 177 MLAAYAQSASHVSYSTSFEDADMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGALS 236

Query: 279 -----HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
                HGY++R+ L     VG  LV+MY+KCG ++ +  +F  +  +D+  +N MI G  
Sbjct: 237 QGAWAHGYVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFA 296

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK--LGLDSD 391
            +G   +A+  +  M+ + L+    +++ T+ +C+  G +  G +I  E +K   G++  
Sbjct: 297 VHGHGNQALELYRNMKLEDLVPDGATIVVTMFACSHGGLVEEGLEIF-ESMKGVHGMEPK 355

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           +     L+ L   AG L    +    MP + + + W S++GA
Sbjct: 356 LEHYGCLIDLLGRAGRLKEAEERLQDMPMKPNAILWRSLLGA 397



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 140/346 (40%), Gaps = 34/346 (9%)

Query: 17  AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG----------- 65
            YD F+ N+L+N Y + G L  +  LFD++ + +  +W  +++ Y               
Sbjct: 137 PYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQSASHVSYSTSFED 196

Query: 66  --MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
             MS EA  +F +M  +    N   L +++ AC   G      G   H  VL++N   + 
Sbjct: 197 ADMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLG--ALSQGAWAHGYVLRNNLKLNR 254

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V   L+ MY  C    + A ++F+E+  RD   +N++I  ++  G      +L+  M+ 
Sbjct: 255 FVGTALVDMYSKC-GCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMKL 313

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYL---LQQILAMVKKAGLLSDLYVGSALVSG 240
           E     L P+    G+ I     +   G  +   L+   +M    G+   L     L+  
Sbjct: 314 E----DLVPD----GATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDL 365

Query: 241 FARLGNFYYARKIFEQM-IQKNVVSMNGLM-EGRRKGKEVHGYLIRSGLFDMVAVGNG-- 296
             R G    A +  + M ++ N +    L+   +  G    G      L ++    +G  
Sbjct: 366 LGRAGRLKEAEERLQDMPMKPNAILWRSLLGAAKLHGNLEMGEAALKHLIELEPETSGNY 425

Query: 297 --LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
             L NMYA  G  +D + V R ++    V      S ++ NG   E
Sbjct: 426 VLLSNMYASIGRWNDVKRV-RMLMKDHGVDKLPGFSLVEINGAMHE 470



 Score = 46.2 bits (108), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 22/93 (23%), Positives = 48/93 (51%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +L++    + F+   L+++Y + G L  A +LFDE+ DR++  +  ++ G+   G  
Sbjct: 242 HGYVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHG 301

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           N+A ++++ M     + +   +   + AC   G
Sbjct: 302 NQALELYRNMKLEDLVPDGATIVVTMFACSHGG 334


>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 630

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/540 (39%), Positives = 335/540 (62%), Gaps = 10/540 (1%)

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           N L+++Y     L+   ++F  MP+ + +SW ++I A++  + +  +A++  + M R   
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCK-IHQKALELLVLMLRDNV 158

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            PN  T+ ++L + +  S  ++   +H  +IK  + ++  + +AL+  + K GE +D   
Sbjct: 159 RPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS 215

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F  M    D + WNS+I G+  N     A+ L   M + G   +  T  +VL AC  +A
Sbjct: 216 VFDEMVTG-DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 274

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            LE GM+ H   V+   + D+++ +ALVDMY KCG ++ A R F+ M  R+V +W++MIS
Sbjct: 275 LLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS 332

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
           G A++G+  +AL LF +MK  G  P+++T VGVL ACSHAGL+++G+ +F+SM ++YG+ 
Sbjct: 333 GLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGID 392

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           P  E + CM+DLLG+AG+LD   + +N+M   P+++ WRT+LGA CR   R   L   AA
Sbjct: 393 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA-CRVQ-RNMVLAEYAA 450

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
             +  ++P++A  Y LL+N+YA+  KW+ V + R  M++  +KKE GCSW+ +   +H F
Sbjct: 451 KKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAF 510

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
           + GD SHP+   + +KL +L  ++   GYVP+T F L DLE E  ED + +HSEK+A+AF
Sbjct: 511 IIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAF 570

Query: 876 -VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            ++T   +  IRI KNLR+CGDCH   K  SK+  R IV+R   R+HHF DGKCSCGDYW
Sbjct: 571 GLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDYW 630



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 219/453 (48%), Gaps = 46/453 (10%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +G  +  +L  +G   M+ + N L+NMY K   ++D+  +F  M  ++ +SW TMIS   
Sbjct: 79  EGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYS 138

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           +   +++A+     M RD +  + ++  S L SC  +  +   + +H   +K GL+SDV 
Sbjct: 139 KCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVF 195

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V +AL+ ++A  G     L VF  M   D + WNS+IG FA + +    A++ +  M+RA
Sbjct: 196 VRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN-SRSDVALELFKRMKRA 254

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G+     T  ++L A +  ++ +LG Q H  ++KY+   +  + NAL+  Y KCG ++D 
Sbjct: 255 GFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDA 312

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            ++F +M E RD ++W++MISG   N    +A+ L   M   G + ++ T   VL AC+ 
Sbjct: 313 LRVFNQMKE-RDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSH 371

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
              LE G                         Y +  +     + + + PVR  Y    M
Sbjct: 372 AGLLEDGW-----------------------YYFRSMK-----KLYGIDPVREHYG--CM 401

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-HAGLVDEGFKHFKSMSQVY 692
           I    + G  D A+ L ++M+ +   PD VT+  +L AC     +V   +    +  +V 
Sbjct: 402 IDLLGKAGKLDDAVKLLNEMECE---PDAVTWRTLLGACRVQRNMVLAEY----AAKKVI 454

Query: 693 GLIPQ-LEQFSCMVDLLGRAGELDKIEEFINKM 724
            L P+    ++ + ++   + + D +EE   +M
Sbjct: 455 ALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRM 487



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 160/342 (46%), Gaps = 42/342 (12%)

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGK-------------- 276
           +++ + L++ + +      A ++F+QM Q+NV+S   ++    K K              
Sbjct: 96  MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155

Query: 277 ------------------------EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
                                    +H  +I+ GL   V V + L++++AK G  +D+ S
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS 215

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           VF  M+  D++ WN++I G  QN   + A+  F  M+R G ++   +L S L +C  L  
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
           + LG Q H   +K   D D+ ++NAL+ +Y   G L   L+VF  M E D ++W+++I  
Sbjct: 276 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVA 491
            A +     EA+K +  M+ +G  PN +T + +L A S   + + G      + K Y + 
Sbjct: 334 LAQN-GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGID 392

Query: 492 NETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
                   ++   GK G++DD  K+   M    D V+W +++
Sbjct: 393 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 10/212 (4%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           D ++ H  I+K G   DVF+ + LI+V+ ++G+   A  +FDEM   +++ W  I+ G+ 
Sbjct: 177 DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
               S+ A ++FK M RAGF+  +  L SVLRAC   G +  + GMQ H  ++K +Q  D
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT--GLALLELGMQAHVHIVKYDQ--D 292

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            +++N L+ MY  C    D A R+F +++ RD+I+W+++IS  +Q G +    KLF RM+
Sbjct: 293 LILNNALVDMYCKCGSLED-ALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMK 351

Query: 183 REGFRYSLKPNEYTF-GSLITAAYSSVLSGSY 213
             G     KPN  T  G L   +++ +L   +
Sbjct: 352 SSG----TKPNYITIVGVLFACSHAGLLEDGW 379



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 131/253 (51%), Gaps = 16/253 (6%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           +FL N LIN+YV+   L  A +LFD+MP RN +SW  ++S Y+   +  +A ++   M+R
Sbjct: 96  MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
                N Y   SVLR+C     +G      +HC ++K     D  V + LI ++    E 
Sbjct: 156 DNVRPNVYTYSSVLRSC-----NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEP 210

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
            D A  +F+E+ T D I WNSII  ++Q   +    +LF RM+R GF       + T  S
Sbjct: 211 ED-ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGF----IAEQATLTS 265

Query: 200 LITAAYSSVLSGSYLLQQ-ILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           ++ A      +G  LL+  + A V       DL + +ALV  + + G+   A ++F QM 
Sbjct: 266 VLRAC-----TGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK 320

Query: 259 QKNVVSMNGLMEG 271
           +++V++ + ++ G
Sbjct: 321 ERDVITWSTMISG 333



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 132/316 (41%), Gaps = 68/316 (21%)

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG----MEVHACGVRACLEFDVV 597
           LP+AM  +  +   G   D  T++ ++  C S   +  G      ++  G R  +     
Sbjct: 42  LPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMM----F 97

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           + + L++MY K   ++ A + FD MP RNV SW +MIS Y++     KAL L   M  D 
Sbjct: 98  LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157

Query: 658 PLPDHVTFVGVLSACS--------HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
             P+  T+  VL +C+        H G++ EG +     S V+         S ++D+  
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLE-----SDVF-------VRSALIDVFA 205

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK---------------------- 747
           + GE +      ++M +T ++++W +++G   + N R                       
Sbjct: 206 KLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQ-NSRSDVALELFKRMKRAGFIAEQATL 263

Query: 748 TELGRKAANM-LFEMEPQNAVNYV----------LLANMYASGGKWEDVAKARKAMKEAE 796
           T + R    + L E+  Q  V+ V           L +MY   G  ED  +    MKE +
Sbjct: 264 TSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323

Query: 797 VKKEAGCSWVTMKDGV 812
           V      +W TM  G+
Sbjct: 324 V-----ITWSTMISGL 334


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/575 (38%), Positives = 329/575 (57%), Gaps = 8/575 (1%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           + +++C     +  G+Q+H   +       V +   L+++Y   G L     V   MPE 
Sbjct: 15  AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 74

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
             VSW ++I  ++ +E  V EA+  ++ M RAG  PN  T   +L + S       G QV
Sbjct: 75  SVVSWTTMISGYSQTERHV-EALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQV 133

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H+ ++K N  +   + ++LL  Y K   + +  ++F  + ER D VS  ++ISGY    L
Sbjct: 134 HSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPER-DVVSCTAIISGYAQKGL 192

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +A++L   +   G + +H TF T+++A + +A+L+ G +VHA  +R  L F V + ++
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+DMYSKCG++ Y+ R FD M  R+V SWN+M+ GY RHG G + ++LF  +  +   PD
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKEVK-PD 311

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            VT + VLS CSH GLVDEG   F ++ +    +     + C++DLLGR+G L+K    I
Sbjct: 312 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLI 371

Query: 722 NKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
             MP      IW ++LGAC   AN    EL    A  L EMEP+NA NYV+L+N+YA+ G
Sbjct: 372 ENMPFESTPSIWGSLLGACRVHANVHVGEL---VAQKLLEMEPENAGNYVILSNIYAAAG 428

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
            W+DV K RK M E  V KE G SW+ +   +H F + +  HP K  I  K+KE+   ++
Sbjct: 429 MWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIK 488

Query: 841 DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHS 899
            AG+VP     L D++ E KE ++  HSEK+A+ F L      L IR+MKNLR+C DCH+
Sbjct: 489 AAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHN 548

Query: 900 AFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             KF+SK+  REI LRD NRFH    G C+CGDYW
Sbjct: 549 FAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 194/381 (50%), Gaps = 25/381 (6%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +G++VH  +I +     V +G  LV MY +CG +DD+R+V   M  +  VSW TMISG  
Sbjct: 28  EGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYS 87

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           Q   + EA+  F  M R G + + ++L + L+SC+    I  G+Q+H   +K   +S + 
Sbjct: 88  QTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMF 147

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V ++LL +YA +  +    +VF  +PE D VS  ++I  +A  + L  EA+  +  +   
Sbjct: 148 VGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYA-QKGLDEEALDLFRQLYSE 206

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G   N VTF  ++ A S  +    G QVHA +++  +     ++N+L+  Y KCG++   
Sbjct: 207 GMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYS 266

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            ++F  M E R  VSWN+M+ GY  + L  + ++L +  + +  + D  T   VLS C+ 
Sbjct: 267 RRVFDNMLE-RSVVSWNAMLMGYGRHGLGHEVISL-FKDLHKEVKPDSVTLLAVLSGCSH 324

Query: 574 VATLERGMEVHACGVRACLEFDVVIG--SAL---------VDMYSKCGRIDYASRFFDLM 622
              ++ G+++          FD V+   SAL         +D+  + GR++ A    + M
Sbjct: 325 GGLVDEGLDI----------FDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENM 374

Query: 623 PVRNVYS-WNSMISGYARHGH 642
           P  +  S W S++     H +
Sbjct: 375 PFESTPSIWGSLLGACRVHAN 395



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 244/490 (49%), Gaps = 56/490 (11%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H +++   +   VFL   L+ +YVR G L  A  + D MP+R+ VSW  ++SGY+
Sbjct: 28  EGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYS 87

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                 EA  +F +M+RAG + N Y L +VL +C   GP     G QVH L++K+N    
Sbjct: 88  QTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCS--GPQSIYQGKQVHSLLVKTNFESH 145

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V + L+ MY    E+   ARR+F+ +  RD++S  +IIS Y+Q+G       LF ++ 
Sbjct: 146 MFVGSSLLDMYAKS-ENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLY 204

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL---QQILAMVKKAGLLSDLYVGSALVS 239
            EG    ++ N  TF +L+TA     LSG   L   +Q+ A++ +  L   + + ++L+ 
Sbjct: 205 SEG----MQCNHVTFTTLVTA-----LSGLASLDYGKQVHALILRKELPFFVALQNSLID 255

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR-RKG---------KEVHGYLIRSGLFD 289
            +++ G   Y+R++F+ M++++VVS N ++ G  R G         K++H   ++     
Sbjct: 256 MYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVT 314

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT-----MISGLDQNGCYEEAIMN 344
           ++AV +G     +  G +D+   +F  ++ + S   +T     +I  L ++G  E+A+  
Sbjct: 315 LLAVLSGC----SHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNL 370

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYA 403
              M  +   S   SL   L +C     + +G+ +  + L+  ++ + + +  +LS +YA
Sbjct: 371 IENMPFESTPSIWGSL---LGACRVHANVHVGELVAQKLLE--MEPENAGNYVILSNIYA 425

Query: 404 DAGYLSRCLKVFFLM--------PEHDQVSWNSVIGAFADSEAL------VSEAVK-YYL 448
            AG      KV  LM        P    +  + VI  F  SE        ++  +K  ++
Sbjct: 426 AAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFV 485

Query: 449 DMRRAGWSPN 458
           D++ AG+ P+
Sbjct: 486 DIKAAGFVPD 495



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 1/162 (0%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +   ++AC     L  G +VHA  + A     V +G+ LV MY +CG +D A    D MP
Sbjct: 13  YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            R+V SW +MISGY++     +AL LF +M   G +P+  T   VL++CS    + +G K
Sbjct: 73  ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG-K 131

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
              S+         +   S ++D+  ++  + +     + +P
Sbjct: 132 QVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 173


>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
          Length = 1280

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 208/487 (42%), Positives = 306/487 (62%), Gaps = 5/487 (1%)

Query: 451  RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
            RR    P+  T+  ++ A +     + G  +HA+  K        ++N+L+  YG CG  
Sbjct: 796  RRRLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLF 855

Query: 511  DDCEKIFARMSER-RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
            +   K+F  M  R R+ VSWNSM++ +  N    + + + W M+      D FT  +VL+
Sbjct: 856  ESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLT 915

Query: 570  ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV-RNVY 628
            ACA    L  G  VH    +  L  +  + +AL+D+Y+KCG ++ A R F+ M + R V 
Sbjct: 916  ACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVV 975

Query: 629  SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
            SW S+I G A +G G +AL LFS M+ +  +P  +T VGVL ACSH GLVD+GF++F  M
Sbjct: 976  SWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRM 1035

Query: 689  SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT 748
             + YG+ P++E   CMVDLLGRAG +++  ++I  MP+ PN+++WRT+LG+C  A  +K 
Sbjct: 1036 KEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSC--AMHKKL 1093

Query: 749  ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
            ELG+ A   L E++P ++ +YVLL+N+YA+ G W DV   RK M +  V+K  G S V +
Sbjct: 1094 ELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVEL 1153

Query: 809  KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
            ++ V+ FV GD SHPE + IYE L E+ +++R  GY+P+T   L D+E E KE  ++YHS
Sbjct: 1154 RNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNYHS 1213

Query: 869  EKIAVAFVLTRN-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGK 927
            E++A+AF L ++   +PIRI+KNLR+CGDCH AF  ISK+  REI++RD +RFHHF  G 
Sbjct: 1214 ERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFHHFQGGA 1273

Query: 928  CSCGDYW 934
            CSC DYW
Sbjct: 1274 CSCKDYW 1280



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 139/300 (46%), Gaps = 13/300 (4%)

Query: 349  RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
            RR   +    +    + +CA L  +  G+ +H E  K G  + V V N+L+ LY   G  
Sbjct: 796  RRRLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLF 855

Query: 409  SRCLKVFFLMPEHDQ--VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
                KVF  MP   +  VSWNS++ +FA +    +E +  + +M    ++P+G T +++L
Sbjct: 856  ESAHKVFDEMPVRGRNLVSWNSMLNSFA-ANGRPNEVLTVFWEMLGVDFAPDGFTIVSVL 914

Query: 467  AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
             A + F    LG +VH  V K  +   + + NAL+  Y KCG ++D  +IF  M   R  
Sbjct: 915  TACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTV 974

Query: 527  VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV--- 583
            VSW S+I G   N    +A+ L   M +        T   VL AC+    ++ G      
Sbjct: 975  VSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDR 1034

Query: 584  --HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARH 640
                 G+   +E    +G  +VD+  + GR++ A  +   MP+  N   W +++   A H
Sbjct: 1035 MKEDYGISPRIEH---LG-CMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMH 1090



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 107/205 (52%), Gaps = 10/205 (4%)

Query: 2    KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVS 59
            ++ +  H +  K+GF   VF+ N+L+++Y   G   SA K+FDEMP   RN VSW  +++
Sbjct: 821  REGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLN 880

Query: 60   GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
             +   G  NE   +F EM+   F  + + + SVL AC E G      G +VH  V K   
Sbjct: 881  SFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFG--ALALGRRVHVYVEKVGL 938

Query: 120  TFDGLVSNVLIAMYGSCLESTDCARRIFEEIET-RDLISWNSIISVYSQRGDTISVFKLF 178
              +  VSN LI +Y  C  S + ARRIFEE+   R ++SW S+I   +  G      +LF
Sbjct: 939  VENSHVSNALIDLYAKC-GSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELF 997

Query: 179  SRMQREGFRYSLKPNEYTFGSLITA 203
            S M+RE     L P E T   ++ A
Sbjct: 998  SLMERE----KLVPTEITMVGVLYA 1018



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 6/274 (2%)

Query: 273  RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI--GKDSVSWNTMIS 330
            R+G+ +H    ++G   +V V N LV++Y  CG  + +  VF  M   G++ VSWN+M++
Sbjct: 821  REGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLN 880

Query: 331  GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
                NG   E +  F  M         F+++S L++CA  G + LG+++H    K+GL  
Sbjct: 881  SFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVE 940

Query: 391  DVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
            +  VSNAL+ LYA  G ++   ++F  M      VSW S+I   A +     EA++ +  
Sbjct: 941  NSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLA-ANGFGKEALELFSL 999

Query: 450  MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCG 508
            M R    P  +T + +L A S   +   G +   ++ + Y ++        ++   G+ G
Sbjct: 1000 MEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAG 1059

Query: 509  EMDDCEKIFARMSERRDEVSWNSMI-SGYIHNEL 541
             +++       M    + V W +++ S  +H +L
Sbjct: 1060 RVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKL 1093



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 139/300 (46%), Gaps = 31/300 (10%)

Query: 124  LVSNVLIAMYGSC--LESTDCARRIFEEIETR--DLISWNSIISVYSQRGDTISVFKLFS 179
             V N L+ +YG+C   ES   A ++F+E+  R  +L+SWNS+++ ++  G    V  +F 
Sbjct: 840  FVQNSLVHLYGACGLFES---AHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFW 896

Query: 180  RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
             M    F     P+ +T  S++TA   +      L +++   V+K GL+ + +V +AL+ 
Sbjct: 897  EMLGVDF----APDGFTIVSVLTAC--AEFGALALGRRVHVYVEKVGLVENSHVSNALID 950

Query: 240  GFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGR------RKGKEVHGYLIRSGLFDMVA 292
             +A+ G+   AR+IFE+M + + VVS   L+ G       ++  E+   + R  L     
Sbjct: 951  LYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEI 1010

Query: 293  VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT-----MISGLDQNGCYEEAIMNFCA 347
               G++   + CG +DD    F  M     +S        M+  L + G  EEA      
Sbjct: 1011 TMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIIT 1070

Query: 348  MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAG 406
            M    L  +     + L SCA    + LG ++  E L + LD   S    LLS LYA  G
Sbjct: 1071 M---PLEPNAVVWRTLLGSCAMHKKLELG-KVAWERL-VELDPGHSGDYVLLSNLYAAVG 1125



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 3/102 (2%)

Query: 8    HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP-DRNSVSWACIVSGYTHKGM 66
            H+ + K G   +  + N LI++Y + G +  A ++F+EM   R  VSW  ++ G    G 
Sbjct: 930  HVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGF 989

Query: 67   SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKF 106
              EA ++F  M R   +     +  VL AC  CG    GF++
Sbjct: 990  GKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRY 1031


>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Vitis vinifera]
          Length = 594

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/560 (39%), Positives = 347/560 (61%), Gaps = 5/560 (0%)

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G   H + +++GL +D   SN L+++Y+  G +    K+F  MP    VSWN+++G+   
Sbjct: 39  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 98

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           +     +A+  ++ M++ G S +  T  +++ A ++        Q+H   +K  + +   
Sbjct: 99  N-GDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVF 157

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           +  ALL  Y KCG + D   +F  M ER D V+W+SM++GY+ NEL  +A+ L       
Sbjct: 158 VGTALLDVYAKCGLVKDANLVFECMPERSD-VTWSSMVAGYVQNELYEEALVLFHRAQAM 216

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G   + FT ++ LSACA+ A L  G +V A   +  +  ++ + S+L+DMY+KCG I+ A
Sbjct: 217 GLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEA 276

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
              F  +  +NV  WN+++SG++RH    +A+  F +M+  G  P+ +T++ VLSACSH 
Sbjct: 277 YTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHL 336

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           GLV++G K+F  M +V+ + P +  +SCMVD+LGRAG L + ++FI++MP    + +W +
Sbjct: 337 GLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGS 396

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           +L +C     R  EL   AA  LFE+EP NA N+VLL+N+YA+  +WE+VA+AR  +KE+
Sbjct: 397 LLASC--RIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKES 454

Query: 796 EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
           + KKE G SW+ +K  VH F+ G+ +HP    IY KL++L  +M+  GY  +T+  L D+
Sbjct: 455 KAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDV 514

Query: 856 EPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
           E   K++L+ +HSEK+A+ F ++      PIRIMKNLR+CGDCHS  K  S I  REI++
Sbjct: 515 EESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIV 574

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RD+NRFHHF +G CSCG++W
Sbjct: 575 RDTNRFHHFKNGYCSCGEFW 594



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 193/364 (53%), Gaps = 4/364 (1%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +G   H  +IR GL       N L+NMY+KCG ++ +R +F  M  +  VSWNTM+    
Sbjct: 38  EGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHT 97

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           QNG  E+A++ F  M+++G   S F++ S + +CA+   +   +Q+HG  LK  LDS+V 
Sbjct: 98  QNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVF 157

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V  ALL +YA  G +     VF  MPE   V+W+S++  +  +E L  EA+  +   +  
Sbjct: 158 VGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNE-LYEEALVLFHRAQAM 216

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G   N  T  + L+A ++ +    G QV A   K  + +   + ++L+  Y KCG +++ 
Sbjct: 217 GLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEA 276

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
             +F+ + E ++ V WN+++SG+  +    +AM     M Q G   +  T+ +VLSAC+ 
Sbjct: 277 YTVFSSV-EEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSH 335

Query: 574 VATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WN 631
           +  +E+G +     +R   +  +V+  S +VD+  + G +  A  F D MP     S W 
Sbjct: 336 LGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWG 395

Query: 632 SMIS 635
           S+++
Sbjct: 396 SLLA 399



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 191/407 (46%), Gaps = 53/407 (13%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           GM  H  +++     D + SN+L+ MY  C    + AR++F+E+  R L+SWN+++  ++
Sbjct: 39  GMACHAQIIRVGLRADTITSNMLMNMYSKC-GLVESARKLFDEMPVRSLVSWNTMVGSHT 97

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
           Q GD      LF +MQ+EG   S    E+T  S++ A  +      +  +Q+     K  
Sbjct: 98  QNGDCEKALVLFMQMQKEGTSCS----EFTVSSVVCACAAKCC--VFECKQLHGFALKTA 151

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------ 274
           L S+++VG+AL+  +A+ G    A  +FE M +++ V+ + ++ G  +            
Sbjct: 152 LDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFH 211

Query: 275 -----------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
                                        GK+V     ++G+   + V + L++MYAKCG
Sbjct: 212 RAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCG 271

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            I+++ +VF  +  K+ V WN ++SG  ++    EA++ F  M++ G+  ++ + IS LS
Sbjct: 272 IIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLS 331

Query: 366 SCASLGWIMLGQQIHGEGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
           +C+ LG +  G++     +++  +  +V   + ++ +   AG L         MP     
Sbjct: 332 ACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATA 391

Query: 425 S-WNSVIGA--FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
           S W S++ +     +  L   A K+  ++     + N V   NI AA
Sbjct: 392 SMWGSLLASCRIYRNLELAEVAAKHLFEIEPHN-AGNHVLLSNIYAA 437



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 167/348 (47%), Gaps = 26/348 (7%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H QI++ G   D    N L+N+Y + G + SA KLFDEMP R+ VSW  +V  +T  G  
Sbjct: 43  HAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDC 102

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRAC-QECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            +A  +F +M + G   + + + SV+ AC  +C     K   Q+H   LK+    +  V 
Sbjct: 103 EKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECK---QLHGFALKTALDSNVFVG 159

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
             L+ +Y  C    D A  +FE +  R  ++W+S+++ Y Q         LF R Q  G 
Sbjct: 160 TALLDVYAKCGLVKD-ANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMG- 217

Query: 187 RYSLKPNEYTF--GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
              L+ N++T        AA ++++ G    +Q+ A+  K G+ S+++V S+L+  +A+ 
Sbjct: 218 ---LEHNQFTISSALSACAARAALIEG----KQVQAVSCKTGIGSNIFVISSLIDMYAKC 270

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNGL--VNMY 301
           G    A  +F  + +KNVV  N ++ G  R  + +   +    +  M    N +  +++ 
Sbjct: 271 GIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVL 330

Query: 302 AKC---GTIDDSRSVFRFMIGKDSVSWNT-----MISGLDQNGCYEEA 341
           + C   G ++  R  F  MI   +VS N      M+  L + G   EA
Sbjct: 331 SACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEA 378



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 7/201 (3%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H   LK     +VF+   L++VY + G +  A+ +F+ MP+R+ V+W+ +V+GY 
Sbjct: 139 ECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYV 198

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
              +  EA  +F      G   N++ + S L AC     +    G QV  +  K+    +
Sbjct: 199 QNELYEEALVLFHRAQAMGLEHNQFTISSALSACAA--RAALIEGKQVQAVSCKTGIGSN 256

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V + LI MY  C    + A  +F  +E ++++ WN+I+S +S+   ++     F +MQ
Sbjct: 257 IFVISSLIDMYAKC-GIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQ 315

Query: 183 REGFRYSLKPNEYTFGSLITA 203
           + G    + PN+ T+ S+++A
Sbjct: 316 QMG----ICPNDITYISVLSA 332


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 247/786 (31%), Positives = 410/786 (52%), Gaps = 75/786 (9%)

Query: 220  AMVKKAGLLSDLYVGSALVSGF-ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---- 274
            AMV   GL  +    ++ V  F +  G+ +   ++F+++  K VV  + +     K    
Sbjct: 627  AMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTR 686

Query: 275  ------GKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
                  G E+HG LI+ G FD+ V +   L+N Y +C  ++ +  VF  M   +++ WN 
Sbjct: 687  VMDIWLGMEIHGCLIKRG-FDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNE 745

Query: 328  MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
             I    Q+   ++ +  F  M+   L +   +++  L +C  +G +   +QIHG   + G
Sbjct: 746  AIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFG 805

Query: 388  LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA------DSEALV- 440
            LDSDVS+ N L+S+Y+  G L    +VF  M   +  SWNS+I ++A      D+ +L  
Sbjct: 806  LDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFY 865

Query: 441  ---------------------------SEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
                                        E +     M+  G+ PN  +  ++L A S   
Sbjct: 866  ELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELG 925

Query: 474  MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
               +G + H  V++     +  +  +L+  Y K   +   + +F  M + R+  +WNS++
Sbjct: 926  FLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNM-KNRNIFAWNSLV 984

Query: 534  SGYIHNELLPKAMNLVWFMMQRGQRLDHFTF------------------------ATVLS 569
            SGY    +   A+ L+  M + G + D  T+                          +L 
Sbjct: 985  SGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLR 1044

Query: 570  ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
            ACAS++ L++G E+H   +R     DV + +AL+DMYSK   +  A + F  +  + + S
Sbjct: 1045 ACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLAS 1104

Query: 630  WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
            WN MI G+A  G G +A+++F++M+  G  PD +TF  +LSAC ++GL+ EG+K+F SM 
Sbjct: 1105 WNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMI 1164

Query: 690  QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
              Y ++P+LE + CMVDLLGRAG LD+  + I+ MP+ P++ IW  +LG+ CR + +   
Sbjct: 1165 TDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGS-CRIH-KNLX 1222

Query: 750  LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMK 809
                AA  LF++EP N+ NY+L+ N+Y+   +WED+   R+ M  A V+     SW+ + 
Sbjct: 1223 FAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQIN 1282

Query: 810  DGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSE 869
              VHVF + ++ HP+   IY +L +L  +M+  GYVP       +++   K+ ++  H+E
Sbjct: 1283 QRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTE 1342

Query: 870  KIAVAFVLTR-NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKC 928
            K+A+ + L +  +  PIR++KN R+C DCHSA K+IS +  RE+ LRD  RFHHF +GKC
Sbjct: 1343 KLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKC 1402

Query: 929  SCGDYW 934
            SC D+W
Sbjct: 1403 SCNDFW 1408



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 151/574 (26%), Positives = 252/574 (43%), Gaps = 89/574 (15%)

Query: 8    HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSW--ACIVSGYTHKG 65
            H  ++K GF  DV+L   L+N Y R   L  A+++F EMP+  ++ W  A I++  + K 
Sbjct: 697  HGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEK- 755

Query: 66   MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSG-FKFGMQVHCLVLKSNQTFDGL 124
               +  ++F++M    F   +    +++R  Q CG  G      Q+H  V +     D  
Sbjct: 756  -LQKGVELFRKM---QFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVS 811

Query: 125  VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG--------------- 169
            + N LI+MY S     + ARR+F+ +E R+  SWNS+IS Y+  G               
Sbjct: 812  LCNPLISMY-SKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESS 870

Query: 170  ----DTIS----------------VFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
                D ++                V  +  RMQ EGF    KPN  +  S++ A   S L
Sbjct: 871  DMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGF----KPNSSSMTSVLQAI--SEL 924

Query: 210  SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
                + ++    V + G   D+YVG++L+  + +  +   A+ +F+ M  +N+ + N L 
Sbjct: 925  GFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSL- 983

Query: 270  EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
                    V GY  +    D +     L+N   K G            I  D V+WN MI
Sbjct: 984  --------VSGYSFKGMFEDALR----LLNQMEKEG------------IKPDLVTWNGMI 1019

Query: 330  SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
            SG    GC            R   M ++ S+   L +CASL  +  G++IH   ++ G  
Sbjct: 1020 SGYAMWGCA-----------RKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFI 1068

Query: 390  SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
             DV V+ AL+ +Y+ +  L    KVF  +      SWN +I  FA    L  EA+  + +
Sbjct: 1069 EDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIF-GLGKEAISVFNE 1127

Query: 450  MRRAGWSPNGVTFINILAA-ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            M++ G  P+ +TF  +L+A  +S  +G+      + +  Y +         ++   G+ G
Sbjct: 1128 MQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAG 1187

Query: 509  EMDDCEKIFARMSERRDEVSWNSMI-SGYIHNEL 541
             +D+   +   M  + D   W +++ S  IH  L
Sbjct: 1188 YLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNL 1221



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 150/651 (23%), Positives = 276/651 (42%), Gaps = 87/651 (13%)

Query: 23   CNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY-THKGMSNEACKMFKEMVRAG 81
               LI+ Y+  GD  SA+ +F     RN + W   V  + +  G  +   ++FKE+   G
Sbjct: 610  AKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKG 669

Query: 82   FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD 141
             + +       L+ C          GM++H  ++K     D  +   L+  YG C    +
Sbjct: 670  VVFDSEVYSVALKTCTRV--MDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCW-GLE 726

Query: 142  CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
             A ++F E+   + + WN  I +  Q        +LF +MQ            ++F    
Sbjct: 727  KANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQ------------FSFLKAE 774

Query: 202  TAAYSSVLSGSYLL------QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
            TA    VL     +      +QI   V + GL SD+ + + L+S +++ G    AR++F+
Sbjct: 775  TATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFD 834

Query: 256  QMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
             M  +N  S                              N +++ YA  G ++D+ S+F 
Sbjct: 835  SMENRNTSSW-----------------------------NSMISSYAALGFLNDAWSLFY 865

Query: 316  FM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
             +    +  D V+WN ++SG   +G  EE +     M+ +G   ++ S+ S L + + LG
Sbjct: 866  ELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELG 925

Query: 372  WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI- 430
            ++ +G++ HG  L+ G D DV V  +L+ +Y     L     VF  M   +  +WNS++ 
Sbjct: 926  FLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVS 985

Query: 431  -----GAFADSEALVSEAVKYYLDMRRAGWS-----------------PNGVTFINILAA 468
                 G F D+  L+++  K  +      W+                 PN  +   +L A
Sbjct: 986  GYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRA 1045

Query: 469  ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
             +S S+ + G ++H   I+     +  +  AL+  Y K   + +  K+F R+ + +   S
Sbjct: 1046 CASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRI-QNKTLAS 1104

Query: 529  WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
            WN MI G+    L  +A+++   M + G   D  TF  +LSAC +   +  G +     +
Sbjct: 1105 WNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMI 1164

Query: 589  RACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMI 634
                ++ +V        +VD+  + G +D A      MP++ +   W +++
Sbjct: 1165 ---TDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALL 1212



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 203/479 (42%), Gaps = 108/479 (22%)

Query: 4    AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            AK  H  + + G   DV LCN LI++Y + G L  A ++FD M +RN+ SW  ++S Y  
Sbjct: 794  AKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAA 853

Query: 64   KGMSNEACKMFKE-----------------------------------MVRAGFLLNRYA 88
             G  N+A  +F E                                   M   GF  N  +
Sbjct: 854  LGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSS 913

Query: 89   LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFE 148
            + SVL+A  E G      G + H  VL++    D  V   LI MY     S   A+ +F+
Sbjct: 914  MTSVLQAISELG--FLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKN-HSLXSAQAVFD 970

Query: 149  EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
             ++ R++ +WNS++S YS +G      +L ++M++EG    +KP                
Sbjct: 971  NMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEG----IKP---------------- 1010

Query: 209  LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
                                 DL   + ++SG+A  G    ARK F      N  S+  L
Sbjct: 1011 ---------------------DLVTWNGMISGYAMWG---CARKAF----MPNSASITCL 1042

Query: 269  MEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
            +         +KGKE+H   IR+G  + V V   L++MY+K  ++ ++  VFR +  K  
Sbjct: 1043 LRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTL 1102

Query: 323  VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
             SWN MI G    G  +EAI  F  M++ G+     +  + LS+C + G I       GE
Sbjct: 1103 ASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLI-------GE 1155

Query: 383  GLKL--GLDSDVSVSNAL------LSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            G K    + +D  +   L      + L   AGYL     +   MP + D   W +++G+
Sbjct: 1156 GWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGS 1214



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 161/364 (44%), Gaps = 9/364 (2%)

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G +S+   +    ++C  LG +++ +      L    + D +  N L+S Y   G     
Sbjct: 574 GAISAGVDVFRFNTTCGMLGALVMIK------LPQKWNPDAAAKN-LISSYLGFGDFWSA 626

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
             VF++    + + WNS +  F  S   +   ++ + ++   G   +   +   L   + 
Sbjct: 627 AMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTR 686

Query: 472 FSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
                LG ++H  +IK     +  +  AL++ YG+C  ++   ++F  M    + + WN 
Sbjct: 687 VMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNP-EALLWNE 745

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC 591
            I   + +E L K + L   M     + +  T   VL AC  +  L    ++H    R  
Sbjct: 746 AIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFG 805

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
           L+ DV + + L+ MYSK G+++ A R FD M  RN  SWNSMIS YA  G  + A +LF 
Sbjct: 806 LDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFY 865

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRA 711
           +++     PD VT+  +LS     G  +E     + M Q  G  P     + ++  +   
Sbjct: 866 ELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRM-QGEGFKPNSSSMTSVLQAISEL 924

Query: 712 GELD 715
           G L+
Sbjct: 925 GFLN 928


>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
          Length = 677

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/612 (37%), Positives = 356/612 (58%), Gaps = 12/612 (1%)

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLM-SSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           WN ++S   + G    A+  F A+       S+ F+L  TL++CA LG +   + +    
Sbjct: 76  WNGLLSAHSRAGAPGAALRVFRALPSSARPNSTTFTL--TLTACARLGDLDAAESVRVRA 133

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
              G   DV V +ALL LY+  G +   ++VF  MP  D+V+W++++  F  +   V EA
Sbjct: 134 FAAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPV-EA 192

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           +  Y  MR  G S + V  + ++ A  S    ++G  VH +++++ +  +     +L+S 
Sbjct: 193 LAMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSM 252

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           Y K G +D   ++F RM   R++V+W+++ISG+  N    +A++L   +   G +   + 
Sbjct: 253 YAKNGHLDVACQVF-RMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWA 311

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
             + L ACASV  L+ G  +H   +R  LE+  ++G+A++DMYSKCG ++ A + F+ + 
Sbjct: 312 LVSALLACASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKLFNKLS 370

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            R++  WN++I+    HG G  AL LF ++   G  PDH TF  +LSA SH+GLV+EG  
Sbjct: 371 SRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKF 430

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
            F  M + +G+ P  + + C+VDLL R+G +++  + +  M   P   IW  +L  C   
Sbjct: 431 WFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCL-- 488

Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
           N +K ELG   A  + E+ P++     L++N+YA+  KW+ V + RK MK++  KK  G 
Sbjct: 489 NNKKLELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGY 548

Query: 804 SWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDL 863
           S + +K   H FV  D+SHP+   I + + +LN +MR  GYVP+T+F   DL+   ++ L
Sbjct: 549 SLIEVKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTEFVYHDLD---EDQL 605

Query: 864 VSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHH 922
           +SYHSE++A+AF L   S    + I+KNLRVCGDCH A K+ISKIV REIV+RD+ RFHH
Sbjct: 606 LSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHH 665

Query: 923 FNDGKCSCGDYW 934
           F DG CSCGDYW
Sbjct: 666 FKDGACSCGDYW 677



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 180/352 (51%), Gaps = 13/352 (3%)

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           V V + L+++Y++CG ++++  VF  M  KD V+W+TM++G    G   EA+  +  MR 
Sbjct: 142 VFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMRE 201

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
            G+      ++  + +C S G   +G  +HG  L+  +  DV  + +L+S+YA  G+L  
Sbjct: 202 HGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDV 261

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
             +VF +MP  + V+W+++I  FA +   V EA+  + +++  G  P     ++ L A +
Sbjct: 262 ACQVFRMMPYRNDVTWSALISGFAQNGRAV-EALDLFRELQADGLQPCSWALVSALLACA 320

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
           S    KLG  +H  +++  +  +  +  A+L  Y KCG ++   K+F ++S  RD V WN
Sbjct: 321 SVGFLKLGKSIHGFILR-RLEWQCILGTAVLDMYSKCGSLESARKLFNKLSS-RDLVLWN 378

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG-----MEVHA 585
           ++I+    +     A+ L   + + G + DH TFA++LSA +    +E G       +  
Sbjct: 379 AIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMIKE 438

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISG 636
            G+    +  V I    VD+ ++ G ++ A+     M     +  W  ++SG
Sbjct: 439 FGIEPAEKHYVCI----VDLLARSGLVEEANDMLASMQTEPTIAIWVILLSG 486



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 197/432 (45%), Gaps = 61/432 (14%)

Query: 158 WNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ 217
           WN ++S +S+ G   +  ++F          S +PN  TF   +TA   + L      + 
Sbjct: 76  WNGLLSAHSRAGAPGAALRVF-----RALPSSARPNSTTFTLTLTAC--ARLGDLDAAES 128

Query: 218 ILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG------ 271
           +      AG   D++V SAL+  ++R G    A ++F+ M +K+ V+ + ++ G      
Sbjct: 129 VRVRAFAAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGR 188

Query: 272 -----------------------------------RRKGKEVHGYLIRSGLFDMVAVGNG 296
                                               R G  VHG L+R  +   V     
Sbjct: 189 PVEALAMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTS 248

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           LV+MYAK G +D +  VFR M  ++ V+W+ +ISG  QNG   EA+  F  ++ DGL   
Sbjct: 249 LVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPC 308

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
           +++L+S L +CAS+G++ LG+ IHG  L+  L+    +  A+L +Y+  G L    K+F 
Sbjct: 309 SWALVSALLACASVGFLKLGKSIHGFILR-RLEWQCILGTAVLDMYSKCGSLESARKLFN 367

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            +   D V WN++I A   +     +A+  + ++   G  P+  TF ++L+A S   + +
Sbjct: 368 KLSSRDLVLWNAII-ACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVE 426

Query: 477 LGHQVHAQVIKYNVANETTIENA------LLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
            G     ++IK     E  IE A      ++    + G +++   + A M        W 
Sbjct: 427 EGKFWFDRMIK-----EFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWV 481

Query: 531 SMISGYIHNELL 542
            ++SG ++N+ L
Sbjct: 482 ILLSGCLNNKKL 493



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 108/470 (22%), Positives = 215/470 (45%), Gaps = 40/470 (8%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G+ +DVF+C+ L+++Y R G +  A ++FD MP ++ V+W+ +V+G+   G   EA  M+
Sbjct: 137 GYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALAMY 196

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
             M   G   +   +  V++AC   G +  + G  VH  +L+     D + +  L++MY 
Sbjct: 197 SRMREHGVSDDEVVMVGVIQACMSTGNA--RIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
                 D A ++F  +  R+ ++W+++IS ++Q G  +    LF  +Q +G    L+P  
Sbjct: 255 KN-GHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADG----LQPCS 309

Query: 195 YTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
           +   +L++A  +    G   L + +       L     +G+A++  +++ G+   ARK+F
Sbjct: 310 W---ALVSALLACASVGFLKLGKSIHGFILRRLEWQCILGTAVLDMYSKCGSLESARKLF 366

Query: 255 EQMIQKNVVSMNGLMEGRRKGKEVHGYLI------RSGLFDMVAVGNGLVNMYAKCGTID 308
            ++  +++V  N ++         H  L        +G+    A    L++  +  G ++
Sbjct: 367 NKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVE 426

Query: 309 DSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
           + +  F  MI +  +      +  ++  L ++G  EEA     +M+ +  ++    L   
Sbjct: 427 EGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVIL--- 483

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE--H 421
           LS C +   + LG+ I  + L+L  + D+ V   + +LYA A    +  ++  LM +   
Sbjct: 484 LSGCLNNKKLELGETIAKKILELRPE-DIGVLALVSNLYAAAKKWDKVREIRKLMKDSGS 542

Query: 422 DQVSWNSVIGAFADSEALVSE-------------AVKYYLDMRRAGWSPN 458
            +V   S+I       A V E               K   +MR+ G+ P 
Sbjct: 543 KKVPGYSLIEVKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPR 592



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 154/325 (47%), Gaps = 21/325 (6%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H ++L+H    DV    +L+++Y + G L  A ++F  MP RN V+W+ ++SG+   G +
Sbjct: 231 HGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRA 290

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA  +F+E+   G     +AL S L AC   G    K G  +H  +L+  + +  ++  
Sbjct: 291 VEALDLFRELQADGLQPCSWALVSALLACASVG--FLKLGKSIHGFILRRLE-WQCILGT 347

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            ++ MY  C  S + AR++F ++ +RDL+ WN+II+     G       LF  +   G  
Sbjct: 348 AVLDMYSKC-GSLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNETG-- 404

Query: 188 YSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
             +KP+  TF SL++A   S  V  G +   +   M+K+ G+         +V   AR G
Sbjct: 405 --IKPDHATFASLLSALSHSGLVEEGKFWFDR---MIKEFGIEPAEKHYVCIVDLLARSG 459

Query: 246 NFYYARKIFEQMIQKNVVSM-NGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNGLV----N 299
               A  +   M  +  +++   L+ G    K++  G  I   + ++     G++    N
Sbjct: 460 LVEEANDMLASMQTEPTIAIWVILLSGCLNNKKLELGETIAKKILELRPEDIGVLALVSN 519

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVS 324
           +YA     D  R + + M  KDS S
Sbjct: 520 LYAAAKKWDKVREIRKLM--KDSGS 542


>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1134

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/648 (35%), Positives = 370/648 (57%), Gaps = 13/648 (2%)

Query: 295  NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
            N L++MY KC     +  VF  M  ++ VSW  ++SG   NG    ++  F  M R G+ 
Sbjct: 408  NYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIY 467

Query: 355  SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
             + F+  + L +C  L  +  G QIHG  LK+G +  V V N+L+ +Y+  G ++   KV
Sbjct: 468  PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKV 527

Query: 415  FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS--PNGVTFINILAAASSF 472
            F  M     +SWN++I  +  +    S A+  +  M+ A     P+  T  ++L A SS 
Sbjct: 528  FRWMVGRSLISWNAMIAGYVHA-GYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSST 586

Query: 473  SMGKLGHQVHAQVIK--YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
             M   G Q+H  +++  ++  +  TI  +L+  Y KCG +    K F ++ E+   +SW+
Sbjct: 587  GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEK-TMISWS 645

Query: 531  SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
            S+I GY       +AM L   + +   ++D F  ++++   A  A L++G ++ A  V+ 
Sbjct: 646  SLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKL 705

Query: 591  CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
                +  + ++LVDMY KCG +D A + F  M +++V SW  MI+GY +HG G KA+++F
Sbjct: 706  PSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIF 765

Query: 651  SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
            ++M      PD V ++ VLSACSH+G++ EG + F  + +  G+ P++E ++C+VDLLGR
Sbjct: 766  NKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGR 825

Query: 711  AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
            AG L + +  ++ MPI PN  IW+T+L + CR +    ELG++   +L  ++ +N  NYV
Sbjct: 826  AGRLKEAKHLVDTMPIKPNVGIWQTLL-SLCRVH-GDIELGKEVGKILLRIDGKNPANYV 883

Query: 771  LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
            +++N+Y   G W +   AR+      ++KEAG SWV ++  VH F +G++SHP   +I E
Sbjct: 884  MMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLTLVIQE 943

Query: 831  KLKELNQKMRDA-GYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR---NSK-LPI 885
             LKE+ +++R+  GYV   K  L D++ ESKE+ +  HSEK+A+   L     N K   I
Sbjct: 944  TLKEVERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTI 1003

Query: 886  RIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
            R+ KNLRVC DCH   K +SKI     V+RD+ RFH F DG CSCGDY
Sbjct: 1004 RVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/427 (30%), Positives = 221/427 (51%), Gaps = 26/427 (6%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNV------VSMN----GLMEGRRKGKEVHGYLIR 284
           +AL+SG    G+   +  +F +M ++ +       S N    GL+    KG ++HG+ ++
Sbjct: 439 TALMSGHVLNGDLNGSLSLFTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLK 498

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
            G   MV VGN LV+MY+KCG I+++  VFR+M+G+  +SWN MI+G    G    A+  
Sbjct: 499 IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALAT 558

Query: 345 FCAMRRDGLM--SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL--DSDVSVSNALLS 400
           F  M+   +      F+L S L +C+S G I  G+QIHG  ++ G    S  +++ +L+ 
Sbjct: 559 FGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVD 618

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           LY   G L    K F  + E   +SW+S+I  +A     V EA+  +  ++      +  
Sbjct: 619 LYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGDFV-EAMGLFKRLQELSSQIDSF 677

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
              +I+   + F++ + G Q+ A V+K     ET++ N+L+  Y KCG +D+ EK FA M
Sbjct: 678 VLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEM 737

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
            + +D +SW  MI+GY  + L  KA+++   M++     D   +  VLSAC+    ++ G
Sbjct: 738 -QLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEG 796

Query: 581 ME-----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMI 634
            E     +   G++  +E    +    VD+  + GR+  A    D MP++ NV  W +++
Sbjct: 797 EELFSKLLETQGIKPRVEHYACV----VDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLL 852

Query: 635 SGYARHG 641
           S    HG
Sbjct: 853 SLCRVHG 859



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 212/463 (45%), Gaps = 56/463 (12%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G   ++   N LI++Y +  +   A K+FD MP+RN VSW  ++SG+   G  N +  +F
Sbjct: 399 GSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLF 458

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
            EM R G   N +   + L+AC     +  + G+Q+H   LK        V N L+ MY 
Sbjct: 459 TEMGRQGIYPNEFTFSTNLKACGLL--NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYS 516

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
            C    + A ++F  +  R LISWN++I+ Y   G        F  MQ    +   +P+E
Sbjct: 517 KCGRINE-AEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKE--RPDE 573

Query: 195 YTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL--LSDLYVGSALVSGFARLGNFYYARK 252
           +T  SL+ A  S+ +   Y  +QI   + ++G    S   +  +LV  + + GN + ARK
Sbjct: 574 FTLTSLLKACSSTGM--IYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARK 631

Query: 253 IFEQMIQKNVVSMNGLMEGR---------------------------------------- 272
            F+Q+ +K ++S + L+ G                                         
Sbjct: 632 AFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFAL 691

Query: 273 -RKGKEVHGYLIR--SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
            ++GK++   +++  SGL    +V N LV+MY KCG +D++   F  M  KD +SW  MI
Sbjct: 692 LQQGKQMQALVVKLPSGL--ETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMI 749

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GL 388
           +G  ++G  ++A+  F  M R  +       ++ LS+C+  G I  G+++  + L+  G+
Sbjct: 750 TGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGI 809

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVI 430
              V     ++ L   AG L     +   MP    V  W +++
Sbjct: 810 KPRVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLL 852



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 211/458 (46%), Gaps = 37/458 (8%)

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ---QIHGEGLKLGLDSDVSVS 395
           + A +  C+  +  L S        L +C  L +I+      ++ G GL L        S
Sbjct: 354 QTATLCLCSFCQHLLHSPTEEDSHVLENCYVLEFIIFTNSNFRLSGSGLNL------ITS 407

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           N L+ +Y          KVF  MPE + VSW +++     +  L + ++  + +M R G 
Sbjct: 408 NYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDL-NGSLSLFTEMGRQGI 466

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            PN  TF   L A    +  + G Q+H   +K        + N+L+  Y KCG +++ EK
Sbjct: 467 YPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEK 526

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG---QRLDHFTFATVLSACA 572
           +F R    R  +SWN+MI+GY+H     +A+   + MMQ     +R D FT  ++L AC+
Sbjct: 527 VF-RWMVGRSLISWNAMIAGYVHAGYGSRAL-ATFGMMQEAKIKERPDEFTLTSLLKACS 584

Query: 573 SVATLERGMEVHACGVRA---CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           S   +  G ++H   VR+   C     + GS LVD+Y KCG +  A + FD +  + + S
Sbjct: 585 STGMIYAGKQIHGFLVRSGFHCPSSATITGS-LVDLYVKCGNLFSARKAFDQIKEKTMIS 643

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           W+S+I GYA+ G   +A+ LF +++      D      ++   +   L+ +G    K M 
Sbjct: 644 WSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQG----KQMQ 699

Query: 690 QVYGLIPQLEQFSC---MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
            +   +P   + S    +VD+  + G +D+ E+   +M +  + + W  ++         
Sbjct: 700 ALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVMI-----TGYG 753

Query: 747 KTELGRKAANMLFEM-----EPQNAVNYVLLANMYASG 779
           K  LG+KA ++  +M     EP       +L+    SG
Sbjct: 754 KHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSG 791



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 191/416 (45%), Gaps = 38/416 (9%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           LK GF   V + N+L+++Y + G +  A K+F  M  R+ +SW  +++GY H G  + A 
Sbjct: 497 LKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRAL 556

Query: 72  KMFKEMVRAGF--LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS--NQTFDGLVSN 127
             F  M  A      + + L S+L+AC   G      G Q+H  +++S  +      ++ 
Sbjct: 557 ATFGMMQEAKIKERPDEFTLTSLLKACSSTGM--IYAGKQIHGFLVRSGFHCPSSATITG 614

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ +Y  C  +   AR+ F++I+ + +ISW+S+I  Y+Q GD +    LF R+Q     
Sbjct: 615 SLVDLYVKC-GNLFSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQ----E 669

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQ---QILAMVKKAGLLSDLYVGSALVSGFARL 244
            S + + +   S+I      V +   LLQ   Q+ A+V K     +  V ++LV  + + 
Sbjct: 670 LSSQIDSFVLSSII-----GVFADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKC 724

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGR------RKGKEVHGYLIRSGLFDMVAVGNGLV 298
           G    A K F +M  K+V+S   ++ G       +K   +   ++R  +         ++
Sbjct: 725 GLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVL 784

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
           +  +  G I +   +F  ++    +      +  ++  L + G  +EA      M     
Sbjct: 785 SACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMP---- 840

Query: 354 MSSNFSLIST-LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGY 407
           +  N  +  T LS C   G I LG+++ G+ L L +D     +  ++S LY  AGY
Sbjct: 841 IKPNVGIWQTLLSLCRVHGDIELGKEV-GKIL-LRIDGKNPANYVMMSNLYGQAGY 894



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 143/292 (48%), Gaps = 21/292 (7%)

Query: 4   AKLFHLQILKHGF--AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
            K  H  +++ GF       +  +L+++YV+ G+L SA K FD++ ++  +SW+ ++ GY
Sbjct: 592 GKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGY 651

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
             +G   EA  +FK +      ++ + L S++    +   +  + G Q+  LV+K     
Sbjct: 652 AQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADF--ALLQQGKQMQALVVKLPSGL 709

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  VSN L+ MY  C    D A + F E++ +D+ISW  +I+ Y + G       +F++M
Sbjct: 710 ETSVSNSLVDMYLKC-GLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKM 768

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
                R++++P+E  + ++++A   S  +  G  L  ++L   +  G+   +   + +V 
Sbjct: 769 ----LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLL---ETQGIKPRVEHYACVVD 821

Query: 240 GFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRK------GKEVHGYLIR 284
              R G    A+ + + M I+ NV     L+   R       GKEV   L+R
Sbjct: 822 LLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLR 873



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 50/99 (50%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K     ++K     +  + N+L+++Y++ G +  A K F EM  ++ +SW  +++GY
Sbjct: 693 QQGKQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGY 752

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G+  +A  +F +M+R     +     +VL AC   G
Sbjct: 753 GKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSG 791


>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/665 (34%), Positives = 356/665 (53%), Gaps = 38/665 (5%)

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G    ++ +F  +   D  + +T+IS     G   EAI  + ++R  G+   N   ++  
Sbjct: 80  GDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVA 139

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +C + G     +++H + ++ G+ SD  + NAL+  Y     +    +VF  +   D V
Sbjct: 140 KACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVV 199

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           SW S+   + +   L    +  + +M   G  PN VT  +IL A S     K G  +H  
Sbjct: 200 SWTSMSSCYVNC-GLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGF 258

Query: 485 VIKYNVANETTIENALLSCYGKC-------------------------------GEMDDC 513
            +++ +     + +AL+S Y +C                                E D  
Sbjct: 259 AVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKG 318

Query: 514 EKIFARMSER---RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
             +F++MS +    DE +WN++I G + N    KA+ ++  M   G + +  T ++ L A
Sbjct: 319 LALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPA 378

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
           C+ + +L  G EVH    R  L  D+   +ALV MY+KCG ++ +   FD++  ++V +W
Sbjct: 379 CSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAW 438

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
           N+MI   A HG+G + L LF  M   G  P+ VTF GVLS CSH+ LV+EG + F SM +
Sbjct: 439 NTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGR 498

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
            + + P    ++CMVD+  RAG L +  EFI +MP+ P +  W  +LGAC     +  EL
Sbjct: 499 DHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGAC--RVYKNVEL 556

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
            + +AN LFE+EP N  NYV L N+  +   W + ++AR  MKE  + K  GCSW+ + D
Sbjct: 557 AKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGD 616

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
            VH FV GD+++ E D IY  L EL +KM+ AGY P T + L D++ E K + +  HSEK
Sbjct: 617 RVHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEK 676

Query: 871 IAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +AVAF +L  N +  IR+ KNLR+CGDCH+A K++SK+VG  I++RDS RFHHF +G CS
Sbjct: 677 LAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCS 736

Query: 930 CGDYW 934
           C D W
Sbjct: 737 CQDLW 741



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 211/451 (46%), Gaps = 47/451 (10%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG----------KEVH 279
           D    S L+S F   G    A +++  +  + +   N +     K           KEVH
Sbjct: 96  DPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRVKEVH 155

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
              IR G+     +GN L++ Y KC  ++ +R VF  ++ KD VSW +M S     G   
Sbjct: 156 DDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPR 215

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
             +  FC M  +G+  ++ +L S L +C+ L  +  G+ IHG  ++ G+  +V V +AL+
Sbjct: 216 LGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALV 275

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA-FADSE-----ALVSE----------- 442
           SLYA    + +   VF LMP  D VSWN V+ A F + E     AL S+           
Sbjct: 276 SLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEA 335

Query: 443 -----------------AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
                            AV+    M+  G+ PN +T  + L A S     ++G +VH  V
Sbjct: 336 TWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYV 395

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
            ++ +  + T   AL+  Y KCG+++    +F  M  R+D V+WN+MI     +    + 
Sbjct: 396 FRHWLIGDLTTMTALVYMYAKCGDLNLSRNVF-DMICRKDVVAWNTMIIANAMHGNGREV 454

Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV-HACGVRACLEFDVVIGSALVD 604
           + L   M+Q G + +  TF  VLS C+    +E G+++ ++ G    +E D    + +VD
Sbjct: 455 LLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVD 514

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYS-WNSMI 634
           ++S+ GR+  A  F   MP+    S W +++
Sbjct: 515 VFSRAGRLHEAYEFIQRMPMEPTASAWGALL 545



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 126/513 (24%), Positives = 233/513 (45%), Gaps = 44/513 (8%)

Query: 26  LINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLN 85
           L+   + VGD   A +LFD +P  +  + + ++S +T +G+ NEA +++  +   G   +
Sbjct: 72  LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH 131

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
                +V +AC   G +      +VH   ++     D  + N LI  YG C +  + ARR
Sbjct: 132 NSVFLTVAKACGASGDASRV--KEVHDDAIRCGMMSDAFLGNALIHAYGKC-KCVEGARR 188

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           +F+++  +D++SW S+ S Y   G       +F  M   G    +KPN  T  S++ A  
Sbjct: 189 VFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNG----VKPNSVTLSSILPAC- 243

Query: 206 SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
            S L      + I     + G++ +++V SALVS +AR  +   AR +F+ M  ++VVS 
Sbjct: 244 -SELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSW 302

Query: 266 NGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK----D 321
           NG++      +E                              D   ++F  M  K    D
Sbjct: 303 NGVLTAYFTNRE-----------------------------YDKGLALFSQMSSKGVEAD 333

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
             +WN +I G  +NG  E+A+     M+  G   +  ++ S L +C+ L  + +G+++H 
Sbjct: 334 EATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHC 393

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
              +  L  D++   AL+ +YA  G L+    VF ++   D V+WN++I A A       
Sbjct: 394 YVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANA-MHGNGR 452

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA-L 500
           E +  +  M ++G  PN VTF  +L+  S   + + G Q+   + + ++        A +
Sbjct: 453 EVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACM 512

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           +  + + G + +  +   RM       +W +++
Sbjct: 513 VDVFSRAGRLHEAYEFIQRMPMEPTASAWGALL 545



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 149/300 (49%), Gaps = 3/300 (1%)

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           LL    + G   R  ++F  +P+ D  + +++I AF  +  L +EA++ Y  +R  G  P
Sbjct: 72  LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFT-TRGLPNEAIRLYASLRARGIKP 130

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           +   F+ +  A  +        +VH   I+  + ++  + NAL+  YGKC  ++   ++F
Sbjct: 131 HNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVF 190

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
             +  + D VSW SM S Y++  L    + +   M   G + +  T +++L AC+ +  L
Sbjct: 191 DDLVVK-DVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDL 249

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
           + G  +H   VR  +  +V + SALV +Y++C  +  A   FDLMP R+V SWN +++ Y
Sbjct: 250 KSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAY 309

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
             +   DK L LFSQM   G   D  T+  V+  C   G  ++  +  + M Q  G  P 
Sbjct: 310 FTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKM-QNLGFKPN 368



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 168/388 (43%), Gaps = 69/388 (17%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   ++ G   D FL N LI+ Y +   +  A ++FD++  ++ VSW  + S Y + 
Sbjct: 152 KEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNC 211

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G+      +F EM   G   N   L S+L AC E      K G  +H   ++     +  
Sbjct: 212 GLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSEL--KDLKSGRAIHGFAVRHGMIENVF 269

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY------------------- 165
           V + L+++Y  CL S   AR +F+ +  RD++SWN +++ Y                   
Sbjct: 270 VCSALVSLYARCL-SVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSK 328

Query: 166 ----------------SQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
                            + G T    ++  +MQ  GF    KPN+ T  S + A   S+L
Sbjct: 329 GVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGF----KPNQITISSFLPAC--SIL 382

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
               + +++   V +  L+ DL   +ALV  +A+ G+   +R +F+ + +K+VV+ N ++
Sbjct: 383 ESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMI 442

Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
                   +HG             G  ++ ++          S+ +  I  +SV++  ++
Sbjct: 443 ----IANAMHGN------------GREVLLLF---------ESMLQSGIKPNSVTFTGVL 477

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           SG   +   EE +  F +M RD L+  +
Sbjct: 478 SGCSHSRLVEEGLQIFNSMGRDHLVEPD 505



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 132/309 (42%), Gaps = 51/309 (16%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H   ++HG   +VF+C+ L+++Y R   +  A  +FD MP R+ VSW  +++ Y
Sbjct: 250 KSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAY 309

Query: 62  -----------------------------------THKGMSNEACKMFKEMVRAGFLLNR 86
                                                 G + +A +M ++M   GF  N+
Sbjct: 310 FTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQ 369

Query: 87  YALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRI 146
             + S L AC        + G +VHC V +     D      L+ MY  C +  + +R +
Sbjct: 370 ITISSFLPACSIL--ESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGD-LNLSRNV 426

Query: 147 FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS 206
           F+ I  +D+++WN++I   +  G+   V  LF  M + G    +KPN  TF  +++    
Sbjct: 427 FDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSG----IKPNSVTFTGVLSGC-- 480

Query: 207 SVLSGSYLLQQILAMVKKAG----LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
              S S L+++ L +    G    +  D    + +V  F+R G  + A +  ++M  +  
Sbjct: 481 ---SHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPT 537

Query: 263 VSMNGLMEG 271
            S  G + G
Sbjct: 538 ASAWGALLG 546


>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 240/650 (36%), Positives = 367/650 (56%), Gaps = 49/650 (7%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMI--------GKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
           L+ +Y+K G +  +R++F              +S   NTM+      G   EAI  +  M
Sbjct: 64  LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           +R G+  +NF+    L  CAS    + G+ +HG+ ++ G  SD+ V  AL+ +YA  G +
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEI 183

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
               +VF  M   D V W ++I  +  +E  + +A+  +  M+  G+  + +T I++ +A
Sbjct: 184 GDAHEVFDRMLIRDVVCWTAMITLYEQAERPL-KALMLFRKMQEEGFLGDEITAISVASA 242

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
                 G++                  I  A L              +F RM E R+ +S
Sbjct: 243 VGQLGDGRMA-----------------ISRARL--------------VFDRM-EERNGIS 270

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           WNSM+SGY  N     A++L   M       +  T   ++SAC+ + +   G ++H   +
Sbjct: 271 WNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVI 330

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFD--LMPVRNVYSWNSMISGYARHGHGDKA 646
            + ++ D  + +A++DMY KCG +D A   F+   +  R+V SWN +ISGY  HGHG +A
Sbjct: 331 SSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEA 390

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           L LFS+M+++G  P+ +TF  +LSACSHAGL+DEG K F  M+++  + P+++ ++CMVD
Sbjct: 391 LELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKL-SVRPEMKHYACMVD 449

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQN 765
           +LGRAG L++    I K+P  P+  +W  +L AC    N   TELG  AAN LF++EP++
Sbjct: 450 MLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGN---TELGEIAANNLFQLEPEH 506

Query: 766 AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
              YVL++N+YA+  KW++V   R+ MK   +KK A  S +     VH F   D+S P  
Sbjct: 507 TGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYY 566

Query: 826 DLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLP 884
             +Y K++ L  +M+  GYVP     L D+EPE KE L++YHSEK+AVAF ++  +  +P
Sbjct: 567 REVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMP 626

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           I++ KNLRVC DCH AFKFIS I GR+I++RD NRFHHF  G+CSCGDYW
Sbjct: 627 IQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 676



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 187/398 (46%), Gaps = 36/398 (9%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+ VHG ++R+G    + V   LV+MYAKCG I D+  VF  M+ +D V W  MI+  +Q
Sbjct: 151 GEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQ 210

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
                +A+M F  M+ +G +    + IS  S+   LG                 D  +++
Sbjct: 211 AERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLG-----------------DGRMAI 253

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           S A L              VF  M E + +SWNS++  +  +    ++A+  +  M+ + 
Sbjct: 254 SRARL--------------VFDRMEERNGISWNSMLSGYTQN-GRPTDALSLFNQMQASE 298

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             PN VT + +++A S      LG ++H  VI   +  +TT+ NA++  Y KCG++D   
Sbjct: 299 CDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAV 358

Query: 515 KIFARMS-ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
           ++F       RD  SWN +ISGY  +    +A+ L   M   G   +  TF ++LSAC+ 
Sbjct: 359 EMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSH 418

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNS 632
              ++ G +  A   +  +  ++   + +VDM  + G ++ A R    +P R     W +
Sbjct: 419 AGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGA 478

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
           ++   A   HG+  L   +   L    P+H  +  ++S
Sbjct: 479 LL--LACRIHGNTELGEIAANNLFQLEPEHTGYYVLMS 514



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 209/459 (45%), Gaps = 49/459 (10%)

Query: 5   KLFHLQILKHGFA-YDVFLCNTLINVYVRVGDLASASKLFD----------EMPDRNSVS 53
           KL H  +   GF  +       LI +Y ++GDL SA  LFD          + P  NS  
Sbjct: 42  KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAP--NSFL 99

Query: 54  WACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCL 113
              ++  Y + G S EA  ++  M R G  +N +    VL+ C      G  FG  VH  
Sbjct: 100 CNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVC--ASELGAVFGEVVHGQ 157

Query: 114 VLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTIS 173
           V+++    D  V   L+ MY  C E  D A  +F+ +  RD++ W ++I++Y Q    + 
Sbjct: 158 VVRTGFGSDLFVEAALVDMYAKCGEIGD-AHEVFDRMLIRDVVCWTAMITLYEQAERPLK 216

Query: 174 VFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYV 233
              LF +MQ EGF           G  ITA   SV S    L      + +A L+ D   
Sbjct: 217 ALMLFRKMQEEGF----------LGDEITAI--SVASAVGQLGDGRMAISRARLVFDRME 264

Query: 234 G------SALVSGFARLGNFYYARKIFEQMIQKN----------VVSMNGLMEGRRKGKE 277
                  ++++SG+ + G    A  +F QM              +VS    +  +  G++
Sbjct: 265 ERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRK 324

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF--MIGKDSVSWNTMISGLDQN 335
           +H ++I S +     + N +++MY KCG +D +  +F    +  +D  SWN +ISG   +
Sbjct: 325 LHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVH 384

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G  +EA+  F  M+ +G+  ++ +  S LS+C+  G I  G++   +  KL +  ++   
Sbjct: 385 GHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHY 444

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEH--DQVSWNSVIGA 432
             ++ +   AG+L+   ++   +P    D+V W +++ A
Sbjct: 445 ACMVDMLGRAGFLNEAFRLIKKIPSRPSDEV-WGALLLA 482



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 167/389 (42%), Gaps = 63/389 (16%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            ++ H Q+++ GF  D+F+   L+++Y + G++  A ++FD M  R+ V W  +++ Y  
Sbjct: 151 GEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQ 210

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                +A  +F++M   GFL +     SV  A  + G                     DG
Sbjct: 211 AERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLG---------------------DG 249

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            ++                AR +F+ +E R+ ISWNS++S Y+Q G       LF++MQ 
Sbjct: 250 RMA-------------ISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQA 296

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
                   PN  T  +LI  +  S L   +L +++   V  + +  D  + +A++  + +
Sbjct: 297 S----ECDPNPVT--ALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMK 350

Query: 244 LGNFYYARKIFE--QMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGLFDMVAVGNGLV 298
            G+   A ++F   ++ +++V S N L+ G      GKE      R  +  +        
Sbjct: 351 CGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFT 410

Query: 299 NMYAKC---GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMS 355
           ++ + C   G ID+ R  F  M  K SV        +    C  +       + R G ++
Sbjct: 411 SILSACSHAGLIDEGRKCFADMT-KLSVR-----PEMKHYACMVD------MLGRAGFLN 458

Query: 356 SNFSLISTLSSCAS---LGWIMLGQQIHG 381
             F LI  + S  S    G ++L  +IHG
Sbjct: 459 EAFRLIKKIPSRPSDEVWGALLLACRIHG 487


>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 692

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 223/562 (39%), Positives = 323/562 (57%), Gaps = 9/562 (1%)

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G+Q+H   LKL   ++  V  +LL+LYA  G L R  +VF  MP    VSW ++I A+ D
Sbjct: 137 GEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMD 196

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           +  L  EAV    +    G  P+  T + +L A +  +    G  V     +  +A    
Sbjct: 197 AGDL-REAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVF 255

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           +  A +  Y KCGEM    ++F +M ++ D V+W +M+ GY  N    +A++L   M   
Sbjct: 256 VATAAVDLYVKCGEMAKAREVFDKMRDK-DAVAWGAMVGGYASNGHPREALDLFLAMQAE 314

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF--DVVIGSALVDMYSKCGRID 613
           G R D +  A  LSAC  +  L+ G +  A  +    EF  + V+G+AL+DMY+KCG   
Sbjct: 315 GVRPDCYAVAGALSACTRLGALDLGRQ--AIRMVDWDEFLDNPVLGTALIDMYAKCGSTA 372

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
            A   F  M  +++  WN+MI G    GH   A TL  QM+  G   +  TF+G+L +C+
Sbjct: 373 EAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCT 432

Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
           H GL+ +G ++F +M+++Y + P++E + C+VDLL RAG L +  + I+ MP+  N++I 
Sbjct: 433 HTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVIL 492

Query: 734 RTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMK 793
             +LG C     R  EL       L  +EP N+ NYV+L+N+Y++ G+WED AK R  MK
Sbjct: 493 GALLGGC--KIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMK 550

Query: 794 EAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALF 853
           E  V+K   CSWV  +  VH F  GD+SHP  D IY+KL EL  +M+  GY P T+  +F
Sbjct: 551 EKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMF 610

Query: 854 DLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREI 912
           D+E E KE  + +HSEK+A+AF +L       IR+ KNLRVC DCH+A K IS+I  REI
Sbjct: 611 DVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREI 670

Query: 913 VLRDSNRFHHFNDGKCSCGDYW 934
           ++RD+NRFH F DG CSC DYW
Sbjct: 671 IVRDNNRFHCFRDGSCSCNDYW 692



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 171/383 (44%), Gaps = 4/383 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R G+++H   ++        V   L+ +YA+CG +  ++ VF  M    +VSW  +I+  
Sbjct: 135 RAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAY 194

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
              G   EA+        +G+   +F+ +  L++CA +  +  G+ +     + G+   V
Sbjct: 195 MDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSV 254

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V+ A + LY   G +++  +VF  M + D V+W +++G +A S     EA+  +L M+ 
Sbjct: 255 FVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYA-SNGHPREALDLFLAMQA 313

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G  P+       L+A +      LG Q    V      +   +  AL+  Y KCG   +
Sbjct: 314 EGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAE 373

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
              +F +M  ++D + WN+MI G         A  L+  M + G +L+  TF  +L +C 
Sbjct: 374 AWVVFQQM-RKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCT 432

Query: 573 SVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSW 630
               ++ G    H       +   +     +VD+ S+ G +  A +  D MP+  N    
Sbjct: 433 HTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVIL 492

Query: 631 NSMISGYARHGHGDKALTLFSQM 653
            +++ G   H + + A  + +Q+
Sbjct: 493 GALLGGCKIHRNAELAEHVLTQL 515



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 165/383 (43%), Gaps = 29/383 (7%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H + LK     +  +  +L+ +Y R G L  A ++FDEMP  ++VSW  +++ Y   G 
Sbjct: 140 LHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGD 199

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA  + +     G   + +    VL AC     +    G  V     +        V+
Sbjct: 200 LREAVHVARNAFANGMRPDSFTAVRVLTACARV--ADLATGETVWRAAEQEGIAQSVFVA 257

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
              + +Y  C E    AR +F+++  +D ++W +++  Y+  G       LF  MQ EG 
Sbjct: 258 TAAVDLYVKCGEMAK-AREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGV 316

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
           R    P+ Y     ++A   + L    L +Q + MV     L +  +G+AL+  +A+ G+
Sbjct: 317 R----PDCYAVAGALSAC--TRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGS 370

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
              A  +F+QM +K+++  N ++ G       +    + G + +SG+        GL+  
Sbjct: 371 TAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCS 430

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
               G I D R  F  M     +S       ++  GC    I++   + R GL+     L
Sbjct: 431 CTHTGLIQDGRRYFHNMTKLYHIS-----PRIEHYGC----IVDL--LSRAGLLQEAHQL 479

Query: 361 ISTLSSCAS---LGWIMLGQQIH 380
           I  +   A+   LG ++ G +IH
Sbjct: 480 IDDMPMPANAVILGALLGGCKIH 502



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 88/179 (49%), Gaps = 3/179 (1%)

Query: 561 HFTFATVLSACASVA-TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           H TF   L + + +   L  G ++HA  ++     +  + ++L+ +Y++CG +  A R F
Sbjct: 117 HLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVF 176

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           D MP  +  SW ++I+ Y   G   +A+ +      +G  PD  T V VL+AC+    + 
Sbjct: 177 DEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLA 236

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
            G   +++  Q  G+   +   +  VDL  + GE+ K  E  +KM    +++ W  ++G
Sbjct: 237 TGETVWRAAEQ-EGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMR-DKDAVAWGAMVG 293


>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
 gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
          Length = 809

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 254/729 (34%), Positives = 399/729 (54%), Gaps = 29/729 (3%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNV----------VSMNGLMEGRRKGKEVH 279
           +++  ++++  +   G    A + F QMI+  V          +++ G+++    G  +H
Sbjct: 86  NIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIH 145

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
             +    L   + +GN LV+MY KCG +D ++ +F  +  K+ +SW  ++S   +NG   
Sbjct: 146 RQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILVSVFAENGRRR 205

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI-HGEGLKLGLDSDVSVSNAL 398
           E      +M  +G+      L++ L+ C+S G +     + H   +  GLD +  V+ AL
Sbjct: 206 ETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGSGLDREAVVATAL 265

Query: 399 LSLYADAGYLSRCLKVFFLMPEHD-QV--SWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           LS++A  G + +  ++F  + +H  QV   WN++I A+A       EA+     ++  G 
Sbjct: 266 LSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYA-HRGCSKEALFLLDSLQLQGV 324

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            PN +TFI+ L A SS   G+    +H  + +     E ++ NAL++ YG+CG + D  K
Sbjct: 325 KPNCITFISSLGACSSLQDGR---ALHLLIDESGFDREVSVANALVTMYGRCGSLLDSAK 381

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM-QRGQRLDHFTFATVLSACASV 574
           +F+ M+E+ D  SWNS I+ + ++    + + L+  M  + G      T  T +SAC  +
Sbjct: 382 LFSEMAEK-DLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVTLVTAMSACGGL 440

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
           A       VH       LE +  + + LVDMY K G +D A   FD    RNV +WN+M 
Sbjct: 441 ADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMA 500

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
             Y + G     L L   M+ DG  PD VTFV +LS C H+GL++E   +F +M + +G+
Sbjct: 501 GAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNFVAMRREFGI 560

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPIT--PNSLIWRTVLGACCRANCRKTELGR 752
            P  + +SC++DLL RAGEL + E+FI ++ ++   +S +W  +LGAC       +   R
Sbjct: 561 DPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMALLGACRSLGDSSSRARR 620

Query: 753 KAANML--FEMEPQN----AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
            A N +   +MEP++    +  +V LAN+ A+ G W++    RKAM E  ++KE G S +
Sbjct: 621 AARNAMDVEKMEPRSQHDPSAAHVALANICAASGNWDEALSIRKAMAEKGLRKEPGRSLI 680

Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSY 866
            +K+ +H FVAGD  HP ++ IY +L+ L + M D GYV  T     ++    K DL+  
Sbjct: 681 AVKNRLHEFVAGDRDHPRREEIYAELRRLERAMVDRGYVVDTGMVTHNVGEADKRDLLGC 740

Query: 867 HSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFND 925
           HSEK+AVAF VL+      +RI+KNLR CGDCH+A K IS I GREIV+RDSNRFHHF +
Sbjct: 741 HSEKLAVAFGVLSTPPGSSLRIIKNLRACGDCHTAIKLISAIEGREIVVRDSNRFHHFRN 800

Query: 926 GKCSCGDYW 934
           G CSCGDYW
Sbjct: 801 GSCSCGDYW 809



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 230/477 (48%), Gaps = 19/477 (3%)

Query: 275 GKEVHGYLIRSGLF-------DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
           GK +H  +  SGL            +GN LV MY KCG  D+++  F  +  K+  SW +
Sbjct: 33  GKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFSWTS 92

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           ++      G + +A+  F  M + G+       ++ L+ C  L  +  G  IH +     
Sbjct: 93  ILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQIQDKL 152

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
           LDSD+ + NAL+S+Y   G L    ++F  +   + +SW  ++  FA++     E     
Sbjct: 153 LDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILVSVFAEN-GRRRETWGLL 211

Query: 448 LDMRRAGWSPNGVTFINILAAASSFS-MGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
             M   G  P+ V  + +L   SS   + +     H  ++   +  E  +  ALLS + +
Sbjct: 212 RSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGSGLDREAVVATALLSMFAR 271

Query: 507 CGEMDDCEKIFARMSERRDEV--SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
           CG +D   +IF ++++   +V   WN+MI+ Y H     +A+ L+  +  +G + +  TF
Sbjct: 272 CGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITF 331

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
            + L AC+S   L+ G  +H     +  + +V + +ALV MY +CG +  +++ F  M  
Sbjct: 332 ISSLGACSS---LQDGRALHLLIDESGFDREVSVANALVTMYGRCGSLLDSAKLFSEMAE 388

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVD-EGF 682
           +++ SWNS I+ +A HG  D+ + L  QM+ +G L P  VT V  +SAC   GL D    
Sbjct: 389 KDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVTLVTAMSAC--GGLADPSSS 446

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           K     ++  GL  +    + +VD+ G+AG++D    +I    +  N   W  + GA
Sbjct: 447 KRVHERARELGLESETCVANGLVDMYGKAGDVD-TARYIFDRALRRNVTTWNAMAGA 502



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 151/577 (26%), Positives = 259/577 (44%), Gaps = 79/577 (13%)

Query: 5   KLFHLQILKHGFAYD-------VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACI 57
           K  H QI + G   D        FL N L+ +Y + G    A + FD +  +N  SW  I
Sbjct: 34  KRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFSWTSI 93

Query: 58  VSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
           +  Y H G+  +A + F +M++AG   +R    + L  C        + G  +H  +   
Sbjct: 94  LVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGIL--KRLEDGAGIHRQIQDK 151

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
               D  + N L++MYG C    D A+++F+ +E +++ISW  ++SV+++ G     + L
Sbjct: 152 LLDSDLEIGNALVSMYGKC-GRLDLAKQLFDCLEMKNVISWTILVSVFAENGRRRETWGL 210

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYS-SVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
              M  EG    +KP++    +L+    S  VL     +      +  +GL  +  V +A
Sbjct: 211 LRSMAVEG----IKPDKVLLLTLLNVCSSRGVLDEDSWMAH--DYIVGSGLDREAVVATA 264

Query: 237 LVSGFARLGNFYYARKIFE--------------------------------------QMI 258
           L+S FAR G    AR+IFE                                      Q +
Sbjct: 265 LLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGV 324

Query: 259 QKNV---VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
           + N    +S  G     + G+ +H  +  SG    V+V N LV MY +CG++ DS  +F 
Sbjct: 325 KPNCITFISSLGACSSLQDGRALHLLIDESGFDREVSVANALVTMYGRCGSLLDSAKLFS 384

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD-GLMSSNFSLISTLSSCASLGWIM 374
            M  KD  SWN+ I+    +G  +E I     MR + GL  S+ +L++ +S+C  L    
Sbjct: 385 EMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVTLVTAMSACGGLADPS 444

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
             +++H    +LGL+S+  V+N L+ +Y  AG +     +F      +  +WN++ GA+ 
Sbjct: 445 SSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAY- 503

Query: 435 DSEALVSEAVKYYL-DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN---V 490
             +  V+  V + +  M+R G+ P+ VTF+++L+          GH    +  +YN   +
Sbjct: 504 -RQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVC--------GHSGLLEEARYNFVAM 554

Query: 491 ANETTIE------NALLSCYGKCGEMDDCEKIFARMS 521
             E  I+      + ++    + GE+   E   AR+S
Sbjct: 555 RREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARIS 591



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 187/389 (48%), Gaps = 17/389 (4%)

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL---DSDVS----VSNALL 399
           A+ R G+  +  S    L  C  LG +  G+++H +  + GL   D + S    + N L+
Sbjct: 4   AISRSGVDDACRSYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLV 63

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
            +Y   G      + F  +   +  SW S++ A+  +  L ++A++ +  M +AG  P+ 
Sbjct: 64  QMYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHA-GLHAQALERFHQMIKAGVEPDR 122

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           + F+  L         + G  +H Q+    + ++  I NAL+S YGKCG +D  +++F  
Sbjct: 123 LVFLAALNVCGILKRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDC 182

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL-E 578
           + E ++ +SW  ++S +  N    +   L+  M   G + D     T+L+ C+S   L E
Sbjct: 183 L-EMKNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDE 241

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP---VRNVYSWNSMIS 635
                H   V + L+ + V+ +AL+ M+++CGR+D A   F+ +     + +  WN+MI+
Sbjct: 242 DSWMAHDYIVGSGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMIT 301

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
            YA  G   +AL L   ++L G  P+ +TF+  L ACS   L D    H   +    G  
Sbjct: 302 AYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACS--SLQDGRALHL--LIDESGFD 357

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKM 724
            ++   + +V + GR G L    +  ++M
Sbjct: 358 REVSVANALVTMYGRCGSLLDSAKLFSEM 386



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 194/455 (42%), Gaps = 57/455 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +D    H QI       D+ + N L+++Y + G L  A +LFD +  +N +SW  +VS +
Sbjct: 139 EDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILVSVF 198

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   E   + + M   G   ++  L ++L  C   G       M  H  ++ S    
Sbjct: 199 AENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWM-AHDYIVGSGLDR 257

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRD---LISWNSIISVYSQRGDTISVFKLF 178
           + +V+  L++M+  C    D AR IFE++       +  WN++I+ Y+ RG +     L 
Sbjct: 258 EAVVATALLSMFARC-GRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLL 316

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
             +Q +G    +KPN  TF S +  A SS+  G    + +  ++ ++G   ++ V +ALV
Sbjct: 317 DSLQLQG----VKPNCITFISSL-GACSSLQDG----RALHLLIDESGFDREVSVANALV 367

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNG-----------------LMEGRRKG------ 275
           + + R G+   + K+F +M +K++ S N                  L + R +G      
Sbjct: 368 TMYGRCGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSS 427

Query: 276 -------------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                              K VH      GL     V NGLV+MY K G +D +R +F  
Sbjct: 428 VTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDR 487

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
            + ++  +WN M     Q G     +     M+RDG    + + +S LS C   G +   
Sbjct: 488 ALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEA 547

Query: 377 Q-QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
           +        + G+D      + ++ L A AG L +
Sbjct: 548 RYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQ 582



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 126/264 (47%), Gaps = 23/264 (8%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +D +  HL I + GF  +V + N L+ +Y R G L  ++KLF EM +++  SW   ++ +
Sbjct: 342 QDGRALHLLIDESGFDREVSVANALVTMYGRCGSLLDSAKLFSEMAEKDLASWNSAIAAH 401

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG----PSGFKFGMQVHCLVLKS 117
            + G S+E  K+  +M   G L       +++ A   CG    PS  K   +VH    + 
Sbjct: 402 AYHGRSDECIKLLDQMRGEGGLEPSSV--TLVTAMSACGGLADPSSSK---RVHERAREL 456

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
               +  V+N L+ MYG   +  D AR IF+    R++ +WN++   Y Q G T  V  L
Sbjct: 457 GLESETCVANGLVDMYGKAGD-VDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWL 515

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ----ILAMVKKAGLLSDLYV 233
              MQR+G+R    P+  TF SL+     SV   S LL++     +AM ++ G+      
Sbjct: 516 VRTMQRDGYR----PDSVTFVSLL-----SVCGHSGLLEEARYNFVAMRREFGIDPSPKH 566

Query: 234 GSALVSGFARLGNFYYARKIFEQM 257
            S ++   AR G    A     ++
Sbjct: 567 YSCVIDLLARAGELQQAEDFIARI 590


>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
          Length = 645

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 223/562 (39%), Positives = 323/562 (57%), Gaps = 9/562 (1%)

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G+Q+H   LKL   ++  V  +LL+LYA  G L R  +VF  MP    VSW ++I A+ D
Sbjct: 90  GEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMD 149

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           +  L  EAV    +    G  P+  T + +L A +  +    G  V     +  +A    
Sbjct: 150 AGDL-REAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVF 208

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           +  A +  Y KCGEM    ++F +M ++ D V+W +M+ GY  N    +A++L   M   
Sbjct: 209 VATAAVDLYVKCGEMAKAREVFDKMRDK-DAVAWGAMVGGYASNGHPREALDLFLAMQAE 267

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF--DVVIGSALVDMYSKCGRID 613
           G R D +  A  LSAC  +  L+ G +  A  +    EF  + V+G+AL+DMY+KCG   
Sbjct: 268 GVRPDCYAVAGALSACTRLGALDLGRQ--AIRMVDWDEFLDNPVLGTALIDMYAKCGSTA 325

Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
            A   F  M  +++  WN+MI G    GH   A TL  QM+  G   +  TF+G+L +C+
Sbjct: 326 EAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCT 385

Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
           H GL+ +G ++F +M+++Y + P++E + C+VDLL RAG L +  + I+ MP+  N++I 
Sbjct: 386 HTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVIL 445

Query: 734 RTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMK 793
             +LG C     R  EL       L  +EP N+ NYV+L+N+Y++ G+WED AK R  MK
Sbjct: 446 GALLGGC--KIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMK 503

Query: 794 EAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALF 853
           E  V+K   CSWV  +  VH F  GD+SHP  D IY+KL EL  +M+  GY P T+  +F
Sbjct: 504 EKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMF 563

Query: 854 DLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREI 912
           D+E E KE  + +HSEK+A+AF +L       IR+ KNLRVC DCH+A K IS+I  REI
Sbjct: 564 DVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREI 623

Query: 913 VLRDSNRFHHFNDGKCSCGDYW 934
           ++RD+NRFH F DG CSC DYW
Sbjct: 624 IVRDNNRFHCFRDGSCSCNDYW 645



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 171/383 (44%), Gaps = 4/383 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R G+++H   ++        V   L+ +YA+CG +  ++ VF  M    +VSW  +I+  
Sbjct: 88  RAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAY 147

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
              G   EA+        +G+   +F+ +  L++CA +  +  G+ +     + G+   V
Sbjct: 148 MDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSV 207

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V+ A + LY   G +++  +VF  M + D V+W +++G +A S     EA+  +L M+ 
Sbjct: 208 FVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYA-SNGHPREALDLFLAMQA 266

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G  P+       L+A +      LG Q    V      +   +  AL+  Y KCG   +
Sbjct: 267 EGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAE 326

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
              +F +M  ++D + WN+MI G         A  L+  M + G +L+  TF  +L +C 
Sbjct: 327 AWVVFQQM-RKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCT 385

Query: 573 SVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSW 630
               ++ G    H       +   +     +VD+ S+ G +  A +  D MP+  N    
Sbjct: 386 HTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVIL 445

Query: 631 NSMISGYARHGHGDKALTLFSQM 653
            +++ G   H + + A  + +Q+
Sbjct: 446 GALLGGCKIHRNAELAEHVLTQL 468



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 165/383 (43%), Gaps = 29/383 (7%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H + LK     +  +  +L+ +Y R G L  A ++FDEMP  ++VSW  +++ Y   G 
Sbjct: 93  LHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGD 152

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA  + +     G   + +    VL AC     +    G  V     +        V+
Sbjct: 153 LREAVHVARNAFANGMRPDSFTAVRVLTACARV--ADLATGETVWRAAEQEGIAQSVFVA 210

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
              + +Y  C E    AR +F+++  +D ++W +++  Y+  G       LF  MQ EG 
Sbjct: 211 TAAVDLYVKCGEMAK-AREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGV 269

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
           R    P+ Y     ++A   + L    L +Q + MV     L +  +G+AL+  +A+ G+
Sbjct: 270 R----PDCYAVAGALSAC--TRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGS 323

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
              A  +F+QM +K+++  N ++ G       +    + G + +SG+        GL+  
Sbjct: 324 TAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCS 383

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
               G I D R  F  M     +S       ++  GC    I++   + R GL+     L
Sbjct: 384 CTHTGLIQDGRRYFHNMTKLYHIS-----PRIEHYGC----IVDL--LSRAGLLQEAHQL 432

Query: 361 ISTLSSCAS---LGWIMLGQQIH 380
           I  +   A+   LG ++ G +IH
Sbjct: 433 IDDMPMPANAVILGALLGGCKIH 455



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 88/179 (49%), Gaps = 3/179 (1%)

Query: 561 HFTFATVLSACASVA-TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           H TF   L + + +   L  G ++HA  ++     +  + ++L+ +Y++CG +  A R F
Sbjct: 70  HLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVF 129

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           D MP  +  SW ++I+ Y   G   +A+ +      +G  PD  T V VL+AC+    + 
Sbjct: 130 DEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLA 189

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
            G   +++  Q  G+   +   +  VDL  + GE+ K  E  +KM    +++ W  ++G
Sbjct: 190 TGETVWRAAEQ-EGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMR-DKDAVAWGAMVG 246


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 251/704 (35%), Positives = 379/704 (53%), Gaps = 53/704 (7%)

Query: 189 SLKPNEYTFGSLITAAYS-SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           +L  N   F +L+   ++ S+  G  L  QI+         S +Y+ ++LV+ +A+    
Sbjct: 2   TLPSNRSFFTALLQYTHNRSLQKGKALHAQIIKSSS-----SCVYIANSLVNLYAKCQRL 56

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------------- 274
             A+ +FE++  K+VVS N ++ G  +                                 
Sbjct: 57  REAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFT 116

Query: 275 ----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                     G+  H   I+      V VG+ L+NMY K G   ++R VF  M  ++SVS
Sbjct: 117 AASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVS 176

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W TMISG        EA+  F  MRR+    + F   S LS+      +  G+QIH   +
Sbjct: 177 WATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAV 236

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           K GL S VSV NAL+++YA  G L   L+ F    + + ++W+++I  +A S     +A+
Sbjct: 237 KNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQS-GDSDKAL 295

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
           K +  M  +G  P+  TF+ ++ A S       G QVH  ++K    ++  +  AL+  Y
Sbjct: 296 KLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMY 355

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            KC  + D  K F  + E  D V W SMI GY+ N     A++L   M   G   +  T 
Sbjct: 356 AKCSSIVDARKGFDYLQEP-DIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTM 414

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
           A+VL AC+S+A LE+G ++HA  V+     +V IGSAL  MY+KCG +   +  F  MP 
Sbjct: 415 ASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPA 474

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           R+V SWN+MISG +++G G +AL LF +M+L+G  PD+VTFV +LSACSH GLV+ G+ +
Sbjct: 475 RDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGY 534

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           F+ M   +G+ P++E ++CMVD+L RAG+L +  EF     I     +WR +LGAC   N
Sbjct: 535 FRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGAC--RN 592

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
            R  ELG  A   L E+  Q +  YVLL+++Y++ G+WEDV + R+ MK   V KE GCS
Sbjct: 593 YRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCS 652

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQT 848
           W+ +K GVHVFV  D+ HP+   I+ +L++L+++M+D GY P T
Sbjct: 653 WIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEPAT 696



 Score =  215 bits (548), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 254/521 (48%), Gaps = 56/521 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H QI+K   +  V++ N+L+N+Y +   L  A  +F+ + +++ VSW CI++GY
Sbjct: 23  QKGKALHAQIIKSSSSC-VYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGY 81

Query: 62  THKGMSNEA--CKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           +  G S  +   ++F+ M       N +    V  A      +    G   H + +K + 
Sbjct: 82  SQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAA--GGRLAHAVAIKMDS 139

Query: 120 TFDGLVSNVLIAMYGSCLES-TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
             D  V + L+ MY  C    T  AR++F+ +  R+ +SW ++IS Y+ +        LF
Sbjct: 140 CRDVFVGSSLMNMY--CKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLF 197

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
             M+RE        NE+ F S+++A     L  +   +QI  +  K GLLS + VG+ALV
Sbjct: 198 RLMRRE----EEGENEFVFTSVLSALTLPELVNNG--KQIHCIAVKNGLLSIVSVGNALV 251

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------ 274
           + +A+ G+   A + FE    KN ++ + ++ G  +                        
Sbjct: 252 TMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEF 311

Query: 275 -----------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                            GK+VH YL++ G    + V   LV+MYAKC +I D+R  F ++
Sbjct: 312 TFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYL 371

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
              D V W +MI G  QNG  E+A+  +  M  +G++ +  ++ S L +C+SL  +  G+
Sbjct: 372 QEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGK 431

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           QIH   +K G   +V + +AL ++YA  G L     VF  MP  D +SWN++I   + + 
Sbjct: 432 QIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQN- 490

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
               EA++ + +M+  G  P+ VTF+NIL+A S   + + G
Sbjct: 491 GCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERG 531



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/474 (30%), Positives = 231/474 (48%), Gaps = 58/474 (12%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +L H   +K     DVF+ ++L+N+Y + G    A K+FD MP+RNSVSWA ++SGY  +
Sbjct: 128 RLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQ 187

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
            ++ EA  +F+ M R     N +   SVL A     P     G Q+HC+ +K+       
Sbjct: 188 KLAAEALGLFRLMRREEEGENEFVFTSVLSALTL--PELVNNGKQIHCIAVKNGLLSIVS 245

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V N L+ MY  C  S D A + FE    ++ I+W+++I+ Y+Q GD+    KLFS M   
Sbjct: 246 VGNALVTMYAKC-GSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLS 304

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G R    P+E+TF  +I A   S L  ++  +Q+   + K G  S +YV +ALV  +A+ 
Sbjct: 305 GIR----PSEFTFVGVINAC--SDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKC 358

Query: 245 GNFYYARKIFEQMIQKNVV-------------------SMNGLME--------------- 270
            +   ARK F+ + + ++V                   S+ G ME               
Sbjct: 359 SSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVL 418

Query: 271 -------GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                     +GK++H   ++ G    V +G+ L  MYAKCG + D   VFR M  +D +
Sbjct: 419 KACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVI 478

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG----QQI 379
           SWN MISGL QNGC +EA+  F  M+ +G      + ++ LS+C+ +G +  G    + +
Sbjct: 479 SWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMM 538

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK-VFFLMPEHDQVSWNSVIGA 432
             E    G+D  V     ++ + + AG L   ++       +H    W  ++GA
Sbjct: 539 FDE---FGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGA 589



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 164/351 (46%), Gaps = 20/351 (5%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H   +K+G    V + N L+ +Y + G L  A + F+   D+NS++W+ +++GY 
Sbjct: 227 NGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYA 286

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G S++A K+F  M  +G   + +    V+ AC + G +    G QVH  +LK      
Sbjct: 287 QSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAW--EGKQVHDYLLKLGFESQ 344

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V   L+ MY  C    D AR+ F+ ++  D++ W S+I  Y Q G+      L+ RM+
Sbjct: 345 IYVMTALVDMYAKCSSIVD-ARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRME 403

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            EG    + PNE T  S++ A   S L+     +QI A   K G   ++ +GSAL + +A
Sbjct: 404 MEG----ILPNELTMASVLKAC--SSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYA 457

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---GKEVHGYLIRSGLFDMVAVGNGLVN 299
           + G       +F +M  ++V+S N ++ G  +   GKE         L          VN
Sbjct: 458 KCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVN 517

Query: 300 MYAKC---GTIDDSRSVFRFM---IGKDS--VSWNTMISGLDQNGCYEEAI 342
           + + C   G ++     FR M    G D     +  M+  L + G  +EAI
Sbjct: 518 ILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAI 568


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/628 (37%), Positives = 359/628 (57%), Gaps = 13/628 (2%)

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           SR  F   I   S S +  +  L  +G  +EA++    + R+ +    +  I  L+ C S
Sbjct: 49  SRYTFSRQI---SFSPSPNLKTLCSSGQLKEALLQMAILGRE-VKFEGYDTI--LNECVS 102

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
              I  GQ++H   +K      V +   L+ LY     L    ++F  MP+ + VSW ++
Sbjct: 103 QRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAM 162

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           I A++       EA+  +++M R+   PN  TF  IL +       + G Q+H+  IK N
Sbjct: 163 ISAYSQ-RGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRN 221

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV 549
             +   + ++LL  Y K G + D   +F  + ER D V+  ++ISGY    L  +A+ L 
Sbjct: 222 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPER-DVVACTAIISGYAQMGLDEEALKLF 280

Query: 550 WFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
             +   G   +  T+A+VL+A + +A L  G +VH+  +R+     VV+ ++L+DMYSKC
Sbjct: 281 RQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKC 340

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGV 668
           G + YA R FD MP R   SWN+M+ GY++HG   + L LF  M+ +  + PD +T++ V
Sbjct: 341 GNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAV 400

Query: 669 LSACSHAGLVDEGFKHFKSM-SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPIT 727
           LS CSH  L D G + F +M +   G+ P +  + C+VDLLGRAG +++  +FI KMP  
Sbjct: 401 LSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFV 460

Query: 728 PNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
           P + IW ++LG+C R +    E+G      L E+EP+NA NYV+L+N+YAS GKWED+  
Sbjct: 461 PTAAIWGSLLGSC-RVH-SDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRN 518

Query: 788 ARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQ 847
            R  M+E  V KE G SWV +   VH F A D +HP ++ + +K+KEL+ K ++ GYVP 
Sbjct: 519 IRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFKEDGYVPD 578

Query: 848 TKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISK 906
               L+D++ E KE ++  HSEK+A+AF L    +   IR++KNLR+C DCHS  KF+S+
Sbjct: 579 LSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSR 638

Query: 907 IVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +  R ++LRD NRFH+   G CSCGDYW
Sbjct: 639 LYARTVILRDKNRFHNIVGGVCSCGDYW 666



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 203/403 (50%), Gaps = 10/403 (2%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R+G+ VH ++I++     V +   L+ +Y KC  + D+R +F  M  K+ VSW  MIS  
Sbjct: 107 REGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAY 166

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC-ASLGWIMLGQQIHGEGLKLGLDSD 391
            Q G   EA+  F  M R     ++F+  + L+SC  SLG+   G+QIH   +K   +S 
Sbjct: 167 SQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGF-ETGRQIHSIAIKRNYESH 225

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           + V ++LL +YA +G +     VF  +PE D V+  ++I  +A    L  EA+K +  ++
Sbjct: 226 MFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQM-GLDEEALKLFRQLQ 284

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             G + N VT+ ++L A S  +    G QVH+ V++    +   + N+L+  Y KCG + 
Sbjct: 285 IEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVC 344

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSA 570
              +IF  M ER   +SWN+M+ GY  + +  + + L   M +  + + D  T+  VLS 
Sbjct: 345 YARRIFDSMPERTC-ISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSG 403

Query: 571 CASVATLERGMEVHACGV--RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP-VRNV 627
           C+     + G+E+    V  +  +E D+     +VD+  + GR++ A  F   MP V   
Sbjct: 404 CSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTA 463

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
             W S++ G  R  H D  + +    KL    P++     +LS
Sbjct: 464 AIWGSLL-GSCR-VHSDVEIGIIVGQKLLELEPENAGNYVILS 504



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 148/276 (53%), Gaps = 15/276 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H  ++K  +   V+L   LI +Y +   L  A ++FDEMP +N VSW  ++S Y
Sbjct: 107 REGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAY 166

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           + +G + EA  +F EM+R+    N +   ++L +C   G  GF+ G Q+H + +K N   
Sbjct: 167 SQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCY--GSLGFETGRQIHSIAIKRNYES 224

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V + L+ MY       D A  +F  +  RD+++  +IIS Y+Q G      KLF ++
Sbjct: 225 HMFVGSSLLDMYAKSGRICD-AHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQL 283

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL---QQILAMVKKAGLLSDLYVGSALV 238
           Q EG    +  N  T+ S++TA     LSG   L   +Q+ + V ++G  S + + ++L+
Sbjct: 284 QIEG----MNSNSVTYASVLTA-----LSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLI 334

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK 274
             +++ GN  YAR+IF+ M ++  +S N ++ G  K
Sbjct: 335 DMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSK 370



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/371 (22%), Positives = 169/371 (45%), Gaps = 46/371 (12%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME----- 270
           Q++   + K   L  +Y+ + L+  + +      AR++F++M QKNVVS   ++      
Sbjct: 110 QRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQR 169

Query: 271 ------------------------------------GRRKGKEVHGYLIRSGLFDMVAVG 294
                                               G   G+++H   I+      + VG
Sbjct: 170 GFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVG 229

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           + L++MYAK G I D+  VF  +  +D V+   +ISG  Q G  EEA+  F  ++ +G+ 
Sbjct: 230 SSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMN 289

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
           S++ +  S L++ + L  +  G+Q+H   L+ G  S V + N+L+ +Y+  G +    ++
Sbjct: 290 SNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRI 349

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG-WSPNGVTFINILAAASSFS 473
           F  MPE   +SWN+++  ++    +  E ++ +  MR      P+ +T++ +L+  S   
Sbjct: 350 FDSMPERTCISWNAMLVGYS-KHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQ 408

Query: 474 MGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
           +  +G ++   ++      E  I +   ++   G+ G +++      +M        W S
Sbjct: 409 LEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGS 468

Query: 532 MI-SGYIHNEL 541
           ++ S  +H+++
Sbjct: 469 LLGSCRVHSDV 479



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 152/327 (46%), Gaps = 16/327 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H   +K  +   +F+ ++L+++Y + G +  A  +F  +P+R+ V+   I+SGY
Sbjct: 208 ETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGY 267

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G+  EA K+F+++   G   N     SVL A    G +    G QVH  VL+S Q  
Sbjct: 268 AQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALS--GLAALNHGKQVHSHVLRSGQYS 325

Query: 122 DGLVSNVLIAMYGSCLESTDC-ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
             ++ N LI MY  C     C ARRIF+ +  R  ISWN+++  YS+ G    V +LF  
Sbjct: 326 YVVLLNSLIDMYSKC--GNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKL 383

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVK-KAGLLSDLYVGSALVS 239
           M+ E     +KP+  T+ ++++      L     L+    MV  K G+  D+     +V 
Sbjct: 384 MREEN---KVKPDSITYLAVLSGCSHGQLE-DMGLEIFYNMVNGKDGIEPDIGHYGCVVD 439

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR-RKGKEVH-GYLIRSGLFDMVAVGNG- 296
              R G    A    ++M      ++ G + G  R   +V  G ++   L ++     G 
Sbjct: 440 LLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGN 499

Query: 297 ---LVNMYAKCGTIDDSRSVFRFMIGK 320
              L N+YA  G  +D R++   M  K
Sbjct: 500 YVILSNLYASAGKWEDMRNIRDLMQEK 526


>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 556

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/588 (38%), Positives = 343/588 (58%), Gaps = 33/588 (5%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           MRR G+  ++++  + LS+C      + G+Q+H    K G  ++V V +AL+ +YA    
Sbjct: 1   MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCD 60

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +    KVF  MP                   L+ E +           + + V+F ++ +
Sbjct: 61  MLMAEKVFEEMP------------------TLLLENLT----------ALDEVSFSSVFS 92

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
           A ++    + G QVH   +K  V N   I N+L   YGKCG  +D  K+F+    R D V
Sbjct: 93  ACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGAR-DVV 151

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           +WN MI  Y++N     A N  W M ++G   D  ++++VL +CA++A L +G  +H   
Sbjct: 152 TWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQI 211

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
           +R+    ++ + S+L+ MY+KCG +  A + F+    RNV  W ++I+   +HGH +  +
Sbjct: 212 IRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVV 271

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDL 707
            LF QM  +G  PD++TFV VLSACSH G V+EGF +F SM +V+G+ P  E ++C+VDL
Sbjct: 272 ELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDL 331

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAV 767
           L RAGELD+ + FI  MPI P++ +W  +L AC   N     +G++ A  LF++EP N  
Sbjct: 332 LSRAGELDRAKRFIELMPIKPDASVWGALLSAC--RNHSNLIMGKEVALKLFDLEPDNPG 389

Query: 768 NYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDL 827
           NYVLL N+    G   +  + R+ M+   V+KE GCSW+ +K+  +VF   D+SH +   
Sbjct: 390 NYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKE 449

Query: 828 IYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIR 886
           IYE L++L + ++  GYV +T+FA+   E E KE  + YHSEKIA+AF +L+  +  PIR
Sbjct: 450 IYEMLEKLKELVKKKGYVAETEFAINTAE-EYKEQSLWYHSEKIALAFGLLSLPAGAPIR 508

Query: 887 IMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           I KNLR CGDCH+  KF S+I  REI++RD NRFHHF +G CSCGDYW
Sbjct: 509 IKKNLRTCGDCHTVMKFASEIFAREIIVRDINRFHHFTNGICSCGDYW 556



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 180/364 (49%), Gaps = 18/364 (4%)

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
           R  + PN YTF ++++A   +  + S   +Q+ ++V K G L++++V SALV  +A+  +
Sbjct: 3   RSGVYPNHYTFSAVLSACTDT--TASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCD 60

Query: 247 FYYARKIFEQMIQKNVVSMNGLME--------------GRRKGKEVHGYLIRSGLFDMVA 292
              A K+FE+M    + ++  L E                  GK+VHG  ++ G++++V 
Sbjct: 61  MLMAEKVFEEMPTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVY 120

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           + N L +MY KCG  +D   +F     +D V+WN MI     N  YE+A  +F  MRR G
Sbjct: 121 INNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKG 180

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
            +    S  S L SCA+L  +  G  IH + ++ G   ++ V+++L+++YA  G L    
Sbjct: 181 SIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAF 240

Query: 413 KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
           ++F    + + V W ++I A        +  V+ +  M R G  P+ +TF+++L+A S  
Sbjct: 241 QIFEETEDRNVVCWTAIIAA-CQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHT 299

Query: 473 SMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
              + G      +IK + +         ++    + GE+D  ++    M  + D   W +
Sbjct: 300 GRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGA 359

Query: 532 MISG 535
           ++S 
Sbjct: 360 LLSA 363



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 147/321 (45%), Gaps = 18/321 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   LK G    V++ N+L ++Y + G     +KLF     R+ V+W  ++  Y + 
Sbjct: 104 KQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYN 163

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
               +AC  F  M R G + +  +  SVL +C     +    G  +H  +++S    +  
Sbjct: 164 HNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANL--AALYQGTLIHNQIIRSGFVKNLR 221

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V++ LI MY  C    D A +IFEE E R+++ W +II+   Q G    V +LF +M RE
Sbjct: 222 VASSLITMYAKCGSLVD-AFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLRE 280

Query: 185 GFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           G    +KP+  TF S+++A   +  V  G +      +M+K  G+       + +V   +
Sbjct: 281 G----IKPDYITFVSVLSACSHTGRVEEGFFYFN---SMIKVHGIYPGHEHYACIVDLLS 333

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNG--LMEGRRKGKEVHGYLIRSGLFDMVAVGNG---- 296
           R G    A++  E M  K   S+ G  L   R     + G  +   LFD+     G    
Sbjct: 334 RAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVL 393

Query: 297 LVNMYAKCGTIDDSRSVFRFM 317
           L N+  + G ++++  V R M
Sbjct: 394 LCNILTRNGMLNEADEVRRKM 414



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 153/343 (44%), Gaps = 65/343 (18%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  + KHGF  +VF+ + L+++Y +  D+  A K+F+EMP                    
Sbjct: 33  HSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMP-------------------- 72

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
                +  E + A   L+  +  SV  AC   G    +FG QVH + LK        ++N
Sbjct: 73  ----TLLLENLTA---LDEVSFSSVFSACANAG--NLEFGKQVHGVALKLGVWNLVYINN 123

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L  MYG C    D A ++F     RD+++WN +I  Y    +       F  M+R+G  
Sbjct: 124 SLSDMYGKCGLFNDVA-KLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKG-- 180

Query: 188 YSLKPNEYTFGSLI--TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
               P+E ++ S++   A  +++  G+ +  QI+    ++G + +L V S+L++ +A+ G
Sbjct: 181 --SIPDEASYSSVLHSCANLAALYQGTLIHNQII----RSGFVKNLRVASSLITMYAKCG 234

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
           +   A +IFE+   +NVV    ++   ++    HG+             N +V ++ +  
Sbjct: 235 SLVDAFQIFEETEDRNVVCWTAIIAACQQ----HGH------------ANWVVELFEQ-- 276

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
                  + R  I  D +++ +++S     G  EE    F +M
Sbjct: 277 -------MLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSM 312



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 162/407 (39%), Gaps = 79/407 (19%)

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
           M R+G   N Y   +VL AC +   S    G Q+H LV K     +  V + L+ MY  C
Sbjct: 1   MRRSGVYPNHYTFSAVLSACTDTTAS--VHGEQMHSLVWKHGFLAEVFVVSALVDMYAKC 58

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
            +    A ++FEE+ T  L +  ++        D +S   +FS     G           
Sbjct: 59  CDML-MAEKVFEEMPTLLLENLTAL--------DEVSFSSVFSACANAG--------NLE 101

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           FG                 +Q+  +  K G+ + +Y+ ++L   + + G F    K+F  
Sbjct: 102 FG-----------------KQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSN 144

Query: 257 MIQKNVVSMNGLMEG-----------------RRKGK----------------------- 276
              ++VV+ N ++                   RRKG                        
Sbjct: 145 TGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQG 204

Query: 277 -EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
             +H  +IRSG    + V + L+ MYAKCG++ D+  +F     ++ V W  +I+   Q+
Sbjct: 205 TLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQH 264

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GLDSDVSV 394
           G     +  F  M R+G+     + +S LS+C+  G +  G       +K+ G+      
Sbjct: 265 GHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEH 324

Query: 395 SNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALV 440
              ++ L + AG L R  +   LMP + D   W +++ A  +   L+
Sbjct: 325 YACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLI 371


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/692 (32%), Positives = 362/692 (52%), Gaps = 36/692 (5%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNM--YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           K++H + I+ GL         ++      + G +  +R VF  +       WNTMI G  
Sbjct: 24  KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYS 83

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           +    +  +  +  M    +    F+    L        +  G+ +    +K G DS++ 
Sbjct: 84  RINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLF 143

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V  A + +++    +    KVF +    + V+WN ++  +   +    ++   +++M + 
Sbjct: 144 VQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQF-KKSKMLFIEMEKR 202

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G SPN VT + +L+A S     + G  ++  +    V     +EN L+  +  CGEMD+ 
Sbjct: 203 GVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEA 262

Query: 514 EKIFARMSER------------------------------RDEVSWNSMISGYIHNELLP 543
           + +F  M  R                              RD VSW +MI GY+      
Sbjct: 263 QSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFI 322

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +A+ L   M     + D FT  ++L+ACA +  LE G  V     +  ++ D  +G+AL+
Sbjct: 323 EALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALI 382

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           DMY KCG +  A + F  M  ++ ++W +MI G A +GHG++AL +FS M      PD +
Sbjct: 383 DMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEI 442

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           T++GVL AC+HAG+V++G   F SM+  +G+ P +  + CMVDLLGRAG L++  E I  
Sbjct: 443 TYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVN 502

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           MP+ PNS++W ++LGA CR + +  +L   AA  + E+EP+N   YVLL N+YA+  +WE
Sbjct: 503 MPVKPNSIVWGSLLGA-CRVH-KNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWE 560

Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAG 843
           ++ + RK M E  +KK  GCS + +   V+ FVAGD+SHP+   IY KL+ + Q +  AG
Sbjct: 561 NLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDLIKAG 620

Query: 844 YVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFK 902
           Y P T     DL  E KE  +  HSEK+A+A+ L  +   + IRI+KNLR+C DCH   K
Sbjct: 621 YSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVKNLRMCVDCHHMAK 680

Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            +S+   RE+++RD  RFHHF  G CSC ++W
Sbjct: 681 LVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 118/538 (21%), Positives = 230/538 (42%), Gaps = 54/538 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYV--RVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           K  H   +K G + D      +I        G +  A ++FD +P      W  ++ GY+
Sbjct: 24  KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYS 83

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQV-HCLVLKSNQTF 121
                     M+  M+ +    +R+    +L+        GF   M + +  VL ++   
Sbjct: 84  RINHPQNGVSMYLLMLASNIKPDRFTFPFLLK--------GFTRNMALQYGKVLLNHAVK 135

Query: 122 DGLVSNVL-----IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
            G  SN+      I M+  C    D AR++F+  +  ++++WN ++S Y++         
Sbjct: 136 HGFDSNLFVQKAFIHMFSLC-RLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKM 194

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
           LF  M++ G    + PN  T   +++A   S L      + I   +    +  +L + + 
Sbjct: 195 LFIEMEKRG----VSPNSVTLVLMLSAC--SKLKDLEGGKHIYKYINGGIVERNLILENV 248

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
           L+  FA  G    A+ +F+ M  ++V+S   ++ G                         
Sbjct: 249 LIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTG------------------------- 283

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
               +A  G ID +R  F  +  +D VSW  MI G  +   + EA+  F  M+   +   
Sbjct: 284 ----FANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPD 339

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
            F+++S L++CA LG + LG+ +     K  + +D  V NAL+ +Y   G + +  KVF 
Sbjct: 340 EFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFK 399

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            M   D+ +W ++I   A +     EA+  + +M  A  +P+ +T+I +L A +   M +
Sbjct: 400 EMHHKDKFTWTAMIVGLAIN-GHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVE 458

Query: 477 LGHQVH-AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            G     +  +++ +    T    ++   G+ G +++  ++   M  + + + W S++
Sbjct: 459 KGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLL 516



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 137/309 (44%), Gaps = 16/309 (5%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV    +++  +  +G +  A K FD++P+R+ VSW  ++ GY       EA  +F+EM 
Sbjct: 273 DVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQ 332

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
            +    + + + S+L AC   G    + G  V   + K++   D  V N LI MY  C  
Sbjct: 333 MSNVKPDEFTMVSILTACAHLG--ALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKC-G 389

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF- 197
           +   A+++F+E+  +D  +W ++I   +  G       +FS M       S+ P+E T+ 
Sbjct: 390 NVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNM----IEASITPDEITYI 445

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
           G L    ++ ++         ++M  + G+  ++     +V    R G    A ++   M
Sbjct: 446 GVLCACTHAGMVEKGQSF--FISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNM 503

Query: 258 -IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG-----LVNMYAKCGTIDDSR 311
            ++ N +    L+   R  K V    + +     +   NG     L N+YA C   ++ R
Sbjct: 504 PVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLR 563

Query: 312 SVFRFMIGK 320
            V + M+ +
Sbjct: 564 QVRKLMMER 572


>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 232/648 (35%), Positives = 371/648 (57%), Gaps = 13/648 (2%)

Query: 295  NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
            N L++MY KC     +  VF  M  ++ VSW+ ++SG   NG  + ++  F  M R G+ 
Sbjct: 416  NYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY 475

Query: 355  SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
             + F+  + L +C  L  +  G QIHG  LK+G +  V V N+L+ +Y+  G ++   KV
Sbjct: 476  PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKV 535

Query: 415  FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS--PNGVTFINILAAASSF 472
            F  + +   +SWN++I  F  +    S+A+  +  M+ A     P+  T  ++L A SS 
Sbjct: 536  FRRIVDRSLISWNAMIAGFVHA-GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSST 594

Query: 473  SMGKLGHQVHAQVIK--YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
             M   G Q+H  +++  ++  +  TI  +L+  Y KCG +    K F ++ E+   +SW+
Sbjct: 595  GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEK-TMISWS 653

Query: 531  SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
            S+I GY       +AM L   + +   ++D F  ++++   A  A L +G ++ A  V+ 
Sbjct: 654  SLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKL 713

Query: 591  CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
                +  + +++VDMY KCG +D A + F  M +++V SW  +I+GY +HG G K++ +F
Sbjct: 714  PSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIF 773

Query: 651  SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
             +M      PD V ++ VLSACSH+G++ EG + F  + + +G+ P++E ++C+VDLLGR
Sbjct: 774  YEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGR 833

Query: 711  AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
            AG L + +  I+ MPI PN  IW+T+L + CR +    ELG++   +L  ++ +N  NYV
Sbjct: 834  AGRLKEAKHLIDTMPIKPNVGIWQTLL-SLCRVH-GDIELGKEVGKILLRIDAKNPANYV 891

Query: 771  LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
            +++N+Y   G W +   AR+      +KKEAG SWV ++  VH F +G++SHP   +I E
Sbjct: 892  MMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQE 951

Query: 831  KLKELNQKMRDA-GYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR---NSK-LPI 885
             LKE  +++R+  GYV   K  L D++ ESKE+ +  HSEK+A+   L     N K   I
Sbjct: 952  TLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTI 1011

Query: 886  RIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
            R+ KNLRVC DCH   K +SKI     V+RD+ RFH F DG CSCGDY
Sbjct: 1012 RVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1059



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 221/427 (51%), Gaps = 26/427 (6%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNV------VSMN----GLMEGRRKGKEVHGYLIR 284
           SAL+SG    G+   +  +F +M ++ +       S N    GL+    KG ++HG+ ++
Sbjct: 447 SALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLK 506

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
            G   MV VGN LV+MY+KCG I+++  VFR ++ +  +SWN MI+G    G   +A+  
Sbjct: 507 IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDT 566

Query: 345 FCAMRRDGLMS--SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL--DSDVSVSNALLS 400
           F  M+   +      F+L S L +C+S G I  G+QIHG  ++ G    S  +++ +L+ 
Sbjct: 567 FGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVD 626

Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
           LY   GYL    K F  + E   +SW+S+I  +A     V EA+  +  ++      +  
Sbjct: 627 LYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFV-EAMGLFKRLQELNSQIDSF 685

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
              +I+   + F++ + G Q+ A  +K     ET++ N+++  Y KCG +D+ EK FA M
Sbjct: 686 ALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEM 745

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
            + +D +SW  +I+GY  + L  K++ + + M++     D   +  VLSAC+    ++ G
Sbjct: 746 -QLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEG 804

Query: 581 ME-----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMI 634
            E     +   G++  +E      + +VD+  + GR+  A    D MP++ NV  W +++
Sbjct: 805 EELFSKLLETHGIKPRVEH----YACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 860

Query: 635 SGYARHG 641
           S    HG
Sbjct: 861 SLCRVHG 867



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 209/459 (45%), Gaps = 56/459 (12%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           ++   N LI++Y +  +   A K+FD MP+RN VSW+ ++SG+   G    +  +F EM 
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           R G   N +   + L+AC     +  + G+Q+H   LK        V N L+ MY  C  
Sbjct: 471 RQGIYPNEFTFSTNLKACGLL--NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGR 528

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
             + A ++F  I  R LISWN++I+ +   G        F  MQ    +   +P+E+T  
Sbjct: 529 INE-AEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE--RPDEFTLT 585

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGL--LSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           SL+ A  S+ +   Y  +QI   + ++G    S   +  +LV  + + G  + ARK F+Q
Sbjct: 586 SLLKACSSTGM--IYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQ 643

Query: 257 MIQKNVVSMNGLMEGR-----------------------------------------RKG 275
           + +K ++S + L+ G                                          R+G
Sbjct: 644 IKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG 703

Query: 276 KEVHGYLIR--SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           K++    ++  SGL    +V N +V+MY KCG +D++   F  M  KD +SW  +I+G  
Sbjct: 704 KQMQALAVKLPSGL--ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYG 761

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GLDSDV 392
           ++G  ++++  F  M R  +       ++ LS+C+  G I  G+++  + L+  G+   V
Sbjct: 762 KHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRV 821

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVI 430
                ++ L   AG L     +   MP    V  W +++
Sbjct: 822 EHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 860



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 193/400 (48%), Gaps = 28/400 (7%)

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
            SN L+ +Y          KVF  MPE + VSW++++     +  L   ++  + +M R 
Sbjct: 414 TSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKG-SLSLFSEMGRQ 472

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G  PN  TF   L A    +  + G Q+H   +K        + N+L+  Y KCG +++ 
Sbjct: 473 GIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEA 532

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG---QRLDHFTFATVLSA 570
           EK+F R+ + R  +SWN+MI+G++H     KA++  + MMQ     +R D FT  ++L A
Sbjct: 533 EKVFRRIVD-RSLISWNAMIAGFVHAGYGSKALD-TFGMMQEANIKERPDEFTLTSLLKA 590

Query: 571 CASVATLERGMEVHACGVRA---CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           C+S   +  G ++H   VR+   C     + GS LVD+Y KCG +  A + FD +  + +
Sbjct: 591 CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGS-LVDLYVKCGYLFSARKAFDQIKEKTM 649

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            SW+S+I GYA+ G   +A+ LF +++      D      ++   +   L+ +G    K 
Sbjct: 650 ISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG----KQ 705

Query: 688 MSQVYGLIP---QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           M  +   +P   +    + +VD+  + G +D+ E+   +M +  + + W  V+       
Sbjct: 706 MQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVI-----TG 759

Query: 745 CRKTELGRKAANMLFEM-----EPQNAVNYVLLANMYASG 779
             K  LG+K+  + +EM     EP       +L+    SG
Sbjct: 760 YGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSG 799



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 132/267 (49%), Gaps = 13/267 (4%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           LK GF   V + N+L+++Y + G +  A K+F  + DR+ +SW  +++G+ H G  ++A 
Sbjct: 505 LKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKAL 564

Query: 72  KMFKEMVRAGF--LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS--NQTFDGLVSN 127
             F  M  A      + + L S+L+AC   G      G Q+H  +++S  +      ++ 
Sbjct: 565 DTFGMMQEANIKERPDEFTLTSLLKACSSTGM--IYAGKQIHGFLVRSGFHCPSSATITG 622

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ +Y  C      AR+ F++I+ + +ISW+S+I  Y+Q G+ +    LF R+Q     
Sbjct: 623 SLVDLYVKC-GYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ----E 677

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
            + + + +   S+I       L       Q LA+   +GL  +  V +++V  + + G  
Sbjct: 678 LNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL--ETSVLNSVVDMYLKCGLV 735

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRK 274
             A K F +M  K+V+S   ++ G  K
Sbjct: 736 DEAEKCFAEMQLKDVISWTVVITGYGK 762



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 139/292 (47%), Gaps = 21/292 (7%)

Query: 4   AKLFHLQILKHGF--AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
            K  H  +++ GF       +  +L+++YV+ G L SA K FD++ ++  +SW+ ++ GY
Sbjct: 600 GKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGY 659

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
             +G   EA  +FK +      ++ +AL S++    +      + G Q+  L +K     
Sbjct: 660 AQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFAL--LRQGKQMQALAVKLPSGL 717

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V N ++ MY  C    D A + F E++ +D+ISW  +I+ Y + G      ++F  M
Sbjct: 718 ETSVLNSVVDMYLKC-GLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM 776

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
                R++++P+E  + ++++A   S  +  G  L  ++L   +  G+   +   + +V 
Sbjct: 777 ----LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLL---ETHGIKPRVEHYACVVD 829

Query: 240 GFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRK------GKEVHGYLIR 284
              R G    A+ + + M I+ NV     L+   R       GKEV   L+R
Sbjct: 830 LLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLR 881



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 9/173 (5%)

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
            +++  + L+DMY KC     A + FD MP RNV SW++++SG+  +G    +L+LFS+M
Sbjct: 410 LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM 469

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGE 713
              G  P+  TF   L AC     +++G +         G    +E  + +VD+  + G 
Sbjct: 470 GRQGIYPNEFTFSTNLKACGLLNALEKGLQ-IHGFCLKIGFEMMVEVGNSLVDMYSKCGR 528

Query: 714 LDKIEEFINKMPITPNSLI-WRTVLGACCRANCRKTELGRKAANMLFEMEPQN 765
           +++ E+   +  I   SLI W  ++     A       G KA +    M+  N
Sbjct: 529 INEAEKVFRR--IVDRSLISWNAMIAGFVHAG-----YGSKALDTFGMMQEAN 574


>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 226/575 (39%), Positives = 332/575 (57%), Gaps = 6/575 (1%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S L SC +   +  G+Q+HG  L  GL  D  ++  L+ LYA  G +    ++F  MP+ 
Sbjct: 67  SVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKR 126

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           +   WN +I A+A  +     A++ Y  M   G  P+  T+   L A ++    + G +V
Sbjct: 127 NVFLWNVLIRAYA-RDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREV 185

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H +V+  +   +  +   L+  Y KCG +DD   +F R+   RD V WNSMI+ Y  N  
Sbjct: 186 HERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRI-RVRDSVVWNSMIAAYGQNGR 244

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +A++L   M   G      T  + +SA A  A L RG E+H  G R   +    + ++
Sbjct: 245 PMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTS 304

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-P 660
           LVDMY+K G +  A   F+ +  R + SWN+MI GY  HGH D+AL LF++M+++  + P
Sbjct: 305 LVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTP 364

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           D++TFVGVLSAC+H G+V E  + F  M  VY + P ++ F+C+VD+LG AG  ++  + 
Sbjct: 365 DNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDL 424

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           I  MP+ P+S IW  +L  C     +  ELG  A   L E+EP++A NYVLL+N+YA  G
Sbjct: 425 IKGMPMQPDSGIWGALLNGC--KIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSG 482

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
           KWE  A+ RK M    +KK  GCSW+ +K   H F+ GD SHP    IYE+L+ L   M 
Sbjct: 483 KWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGLMS 542

Query: 841 DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHS 899
           DAGY+P T     D+  + K +++  HSE++A+AF +++  S   + + KNLRVC DCH 
Sbjct: 543 DAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDCHV 602

Query: 900 AFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             K IS+IV REI++RD NR+HHF +G+CSC DYW
Sbjct: 603 VIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 182/388 (46%), Gaps = 47/388 (12%)

Query: 192 PNEYT-FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
           PN Y  + S++ +  +S   G+   +Q+   +  +GL  D  + + LV  +A  G   +A
Sbjct: 59  PNSYHHYTSVLQSCVASRSLGTG--RQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHA 116

Query: 251 RKIFEQMIQKNVVSMNGLMEGRRK------------------------------------ 274
           R++F+ M ++NV   N L+    +                                    
Sbjct: 117 RRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAAL 176

Query: 275 -----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
                G+EVH  ++ +   + + V  GLV+MYAKCG +DD+R+VF  +  +DSV WN+MI
Sbjct: 177 LDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMI 236

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
           +   QNG   EA+     M  +G+  +  +L+ST+S+ A    +  G+++HG G + G D
Sbjct: 237 AAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFD 296

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
               +  +L+ +YA +G++     +F  + + + VSWN++I  +        EA+K +  
Sbjct: 297 RQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYG-MHGHFDEALKLFNK 355

Query: 450 MR-RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKC 507
           MR  A  +P+ +TF+ +L+A +   M K   +    ++  Y++         L+   G  
Sbjct: 356 MRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHA 415

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISG 535
           G  ++   +   M  + D   W ++++G
Sbjct: 416 GRFEEAYDLIKGMPMQPDSGIWGALLNG 443



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 174/369 (47%), Gaps = 5/369 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+++HG L+ SGL     +   LV++YA CG +  +R +F  M  ++   WN +I    +
Sbjct: 81  GRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYAR 140

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +G +E AI  +  M   G+   NF+    L +CA+L  +  G+++H   L      D+ V
Sbjct: 141 DGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFV 200

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
              L+ +YA  G +     VF  +   D V WNS+I A+  +   + EA+    DM   G
Sbjct: 201 CAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPM-EALSLCRDMAANG 259

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             P   T ++ ++AA+  +    G ++H    +     +  ++ +L+  Y K G +    
Sbjct: 260 VGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVAR 319

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACAS 573
            +F ++  +R+ VSWN+MI GY  +    +A+ L   M    Q   D+ TF  VLSAC  
Sbjct: 320 VLFEQLM-KRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNH 378

Query: 574 VATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWN 631
              ++   E     V    ++  V   + LVD+    GR + A      MP++ +   W 
Sbjct: 379 GGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWG 438

Query: 632 SMISGYARH 640
           ++++G   H
Sbjct: 439 ALLNGCKIH 447



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 156/354 (44%), Gaps = 29/354 (8%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +  H ++L  G   D  L   L+++Y   G +  A +LFD MP RN   W  ++  Y  
Sbjct: 81  GRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYAR 140

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G    A ++++ MV  G   + +     L+AC        + G +VH  VL ++   D 
Sbjct: 141 DGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAAL--LDLETGREVHERVLGTHWGEDM 198

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V   L+ MY  C    D AR +F+ I  RD + WNS+I+ Y Q G  +    L   M  
Sbjct: 199 FVCAGLVDMYAKC-GCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAA 257

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G    + P   T  S I+AA  +        +++     + G      + ++LV  +A+
Sbjct: 258 NG----VGPTIATLVSTISAAADAAALPRG--RELHGFGWRRGFDRQDKLKTSLVDMYAK 311

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS-GLFDMVAVGNGL----- 297
            G    AR +FEQ++++ +VS N ++     G  +HG+   +  LF+ + V   +     
Sbjct: 312 SGWVQVARVLFEQLMKRELVSWNAMI----CGYGMHGHFDEALKLFNKMRVEAQVTPDNI 367

Query: 298 --VNMYAKC---GTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEA 341
             V + + C   G + +++  F  M+   S+      +  ++  L   G +EEA
Sbjct: 368 TFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEA 421



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 97/179 (54%), Gaps = 8/179 (4%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           + +VL +C +  +L  G ++H   + + L  D V+ + LVD+Y+ CG + +A R FD MP
Sbjct: 65  YTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMP 124

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            RNV+ WN +I  YAR G  + A+ L+  M   G  PD+ T+   L AC+    ++ G +
Sbjct: 125 KRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGRE 184

Query: 684 -HFKSMSQVYGLIPQLEQFSC--MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
            H + +   +G     + F C  +VD+  + G +D      +++ +  +S++W +++ A
Sbjct: 185 VHERVLGTHWG----EDMFVCAGLVDMYAKCGCVDDARAVFDRIRVR-DSVVWNSMIAA 238


>gi|15217470|ref|NP_177298.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169716|sp|Q9C9H9.1|PP114_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71420
 gi|12323734|gb|AAG51830.1|AC016163_19 hypothetical protein; 56014-58251 [Arabidopsis thaliana]
 gi|332197078|gb|AEE35199.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 745

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 240/663 (36%), Positives = 379/663 (57%), Gaps = 32/663 (4%)

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           V + N L+NMYAKCG I  +R VF  M  ++ VSW  +I+G  Q G  +E    F +M  
Sbjct: 96  VILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML- 154

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA---DAGY 407
                + F+L S L+SC        G+Q+HG  LKLGL   + V+NA++S+Y    D   
Sbjct: 155 SHCFPNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAA 210

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
                 VF  +   + V+WNS+I AF     L  +A+  ++ M   G   +  T +NI +
Sbjct: 211 AYEAWTVFEAIKFKNLVTWNSMIAAFQCCN-LGKKAIGVFMRMHSDGVGFDRATLLNICS 269

Query: 468 AASSFS------MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE-MDDCEKIFARM 520
           +    S      + K   Q+H+  +K  +  +T +  AL+  Y +  E   DC K+F  M
Sbjct: 270 SLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEM 329

Query: 521 SERRDEVSWNSMISGY-IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           S  RD V+WN +I+ + +++    +A++L   + Q     D +TF++VL ACA + T   
Sbjct: 330 SHCRDIVAWNGIITAFAVYDP--ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARH 387

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
            + +HA  ++     D V+ ++L+  Y+KCG +D   R FD M  R+V SWNSM+  Y+ 
Sbjct: 388 ALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSL 447

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
           HG  D  L +F +M ++   PD  TF+ +LSACSHAG V+EG + F+SM +    +PQL 
Sbjct: 448 HGQVDSILPVFQKMDIN---PDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLN 504

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            ++C++D+L RA    + EE I +MP+ P++++W  +LG+C +     T LG+ AA+ L 
Sbjct: 505 HYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHG--NTRLGKLAADKLK 562

Query: 760 EM-EPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
           E+ EP N+++Y+ ++N+Y + G + +   + K M+   V+KE   SW  + + VH F +G
Sbjct: 563 ELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASG 622

Query: 819 DESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDL-VSYHSEKIAVAFVL 877
               P+K+ +Y +LK L   +++ GYVP+ + A  D+E E +E+  + +HSEK+A+AF +
Sbjct: 623 GRHRPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAV 682

Query: 878 TRNSKLP------IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
               K        I+IMKN R+C DCH+  K  SK++G+EI++RDSNRFHHF D  CSC 
Sbjct: 683 MEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCN 742

Query: 932 DYW 934
           DYW
Sbjct: 743 DYW 745



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 216/468 (46%), Gaps = 67/468 (14%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------------- 272
           ++ + + L++ +A+ GN  YAR++F+ M ++NVVS   L+ G                  
Sbjct: 95  NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML 154

Query: 273 -------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC---GTIDDS 310
                                GK+VHG  ++ GL   + V N +++MY +C       ++
Sbjct: 155 SHCFPNEFTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEA 214

Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
            +VF  +  K+ V+WN+MI+        ++AI  F  M  DG+     +L++  SS    
Sbjct: 215 WTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKS 274

Query: 371 GWIMLGQ------QIHGEGLKLGLDSDVSVSNALLSLYADA-GYLSRCLKVFFLMPE-HD 422
             ++  +      Q+H   +K GL +   V+ AL+ +Y++     + C K+F  M    D
Sbjct: 275 SDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRD 334

Query: 423 QVSWNSVIGAFA--DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            V+WN +I AFA  D E     A+  +  +R+   SP+  TF ++L A +     +    
Sbjct: 335 IVAWNGIITAFAVYDPE----RAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALS 390

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +HAQVIK     +T + N+L+  Y KCG +D C ++F  M + RD VSWNSM+  Y    
Sbjct: 391 IHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDM-DSRDVVSWNSMLKAY---S 446

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG- 599
           L  +  +++    +     D  TF  +LSAC+    +E G+ +     R+  E    +  
Sbjct: 447 LHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRI----FRSMFEKPETLPQ 502

Query: 600 ----SALVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSMISGYARHGH 642
               + ++DM S+  R   A      MP+  +   W +++    +HG+
Sbjct: 503 LNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGN 550



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 198/423 (46%), Gaps = 64/423 (15%)

Query: 7   FHLQILKHGFAY--DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
            H  +L H + Y  +V L N LIN+Y + G++  A ++FD MP+RN VSW  +++GY   
Sbjct: 81  LHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQA 140

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   E   +F  M+   F  N + L SVL +C+      ++ G QVH L LK        
Sbjct: 141 GNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCR------YEPGKQVHGLALKLGLHCSIY 193

Query: 125 VSNVLIAMYGSCLESTDC--ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
           V+N +I+MYG C +      A  +FE I+ ++L++WNS+I+ +           +F RM 
Sbjct: 194 VANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMH 253

Query: 183 REGFRYSLKPNEYTFGSLITAAY-SSVLSGSYLLQ---QILAMVKKAGLLSDLYVGSALV 238
            +G  +    +  T  ++ ++ Y SS L  + + +   Q+ ++  K+GL++   V +AL+
Sbjct: 254 SDGVGF----DRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALI 309

Query: 239 SGFAR-LGNFYYARKIFEQMIQ-KNVVSMNGLMEG------------------------- 271
             ++  L ++    K+F +M   +++V+ NG++                           
Sbjct: 310 KVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPERAIHLFGQLRQEKLSPDW 369

Query: 272 ---------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                           R    +H  +I+ G      + N L++ YAKCG++D    VF  
Sbjct: 370 YTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDD 429

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M  +D VSWN+M+     +G  +  +  F  M    +   + + I+ LS+C+  G +  G
Sbjct: 430 MDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEG 486

Query: 377 QQI 379
            +I
Sbjct: 487 LRI 489



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 120/538 (22%), Positives = 225/538 (41%), Gaps = 65/538 (12%)

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGL--KLGLDSDVSVSNALLSLYADAGYLSRC 411
           + S  +  +   +CA    ++ G  +H   L        +V ++N L+++YA  G +   
Sbjct: 56  LQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYA 115

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
            +VF  MPE + VSW ++I  +  +     E    +  M    + PN  T  ++L +   
Sbjct: 116 RQVFDTMPERNVVSWTALITGYVQA-GNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCRY 173

Query: 472 FSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE---MDDCEKIFARMSERRDEVS 528
               + G QVH   +K  +     + NA++S YG+C +     +   +F  + + ++ V+
Sbjct: 174 ----EPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAI-KFKNLVT 228

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG------ME 582
           WNSMI+ +    L  KA+ +   M   G   D  T   + S+    + L         ++
Sbjct: 229 WNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQ 288

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKC--GRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
           +H+  V++ L     + +AL+ +YS+      D    F ++   R++ +WN +I+ +A +
Sbjct: 289 LHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY 348

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-----------HAGLVDEGFKH----F 685
              ++A+ LF Q++ +   PD  TF  VL AC+           HA ++  GF       
Sbjct: 349 D-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLN 407

Query: 686 KSMSQVYGLIPQLE---------------QFSCMVDLLGRAGELDKIEEFINKMPITPNS 730
            S+   Y     L+                ++ M+      G++D I     KM I P+S
Sbjct: 408 NSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDS 467

Query: 731 LIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARK 790
             +  +L AC  A   + E G +    +FE +P+        A +     + E  A+A +
Sbjct: 468 ATFIALLSACSHAG--RVEEGLRIFRSMFE-KPETLPQLNHYACVIDMLSRAERFAEAEE 524

Query: 791 AMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK---DLIYEKLKELNQKMRDAGYV 845
            +K+  +  +A   W+ +       +     H       L  +KLKEL +      Y+
Sbjct: 525 VIKQMPMDPDA-VVWIAL-------LGSCRKHGNTRLGKLAADKLKELVEPTNSMSYI 574



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 25/315 (7%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVR-VGDLASASKLFDEMPD-RNSVSWACIVSGYTHK 64
            H   +K G      +   LI VY   + D     KLF EM   R+ V+W  I++ +   
Sbjct: 289 LHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY 348

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
                A  +F ++ +     + Y   SVL+AC   G    +  + +H  V+K     D +
Sbjct: 349 D-PERAIHLFGQLRQEKLSPDWYTFSSVLKACA--GLVTARHALSIHAQVIKGGFLADTV 405

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           ++N LI  Y  C  S D   R+F+++++RD++SWNS++  YS  G   S+  +F +M   
Sbjct: 406 LNNSLIHAYAKC-GSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD-- 462

Query: 185 GFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
                + P+  TF +L++A   +  V  G   L+   +M +K   L  L   + ++   +
Sbjct: 463 -----INPDSATFIALLSACSHAGRVEEG---LRIFRSMFEKPETLPQLNHYACVIDMLS 514

Query: 243 RLGNFYYARKIFEQMIQKN--VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG---- 296
           R   F  A ++ +QM      VV +  L   R+ G    G L    L ++V   N     
Sbjct: 515 RAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYI 574

Query: 297 -LVNMYAKCGTIDDS 310
            + N+Y   G+ +++
Sbjct: 575 QMSNIYNAEGSFNEA 589



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 43/77 (55%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           ++ A   H Q++K GF  D  L N+LI+ Y + G L    ++FD+M  R+ VSW  ++  
Sbjct: 385 ARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKA 444

Query: 61  YTHKGMSNEACKMFKEM 77
           Y+  G  +    +F++M
Sbjct: 445 YSLHGQVDSILPVFQKM 461


>gi|302798571|ref|XP_002981045.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
 gi|300151099|gb|EFJ17746.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
          Length = 833

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 266/837 (31%), Positives = 415/837 (49%), Gaps = 76/837 (9%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H  + +H     +F  N L+N+Y R   L  A K+FD M +R+ VSW  ++S Y
Sbjct: 15  EQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERDVVSWTAMISAY 74

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLV-----LK 116
              G   +A  +F EM  +    NR    ++L AC    P   + G Q+H  V     L+
Sbjct: 75  AQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACD--SPEFLEDGKQIHARVSALQLLE 132

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
           S    D  V+N ++ MY  C E  D A  +F E+  RDLISWN+ I+  ++ GD      
Sbjct: 133 S----DVPVANAVMGMYRKC-ERADLAMAVFSEMRERDLISWNNAIAANAESGDYTFTLA 187

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSS-VLSGSYLLQQILAMVKKAGLLSDLYVGS 235
           L   MQ EG    + P++ TF S + A   S  LS   L+    A+V + G+  D+ +G+
Sbjct: 188 LLKSMQLEG----MAPDKVTFVSALNACIGSRSLSNGRLIH---ALVLERGMEGDVVLGT 240

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM-------------------------- 269
           ALV+ + R G    AR+IF +M ++NVVS N ++                          
Sbjct: 241 ALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVE 300

Query: 270 ----------------EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
                           E   +G+ +H  +    L   + V N LV MY +CG + D+  V
Sbjct: 301 PTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERV 360

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           F  M  +D VSWN MIS   Q+G   E +  F  MR + +     + +  L +CA +  +
Sbjct: 361 FSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDL 420

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG--------YLSRCLKVFFLMPEHDQVS 425
             G+ +H   ++ G  S +SV+NA + LY+            +     +F  M   D +S
Sbjct: 421 DSGRTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVIS 480

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           WN++I  +  +    S A+  +  M   G   N VTF+++L+   S +  + G  +H +V
Sbjct: 481 WNTMITGYVQAGDSFS-ALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRV 539

Query: 486 IKYN--VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
           I     ++++  +  A+++ YGKCGE+D    +F   S R +  SWNSMIS Y  +    
Sbjct: 540 INQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHR-NLASWNSMISAYALHGRAE 598

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
           +A +L   M + G   D  TF T+L+AC +   +  G  +HA  + + LE D V+ +ALV
Sbjct: 599 QAFDLSERMRREGVLPDRVTFITLLNACVAGGAVRHGKMIHARIIDSGLEKDTVVANALV 658

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
           + YSKCG +D A+  F  +  R+V SWN +I+G+A +GH  +AL     M+ DG  PD +
Sbjct: 659 NFYSKCGNLDTATSLFGALDYRDVVSWNGIIAGFAHNGHAREALKSMWLMQQDGVRPDAI 718

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TF+ +LSA SHAG + +G   F SM+  + L   +E + CM+DLLGRAG +   E F++ 
Sbjct: 719 TFLTILSASSHAGFLRQGGDDFVSMAVDHELERGVEHYGCMIDLLGRAGRIGDAEYFVSA 778

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           M      + W T+L AC        E  ++ A  + EM PQ++  YV L+N+YA+ G
Sbjct: 779 MRDEDKEVSWMTLLSACEVHG--DEERAKRVAGSIVEMNPQHSSAYVALSNLYATCG 833



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/421 (33%), Positives = 222/421 (52%), Gaps = 12/421 (2%)

Query: 267 GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
           G+     +G+ VHG++ R      +  GN LVNMY +C ++D++R VF  M  +D VSW 
Sbjct: 9   GISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERDVVSWT 68

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE--GL 384
            MIS   Q G   +A+  F  M    L  +  + ++ L +C S  ++  G+QIH     L
Sbjct: 69  AMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHARVSAL 128

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           +L L+SDV V+NA++ +Y         + VF  M E D +SWN+ I A A+S    +  +
Sbjct: 129 QL-LESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAES-GDYTFTL 186

Query: 445 KYYLDMRRAGWSPNGVTFINILAA---ASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
                M+  G +P+ VTF++ L A   + S S G+L   +HA V++  +  +  +  AL+
Sbjct: 187 ALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRL---IHALVLERGMEGDVVLGTALV 243

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLD 560
           + YG+CG ++   +IF RM E R+ VSWN+M++    N    +A+ L   M+        
Sbjct: 244 TMYGRCGCLESAREIFHRMPE-RNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPT 302

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
             +F TVL+A  +   L  G  +HA      L   + + +ALV MY +CG +  A R F 
Sbjct: 303 RVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFS 362

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
            M  R++ SWN+MIS YA+ G   + + LF +M+ +   PD +TF+  L AC+    +D 
Sbjct: 363 AMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDLDS 422

Query: 681 G 681
           G
Sbjct: 423 G 423



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 204/414 (49%), Gaps = 15/414 (3%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           + +C   G +  G+++HG   +   D  +   N L+++Y     L    KVF  M E D 
Sbjct: 5   MRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERDV 64

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSW ++I A+A +     +A+  + +M  +   PN VTF+ +L A  S    + G Q+HA
Sbjct: 65  VSWTAMISAYAQT-GHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHA 123

Query: 484 QVIKYN-VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
           +V     + ++  + NA++  Y KC   D    +F+ M E RD +SWN+ I+    +   
Sbjct: 124 RVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRE-RDLISWNNAIAANAESGDY 182

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
              + L+  M   G   D  TF + L+AC    +L  G  +HA  +   +E DVV+G+AL
Sbjct: 183 TFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTAL 242

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PD 661
           V MY +CG ++ A   F  MP RNV SWN+M++    + H  +A+ LF +M     + P 
Sbjct: 243 VTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPT 302

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            V+F+ VL+A +    + EG +   +M Q   L+ Q+E  + +V + GR G +   E   
Sbjct: 303 RVSFITVLNAVTTPEALAEG-RRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVF 361

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME----PQNAVNYVL 771
           + M    + + W  ++ A  ++      L R+  N+   M     P + + +++
Sbjct: 362 SAME-RRDLVSWNAMISAYAQSG-----LAREVVNLFHRMRAERVPPDRITFLM 409



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 67/118 (56%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +A ++ AC     LE+G  VH    R   +  +  G+ LV+MY +C  +D A + FD M 
Sbjct: 1   YARLMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMR 60

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
            R+V SW +MIS YA+ GH  +AL LF++M      P+ VTF+ +L AC     +++G
Sbjct: 61  ERDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDG 118


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 247/694 (35%), Positives = 381/694 (54%), Gaps = 41/694 (5%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLV-NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           K+VH  ++RS L    ++   LV +  A   ++D + SVF  +   ++   N  +  L +
Sbjct: 40  KQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSR 99

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +   E+ ++ +  MR  GL    FS    L + + +  ++ G +IHG   KLG DSD  V
Sbjct: 100 SEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFV 159

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
              L+ +YA  G ++    +F  M   D V+W+ +I  +  S  L ++A+  + +M+   
Sbjct: 160 QTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQS-GLFNDALLLFEEMKNYN 218

Query: 455 WSPNGVTFINILAA---ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             P+ +    +L+A   A + S GK+   +H  +++ N+  +  +++AL++ Y  CG MD
Sbjct: 219 VEPDEMMLSTVLSACGRAGNLSYGKM---IHDFIMENNIVVDPHLQSALVTMYASCGSMD 275

Query: 512 DCEKIFARMSER------------------------------RDEVSWNSMISGYIHNEL 541
               +F +M+ +                              +D V W++MISGY  ++ 
Sbjct: 276 LALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDS 335

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +A+NL   M   G + D  T  +V++ACA +  L++   +H    +      + I +A
Sbjct: 336 PQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNA 395

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L++MY+KCG ++ A R FD MP +NV SW  MIS +A HG    AL  F QM+ +   P+
Sbjct: 396 LIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPN 455

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            +TFVGVL ACSHAGLV+EG K F SM   + + P+   + CMVDL GRA  L +  E +
Sbjct: 456 GITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELV 515

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
             MP+ PN +IW +++ A CR +  + ELG  AA  L E++P +   +V L+N+YA   +
Sbjct: 516 EAMPLAPNVIIWGSLMAA-CRVH-GEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARR 573

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           WEDV + RK MK   + KE GCS   + + +H F+  D SH   D IYEKL E+  K++ 
Sbjct: 574 WEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKL 633

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRN-SKLPIRIMKNLRVCGDCHSA 900
            GY P T   L DLE E K+++V +HSEK+A+ + L R+ +   IRI+KNLRVC DCH+ 
Sbjct: 634 VGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRVCEDCHTF 693

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            K  SK+  REIV+RD  RFHH+ DG CSC DYW
Sbjct: 694 IKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727



 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 115/472 (24%), Positives = 229/472 (48%), Gaps = 43/472 (9%)

Query: 73  MFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAM 132
           +++ M   G  ++R++   +L+A           G+++H L  K     D  V   L+ M
Sbjct: 109 VYERMRTQGLAVDRFSFPPLLKALSRV--KSLVEGLEIHGLAAKLGFDSDPFVQTGLVRM 166

Query: 133 YGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKP 192
           Y +C    + AR +F+++  RD+++W+ +I  Y Q G       LF  M+     Y+++P
Sbjct: 167 YAACGRIAE-ARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMK----NYNVEP 221

Query: 193 NEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           +E    ++++A   +  LS   ++      + +  ++ D ++ SALV+ +A  G+   A 
Sbjct: 222 DEMMLSTVLSACGRAGNLSYGKMIHDF---IMENNIVVDPHLQSALVTMYASCGSMDLAL 278

Query: 252 KIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
            +FE+M  KN+V+   ++ G                             Y+K G I+++R
Sbjct: 279 NLFEKMTPKNLVASTAMVTG-----------------------------YSKLGQIENAR 309

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           SVF  M+ KD V W+ MISG  ++   +EA+  F  M+  G+     +++S +++CA LG
Sbjct: 310 SVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLG 369

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
            +   + IH    K G    + ++NAL+ +YA  G L R  ++F  MP  + +SW  +I 
Sbjct: 370 ALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMIS 429

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV-HAQVIKYNV 490
           AFA        A++++  M      PNG+TF+ +L A S   + + G ++ ++ + ++N+
Sbjct: 430 AFA-MHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNI 488

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
             +      ++  +G+   + +  ++   M    + + W S+++   +H E+
Sbjct: 489 TPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEI 540



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 191/425 (44%), Gaps = 43/425 (10%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +G E+HG   + G      V  GLV MYA CG I ++R +F  M  +D V+W+ MI G  
Sbjct: 140 EGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYC 199

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           Q+G + +A++ F  M+   +      L + LS+C   G +  G+ IH   ++  +  D  
Sbjct: 200 QSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPH 259

Query: 394 VSNALLSLYADAGYLSRCLK-------------------------------VFFLMPEHD 422
           + +AL+++YA  G +   L                                VF  M + D
Sbjct: 260 LQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKD 319

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
            V W+++I  +A+S++   EA+  + +M+  G  P+ VT ++++ A +          +H
Sbjct: 320 LVCWSAMISGYAESDS-PQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIH 378

Query: 483 AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
             V K        I NAL+  Y KCG ++   +IF +M  R++ +SW  MIS +  +   
Sbjct: 379 LFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMP-RKNVISWTCMISAFAMHGDA 437

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV----VI 598
             A+     M       +  TF  VL AC+    +E G ++    +    E ++    V 
Sbjct: 438 GSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMIN---EHNITPKHVH 494

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
              +VD++ +   +  A    + MP+  NV  W S+++  A   HG+  L  F+  +L  
Sbjct: 495 YGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMA--ACRVHGEIELGEFAAKRLLE 552

Query: 658 PLPDH 662
             PDH
Sbjct: 553 LDPDH 557



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 199/448 (44%), Gaps = 59/448 (13%)

Query: 13  KHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACK 72
           K GF  D F+   L+ +Y   G +A A  +FD+M  R+ V+W+ ++ GY   G+ N+A  
Sbjct: 150 KLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALL 209

Query: 73  MFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAM 132
           +F+EM       +   L +VL AC   G     +G  +H  ++++N   D  + + L+ M
Sbjct: 210 LFEEMKNYNVEPDEMMLSTVLSACGRAG--NLSYGKMIHDFIMENNIVVDPHLQSALVTM 267

Query: 133 YGSC------------------------------LESTDCARRIFEEIETRDLISWNSII 162
           Y SC                              L   + AR +F ++  +DL+ W+++I
Sbjct: 268 YASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMI 327

Query: 163 SVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAM 221
           S Y++         LF+ MQ  G    +KP++ T  S+ITA A+   L  +   + I   
Sbjct: 328 SGYAESDSPQEALNLFNEMQSLG----IKPDQVTMLSVITACAHLGALDQA---KWIHLF 380

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-RRKGKEVHG 280
           V K G    L + +AL+  +A+ G+   AR+IF++M +KNV+S   ++      G     
Sbjct: 381 VDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSA 440

Query: 281 YLIRSGLFDMVAVGNGLV---NMYA--KCGTIDDSRSVFRFMIGKDSVS-----WNTMIS 330
                 + D     NG+     +YA    G +++ R +F  MI + +++     +  M+ 
Sbjct: 441 LRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVD 500

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
              +     EA+    AM    L  +     S +++C   G I LG+      L+L  D 
Sbjct: 501 LFGRANLLREALELVEAM---PLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDH 557

Query: 391 D---VSVSN--ALLSLYADAGYLSRCLK 413
           D   V +SN  A    + D G + + +K
Sbjct: 558 DGAHVFLSNIYAKARRWEDVGQVRKLMK 585



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 148/354 (41%), Gaps = 47/354 (13%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVS----------- 53
           K+ H  I+++    D  L + L+ +Y   G +  A  LF++M  +N V+           
Sbjct: 243 KMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKL 302

Query: 54  --------------------WACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVL 93
                               W+ ++SGY       EA  +F EM   G   ++  + SV+
Sbjct: 303 GQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVI 362

Query: 94  RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
            AC   G         +H  V K+       ++N LI MY  C  S + ARRIF+++  +
Sbjct: 363 TACAHLG--ALDQAKWIHLFVDKNGFGGALPINNALIEMYAKC-GSLERARRIFDKMPRK 419

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF-GSLITAAYSSVLSGS 212
           ++ISW  +IS ++  GD  S  + F +M+ E    +++PN  TF G L   +++ ++   
Sbjct: 420 NVISWTCMISAFAMHGDAGSALRFFHQMEDE----NIEPNGITFVGVLYACSHAGLVEEG 475

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNVVSMNGLMEG 271
              +   +M+ +  +         +V  F R      A ++ E M +  NV+    LM  
Sbjct: 476 R--KIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAA 533

Query: 272 RRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFRFMIGK 320
            R   E+  G      L ++    +G    L N+YAK    +D   V + M  K
Sbjct: 534 CRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHK 587



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 50/97 (51%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  HL + K+GF   + + N LI +Y + G L  A ++FD+MP +N +SW C++S +  
Sbjct: 374 AKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAM 433

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G +  A + F +M       N      VL AC   G
Sbjct: 434 HGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAG 470


>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
 gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 231/589 (39%), Positives = 324/589 (55%), Gaps = 40/589 (6%)

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           QIH   L+ GL  +  ++  L   YA  G L   + VF    E +  S++++I +   S 
Sbjct: 65  QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSR 124

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
            L   A  YY  M   G  PN  TF ++L + S  S    G  +H Q IK  + ++  + 
Sbjct: 125 -LFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLES----GKVLHCQAIKLGLGSDLYVR 179

Query: 498 NAL-------------------------------LSCYGKCGEMDDCEKIFARMSERRDE 526
             L                               L+CY K GE+D    +F  M ER D 
Sbjct: 180 TGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKER-DV 238

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           V WN MI GY  + +  +++ L   M+      +  T   VLSAC  +  LE G  +H+ 
Sbjct: 239 VCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSY 298

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
                ++ +V +G+AL+DMYSKCG ++ A   FD +  ++V +WNSMI GYA HG    A
Sbjct: 299 IENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHA 358

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           L LF +M   G  P  +TF+G+LSAC H GLV+EG   F+ M   YG+ P++E + CMV+
Sbjct: 359 LQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVN 418

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           LLGRAG L++    +  M I  + ++W T+LG CCR +    +LG + A  L + +  N+
Sbjct: 419 LLGRAGHLEEAYGLVKNMTIAADPVLWGTLLG-CCRLHV-NIKLGEEIAKFLVDQKLANS 476

Query: 767 VNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKD 826
             YVLL+NMYA+ G WE VAK R  MKE  ++KE GCS + + + VH FVAG+  HP+  
Sbjct: 477 GTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSK 536

Query: 827 LIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPI 885
            IY  L E+N  ++  GY PQT   L DL  E KE  +  HSEK+A+AF +++      +
Sbjct: 537 EIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTV 596

Query: 886 RIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +I+KNLRVC DCH+  K IS+I GR+IV+RD NRFHHF DG CSCGDYW
Sbjct: 597 KIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 205/428 (47%), Gaps = 44/428 (10%)

Query: 108 MQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQ 167
           +Q+H  +L+     + +++  L   Y + L   DC+  +F   +  ++ S+++II  + Q
Sbjct: 64  LQIHASLLRRGLYHNPILNFKLQRSYAA-LGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQ 122

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
                  F  +S+M   G    ++PN +TF S++ +   S+ SG  L  Q +    K GL
Sbjct: 123 SRLFDRAFGYYSQMLSCG----VEPNAFTFSSVLKSC--SLESGKVLHCQAI----KLGL 172

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGL 287
            SDLYV + LV  +AR G+   AR++F++M ++++VS+  ++                  
Sbjct: 173 GSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTML------------------ 214

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
                        Y+K G +D +RS+F  M  +D V WN MI G  Q+G   E++  F  
Sbjct: 215 -----------TCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRR 263

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M     + +  ++++ LS+C  LG +  G+ IH      G+  +V V  AL+ +Y+  G 
Sbjct: 264 MLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGS 323

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           L     VF  + + D V+WNS+I  +A        A++ + +M   G  P  +TFI IL+
Sbjct: 324 LEDARLVFDRIRDKDVVAWNSMIVGYA-MHGFSQHALQLFEEMTETGHKPTDITFIGILS 382

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRD 525
           A     + + G     ++++     E  IE+   +++  G+ G +++   +   M+   D
Sbjct: 383 ACGHGGLVEEGRSFF-RLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAAD 441

Query: 526 EVSWNSMI 533
            V W +++
Sbjct: 442 PVLWGTLL 449



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 110/466 (23%), Positives = 206/466 (44%), Gaps = 77/466 (16%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +L+ G  ++  L   L   Y  +G L  +  +F+   + N  S++ I+  +    +
Sbjct: 66  IHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRL 125

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLK---------- 116
            + A   + +M+  G   N +   SVL++C        + G  +HC  +K          
Sbjct: 126 FDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS------LESGKVLHCQAIKLGLGSDLYVR 179

Query: 117 ---------------SNQTFDGLVSNVLIAMYG-----SCLESTDCARRIFEEIETRDLI 156
                          + Q FD +    L+++       S +   D AR +FE ++ RD++
Sbjct: 180 TGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVV 239

Query: 157 SWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYL 214
            WN +I  Y+Q G      KLF RM          PNE T  ++++A     ++ SG + 
Sbjct: 240 CWNVMIGGYAQSGVPNESLKLFRRM----LVAKAIPNEVTVLAVLSACGQLGALESGRW- 294

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK 274
              I + ++  G+  +++VG+AL+  +++ G+   AR +F+++  K+VV+ N ++     
Sbjct: 295 ---IHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMI----V 347

Query: 275 GKEVHGYLIRS-GLF-DMVAVGN--------GLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
           G  +HG+   +  LF +M   G+        G+++     G +++ RS FR M  K  + 
Sbjct: 348 GYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIE 407

Query: 325 -----WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW-IMLGQQ 378
                +  M++ L + G  EEA      + ++  ++++  L  TL  C  L   I LG++
Sbjct: 408 PKIEHYGCMVNLLGRAGHLEEAY----GLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEE 463

Query: 379 IHGEGLKLGLDSDVSVSNA---LLSLYADAGYLSRCLKVFFLMPEH 421
           I     K  +D  ++ S     L ++YA  G      K+  LM EH
Sbjct: 464 I----AKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEH 505



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 16/218 (7%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           FA+++    SVA L   +++HA  +R  L  + ++   L   Y+  GR+D +   F+   
Sbjct: 50  FASLIDKSKSVAHL---LQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFD 106

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
             NV+S++++I  + +    D+A   +SQM   G  P+  TF  VL +CS      E  K
Sbjct: 107 EPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSL-----ESGK 161

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
                +   GL   L   + +VD+  R G++    +  +KMP    SL+  T +  C   
Sbjct: 162 VLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMP--ERSLVSLTTMLTC--- 216

Query: 744 NCRKTELGRKAANMLFE-MEPQNAVNYVLLANMYASGG 780
             +  EL +  A  LFE M+ ++ V + ++   YA  G
Sbjct: 217 YSKMGELDK--ARSLFEGMKERDVVCWNVMIGGYAQSG 252



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 46/99 (46%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H  I   G   +V +   LI++Y + G L  A  +FD + D++ V+W  ++ GY
Sbjct: 290 ESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGY 349

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G S  A ++F+EM   G          +L AC   G
Sbjct: 350 AMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGG 388


>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
 gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/665 (35%), Positives = 370/665 (55%), Gaps = 49/665 (7%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYA--KCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           K++H  +++ GL     +   L++  A     ++D +  +FR+    D    NT+I GL 
Sbjct: 22  KQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNPDVFMHNTLIRGLY 81

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
           ++   +++++ F  MRR+     + FS    + + A+L  + +G Q+H + L  GLD+ +
Sbjct: 82  ESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQALVHGLDTHL 141

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V   L+S+Y + G++    KVF  MPE + ++WN+++ A                   R
Sbjct: 142 FVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACC-----------------R 184

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G    G    +++   +  S                        N +L+ Y K GE++ 
Sbjct: 185 GGDMKGGRELFDLMPVRNLMSW-----------------------NVMLAGYTKAGELEL 221

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
             ++F  M   +D+VSW++MI G+ HN    +A +    + ++G R +  +   VLSACA
Sbjct: 222 AREMFLEMP-MKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACA 280

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD-LMPVRNVYSWN 631
               LE G  +H    ++ L + V + +AL+D YSKCG +  A   F+ +M  RN+ SW 
Sbjct: 281 QAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWT 340

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           SM++  A HGHG++A+ +F +M+  G  PD + F+ +L ACSHAGLV++G ++F  M  +
Sbjct: 341 SMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGM 400

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
           Y + P +E + CMVDL GRAG+L K  EF+ +MPI   ++IWRT+LGAC        +L 
Sbjct: 401 YNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHG--DVKLA 458

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
            +    L E++P N+ ++VLL+N YA  GKW+D A  R++M E  + K  G S + +   
Sbjct: 459 EQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKI 518

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMR-DAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
           ++ F+AG + +   +  Y+KLKE+ +++R + GYVP+    L D+E E KE  VS HSEK
Sbjct: 519 MYTFLAGTKQYKITEEAYKKLKEIIRRLRVEGGYVPEIGRVLHDIEEEEKEGSVSVHSEK 578

Query: 871 IAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCS 929
           +AVAF + R  K   IRI+KNLR+C DCH+  K IS+I   EIV+RD +RFH F DG CS
Sbjct: 579 LAVAFGIARLCKGRTIRIVKNLRICRDCHAVMKLISQIYKVEIVVRDRSRFHSFKDGYCS 638

Query: 930 CGDYW 934
           C DYW
Sbjct: 639 CRDYW 643



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 217/438 (49%), Gaps = 27/438 (6%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCL-ESTDCARRIFEEIETRDLISWNSII-SVYS 166
           Q+H  VLK     D  ++  L+      L +S D A R+F      D+   N++I  +Y 
Sbjct: 23  QIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNPDVFMHNTLIRGLYE 82

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKK 224
                 S+ K F  M+R  F     P+ ++F  ++ AA +  SV  G  L  Q L     
Sbjct: 83  SDRPQDSLLK-FIEMRRNSFS---PPDSFSFAFIVKAAANLRSVRVGIQLHCQALV---- 134

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIR 284
            GL + L+VG+ L+S +   G   +ARK+F++M + N ++ N ++    +G ++ G    
Sbjct: 135 HGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKG---G 191

Query: 285 SGLFDMVAVGN-----GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
             LFD++ V N      ++  Y K G ++ +R +F  M  KD VSW+TMI G   NG +E
Sbjct: 192 RELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFE 251

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           EA   F  ++R G+  +  SL   LS+CA  G +  G+ +HG   K GL   VSV+NALL
Sbjct: 252 EAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALL 311

Query: 400 SLYADAGYLSRCLKVF-FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
             Y+  G +     VF  +M E + VSW S++ A A       EA+  +  M  +G  P+
Sbjct: 312 DTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALA-MHGHGEEAIGIFHKMEESGIRPD 370

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANETTIEN--ALLSCYGKCGEMDDCEK 515
            + FI++L A S   + + G +   ++   YN+  E +IE+   ++  YG+ G++    +
Sbjct: 371 EIAFISLLYACSHAGLVEQGCEYFDKMKGMYNI--EPSIEHYGCMVDLYGRAGQLQKAYE 428

Query: 516 IFARMSERRDEVSWNSMI 533
              +M      + W +++
Sbjct: 429 FVCQMPIPCTAIIWRTLL 446



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 122/485 (25%), Positives = 214/485 (44%), Gaps = 34/485 (7%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLIN-VYVRVGD-LASASKLFDEMPDRNSVSWACIVSGYT 62
           K  H  +LK G   D F+   L++   + + D L  A +LF   P+ +      ++ G  
Sbjct: 22  KQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNPDVFMHNTLIRGLY 81

Query: 63  HKGMSNEACKMFKEMVRAGF-LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                 ++   F EM R  F   + ++   +++A         + G+Q+HC  L      
Sbjct: 82  ESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANL--RSVRVGIQLHCQALVHGLDT 139

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V   LI+MYG C      AR++F+E+   + I+WN++++   + GD     +LF  M
Sbjct: 140 HLFVGTTLISMYGEC-GFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELFDLM 198

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
                R  +  N      ++ A Y+         +  L M  K     D    S ++ GF
Sbjct: 199 P---VRNLMSWN------VMLAGYTKAGELELAREMFLEMPMK-----DDVSWSTMIVGF 244

Query: 242 ARLGNFYYARKIFEQMIQK----NVVSMNGLMEGRRK------GKEVHGYLIRSGLFDMV 291
           A  G F  A   F ++ +K    N  S+ G++    +      GK +HG++ +SGL  +V
Sbjct: 245 AHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIV 304

Query: 292 AVGNGLVNMYAKCGTIDDSRSVF-RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           +V N L++ Y+KCG +  ++ VF R M  ++ VSW +M++ L  +G  EEAI  F  M  
Sbjct: 305 SVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEE 364

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GLDSDVSVSNALLSLYADAGYLS 409
            G+     + IS L +C+  G +  G +   +   +  ++  +     ++ LY  AG L 
Sbjct: 365 SGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQ 424

Query: 410 RCLKVFFLMP-EHDQVSWNSVIGAFA-DSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +  +    MP     + W +++GA +   +  ++E VK  L       S + V   N  A
Sbjct: 425 KAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAYA 484

Query: 468 AASSF 472
            A  +
Sbjct: 485 VAGKW 489



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 161/371 (43%), Gaps = 62/371 (16%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +LF L  +++  +++V L       Y + G+L  A ++F EMP ++ VSW+ ++ G+ H 
Sbjct: 193 ELFDLMPVRNLMSWNVMLAG-----YTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHN 247

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   EA   F+E+ R G   N  +L  VL AC + G    +FG  +H  + KS   +   
Sbjct: 248 GYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAG--ALEFGKILHGFIEKSGLAWIVS 305

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEI-ETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           V+N L+  Y  C  +   A+ +FE I   R+++SW S+++  +  G       +F +M+ 
Sbjct: 306 VNNALLDTYSKC-GNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEE 364

Query: 184 EGFRYSLKPNEYTFGSLITAA-----------YSSVLSGSYLLQQILAMVKKAGLLSDLY 232
            G R    P+E  F SL+ A            Y   + G Y    I   ++  G + DLY
Sbjct: 365 SGIR----PDEIAFISLLYACSHAGLVEQGCEYFDKMKGMY---NIEPSIEHYGCMVDLY 417

Query: 233 VGSALVSGFARLGNFYYARKIFEQM-------IQKNVV---SMNGLMEGRRKGKEVHGYL 282
                     R G    A +   QM       I + ++   SM+G ++   + KE    L
Sbjct: 418 ---------GRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSEL 468

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK---DSVSWN---------TMIS 330
             +   D V     L N YA  G   D+ SV R M  +    +  W+         T ++
Sbjct: 469 DPNNSSDHVL----LSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLA 524

Query: 331 GLDQNGCYEEA 341
           G  Q    EEA
Sbjct: 525 GTKQYKITEEA 535



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 133/293 (45%), Gaps = 46/293 (15%)

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS-CYGKCGEMDDCEK 515
           P  ++ +NI  + ++F       Q+HA V+K  + ++  I   LL  C     +  D   
Sbjct: 6   PLCLSLLNICKSLTTFK------QIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYAC 59

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ--RLDHFTFATVLSACAS 573
              R +   D    N++I G   ++  P+   L +  M+R      D F+FA ++ A A+
Sbjct: 60  RLFRYTPNPDVFMHNTLIRGLYESDR-PQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAAN 118

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR---------------- 617
           + ++  G+++H   +   L+  + +G+ L+ MY +CG + +A +                
Sbjct: 119 LRSVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAM 178

Query: 618 ---------------FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
                           FDLMPVRN+ SWN M++GY + G     L L  +M L+ P+ D 
Sbjct: 179 VTACCRGGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGE----LELAREMFLEMPMKDD 234

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD 715
           V++  ++   +H G  +E F  F+ + Q  G+ P     + ++    +AG L+
Sbjct: 235 VSWSTMIVGFAHNGYFEEAFSFFREL-QRKGMRPNETSLTGVLSACAQAGALE 286


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/576 (39%), Positives = 336/576 (58%), Gaps = 7/576 (1%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S L+ C S   I  GQ++H   +K      V +   L+ LY     L     +F  MP+ 
Sbjct: 67  SILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQR 126

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           + VSW ++I A++       EA+  +++M R+   PN  TF  IL +       + G Q+
Sbjct: 127 NVVSWTAMISAYSQ-RGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQI 185

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H+  IK N  +   + ++LL  Y K G + D   +F  + ER D V+  ++ISGY    L
Sbjct: 186 HSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPER-DVVACTAIISGYAQMGL 244

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +A+ L   +   G   +  T+A+VL+A + +A L  G +VH+  +R+     VV+ ++
Sbjct: 245 DEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNS 304

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-P 660
           L+DMYSKCG + YA R FD MP R   SWN+M+ GY++HG   + L LF  M+ +  + P
Sbjct: 305 LIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKP 364

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSM-SQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           D +T++ VLS CSH  L D G + F +M +   G+ P +  + C+VDLLGRAG +++  +
Sbjct: 365 DSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFD 424

Query: 720 FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASG 779
           FI KMP  P + IW ++LG+C R +    E+G      L E+EP+NA NYV+L+N+YAS 
Sbjct: 425 FIKKMPFVPTAAIWGSLLGSC-RVH-SDVEIGIIVGQKLLELEPENAGNYVILSNLYASA 482

Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
           GKWED+   R  M+E  V KE G SWV +   VH F A D +HP ++ +  K+KEL+ K 
Sbjct: 483 GKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIKF 542

Query: 840 RDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCH 898
           ++ GYVP     L+D++ E KE ++  HSEK+A+AF L    +   IR++KNLR+C DCH
Sbjct: 543 KEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCH 602

Query: 899 SAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           S  KF+S++  R ++LRD NRFH+   G CSCGDYW
Sbjct: 603 SFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 203/403 (50%), Gaps = 10/403 (2%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R+G+ VH ++I++     V +   L+ +Y KC  + D+R +F  M  ++ VSW  MIS  
Sbjct: 79  REGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAY 138

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC-ASLGWIMLGQQIHGEGLKLGLDSD 391
            Q G   EA+  F  M R     ++F+  + L+SC  SLG+   G+QIH   +K   +S 
Sbjct: 139 SQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGF-ETGRQIHSIAIKRNYESH 197

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           + V ++LL +YA +G +     VF  +PE D V+  ++I  +A    L  EA+K +  ++
Sbjct: 198 MFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQM-GLDEEALKLFRQLQ 256

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             G + N VT+ ++L A S  +    G QVH+ V++    +   + N+L+  Y KCG + 
Sbjct: 257 IEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVC 316

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSA 570
              +IF  M ER   +SWN+M+ GY  + +  + + L   M +  + + D  T+  VLS 
Sbjct: 317 YARRIFDSMPERTC-ISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSG 375

Query: 571 CASVATLERGMEVHACGV--RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP-VRNV 627
           C+     + G+E+    V  +  +E D+     +VD+  + GR++ A  F   MP V   
Sbjct: 376 CSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTA 435

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
             W S++ G  R  H D  + +    KL    P++     +LS
Sbjct: 436 AIWGSLL-GSCR-VHSDVEIGIIVGQKLLELEPENAGNYVILS 476



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 147/276 (53%), Gaps = 15/276 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H  ++K  +   V+L   LI +Y +   L  A  +FDEMP RN VSW  ++S Y
Sbjct: 79  REGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAY 138

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           + +G + EA  +F EM+R+    N +   ++L +C   G  GF+ G Q+H + +K N   
Sbjct: 139 SQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCY--GSLGFETGRQIHSIAIKRNYES 196

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V + L+ MY       D A  +F  +  RD+++  +IIS Y+Q G      KLF ++
Sbjct: 197 HMFVGSSLLDMYAKSGRICD-AHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQL 255

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL---QQILAMVKKAGLLSDLYVGSALV 238
           Q EG    +  N  T+ S++TA     LSG   L   +Q+ + V ++G  S + + ++L+
Sbjct: 256 QIEG----MNSNSVTYASVLTA-----LSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLI 306

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK 274
             +++ GN  YAR+IF+ M ++  +S N ++ G  K
Sbjct: 307 DMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSK 342



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 152/327 (46%), Gaps = 16/327 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H   +K  +   +F+ ++L+++Y + G +  A  +F  +P+R+ V+   I+SGY
Sbjct: 180 ETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGY 239

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G+  EA K+F+++   G   N     SVL A    G +    G QVH  VL+S Q  
Sbjct: 240 AQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALS--GLAALNHGKQVHSHVLRSGQYS 297

Query: 122 DGLVSNVLIAMYGSCLESTDC-ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
             ++ N LI MY  C     C ARRIF+ +  R  ISWN+++  YS+ G    V +LF  
Sbjct: 298 YVVLLNSLIDMYSKC--GNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKL 355

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVK-KAGLLSDLYVGSALVS 239
           M+ E     +KP+  T+ ++++      L     L+    MV  K G+  D+     +V 
Sbjct: 356 MREEN---KVKPDSITYLAVLSGCSHGQLE-DMGLEIFYNMVNGKDGIEPDIGHYGCVVD 411

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR-RKGKEVH-GYLIRSGLFDMVAVGNG- 296
              R G    A    ++M      ++ G + G  R   +V  G ++   L ++     G 
Sbjct: 412 LLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGN 471

Query: 297 ---LVNMYAKCGTIDDSRSVFRFMIGK 320
              L N+YA  G  +D R++   M  K
Sbjct: 472 YVILSNLYASAGKWEDMRNIRDLMQEK 498



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 161/322 (50%), Gaps = 17/322 (5%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKN-----------VVSMNGLMEGRRKGKEVHGYLI 283
           +A++S +++ G  + A  +F +M++ +           + S  G + G   G+++H   I
Sbjct: 132 TAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSL-GFETGRQIHSIAI 190

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
           +      + VG+ L++MYAK G I D+  VF  +  +D V+   +ISG  Q G  EEA+ 
Sbjct: 191 KRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALK 250

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            F  ++ +G+ S++ +  S L++ + L  +  G+Q+H   L+ G  S V + N+L+ +Y+
Sbjct: 251 LFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYS 310

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG-WSPNGVTF 462
             G +    ++F  MPE   +SWN+++  ++    +  E ++ +  MR      P+ +T+
Sbjct: 311 KCGNVCYARRIFDSMPERTCISWNAMLVGYS-KHGMAREVLELFKLMREENKVKPDSITY 369

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARM 520
           + +L+  S   +  +G ++   ++      E  I +   ++   G+ G +++      +M
Sbjct: 370 LAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKM 429

Query: 521 SERRDEVSWNSMI-SGYIHNEL 541
                   W S++ S  +H+++
Sbjct: 430 PFVPTAAIWGSLLGSCRVHSDV 451


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 250/716 (34%), Positives = 392/716 (54%), Gaps = 21/716 (2%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKN-----------VVSMNGLMEGRRKGKEV 278
           +L+  + LV G+A+ G F  A  ++ +M+              V+   G +    +G+EV
Sbjct: 159 NLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREV 218

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H +++R G    + V N L+ MY KCG +  +R +F  M  +D +SWN MISG  +NG  
Sbjct: 219 HVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMG 278

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
            E +  F AMR   +     +L S +S+C  LG   LG+ IH   +  G   D+SV N+L
Sbjct: 279 HEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSL 338

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
             +Y  AG      K+F  M   D VSW ++I  + +   L  +A+  Y  M +    P+
Sbjct: 339 TQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGY-EYNFLPEKAIDTYRMMDQDSVKPD 397

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
            +T   +L+A ++      G ++H   IK  + +   + N L++ Y KC  +D    IF 
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH 457

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWF-MMQRGQRLDHFTFATVLSACASVATL 577
            +  R++ +SW S+I+G   N    +A  L++F  M+   + +  T    L+ACA +  L
Sbjct: 458 NIP-RKNVISWTSIIAGLRLNNRCFEA--LIFFRQMKMTLQPNAITLTAALAACARIGAL 514

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
             G E+HA  +R  +  D  + +AL+DMY +CGR++ A   F+    ++V SWN +++GY
Sbjct: 515 MCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQK-KDVSSWNILLTGY 573

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
           +  G G   + LF +M      PD +TF+ +L  C  + +V +G  +F  M + YG+ P 
Sbjct: 574 SERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEE-YGVTPN 632

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
           L+ ++C+VDLLGRAGEL +  +FI KMP+TP+  +W  +L A CR +    +LG  +A  
Sbjct: 633 LKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA-CRIH-HNIDLGELSAQR 690

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           +FE++  +   Y+LL N+YA  GKW +VAK R+ MKE  +  +AGCSWV +K  VH F++
Sbjct: 691 IFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLS 750

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL 877
            D+ HP+   I   L    +KM + G    ++ +  D    S++++   HSE+ A+AF L
Sbjct: 751 DDKYHPQTKEINTVLDGFYEKMSEVGLTTSSESSSMDETEISRDEIFCGHSERKAIAFGL 810

Query: 878 TRN-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
             +   +PI + KNL +C  CH   KFISK V REI +RDS  FHHF DG+CSCGD
Sbjct: 811 INSVPGMPIWVTKNLNMCESCHDTVKFISKTVRREISVRDSEHFHHFKDGECSCGD 866



 Score =  202 bits (515), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 213/400 (53%), Gaps = 12/400 (3%)

Query: 263 VSMNGLMEGRR---KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
           V++  L E +R   +G +V+   + S     V +GN  + M+ + G + D+  VF  M  
Sbjct: 98  VALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFLAMFVRFGNLVDAWYVFGKMSE 157

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRR----DGLMSSNFSLISTLSSCASLGWIML 375
           ++  SWN ++ G  + G ++EAI   C   R     G+    ++    L +C  +  +  
Sbjct: 158 RNLFSWNVLVGGYAKQGYFDEAI---CLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G+++H   ++ G + D+ V NAL+++Y   G +     +F  MP  D +SWN++I  + +
Sbjct: 215 GREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFE 274

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           +  +  E +K +  MR     P+ +T  ++++A       +LG  +HA VI    A + +
Sbjct: 275 N-GMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           + N+L   Y   G   + EK+F+RM + +D VSW +MISGY +N L  KA++    M Q 
Sbjct: 334 VCNSLTQMYLYAGSWREAEKLFSRM-DCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQD 392

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
             + D  T A VLSACA++  L+ G+E+H   ++A L   V++ + L++MYSKC  ID A
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKA 452

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
              F  +P +NV SW S+I+G   +    +AL  F QMK+
Sbjct: 453 LDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKM 492



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 156/635 (24%), Positives = 289/635 (45%), Gaps = 66/635 (10%)

Query: 58  VSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
           + G    G   EA K+   M      ++     +++R C+       + G +V+ + L S
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCE--WKRAHEEGSKVYSVALSS 123

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
             +    + N  +AM+       D A  +F ++  R+L SWN ++  Y+++G       L
Sbjct: 124 MNSLSVELGNAFLAMFVRFGNLVD-AWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICL 182

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS 235
           + RM   G    +KP+ YTF  ++        +  G    +++   V + G   D+ V +
Sbjct: 183 YHRMLWVG---GVKPDVYTFPCVLRTCGGIPDLARG----REVHVHVVRYGYELDIDVVN 235

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG------------------------ 271
           AL++ + + G+   AR +F++M +++++S N ++ G                        
Sbjct: 236 ALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDP 295

Query: 272 -----------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                            RR G+++H Y+I +G    ++V N L  MY   G+  ++  +F
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLF 355

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             M  KD VSW TMISG + N   E+AI  +  M +D +     ++ + LS+CA+LG + 
Sbjct: 356 SRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLD 415

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
            G ++H   +K  L S V V+N L+++Y+    + + L +F  +P  + +SW S+I    
Sbjct: 416 TGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLR 475

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANET 494
            +     EA+ ++  M+     PN +T    LAA +       G ++HA V++  V  + 
Sbjct: 476 LNNRCF-EALIFFRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDD 533

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
            + NALL  Y +CG M+     F   S+++D  SWN +++GY         + L   M++
Sbjct: 534 FLPNALLDMYVRCGRMNIAWNQFN--SQKKDVSSWNILLTGYSERGQGSVVVELFDRMVK 591

Query: 555 RGQRLDHFTFATVLSACASVATLERGM----EVHACGVRACLEFDVVIGSALVDMYSKCG 610
              R D  TF ++L  C     + +G+    ++   GV   L+      + +VD+  + G
Sbjct: 592 ARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKH----YACVVDLLGRAG 647

Query: 611 RIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGD 644
            +  A +F   MPV  +   W ++++    H + D
Sbjct: 648 ELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNID 682



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 155/565 (27%), Positives = 261/565 (46%), Gaps = 55/565 (9%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           V L N  + ++VR G+L  A  +F +M +RN  SW  +V GY  +G  +EA  ++  M+ 
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLW 188

Query: 80  AGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
            G +  + Y    VLR C   G      G +VH  V++     D  V N LI MY  C +
Sbjct: 189 VGGVKPDVYTFPCVLRTCG--GIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGD 246

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
               AR +F+ +  RD+ISWN++IS Y + G      KLF  M+      S+ P+  T  
Sbjct: 247 -VKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMR----GLSVDPDLMTLT 301

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           S+I+A    +L    L + I A V   G   D+ V ++L   +   G++  A K+F +M 
Sbjct: 302 SVISAC--ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMD 359

Query: 259 QKNVVSMNGLMEGRR-----------------------------------------KGKE 277
            K++VS   ++ G                                            G E
Sbjct: 360 CKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE 419

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +H   I++ L   V V N L+NMY+KC  ID +  +F  +  K+ +SW ++I+GL  N  
Sbjct: 420 LHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNR 479

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
             EA++ F  M+   L  +  +L + L++CA +G +M G++IH   L+ G+  D  + NA
Sbjct: 480 CFEALIFFRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA 538

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           LL +Y   G ++     F    + D  SWN ++  +++     S  V+ +  M +A   P
Sbjct: 539 LLDMYVRCGRMNIAWNQFN-SQKKDVSSWNILLTGYSE-RGQGSVVVELFDRMVKARVRP 596

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           + +TFI++L       M + G    +++ +Y V         ++   G+ GE+ +  K  
Sbjct: 597 DEITFISLLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQEAHKFI 656

Query: 518 ARMSERRDEVSWNSMISG-YIHNEL 541
            +M    D   W ++++   IH+ +
Sbjct: 657 QKMPVTPDPAVWGALLNACRIHHNI 681



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 196/425 (46%), Gaps = 18/425 (4%)

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-- 386
           + GL  NG  EEA+    +M+   +       ++ +  C    W    ++ H EG K+  
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCE---W----KRAHEEGSKVYS 118

Query: 387 -GLDS----DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             L S     V + NA L+++   G L     VF  M E +  SWN ++G +A       
Sbjct: 119 VALSSMNSLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDE 178

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
               Y+  +   G  P+  TF  +L           G +VH  V++Y    +  + NAL+
Sbjct: 179 AICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALI 238

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
           + Y KCG++     +F RM  RRD +SWN+MISGY  N +  + + L + M       D 
Sbjct: 239 TMYVKCGDVKSARLLFDRMP-RRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDL 297

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
            T  +V+SAC  +     G ++HA  +      D+ + ++L  MY   G    A + F  
Sbjct: 298 MTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSR 357

Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           M  +++ SW +MISGY  +   +KA+  +  M  D   PD +T   VLSAC+  G +D G
Sbjct: 358 MDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417

Query: 682 FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACC 741
            +  K ++    LI  +   + ++++  +   +DK  +  + +P   N + W +++ A  
Sbjct: 418 VELHK-LAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSII-AGL 474

Query: 742 RANCR 746
           R N R
Sbjct: 475 RLNNR 479



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 116/469 (24%), Positives = 208/469 (44%), Gaps = 57/469 (12%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H+ ++++G+  D+ + N LI +YV+ GD+ SA  LFD MP R+ +SW  ++SGY   GM 
Sbjct: 219 HVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMG 278

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           +E  K+F  M       +   L SV+ AC+  G    + G  +H  V+ +    D  V N
Sbjct: 279 HEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDR--RLGRDIHAYVITTGFAVDISVCN 336

Query: 128 VLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
            L  MY   GS  E    A ++F  ++ +D++SW ++IS Y            +  M ++
Sbjct: 337 SLTQMYLYAGSWRE----AEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQD 392

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
               S+KP+E T  ++++A   + L       ++  +  KA L+S + V + L++ +++ 
Sbjct: 393 ----SVKPDEITVAAVLSAC--ATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKC 446

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------ 274
                A  IF  + +KNV+S   ++ G R                               
Sbjct: 447 KCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMTLQPNAITLTAALA 506

Query: 275 ----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                     GKE+H +++R+G+     + N L++MY +CG ++ + + F     KD  S
Sbjct: 507 ACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQ-KKDVSS 565

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           WN +++G  + G     +  F  M +  +     + IS L  C     +  G     +  
Sbjct: 566 WNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKME 625

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           + G+  ++     ++ L   AG L    K    MP   D   W +++ A
Sbjct: 626 EYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA 674


>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 226/595 (37%), Positives = 342/595 (57%), Gaps = 45/595 (7%)

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           ++H + +K G D    +SN LL +Y   G + + L++F  MP  D VSW S++ A   ++
Sbjct: 24  ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAH--NK 81

Query: 438 ALVSEAVKYYLD--MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           AL+       L+      G  P+   F  I+ A SS    +LG QVHA+ +     ++  
Sbjct: 82  ALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEV 141

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV------ 549
           ++++L+  Y KCG+ DD   +F  +   ++ VSW SMISGY  +    +AM+L       
Sbjct: 142 VKSSLIDMYTKCGQPDDARAVFDSIL-FKNSVSWTSMISGYARSGRKCEAMDLFLQAPVR 200

Query: 550 ----WF-----MMQRGQRL-----------------DHFTFATVLSACASVATLERGMEV 583
               W      ++Q G  +                 D    ++V+  CA++A LE G ++
Sbjct: 201 NLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQI 260

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           H   +    E  + I +ALVDMY+KC  I  A   F  MP ++V SW S+I G A+HG  
Sbjct: 261 HGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKA 320

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC 703
           ++ALTL+ +M L    P+ VTFVG+L ACSHAGLV  G + F+SM+  Y + P L+ ++C
Sbjct: 321 EEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTC 380

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP 763
           ++DLL R+G LD+ E  ++K+P  P+   W ++L AC R N    E+G + A+ + +++P
Sbjct: 381 LLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHN--NLEMGVRIADRVLDLKP 438

Query: 764 QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE-SH 822
           ++   Y+LL+N+YA    W  V+K RK M   EV+KE G S +       VF AG+   H
Sbjct: 439 EDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDH 498

Query: 823 PEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK 882
           P K+ I   LK+L+ +MR  GYVP T F L+D+E + KE  + +HSE++AVA+ L +   
Sbjct: 499 PMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLK--A 556

Query: 883 LP---IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +P   IRI+KNLR+CGDCH+  KFIS IV REI++RD+ R+HHF +GKCSC D+W
Sbjct: 557 VPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 203/437 (46%), Gaps = 41/437 (9%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR 168
           ++H  ++K+      L+SN L+ +YG C      A ++F+E+  RD +SW SI++ +++ 
Sbjct: 24  ELHSQIIKAGFDKSSLLSNTLLDVYGKC-GLIPQALQLFDEMPNRDHVSWASILTAHNKA 82

Query: 169 GDTISVFKLFSRM-QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
                   + + M   +G    L+P+ + F  ++ A   S L    L +Q+ A    +  
Sbjct: 83  LIPRRTLSMLNTMFTHDG----LQPDHFVFACIVRAC--SSLGYLRLGKQVHARFMLSFF 136

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGL 287
             D  V S+L+  + + G    AR +F+ ++ KN VS   ++ G                
Sbjct: 137 CDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISG---------------- 180

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
                        YA+ G   ++  +F     ++  SW  +ISGL Q+G    +   F  
Sbjct: 181 -------------YARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNE 227

Query: 348 MRRDGL-MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
           MRR+G+ +     L S +  CA+L  + LG+QIHG  + LG +S + +SNAL+ +YA   
Sbjct: 228 MRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCS 287

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
            +     +F+ MP  D +SW S+I   A       EA+  Y +M  +   PN VTF+ +L
Sbjct: 288 DILAAKDIFYRMPRKDVISWTSIIVGTA-QHGKAEEALTLYDEMVLSRIKPNEVTFVGLL 346

Query: 467 AAASSFSMGKLGHQV-HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
            A S   +   G ++  +    Y++         LL    + G +D+ E +  ++  + D
Sbjct: 347 YACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPD 406

Query: 526 EVSWNSMISGYI-HNEL 541
           E +W S++S  + HN L
Sbjct: 407 EPTWASLLSACMRHNNL 423



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 210/457 (45%), Gaps = 43/457 (9%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           E+H  +I++G      + N L+++Y KCG I  +  +F  M  +D VSW ++++  ++  
Sbjct: 24  ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83

Query: 337 CYEEAIMNFCAM-RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
                +     M   DGL   +F     + +C+SLG++ LG+Q+H   +      D  V 
Sbjct: 84  IPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVK 143

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS------------------- 436
           ++L+ +Y   G       VF  +   + VSW S+I  +A S                   
Sbjct: 144 SSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLF 203

Query: 437 --EALVSEAVK---------YYLDMRRAGWS-PNGVTFINILAAASSFSMGKLGHQVHAQ 484
              AL+S  ++          + +MRR G    + +   +++   ++ ++ +LG Q+H  
Sbjct: 204 SWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGL 263

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
           VI     +   I NAL+  Y KC ++   + IF RM  R+D +SW S+I G   +    +
Sbjct: 264 VIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMP-RKDVISWTSIIVGTAQHGKAEE 322

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV-HACGVRACLEFDVVIGSALV 603
           A+ L   M+    + +  TF  +L AC+    + RG E+  +      +   +   + L+
Sbjct: 323 ALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLL 382

Query: 604 DMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           D+ S+ G +D A    D +P + +  +W S++S   RH + +  + +  ++ LD    D 
Sbjct: 383 DLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRV-LDLKPEDP 441

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
            T++ +LS       V  G + + S+S+V  L+  +E
Sbjct: 442 STYI-LLSN------VYAGAEMWGSVSKVRKLMSSME 471



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 208/474 (43%), Gaps = 68/474 (14%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H QI+K GF     L NTL++VY + G +  A +LFDEMP+R+ VSWA I++ +    +
Sbjct: 25  LHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALI 84

Query: 67  SNEACKMFKEM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
                 M   M    G   + +    ++RAC   G    + G QVH   + S    D +V
Sbjct: 85  PRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLG--YLRLGKQVHARFMLSFFCDDEVV 142

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS------------------- 166
            + LI MY  C +  D AR +F+ I  ++ +SW S+IS Y+                   
Sbjct: 143 KSSLIDMYTKCGQPDD-ARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRN 201

Query: 167 ------------QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL 214
                       Q G  I  F LF+ M+REG       +     S++    +  L+   L
Sbjct: 202 LFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIV---DPLVLSSVVGGCAN--LALLEL 256

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK 274
            +QI  +V   G  S L++ +ALV  +A+  +   A+ IF +M +K+V+S   ++ G  +
Sbjct: 257 GKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQ 316

Query: 275 GKEVHGYLIRSGLFDMVAVGN---------GLVNMYAKCGTIDDSRSVFRFMIGKDSVS- 324
             +    L    L+D + +           GL+   +  G +   R +FR M    S++ 
Sbjct: 317 HGKAEEALT---LYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINP 373

Query: 325 ----WNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
               +  ++  L ++G  +EA  +++    + D       +  S LS+C     + +G +
Sbjct: 374 SLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPD-----EPTWASLLSACMRHNNLEMGVR 428

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADA---GYLSRCLKVFFLMPEHDQVSWNSV 429
           I    L L  + D S    L ++YA A   G +S+  K+   M    +  ++S+
Sbjct: 429 IADRVLDLKPE-DPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSI 481



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 39/231 (16%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H + +   F  D  + ++LI++Y + G    A  +FD +  +NSVSW  ++SGY   
Sbjct: 125 KQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARS 184

Query: 65  GMSNEAC-------------------------------KMFKEMVRAGF-LLNRYALGSV 92
           G   EA                                 +F EM R G  +++   L SV
Sbjct: 185 GRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSV 244

Query: 93  LRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIET 152
           +  C     +  + G Q+H LV+         +SN L+ MY  C +    A+ IF  +  
Sbjct: 245 VGGCANL--ALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDIL-AAKDIFYRMPR 301

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           +D+ISW SII   +Q G       L+  M        +KPNE TF  L+ A
Sbjct: 302 KDVISWTSIIVGTAQHGKAEEALTLYDEMVLS----RIKPNEVTFVGLLYA 348



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 52/259 (20%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  ++  GF   +F+ N L+++Y +  D+ +A  +F  MP ++ +SW  I+ G    
Sbjct: 258 KQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQH 317

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G + EA  ++ EMV +    N      +L AC   G            LV +  + F  +
Sbjct: 318 GKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAG------------LVSRGRELFRSM 365

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
            ++  I                        L  +  ++ + S+ G       L  ++   
Sbjct: 366 TTDYSI---------------------NPSLQHYTCLLDLLSRSGHLDEAENLLDKI--- 401

Query: 185 GFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAG----LLSDLYVGSALV 238
                 KP+E T+ SL++A   ++++  G  +  ++L +  +      LLS++Y G+ + 
Sbjct: 402 ----PFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEM- 456

Query: 239 SGFARLGNFYYARKIFEQM 257
                 G+    RK+   M
Sbjct: 457 -----WGSVSKVRKLMSSM 470


>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Glycine max]
          Length = 638

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/625 (36%), Positives = 343/625 (54%), Gaps = 56/625 (8%)

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY--LSRCLKVFFLM 418
           +  + +C S+  +   +Q+H   +K G   D +++  +L L A + +  +   L VF  +
Sbjct: 19  VPQIKACKSMREL---KQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQL 75

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDM-RRAGWSPNGVTFINILAAASSFSMGKL 477
           PE +  +WN+VI A A+++    +A+  +  M   A   PN  TF ++L A +  +    
Sbjct: 76  PERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAE 135

Query: 478 GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE--------------- 522
           G QVH  ++K+ + ++  +   LL  Y  CG M+D   +F R  E               
Sbjct: 136 GKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGR 195

Query: 523 -------------------------------RRDEVSWNSMISGYIHNELLPKAMNLVWF 551
                                          +R  VSWN MISGY  N    +A+ +   
Sbjct: 196 EFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHR 255

Query: 552 MMQRGQRL-DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCG 610
           MMQ G  L +  T  +VL A + +  LE G  VH    +  +  D V+GSALVDMY+KCG
Sbjct: 256 MMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCG 315

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
            I+ A + F+ +P  NV +WN++I G A HG  +      S+M+  G  P  VT++ +LS
Sbjct: 316 SIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILS 375

Query: 671 ACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNS 730
           ACSHAGLVDEG   F  M    GL P++E + CMVDLLGRAG L++ EE I  MP+ P+ 
Sbjct: 376 ACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDD 435

Query: 731 LIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARK 790
           +IW+ +LGA      +  ++G +AA +L +M P ++  YV L+NMYAS G W+ VA  R 
Sbjct: 436 VIWKALLGAS--KMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRL 493

Query: 791 AMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKF 850
            MK+ +++K+ GCSW+ +   +H F+  D+SH     I+  L+E++ K+   G++P T  
Sbjct: 494 MMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKLSLEGHMPDTTQ 553

Query: 851 ALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVG 909
            L  ++ + KE ++ YHSEKIAVAF +++   K P+ I+KNLR+C DCHS+ K ISK+  
Sbjct: 554 VLLKMDEKHKESVLHYHSEKIAVAFGLISTPPKTPLCIVKNLRICEDCHSSMKLISKMYE 613

Query: 910 REIVLRDSNRFHHFNDGKCSCGDYW 934
           R+IV+RD  RFHHF  G CSC DYW
Sbjct: 614 RKIVIRDRKRFHHFEHGSCSCMDYW 638



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 231/451 (51%), Gaps = 25/451 (5%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSC-LESTDCARRIFEEIETRDLISWNSIISVYSQ 167
           QVH  ++K+ QT D  ++  ++ +  +        A  +F+++  R+  +WN++I   ++
Sbjct: 33  QVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWNTVIRALAE 92

Query: 168 RGDT-ISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
             D  +    +F +M  E    +++PN++TF S++ A   +V++     +Q+  ++ K G
Sbjct: 93  TQDRHLDALLVFCQMLSEA---TVEPNQFTFPSVLKAC--AVMARLAEGKQVHGLLLKFG 147

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSG 286
           L+ D +V + L+  +   G+   A  +F + ++  V  +  L+   R G+E +       
Sbjct: 148 LVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVE-GVDDVRNLVRDER-GREFN------- 198

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
               V + N +V+ YA+ G +  +R +F  M  +  VSWN MISG  QNG Y+EAI  F 
Sbjct: 199 ----VVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFH 254

Query: 347 AMRRDG-LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
            M + G ++ +  +L+S L + + LG + LG+ +H    K  +  D  + +AL+ +YA  
Sbjct: 255 RMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKC 314

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
           G + + ++VF  +P+++ ++WN+VIG  A      ++   Y   M + G SP+ VT+I I
Sbjct: 315 GSIEKAIQVFERLPQNNVITWNAVIGGLA-MHGKANDIFNYLSRMEKCGISPSDVTYIAI 373

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSER 523
           L+A S   +   G      ++  +V  +  IE+   ++   G+ G +++ E++   M  +
Sbjct: 374 LSACSHAGLVDEGRSFFNDMVN-SVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMK 432

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
            D+V W +++     ++ +   M     +MQ
Sbjct: 433 PDDVIWKALLGASKMHKNIKIGMRAAEVLMQ 463



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 157/337 (46%), Gaps = 20/337 (5%)

Query: 13  KHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACK 72
           + G  ++V LCN +++ Y RVG+L +A +LFD M  R+ VSW  ++SGY   G   EA +
Sbjct: 192 ERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIE 251

Query: 73  MFKEMVRAGFLL-NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
           +F  M++ G +L NR  L SVL A    G    + G  VH    K+    D ++ + L+ 
Sbjct: 252 IFHRMMQMGDVLPNRVTLVSVLPAISRLGV--LELGKWVHLYAEKNKIRIDDVLGSALVD 309

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY  C  S + A ++FE +   ++I+WN++I   +  G    +F   SRM++ G    + 
Sbjct: 310 MYAKC-GSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCG----IS 364

Query: 192 PNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
           P++ T+ ++++A   + L   G         MV   GL   +     +V    R G    
Sbjct: 365 PSDVTYIAILSACSHAGLVDEGRSFFND---MVNSVGLKPKIEHYGCMVDLLGRAGYLEE 421

Query: 250 ARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAK 303
           A ++   M ++ + V    L+   +  K +  G      L  M    +G    L NMYA 
Sbjct: 422 AEELILNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYAS 481

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
            G  D   +V R M+    +  +   S ++ +G   E
Sbjct: 482 SGNWDGVAAV-RLMMKDMDIRKDPGCSWIEIDGVIHE 517



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 168/401 (41%), Gaps = 68/401 (16%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVG--DLASASKLFDEMPDRNSVSWACIVS 59
           ++ K  H  ++K G  +D  +   ++ +       D+  A  +FD++P+RN  +W  ++ 
Sbjct: 29  RELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWNTVIR 88

Query: 60  GYTHKGMSN-EACKMFKEMV-RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
                   + +A  +F +M+  A    N++   SVL+AC     +    G QVH L+LK 
Sbjct: 89  ALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVM--ARLAEGKQVHGLLLKF 146

Query: 118 NQTFDGLVSNVLIAMYGSC-------------LESTD----------------------- 141
               D  V   L+ MY  C             +E  D                       
Sbjct: 147 GLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNVMV 206

Query: 142 ----------CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
                      AR +F+ +  R ++SWN +IS Y+Q G      ++F RM + G    + 
Sbjct: 207 DGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMG---DVL 263

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
           PN  T  S++ A   S L    L + +    +K  +  D  +GSALV  +A+ G+   A 
Sbjct: 264 PNRVTLVSVLPAI--SRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAI 321

Query: 252 KIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIR---SGLFDMVAVGNGLVNMYAKCG 305
           ++FE++ Q NV++ N ++ G     K  ++  YL R    G+         +++  +  G
Sbjct: 322 QVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAG 381

Query: 306 TIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEA 341
            +D+ RS F  M+    +      +  M+  L + G  EEA
Sbjct: 382 LVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEA 422


>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 221/611 (36%), Positives = 350/611 (57%), Gaps = 49/611 (8%)

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG-------YLSRCLKVF 415
           +L +C+ L  + +   IH   ++  +  DV  ++ L++   D         Y SR   +F
Sbjct: 23  SLETCSDLTHLKI---IHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASR---IF 76

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
             +   +   +N++I   + S+    +A  +Y+  +R G  P+ +TF  ++ + +     
Sbjct: 77  SQIQNPNLFIFNAMIRGHSGSKN-PDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCI 135

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYG------------------------------ 505
            +G Q H  +IK+    +  ++N+L+  Y                               
Sbjct: 136 SMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGF 195

Query: 506 -KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            KCG+++   K+F +M E+ + V+W++MISGY  N    KA+ L   +  +G R +    
Sbjct: 196 NKCGDVESARKLFDQMPEK-NLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVM 254

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
            +V+S+CA +  LE G   H   V+  +  ++++G+ALVDMY++CG ID A   F+ +P 
Sbjct: 255 VSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPE 314

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           R+  SW ++I+G A HG+ +++L  F+ M   G  P  +TF  VLSACSH GLV+ GF+ 
Sbjct: 315 RDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQI 374

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           F+SM + + + P+LE + CMVDLLGRAG+L++ E F+ KMP+ PN+ +W  +LGA CR +
Sbjct: 375 FESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGA-CRIH 433

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
            +  E+G +   +L ++ PQ++  YVLL+N+YA+  +WE V + R+ MK   +KK  G S
Sbjct: 434 -KNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHS 492

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLV 864
            + +   VH F  GD SHPE D I    +E+  ++R AGY   T  ALFD++ E KE  +
Sbjct: 493 LIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKESAL 552

Query: 865 SYHSEKIAVAFVLTRN-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
             HSEK+A+AF + R+ +  PIRI+KNLRVC DCH+A K ISK+ GRE+++RD NRFHHF
Sbjct: 553 HRHSEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHF 612

Query: 924 NDGKCSCGDYW 934
             G CSC DYW
Sbjct: 613 RQGLCSCMDYW 623



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 214/432 (49%), Gaps = 48/432 (11%)

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLEST------DCARRIFEEIETRDLISWNSIIS 163
           +H  +++++   D   ++ LIA    C++ +      D A RIF +I+  +L  +N++I 
Sbjct: 36  IHAYMIRTHIICDVFAASRLIAF---CVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIR 92

Query: 164 VYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVK 223
            +S   +    F  + + QR+G    L P+  TF  L+ +   + L    +  Q    + 
Sbjct: 93  GHSGSKNPDQAFHFYVQSQRQG----LLPDNLTFPFLVKSC--TKLHCISMGSQAHGHII 146

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLI 283
           K G   D+YV ++LV  +A  G+   A  IF++M   +VVS   ++ G            
Sbjct: 147 KHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRG------------ 194

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
                            + KCG ++ +R +F  M  K+ V+W+TMISG  QN  +++A+ 
Sbjct: 195 -----------------FNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVE 237

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            F  ++  G+ ++   ++S +SSCA LG + LG++ H   +K G+  ++ +  AL+ +YA
Sbjct: 238 LFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYA 297

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
             G + + + VF  +PE D +SW ++I   A        ++KY+  M  AG +P  +TF 
Sbjct: 298 RCGSIDKAVWVFEDLPERDTLSWTALIAGLA-MHGYSERSLKYFATMVEAGLTPRDITFT 356

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMS 521
            +L+A S   + + G Q+  + +K +   E  +E+   ++   G+ G++++ E+   +M 
Sbjct: 357 AVLSACSHGGLVERGFQIF-ESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMP 415

Query: 522 ERRDEVSWNSMI 533
            + +   W +++
Sbjct: 416 VKPNAPVWGALL 427



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 119/492 (24%), Positives = 211/492 (42%), Gaps = 57/492 (11%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGL----VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
           K +H Y+IR+ +   V   + L    V+  +    ID +  +F  +   +   +N MI G
Sbjct: 34  KIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRG 93

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
              +   ++A   +   +R GL+  N +    + SC  L  I +G Q HG  +K G + D
Sbjct: 94  HSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKD 153

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF---ADSEA---------- 438
           V V N+L+ +YA  G       +F  M   D VSW S+I  F    D E+          
Sbjct: 154 VYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPE 213

Query: 439 --LVS---------------EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
             LV+               +AV+ +  ++  G   N    ++++++ +     +LG + 
Sbjct: 214 KNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERA 273

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H  V+K  +     +  AL+  Y +CG +D    +F  + E RD +SW ++I+G   +  
Sbjct: 274 HDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPE-RDTLSWTALIAGLAMHGY 332

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC-LEFDVVIGS 600
             +++     M++ G      TF  VLSAC+    +ERG ++     R   +E  +    
Sbjct: 333 SERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYG 392

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGH---GDKALTLFSQMKLD 656
            +VD+  + G+++ A RF   MPV+ N   W +++     H +   G++   +  Q+   
Sbjct: 393 CMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQL--- 449

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRA----- 711
             LP H  +  +LS         E     + M +  GL  +      +++L GR      
Sbjct: 450 --LPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGL--KKPPGHSLIELDGRVHKFTI 505

Query: 712 -----GELDKIE 718
                 E+DKIE
Sbjct: 506 GDSSHPEMDKIE 517



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 38/227 (16%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYV-------------------------------RVGDL 36
           H  I+KHGF  DV++ N+L+++Y                                + GD+
Sbjct: 142 HGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDV 201

Query: 37  ASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRAC 96
            SA KLFD+MP++N V+W+ ++SGY      ++A ++FK +   G   N   + SV+ +C
Sbjct: 202 ESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSC 261

Query: 97  QECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLI 156
              G    + G + H  V+K+  T + ++   L+ MY  C  S D A  +FE++  RD +
Sbjct: 262 AHLG--ALELGERAHDYVVKNGMTLNLILGTALVDMYARC-GSIDKAVWVFEDLPERDTL 318

Query: 157 SWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           SW ++I+  +  G +    K F+ M   G    L P + TF ++++A
Sbjct: 319 SWTALIAGLAMHGYSERSLKYFATMVEAG----LTPRDITFTAVLSA 361



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 110/516 (21%), Positives = 202/516 (39%), Gaps = 80/516 (15%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLAS----ASKLFDEMPDRNSVSWACIVSG 60
           K+ H  +++     DVF  + LI   V      S    AS++F ++ + N   +  ++ G
Sbjct: 34  KIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRG 93

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           ++     ++A   + +  R G L +      ++++C +        G Q H  ++K    
Sbjct: 94  HSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKL--HCISMGSQAHGHIIKHGFE 151

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D  V N L+ MY +    T+ A  IF+ +   D++SW S+I  +++ GD  S  KLF +
Sbjct: 152 KDVYVQNSLVHMYAT-FGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQ 210

Query: 181 MQREGF---------------------------RYSLKPNEYTFGSLITAAYSSVLSGSY 213
           M  +                                ++ NE    S+I++   + L    
Sbjct: 211 MPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSC--AHLGALE 268

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR 273
           L ++    V K G+  +L +G+ALV  +AR G+   A  +FE + +++ +S   L+    
Sbjct: 269 LGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALI---- 324

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
            G  +HGY  RS  +    V  GL                         +++  ++S   
Sbjct: 325 AGLAMHGYSERSLKYFATMVEAGLT---------------------PRDITFTAVLSACS 363

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFS----LISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
             G  E     F +M+RD  +         ++  L     L      ++     LK+ + 
Sbjct: 364 HGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKL------EEAERFVLKMPVK 417

Query: 390 SDVSVSNALLS---LYADAGYLSRCLKVFF-LMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            +  V  ALL    ++ +A    R  K+   L+P+H   S   V+ +   + A   E V 
Sbjct: 418 PNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQH---SGYYVLLSNIYANAKEWEKVT 474

Query: 446 YYLDMRRAGW--SPNGVTFINILAAASSFSMGKLGH 479
               M +A     P G + I +      F++G   H
Sbjct: 475 EMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSH 510


>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Vitis vinifera]
          Length = 868

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 273/856 (31%), Positives = 442/856 (51%), Gaps = 92/856 (10%)

Query: 68  NEACKMFKEMVR--AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
           +EA  +F E VR   G+  N   L ++L++C     S  +FG  +H   LK        +
Sbjct: 19  DEALSLFLERVRCSVGYKPNGQILAALLKSC--VAISAIRFGSVLHGYALKLGHVSCQSL 76

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS-VYSQRGDTISVFKLFSRMQRE 184
              L+ +Y     + D   ++F E++ RD + WN ++S +   +     V +LF  M   
Sbjct: 77  CKGLLNLYAKS-GALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMV 135

Query: 185 GFRYSLKPNEYTFGSLIT-----------AAYSSVLSG---SYLL--QQILAMVKKAGLL 228
                 KPN  T   ++            + +S V+     S+ L    +++M  K GL+
Sbjct: 136 N---EAKPNSVTIAIVLPVCARLREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLV 192

Query: 229 -SDLYVG------------SALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLME- 270
            SD Y              +A+++GF+       A K+F  M    IQ N  ++  ++  
Sbjct: 193 CSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPV 252

Query: 271 --------GRRKGKEVHGYLIRS-GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                   G R GKEVH +++R   L + V+V N L++ Y + G ++ +  +FR M  +D
Sbjct: 253 CASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRD 312

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCA-MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
            VSWN +I+G   NG + +A+  F   +  + +   + +L+S L +CA +  + + + IH
Sbjct: 313 LVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIH 372

Query: 381 GEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           G  ++  GL  D SV NALLS YA   Y    L+ F ++   D +SWN+++ AF +S   
Sbjct: 373 GYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTES-GC 431

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE---TTI 496
            +  V     M R G  P+ +T + I+   ++ S  K   + H+  I++ +       T+
Sbjct: 432 ETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTL 491

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH------------------ 538
            N +L  Y KCG M     IF  +SE+R+ V+ NSMISGY++                  
Sbjct: 492 GNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETD 551

Query: 539 -------------NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
                        N+   +A++L   +  +G + D  T  ++L ACA +A++    + H 
Sbjct: 552 LTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHG 611

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
             +RAC   DV +  A +DMYSKCG +  A + F   P +++  + +M+ G+A HG G++
Sbjct: 612 YVIRACFN-DVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEE 670

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
           AL +FS M   G  PDHV    VL ACSHAGLVDEG+K F S+ +V+G  P +EQ++C+V
Sbjct: 671 ALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVV 730

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN 765
           DLL R G +     F+ +MPI  N+ IW T+LGA CR +  + ELGR  A+ LF++E  N
Sbjct: 731 DLLARGGRIKDAYTFVTRMPIEANANIWGTLLGA-CRTH-HEVELGRVVADHLFKIESDN 788

Query: 766 AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
             NYV+++N+YA+  +W+ V + R+ M+  E+KK AGCSW+ +    +VF+AGD SHP++
Sbjct: 789 IGNYVVMSNLYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGDSSHPQR 848

Query: 826 DLIYEKLKELNQKMRD 841
            +IY  L  L+Q M++
Sbjct: 849 SIIYRTLSTLDQLMKE 864



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 171/723 (23%), Positives = 314/723 (43%), Gaps = 102/723 (14%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           + H   LK G      LC  L+N+Y + G L   +KLF EM  R+ V W  ++SG    G
Sbjct: 60  VLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLA--G 117

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRAC--QECGPSGFKFGMQVHCLVLKSNQTFDG 123
             +   ++ + + RA  ++N     SV  A     C       G  VH  V+KS      
Sbjct: 118 FQSHEAEVMR-LFRAMHMVNEAKPNSVTIAIVLPVCARLREDAGKSVHSYVIKSGLESHT 176

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           L  N LI+MY  C      A   F  IE +D++SWN++I+ +S+   T   FKLF  M  
Sbjct: 177 LAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAM-- 234

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILA--MVKKAGLLSDLYVGSALVSGF 241
              +  ++PN  T  S++    S   +  Y   + +   ++++  L+ D+ V ++L+S +
Sbjct: 235 --LKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFY 292

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------------------------- 272
            R+G    A  +F  M  +++VS N ++ G                              
Sbjct: 293 LRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTL 352

Query: 273 -------------RKGKEVHGYLIR-SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                        +  K +HGY+IR  GL +  +VGN L++ YAKC     +   F  + 
Sbjct: 353 VSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMIS 412

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            KD +SWN ++    ++GC    +     M R+G+   + ++++ +   A++  +   ++
Sbjct: 413 RKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKE 472

Query: 379 IHGEGLKLGL---DSDVSVSNALLSLYADAGYLSRCLK---------------------- 413
            H   ++ GL   D+  ++ N +L  YA  G +   +                       
Sbjct: 473 THSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYV 532

Query: 414 ----------VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
                     +F  M E D  +WN ++  +A+++    +A+  + +++  G  P+ VT +
Sbjct: 533 NSSSHDDAYAIFNTMSETDLTTWNLMVRVYAEND-FPDQALSLFHELQGQGMKPDIVTIM 591

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           +IL A +  +   +  Q H  VI+    N+  +  A +  Y KCG +    K+F   S +
Sbjct: 592 SILPACAHMASVHMLRQCHGYVIR-ACFNDVRLNGAFIDMYSKCGSVFGAYKLFLS-SPQ 649

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
           +D V + +M+ G+  + +  +A+ +  +M++ G + DH     VL AC+    ++ G ++
Sbjct: 650 KDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKI 709

Query: 584 -----HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGY 637
                   G +  +E      + +VD+ ++ GRI  A  F   MP+  N   W +++   
Sbjct: 710 FNSIEKVHGFQPTME----QYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLGAC 765

Query: 638 ARH 640
             H
Sbjct: 766 RTH 768



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 131/307 (42%), Gaps = 19/307 (6%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +V  CN++I+ YV       A  +F+ M + +  +W  +V  Y      ++A  +F E+ 
Sbjct: 520 NVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQ 579

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             G   +   + S+L AC     +      Q H  V+++    D  ++   I MY  C  
Sbjct: 580 GQGMKPDIVTIMSILPACAHM--ASVHMLRQCHGYVIRACFN-DVRLNGAFIDMYSKC-G 635

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
           S   A ++F     +DL+ + +++  ++  G      ++FS M   G    +KP+     
Sbjct: 636 SVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELG----VKPDHVIIT 691

Query: 199 SLITA-AYSSVLSGSYLLQQILAMVKKA-GLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           +++ A +++ ++   +   +I   ++K  G    +   + +V   AR G    A     +
Sbjct: 692 AVLFACSHAGLVDEGW---KIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTR 748

Query: 257 M-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVA--VGNGLV--NMYAKCGTIDDS 310
           M I+ N      L+   R   EV  G ++   LF + +  +GN +V  N+YA     D  
Sbjct: 749 MPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARWDGV 808

Query: 311 RSVFRFM 317
             + R M
Sbjct: 809 MEIRRLM 815


>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 596

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 226/575 (39%), Positives = 334/575 (58%), Gaps = 22/575 (3%)

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALL---------SLYADAGYLSRCLKVFF-LMPEHD 422
           +   +QIH   L+    + V +S+ LL         SL A    L   + V   L+P+ D
Sbjct: 31  VAAAKQIHARALR---AAGVPLSHPLLAKHLLFHLASLRAGPPPLLYAVTVLSCLLPDPD 87

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
             S N+V+   A S       +   L  RR    P+  T+  +L A +     + G  +H
Sbjct: 88  PFSLNTVLRIAASS---AHPRIALALHRRRLA-PPDTHTYPPLLQACTRLLALREGESLH 143

Query: 483 AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE-RRDEVSWNSMISGYIHNEL 541
           A+  K  +     ++N+L+  YG CG  +   ++F  +    R+ VSWNS+++G+  N  
Sbjct: 144 AEAAKNGLVALVFVKNSLVHHYGACGLFESAHRVFDEIPVLERNLVSWNSVMNGFAANGR 203

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             + + +    ++     D FT  +VL+ACA +  L  G  VH    +  L  +  +G+A
Sbjct: 204 PNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGALTLGRRVHVFASKVGLVGNSHVGNA 263

Query: 602 LVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           L+D+Y+KCG ++ A + F+ M V R V SW S+I G A +G G  AL LF  M+ +  +P
Sbjct: 264 LIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFGKDALELFGLMERERLIP 323

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
             +T VGVL ACSH GLVD+GF++F  M   YG+ P +E   CMVDLLGRAG +++   +
Sbjct: 324 TDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLGRAGRVEEAHNY 383

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           I  MP+ PN+++WRT+LGAC  A  +K ELG  A   L E++P ++ +YVLL+N+YA+ G
Sbjct: 384 ITTMPVEPNAVVWRTLLGAC--AMHKKLELGEAAWARLVELDPGHSGDYVLLSNLYAAVG 441

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
           +W D    RK M    V+K  G S V +++ V+ FV GD SHPE D IY+ L E+ +++R
Sbjct: 442 RWADAHVLRKTMATHGVRKNPGHSLVELRNSVYEFVMGDRSHPESDQIYQTLAEIAERLR 501

Query: 841 DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRN-SKLPIRIMKNLRVCGDCHS 899
             GYVP+T   L D+E E KE  ++YHSE++A+AF L ++    PIRI+KNLR+CGDCH 
Sbjct: 502 CQGYVPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGSPIRIVKNLRMCGDCHL 561

Query: 900 AFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             K ISK+  REI++RD +RFHHF  G+CSC DYW
Sbjct: 562 VIKLISKVYDREIIVRDRSRFHHFKGGECSCKDYW 596



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 132/300 (44%), Gaps = 13/300 (4%)

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
           RR        +    L +C  L  +  G+ +H E  K GL + V V N+L+  Y   G  
Sbjct: 112 RRRLAPPDTHTYPPLLQACTRLLALREGESLHAEAAKNGLVALVFVKNSLVHHYGACGLF 171

Query: 409 SRCLKVFFLMP--EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
               +VF  +P  E + VSWNSV+  FA +    +E +  + +   A   P+G T +++L
Sbjct: 172 ESAHRVFDEIPVLERNLVSWNSVMNGFA-ANGRPNEVLTIFRETLEADLMPDGFTIVSVL 230

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
            A +      LG +VH    K  +   + + NAL+  Y KCG ++D  K+F  M   R  
Sbjct: 231 TACAEIGALTLGRRVHVFASKVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVARTV 290

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV--- 583
           VSW S+I G   N     A+ L   M +        T   VL AC+    ++ G      
Sbjct: 291 VSWTSLIVGLAGNGFGKDALELFGLMERERLIPTDITMVGVLYACSHCGLVDDGFRYFNE 350

Query: 584 --HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARH 640
                G+   +E    +G  +VD+  + GR++ A  +   MPV  N   W +++   A H
Sbjct: 351 MQDKYGIAPGIEH---LG-CMVDLLGRAGRVEEAHNYITTMPVEPNAVVWRTLLGACAMH 406



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 152/326 (46%), Gaps = 12/326 (3%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR--FMIGKDSVSWNTMIS 330
           R+G+ +H    ++GL  +V V N LV+ Y  CG  + +  VF    ++ ++ VSWN++++
Sbjct: 137 REGESLHAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRVFDEIPVLERNLVSWNSVMN 196

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           G   NG   E +  F       LM   F+++S L++CA +G + LG+++H    K+GL  
Sbjct: 197 GFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGALTLGRRVHVFASKVGLVG 256

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
           +  V NAL+ LYA  G +    KVF  M      VSW S+I   A +     +A++ +  
Sbjct: 257 NSHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGN-GFGKDALELFGL 315

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCG 508
           M R    P  +T + +L A S   +   G +   ++  KY +A        ++   G+ G
Sbjct: 316 MERERLIPTDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLGRAG 375

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL-LPKAMNLVWFMMQRGQRLDHFTFAT 566
            +++       M    + V W +++    +H +L L +A       +  G   D+   + 
Sbjct: 376 RVEEAHNYITTMPVEPNAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSN 435

Query: 567 VLSAC---ASVATLERGMEVHACGVR 589
           + +A    A    L + M  H  GVR
Sbjct: 436 LYAAVGRWADAHVLRKTMATH--GVR 459



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 155/349 (44%), Gaps = 21/349 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVS 59
           ++ +  H +  K+G    VF+ N+L++ Y   G   SA ++FDE+P  +RN VSW  +++
Sbjct: 137 REGESLHAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRVFDEIPVLERNLVSWNSVMN 196

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           G+   G  NE   +F+E + A  + + + + SVL AC E G      G +VH    K   
Sbjct: 197 GFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIG--ALTLGRRVHVFASKVGL 254

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIET-RDLISWNSIISVYSQRGDTISVFKLF 178
             +  V N LI +Y  C    D A ++FEE+   R ++SW S+I   +  G      +LF
Sbjct: 255 VGNSHVGNALIDLYAKCGGVED-AWKVFEEMGVARTVVSWTSLIVGLAGNGFGKDALELF 313

Query: 179 SRMQREGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
             M+RE     L P + T  G L   ++  ++   +  +    M  K G+   +     +
Sbjct: 314 GLMERE----RLIPTDITMVGVLYACSHCGLVDDGF--RYFNEMQDKYGIAPGIEHLGCM 367

Query: 238 VSGFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGN 295
           V    R G    A      M ++ N V    L+      K++  G    + L ++    +
Sbjct: 368 VDLLGRAGRVEEAHNYITTMPVEPNAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHS 427

Query: 296 G----LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD-QNGCYE 339
           G    L N+YA  G   D+  V R  +    V  N   S ++ +N  YE
Sbjct: 428 GDYVLLSNLYAAVGRWADAH-VLRKTMATHGVRKNPGHSLVELRNSVYE 475


>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 250/695 (35%), Positives = 380/695 (54%), Gaps = 80/695 (11%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           + G   H Y+++ G  D   + N +++MYAK G +D +R++F  M  +    WN+MISG 
Sbjct: 112 KSGNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGC 171

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            ++G   EA++ F  M    +++                W                    
Sbjct: 172 WKSGNETEAVVLFNMMPARNIIT----------------W-------------------- 195

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
               ++++ YA  G L    + F  MPE   VSWN++  A+A  E    EA+  +  M  
Sbjct: 196 ---TSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKEC-PKEALNLFHQMLE 251

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G +P+  T++  +++ SS     L   +   + + ++   + ++ ALL  + K G ++ 
Sbjct: 252 EGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEI 311

Query: 513 CEKIFARMSERRDEVSWNSMISGY-------IHNEL---LPKAMNLVWFMM-----QRGQ 557
              IF  +  +R+ V+WN MIS Y       +  EL   +PK   + W  M     Q G+
Sbjct: 312 ARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGE 371

Query: 558 -----------------RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
                            + D  T A+VLSAC  +  L+    V        ++  +   +
Sbjct: 372 SAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFN 431

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           +L+ MYSKCG +  A R F  M  R+V S+N++ISG+A +GHG +A+ L   M+ +G  P
Sbjct: 432 SLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEP 491

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           DHVT++GVL+ACSHAGL++EG   FKS+       P ++ ++CMVDLLGRAGELD+ +  
Sbjct: 492 DHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKML 546

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           I  MP+ P++ ++ ++L A  R + ++  LG  AA+ LFE+EPQN  NYVLL+N+YAS G
Sbjct: 547 IQSMPMKPHAGVYGSLLNA-SRIH-KRVGLGELAASKLFELEPQNLGNYVLLSNIYASFG 604

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
           +WEDV + R+ MK+  +KK  G SWV  K  VH F  GD SH +   IY+ L EL +KM+
Sbjct: 605 RWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMK 664

Query: 841 DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHS 899
             G+V     AL D+E E KE+++  HSEK+A+ F +L       IR++KNLR+C DCH+
Sbjct: 665 RVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHT 724

Query: 900 AFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           A K ISK+ GREIV+RD+NRFH F++G CSC DYW
Sbjct: 725 AIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 134/599 (22%), Positives = 245/599 (40%), Gaps = 113/599 (18%)

Query: 2   KDAKLFHLQILKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +  + FH  ++ +   +++ ++   LIN        A    +F   P  ++  ++C++  
Sbjct: 15  RQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKY 74

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y+  G  N+   +FK           +    +++     G SG  F    H  VLK    
Sbjct: 75  YSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLA---GKSGNMF----HAYVLKLGHI 127

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS----------------- 163
            D  + N ++ MY    +  D AR +FE++  R L  WNS+IS                 
Sbjct: 128 DDHFIRNAILDMYAKNGQ-VDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNM 186

Query: 164 --------------VYSQRGDTISVFKLFSRM----------------QREGFRYSLK-- 191
                          Y++ GD  S  + F  M                Q+E  + +L   
Sbjct: 187 MPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLF 246

Query: 192 ---------PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
                    P++ T+  ++T +  S +    L   IL M+ +  ++ + +V +AL+   A
Sbjct: 247 HQMLEEGITPDDTTW--VVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHA 304

Query: 243 RLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
           + GN   AR IF+++  Q+N V+                              N +++ Y
Sbjct: 305 KFGNLEIARNIFDELGSQRNAVTW-----------------------------NIMISAY 335

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR-DGLMSSNFSL 360
            + G +  +R +F  M  +D VSWN+MI+G  QNG    +I  F  M     +     ++
Sbjct: 336 TRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTI 395

Query: 361 ISTLSSCASLGWIMLG----QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
            S LS+C  +G + L       +  + +KLG    +S  N+L+ +Y+  G ++   ++F 
Sbjct: 396 ASVLSACGHIGALKLSYWVLDIVREKNIKLG----ISGFNSLIFMYSKCGSVADAHRIFQ 451

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            M   D VS+N++I  FA +     EA+K  L M   G  P+ VT+I +L A S   +  
Sbjct: 452 TMGTRDVVSFNTLISGFA-ANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLN 510

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
            G  V   +    V +   + + L    G+ GE+D+ + +   M  +     + S+++ 
Sbjct: 511 EGKNVFKSIQAPTVDHYACMVDLL----GRAGELDEAKMLIQSMPMKPHAGVYGSLLNA 565



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 165/379 (43%), Gaps = 72/379 (18%)

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
           DA   S  LK +  M  H+QV     +  F  + +L         ++R     P    +I
Sbjct: 64  DASVYSCMLKYYSRMGAHNQV-----VSLFKCTHSL---------NLR-----PQPFVYI 104

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
            ++  A     GK G+  HA V+K    ++  I NA+L  Y K G++D    +F +M+ER
Sbjct: 105 YLIKLA-----GKSGNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAER 159

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
                WNSMISG              W   + G   +      ++ A             
Sbjct: 160 -TLADWNSMISG-------------CW---KSGNETEAVVLFNMMPA------------- 189

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
                      +++  +++V  Y+K G ++ A R+FD MP R+V SWN+M S YA+    
Sbjct: 190 ----------RNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECP 239

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC 703
            +AL LF QM  +G  PD  T+V  +S+CS  G         + + Q + ++    + + 
Sbjct: 240 KEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVK-TA 298

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP 763
           ++D+  + G L+      +++    N++ W  ++ A  R    K  L R+    LF+  P
Sbjct: 299 LLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVG--KLSLARE----LFDNMP 352

Query: 764 Q-NAVNYVLLANMYASGGK 781
           + + V++  +   YA  G+
Sbjct: 353 KRDVVSWNSMIAGYAQNGE 371


>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
          Length = 648

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 231/652 (35%), Positives = 366/652 (56%), Gaps = 21/652 (3%)

Query: 300 MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN-F 358
           MY KCG +D +  VF  M  ++ VSW  ++ G  ++G     +     MR     + N +
Sbjct: 1   MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           +L ++L +C  +G    G  IHG  ++ G      V+++L+ +Y+  G +    +VF   
Sbjct: 61  TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120

Query: 419 PEHDQV-SWNSVIGAFADSEALVSEAVKYYLDMRR--AGWSPNGVTFINILAAASSFSMG 475
                + +WN+++  +A +     +A+  + +MRR      P+  TF ++L A S     
Sbjct: 121 GLGSGIATWNAMVSGYAHA-GHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGAT 179

Query: 476 KLGHQVHAQVIK--YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           + G QVHA +    ++ A+   +  AL+  Y KC  +    ++F R+ ER++ + W +++
Sbjct: 180 REGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERL-ERKNVIQWTAVV 238

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
            G+     + +A+ L     + G R D    ++V+   A  A +E+G +VH  G++    
Sbjct: 239 VGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTG 298

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
            DV  G+++VDMY KCG  D A R F  M   NV SW +M++G  +HG G +A+ LF +M
Sbjct: 299 TDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEM 358

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGE 713
           +  G  PD VT++ +LSACSHAGLVDE  ++F  + +   + P+ E ++CMVDLLGRAGE
Sbjct: 359 RAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGE 418

Query: 714 LDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLA 773
           L +  + I  MP+ P   +W+T+L A CR + +   +GR+A ++L  M+  N VNYV L+
Sbjct: 419 LREARDLIRTMPMEPTVGVWQTLLSA-CRVH-KDVAVGREAGDVLLAMDGDNPVNYVTLS 476

Query: 774 NMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG---DESHPEKDLIYE 830
           N+ A  G+W +  K R AM+   +KK+ GCSWV +   VH F  G   +E+HP+   I  
Sbjct: 477 NVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRR 536

Query: 831 KLKELNQKMRDA-GY-VPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNS------K 882
            L+++  +MR+  GY     +FAL D++ ES+ + +  HSE++AV   L RN        
Sbjct: 537 VLRDMETRMREQLGYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHG 596

Query: 883 LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            PIR+ KNLRVCGDCH  FK +S +V R +V+RD+NRFH F  G CSC DYW
Sbjct: 597 EPIRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 648



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 130/499 (26%), Positives = 222/499 (44%), Gaps = 69/499 (13%)

Query: 29  VYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAG-FLLNRY 87
           +YV+ G+L  A ++F  M DRN VSW  ++ G+   G +    ++  EM  A     N Y
Sbjct: 1   MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60

Query: 88  ALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIF 147
            L + L+AC  C       G+ +H L +++      +V++ L+ +Y       D ARR+F
Sbjct: 61  TLSASLKAC--CVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGD-ARRVF 117

Query: 148 EEIE-TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS 206
           +       + +WN+++S Y+  G       +F  M+R   ++  +P+E+TF SL+ A   
Sbjct: 118 DGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQH--QPDEFTFASLLKAC-- 173

Query: 207 SVLSGSYLLQQILAMVKKAGL--LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS 264
           S L  +    Q+ A +  +G    S+  +  ALV  + +      A ++FE++ +KNV+ 
Sbjct: 174 SGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQ 233

Query: 265 MNGLMEG--------------RR---------------------------KGKEVHGYLI 283
              ++ G              RR                           +G++VH Y I
Sbjct: 234 WTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGI 293

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
           +      V+ GN +V+MY KCG  D++  +FR M   + VSW TM++GL ++G   EA+ 
Sbjct: 294 KDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVA 353

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN------A 397
            F  MR  G+     + ++ LS+C+  G +   ++         +  D +V         
Sbjct: 354 LFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFS-----CIRRDRTVRPKAEHYAC 408

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA--FADSEALVSEAVKYYLDMRRAG 454
           ++ L   AG L     +   MP    V  W +++ A       A+  EA    L M   G
Sbjct: 409 MVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAM--DG 466

Query: 455 WSP-NGVTFINILAAASSF 472
            +P N VT  N+LA A  +
Sbjct: 467 DNPVNYVTLSNVLAEAGEW 485



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/485 (21%), Positives = 197/485 (40%), Gaps = 52/485 (10%)

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY  C E  D A  +F  +  R+++SW +++  + + GD     +L   M+         
Sbjct: 1   MYVKCGE-LDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTAS---EAA 56

Query: 192 PNEYTFGSLITAA------------YSSVLSGSYLLQQILA------------------M 221
           PNEYT  + + A             +   +   Y    ++A                  +
Sbjct: 57  PNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRV 116

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI------QKNVVSMNGLMEG---- 271
              AGL S +   +A+VSG+A  G+   A  +F +M       Q +  +   L++     
Sbjct: 117 FDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGL 176

Query: 272 --RRKGKEVHGYLIRSGLFDM--VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
              R+G +VH  +  SG        +   LV+MY KC  +  +  VF  +  K+ + W  
Sbjct: 177 GATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTA 236

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           ++ G  Q G   EA+  F    R G    +  L S +   A    +  G+Q+H  G+K  
Sbjct: 237 VVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDP 296

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
             +DVS  N+++ +Y   G      ++F  M   + VSW +++        L  EAV  +
Sbjct: 297 TGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLG-KHGLGREAVALF 355

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA-LLSCYGK 506
            +MR  G  P+ VT++ +L+A S   +     +  + + +           A ++   G+
Sbjct: 356 EEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGR 415

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL-LPKAMNLVWFMMQRGQRLDHFTF 564
            GE+ +   +   M        W +++S   +H ++ + +    V   M     +++ T 
Sbjct: 416 AGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTL 475

Query: 565 ATVLS 569
           + VL+
Sbjct: 476 SNVLA 480



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 85/384 (22%), Positives = 164/384 (42%), Gaps = 50/384 (13%)

Query: 1   SKDAKLFHLQILKHGF--AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIV 58
           +++    H  +   GF  A +  L   L+++YV+   L  A ++F+ +  +N + W  +V
Sbjct: 179 TREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVV 238

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
            G+  +G   EA ++F+   R+G   + + L SV+    +      + G QVHC  +K  
Sbjct: 239 VGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFAL--VEQGRQVHCYGIKDP 296

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
              D    N ++ MY  C    D A R+F E+   +++SW ++++   + G       LF
Sbjct: 297 TGTDVSAGNSIVDMYLKC-GLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALF 355

Query: 179 SRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
             M+  G    ++P+E T+ +L++A +++ ++         +   +     ++ Y  + +
Sbjct: 356 EEMRAGG----VEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHY--ACM 409

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSM-NGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
           V    R G    AR +   M  +  V +   L+   R  K+             VAVG  
Sbjct: 410 VDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKD-------------VAVGR- 455

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
                       ++  V   M G + V++ T+ + L + G + E      AMRR GL   
Sbjct: 456 ------------EAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRGLKKQ 503

Query: 357 NFSLISTLSSCASLGWIMLGQQIH 380
                     C+   W+ +G+++H
Sbjct: 504 G--------GCS---WVEVGKEVH 516


>gi|302795364|ref|XP_002979445.1| hypothetical protein SELMODRAFT_110780 [Selaginella moellendorffii]
 gi|300152693|gb|EFJ19334.1| hypothetical protein SELMODRAFT_110780 [Selaginella moellendorffii]
          Length = 637

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 230/609 (37%), Positives = 350/609 (57%), Gaps = 15/609 (2%)

Query: 336 GCYEEAIMNFCAMRRDGLMSSN--FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           G  +  I+N C    D   S     +  S L  CAS   + LGQ +H E  +   D    
Sbjct: 34  GLLKATILNLCKNSGDDPSSKPDLETYASLLRQCASARALDLGQLLHEEIARRRFDGYTF 93

Query: 394 VSNALLSLYADAGYLSRCLKVF-FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
           + N L+++Y   G + R  K F  +   ++ VSWNS+I  +A + A   EA+K +  M  
Sbjct: 94  LGNTLITMYGSCGDVDRAKKAFDRIDSRNNTVSWNSMIAGYAQN-AFSKEALKLFKAMDL 152

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC----- 507
            G+ PN VTF++ L AA +      G  +H +V++++   +T +  AL++ +GKC     
Sbjct: 153 QGFQPNKVTFVSALDAAGNLGALPEGSAIHEEVLEHDCETDTAVATALINFFGKCPYCQS 212

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
           G+    + IF RM +R D+VSW++++  Y  +     +M L   M   G +   FTF +V
Sbjct: 213 GDPHQVQAIFDRMRDR-DDVSWSTLVGAYAQSNQHRTSMELFKKMDVEGYKPTRFTFMSV 271

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           + AC  ++ L  G  +H+  + + L++DVV+ + +V+M+ +CG ++ +S  F  M  R+ 
Sbjct: 272 VDACGKLSALREGRVLHSSIMNSALKWDVVLQNGIVNMFGRCGSVEESSSAFQEMLQRDA 331

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            SW+ MIS +A +GHG +AL  F  M LDG  PD +TFV +LS C+HAGL+ +   H   
Sbjct: 332 VSWSIMISAFAHNGHGAEALETFLAMNLDGQTPDELTFVSILSVCAHAGLLRDARGHLVD 391

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           M   Y L+P L+ + C+VDLL R+G L   EE +  MP  P+   W T+L AC      K
Sbjct: 392 MVGDYALVPGLDHYVCLVDLLCRSGRLGAAEELVETMPYEPHGSAWLTLLAACKMQGDLK 451

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
              G +        +P  +  Y LL+++YA   +  ++   RKAM+E  +KK+AGCS++ 
Sbjct: 452 R--GARVGKSFLATDPDTSAPYALLSSIYAEAKRVNEMRIVRKAMEERGIKKQAGCSYIE 509

Query: 808 MKDGVHVFVAGDESHP-EKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSY 866
           + D VH F AG+ SHP  +D++YE L ++ +KM +AG V  T+   +DLE E KE+L++Y
Sbjct: 510 VHDRVHEFKAGEVSHPRHRDILYE-LMQIQRKMVEAGCVRDTRLVSYDLEEEEKENLLTY 568

Query: 867 HSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFND 925
           HSEK+A+   ++T      +R++KNLRVC DCH+A KFIS+I GR IV+RD NRFHHF D
Sbjct: 569 HSEKLAIGLGLVTTRPGTELRVVKNLRVCSDCHTAIKFISRICGRRIVVRDCNRFHHFED 628

Query: 926 GKCSCGDYW 934
           G CSC DYW
Sbjct: 629 GVCSCNDYW 637



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 191/397 (48%), Gaps = 34/397 (8%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF-RFMIGKDSVSWNTMISGLD 333
           G+ +H  + R        +GN L+ MY  CG +D ++  F R     ++VSWN+MI+G  
Sbjct: 76  GQLLHEEIARRRFDGYTFLGNTLITMYGSCGDVDRAKKAFDRIDSRNNTVSWNSMIAGYA 135

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           QN   +EA+  F AM   G   +  + +S L +  +LG +  G  IH E L+   ++D +
Sbjct: 136 QNAFSKEALKLFKAMDLQGFQPNKVTFVSALDAAGNLGALPEGSAIHEEVLEHDCETDTA 195

Query: 394 VSNALLSL-----YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           V+ AL++      Y  +G   +   +F  M + D VSW++++GA+A S    + +++ + 
Sbjct: 196 VATALINFFGKCPYCQSGDPHQVQAIFDRMRDRDDVSWSTLVGAYAQSNQHRT-SMELFK 254

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            M   G+ P   TF++++ A    S  + G  +H+ ++   +  +  ++N +++ +G+CG
Sbjct: 255 KMDVEGYKPTRFTFMSVVDACGKLSALREGRVLHSSIMNSALKWDVVLQNGIVNMFGRCG 314

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
            +++    F  M + RD VSW+ MIS + HN    +A+     M   GQ  D  TF ++L
Sbjct: 315 SVEESSSAFQEMLQ-RDAVSWSIMISAFAHNGHGAEALETFLAMNLDGQTPDELTFVSIL 373

Query: 569 SACASVATLE--RGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLM 622
           S CA    L   RG  V   G     ++ +V G      LVD+  + GR+  A    + M
Sbjct: 374 SVCAHAGLLRDARGHLVDMVG-----DYALVPGLDHYVCLVDLLCRSGRLGAAEELVETM 428

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           P                  HG   LTL +  K+ G L
Sbjct: 429 PYEP---------------HGSAWLTLLAACKMQGDL 450



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 187/406 (46%), Gaps = 76/406 (18%)

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG--LVSNVLIAMYGSCLESTD 141
           L  YA  S+LR C          G  +H  + +  + FDG   + N LI MYGSC +  D
Sbjct: 57  LETYA--SLLRQC--ASARALDLGQLLHEEIAR--RRFDGYTFLGNTLITMYGSCGD-VD 109

Query: 142 CARRIFEEIETRD-LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
            A++ F+ I++R+  +SWNS+I+ Y+Q   +    KLF  M  +GF    +PN+ TF S 
Sbjct: 110 RAKKAFDRIDSRNNTVSWNSMIAGYAQNAFSKEALKLFKAMDLQGF----QPNKVTFVSA 165

Query: 201 ITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL-----GNFYYARKI 253
           + AA    ++  GS + +++L    +    +D  V +AL++ F +      G+ +  + I
Sbjct: 166 LDAAGNLGALPEGSAIHEEVL----EHDCETDTAVATALINFFGKCPYCQSGDPHQVQAI 221

Query: 254 FEQMIQKN-----------------------------------------VVSMNGLMEGR 272
           F++M  ++                                         VV   G +   
Sbjct: 222 FDRMRDRDDVSWSTLVGAYAQSNQHRTSMELFKKMDVEGYKPTRFTFMSVVDACGKLSAL 281

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R+G+ +H  ++ S L   V + NG+VNM+ +CG++++S S F+ M+ +D+VSW+ MIS  
Sbjct: 282 REGRVLHSSIMNSALKWDVVLQNGIVNMFGRCGSVEESSSAFQEMLQRDAVSWSIMISAF 341

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM-----LGQQIHGEGLKLG 387
             NG   EA+  F AM  DG      + +S LS CA  G +      L   +    L  G
Sbjct: 342 AHNGHGAEALETFLAMNLDGQTPDELTFVSILSVCAHAGLLRDARGHLVDMVGDYALVPG 401

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           LD  V     L+ L   +G L    ++   MP E    +W +++ A
Sbjct: 402 LDHYV----CLVDLLCRSGRLGAAEELVETMPYEPHGSAWLTLLAA 443



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 193/428 (45%), Gaps = 50/428 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRN-SVSWACIVSGYTH 63
           +L H +I +  F    FL NTLI +Y   GD+  A K FD +  RN +VSW  +++GY  
Sbjct: 77  QLLHEEIARRRFDGYTFLGNTLITMYGSCGDVDRAKKAFDRIDSRNNTVSWNSMIAGYAQ 136

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
              S EA K+FK M   GF  N+    S L A    G      G  +H  VL+ +   D 
Sbjct: 137 NAFSKEALKLFKAMDLQGFQPNKVTFVSALDAAGNLG--ALPEGSAIHEEVLEHDCETDT 194

Query: 124 LVSNVLIAMYGSC--LESTDC--ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
            V+  LI  +G C   +S D    + IF+ +  RD +SW++++  Y+Q     +  +LF 
Sbjct: 195 AVATALINFFGKCPYCQSGDPHQVQAIFDRMRDRDDVSWSTLVGAYAQSNQHRTSMELFK 254

Query: 180 RMQREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           +M  EG+    KP  +TF S++ A    S++  G  L   I+     + L  D+ + + +
Sbjct: 255 KMDVEGY----KPTRFTFMSVVDACGKLSALREGRVLHSSIM----NSALKWDVVLQNGI 306

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGLFDMVAVG 294
           V+ F R G+   +   F++M+Q++ VS + ++        G E     +   L       
Sbjct: 307 VNMFGRCGSVEESSSAFQEMLQRDAVSWSIMISAFAHNGHGAEALETFLAMNLDGQTPDE 366

Query: 295 NGLVNMYAKC---GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
              V++ + C   G + D+R     M+G        ++ GLD   C  + +       R 
Sbjct: 367 LTFVSILSVCAHAGLLRDARGHLVDMVGD-----YALVPGLDHYVCLVDLLC------RS 415

Query: 352 GLMSSNFSLIST-------------LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           G + +   L+ T             L++C   G +  G ++ G+   L  D D S   AL
Sbjct: 416 GRLGAAEELVETMPYEPHGSAWLTLLAACKMQGDLKRGARV-GKSF-LATDPDTSAPYAL 473

Query: 399 L-SLYADA 405
           L S+YA+A
Sbjct: 474 LSSIYAEA 481



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 143/327 (43%), Gaps = 52/327 (15%)

Query: 189 SLKPNEYTFGSLI-TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           S KP+  T+ SL+   A +  L    LL + +A  +  G     ++G+ L++ +   G+ 
Sbjct: 52  SSKPDLETYASLLRQCASARALDLGQLLHEEIARRRFDGYT---FLGNTLITMYGSCGDV 108

Query: 248 YYARKIFEQMIQKN-VVSMNGLMEGRRK-------------------------------- 274
             A+K F+++  +N  VS N ++ G  +                                
Sbjct: 109 DRAKKAFDRIDSRNNTVSWNSMIAGYAQNAFSKEALKLFKAMDLQGFQPNKVTFVSALDA 168

Query: 275 ---------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKC-----GTIDDSRSVFRFMIGK 320
                    G  +H  ++        AV   L+N + KC     G     +++F  M  +
Sbjct: 169 AGNLGALPEGSAIHEEVLEHDCETDTAVATALINFFGKCPYCQSGDPHQVQAIFDRMRDR 228

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D VSW+T++    Q+  +  ++  F  M  +G   + F+ +S + +C  L  +  G+ +H
Sbjct: 229 DDVSWSTLVGAYAQSNQHRTSMELFKKMDVEGYKPTRFTFMSVVDACGKLSALREGRVLH 288

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
              +   L  DV + N +++++   G +      F  M + D VSW+ +I AFA +    
Sbjct: 289 SSIMNSALKWDVVLQNGIVNMFGRCGSVEESSSAFQEMLQRDAVSWSIMISAFAHN-GHG 347

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILA 467
           +EA++ +L M   G +P+ +TF++IL+
Sbjct: 348 AEALETFLAMNLDGQTPDELTFVSILS 374



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ ++ H  I+     +DV L N ++N++ R G +  +S  F EM  R++VSW+ ++S +
Sbjct: 282 REGRVLHSSIMNSALKWDVVLQNGIVNMFGRCGSVEESSSAFQEMLQRDAVSWSIMISAF 341

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            H G   EA + F  M   G   +     S+L  C   G
Sbjct: 342 AHNGHGAEALETFLAMNLDGQTPDELTFVSILSVCAHAG 380


>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 250/695 (35%), Positives = 380/695 (54%), Gaps = 80/695 (11%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           + G   H Y+++ G  D   + N +++MYAK G +D +R++F  M  +    WN+MISG 
Sbjct: 112 KSGNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGC 171

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            ++G   EA++ F  M    +++                W                    
Sbjct: 172 WKSGNETEAVVLFNMMPARNIIT----------------W-------------------- 195

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
               ++++ YA  G L    + F  MPE   VSWN++  A+A  E    EA+  +  M  
Sbjct: 196 ---TSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKEC-PKEALNLFHQMLE 251

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G +P+  T++  +++ SS     L   +   + + ++   + ++ ALL  + K G ++ 
Sbjct: 252 EGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEI 311

Query: 513 CEKIFARMSERRDEVSWNSMISGY-------IHNEL---LPKAMNLVWFMM-----QRGQ 557
              IF  +  +R+ V+WN MIS Y       +  EL   +PK   + W  M     Q G+
Sbjct: 312 ARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGE 371

Query: 558 -----------------RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
                            + D  T A+VLSAC  +  L+    V        ++  +   +
Sbjct: 372 SAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFN 431

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           +L+ MYSKCG +  A R F  M  R+V S+N++ISG+A +GHG +A+ L   M+ +G  P
Sbjct: 432 SLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEP 491

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           DHVT++GVL+ACSHAGL++EG   FKS+       P ++ ++CMVDLLGRAGELD+ +  
Sbjct: 492 DHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKML 546

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           I  MP+ P++ ++ ++L A  R + ++  LG  AA+ LFE+EPQN  NYVLL+N+YAS G
Sbjct: 547 IQSMPMKPHAGVYGSLLNA-SRIH-KRVGLGELAASKLFELEPQNLGNYVLLSNIYASFG 604

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
           +WEDV + R+ MK+  +KK  G SWV  K  VH F  GD SH +   IY+ L EL +KM+
Sbjct: 605 RWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMK 664

Query: 841 DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHS 899
             G+V     AL D+E E KE+++  HSEK+A+ F +L       IR++KNLR+C DCH+
Sbjct: 665 RVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHT 724

Query: 900 AFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           A K ISK+ GREIV+RD+NRFH F++G CSC DYW
Sbjct: 725 AIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 134/599 (22%), Positives = 245/599 (40%), Gaps = 113/599 (18%)

Query: 2   KDAKLFHLQILKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +  + FH  ++ +   +++ ++   LIN        A    +F   P  ++  ++C++  
Sbjct: 15  RQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKY 74

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           Y+  G  N+   +FK           +    +++     G SG  F    H  VLK    
Sbjct: 75  YSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLA---GKSGNLF----HAYVLKLGHI 127

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS----------------- 163
            D  + N ++ MY    +  D AR +FE++  R L  WNS+IS                 
Sbjct: 128 DDHFIRNAILDMYAKNGQ-VDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNM 186

Query: 164 --------------VYSQRGDTISVFKLFSRM----------------QREGFRYSLK-- 191
                          Y++ GD  S  + F  M                Q+E  + +L   
Sbjct: 187 MPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLF 246

Query: 192 ---------PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
                    P++ T+  ++T +  S +    L   IL M+ +  ++ + +V +AL+   A
Sbjct: 247 HQMLEEGITPDDTTW--VVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHA 304

Query: 243 RLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
           + GN   AR IF+++  Q+N V+                              N +++ Y
Sbjct: 305 KFGNLEIARNIFDELGSQRNAVTW-----------------------------NIMISAY 335

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR-DGLMSSNFSL 360
            + G +  +R +F  M  +D VSWN+MI+G  QNG    +I  F  M     +     ++
Sbjct: 336 TRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTI 395

Query: 361 ISTLSSCASLGWIMLG----QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
            S LS+C  +G + L       +  + +KLG    +S  N+L+ +Y+  G ++   ++F 
Sbjct: 396 ASVLSACGHIGALKLSYWVLDIVREKNIKLG----ISGFNSLIFMYSKCGSVADAHRIFQ 451

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            M   D VS+N++I  FA +     EA+K  L M   G  P+ VT+I +L A S   +  
Sbjct: 452 TMGTRDVVSFNTLISGFA-ANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLN 510

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
            G  V   +    V +   + + L    G+ GE+D+ + +   M  +     + S+++ 
Sbjct: 511 EGKNVFKSIQAPTVDHYACMVDLL----GRAGELDEAKMLIQSMPMKPHAGVYGSLLNA 565


>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 558

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 221/549 (40%), Positives = 330/549 (60%), Gaps = 11/549 (2%)

Query: 389 DSDVSVSNALLSLYADAG-YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
           +  +S+   LLS  A A   LS    VF  +P  D +++N++I +   S    S ++ Y+
Sbjct: 18  NDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRS--HSRFFPSHSLSYF 75

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
             MR  G   +  TF  +L A S     ++   +H+ ++KY + ++  ++NAL+  YG C
Sbjct: 76  FSMRSNGIPLDNFTFPFVLKACSRL---QINLHLHSLIVKYGLGSDIFVQNALICVYGYC 132

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL-DHFTFAT 566
           G ++   K+F  MSER D VSW+++I+ +++N    +A++L   M    + + D  T  +
Sbjct: 133 GSLEMAVKVFDEMSER-DSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLS 191

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           V+SA + +  LE G  V A   R      V +G+AL+DM+S+CG ID +   F+ M VRN
Sbjct: 192 VISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRN 251

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
           V +W ++I+G   HG   +AL +F  M+  G  PD+VTF GVL ACSH GLV EG+  F+
Sbjct: 252 VLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFE 311

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
           S+ +VYG+ P L+ + CMVD+LGRAG L++  +F+ +MP+ PNS+IWRT+LGAC   N  
Sbjct: 312 SIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHN-- 369

Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
              L  K    + ++      + VLL+N+Y + G+W + A  R  M+E  + KE GCS +
Sbjct: 370 NLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREKRIGKEPGCSSI 429

Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSY 866
            +   +H FV+GD SHP+ + I + L  +   +R+ GY+ QTK  L D+E E +E  +SY
Sbjct: 430 NVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKNVLHDIEEEEREHSLSY 489

Query: 867 HSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFND 925
           HSEK+AVAF +L+   K  IRIMKNLR+C DCHS  K IS    R+I++RD NRFHHF  
Sbjct: 490 HSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFERKIIIRDRNRFHHFEK 549

Query: 926 GKCSCGDYW 934
           G CSC DYW
Sbjct: 550 GLCSCHDYW 558



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 190/407 (46%), Gaps = 56/407 (13%)

Query: 109 QVHCLVLKSNQTFDGL-VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQ 167
           ++HC ++KS++  D L +  +L++   +  ES   AR +F  I + D I++N+II  +S+
Sbjct: 6   RLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRSHSR 65

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
              + S+   FS M+  G    +  + +TF  ++ A      S   +   + +++ K GL
Sbjct: 66  FFPSHSLSYFFS-MRSNG----IPLDNFTFPFVLKAC-----SRLQINLHLHSLIVKYGL 115

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL------------------- 268
            SD++V +AL+  +   G+   A K+F++M +++ VS + +                   
Sbjct: 116 GSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEK 175

Query: 269 MEGRRK-----------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
           M+   K                       G+ V  ++ R G    VA+G  L++M+++CG
Sbjct: 176 MQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCG 235

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
           +ID+S  VF  M  ++ ++W  +I+GL  +G   EA+  F +MR+ G+     +    L 
Sbjct: 236 SIDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLV 295

Query: 366 SCASLGWIMLGQQIHGEGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQ 423
           +C+  G +  G  I     K+ G+D  +     ++ +   AG L+        MP + + 
Sbjct: 296 ACSHGGLVKEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNS 355

Query: 424 VSWNSVIGAFADSEAL-VSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
           + W +++GA  +   L ++E VK  +    +  + + V   N+  AA
Sbjct: 356 IIWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAA 402



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 129/267 (48%), Gaps = 14/267 (5%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVG--DLASASKLFDEMPDRNSVSWACIVSGYTHK 64
            H  I+K     D     TL+   V      L+ A  +F  +P  +++++  I+  ++ +
Sbjct: 7   LHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRSHS-R 65

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
              + +   F  M   G  L+ +    VL+AC     S  +  + +H L++K     D  
Sbjct: 66  FFPSHSLSYFFSMRSNGIPLDNFTFPFVLKAC-----SRLQINLHLHSLIVKYGLGSDIF 120

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V N LI +YG C  S + A ++F+E+  RD +SW+++I+ +   G       LF +MQ E
Sbjct: 121 VQNALICVYGYC-GSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLE 179

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                + P+E T  S+I+A   S L    L + + A + + G    + +G+AL+  F+R 
Sbjct: 180 D---KVVPDEVTMLSVISAI--SHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRC 234

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG 271
           G+   +  +FE+M  +NV++   L+ G
Sbjct: 235 GSIDESIVVFEKMAVRNVLTWTALING 261



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 124/256 (48%), Gaps = 11/256 (4%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  I+K+G   D+F+ N LI VY   G L  A K+FDEM +R+SVSW+ +++ + + G 
Sbjct: 106 LHSLIVKYGLGSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGY 165

Query: 67  SNEACKMFKEM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
           ++EA  +F++M +    + +   + SV+ A    G    + G  V   + +        +
Sbjct: 166 ASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLG--DLELGRWVRAFIGRLGFGVSVAL 223

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
              LI M+  C  S D +  +FE++  R++++W ++I+     G ++    +F  M++ G
Sbjct: 224 GTALIDMFSRC-GSIDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSG 282

Query: 186 FRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
               ++P+  TF G L+  ++  ++   + + + +  V     L D Y    +V    R 
Sbjct: 283 ----VQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYGMDPLLDHY--GCMVDILGRA 336

Query: 245 GNFYYARKIFEQMIQK 260
           G    A    E+M  K
Sbjct: 337 GLLNEAYDFVERMPMK 352


>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 472

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 208/458 (45%), Positives = 303/458 (66%), Gaps = 6/458 (1%)

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           +VHAQV+K N    +T+  ALL  Y K G++++  K+F+ + ++ D V+W++M++GY   
Sbjct: 18  EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAGYAQT 76

Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV-ATLERGMEVHACGVRACLEFDVVI 598
                A+ +   + + G + + FTF+++L+ CA+  A++ +G + H   +++ L+  + +
Sbjct: 77  GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCV 136

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            SAL+ MY+K G I+ A   F     +++ SWNSMISGYA+HG   KAL +F +MK    
Sbjct: 137 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 196

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
             D VTF+GV +AC+HAGLV+EG K+F  M +   + P  E  SCMVDL  RAG+L+K  
Sbjct: 197 KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAM 256

Query: 719 EFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYAS 778
           + I  MP    S IWRT+L A CR + +KTELGR AA  +  M+P+++  YVLL+NMYA 
Sbjct: 257 KVIENMPNPAGSTIWRTILAA-CRVH-KKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAE 314

Query: 779 GGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQK 838
            G W++ AK RK M E  VKKE G SW+ +K+  + F+AGD SHP KD IY KL++L+ +
Sbjct: 315 SGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTR 374

Query: 839 MRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDC 897
           ++D GY P T + L D++ E KE +++ HSE++A+AF L    K  P+ I+KNLRVCGDC
Sbjct: 375 LKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDC 434

Query: 898 HSAFKFISKIVGREIVLRDSNRFHHF-NDGKCSCGDYW 934
           H   K I+KI  REIV+RDSNRFHHF +DG CSCGD+W
Sbjct: 435 HLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 472



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 133/261 (50%), Gaps = 3/261 (1%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           EVH  ++++       VG  L++ Y K G ++++  VF  +  KD V+W+ M++G  Q G
Sbjct: 18  EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 77

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM-LGQQIHGEGLKLGLDSDVSVS 395
             E AI  F  + + G+  + F+  S L+ CA+    M  G+Q HG  +K  LDS + VS
Sbjct: 78  ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 137

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           +ALL++YA  G +    +VF    E D VSWNS+I  +A       +A+  + +M++   
Sbjct: 138 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYA-QHGQAMKALDVFKEMKKRKV 196

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKY-NVANETTIENALLSCYGKCGEMDDCE 514
             +GVTFI + AA +   + + G +    +++   +A      + ++  Y + G+++   
Sbjct: 197 KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAM 256

Query: 515 KIFARMSERRDEVSWNSMISG 535
           K+   M        W ++++ 
Sbjct: 257 KVIENMPNPAGSTIWRTILAA 277



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 138/318 (43%), Gaps = 17/318 (5%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q++K  +     +   L++ YV++G +  A+K+F  + D++ V+W+ +++GY   G +
Sbjct: 20  HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGET 79

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
             A KMF E+ + G   N +   S+L  C     S    G Q H   +KS       VS+
Sbjct: 80  EAAIKMFGELTKGGIKPNEFTFSSILNVCAATNAS-MGQGKQFHGFAIKSRLDSSLCVSS 138

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY     + + A  +F+    +DL+SWNS+IS Y+Q G  +    +F  M++    
Sbjct: 139 ALLTMYAK-KGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR--- 194

Query: 188 YSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
             +K +  TF  +  A   +  V  G         MV+   +       S +V  ++R G
Sbjct: 195 -KVKMDGVTFIGVFAACTHAGLVEEGEKYFD---IMVRDCKIAPTKEHNSCMVDLYSRAG 250

Query: 246 NFYYARKIFEQMIQK--NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG----LVN 299
               A K+ E M     + +    L   R   K   G L    +  M    +     L N
Sbjct: 251 QLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSN 310

Query: 300 MYAKCGTIDDSRSVFRFM 317
           MYA+ G   +   V + M
Sbjct: 311 MYAESGDWQERAKVRKLM 328



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 124/283 (43%), Gaps = 50/283 (17%)

Query: 194 EYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKI 253
           E+T+  ++TA    V+S S    ++ A V K        VG+AL+  + +LG    A K+
Sbjct: 1   EFTYSVILTAL--PVISPS----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKV 54

Query: 254 FEQMIQKNVVSMNGLMEGRRK--------------------------------------- 274
           F  +  K++V+ + ++ G  +                                       
Sbjct: 55  FSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNAS 114

Query: 275 ---GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
              GK+ HG+ I+S L   + V + L+ MYAK G I+ +  VF+    KD VSWN+MISG
Sbjct: 115 MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISG 174

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
             Q+G   +A+  F  M++  +     + I   ++C   G +  G++     ++    + 
Sbjct: 175 YAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 234

Query: 392 VSVSNA-LLSLYADAGYLSRCLKVFFLMPEH-DQVSWNSVIGA 432
               N+ ++ LY+ AG L + +KV   MP       W +++ A
Sbjct: 235 TKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAA 277



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 99/183 (54%), Gaps = 18/183 (9%)

Query: 92  VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE 151
           +L A     PS      +VH  V+K+N      V   L+  Y   L   + A ++F  I+
Sbjct: 7   ILTALPVISPS------EVHAQVVKTNYERSSTVGTALLDAYVK-LGKVEEAAKVFSGID 59

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI---TAAYSSV 208
            +D+++W+++++ Y+Q G+T +  K+F  + + G    +KPNE+TF S++    A  +S+
Sbjct: 60  DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG----IKPNEFTFSSILNVCAATNASM 115

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
             G    +Q      K+ L S L V SAL++ +A+ GN   A ++F++  +K++VS N +
Sbjct: 116 GQG----KQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSM 171

Query: 269 MEG 271
           + G
Sbjct: 172 ISG 174


>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
 gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
          Length = 620

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 231/624 (37%), Positives = 349/624 (55%), Gaps = 41/624 (6%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN----------- 396
           M+ +G        +  L +CA+ G +  G+QIH   +  GL S++ +SN           
Sbjct: 1   MQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQD 60

Query: 397 --------------------ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
                               A+L++YA  G  S+ L VF  MP  D VSWN+VI A   +
Sbjct: 61  VPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGN 120

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA-NETT 495
                +A++ +  M   G   N  T +++L A       KL  Q+HA+        N T 
Sbjct: 121 SKF-QDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTA 179

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP--KAMNLVWFMM 553
           + N++++ Y +CG + D +K F  + E +  V+W+ M++ Y  ++     +A      M 
Sbjct: 180 VGNSVVNMYARCGSLLDTKKAFDSL-EEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEME 238

Query: 554 QRGQRLDHFTFATVLSACASVATLERGMEVHA-CGVRACLEFDVVIGSALVDMYSKCGRI 612
             G +    TF + L ACA++ATLE G  +H        +E  +V+G+ +++MY KCG  
Sbjct: 239 AEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSP 298

Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
             A   FD MP + + SWNS+I  YA +GH  +AL+   +M L G  PD  T V +L   
Sbjct: 299 SDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGL 358

Query: 673 SHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPI-TPNSL 731
           SHAGL++ G +HF+S  Q +GL P   Q  C+VDLL R G LD  EE I   P    +++
Sbjct: 359 SHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTI 418

Query: 732 IWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKA 791
            W T+L AC   +    + G + A  +FE+EPQ++ ++V+LAN+YAS G+W D ++ RK 
Sbjct: 419 AWMTLLAAC--KSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKM 476

Query: 792 MKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFA 851
           M+   VKKE GCSW+ +   VH F++G+  HP+   I E+L++L  +MR+AGYVP T   
Sbjct: 477 MERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEELEKLTLRMREAGYVPDTTNV 536

Query: 852 LFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGR 910
           + D+E   KE+++S HSE++A+ F +++      IR++KNLRVC DCH+A K IS +VGR
Sbjct: 537 VHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGR 596

Query: 911 EIVLRDSNRFHHFNDGKCSCGDYW 934
           EIV+RDS+RFHHF  G+CSCGD+W
Sbjct: 597 EIVVRDSSRFHHFKHGQCSCGDFW 620



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 190/410 (46%), Gaps = 38/410 (9%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKC------------------------------ 304
           G+++H  ++ SGL   + + N LVNMY KC                              
Sbjct: 29  GRQIHSSVVDSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQ 88

Query: 305 -GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST 363
            G    +  VF  M  KD VSWN +I+    N  +++A+  F  M  +GL S+ F+L+S 
Sbjct: 89  NGCWSQALHVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSL 148

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSD-VSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
           L +C  L  + L +QIH      G   +  +V N+++++YA  G L    K F  + E  
Sbjct: 149 LEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDTKKAFDSLEEKG 208

Query: 423 QVSWNSVIGAFADS-EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
            V+W+ ++ A+A S +     A K++ +M   G  P  VTF++ L A ++ +  + G  +
Sbjct: 209 LVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSM 268

Query: 482 HAQVIKYN-VANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           H +      V     + N +++ YGKCG   D + +F +M E+   +SWNS+I  Y HN 
Sbjct: 269 HRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKC-LISWNSLIVAYAHNG 327

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR-ACLEFDVVIG 599
              +A++ +  M+ +G   D  T  ++L   +    LERG+E     ++   LE      
Sbjct: 328 HALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQL 387

Query: 600 SALVDMYSKCGRIDYASRFFDLMPV--RNVYSWNSMISGYARHGHGDKAL 647
             LVD+ ++ G +D A       P    +  +W ++++    +G   + +
Sbjct: 388 KCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGI 437



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 175/418 (41%), Gaps = 87/418 (20%)

Query: 95  ACQECGPSG-FKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
           A   C  SG    G Q+H  V+ S  T + ++SN L+ MYG C +   CA ++F+ +  R
Sbjct: 16  ALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKC-QDVPCAEKVFDGMLLR 74

Query: 154 DLISWNSIISVYSQRG---------------DTIS----------------VFKLFSRMQ 182
           D++SW ++++VY+Q G               D +S                  +LF  M+
Sbjct: 75  DVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGME 134

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQI-LAMVKKAGLLSDLYVGSALVSGF 241
            EG R     NE+T  SL+ A     L    L +QI           +   VG+++V+ +
Sbjct: 135 LEGLR----SNEFTLLSLLEACGG--LEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMY 188

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLM---------EGRR------------------- 273
           AR G+    +K F+ + +K +V+ + ++          GRR                   
Sbjct: 189 ARCGSLLDTKKAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAEGIKPGEVT 248

Query: 274 ---------------KGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                           G+ +H     SG  +  + +GN ++NMY KCG+  D++ VF  M
Sbjct: 249 FVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQM 308

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             K  +SWN++I     NG   EA+ +   M   G    + + +S L   +  G +  G 
Sbjct: 309 PEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGV 368

Query: 378 QIHGEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP--EHDQVSWNSVIGA 432
           +     ++  GL+        L+ L A  G+L    ++    P  + D ++W +++ A
Sbjct: 369 EHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAA 426



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 139/302 (46%), Gaps = 48/302 (15%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H  ++  G   ++ + N+L+N+Y +  D+  A K+FD M  R+ VSW  +++ Y   
Sbjct: 30  RQIHSSVVDSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQN 89

Query: 65  GMSNEACKMFKEMVRA-------------------------------GFLLNRYALGSVL 93
           G  ++A  +F+ M R                                G   N + L S+L
Sbjct: 90  GCWSQALHVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLL 149

Query: 94  RACQECGPSGFKFGMQVHCLVLKSNQTFDGL-VSNVLIAMYGSCLESTDCARRIFEEIET 152
            AC   G    K   Q+H          +   V N ++ MY  C    D  ++ F+ +E 
Sbjct: 150 EACG--GLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLD-TKKAFDSLEE 206

Query: 153 RDLISWNSIISVYSQRGDTIS--VFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSSV 208
           + L++W+ +++ Y+Q  D      FK F  M+ EG    +KP E TF S +   AA +++
Sbjct: 207 KGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAEG----IKPGEVTFVSALDACAAMATL 262

Query: 209 LSGSYLLQQILAMVKKAGLL-SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
             G  + ++  A    +G + + L +G+ +++ + + G+   A+ +F+QM +K ++S N 
Sbjct: 263 EHGRSMHRRAAA----SGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNS 318

Query: 268 LM 269
           L+
Sbjct: 319 LI 320



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 40/214 (18%)

Query: 7   FHLQILKHGFA-YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
            H +    GF    + L NT+IN+Y + G  + A  +FD+MP++  +SW  ++  Y H G
Sbjct: 268 MHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNG 327

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQ-----ECGPSGFKFGMQVH--------- 111
            + EA    +EM+  GF  +     S+L         E G   F+  +Q H         
Sbjct: 328 HALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQL 387

Query: 112 -CLV-LKSNQTFDGLVSNVLIA-------------------MYGSCLESTDCARRIFEEI 150
            CLV L + + F      +++A                    YG       CA R+F E+
Sbjct: 388 KCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVF-EL 446

Query: 151 ETRDLISWNSIISVYSQRG---DTISVFKLFSRM 181
           E +   S+  + ++Y+  G   D   + K+  RM
Sbjct: 447 EPQHSGSFVVLANLYASVGRWSDASRIRKMMERM 480


>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
 gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 218/544 (40%), Positives = 334/544 (61%), Gaps = 18/544 (3%)

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           N L+++Y   G L     VF  MP+ + VSW ++I A++ ++ L  +A+++ + M R G 
Sbjct: 4   NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAK-LNDKALEFLVLMLREGV 62

Query: 456 SPNGVTFINILAAASS-FSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
            PN  T+ ++L A    F++     Q+H  +IK  + ++  + +AL+  Y + GE+++  
Sbjct: 63  RPNMFTYSSVLRACDGLFNL----RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENAL 118

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           ++F  M    D V W+S+I+G+  N    +A+ L   M + G      T  +VL AC  +
Sbjct: 119 RVFDEMVTG-DLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
           A LE G +VH   ++   + D+++ +AL+DMY KCG ++ A+  F  M  ++V SW++MI
Sbjct: 178 ALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMI 235

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
           +G A++G+  +AL LF  MK+ G  P++VT VGVL ACSHAGLV+EG  +F SM +++G+
Sbjct: 236 AGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGI 295

Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
            P  E + CM+DLLGRAG L +  + IN+M   P+++ WR +L A CR + R  ++   A
Sbjct: 296 DPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNA-CRVH-RNVDVAIHA 353

Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
           A  +  ++PQ+A  YVLL+N+YA+  +W DVA+ R+ M    +KKE GCSW+ +   +H 
Sbjct: 354 AKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHA 413

Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVA 874
           F+ GD SHP+   I  +L +L  K+   GYVP T F L DLE E  +D + YHSEK+A+ 
Sbjct: 414 FILGDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIV 473

Query: 875 FVLTRNSKLP----IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           F L     LP    IRI KNLR+CGDCH   K ++K+  R IV+RD  R+HHF DG CSC
Sbjct: 474 FGLM---SLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSC 530

Query: 931 GDYW 934
           GD+W
Sbjct: 531 GDFW 534



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 137/254 (53%), Gaps = 20/254 (7%)

Query: 21  FLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRA 80
           FL N LIN+YV+ G L  A  +FD+MPDRN VSW  ++S Y+   ++++A +    M+R 
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 81  GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST 140
           G   N +   SVLRAC      G     Q+HC ++K     D  V + LI +Y    E  
Sbjct: 61  GVRPNMFTYSSVLRAC-----DGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELE 115

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
           + A R+F+E+ T DL+ W+SII+ ++Q  D     +LF RM+R GF       + T  S+
Sbjct: 116 N-ALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGF----LAQQTTLTSV 170

Query: 201 ITAAYSSVLSGSYLLQ---QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
           + A      +G  LL+   Q+   V K     DL + +AL+  + + G+   A  +F +M
Sbjct: 171 LRAC-----TGLALLELGRQVHVHVLKYD--QDLILNNALLDMYCKCGSLEDANAVFVRM 223

Query: 258 IQKNVVSMNGLMEG 271
           ++K+V+S + ++ G
Sbjct: 224 VEKDVISWSTMIAG 237



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 162/343 (47%), Gaps = 42/343 (12%)

Query: 232 YVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM---------------------E 270
           ++ + L++ + + G  + A+ +F++M  +NVVS   ++                     E
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 271 GRRKG-----------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
           G R                   +++H  +I+ GL   V V + L+++Y++ G ++++  V
Sbjct: 61  GVRPNMFTYSSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           F  M+  D V W+++I+G  QN   +EA+  F  M+R G ++   +L S L +C  L  +
Sbjct: 121 FDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALL 180

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
            LG+Q+H   LK   D D+ ++NALL +Y   G L     VF  M E D +SW+++I   
Sbjct: 181 ELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGL 238

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVAN 492
           A +     EA+K +  M+  G  PN VT + +L A S   + + G +  H+    + +  
Sbjct: 239 AQN-GYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDP 297

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
                  ++   G+ G + +   +   M    D V+W ++++ 
Sbjct: 298 GREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNA 340



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 75/197 (38%), Positives = 114/197 (57%), Gaps = 9/197 (4%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  I+K G   DVF+ + LI+VY R G+L +A ++FDEM   + V W+ I++G+     
Sbjct: 85  LHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSD 144

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            +EA ++FK M RAGFL  +  L SVLRAC   G +  + G QVH  VLK +Q  D +++
Sbjct: 145 GDEALRLFKRMKRAGFLAQQTTLTSVLRACT--GLALLELGRQVHVHVLKYDQ--DLILN 200

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+ MY  C  S + A  +F  +  +D+ISW+++I+  +Q G +    KLF  M+  G 
Sbjct: 201 NALLDMYCKC-GSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLG- 258

Query: 187 RYSLKPNEYTFGSLITA 203
              +KPN  T   ++ A
Sbjct: 259 ---IKPNYVTIVGVLFA 272



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H+ +LK  +  D+ L N L+++Y + G L  A+ +F  M +++ +SW+ +++G    G S
Sbjct: 187 HVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYS 244

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            EA K+F+ M   G   N   +  VL AC   G
Sbjct: 245 KEALKLFESMKVLGIKPNYVTIVGVLFACSHAG 277


>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14050, mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/595 (37%), Positives = 342/595 (57%), Gaps = 45/595 (7%)

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           ++H + +K G D    +SN LL +Y   G + + L++F  MP  D VSW S++ A   ++
Sbjct: 24  ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAH--NK 81

Query: 438 ALVSEAVKYYLD--MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           AL+       L+      G  P+   F  I+ A SS    +LG QVHA+ +     ++  
Sbjct: 82  ALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEV 141

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLV------ 549
           ++++L+  Y KCG+ D+   +F  +   ++ VSW SMISGY  +    +AM+L       
Sbjct: 142 VKSSLIDMYTKCGQPDEARAVFDSIL-FKNSVSWTSMISGYARSGRKCEAMDLFLQAPVR 200

Query: 550 ----WF-----MMQRGQRL-----------------DHFTFATVLSACASVATLERGMEV 583
               W      ++Q G  +                 D    ++V+  CA++A LE G ++
Sbjct: 201 NLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQI 260

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           H   +    E  + I +ALVDMY+KC  I  A   F  MP ++V SW S+I G A+HG  
Sbjct: 261 HGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKA 320

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC 703
           ++ALTL+ +M L    P+ VTFVG+L ACSHAGLV  G + F+SM+  Y + P L+ ++C
Sbjct: 321 EEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTC 380

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP 763
           ++DLL R+G LD+ E  ++K+P  P+   W ++L AC R N    E+G + A+ + +++P
Sbjct: 381 LLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHN--NLEMGVRIADRVLDLKP 438

Query: 764 QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE-SH 822
           ++   Y+LL+N+YA    W  V+K RK M   EV+KE G S +       VF AG+   H
Sbjct: 439 EDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDH 498

Query: 823 PEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK 882
           P K+ I   LK+L+ +MR  GYVP T F L+D+E + KE  + +HSE++AVA+ L +   
Sbjct: 499 PMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLK--A 556

Query: 883 LP---IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +P   IRI+KNLR+CGDCH+  KFIS IV REI++RD+ R+HHF +GKCSC D+W
Sbjct: 557 VPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 203/437 (46%), Gaps = 41/437 (9%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQR 168
           ++H  ++K+      L+SN L+ +YG C      A ++F+E+  RD +SW SI++ +++ 
Sbjct: 24  ELHSQIIKAGFDKSSLLSNTLLDVYGKC-GLIPQALQLFDEMPNRDHVSWASILTAHNKA 82

Query: 169 GDTISVFKLFSRM-QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
                   + + M   +G    L+P+ + F  ++ A  S  L    L +Q+ A    +  
Sbjct: 83  LIPRRTLSMLNTMFTHDG----LQPDHFVFACIVRACSS--LGYLRLGKQVHARFMLSXF 136

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGL 287
             D  V S+L+  + + G    AR +F+ ++ KN VS   ++ G                
Sbjct: 137 CDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISG---------------- 180

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
                        YA+ G   ++  +F     ++  SW  +ISGL Q+G    +   F  
Sbjct: 181 -------------YARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNE 227

Query: 348 MRRDGL-MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
           MRR+G+ +     L S +  CA+L  + LG+QIHG  + LG +S + +SNAL+ +YA   
Sbjct: 228 MRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCS 287

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
            +     +F+ MP  D +SW S+I   A       EA+  Y +M  +   PN VTF+ +L
Sbjct: 288 DILAAKDIFYRMPRKDVISWTSIIVGTA-QHGKAEEALTLYDEMVLSRIKPNEVTFVGLL 346

Query: 467 AAASSFSMGKLGHQV-HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
            A S   +   G ++  +    Y++         LL    + G +D+ E +  ++  + D
Sbjct: 347 YACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPD 406

Query: 526 EVSWNSMISGYI-HNEL 541
           E +W S++S  + HN L
Sbjct: 407 EPTWASLLSACMRHNNL 423



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 210/457 (45%), Gaps = 43/457 (9%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           E+H  +I++G      + N L+++Y KCG I  +  +F  M  +D VSW ++++  ++  
Sbjct: 24  ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83

Query: 337 CYEEAIMNFCAM-RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
                +     M   DGL   +F     + +C+SLG++ LG+Q+H   +      D  V 
Sbjct: 84  IPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVK 143

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS------------------- 436
           ++L+ +Y   G       VF  +   + VSW S+I  +A S                   
Sbjct: 144 SSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLF 203

Query: 437 --EALVSEAVK---------YYLDMRRAGWS-PNGVTFINILAAASSFSMGKLGHQVHAQ 484
              AL+S  ++          + +MRR G    + +   +++   ++ ++ +LG Q+H  
Sbjct: 204 SWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGL 263

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
           VI     +   I NAL+  Y KC ++   + IF RM  R+D +SW S+I G   +    +
Sbjct: 264 VIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMP-RKDVISWTSIIVGTAQHGKAEE 322

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV-HACGVRACLEFDVVIGSALV 603
           A+ L   M+    + +  TF  +L AC+    + RG E+  +      +   +   + L+
Sbjct: 323 ALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLL 382

Query: 604 DMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           D+ S+ G +D A    D +P + +  +W S++S   RH + +  + +  ++ LD    D 
Sbjct: 383 DLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRV-LDLKPEDP 441

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
            T++ +LS       V  G + + S+S+V  L+  +E
Sbjct: 442 STYI-LLSN------VYAGAEMWGSVSKVRKLMSSME 471



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 208/474 (43%), Gaps = 68/474 (14%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H QI+K GF     L NTL++VY + G +  A +LFDEMP+R+ VSWA I++ +    +
Sbjct: 25  LHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALI 84

Query: 67  SNEACKMFKEM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
                 M   M    G   + +    ++RAC   G    + G QVH   + S    D +V
Sbjct: 85  PRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLG--YLRLGKQVHARFMLSXFCDDEVV 142

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS------------------- 166
            + LI MY  C +  D AR +F+ I  ++ +SW S+IS Y+                   
Sbjct: 143 KSSLIDMYTKCGQ-PDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRN 201

Query: 167 ------------QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL 214
                       Q G  I  F LF+ M+REG       +     S++    +  L+   L
Sbjct: 202 LFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIV---DPLVLSSVVGGCAN--LALLEL 256

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK 274
            +QI  +V   G  S L++ +ALV  +A+  +   A+ IF +M +K+V+S   ++ G  +
Sbjct: 257 GKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQ 316

Query: 275 GKEVHGYLIRSGLFDMVAVGN---------GLVNMYAKCGTIDDSRSVFRFMIGKDSVS- 324
             +    L    L+D + +           GL+   +  G +   R +FR M    S++ 
Sbjct: 317 HGKAEEALT---LYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINP 373

Query: 325 ----WNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
               +  ++  L ++G  +EA  +++    + D       +  S LS+C     + +G +
Sbjct: 374 SLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPD-----EPTWASLLSACMRHNNLEMGVR 428

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADA---GYLSRCLKVFFLMPEHDQVSWNSV 429
           I    L L  + D S    L ++YA A   G +S+  K+   M    +  ++S+
Sbjct: 429 IADRVLDLKPE-DPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSI 481



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 39/231 (16%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H + +   F  D  + ++LI++Y + G    A  +FD +  +NSVSW  ++SGY   
Sbjct: 125 KQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARS 184

Query: 65  GMSNEAC-------------------------------KMFKEMVRAGF-LLNRYALGSV 92
           G   EA                                 +F EM R G  +++   L SV
Sbjct: 185 GRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSV 244

Query: 93  LRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIET 152
           +  C     +  + G Q+H LV+         +SN L+ MY  C +    A+ IF  +  
Sbjct: 245 VGGCANL--ALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDIL-AAKDIFYRMPR 301

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           +D+ISW SII   +Q G       L+  M        +KPNE TF  L+ A
Sbjct: 302 KDVISWTSIIVGTAQHGKAEEALTLYDEM----VLSRIKPNEVTFVGLLYA 348



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 52/259 (20%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  ++  GF   +F+ N L+++Y +  D+ +A  +F  MP ++ +SW  I+ G    
Sbjct: 258 KQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQH 317

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G + EA  ++ EMV +    N      +L AC   G            LV +  + F  +
Sbjct: 318 GKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAG------------LVSRGRELFRSM 365

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
            ++  I                        L  +  ++ + S+ G       L  ++   
Sbjct: 366 TTDYSI---------------------NPSLQHYTCLLDLLSRSGHLDEAENLLDKI--- 401

Query: 185 GFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAG----LLSDLYVGSALV 238
                 KP+E T+ SL++A   ++++  G  +  ++L +  +      LLS++Y G+ + 
Sbjct: 402 ----PFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEM- 456

Query: 239 SGFARLGNFYYARKIFEQM 257
                 G+    RK+   M
Sbjct: 457 -----WGSVSKVRKLMSSM 470


>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 273/899 (30%), Positives = 457/899 (50%), Gaps = 74/899 (8%)

Query: 82  FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD 141
           F L+R+   + LR    C  +  K G+ +H  ++K     D  ++N L+++Y        
Sbjct: 9   FSLSRFQ-ETCLRVLSFCNSNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTF-GVH 66

Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
            AR +F+E+  RD++SW +I+S +++        +LF  M   G  Y   PNE+T  S +
Sbjct: 67  RARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSG-EY---PNEFTLSSAL 122

Query: 202 TAAYS---------------------SVLSGSYLLQ-------------QILAMVKKAGL 227
            + ++                     +   G+ L++             ++L++VK  G 
Sbjct: 123 RSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGG- 181

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV-------VSMNGLME---GRRKGKE 277
             D+   + ++S     G +  A +I+ +MI+  V       V + G +    G   GK 
Sbjct: 182 --DVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKL 239

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +H +LI  G    + +   +V+MY+KC  + D+  V       D   W T+ISG  QN  
Sbjct: 240 LHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQ 299

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
             EAI  F  M   GL+ +NF+  S L++ +S+  + LG+Q H   + +GL+ D+ + NA
Sbjct: 300 VREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNA 359

Query: 398 LLSLYADAGYLS-RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           L+ +Y    +++   +KVF  +   + + W S+I  FA  E  + ++ + + +M+ AG  
Sbjct: 360 LVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFA--EKRLEDSFQLFAEMQAAGVR 417

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           PN  T   IL A S          +H  +IK  V  +  + NAL+  Y   G +D+   +
Sbjct: 418 PNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSV 477

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
              M+  RD +++  + +          A+ ++  M   G ++D F+ A+ LSA A + T
Sbjct: 478 IGTMN-LRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGT 536

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG 636
           +E G ++H   V++  +    + ++LV +YSKCG I  A+R F  +   + +SWN +ISG
Sbjct: 537 METGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISG 596

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           ++ +G    AL+ F  M+L G  PD +T + ++SACSH GL++ G ++F SM + Y + P
Sbjct: 597 FSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITP 656

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAAN 756
           +L+ + C+VDLLGR G L++    I KM   P+SLI +T+L AC         LG   A 
Sbjct: 657 KLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHG--NVALGEDMAR 714

Query: 757 MLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV 816
              E++P +   Y+LLAN+Y + G  +   K R+ M+E  +++  G  W+ ++  VH F 
Sbjct: 715 RCLELDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWMEIRSRVHHFS 774

Query: 817 AGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF- 875
           AG++ +  +D I EKL+ L  + R+  Y  Q        E E K     YH E++AVAF 
Sbjct: 775 AGEKIN--EDEITEKLEFLITEFRNRRYQYQ--------ENEDK----FYHPEQLAVAFG 820

Query: 876 VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           VL   S  PIRI KN  +C  CH+     ++++GREI++RD  RFH F DG+CSC D +
Sbjct: 821 VLNAPSTSPIRIYKNSLICSHCHTFIMLSTQVIGREIIMRDRKRFHFFKDGQCSCRDIF 879



 Score =  235 bits (600), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 177/657 (26%), Positives = 312/657 (47%), Gaps = 53/657 (8%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K+    H  I+K G  +D++L N L+++Y +   +  A  LFDEMP+R+ VSW  I+S +
Sbjct: 31  KEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSSH 90

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           T     ++A ++F  M+ +G   N + L S LR+C   G   F+ GMQ+HC  +K     
Sbjct: 91  TKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGE--FERGMQIHCSAVKLGLEM 148

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEI-ETRDLISWNSIISVYSQRGDTISVFKLFSR 180
           +  V   L+  Y  C   +  A ++   + +  D++SW +++S   + G     F+++ +
Sbjct: 149 NRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYVK 208

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY--LLQQILAM----------------- 221
           M   G    + PNE+TF  L+  A SS L  SY  LL   L M                 
Sbjct: 209 MIESG----VYPNEFTFVKLL-GAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMY 263

Query: 222 ---------VKKAGLLS--DLYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMN 266
                    +K + L    D+Y+ + L+SGF +      A  +F  M    +  N  + +
Sbjct: 264 SKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYS 323

Query: 267 GLMEGRRK------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI-DDSRSVFRFMIG 319
            L+           G++ H  +I  GL D + +GN LV+MY KC  I  ++  VFR +  
Sbjct: 324 SLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITS 383

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
            + + W ++I+G  +    E++   F  M+  G+  ++F++ + L +C+    ++    +
Sbjct: 384 PNVMCWTSLIAGFAEKR-LEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMML 442

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           HG  +K  +D D++V+NAL+  YA  G +     V   M   D +++ + + A  + +  
Sbjct: 443 HGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITY-TCLAARLNQKGH 501

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
              A+K  + M   G   +  +  + L+AA+     + G Q+H   +K       ++ N+
Sbjct: 502 HGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNS 561

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  Y KCG + D  + F  +SE  D  SWN +ISG+  N L+  A++    M   G + 
Sbjct: 562 LVHLYSKCGSIHDANRAFKDISE-PDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKP 620

Query: 560 DHFTFATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           D  T  +++SAC+    LE G+E  H+      +   +     LVD+  + GR++ A
Sbjct: 621 DSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEEA 677



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 113/253 (44%), Gaps = 10/253 (3%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
           + H  I+K     D+ + N L++ Y  VG +  A  +   M  R+S+++ C+ +    KG
Sbjct: 441 MLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKG 500

Query: 66  MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
               A K+   M   G  ++ ++L S L A    G    + G Q+HC  +KS       V
Sbjct: 501 HHGMALKVLIHMCNDGIKMDEFSLASFLSAA--AGLGTMETGKQLHCYSVKSGFQRCHSV 558

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           SN L+ +Y  C    D A R F++I   D  SWN +IS +S  G        F  M+  G
Sbjct: 559 SNSLVHLYSKCGSIHD-ANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAG 617

Query: 186 FRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
               +KP+  T  SLI+A ++  +L     L+   +M K+  +   L     LV    R 
Sbjct: 618 ----VKPDSITLLSLISACSHGGLLELG--LEYFHSMQKEYHITPKLDHYMCLVDLLGRG 671

Query: 245 GNFYYARKIFEQM 257
           G    A  + E+M
Sbjct: 672 GRLEEAMGVIEKM 684


>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
          Length = 665

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 241/647 (37%), Positives = 348/647 (53%), Gaps = 46/647 (7%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMIG-----KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           L+  YA C  +  + +V             +V +N +I  L  +  + +A++ F +MR  
Sbjct: 56  LIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPR 115

Query: 352 G--LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
           G      +++    L SC++   ++LG QIH    KL LD +V V+++ +S+Y+  G   
Sbjct: 116 GPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPE 175

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD-MRRAGWSPNGVTFINILAA 468
              +VF  MP  D VSWN++I  FA    L   A++ +   +   G  P+  T   IL A
Sbjct: 176 DAYRVFDGMPHRDVVSWNAMIAGFA-RVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPA 234

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
                MG                              K  ++    ++F  M + ++ +S
Sbjct: 235 -----MGN----------------------------AKPDDIRFVRRVFDNM-QFKELIS 260

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           WN+M++ Y +NE   KA+ L   M +     D  T ATVL  C  ++    G  +H    
Sbjct: 261 WNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIK 320

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
           R  +  ++++ +AL+DMY+ CG +  A   FDLM  R+V SW S+IS Y +HGHG +A+ 
Sbjct: 321 RKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVD 380

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           LF +M   G  PD + FV VL+ACSHAGL+ +G  +F SM+  Y +IP+ E ++CMVDLL
Sbjct: 381 LFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLL 440

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
           GRAG +++  +FI  M I PN  +W  +L A CR +    ++G  AA+ LF + P+    
Sbjct: 441 GRAGCINEAYDFITTMLIEPNERVWGALLQA-CRIH-SNMDIGLVAADNLFSLVPEQTGY 498

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
           YVLL+NMYA  G+W DV   R  M    +KK  G S V + D VH F  GD  HP+ ++I
Sbjct: 499 YVLLSNMYARAGRWADVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMI 558

Query: 829 YEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRI 887
           Y KL EL  K+R  GY P+ +  L D+E E KED +S HSEK+A+AF+L   S    IR+
Sbjct: 559 YHKLDELLGKIRGMGYNPEVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRV 618

Query: 888 MKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             NLR C DCH A K IS I  REIVL+D+NR HH   G CSCGDYW
Sbjct: 619 TMNLRTCSDCHLAAKLISIITCREIVLKDTNRIHHIVQGVCSCGDYW 665



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 176/414 (42%), Gaps = 50/414 (12%)

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL 215
           + +N +I   +          LF+ M+  G   +  P+ YT+     A  S   S   LL
Sbjct: 87  VCFNVLIRALTASSLHRDALVLFASMRPRG--PACFPDHYTYP---LALKSCSASKDLLL 141

Query: 216 Q-QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK 274
             QI + V K  L  ++YV  + +S ++R G    A ++F+ M  ++VVS N ++ G   
Sbjct: 142 GLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAG--- 198

Query: 275 GKEVHGYLIRSGLFD-------------------------MVAVGNGLVNMYAKCGTIDD 309
                    R GLFD                         + A+GN      AK   I  
Sbjct: 199 -------FARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGN------AKPDDIRF 245

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
            R VF  M  K+ +SWN M++    N  + +A+  F  M +D +   + +L + L  C  
Sbjct: 246 VRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGE 305

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           L    +G++IH    +  +  ++ + NAL+ +YA  G L    ++F LM   D +SW S+
Sbjct: 306 LSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSI 365

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKY 488
           I A+        EAV  +  M   G  P+ + F+ +LAA S   +   G H   +   +Y
Sbjct: 366 ISAYG-KHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRY 424

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
           ++  +      ++   G+ G +++       M    +E  W +++    IH+ +
Sbjct: 425 HIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERVWGALLQACRIHSNM 478



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 34/376 (9%)

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA---LLSCYGKCG 508
           R+    +G + + +LAA  + +        HA+++     +  +  +A   L+  Y  C 
Sbjct: 5   RSHLPTSGESLLRLLAACRAPAHLPSLRAAHARLLVLLHPSHPSAAHANVKLIQAYAACS 64

Query: 509 EMDDCEKIFARMSE----RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL--DHF 562
            +     +    S     R   V +N +I     + L   A+ L   M  RG     DH+
Sbjct: 65  ALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHY 124

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           T+   L +C++   L  G+++H+   +  L+ +V +  + + MYS+CGR + A R FD M
Sbjct: 125 TYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGM 184

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQ-MKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           P R+V SWN+MI+G+AR G  D+A+ +F Q + L G +PD  T  G+L A  +A   D  
Sbjct: 185 PHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDIR 244

Query: 682 F--KHFKSMSQVYGLIPQLEQFSCMVDLLGRAG-ELDKIEEF--INKMPITPNSLIWRTV 736
           F  + F +M        +L  ++ M+ +       +  +E F  + K  + P+S+   TV
Sbjct: 245 FVRRVFDNMQ-----FKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATV 299

Query: 737 LGACCRANC----RKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAM 792
           L  C   +     ++     K  NM   +  +NA     L +MYAS G  +D  +    M
Sbjct: 300 LPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENA-----LMDMYASCGCLKDAREIFDLM 354

Query: 793 KEAEVKKEAGCSWVTM 808
              +V      SW ++
Sbjct: 355 SARDV-----ISWTSI 365



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/373 (23%), Positives = 165/373 (44%), Gaps = 33/373 (8%)

Query: 26  LINVYVRVGDLASASKLFDEM-PD-RNSVSWAC---IVSGYTHKGMSNEACKMFKEMVRA 80
           LI  Y     L  A  + +   PD R+  +  C   ++   T   +  +A  +F  M   
Sbjct: 56  LIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPR 115

Query: 81  GF--LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
           G     + Y     L++C          G+Q+H  V K     +  V++  I+MY  C  
Sbjct: 116 GPACFPDHYTYPLALKSCS--ASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGR 173

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRG---DTISVFKLFSRMQREGFRYSLKPNEY 195
             D A R+F+ +  RD++SWN++I+ +++ G     I VFK F  +Q         P+  
Sbjct: 174 PED-AYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGS------MPDAG 226

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF- 254
           T   ++ A  ++       ++++   ++   L+S     +A+++ +A       A ++F 
Sbjct: 227 TMAGILPAMGNAKPDDIRFVRRVFDNMQFKELIS----WNAMLAVYANNEFHVKAVELFM 282

Query: 255 ---------EQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
                    + +    V+   G +     GK +H  + R  +   + + N L++MYA CG
Sbjct: 283 LMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCG 342

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            + D+R +F  M  +D +SW ++IS   ++G   EA+  F  M   GL   + + ++ L+
Sbjct: 343 CLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLA 402

Query: 366 SCASLGWIMLGQQ 378
           +C+  G +  G+ 
Sbjct: 403 ACSHAGLLADGKH 415



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 165/359 (45%), Gaps = 63/359 (17%)

Query: 1   SKDAKL---FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACI 57
           SKD  L    H  + K     +V++ ++ I++Y R G    A ++FD MP R+ VSW  +
Sbjct: 136 SKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAM 195

Query: 58  VSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
           ++G+   G+ + A ++FK+ V                                   VL+ 
Sbjct: 196 IAGFARVGLFDRAIEVFKQFV-----------------------------------VLQG 220

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
           +    G ++ +L AM  +  +     RR+F+ ++ ++LISWN++++VY+     +   +L
Sbjct: 221 SMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVEL 280

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F  M+++     ++P+  T  +++       LS   + ++I  ++K+  +  +L + +AL
Sbjct: 281 FMLMEKD----EVEPDSITLATVLPPC--GELSAFSVGKRIHEIIKRKNMCPNLLLENAL 334

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGL 297
           +  +A  G    AR+IF+ M  ++V+S   ++     GK  HG      LF+ + +G GL
Sbjct: 335 MDMYASCGCLKDAREIFDLMSARDVISWTSIISA--YGKHGHGREA-VDLFEKM-LGQGL 390

Query: 298 -------VNMYAKC---GTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEA 341
                  V + A C   G + D +  F     R+ I   +  +  M+  L + GC  EA
Sbjct: 391 EPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEA 449


>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 238/668 (35%), Positives = 380/668 (56%), Gaps = 19/668 (2%)

Query: 272 RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA--KCGTIDDSRSVFRFMIGKDSVSWNTMI 329
            R+  ++H   I++   +  +V + L+ +YA  +   +  + S+F ++     VSWN +I
Sbjct: 28  EREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLI 87

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
               +N    +AI  FC +  D  +  +F+L   L  CA LG +  G+QIHG  LK+G  
Sbjct: 88  KCYIENQRSNDAIALFCKLLCD-FVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFG 146

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
            D  V ++L+S+Y+  G +  C KVF  M + D VSWNS+I  +A     +  A++ + +
Sbjct: 147 VDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARC-GEIELALEMFEE 205

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           M      P   +F   +        GKL  +    V        +   NA+++ Y K G+
Sbjct: 206 M------PEKDSFSWTILIDGLSKSGKL--EAARDVFDRMPIRNSVSWNAMINGYMKAGD 257

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
            +  +++F +M ER   V+WNSMI+GY  N+   KA+ L   M++     ++ T    +S
Sbjct: 258 SNTAKELFDQMPER-SLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVS 316

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           A + + +L  G  VH+  V++  + D V+G+ L++MYSKCG +  A R F  +P + +  
Sbjct: 317 AASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGH 376

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           W S+I G   HG  ++ L LF +M   G  P  +TF+GVL+ACSHAG  ++  ++FK M+
Sbjct: 377 WTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMT 436

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL-GACCRANCRKT 748
             YG+ P +E + C++D+L RAG L++ ++ I +MPI  N +IW ++L G+    N R  
Sbjct: 437 YDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIR-- 494

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
            +G  AA  L ++ P     YV+L+NMYA+ G WE V + R+ MK+  +KK+ GCS +  
Sbjct: 495 -MGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEH 553

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES-KEDLVSYH 867
           +  +H F+ GD+SHP+ + IY KL E+ +K+  AG++P T   L  LE ++ KE  +  H
Sbjct: 554 QGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKEAELETH 613

Query: 868 SEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SE++A+AF +L      PIRI+KNLR+C DCH+  K +S I  REI++RD +RFHHF  G
Sbjct: 614 SERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRFHHFKSG 673

Query: 927 KCSCGDYW 934
            CSC D+W
Sbjct: 674 SCSCKDFW 681



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 227/477 (47%), Gaps = 51/477 (10%)

Query: 97  QECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC-LESTDCARRIFEEIETRDL 155
           Q CG    +   Q+H L +K+       VS+ L+A+Y    + +   A  +F+ I+   L
Sbjct: 23  QNCGTE--REANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTL 80

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSY 213
           +SWN +I  Y +   +     LF ++  +       P+ +T   ++   A   ++  G  
Sbjct: 81  VSWNLLIKCYIENQRSNDAIALFCKLLCD-----FVPDSFTLPCVLKGCARLGALQEG-- 133

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR 273
             +QI  +V K G   D +V S+LVS +++ G     RK+F++M  K+VVS N L++G  
Sbjct: 134 --KQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYA 191

Query: 274 KGKEVH---------------------GYLIRSG-------LFDMVAVG-----NGLVNM 300
           +  E+                        L +SG       +FD + +      N ++N 
Sbjct: 192 RCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMING 251

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           Y K G  + ++ +F  M  +  V+WN+MI+G ++N  + +A+  F  M R+ +  +  ++
Sbjct: 252 YMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTI 311

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           +  +S+ + +  +  G+ +H   +K G  +D  +   L+ +Y+  G +   L+VF  +P+
Sbjct: 312 LGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPK 371

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
                W SVI        LV + ++ + +M R G  P+ +TFI +L A S     +  H+
Sbjct: 372 KKLGHWTSVIVGLG-MHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHR 430

Query: 481 VHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
            + +++ Y+   + +IE+   L+    + G +++ +    RM  + ++V W S++SG
Sbjct: 431 -YFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSG 486



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 206/432 (47%), Gaps = 41/432 (9%)

Query: 32  RVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGS 91
           R+ +L  A  LFD + +   VSW  ++  Y     SN+A  +F +++   F+ + + L  
Sbjct: 61  RINNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLL-CDFVPDSFTLPC 119

Query: 92  VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE 151
           VL+ C   G    + G Q+H LVLK     D  V + L++MY  C E   C R++F+ +E
Sbjct: 120 VLKGCARLG--ALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELC-RKVFDRME 176

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRM-QREGFRYSLKPNEYTFGSLITAA------ 204
            +D++SWNS+I  Y++ G+     ++F  M +++ F +++  +  +    + AA      
Sbjct: 177 DKDVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDR 236

Query: 205 --------YSSVLSG------SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
                   ++++++G      S   +++   + +  L++     +++++G+ R   F  A
Sbjct: 237 MPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVT----WNSMITGYERNKQFTKA 292

Query: 251 RKIFEQMIQKNV----------VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
            K+FE M+++++          VS    M     G+ VH Y+++SG      +G  L+ M
Sbjct: 293 LKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEM 352

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           Y+KCG++  +  VFR +  K    W ++I GL  +G  E+ +  F  M R GL     + 
Sbjct: 353 YSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITF 412

Query: 361 ISTLSSCASLGWIMLGQQ-IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           I  L++C+  G+     +         G+   +     L+ +   AG+L         MP
Sbjct: 413 IGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMP 472

Query: 420 -EHDQVSWNSVI 430
            + ++V W S++
Sbjct: 473 IKANKVIWTSLL 484



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 133/298 (44%), Gaps = 18/298 (6%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N +IN Y++ GD  +A +LFD+MP+R+ V+W  +++GY       +A K+F+ M+R    
Sbjct: 246 NAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDIS 305

Query: 84  LNRYA-LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC 142
            N    LG+V  A    G      G  VH  ++KS    DG++  +LI MY  C  S   
Sbjct: 306 PNYTTILGAVSAA---SGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKC-GSVKS 361

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF-GSLI 201
           A R+F  I  + L  W S+I      G      +LF  M R G    LKP+  TF G L 
Sbjct: 362 ALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTG----LKPHAITFIGVLN 417

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQK 260
             +++     ++  +    M    G+   +     L+    R G+   A+   E+M I+ 
Sbjct: 418 ACSHAGFAEDAH--RYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKA 475

Query: 261 NVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSV 313
           N V    L+ G RK   +  G      L D+     G    L NMYA  G  +  R V
Sbjct: 476 NKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQV 533



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 193/435 (44%), Gaps = 54/435 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ K  H  +LK GF  D F+ ++L+++Y + G++    K+FD M D++ VSW  ++ GY
Sbjct: 131 QEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGY 190

Query: 62  THKGMSNEACKMFKEMVRAG-----FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLK 116
              G    A +MF+EM          L++  +    L A ++               V  
Sbjct: 191 ARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARD---------------VFD 235

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
                + +  N +I  Y    +S + A+ +F+++  R L++WNS+I+ Y +        K
Sbjct: 236 RMPIRNSVSWNAMINGYMKAGDS-NTAKELFDQMPERSLVTWNSMITGYERNKQFTKALK 294

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
           LF  M RE     + PN  T    ++AA   V  G+   + + + + K+G  +D  +G+ 
Sbjct: 295 LFEVMLRE----DISPNYTTILGAVSAASGMVSLGTG--RWVHSYIVKSGFKTDGVLGTL 348

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNV---------VSMNGLMEGRRKGKEVHGYLIRSGL 287
           L+  +++ G+   A ++F  + +K +         + M+GL+E   +  E+   + R+GL
Sbjct: 349 LIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVE---QTLELFDEMCRTGL 405

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEAI 342
                   G++N  +  G  +D+   F+ M     I      +  +I  L + G  EEA 
Sbjct: 406 KPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAK 465

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD---VSVSNALL 399
                + R  + ++     S LS     G I +G+      + L  D+    V +SN   
Sbjct: 466 D---TIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSN--- 519

Query: 400 SLYADAGYLSRCLKV 414
            +YA AG   +  +V
Sbjct: 520 -MYAAAGLWEKVRQV 533


>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 225/574 (39%), Positives = 328/574 (57%), Gaps = 34/574 (5%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L SC+++  +   +Q H + ++LGL              AD   + R +K F  + +   
Sbjct: 27  LDSCSTMAEL---KQYHSQIIRLGLS-------------ADNDAMGRVIK-FCAISKSGY 69

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           + W            L    +  Y  M     SPN  T+  ++ A       + G Q+HA
Sbjct: 70  LRWQ-----------LARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHA 118

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER-RDEVSWNSMISGYIHNELL 542
            V+K+    +    N L+  Y     ++   ++F  M +R R+ VSWN+MI+ Y+ +  L
Sbjct: 119 HVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRL 178

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
            +A  L   M      LD F  A++LSAC  +  LE+G  +H    ++ +E D  + + +
Sbjct: 179 HEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTV 238

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           +DMY KCG ++ AS  F+ +P + + SWN MI G A HG G+ A+ LF +M+ +   PD 
Sbjct: 239 IDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDG 298

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFIN 722
           +TFV VLSAC+H+GLV+EG  +F+ M++V GL P +E F CMVDLLGRAG L++  + IN
Sbjct: 299 ITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLIN 358

Query: 723 KMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
           +MP+ P++ +   ++GAC    N   TELG +    + E+EP N+  YVLLAN+YAS G+
Sbjct: 359 EMPVNPDAGVLGALVGACRIHGN---TELGEQIGKKVIELEPHNSGRYVLLANLYASAGR 415

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           WEDVAK RK M +  VKK  G S +  + GV  F+AG  +HP+   IY KL E+ + +R 
Sbjct: 416 WEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRS 475

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSA 900
            GYVP T   L D++ E KE+ + YHSEK+A+AF +L       +RI KNLR+C DCH A
Sbjct: 476 IGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQA 535

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            K ISK+  REI++RD NRFHHF  G CSC DYW
Sbjct: 536 SKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 146/326 (44%), Gaps = 20/326 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVS 59
           ++ K  H  +LK GF  D F  N LI++YV    L  A ++FD MP  DRNSVSW  +++
Sbjct: 111 EEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIA 170

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
            Y      +EA  +F  M     +L+++   S+L AC   G    + G  +H  + KS  
Sbjct: 171 AYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACT--GLGALEQGKWIHGYIEKSGI 228

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D  ++  +I MY  C    + A  +F E+  + + SWN +I   +  G   +  +LF 
Sbjct: 229 ELDSKLATTVIDMYCKC-GCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFK 287

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
            M+RE     + P+  TF ++++A   S  V  G +  Q    M +  GL   +     +
Sbjct: 288 EMERE----MVAPDGITFVNVLSACAHSGLVEEGKHYFQY---MTEVLGLKPGMEHFGCM 340

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGN 295
           V    R G    ARK+  +M       + G + G  R  G    G  I   + ++    +
Sbjct: 341 VDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNS 400

Query: 296 G----LVNMYAKCGTIDDSRSVFRFM 317
           G    L N+YA  G  +D   V + M
Sbjct: 401 GRYVLLANLYASAGRWEDVAKVRKLM 426



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 127/257 (49%), Gaps = 8/257 (3%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD--SVSWNTMISG 331
           +GK++H ++++ G        N L++MY    +++ +R VF  M  +D  SVSWN MI+ 
Sbjct: 112 EGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAA 171

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
             Q+    EA   F  MR + ++   F   S LS+C  LG +  G+ IHG   K G++ D
Sbjct: 172 YVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELD 231

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
             ++  ++ +Y   G L +  +VF  +P+    SWN +IG  A        A++ + +M 
Sbjct: 232 SKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLA-MHGKGEAAIELFKEME 290

Query: 452 RAGWSPNGVTFINILAAASSFSM---GKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
           R   +P+G+TF+N+L+A +   +   GK   Q   +V+      E      ++   G+ G
Sbjct: 291 REMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHF--GCMVDLLGRAG 348

Query: 509 EMDDCEKIFARMSERRD 525
            +++  K+   M    D
Sbjct: 349 LLEEARKLINEMPVNPD 365



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 127/290 (43%), Gaps = 13/290 (4%)

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           I  +  M    +  + F+    + +C     I  G+QIH   LK G  +D    N L+ +
Sbjct: 79  IFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHM 138

Query: 402 YADAGYLSRCLKVFFLMPEHDQ--VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
           Y +   L +  +VF  MP+ D+  VSWN++I A+  S  L  EA   +  MR      + 
Sbjct: 139 YVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRL-HEAFALFDRMRLENVVLDK 197

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
               ++L+A +     + G  +H  + K  +  ++ +   ++  Y KCG ++   ++F  
Sbjct: 198 FVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNE 257

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           + ++    SWN MI G   +     A+ L   M +     D  TF  VLSACA    +E 
Sbjct: 258 LPQKGIS-SWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEE 316

Query: 580 GME-----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
           G           G++  +E        +VD+  + G ++ A +  + MPV
Sbjct: 317 GKHYFQYMTEVLGLKPGMEH----FGCMVDLLGRAGLLEEARKLINEMPV 362



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 170/379 (44%), Gaps = 38/379 (10%)

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
           SGY    ++     M+  M+      N++    ++RAC  C     + G Q+H  VLK  
Sbjct: 67  SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRAC--CIDYAIEEGKQIHAHVLKFG 124

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDL--ISWNSIISVYSQRGDTISVFK 176
              DG   N LI MY +  +S + ARR+F+ +  RD   +SWN++I+ Y Q       F 
Sbjct: 125 FGADGFSLNNLIHMYVN-FQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFA 183

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYV 233
           LF RM+ E                + A+  S  +G   L+Q   I   ++K+G+  D  +
Sbjct: 184 LFDRMRLENV---------VLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKL 234

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-RRKGK-EVHGYLIRSGLFDMV 291
            + ++  + + G    A ++F ++ QK + S N ++ G    GK E    L +    +MV
Sbjct: 235 ATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMV 294

Query: 292 AV-GNGLVNMYAKC---GTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA- 341
           A  G   VN+ + C   G +++ +  F++M     +      +  M+  L + G  EEA 
Sbjct: 295 APDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEAR 354

Query: 342 -IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
            ++N   +  D  +     L + + +C   G   LG+QI  + ++  L+   S    LL+
Sbjct: 355 KLINEMPVNPDAGV-----LGALVGACRIHGNTELGEQIGKKVIE--LEPHNSGRYVLLA 407

Query: 401 -LYADAGYLSRCLKVFFLM 418
            LYA AG      KV  LM
Sbjct: 408 NLYASAGRWEDVAKVRKLM 426



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 54/289 (18%)

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAY--SSVLSGSYLLQQILAMVKKAGLLSDLYVG 234
           ++SRM       S+ PN++T+  LI A     ++  G    +QI A V K G  +D +  
Sbjct: 81  MYSRM----LHKSVSPNKFTYPPLIRACCIDYAIEEG----KQIHAHVLKFGFGADGFSL 132

Query: 235 SALVSGFARLGNFYYARKIFEQMIQK--NVVSMNGLMEGR-------------------- 272
           + L+  +    +   AR++F+ M Q+  N VS N ++                       
Sbjct: 133 NNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLEN 192

Query: 273 ---------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
                                 +GK +HGY+ +SG+     +   +++MY KCG ++ + 
Sbjct: 193 VVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKAS 252

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
            VF  +  K   SWN MI GL  +G  E AI  F  M R+ +     + ++ LS+CA  G
Sbjct: 253 EVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSG 312

Query: 372 WIMLGQQIHGEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
            +  G+       + LGL   +     ++ L   AG L    K+   MP
Sbjct: 313 LVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMP 361


>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/565 (40%), Positives = 334/565 (59%), Gaps = 14/565 (2%)

Query: 377 QQIHGEGLKLGL-----DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
           +QIH   ++ G+     D +  +  AL+SL A   + +   ++F  +   +  +WN++I 
Sbjct: 52  KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAA---QIFNQIQAPNIFTWNTMIR 108

Query: 432 AFADSEALVSEAVKYYLDMRRAG-WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
            FA+SE   S AV+ +  M  A    P+  TF  +  A +      LG  +H+ V++   
Sbjct: 109 GFAESEN-PSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGF 167

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
            +   ++N+L+  Y   G +    ++F  MS  RD V+WNS+I+G+  N +  +A+ L  
Sbjct: 168 DSLRFVQNSLVHMYSVLGSLXSAYQVFEIMS-YRDRVAWNSVINGFALNGMPNEALTLYR 226

Query: 551 FMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCG 610
            M   G   D FT  ++LSAC  +  L  G  VH   V+  L  +    +AL+D+YSKCG
Sbjct: 227 EMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCG 286

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
               A + FD M  R+V SW S+I G A +G G++AL LF +++  G  P  +TFVGVL 
Sbjct: 287 NFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLY 346

Query: 671 ACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNS 730
           ACSH G++DEGF +F+ M + YG++P++E   CMVDLL RAG++    ++I  MP+ PN+
Sbjct: 347 ACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNA 406

Query: 731 LIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARK 790
           +IWRT+LGAC        ELG  A   +  +E +++ ++VLL+N+YAS  +W DV   RK
Sbjct: 407 VIWRTLLGACTIHG--HLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRK 464

Query: 791 AMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKF 850
            M    VKK  G S V +K+ V+ F+ GD SHP+ +  Y  L ++ Q ++  GYVP+T  
Sbjct: 465 IMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVN 524

Query: 851 ALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVG 909
            L D+E E KE  +S+H+EK+A+AF+L       PIRIMKNLRVC DCH A K ISK+  
Sbjct: 525 VLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFE 584

Query: 910 REIVLRDSNRFHHFNDGKCSCGDYW 934
           REI++RD +RFHHF DG CSC DYW
Sbjct: 585 REIIVRDRSRFHHFKDGSCSCKDYW 609



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 172/368 (46%), Gaps = 18/368 (4%)

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
           R+ + P    F   +  A  S+ +      QI   ++      +++  + ++ GFA   N
Sbjct: 60  RHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAP----NIFTWNTMIRGFAESEN 115

Query: 247 FYYARKIFEQM-----IQKNVVSMNGLMEGRRK------GKEVHGYLIRSGLFDMVAVGN 295
              A ++F QM     I  +  +   L +   K      G+ +H  ++R+G   +  V N
Sbjct: 116 PSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQN 175

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMS 355
            LV+MY+  G++  +  VF  M  +D V+WN++I+G   NG   EA+  +  M  +G+  
Sbjct: 176 SLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEP 235

Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
             F+++S LS+C  LG + LG+++H   +K+GL  +   SNALL LY+  G      KVF
Sbjct: 236 DGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVF 295

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
             M E   VSW S+I   A    L +EA+K + ++ R G  P+ +TF+ +L A S   M 
Sbjct: 296 DEMEERSVVSWTSLIVGLA-VNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGML 354

Query: 476 KLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
             G     ++  +Y +         ++    + G++ D       M    + V W +++ 
Sbjct: 355 DEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLG 414

Query: 535 G-YIHNEL 541
              IH  L
Sbjct: 415 ACTIHGHL 422



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 110/196 (56%), Gaps = 7/196 (3%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++++GF    F+ N+L+++Y  +G L SA ++F+ M  R+ V+W  +++G+   GM 
Sbjct: 159 HSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMP 218

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           NEA  +++EM   G   + + + S+L AC E G      G +VH  ++K     +   SN
Sbjct: 219 NEALTLYREMGSEGVEPDGFTMVSLLSACVELG--ALALGERVHMYMVKVGLVQNQHASN 276

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ +Y  C    D A+++F+E+E R ++SW S+I   +  G      KLF  ++R+G  
Sbjct: 277 ALLDLYSKCGNFRD-AQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQG-- 333

Query: 188 YSLKPNEYTFGSLITA 203
             LKP+E TF  ++ A
Sbjct: 334 --LKPSEITFVGVLYA 347



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 169/396 (42%), Gaps = 62/396 (15%)

Query: 89  LGSVLRAC----QECGPSGFKFGMQVHCLVLK-----SNQTFDGLVSNVLIAMYGSCLES 139
           L  +LR C    Q CG S  K   Q+H   ++      N  F+  +   L+++       
Sbjct: 30  LSFILRKCISLVQLCGSSQSKLK-QIHAFSIRHGVPPQNPDFNKHLIFALVSLSAP---- 84

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
              A +IF +I+  ++ +WN++I  +++  +     +LFS+M       S+ P+ +TF  
Sbjct: 85  MSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAAS---SILPDTHTFPF 141

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           L  A   + L    L + I ++V + G  S  +V ++LV  ++ LG+   A ++FE M  
Sbjct: 142 LFKAV--AKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSY 199

Query: 260 KNVVSMNGLMEG--------------RRKGKE---------------------------V 278
           ++ V+ N ++ G              R  G E                           V
Sbjct: 200 RDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERV 259

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H Y+++ GL       N L+++Y+KCG   D++ VF  M  +  VSW ++I GL  NG  
Sbjct: 260 HMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLG 319

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNA 397
            EA+  F  + R GL  S  + +  L +C+  G +  G         + G+   +     
Sbjct: 320 NEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGC 379

Query: 398 LLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           ++ L   AG +         MP   + V W +++GA
Sbjct: 380 MVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGA 415



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 2/101 (1%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H+ ++K G   +    N L+++Y + G+   A K+FDEM +R+ VSW  ++ G    G+ 
Sbjct: 260 HMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLG 319

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKF 106
           NEA K+F E+ R G   +      VL AC  CG    GF +
Sbjct: 320 NEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNY 360


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 241/700 (34%), Positives = 380/700 (54%), Gaps = 47/700 (6%)

Query: 189 SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
           S++    T+G+LI A  +S+ S  Y  ++I   + K+    DL + + +++ + + G+  
Sbjct: 152 SIQLESSTYGNLILAC-TSIRSLKYG-KKIHDHILKSNCQPDLVLQNHILNMYGKCGSLK 209

Query: 249 YARKIFEQMIQKNVVSMNGLMEGRRK---------------------------------- 274
            ARK F+ M  +NVVS   ++ G  +                                  
Sbjct: 210 DARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACC 269

Query: 275 -------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
                  G+++HG++I+SG    +   N L++MY + G I  +  VF  +  KD +SW +
Sbjct: 270 IAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWAS 329

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKL 386
           MI+G  Q G   EA+  F  M R G    N F   S  S+C SL     G+QIHG   K 
Sbjct: 330 MITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKF 389

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
           GL  +V    +L  +YA  G+L   ++ F+ +   D VSWN++I AF+DS   V+EA+ +
Sbjct: 390 GLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDS-GDVNEAIYF 448

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
           +  M   G  P+G+TF+++L A  S      G Q+H+ +IK  +  E  + N+LL+ Y K
Sbjct: 449 FCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTK 508

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
           C  + D   +F  +SE  + VSWN+++S  + ++   +   L   M+    + D+ T  T
Sbjct: 509 CSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITT 568

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           +L  CA +A+LE G +VH   V++ L  DV + + L+DMY+KCG + +A   F      +
Sbjct: 569 ILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPD 628

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
           + SW+S+I GYA+ G G +AL LF  MK  G  P+ VT++GVLSACSH GLV+EG+  + 
Sbjct: 629 IVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYN 688

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
           +M    G+ P  E  SCMVDLL RAG L + E FI KM   P+  +W+T+L +C      
Sbjct: 689 TMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASC--KTHG 746

Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
             ++  +AA  + +++P N+   VLL+N++AS G W++VA+ R  MK+  V+K  G SW+
Sbjct: 747 NVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQSWI 806

Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVP 846
            +KD +HVF + D SH ++  IY  L++L  +M D GY P
Sbjct: 807 AVKDQIHVFFSEDNSHQQRGDIYTMLEDLWLQMLDDGYDP 846



 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 174/579 (30%), Positives = 273/579 (47%), Gaps = 58/579 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  ILK     D+ L N ++N+Y + G L  A K FD M  RN VSW  ++SGY
Sbjct: 174 KYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGY 233

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G  N+A  M+ +M+++G+  +    GS+++AC  C       G Q+H  V+KS    
Sbjct: 234 SQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKAC--CIAGDIDLGRQLHGHVIKSGYDH 291

Query: 122 DGLVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
             +  N LI+MY   G  + ++D    +F  I T+DLISW S+I+ ++Q G  I    LF
Sbjct: 292 HLIAQNALISMYTRFGQIVHASD----VFTMISTKDLISWASMITGFTQLGYEIEALYLF 347

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
             M R+GF    +PNE+ FGS+ +A  S  L      +QI  M  K GL  +++ G +L 
Sbjct: 348 RDMFRQGF---YQPNEFIFGSVFSACRS--LLEPEFGRQIHGMCAKFGLGRNVFAGCSLC 402

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMN-------------------------GLMEGR- 272
             +A+ G    A + F Q+   ++VS N                         GLM    
Sbjct: 403 DMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGI 462

Query: 273 ---------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                           +G ++H Y+I+ GL    AV N L+ MY KC  + D+ +VF+ +
Sbjct: 463 TFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDV 522

Query: 318 I-GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
               + VSWN ++S   Q+    E    F  M        N ++ + L +CA L  + +G
Sbjct: 523 SENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVG 582

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
            Q+H   +K GL  DVSVSN L+ +YA  G L     VF      D VSW+S+I  +A  
Sbjct: 583 NQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQF 642

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETT 495
             L  EA+  +  M+  G  PN VT++ +L+A S   + + G H  +   I+  +     
Sbjct: 643 -GLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTRE 701

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
             + ++    + G + + E    +M    D   W ++++
Sbjct: 702 HVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLA 740



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 231/475 (48%), Gaps = 13/475 (2%)

Query: 307 IDDSRSVFRFMIGKDS--VSWNTMISGLDQNGCYEEAIMNFCAMRRDG---LMSSNFSLI 361
           +D+    F  +I + S  +S N+ I+ + +   Y EA+  F    ++    L SS +   
Sbjct: 104 LDEIPCQFVCLIKQHSRELSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYG-- 161

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           + + +C S+  +  G++IH   LK     D+ + N +L++Y   G L    K F  M   
Sbjct: 162 NLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLR 221

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           + VSW  +I  ++ +    ++A+  Y+ M ++G+ P+ +TF +I+ A        LG Q+
Sbjct: 222 NVVSWTIMISGYSQN-GQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQL 280

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H  VIK    +    +NAL+S Y + G++     +F  +S  +D +SW SMI+G+     
Sbjct: 281 HGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMIST-KDLISWASMITGFTQLGY 339

Query: 542 LPKAMNLVWFMMQRG-QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
             +A+ L   M ++G  + + F F +V SAC S+   E G ++H    +  L  +V  G 
Sbjct: 340 EIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGC 399

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           +L DMY+K G +  A R F  +   ++ SWN++I+ ++  G  ++A+  F QM   G +P
Sbjct: 400 SLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMP 459

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           D +TF+ +L AC     +++G +    + ++ GL  +    + ++ +  +   L      
Sbjct: 460 DGITFLSLLCACGSPVTINQGTQIHSYIIKI-GLDKEAAVCNSLLTMYTKCSNLHDAFNV 518

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF-EMEPQNAVNYVLLAN 774
              +    N + W  +L AC +   +  E+ R    MLF E +P N     +L  
Sbjct: 519 FKDVSENANLVSWNAILSACLQHK-QAGEVFRLFKLMLFSENKPDNITITTILGT 572


>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
 gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
          Length = 562

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 222/563 (39%), Positives = 329/563 (58%), Gaps = 8/563 (1%)

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G++IH      G        N L+S+YA  G L     +F  + E   VSW+++IGA+A 
Sbjct: 4   GRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYA- 62

Query: 436 SEALVSEAVKYYLDMRRAGW-SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN--VAN 492
                 EA+  +  MR  G   PN +TF  +  A       + G ++HA  +      ++
Sbjct: 63  LHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSS 122

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
              +ENALL+ Y +CG +++  K+F  M +  D  SW SMI+    N  L +A+ L   M
Sbjct: 123 NAILENALLNMYVRCGSLEEARKVFDTM-DHPDAFSWTSMITACTENCELLEALELFHRM 181

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRI 612
              G      T A+VL+ACA    L+ G ++H+    +     V+  +AL+DMY+KCG +
Sbjct: 182 NLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSL 241

Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
           + +S+ F  M  RN  SW +MI+  A+HG GD+AL LF +M L+G + D  TF+ VL AC
Sbjct: 242 ECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRAC 301

Query: 673 SHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI 732
           SHAGL+ E  + F SM + Y + P    +   +D +GRAG L   EE I+ MP  P +L 
Sbjct: 302 SHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLT 361

Query: 733 WRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAM 792
           W+T+L A CR +  + E   K A +L ++ P++++ Y LL N+YA+ G++ D  + RK M
Sbjct: 362 WKTLLNA-CRIH-SQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGM 419

Query: 793 KEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFAL 852
            +  +KK  G S++ +K+ VH FVAGD +HP +D I  +L++L  +MR+AGYVP TK  L
Sbjct: 420 TDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVL 479

Query: 853 FDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGRE 911
             +  E KE L+  HSEK+A+AF ++      P+ I+KNLRVC DCH+A K I+KI+ R 
Sbjct: 480 HAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRR 539

Query: 912 IVLRDSNRFHHFNDGKCSCGDYW 934
           IV+RD++RFHHF DG+CSC DYW
Sbjct: 540 IVVRDTHRFHHFEDGQCSCKDYW 562



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 179/383 (46%), Gaps = 17/383 (4%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +G+ +H  L   G        NGLV+MYAKCG +D++R++F  ++ +  VSW+ MI    
Sbjct: 3   EGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYA 62

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLG--LDS 390
            +G  +EA++ F  MR DG +  N  +     ++C  +  +  G++IH   +  G    S
Sbjct: 63  LHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSS 122

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM 450
           +  + NALL++Y   G L    KVF  M   D  SW S+I A  ++  L+ EA++ +  M
Sbjct: 123 NAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELL-EALELFHRM 181

Query: 451 RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM 510
              G  P  VT  ++L A +     K+G Q+H+++      +    + ALL  Y KCG +
Sbjct: 182 NLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSL 241

Query: 511 DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
           +   K+F  M E R+ VSW +MI+    +    +A+ L   M   G   D  TF  VL A
Sbjct: 242 ECSSKVFTAM-ETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRA 300

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSA------LVDMYSKCGRIDYASRFFDLMPV 624
           C+    ++  +E     V      D  I          +D   + GR+  A      MP 
Sbjct: 301 CSHAGLIKESLEFFHSMVE-----DYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPF 355

Query: 625 R-NVYSWNSMISGYARHGHGDKA 646
                +W ++++    H   ++A
Sbjct: 356 HPETLTWKTLLNACRIHSQAERA 378



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 161/331 (48%), Gaps = 17/331 (5%)

Query: 226 GLLSDLYVG-SALVSGFARLGNFYYARKIFEQM-----IQKNVVSMNGL------MEGRR 273
           G+L    V  SA++  +A  G    A  +F +M     ++ N ++  G+      +E   
Sbjct: 45  GILERTVVSWSAMIGAYALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLE 104

Query: 274 KGKEVHGYLIRSGLFDM--VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
           +G+E+H   + SG        + N L+NMY +CG+++++R VF  M   D+ SW +MI+ 
Sbjct: 105 QGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITA 164

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
             +N    EA+  F  M  +G+  ++ +L S L++CA  G + +G+QIH      G  S 
Sbjct: 165 CTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSS 224

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           V    ALL +YA  G L    KVF  M   + VSW ++I A A       EA++ + +M 
Sbjct: 225 VLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQ-HGQGDEALELFKEMN 283

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEM 510
             G   +  TFI +L A S   + K   +  H+ V  Y +A   T     L   G+ G +
Sbjct: 284 LEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRL 343

Query: 511 DDCEKIFARMSERRDEVSWNSMISG-YIHNE 540
            D E++   M    + ++W ++++   IH++
Sbjct: 344 QDAEELIHSMPFHPETLTWKTLLNACRIHSQ 374



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 155/354 (43%), Gaps = 51/354 (14%)

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +  N L++MY  C    D AR IF  I  R ++SW+++I  Y+  G       LF RM+ 
Sbjct: 21  IAQNGLVSMYAKC-GCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRMRN 79

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL--SDLYVGSALVSGF 241
           +G    ++PN  TF  +  A    V+      ++I A+   +G L  S+  + +AL++ +
Sbjct: 80  DG---RVEPNAMTFTGVFNAC--GVIEDLEQGREIHALAMASGELKSSNAILENALLNMY 134

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGL---------------------MEG--------- 271
            R G+   ARK+F+ M   +  S   +                     +EG         
Sbjct: 135 VRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLA 194

Query: 272 -----------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                       + GK++H  L  SG    V     L++MYAKCG+++ S  VF  M  +
Sbjct: 195 SVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETR 254

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-I 379
           +SVSW  MI+ L Q+G  +EA+  F  M  +G+++   + I  L +C+  G I    +  
Sbjct: 255 NSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFF 314

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ-VSWNSVIGA 432
           H       +    +     L     AG L    ++   MP H + ++W +++ A
Sbjct: 315 HSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNA 368



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 81/168 (48%), Gaps = 3/168 (1%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +  L N L+N+YVR G L  A K+FD M   ++ SW  +++  T      EA ++F  M 
Sbjct: 123 NAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMN 182

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             G       L SVL AC   G    K G Q+H  +  S      L    L+ MY  C  
Sbjct: 183 LEGIPPTSVTLASVLNACACSG--ALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKC-G 239

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           S +C+ ++F  +ETR+ +SW ++I+  +Q G      +LF  M  EG 
Sbjct: 240 SLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGM 287



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 27/209 (12%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H ++   GF   V     L+++Y + G L  +SK+F  M  RNSVSW  +++  
Sbjct: 207 KVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAAL 266

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G  +EA ++FKEM   G + +      VLRAC   G            L+ +S + F
Sbjct: 267 AQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAG------------LIKESLEFF 314

Query: 122 DGLVSNVLIA----MYGSCLESTDCARRIFEEIET-------RDLISWNSIIS---VYSQ 167
             +V +  IA     Y   L++   A R+ +  E         + ++W ++++   ++SQ
Sbjct: 315 HSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQ 374

Query: 168 RGDTISVFKLFSRMQRE-GFRYSLKPNEY 195
                 V +L S++  E    Y+L  N Y
Sbjct: 375 AERATKVAELLSKLAPEDSMAYTLLGNVY 403


>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
 gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/613 (36%), Positives = 357/613 (58%), Gaps = 17/613 (2%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMN-----------GLMEGRRKGKEVHGYLI 283
           + ++SG+    N   A  +F +M  +  + M+           GL      G+ +HGY +
Sbjct: 36  TTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSLALKACGLNMSVSFGESLHGYSV 95

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
           ++   + V VG+ LV+MY K G +D+   VF+ M  ++ VSW  +I+GL + G  +EA+ 
Sbjct: 96  KTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALA 155

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            F  M    +    ++  S L +CA  G +  G++IH + LK G  +   V+N L ++Y 
Sbjct: 156 YFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYN 215

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE-AVKYYLDMRRAGWSPNGVTF 462
             G L   L++F  M + D VSW ++I   ++ +    E AVK +  MR    SPN  TF
Sbjct: 216 KCGKLDYGLRLFESMTQRDVVSWTTII--MSNVQIGQEENAVKAFRRMRETDVSPNEFTF 273

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
             +++  ++    + G Q+HA VI+  + +  ++ N++++ Y KC ++D    +F  +S 
Sbjct: 274 AAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLS- 332

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
           RRD +SW++MISGY       +A + + +M + G R + F FA+VLS C ++A LE+G +
Sbjct: 333 RRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQ 392

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
           +HA  +   LE + ++ SAL++MYSKCG I  AS+ FD     N+ SW +MI+GYA HG+
Sbjct: 393 LHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGY 452

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
             +A+ LF ++   G  PD VTF+ VL+ACSHAGLVD GF +F S+S+V+ + P  + + 
Sbjct: 453 SQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYG 512

Query: 703 CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
           CM+DLL RAG L+  E  I  MP   + ++W T+L A CR +    + G++AA  + +++
Sbjct: 513 CMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRA-CRIH-GDVDCGKRAAEKILQLD 570

Query: 763 PQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESH 822
           P  AV ++ LANMYA+ GKW++ A+ RK MK   V KE G SW+  KD V  FV+GD SH
Sbjct: 571 PNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWSWIKFKDRVSAFVSGDRSH 630

Query: 823 PEKDLIYEKLKEL 835
           PE + IY+ L  L
Sbjct: 631 PEGEYIYDVLDLL 643



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 154/565 (27%), Positives = 274/565 (48%), Gaps = 60/565 (10%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEM-VRAGF 82
           N ++   V+ G L +A +LFD+M  R+ +SW  I+SGY +   + EA  +F +M V  G 
Sbjct: 5   NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64

Query: 83  LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC 142
            ++ + L   L+AC         FG  +H   +K++      V + L+ MY   +   D 
Sbjct: 65  HMDPFILSLALKACGL--NMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMK-IGKVDE 121

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM--QREGFRYSLKPNEYTFGSL 200
              +F+E+  R+++SW +II+   + G        FS M  Q+ G       + YTF S 
Sbjct: 122 GCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGC------DTYTFSSA 175

Query: 201 ITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           + A A S  L+     ++I     K G  +  +V + L + + + G   Y  ++FE M Q
Sbjct: 176 LKACADSGALNYG---REIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQ 232

Query: 260 KNVVS-----MNGLMEGRRK------------------------------------GKEV 278
           ++VVS     M+ +  G+ +                                    G+++
Sbjct: 233 RDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQL 292

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H ++IR GL D ++V N ++ MY+KC  +D + +VF+ +  +D +SW+TMISG  Q GC 
Sbjct: 293 HAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCG 352

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           EEA      MRR+G   + F+  S LS C ++  +  G+Q+H   L +GL+ +  V +AL
Sbjct: 353 EEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSAL 412

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           +++Y+  G +    K+F     ++ VSW ++I  +A+      EA+  +  + + G  P+
Sbjct: 413 INMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAE-HGYSQEAIDLFKKLPKVGLRPD 471

Query: 459 GVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
            VTFI +LAA S   +  LG H  ++    + +         ++    + G ++D E + 
Sbjct: 472 SVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMI 531

Query: 518 ARMSERRDEVSWNSMISG-YIHNEL 541
             M  +RD+V W++++    IH ++
Sbjct: 532 QSMPFQRDDVVWSTLLRACRIHGDV 556



 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 143/545 (26%), Positives = 247/545 (45%), Gaps = 53/545 (9%)

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR-RDGL 353
           N ++    K G ++++R +F  M+ +D +SW T+ISG        EA+  F  M    GL
Sbjct: 5   NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
               F L   L +C     +  G+ +HG  +K    + V V +AL+ +Y   G +     
Sbjct: 65  HMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           VF  MP  + VSW ++I     +     EA+ Y+ DM       +  TF + L A +   
Sbjct: 125 VFKEMPLRNVVSWTAIIAGLVRA-GYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSG 183

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
               G ++H Q +K      + + N L + Y KCG++D   ++F  M++ RD VSW ++I
Sbjct: 184 ALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQ-RDVVSWTTII 242

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
              +       A+     M +     + FTFA V+S CA++  +E G ++HA  +R  L 
Sbjct: 243 MSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLV 302

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
             + + ++++ MYSKC ++D AS  F  +  R++ SW++MISGYA+ G G++A    S M
Sbjct: 303 DSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWM 362

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGE 713
           + +GP P+   F  VLS C +  ++++G K   +     GL       S ++++  + G 
Sbjct: 363 RREGPRPNEFAFASVLSVCGNMAILEQG-KQLHAHVLCVGLEQNTMVQSALINMYSKCGS 421

Query: 714 LDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLA 773
           +                                     ++A+ +  E E  N V++  + 
Sbjct: 422 I-------------------------------------KEASKIFDEAEYNNIVSWTAMI 444

Query: 774 NMYASGGKWEDVAKARKAMKEAEVKKE--------AGCSWVTMKD-GVHVFVAGDESH-- 822
           N YA  G  ++     K + +  ++ +        A CS   + D G H F +  + H  
Sbjct: 445 NGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQI 504

Query: 823 -PEKD 826
            P KD
Sbjct: 505 CPSKD 509



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 219/469 (46%), Gaps = 52/469 (11%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K  F   VF+ + L+++Y+++G +     +F EMP RN VSW  I++G    G 
Sbjct: 90  LHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGY 149

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           + EA   F +M       + Y   S L+AC + G     +G ++HC  LK   T    V+
Sbjct: 150 NKEALAYFSDMWIQKVGCDTYTFSSALKACADSG--ALNYGREIHCQTLKKGFTAVSFVA 207

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L  MY  C    D   R+FE +  RD++SW +II    Q G   +  K F RM+    
Sbjct: 208 NTLATMYNKC-GKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRET-- 264

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              + PNE+TF ++I+    + L      +Q+ A V + GL+  L V +++++ +++   
Sbjct: 265 --DVSPNEFTFAAVISGC--ATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQ 320

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG-----------------RR---------------- 273
              A  +F+ + +++++S + ++ G                 RR                
Sbjct: 321 LDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSV 380

Query: 274 --------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                   +GK++H +++  GL     V + L+NMY+KCG+I ++  +F      + VSW
Sbjct: 381 CGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSW 440

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
             MI+G  ++G  +EAI  F  + + GL   + + I+ L++C+  G + LG        K
Sbjct: 441 TAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSK 500

Query: 386 L-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           +  +         ++ L   AG L+    +   MP + D V W++++ A
Sbjct: 501 VHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRA 549



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 147/326 (45%), Gaps = 20/326 (6%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +++ G    + + N+++ +Y +   L  AS +F  +  R+ +SW+ ++SGY   G 
Sbjct: 292 LHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGC 351

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA      M R G   N +A  SVL  C        + G Q+H  VL      + +V 
Sbjct: 352 GEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAI--LEQGKQLHAHVLCVGLEQNTMVQ 409

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + LI MY  C  S   A +IF+E E  +++SW ++I+ Y++ G +     LF ++ + G 
Sbjct: 410 SALINMYSKC-GSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGL 468

Query: 187 RYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
           R    P+  TF +++ A +++ ++   +     L+ V +     D Y    ++    R G
Sbjct: 469 R----PDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHY--GCMIDLLCRAG 522

Query: 246 NFYYARKIFEQM-IQKNVVSMNGLMEGRRK------GKEVHGYLIRSGLFDMVAVGN-GL 297
               A  + + M  Q++ V  + L+   R       GK     +++  L    AV +  L
Sbjct: 523 RLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQ--LDPNCAVTHITL 580

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSV 323
            NMYA  G   ++  V + M  K  V
Sbjct: 581 ANMYAAKGKWKEAAEVRKMMKSKGVV 606



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 51/99 (51%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  +L  G   +  + + LIN+Y + G +  ASK+FDE    N VSW  +++GY
Sbjct: 388 EQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGY 447

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G S EA  +FK++ + G   +     +VL AC   G
Sbjct: 448 AEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAG 486


>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
          Length = 841

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 260/827 (31%), Positives = 417/827 (50%), Gaps = 82/827 (9%)

Query: 74  FKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY 133
           + +M   G L N   L  VL+AC     +  + G  +H  +  ++   D  V   ++  Y
Sbjct: 48  YTQMESLGVLPNNTTLPLVLKAC--AAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFY 105

Query: 134 GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPN 193
             C    D AR +F+ +  RD++ WN+++  Y   G       L   M RE    +L+PN
Sbjct: 106 CKCGFVED-ARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRE----NLRPN 160

Query: 194 EYTFGSLITAA---------------------------YSSVLSGSYLL--QQILAMVKK 224
             T  +L+ A                             ++ L G YL    ++L ++  
Sbjct: 161 SRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFDMRVLPLLFD 220

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV--------VSMNGLME--GRRK 274
             ++ ++   +A++SG+  +G+++ A ++F QM+   V        V++    E    + 
Sbjct: 221 LMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKL 280

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK++H   I+    + + + N L+NMY+  G+++ S  +F  +  +D+  WN+MIS    
Sbjct: 281 GKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAA 340

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML-GQQIHGEGLKLGLDSDVS 393
            GC+EEA+  F  M+ +G+     +++  LS C  L   +L G+ +H   +K G+  D S
Sbjct: 341 FGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDAS 400

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           + NALLS+Y +   +    K+F  M   D +SWN++I A A    L ++A + +  MR +
Sbjct: 401 LGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALA-RNTLRAQACELFERMRES 459

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
              PN  T I+ILAA    +    G  +H  V+K+++     +  AL   Y  CG+    
Sbjct: 460 EIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATA 519

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
             +F    +R D +SWN+MI     N +                     T   VLS+   
Sbjct: 520 RDLFEGCPDR-DLISWNAMIXKAEPNSV---------------------TIINVLSSFTH 557

Query: 574 VATLERGMEVHACGVRA--CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           +ATL +G  +HA   R    L  D+ + +A + MY++CG +  A   F  +P RN+ SWN
Sbjct: 558 LATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWN 617

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           +MI+GY  +G G  A+  FSQM  DG  P+ VTFV VLSACSH+G ++ G + F SM Q 
Sbjct: 618 AMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQD 677

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
           + + P+L  +SC+VDLL R G +D+  EFI+ MPI P++ +WR +L +C      +    
Sbjct: 678 FNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSC------RAYSD 731

Query: 752 RKAANMLFE----MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
            K A  +FE    +EP NA NYVLL+N+YA+ G W +V + R  +KE  ++K  G SW+ 
Sbjct: 732 AKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWII 791

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFD 854
           +K+ VH F AGD SHP+ D IY KL  L   MR+ GY P  ++   +
Sbjct: 792 VKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRETGYDPDLRWVFHE 838



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 185/702 (26%), Positives = 328/702 (46%), Gaps = 80/702 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  I       DV +   +++ Y + G +  A  +FD M DR+ V W  +V GY   
Sbjct: 80  KSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGW 139

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   EA  + +EM R     N   + ++L AC+  G S  + G  VH   L+ N  FD  
Sbjct: 140 GCYEEAMLLVREMGRENLRPNSRTMVALLLACE--GASELRLGRGVHGYCLR-NGMFDS- 195

Query: 125 VSNVLIAMYGSCLE-STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
             +V  A+ G  L         +F+ +  R+++SWN++IS Y   GD     +LF +M  
Sbjct: 196 NPHVATALIGFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLV 255

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           +  ++           L+     + L    L +QI  +  K   + DLY+ +AL++ ++ 
Sbjct: 256 DEVKFD------CVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSN 309

Query: 244 LGNFYYARKIFE-----------QMI---------------------------QKNVVSM 265
            G+   + ++FE            MI                           ++ VV M
Sbjct: 310 NGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIM 369

Query: 266 NGLME----GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
             + E    G  KGK +H ++I+SG+    ++GN L++MY +   ++  + +F  M G D
Sbjct: 370 LSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVD 429

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
            +SWNTMI  L +N    +A   F  MR   +  +++++IS L++C  +  +  G+ IHG
Sbjct: 430 IISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHG 489

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
             +K  ++ +  +  AL  +Y + G  +    +F   P+ D +SWN          A++ 
Sbjct: 490 YVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWN----------AMIX 539

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTIENA 499
           +A             PN VT IN+L++ +  +    G  +HA V +  +++  + ++ NA
Sbjct: 540 KA------------EPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANA 587

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
            ++ Y +CG +   E IF  +  +R+ +SWN+MI+GY  N     AM     M++ G R 
Sbjct: 588 FITMYARCGSLQSAENIFKTLP-KRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRP 646

Query: 560 DHFTFATVLSACASVATLERGMEV-HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
           +  TF +VLSAC+    +E G+++ H+      +  ++V  S +VD+ ++ G ID A  F
Sbjct: 647 NGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREF 706

Query: 619 FDLMPVR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
            D MP+  +   W +++S    +    +A T+F ++    P+
Sbjct: 707 IDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPM 748



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 193/783 (24%), Positives = 339/783 (43%), Gaps = 133/783 (16%)

Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA--AYS 206
           +I+ +D   WNS+I   +   +  ++   +++M+  G    + PN  T   ++ A  A +
Sbjct: 19  KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLG----VLPNNTTLPLVLKACAAQN 74

Query: 207 SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN 266
           +V  G  + + I    +   L+ D+ VG+A+V  + + G    AR +F+ M  ++VV  N
Sbjct: 75  AVERGKSIHRSI----QGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWN 130

Query: 267 GLMEGR-----------------------------------------RKGKEVHGYLIRS 285
            ++ G                                          R G+ VHGY +R+
Sbjct: 131 AMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRN 190

Query: 286 GLFDMVA-VGNGLVNMYAKCGTIDDSRS---VFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
           G+FD    V   L+  Y +     D R    +F  M+ ++ VSWN MISG    G Y +A
Sbjct: 191 GMFDSNPHVATALIGFYLRF----DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKA 246

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           +  F  M  D +     +++  + +CA LG + LG+QIH   +K     D+ + NALL++
Sbjct: 247 LELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNM 306

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           Y++ G L    ++F  +P  D   WNS+I A+A +     EA+  ++ M+  G   +  T
Sbjct: 307 YSNNGSLESSHQLFESVPNRDAPLWNSMISAYA-AFGCHEEAMDLFIRMQSEGVKKDERT 365

Query: 462 FINILAAASSFSMGKL-GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
            + +L+     + G L G  +HA VIK  +  + ++ NALLS Y +   ++  +KIF RM
Sbjct: 366 VVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRM 425

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
            +  D +SWN+MI     N L  +A  L   M +   + + +T  ++L+AC  V  L+ G
Sbjct: 426 -KGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFG 484

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
             +H   ++  +E +  + +AL DMY  CG    A   F+  P R++ SWN+MI      
Sbjct: 485 RSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIXKAE-- 542

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYGLIPQLE 699
                              P+ VT + VLS+ +H   + +G   H     + + L   L 
Sbjct: 543 -------------------PNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLS 583

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMP---------------------------------- 725
             +  + +  R G L   E     +P                                  
Sbjct: 584 LANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDG 643

Query: 726 ITPNSLIWRTVLGACCRANCRKTELGRKAANML---FEMEPQNAVNYVLLANMYASGGKW 782
             PN + + +VL AC  +     E+G +  + +   F + P+  V+Y  + ++ A GG  
Sbjct: 644 FRPNGVTFVSVLSACSHSGF--IEMGLQLFHSMVQDFNVTPE-LVHYSCIVDLLARGGC- 699

Query: 783 EDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDA 842
             + +AR+ +    ++ +A   W  +      +    ++      I+EKL +L + M   
Sbjct: 700 --IDEAREFIDSMPIEPDASV-WRALLSSCRAYSDAKQAKT----IFEKLDKL-EPMNAG 751

Query: 843 GYV 845
            YV
Sbjct: 752 NYV 754



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 235/496 (47%), Gaps = 39/496 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H   +K  F  D+++ N L+N+Y   G L S+ +LF+ +P+R++  W  ++S Y
Sbjct: 279 KLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAY 338

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   EA  +F  M   G   +   +  +L  C+E   SG   G  +H  V+KS    
Sbjct: 339 AAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELA-SGLLKGKSLHAHVIKSGMRI 397

Query: 122 DGLVSNVLIAMYG--SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           D  + N L++MY   +C+ES    ++IF+ ++  D+ISWN++I   ++        +LF 
Sbjct: 398 DASLGNALLSMYTELNCVESV---QKIFDRMKGVDIISWNTMILALARNTLRAQACELFE 454

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           RM+       +KPN YT  S++ A     ++     + I   V K  +  +  + +AL  
Sbjct: 455 RMRES----EIKPNSYTIISILAACED--VTCLDFGRSIHGYVMKHSIEINQPLRTALAD 508

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR--------------------KGKEVH 279
            +   G+   AR +FE    ++++S N ++                        +G+ +H
Sbjct: 509 MYMNCGDEATARDLFEGCPDRDLISWNAMIXKAEPNSVTIINVLSSFTHLATLPQGQSLH 568

Query: 280 GYLIRSGL---FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
            Y+ R G     D+ ++ N  + MYA+CG++  + ++F+ +  ++ +SWN MI+G   NG
Sbjct: 569 AYVTRRGFSLGLDL-SLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNG 627

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI-HGEGLKLGLDSDVSVS 395
              +A++ F  M  DG   +  + +S LS+C+  G+I +G Q+ H       +  ++   
Sbjct: 628 RGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHY 687

Query: 396 NALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAF-ADSEALVSEAVKYYLDMRRA 453
           + ++ L A  G +    +    MP E D   W +++ +  A S+A  ++ +   LD    
Sbjct: 688 SCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEP 747

Query: 454 GWSPNGVTFINILAAA 469
             + N V   N+ A A
Sbjct: 748 MNAGNYVLLSNVYATA 763



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 17/205 (8%)

Query: 7   FHLQILKHGFAY--DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
            H  + + GF+   D+ L N  I +Y R G L SA  +F  +P RN +SW  +++GY   
Sbjct: 567 LHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMN 626

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGF-KFGMQV-HCLVLKSNQTFD 122
           G  ++A   F +M+  GF  N     SVL AC     SGF + G+Q+ H +V   N T +
Sbjct: 627 GRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSH---SGFIEMGLQLFHSMVQDFNVTPE 683

Query: 123 GLVSNVLIAMY--GSCLESTDCARRIFEEIETR-DLISWNSIIS---VYSQRGDTISVFK 176
            +  + ++ +   G C+   D AR   + +    D   W +++S    YS      ++F+
Sbjct: 684 LVHYSCIVDLLARGGCI---DEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFE 740

Query: 177 LFSRMQR-EGFRYSLKPNEYTFGSL 200
              +++      Y L  N Y    L
Sbjct: 741 KLDKLEPMNAGNYVLLSNVYATAGL 765


>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
 gi|194695290|gb|ACF81729.1| unknown [Zea mays]
          Length = 539

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/540 (38%), Positives = 320/540 (59%), Gaps = 5/540 (0%)

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           N L+  Y   G L    K+F  MP  +  +WN+++    +S  L  E++ ++  MRR G 
Sbjct: 4   NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNS-GLNEESLGFFFAMRREGM 62

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            P+     ++    +       G QVHA V++  +  +  + ++L   Y +CG + D E 
Sbjct: 63  QPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEA 122

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
              R     + VS N+ ISG   N     A+     M   G   +  TF + +++C+ +A
Sbjct: 123 AL-RALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLA 181

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            L +G ++HA  ++  ++  V + ++LV MYS+CG +  + R        ++   ++MIS
Sbjct: 182 ALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMIS 241

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
            Y  HGHG KA+ LF QM   G  P+ VTF+ +L ACSH+GL DEG   F+ M++ YGL 
Sbjct: 242 AYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQ 301

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           P ++ ++C+VDLLGR+G L++ E+ I  MP+ P+ +IW+T+L AC     +K ++  + A
Sbjct: 302 PSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSAC--KTQKKFDMAERIA 359

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
             + E++P ++ +YVLL+N+ A+  +WEDV+K R+ M+E  V+KE G SWV +K  +H F
Sbjct: 360 ERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQF 419

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
             GDESH  +  I E L+E+  ++R  GY P       D+E E KE  +++HSEK+A+AF
Sbjct: 420 CTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAF 479

Query: 876 V-LTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             L+    +PIR+MKNLRVC DCH A K +SK++GREIV+RD +RFHHF DGKCSCGDYW
Sbjct: 480 AFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 171/345 (49%), Gaps = 6/345 (1%)

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
           N L+  Y K G ++ +R +F  M  ++  +WN M++GL  +G  EE++  F AMRR+G+ 
Sbjct: 4   NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
              + L S    CA L  ++ G+Q+H   ++ GLD D+ V ++L  +Y   G+L      
Sbjct: 64  PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 123

Query: 415 FFLMPEHDQVSWNSVI-GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
              +P  + VS N+ I G   + +A    A++++  MR AG   N VTF++ + + S  +
Sbjct: 124 LRALPSLNIVSCNTTISGRTQNGDA--EGALEFFCLMRGAGVEANAVTFVSAVTSCSDLA 181

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
               G Q+HA  IK  V     +  +L+  Y +CG + D E++    S   D V  ++MI
Sbjct: 182 ALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSG-TDLVLCSAMI 240

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA-CL 592
           S Y  +    KA+ L   MM  G   +  TF T+L AC+     + GM       +   L
Sbjct: 241 SAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGL 300

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISG 636
           +  V   + +VD+  + G ++ A      MPV+ +   W +++S 
Sbjct: 301 QPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 345



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 158/341 (46%), Gaps = 43/341 (12%)

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRKG---- 275
           L+ G+ + G+   ARK+F++M  +NV + N ++ G                 RR+G    
Sbjct: 6   LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 65

Query: 276 --------------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                               ++VH Y++RSGL   + VG+ L +MY +CG + D  +  R
Sbjct: 66  EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 125

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            +   + VS NT ISG  QNG  E A+  FC MR  G+ ++  + +S ++SC+ L  +  
Sbjct: 126 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 185

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           GQQIH   +K G+D  V V  +L+ +Y+  G L    +V       D V  +++I A+  
Sbjct: 186 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYG- 244

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANET 494
                 +AV  +  M  AG  PN VTF+ +L A S   +   G      + K Y +    
Sbjct: 245 FHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSV 304

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
                ++   G+ G +++ E +   M  + D V W +++S 
Sbjct: 305 KHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 345



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 212/470 (45%), Gaps = 57/470 (12%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N LI  YV+ GDL +A KLFDEMP RN  +W  +V+G T+ G++ E+   F  M R G  
Sbjct: 4   NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC--LESTD 141
            + Y LGS+ R C   G      G QVH  V++S    D  V + L  MY  C  L   +
Sbjct: 64  PDEYGLGSLFRCCA--GLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGE 121

Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
            A R    +   +++S N+ IS  +Q GD     + F  M+  G    ++ N  TF S +
Sbjct: 122 AALRALPSL---NIVSCNTTISGRTQNGDAEGALEFFCLMRGAG----VEANAVTFVSAV 174

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
           T+   S L+     QQI A+  K G+   + V ++LV  ++R G    + ++  +    +
Sbjct: 175 TSC--SDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTD 232

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRS-GLF-DMVAVG------NGLVNMYA--KCGTIDDSR 311
           +V  + ++         HG+  ++ GLF  M+A G        L  +YA    G  D+  
Sbjct: 233 LVLCSAMI----SAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGM 288

Query: 312 SVFRFMIG----KDSVS-WNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTL 364
           + F  M      + SV  +  ++  L ++GC  EA  ++    ++ DG++         L
Sbjct: 289 NCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTL-----L 343

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLKVFFLMPEHD- 422
           S+C +     + ++I    ++  LD   S S  LLS + A +       KV   M E + 
Sbjct: 344 SACKTQKKFDMAERIAERVIE--LDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNV 401

Query: 423 ----QVSWNSVIGAFA------DSEALVSEAVKYYLDM----RRAGWSPN 458
                VSW  + G         +S +   E V+   +M    R+ G++P+
Sbjct: 402 RKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPD 451



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 136/349 (38%), Gaps = 76/349 (21%)

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRM----------------------QREGF-----RY 188
           +SWN +I  Y + GD  +  KLF  M                      +  GF     R 
Sbjct: 1   MSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRRE 60

Query: 189 SLKPNEYTFGSLI--TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
            ++P+EY  GSL    A    V+SG    +Q+ A V ++GL  D+ VGS+L   + R G 
Sbjct: 61  GMQPDEYGLGSLFRCCAGLRDVVSG----RQVHAYVVRSGLDRDMCVGSSLAHMYMRCGF 116

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRR--------------------------------- 273
                     +   N+VS N  + GR                                  
Sbjct: 117 LRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTS 176

Query: 274 --------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                   +G+++H   I++G+  +V V   LV+MY++CG + DS  V     G D V  
Sbjct: 177 CSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLC 236

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           + MIS    +G  ++A+  F  M   G   +  + ++ L +C+  G    G        K
Sbjct: 237 SAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTK 296

Query: 386 L-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
             GL   V     ++ L   +G L+    +   MP + D V W +++ A
Sbjct: 297 TYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 345



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 112/275 (40%), Gaps = 9/275 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +  H  +++ G   D+ + ++L ++Y+R G L         +P  N VS    +SG T 
Sbjct: 85  GRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQ 144

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G +  A + F  M  AG   N     S + +C +   +    G Q+H L +K+      
Sbjct: 145 NGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDL--AALAQGQQIHALAIKTGVDKVV 202

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V   L+ MY  C    D + R+  E    DL+  +++IS Y   G       LF +M  
Sbjct: 203 PVMTSLVHMYSRCGCLGD-SERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMA 261

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G     +PNE TF +L+ A   S L     +     M K  GL   +   + +V    R
Sbjct: 262 AG----AEPNEVTFLTLLYACSHSGLKDEG-MNCFELMTKTYGLQPSVKHYTCIVDLLGR 316

Query: 244 LGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKE 277
            G    A  +   M +Q + V    L+   +  K+
Sbjct: 317 SGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKK 351


>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 228/566 (40%), Positives = 332/566 (58%), Gaps = 12/566 (2%)

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYA--DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
           +Q H   L+  L  +   S+ L+S  A   +G L+   K+F  M   D    N++I  +A
Sbjct: 28  KQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYA 87

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANET 494
            S+    EAV  Y  M   G   +  T+  +LAA +     KLG + H +V+K    ++ 
Sbjct: 88  RSQN-PYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDL 146

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
            + NAL+  Y  CG       +F   S  RD V+WN MI+ +++  L  KA +L+  M +
Sbjct: 147 FVINALIQFYHNCGSFGCACDVFDE-STVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTK 205

Query: 555 RGQ-RLDHFTFATVLSACASVATLERGMEVHACGV---RACLEFDVVIGSALVDMYSKCG 610
               R D  T  +++ ACA +  LERG  +H+      +  +  D+V+ +ALVDMY+KCG
Sbjct: 206 LDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCG 265

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
            ID A + F  M VRNV++WN++I G A HGHG+ A++LF QM+ D  +PD VTF+ +L 
Sbjct: 266 SIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLC 325

Query: 671 ACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNS 730
           ACSHAGLVDEG   F++M   + + P++E + C+VDLL RA ++D    FI  MPI  NS
Sbjct: 326 ACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANS 385

Query: 731 LIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARK 790
           ++W T+LGAC        +L  K    + E+EP +   YV+L+N+YA   +W+   K RK
Sbjct: 386 VLWATLLGACRSGG--HFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRK 443

Query: 791 AMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR-DAGYVPQTK 849
            MK   ++K  GCSW+ +   +H FVAGD SH + + IY  ++E+ +++  D G+VP T 
Sbjct: 444 QMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTA 503

Query: 850 FALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIV 908
             LFD+E E KE  +  HSEK+A+A  +++  S  PIRI+KNLRVC DCHS  K  SK+ 
Sbjct: 504 NVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVY 563

Query: 909 GREIVLRDSNRFHHFNDGKCSCGDYW 934
            REIV RD +RFHHF +G CSC D+W
Sbjct: 564 NREIVARDRSRFHHFKEGSCSCMDFW 589



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 179/381 (46%), Gaps = 10/381 (2%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYA--KCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
           K K+ H  L+R+ L       + L++  A    G ++ +R +F  M   D    NTMI G
Sbjct: 26  KTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRG 85

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
             ++    EA+  +  M   G+   N++    L++CA LG + LG++ H E LK G  SD
Sbjct: 86  YARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSD 145

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           + V NAL+  Y + G       VF      D V+WN +I A  + + L  +A     +M 
Sbjct: 146 LFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLN-KGLSEKAFDLLDEMT 204

Query: 452 RA-GWSPNGVTFINILAAAS---SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
           +     P+ VT ++++ A +   +   GK  H    ++ K+ +  +  +E AL+  Y KC
Sbjct: 205 KLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKC 264

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
           G +D   ++F RM   R+  +WN++I G   +     A++L   M       D  TF  +
Sbjct: 265 GSIDLALQVFRRM-RVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIAL 323

Query: 568 LSACASVATLERGMEV-HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR- 625
           L AC+    ++ G+ +  A   +  +E  +     +VD+  +  ++D A  F + MP++ 
Sbjct: 324 LCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKA 383

Query: 626 NVYSWNSMISGYARHGHGDKA 646
           N   W +++      GH D A
Sbjct: 384 NSVLWATLLGACRSGGHFDLA 404



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 126/271 (46%), Gaps = 9/271 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYV--RVGDLASASKLFDEMPDRNSVSWACIVSGY 61
            K  H  +L+    ++    + LI+       GDL  A KLF +M + +      ++ GY
Sbjct: 27  TKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGY 86

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                  EA  ++  MV  G  ++ Y    VL AC   G    K G + HC VLK+    
Sbjct: 87  ARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLG--AVKLGRRFHCEVLKNGFGS 144

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V N LI  Y +C  S  CA  +F+E   RD+++WN +I+ +  +G +   F L   M
Sbjct: 145 DLFVINALIQFYHNC-GSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEM 203

Query: 182 QREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
            +     +L+P+E T  SL+ A A    L     L      + K  +  DL + +ALV  
Sbjct: 204 TKLD---NLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDM 260

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           +A+ G+   A ++F +M  +NV + N L+ G
Sbjct: 261 YAKCGSIDLALQVFRRMRVRNVFTWNALIGG 291



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 113/226 (50%), Gaps = 16/226 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  + FH ++LK+GF  D+F+ N LI  Y   G    A  +FDE   R+ V+W  +++ +
Sbjct: 128 KLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAH 187

Query: 62  THKGMSNEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ- 119
            +KG+S +A  +  EM +   L  +   + S++ AC + G    + G  +H    + ++ 
Sbjct: 188 LNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLG--NLERGKFLHSYSKELDKF 245

Query: 120 --TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
               D ++   L+ MY  C  S D A ++F  +  R++ +WN++I   +  G       L
Sbjct: 246 EINCDLVLETALVDMYAKC-GSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISL 304

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVK 223
           F +M+ +     L P++ TF +L+ A      S + L+ + LAM +
Sbjct: 305 FDQMEHD----KLMPDDVTFIALLCAC-----SHAGLVDEGLAMFQ 341


>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/564 (39%), Positives = 320/564 (56%), Gaps = 40/564 (7%)

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
           D+G L     VF  +P     + NS+I  + +   L  +A+ +Y  M   G  P+  TF 
Sbjct: 24  DSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKN-LPRQAILFYQLMMLQGLDPDRFTFP 82

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE- 522
           ++  +      GK   Q+H    K   A++  I+N L++ Y  CG +    K+F +M   
Sbjct: 83  SLFKSCGVLCEGK---QLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNK 139

Query: 523 -------------------------RRDEVS-----WNSMISGYIHNELLPKAMNLVWFM 552
                                    RR E++     WN MI+G++ +    +A++L   M
Sbjct: 140 SVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEM 199

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRI 612
              G + D  T A++L AC  +  LE G  +H    +  +E DV +G+ALVDMY+KCG I
Sbjct: 200 QLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSI 259

Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
           + A R F  MP ++V +W ++I G A  G G KAL LF +M++    PD +TFVGVL+AC
Sbjct: 260 ESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAAC 319

Query: 673 SHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI 732
           SHAGLV+EG  +F SM   YG+ P +E + CMVD+LGRAG + + E+ I  MP+ P+  +
Sbjct: 320 SHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFV 379

Query: 733 WRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKA 791
              +L AC    N    E   +AA  L E++P+N   YVLL+N+Y+S   WE   K R+ 
Sbjct: 380 LVGLLSACRIHGNLVVAE---RAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMREL 436

Query: 792 MKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFA 851
           M E  +KK  GCS + +   VH FV GD SHP+   IYE L ++ ++++ AGYVP     
Sbjct: 437 MVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEV 496

Query: 852 LFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGR 910
           LFD++ + KE+ +S HSEK+A+AF +L+     PIR++KNLRVC DCHSA KFIS++  R
Sbjct: 497 LFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNR 556

Query: 911 EIVLRDSNRFHHFNDGKCSCGDYW 934
           EI++RD NRFHHF  G CSC D+W
Sbjct: 557 EIIVRDRNRFHHFTKGSCSCRDFW 580



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 138/304 (45%), Gaps = 37/304 (12%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW-------- 325
           +GK++H +  + G      + N L+NMY+ CG +  +R VF  M+ K  VSW        
Sbjct: 93  EGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYA 152

Query: 326 ------------------------NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
                                   N MI+G  ++  YEEA+  F  M+  G+     ++ 
Sbjct: 153 QWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMA 212

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S L +C  LG + LG+ +H    K  ++ DV++  AL+ +YA  G +   ++VF  MPE 
Sbjct: 213 SLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEK 272

Query: 422 DQVSWNSVIGAFAD-SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-H 479
           D ++W ++I   A   + L  +A++ + +M+ +   P+ +TF+ +LAA S   +   G  
Sbjct: 273 DVMTWTALIVGLAMCGQGL--KALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIA 330

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIH 538
             ++   KY +         ++   G+ G + + E +   M    D      ++S   IH
Sbjct: 331 YFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIH 390

Query: 539 NELL 542
             L+
Sbjct: 391 GNLV 394



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 138/315 (43%), Gaps = 47/315 (14%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H    K GFA D ++ NTL+N+Y   G L SA K+FD+M +++ VSWA ++  Y 
Sbjct: 93  EGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYA 152

Query: 63  HKGMSNEACKMFK--------------------------------EMVRAGFLLNRYALG 90
              + +EA K+F+                                EM  +G   ++  + 
Sbjct: 153 QWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMA 212

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           S+L AC   G    + G  +H  + K     D  +   L+ MY  C  S + A R+F+E+
Sbjct: 213 SLLIACTHLG--ALELGKWLHVYIEKEKIEVDVALGTALVDMYAKC-GSIESAMRVFQEM 269

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF-GSLITAAYSSVL 209
             +D+++W ++I   +  G  +   +LF  MQ       +KP+  TF G L   +++ ++
Sbjct: 270 PEKDVMTWTALIVGLAMCGQGLKALELFHEMQMS----EVKPDAITFVGVLAACSHAGLV 325

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNVVSMNGL 268
           +    +    +M  K G+   +     +V    R G    A  + + M +  +   + GL
Sbjct: 326 NEG--IAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGL 383

Query: 269 MEGRRKGKEVHGYLI 283
           +   R    +HG L+
Sbjct: 384 LSACR----IHGNLV 394



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 123/266 (46%), Gaps = 36/266 (13%)

Query: 34  GDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVL 93
           G L  A  +F+++P+  + +   I+ GYT+K +  +A   ++ M+  G   +R+   S+ 
Sbjct: 26  GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85

Query: 94  RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
           ++C          G Q+HC   K     D  + N L+ MY +C      AR++F+++  +
Sbjct: 86  KSC-----GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNC-GCLVSARKVFDKMVNK 139

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQ----------------------------REG 185
            ++SW ++I  Y+Q        KLF RM+                             E 
Sbjct: 140 SVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEM 199

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
               +K ++ T  SL+ A   + L    L + +   ++K  +  D+ +G+ALV  +A+ G
Sbjct: 200 QLSGVKGDKVTMASLLIAC--THLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCG 257

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEG 271
           +   A ++F++M +K+V++   L+ G
Sbjct: 258 SIESAMRVFQEMPEKDVMTWTALIVG 283


>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/616 (38%), Positives = 341/616 (55%), Gaps = 15/616 (2%)

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N +I  L + G  ++AI   C         +  +    + SCA    +  G  +H   + 
Sbjct: 51  NQLIQSLCKGGNLKQAIHLLCCEPN----PTQRTFEHLICSCAQQNSLSDGLDVHRRLVS 106

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G D D  ++  L+++Y + G + R  KVF    E     WN++  A A       E + 
Sbjct: 107 SGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALA-MVGCGKELLD 165

Query: 446 YYLDMRRAGWSPNGVTFINILAA--ASSFSMGKL--GHQVHAQVIKYNVANETTIENALL 501
            Y+ M   G   +  T+  +L A   S  S+  L  G ++HA ++++       +   LL
Sbjct: 166 LYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLL 225

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR--L 559
             Y K G +     +F  M  + + VSW++MI+ +  NE+  KA+ L   MM        
Sbjct: 226 DVYAKFGSVSYANSVFCAMPTK-NFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVP 284

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           +  T   VL ACA +A LE+G  +H   +R  L+  + + +AL+ MY +CG I    R F
Sbjct: 285 NSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVF 344

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           D M  R+V SWNS+IS Y  HG G KA+ +F  M   G  P +++F+ VL ACSHAGLV+
Sbjct: 345 DNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVE 404

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           EG   F+SM   Y + P +E ++CMVDLLGRA  LD+  + I  M   P   +W ++LG+
Sbjct: 405 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGS 464

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKK 799
            CR +C   EL  +A+ +LFE+EP+NA NYVLLA++YA    W +     K ++   ++K
Sbjct: 465 -CRIHC-NVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQK 522

Query: 800 EAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES 859
             GCSW+ +K  V+ FV+ DE +P+ + I+  L +L+ +M+  GYVPQT   L+DL+ E 
Sbjct: 523 LPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEE 582

Query: 860 KEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSN 918
           KE +V  HSEK+AVAF L    K   IRI KNLR+C DCH+  KFISK   REI++RD N
Sbjct: 583 KERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVN 642

Query: 919 RFHHFNDGKCSCGDYW 934
           RFHHF DG CSCGDYW
Sbjct: 643 RFHHFKDGVCSCGDYW 658



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 191/416 (45%), Gaps = 56/416 (13%)

Query: 192 PNEYTFGSLI-TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
           P + TF  LI + A  + LS    + + L     +G   D ++ + L++ +  LG+   A
Sbjct: 76  PTQRTFEHLICSCAQQNSLSDGLDVHRRLV---SSGFDQDPFLATKLINMYYELGSIDRA 132

Query: 251 RKIFEQMIQKNV-----------------------VSMN--GLMEGR------------- 272
           RK+F++  ++ +                       V MN  G+   R             
Sbjct: 133 RKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVS 192

Query: 273 -------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
                  +KGKE+H +++R G    + V   L+++YAK G++  + SVF  M  K+ VSW
Sbjct: 193 ELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSW 252

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGL--MSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           + MI+   +N    +A+  F  M  +    + ++ ++++ L +CA L  +  G+ IHG  
Sbjct: 253 SAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYI 312

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           L+ GLDS + V NAL+++Y   G +    +VF  M   D VSWNS+I  +        +A
Sbjct: 313 LRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYG-MHGFGKKA 371

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLS 502
           ++ + +M   G SP+ ++FI +L A S   + + G  +   ++ KY +         ++ 
Sbjct: 372 IQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVD 431

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMI-SGYIH--NELLPKAMNLVWFMMQR 555
             G+   +D+  K+   M        W S++ S  IH   EL  +A  L++ +  R
Sbjct: 432 LLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPR 487



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 183/421 (43%), Gaps = 59/421 (14%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G+ VH  ++ S    D  ++  LI MY   L S D AR++F+E   R +  WN++    +
Sbjct: 97  GLDVHRRLVSSGFDQDPFLATKLINMYYE-LGSIDRARKVFDETRERTIYVWNALFRALA 155

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ--QILAMVKK 224
             G    +  L+ +M   G    +  + +T+  ++ A   S LS S L +  +I A + +
Sbjct: 156 MVGCGKELLDLYVQMNWIG----IPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILR 211

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL---------------- 268
            G  ++++V + L+  +A+ G+  YA  +F  M  KN VS + +                
Sbjct: 212 HGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALEL 271

Query: 269 ---------------------------MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
                                      +    +GK +HGY++R GL  ++ V N L+ MY
Sbjct: 272 FQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMY 331

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
            +CG I   + VF  M  +D VSWN++IS    +G  ++AI  F  M   G   S  S I
Sbjct: 332 GRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFI 391

Query: 362 STLSSCASLGWIMLGQQIHGEGL-KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP- 419
           + L +C+  G +  G+ +    L K  +   +     ++ L   A  L   +K+   M  
Sbjct: 392 TVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHF 451

Query: 420 EHDQVSWNSVIGA---FADSE-ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
           E     W S++G+     + E A  +  + + L+ R AG   N V   +I A A  +S  
Sbjct: 452 EPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAG---NYVLLADIYAEAKMWSEA 508

Query: 476 K 476
           K
Sbjct: 509 K 509



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 117/223 (52%), Gaps = 11/223 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  IL+HG+  ++ +  TL++VY + G ++ A+ +F  MP +N VSW+ +++ +
Sbjct: 200 QKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACF 259

Query: 62  THKGMSNEACKMFKEMVRAGF--LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
               M  +A ++F+ M+      + N   + +VL+AC   G +  + G  +H  +L+   
Sbjct: 260 AKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQAC--AGLAALEQGKLIHGYILRRGL 317

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
                V N LI MYG C E     +R+F+ ++ RD++SWNS+IS+Y   G      ++F 
Sbjct: 318 DSILPVLNALITMYGRCGEIL-MGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFE 376

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILA 220
            M  +G      P+  +F +++ A   +  V  G  L + +L+
Sbjct: 377 NMIHQGS----SPSYISFITVLGACSHAGLVEEGKILFESMLS 415



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 147/324 (45%), Gaps = 19/324 (5%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H +++  GF  D FL   LIN+Y  +G +  A K+FDE  +R    W  +       G  
Sbjct: 101 HRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCG 160

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRAC--QECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
            E   ++ +M   G   +R+    VL+AC   E   S  + G ++H  +L+     +  V
Sbjct: 161 KELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHV 220

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
              L+ +Y     S   A  +F  + T++ +SW+++I+ +++    +   +LF  M  E 
Sbjct: 221 MTTLLDVYAK-FGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEA 279

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVGSALVSGFA 242
             +   PN  T  +++ A      +G   L+Q   I   + + GL S L V +AL++ + 
Sbjct: 280 --HDSVPNSVTMVNVLQAC-----AGLAALEQGKLIHGYILRRGLDSILPVLNALITMYG 332

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGL-----MEG-RRKGKEVHGYLIRSGLFDMVAVGNG 296
           R G     +++F+ M  ++VVS N L     M G  +K  ++   +I  G          
Sbjct: 333 RCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFIT 392

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGK 320
           ++   +  G +++ + +F  M+ K
Sbjct: 393 VLGACSHAGLVEEGKILFESMLSK 416


>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 246/664 (37%), Positives = 371/664 (55%), Gaps = 60/664 (9%)

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG--KDSVSWNTMISGLDQNG 336
           H ++++ G      V N +++MYA+ G I  +R VF  +    +    WN M+SG     
Sbjct: 118 HAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSG----- 172

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
                   +     +G     F ++                           + +V    
Sbjct: 173 --------YWKWESEGQAQWLFDVMP--------------------------ERNVITWT 198

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           A+++ YA    L    + F  MPE   VSWN+++  +A +  L  EA++ + +M  AG  
Sbjct: 199 AMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQN-GLAEEALRLFDEMVNAGIE 257

Query: 457 PNGVTFINILAAASSFS----MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           P+  T++ +++A SS         L   +H + I+ N      +  ALL  Y K G++D 
Sbjct: 258 PDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLN----CFVRTALLDMYAKFGDLDS 313

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ-RGQRLDHFTFATVLSAC 571
             K+F  M  R + V+WNSMI+GY  N     A+ L   M+  +    D  T  +V+SAC
Sbjct: 314 ARKLFNTMPGR-NVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISAC 372

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
             +  LE G  V        ++  +   +A++ MYS+CG ++ A R F  M  R+V S+N
Sbjct: 373 GHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYN 432

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           ++ISG+A HGHG +A+ L S MK  G  PD VTF+GVL+ACSHAGL++EG K F+S+   
Sbjct: 433 TLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD- 491

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
               P ++ ++CMVDLLGR GEL+  +  + +MP+ P++ ++ ++L A  R + ++ ELG
Sbjct: 492 ----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNAS-RIH-KQVELG 545

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
             AAN LFE+EP N+ N++LL+N+YAS G+W+DV + R+AMK+  VKK  G SWV     
Sbjct: 546 ELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGK 605

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
           +H F+  D SH   D IY+ L EL +KMR+AGY+      L D+E E KE++V  HSEK+
Sbjct: 606 LHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKL 665

Query: 872 AVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           A+ + +L   +   IR++KNLRVC DCH+A K ISK+ GR I++RD+NRFH FNDG CSC
Sbjct: 666 AICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSC 725

Query: 931 GDYW 934
            DYW
Sbjct: 726 KDYW 729



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 243/492 (49%), Gaps = 38/492 (7%)

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           +F      ++  + S++  YS   D   V  ++ +MQ  G R    P+ + +  LI +A 
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVR----PDAFVYPILIKSAG 111

Query: 206 SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM--IQKNVV 263
           +  +          A V K G  SD +V +A++  +ARLG   +ARK+F+++   ++ V 
Sbjct: 112 TGGIG-------FHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVA 164

Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN-----GLVNMYAKCGTIDDSRSVFRFMI 318
             N ++ G  K  E  G      LFD++   N      +V  YAK   ++ +R  F  M 
Sbjct: 165 DWNAMVSGYWKW-ESEGQA--QWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMP 221

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-- 376
            +  VSWN M+SG  QNG  EEA+  F  M   G+     + ++ +S+C+S G   L   
Sbjct: 222 ERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAAS 281

Query: 377 --QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
             + +H + ++L    +  V  ALL +YA  G L    K+F  MP  + V+WNS+I  +A
Sbjct: 282 LVRTLHQKRIQL----NCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYA 337

Query: 435 DS--EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN 492
            +   A+  E  K  +  ++   +P+ VT +++++A       +LG+ V   + +  +  
Sbjct: 338 QNGQSAMAIELFKEMITAKKL--TPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKL 395

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
             +  NA++  Y +CG M+D +++F  M+  RD VS+N++ISG+  +    +A+NL+  M
Sbjct: 396 SISGHNAMIFMYSRCGSMEDAKRVFQEMAT-RDVVSYNTLISGFAAHGHGVEAINLMSTM 454

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRI 612
            + G   D  TF  VL+AC+    LE G +V        ++      + +VD+  + G +
Sbjct: 455 KEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDH----YACMVDLLGRVGEL 510

Query: 613 DYASRFFDLMPV 624
           + A R  + MP+
Sbjct: 511 EDAKRTMERMPM 522



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 107/457 (23%), Positives = 195/457 (42%), Gaps = 96/457 (21%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVSGYTHK 64
           FH  +LK G   D F+ N +I++Y R+G +  A K+FDE+PD  R    W  +VSGY   
Sbjct: 117 FHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKW 176

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
               +A  +F  M     +                                    T+  +
Sbjct: 177 ESEGQAQWLFDVMPERNVI------------------------------------TWTAM 200

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V+        + ++  + ARR F+ +  R ++SWN+++S Y+Q G      +LF  M   
Sbjct: 201 VTGY------AKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNA 254

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G    ++P+E T+ ++I+A  S       L   ++  + +  +  + +V +AL+  +A+ 
Sbjct: 255 G----IEPDETTWVTVISACSSR--GDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKF 308

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------ 274
           G+   ARK+F  M  +NVV+ N ++ G  +                              
Sbjct: 309 GDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSV 368

Query: 275 ------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
                       G  V  +L  + +   ++  N ++ MY++CG+++D++ VF+ M  +D 
Sbjct: 369 ISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDV 428

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           VS+NT+ISG   +G   EAI     M+  G+     + I  L++C+  G +  G+++  E
Sbjct: 429 VSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVF-E 487

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
            +K   D  +     ++ L    G L    +    MP
Sbjct: 488 SIK---DPAIDHYACMVDLLGRVGELEDAKRTMERMP 521



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 131/534 (24%), Positives = 235/534 (44%), Gaps = 49/534 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKL-FDEMPDRNSVSWACIVSGYTH 63
           +  H QI+ +   +  +    LIN   R+      + L F+   + N   +  ++  Y+H
Sbjct: 18  RQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRFYSH 77

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                +   M+++M   G   + +    ++++    G  G  F    H  VLK     D 
Sbjct: 78  LQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSA---GTGGIGF----HAHVLKLGHGSDA 130

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIE--TRDLISWNSIISVYSQRGDTISVFKLFSRM 181
            V N +I MY   L     AR++F+EI    R +  WN+++S Y +         LF  M
Sbjct: 131 FVRNAVIDMYAR-LGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVM 189

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
                      N  T+ +++T  Y+ V       +    M +++     +   +A++SG+
Sbjct: 190 PER--------NVITWTAMVT-GYAKVKDLEAARRYFDCMPERS-----VVSWNAMLSGY 235

Query: 242 ARLGNFYYARKIFEQMIQKNV-------VSMNGLMEGRRKG-------KEVHGYLIRSGL 287
           A+ G    A ++F++M+   +       V++      R          + +H   I+   
Sbjct: 236 AQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNC 295

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
           F    V   L++MYAK G +D +R +F  M G++ V+WN+MI+G  QNG    AI  F  
Sbjct: 296 F----VRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKE 351

Query: 348 M-RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
           M     L     +++S +S+C  LG + LG  +     +  +   +S  NA++ +Y+  G
Sbjct: 352 MITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCG 411

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
            +    +VF  M   D VS+N++I  FA     V EA+     M+  G  P+ VTFI +L
Sbjct: 412 SMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGV-EAINLMSTMKEGGIEPDRVTFIGVL 470

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
            A S   + + G +V   +    + +   + + L    G+ GE++D ++   RM
Sbjct: 471 TACSHAGLLEEGRKVFESIKDPAIDHYACMVDLL----GRVGELEDAKRTMERM 520



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/326 (21%), Positives = 137/326 (42%), Gaps = 29/326 (8%)

Query: 474 MGKLGH--QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
           +G   H  Q+HAQ+I  ++ +       L++   +         +    +   +   + S
Sbjct: 11  VGNFNHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTS 70

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC 591
           M+  Y H +   K + +   M   G R D F +  ++ +  +      G+  HA  ++  
Sbjct: 71  MLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGT-----GGIGFHAHVLKLG 125

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMP--VRNVYSWNSMISGYARHGHGDKALTL 649
              D  + +A++DMY++ G I +A + FD +P   R V  WN+M+SGY +     +A  L
Sbjct: 126 HGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWL 185

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           F  M    P  + +T+  +++  +    ++   ++F  M +       +  ++ M+    
Sbjct: 186 FDVM----PERNVITWTAMVTGYAKVKDLEAARRYFDCMPE-----RSVVSWNAMLSGYA 236

Query: 710 RAGELDKIEEFINKM---PITPNSLIWRTVLGACCRAN--CRKTELGRKAANMLFEMEPQ 764
           + G  ++     ++M    I P+   W TV+ AC      C    L R       ++   
Sbjct: 237 QNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQL--- 293

Query: 765 NAVNYVLLANMYASGGKWEDVAKARK 790
           N      L +MYA   K+ D+  ARK
Sbjct: 294 NCFVRTALLDMYA---KFGDLDSARK 316


>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 216/559 (38%), Positives = 322/559 (57%), Gaps = 5/559 (0%)

Query: 377  QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
            +Q+H +    G+  ++ V+N L+  Y+    L     +F  M   D VSW+ ++G FA  
Sbjct: 755  RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814

Query: 437  EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
               ++     + ++ R G  P+  T   ++ A       ++G  +H  V K+ +  +  +
Sbjct: 815  GDYMN-CFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFV 873

Query: 497  ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
              AL+  YGKC E++D   +F +M ER D V+W  MI GY       +++ L   M + G
Sbjct: 874  CAALVDMYGKCREIEDARFLFDKMXER-DLVTWTVMIGGYAECGNANESLVLFDKMREEG 932

Query: 557  QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
               D     TV+ ACA +  + +   +     R   + DV++G+A++DM++KCG ++ A 
Sbjct: 933  VVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAR 992

Query: 617  RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
              FD M  +NV SW++MI+ Y  HG G KAL LF  M   G LP+ +T V +L ACSHAG
Sbjct: 993  EIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAG 1052

Query: 677  LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
            LV+EG + F  M + Y +   ++ ++C+VDLLGRAG LD+  + I  M    +  +W   
Sbjct: 1053 LVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAF 1112

Query: 737  LGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAE 796
            LGA CR + +   L  KAA  L E++PQN  +Y+LL+N+YA+ G+WEDVAK R  M +  
Sbjct: 1113 LGA-CRTH-KDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRR 1170

Query: 797  VKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLE 856
            +KK  G +W+ + +  H F  GD +HP    IYE LK L  K+   GYVP T F L D++
Sbjct: 1171 LKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVD 1230

Query: 857  PESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLR 915
             E K  ++  HSEK+A+AF ++      PIRI+KNLRVCGDCH+  K +S I GR I++R
Sbjct: 1231 EELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVR 1290

Query: 916  DSNRFHHFNDGKCSCGDYW 934
            D+NRFHHF +G CSCGDYW
Sbjct: 1291 DANRFHHFKEGACSCGDYW 1309



 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 195/533 (36%), Positives = 296/533 (55%), Gaps = 8/533 (1%)

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           IS L +C +L  +   +Q+H +    G+  ++ V+N L+  Y+    L     +F  M  
Sbjct: 66  ISALVNCRNLTQV---RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCV 122

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            D VSW+ ++G FA     ++     + ++ R G  P+  T   ++ A       ++G  
Sbjct: 123 RDSVSWSVMVGGFAKVGDYIN-CFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRL 181

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +H  V K+ +  +  +  AL+  Y KC E++D   +F +M ER D V+W  MI GY    
Sbjct: 182 IHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQER-DLVTWTVMIGGYAECG 240

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
              +++ L   M + G   D     TV+ ACA +  + +   +     R   + DV++G+
Sbjct: 241 KANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGT 300

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           A++DMY+KCG ++ A   FD M  +NV SW++MI+ Y  HG G KAL LF  M   G LP
Sbjct: 301 AMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLP 360

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           D +T   +L ACSHAGLV+EG + F SM + Y +   ++ ++C+VDLLGRAG LD+  + 
Sbjct: 361 DKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKL 420

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           I  M I  +  +W   LGA CR + +   L  KAA  L E++ QN  +YVLL+N+YA+ G
Sbjct: 421 IKSMTIEKDEGLWGAFLGA-CRTH-KDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAG 478

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
           +WEDVAK R  M +  +KK  G +W+ + +  H F  GD +HP    IYE LK L+ K+ 
Sbjct: 479 RWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLE 538

Query: 841 DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLR 892
             GYVP T F L D++ E K  ++  HSEK+A+AF ++      PIRI+KNLR
Sbjct: 539 LVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 212/459 (46%), Gaps = 33/459 (7%)

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
            F++ +++  +     +V+   L + R    +VH      G+ + + V N L+  Y+   
Sbjct: 53  KFHFLQRLNPKFYISALVNCRNLTQVR----QVHAQASVHGMLENIVVANKLIYFYSYYR 108

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            +DD+  +F  M  +DSVSW+ M+ G  + G Y      F  + R G    N++L   + 
Sbjct: 109 ALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIR 168

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           +C  L  + +G+ IH    K GLD D  V  AL+ +Y     +     +F  M E D V+
Sbjct: 169 ACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVT 228

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           W  +IG +A+     +E++  +  MR  G  P+ V  + ++     F+  KLG    A++
Sbjct: 229 WTVMIGGYAEC-GKANESLVLFEKMREEGVVPDKVAMVTVV-----FACAKLGAMHKARI 282

Query: 486 IKYNVAN-----ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           I   +       +  +  A++  Y KCG ++   +IF RM E ++ +SW++MI+ Y ++ 
Sbjct: 283 IDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEE-KNVISWSAMIAAYGYHG 341

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC-----GVRACLEFD 595
              KA++L   M+  G   D  T A++L AC+    +E G+   +       VR     D
Sbjct: 342 QGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRT----D 397

Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSMISGYARHGH---GDKALTLFS 651
           V   + +VD+  + GR+D A +    M + ++   W + +     H      +KA T  S
Sbjct: 398 VKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAAT--S 455

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
            ++L    P H   +  + A  +AG  ++  K    MSQ
Sbjct: 456 LLELQSQNPGHYVLLSNIYA--NAGRWEDVAKIRDLMSQ 492



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 178/388 (45%), Gaps = 7/388 (1%)

Query: 276  KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
            ++VH      G+   + V N LV  Y+    +DD+  +F  M  +DSVSW+ M+ G  + 
Sbjct: 755  RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814

Query: 336  GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
            G Y      F  + R G    N++L   + +C  L  + +G+ IH    K GLD D  V 
Sbjct: 815  GDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVC 874

Query: 396  NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
             AL+ +Y     +     +F  M E D V+W  +IG +A+     +E++  +  MR  G 
Sbjct: 875  AALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAEC-GNANESLVLFDKMREEGV 933

Query: 456  SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
             P+ V  + ++ A +          +   + +     +  +  A++  + KCG ++   +
Sbjct: 934  VPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESARE 993

Query: 516  IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
            IF RM E ++ +SW++MI+ Y ++    KA++L   M++ G   +  T  ++L AC+   
Sbjct: 994  IFDRMEE-KNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAG 1052

Query: 576  TLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSM 633
             +E G+   +       +  DV   + +VD+  + GR+D A +    M   ++   W + 
Sbjct: 1053 LVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAF 1112

Query: 634  ISGYARHGH---GDKALTLFSQMKLDGP 658
            +     H      +KA T   +++   P
Sbjct: 1113 LGACRTHKDVXLAEKAATSLLELQPQNP 1140



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 165/346 (47%), Gaps = 20/346 (5%)

Query: 8    HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
            H Q   HG   ++ + N L+  Y     L  A  LFD M  R+SVSW+ +V G+   G  
Sbjct: 758  HXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDY 817

Query: 68   NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
                  F+E++R G   + Y L  V+RAC++      + G  +H +V K     D  V  
Sbjct: 818  MNCFGTFRELIRCGARPDNYTLPFVIRACRDL--KNLQMGRLIHHIVYKFGLDLDHFVCA 875

Query: 128  VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
             L+ MYG C E  D AR +F+++  RDL++W  +I  Y++ G+      LF +M+ EG  
Sbjct: 876  ALVDMYGKCREIED-ARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEG-- 932

Query: 188  YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
              + P++    +++ A   + L   +  + I   +++     D+ +G+A++   A+ G  
Sbjct: 933  --VVPDKVAMVTVVFAC--AKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCV 988

Query: 248  YYARKIFEQMIQKNVVSMNGLMEGR------RKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
              AR+IF++M +KNV+S + ++         RK  ++   ++RSG+         L+   
Sbjct: 989  ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYAC 1048

Query: 302  AKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEAI 342
            +  G +++    F  M     +  D   +  ++  L + G  +EA+
Sbjct: 1049 SHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEAL 1094



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 200/429 (46%), Gaps = 34/429 (7%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H Q   HG   ++ + N LI  Y     L  A  LFD M  R+SVSW+ +V G+   G  
Sbjct: 82  HAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDY 141

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
                 F+E++R G   + Y L  V+RAC++      + G  +H +V K     D  V  
Sbjct: 142 INCFGTFRELIRCGARPDNYTLPFVIRACRDL--KNLQMGRLIHHIVYKFGLDLDHFVCA 199

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY  C E  D AR +F++++ RDL++W  +I  Y++ G       LF +M+ EG  
Sbjct: 200 ALVDMYVKCREIED-ARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEG-- 256

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQIL-AMVKKAGLLSDLYVGSALVSGFARLGN 246
             + P++    +++T  ++    G+    +I+   +++     D+ +G+A++  +A+ G 
Sbjct: 257 --VVPDKV---AMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGC 311

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGR------RKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
              AR+IF++M +KNV+S + ++         RK  ++   ++ SG+         L+  
Sbjct: 312 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYA 371

Query: 301 YAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAM---RRDG 352
            +  G +++    F  M     +  D   +  ++  L + G  +EA+    +M   + +G
Sbjct: 372 CSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEG 431

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRC 411
           L        + L +C +   ++L ++     L+  L S       LLS +YA+AG     
Sbjct: 432 LWG------AFLGACRTHKDVVLAEKAATSLLE--LQSQNPGHYVLLSNIYANAGRWEDV 483

Query: 412 LKVFFLMPE 420
            K+  LM +
Sbjct: 484 AKIRDLMSQ 492



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 149/320 (46%), Gaps = 14/320 (4%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +L H  + K G   D F+C  L+++YV+  ++  A  LFD+M +R+ V+W  ++ GY  
Sbjct: 179 GRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAE 238

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G +NE+  +F++M   G + ++ A+ +V+ AC + G         +   + +     D 
Sbjct: 239 CGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLG--AMHKARIIDDYIQRKKFQLDV 296

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           ++   +I MY  C    + AR IF+ +E +++ISW+++I+ Y   G       LF  M  
Sbjct: 297 ILGTAMIDMYAKC-GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLS 355

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G    + P++ T  SL+ A   + L     L+   +M +   + +D+   + +V    R
Sbjct: 356 SG----MLPDKITLASLLYACSHAGLVEEG-LRFFSSMWEDYSVRTDVKHYTCVVDLLGR 410

Query: 244 LGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKE-VHGYLIRSGLFDMVAVGNG----L 297
            G    A K+ + M I+K+       +   R  K+ V      + L ++ +   G    L
Sbjct: 411 AGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLL 470

Query: 298 VNMYAKCGTIDDSRSVFRFM 317
            N+YA  G  +D   +   M
Sbjct: 471 SNIYANAGRWEDVAKIRDLM 490



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 163/375 (43%), Gaps = 50/375 (13%)

Query: 101  PSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNS 160
            P+      QVH          + +V+N L+  Y S   + D A  +F+ +  RD +SW+ 
Sbjct: 748  PTNLTQVRQVHXQASVHGMLQNLIVANKLVXFY-SYYRALDDAYGLFDGMCVRDSVSWSV 806

Query: 161  IISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILA 220
            ++  +++ GD ++ F  F    RE  R   +P+ YT   +I A     L    + + I  
Sbjct: 807  MVGGFAKVGDYMNCFGTF----RELIRCGARPDNYTLPFVIRACRD--LKNLQMGRLIHH 860

Query: 221  MVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--------- 271
            +V K GL  D +V +ALV  + +      AR +F++M ++++V+   ++ G         
Sbjct: 861  IVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANE 920

Query: 272  --------------------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVN 299
                                              K + +  Y+ R      V +G  +++
Sbjct: 921  SLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMID 980

Query: 300  MYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
            M+AKCG ++ +R +F  M  K+ +SW+ MI+    +G   +A+  F  M R G++ +  +
Sbjct: 981  MHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKIT 1040

Query: 360  LISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
            L+S L +C+  G +  G +      +   +  DV     ++ L   AG L   LK+   M
Sbjct: 1041 LVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSM 1100

Query: 419  P-EHDQVSWNSVIGA 432
              E D+  W + +GA
Sbjct: 1101 TXEKDEGLWGAFLGA 1115



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 7/200 (3%)

Query: 4    AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
             +L H  + K G   D F+C  L+++Y +  ++  A  LFD+M +R+ V+W  ++ GY  
Sbjct: 855  GRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAE 914

Query: 64   KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
             G +NE+  +F +M   G + ++ A+ +V+ AC + G         +   + +     D 
Sbjct: 915  CGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLG--AMHKARTIDDYIQRKKFQLDV 972

Query: 124  LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            ++   +I M+  C    + AR IF+ +E +++ISW+++I+ Y   G       LF  M R
Sbjct: 973  ILGTAMIDMHAKC-GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLR 1031

Query: 184  EGFRYSLKPNEYTFGSLITA 203
             G    + PN+ T  SL+ A
Sbjct: 1032 SG----ILPNKITLVSLLYA 1047


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 256/806 (31%), Positives = 417/806 (51%), Gaps = 60/806 (7%)

Query: 87  YALGSVLRACQECGPSGFKFGMQVHCL-----VLKSNQTFDGLVSNVLIAMYGSCLESTD 141
           Y L ++LR C    PS    G+++H       +L +       +   L+ MY       D
Sbjct: 37  YRLLALLRGC--VAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRD 94

Query: 142 CARRIFEEIE---TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
            A  +F  +        + WN +I  ++  G        + +M       S +P+ +T  
Sbjct: 95  -AVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMW--AHPSSPRPDGHTLP 151

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
            ++ +   + L   +L + +    +  GL  D+YVGSAL+  +A  G    AR++F+ M 
Sbjct: 152 YVVKSC--AALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMD 209

Query: 259 QKNVVSMNGLMEGRRK-----------------------------------------GKE 277
           +++ V  N +M+G  K                                         G +
Sbjct: 210 ERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQ 269

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +H   ++ GL   VAV N LV+MYAKC  ++++  +F  M   D V+WN MISG  QNG 
Sbjct: 270 LHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGL 329

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
            ++A+  FC M++ GL   + +L S L +   L     G++IHG  ++     DV + +A
Sbjct: 330 VDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSA 389

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+ +Y     +     VF      D V  +++I  +  +  +   AVK +  +   G  P
Sbjct: 390 LVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNR-MSEAAVKMFRYLLALGIKP 448

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           N V   + L A +S +  ++G ++H  V+K        +E+AL+  Y KCG +D    +F
Sbjct: 449 NAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMF 508

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
           ++MS + DEV+WNSMIS +  N    +A++L   M+  G + ++ T +++LSACA +  +
Sbjct: 509 SKMSAK-DEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAI 567

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGY 637
             G E+H   ++  +  D+   SAL+DMY KCG ++ A R F+ MP +N  SWNS+IS Y
Sbjct: 568 YYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAY 627

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ 697
             HG   +++ L   M+ +G   DHVTF+ ++SAC+HAG V EG + F+ M++ Y + PQ
Sbjct: 628 GAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQ 687

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
           +E  SCMVDL  RAG+LDK  +FI  MP  P++ IW  +L A CR + R  EL   A+  
Sbjct: 688 VEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHA-CRVH-RNVELAEIASQE 745

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           LF+++P N   YVL++N+ A  G+W+ V+K R+ MK+ +V+K  G SWV + +  H+FVA
Sbjct: 746 LFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVA 805

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAG 843
            D++HP+ + IY  LK L  +++  G
Sbjct: 806 ADKNHPDSEEIYMSLKSLIIELKQEG 831



 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 163/569 (28%), Positives = 274/569 (48%), Gaps = 48/569 (8%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +L H      G   D+++ + LI +Y   G L  A ++FD M +R+ V W  ++ GY   
Sbjct: 167 RLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKA 226

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G    A  +F+ M  +G   N   L   L  C     +    G+Q+H L +K     +  
Sbjct: 227 GDVASAVGLFRVMRASGCDPNFATLACFLSVCA--AEADLLSGVQLHTLAVKYGLEPEVA 284

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V+N L++MY  C +  + A R+F  +   DL++WN +IS   Q G      +LF  MQ+ 
Sbjct: 285 VANTLVSMYAKC-QCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKS 343

Query: 185 GFRYSLKPNEYTFGSLITA---------------------AYSSVLSGSYLLQ------- 216
           G    L+P+  T  SL+ A                     A+  V   S L+        
Sbjct: 344 G----LQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRD 399

Query: 217 -QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGL--- 268
            ++   V  A    D+ +GS ++SG+        A K+F  +    I+ N V +      
Sbjct: 400 VRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPA 459

Query: 269 ---MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
              M   R G+E+HGY++++       V + L++MY+KCG +D S  +F  M  KD V+W
Sbjct: 460 CASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTW 519

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N+MIS   QNG  EEA+  F  M  +G+  +N ++ S LS+CA L  I  G++IHG  +K
Sbjct: 520 NSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIK 579

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
             + +D+   +AL+ +Y   G L   L+VF  MPE ++VSWNS+I A+  +  LV E+V 
Sbjct: 580 GPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYG-AHGLVKESVD 638

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV-HAQVIKYNVANETTIENALLSCY 504
               M+  G+  + VTF+ +++A +     + G ++      +Y++  +    + ++  Y
Sbjct: 639 LLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLY 698

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            + G++D   +  A M  + D   W +++
Sbjct: 699 SRAGKLDKAMQFIADMPFKPDAGIWGALL 727



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 136/270 (50%), Gaps = 9/270 (3%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H  I+++    DVFL + L+++Y +  D+  A  +FD     + V  + ++SGY
Sbjct: 366 KQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGY 425

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
               MS  A KMF+ ++  G   N   + S L AC     +  + G ++H  VLK+    
Sbjct: 426 VLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASM--AAMRIGQELHGYVLKNAYEG 483

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V + L+ MY  C    D +  +F ++  +D ++WNS+IS ++Q G+      LF +M
Sbjct: 484 RCYVESALMDMYSKC-GRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQM 542

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             EG +Y    N  T  S+++A     L   Y  ++I  ++ K  + +DL+  SAL+  +
Sbjct: 543 IMEGVKY----NNVTISSILSACAG--LPAIYYGKEIHGIIIKGPIRADLFAESALIDMY 596

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
            + GN   A ++FE M +KN VS N ++  
Sbjct: 597 GKCGNLELALRVFEHMPEKNEVSWNSIISA 626


>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
 gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
          Length = 710

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 228/654 (34%), Positives = 364/654 (55%), Gaps = 69/654 (10%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFD 289
           ++++ + L+  + + G   YARK+F++M ++NV S                         
Sbjct: 58  EVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSF------------------------ 93

Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
                N +++   + G +D+S  +F  M  KD  SWN+MI+G  Q+  +EEA+  F  M 
Sbjct: 94  -----NSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMH 148

Query: 350 RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
           RD  + +++S  S LS+C+ L  + LG QIHG   K     DV + + L+  Y+  G + 
Sbjct: 149 RDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVG 208

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
              +VF  M E + VSWN +I  +  +   + EA++ +  M   G+ P+ VT  ++++A 
Sbjct: 209 CARRVFDGMEEKNVVSWNCLITCYEQNGPAI-EALEAFGRMTELGFKPDEVTLASVVSAC 267

Query: 470 SSFSMGKLGHQVHAQVIKYN-VANETTIENALLSCYGKCGEMDDCEKIFARMSER----- 523
           ++ +  K G Q+HA+V+K +   N+  + NAL+  Y KCG +++   +F RM  R     
Sbjct: 268 ATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSE 327

Query: 524 -------------------------RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
                                    +D VSWN++I+GY  N    +A+ L   + +    
Sbjct: 328 TTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVC 387

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEF------DVVIGSALVDMYSKCGRI 612
             H+TF  +L+A A++A LE G + H+  V+    F      D+ +G++L+DMY KCG +
Sbjct: 388 PTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSV 447

Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
           +   R F+ M  ++  SWN+MI GYA++G+G +AL LF +M   G  PDHVT +G L AC
Sbjct: 448 EEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCAC 507

Query: 673 SHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI 732
           SHAGLV+EG ++F SM++ +GL+P  + ++CMVDLLGRAG L++ ++ I  MP  P++++
Sbjct: 508 SHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVV 567

Query: 733 WRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAM 792
           W ++L AC     R   LG+  A  +FE++P ++  YVLLANMY+  G+W D    RK M
Sbjct: 568 WSSLLSAC--KVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLM 625

Query: 793 KEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVP 846
           +   V K+ GCSW+ ++  VHVF+  D+ HP+K  IY  LK L + MR AGYVP
Sbjct: 626 RRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVP 679



 Score =  238 bits (608), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 170/577 (29%), Positives = 279/577 (48%), Gaps = 84/577 (14%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEM-------------- 46
           S+DA+  H ++++  F  +VF+ N LI+VY + G L  A K+FD M              
Sbjct: 40  SRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIIST 99

Query: 47  -----------------PDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYAL 89
                            P+++  SW  +++G+       EA   F  M R  F+LN Y+ 
Sbjct: 100 LMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSF 159

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
           GS L AC        K G Q+H L+ KS  + D  + + LI  Y  C     CARR+F+ 
Sbjct: 160 GSGLSACSRL--KDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKC-GLVGCARRVFDG 216

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
           +E ++++SWN +I+ Y Q G  I   + F RM   GF    KP+E T  S+++A   + L
Sbjct: 217 MEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGF----KPDEVTLASVVSAC--ATL 270

Query: 210 SGSYLLQQILA-MVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
           +      QI A +VK     +DL +G+ALV  +A+ G    AR +F++M  +N VS   +
Sbjct: 271 AAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTM 330

Query: 269 MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
           + G                             YAK  ++  +RS+F  +  KD VSWN +
Sbjct: 331 VSG-----------------------------YAKSASVKAARSMFATIKQKDIVSWNAL 361

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           I+G  QNG  EEA+  F  ++R+ +  ++++  + L++ A+L  + LG+Q H   +K G 
Sbjct: 362 IAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGF 421

Query: 389 ------DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
                 + D+ V N+L+ +Y   G +   L+VF  M E D VSWN++I  +A +     E
Sbjct: 422 RFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQN-GYGME 480

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN----VANETTIEN 498
           A++ +  M  +G  P+ VT I  L A S   + + G +    + K +    V +  T   
Sbjct: 481 ALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMV 540

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
            LL   G+ G +++ + +   M ++ D V W+S++S 
Sbjct: 541 DLL---GRAGCLEEAKDLIESMPKQPDAVVWSSLLSA 574



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 215/456 (47%), Gaps = 88/456 (19%)

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
           SS F+ +  L  C  L      + +HG  ++     +V + N L+ +Y   GYL    KV
Sbjct: 24  SSPFAKL--LDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKV 81

Query: 415 -------------------------------FFLMPEHDQVSWNSVIGAFADSEALVSEA 443
                                          F LMPE DQ SWNS+I  FA  +    EA
Sbjct: 82  FDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRF-EEA 140

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           + +++ M R  +  N  +F + L+A S     KLG Q+H  + K   + +  + + L+  
Sbjct: 141 LDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDF 200

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           Y KCG +    ++F  M E ++ VSWN +I+ Y  N    +A+     M + G + D  T
Sbjct: 201 YSKCGLVGCARRVFDGM-EEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVT 259

Query: 564 FATVLSACASVATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
            A+V+SACA++A  + G+++HA  V++     D+++G+ALVDMY+KCGR++ A   FD M
Sbjct: 260 LASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRM 319

Query: 623 PVRN-------------------------------VYSWNSMISGYARHGHGDKALTLFS 651
           PVRN                               + SWN++I+GY ++G  ++AL LF 
Sbjct: 320 PVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFR 379

Query: 652 QMKLDGPLPDHVTFVGVLSAC-----------SHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
            +K +   P H TF  +L+A            +H+ +V  GF+ F+S     G  P +  
Sbjct: 380 MLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFR-FQS-----GEEPDIFV 433

Query: 701 FSCMVDLLGRAGELDK----IEEFINKMPITPNSLI 732
            + ++D+  + G +++     E  + K  ++ N++I
Sbjct: 434 GNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMI 469



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 177/375 (47%), Gaps = 54/375 (14%)

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           F  +L         +    VH ++I+     E  I+N L+  YGKCG +D   K+F RMS
Sbjct: 27  FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86

Query: 522 ER------------------------------RDEVSWNSMISGYIHNELLPKAMNLVWF 551
           ER                              +D+ SWNSMI+G+  ++   +A++  WF
Sbjct: 87  ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD--WF 144

Query: 552 M-MQRGQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC 609
           + M R    L+ ++F + LSAC+ +  L+ G ++H    ++    DV +GS L+D YSKC
Sbjct: 145 VRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKC 204

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
           G +  A R FD M  +NV SWN +I+ Y ++G   +AL  F +M   G  PD VT   V+
Sbjct: 205 GLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVV 264

Query: 670 SACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF-------SCMVDLLGRAGELDKIEEFIN 722
           SAC+      EG        Q++  + + ++F       + +VD+  + G +++     +
Sbjct: 265 SACATLAAFKEGV-------QIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFD 317

Query: 723 KMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKW 782
           +MP+  N++   T++    ++   K      A +M   ++ ++ V++  L   Y   G+ 
Sbjct: 318 RMPVR-NAVSETTMVSGYAKSASVKA-----ARSMFATIKQKDIVSWNALIAGYTQNGEN 371

Query: 783 EDVAKARKAMKEAEV 797
           E+     + +K   V
Sbjct: 372 EEALGLFRMLKRESV 386



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 202/431 (46%), Gaps = 66/431 (15%)

Query: 2   KDAKL---FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIV 58
           KD KL    H  I K  ++ DVF+ + LI+ Y + G +  A ++FD M ++N VSW C++
Sbjct: 170 KDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLI 229

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
           + Y   G + EA + F  M   GF  +   L SV+ AC     + FK G+Q+H  V+KS+
Sbjct: 230 TCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATL--AAFKEGVQIHARVVKSD 287

Query: 119 QTFDGLV-SNVLIAMYGSC------------------------------LESTDCARRIF 147
           +  + L+  N L+ MY  C                                S   AR +F
Sbjct: 288 KFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMF 347

Query: 148 EEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS 207
             I+ +D++SWN++I+ Y+Q G+      LF  ++RE    S+ P  YTFG+L+ A  S+
Sbjct: 348 ATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRE----SVCPTHYTFGNLLNA--SA 401

Query: 208 VLSGSYLLQQILAMVKKAGLL------SDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
            L+   L +Q  + V K G         D++VG++L+  + + G+     ++FE M++K+
Sbjct: 402 NLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKD 461

Query: 262 VVSMNGLMEGRRKGK------EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
            VS N ++ G  +        E+   ++ SG         G +   +  G +++ R  F 
Sbjct: 462 HVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFF 521

Query: 316 FMIGKDSV-----SWNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCA 368
            M  +  +      +  M+  L + GC EEA  ++     + D ++ S     S LS+C 
Sbjct: 522 SMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWS-----SLLSACK 576

Query: 369 SLGWIMLGQQI 379
               I LG+ +
Sbjct: 577 VHRNITLGKYV 587



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 44/190 (23%)

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           D   FA +L  C  + +      VH   ++     +V I + L+D+Y KCG +DYA + F
Sbjct: 23  DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82

Query: 620 DLMPVRNVY-------------------------------SWNSMISGYARHGHGDKALT 648
           D M  RNV+                               SWNSMI+G+A+H   ++AL 
Sbjct: 83  DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ----LEQF--S 702
            F +M  D  + +  +F   LSACS         K  K  +Q++GLI +    L+ F  S
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSR-------LKDLKLGAQIHGLISKSKYSLDVFMGS 195

Query: 703 CMVDLLGRAG 712
            ++D   + G
Sbjct: 196 GLIDFYSKCG 205


>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
          Length = 645

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 225/584 (38%), Positives = 329/584 (56%), Gaps = 10/584 (1%)

Query: 355 SSNFSLISTLSSCASLGW-IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
            S+ ++   L S + L   +  G+Q+H   LKL   ++  V  +LLSLYA  G L R  +
Sbjct: 68  PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           VF  MP    V W ++I A+ D+  L  EAV    +    G  P+  T + +L A +  +
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDL-REAVHVARNAFANGMRPDSFTAVRVLTACARIA 186

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
               G  V     +  VA    +  A +  Y KCGEM    ++F +M   +D V+W +M+
Sbjct: 187 DLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKM-RHKDAVAWGAMV 245

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
            GY  N    +A++L   M   G + D +  A  LSAC  +  L+ G +  A  +    E
Sbjct: 246 GGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQ--AIRMVDWDE 303

Query: 594 F--DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFS 651
           F  + V+G+AL+DMY+KCG    A   F  M  +++  WN+MI G    GH   A  L  
Sbjct: 304 FLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVG 363

Query: 652 QMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRA 711
           QM+  G   +  TF+G+L +C+H GL+ +G ++F +M+++Y + P++E + CMVDLL RA
Sbjct: 364 QMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRA 423

Query: 712 GELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVL 771
           G L +  + ++ MP+  N++I   +LG C     R TEL       L  +EP N+ NYV+
Sbjct: 424 GLLQEAHQLVDDMPMPANAVILGALLGGC--KIHRNTELAEHVLKQLILLEPWNSGNYVM 481

Query: 772 LANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEK 831
           L+N+Y++ G+WED AK R  MK   V+K   CSWV  +  VH F  GD+SHP  D IY+K
Sbjct: 482 LSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKK 541

Query: 832 LKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKN 890
           L EL  +M+  GY P T+  +FD+E E KE  + +HSEK+A+AF +L       IR+ KN
Sbjct: 542 LDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKN 601

Query: 891 LRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           LRVC DCH+A K +S+I  REI++RD+NRFH F DG CSC DYW
Sbjct: 602 LRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 645



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 171/388 (44%), Gaps = 4/388 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R G+++H   ++        V   L+++YAKCG +  ++ VF  M    +V W  +I+  
Sbjct: 88  RAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAY 147

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
              G   EA+        +G+   +F+ +  L++CA +  +  G+ +     + G+   V
Sbjct: 148 MDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSV 207

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V+ A + LY   G +++  +VF  M   D V+W +++G +A S     EA+  +L M+ 
Sbjct: 208 FVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYA-SNGHPREALDLFLAMQA 266

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G  P+       L+A +      LG Q    V      +   +  AL+  Y KCG   +
Sbjct: 267 EGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVE 326

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
              +F +M  ++D + WN+MI G         A  LV  M + G +L+  TF  +L +C 
Sbjct: 327 AWVVFQQM-RKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCT 385

Query: 573 SVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSW 630
               ++ G    H       +   +     +VD+ S+ G +  A +  D MP+  N    
Sbjct: 386 HTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVIL 445

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGP 658
            +++ G   H + + A  +  Q+ L  P
Sbjct: 446 GALLGGCKIHRNTELAEHVLKQLILLEP 473



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 164/383 (42%), Gaps = 29/383 (7%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H + LK     +  +  +L+++Y + G L  A ++FDEMP  ++V W  +++ Y   G 
Sbjct: 93  LHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGD 152

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA  + +     G   + +    VL AC     +    G  V     +        V+
Sbjct: 153 LREAVHVARNAFANGMRPDSFTAVRVLTACARI--ADLATGETVWRAAEQEGVAQSVFVA 210

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
              + +Y  C E    AR +F+++  +D ++W +++  Y+  G       LF  MQ EG 
Sbjct: 211 TAAVDLYVKCGEMAK-AREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEG- 268

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              +KP+ Y     ++A   + L    L +Q + MV     L +  +G+AL+  +A+ G+
Sbjct: 269 ---MKPDCYAVAGALSAC--TRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGS 323

Query: 247 FYYARKIFEQMIQKNVVSMNGL-----MEGRRK-GKEVHGYLIRSGLFDMVAVGNGLVNM 300
              A  +F+QM +K+++  N +     M G  K    + G + +SG+        GL+  
Sbjct: 324 TVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCS 383

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
               G I D R  F  M     +S       ++  GC  +       + R GL+     L
Sbjct: 384 CTHTGLIQDGRRYFHNMTKLYHIS-----PRIEHYGCMVD------LLSRAGLLQEAHQL 432

Query: 361 ISTLSSCAS---LGWIMLGQQIH 380
           +  +   A+   LG ++ G +IH
Sbjct: 433 VDDMPMPANAVILGALLGGCKIH 455


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 240/719 (33%), Positives = 392/719 (54%), Gaps = 16/719 (2%)

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLMEG------RRKGKE 277
           L +  V +A+++GF R        ++F  M    I+ N  +    ++          G E
Sbjct: 107 LPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGME 166

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           +    +R G    + VG+ +VN   K G + D++ VF  M  KD V WN++I G  Q G 
Sbjct: 167 IIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGL 226

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
           + E+I  F  M   GL  S  ++ + L +C   G   +G   H   L LG+ +DV V  +
Sbjct: 227 FWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTS 286

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+ +Y++ G       VF  M     +SWN++I  +  +  ++ E+   +  + ++G   
Sbjct: 287 LVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQN-GMIPESYALFRRLVQSGSGF 345

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
           +  T ++++   S  S  + G  +H+ +I+  + +   +  A++  Y KCG +     +F
Sbjct: 346 DSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVF 405

Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
            RM  +++ ++W +M+ G   N     A+ L   M +     +  T  +++  CA + +L
Sbjct: 406 GRMG-KKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSL 464

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD-LMPVRNVYSWNSMISG 636
            +G  VHA  +R    FD VI SAL+DMY+KCG+I  A + F+    +++V   NSMI G
Sbjct: 465 TKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMG 524

Query: 637 YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP 696
           Y  HGHG  AL ++S+M  +   P+  TFV +L+ACSH+GLV+EG   F SM + + + P
Sbjct: 525 YGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRP 584

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAAN 756
           Q + ++C+VDL  RAG L++ +E + +MP  P++ +   +L   CR + + T +G + A+
Sbjct: 585 QHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSG-CRTH-KNTNMGIQIAD 642

Query: 757 MLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFV 816
            L  ++  N+  YV+L+N+YA   KWE V   R  M+   +KK  G S + + + V+ F 
Sbjct: 643 RLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFF 702

Query: 817 AGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF- 875
           A D+SHP    IY+ L+ L  ++   GY+P T   L D+    K  L+  HSE++A+AF 
Sbjct: 703 ASDDSHPSWADIYQLLENLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFG 762

Query: 876 VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +L+      I+I KNLRVC DCH+  K+ISKIV REI++RD+NRFHHF +GKCSC D+W
Sbjct: 763 LLSTPCGSLIKITKNLRVCVDCHNVTKYISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 147/556 (26%), Positives = 264/556 (47%), Gaps = 46/556 (8%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           K +H  +I++ +     +   L+ +Y+  G +  +R+VF      ++   N MI+G  +N
Sbjct: 64  KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
             + E    F  M    +  ++++ +  L +C  L    +G +I    ++ G    + V 
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           +++++     GYL+   KVF  MPE D V WNS+IG +   + L  E+++ +L+M   G 
Sbjct: 184 SSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQ-KGLFWESIQMFLEMIGGGL 242

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            P+ VT  N+L A     + K+G   H+ V+   + N+  +  +L+  Y   G+      
Sbjct: 243 RPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAAL 302

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F  M  R   +SWN+MISGY+ N ++P++  L   ++Q G   D  T  +++  C+  +
Sbjct: 303 VFDSMCSR-SLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTS 361

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            LE G  +H+C +R  LE  +V+ +A+VDMYSKCG I  A+  F  M  +NV +W +M+ 
Sbjct: 362 DLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLV 421

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG---FKHFKSMSQVY 692
           G +++G+ + AL LF QM+ +    + VT V ++  C+H G + +G     HF      +
Sbjct: 422 GLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAF 481

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFIN-----KMPITPNSLIW--------RTVLGA 739
             +      S ++D+  + G++   E+  N     K  I  NS+I         R  LG 
Sbjct: 482 DAVIT----SALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGV 537

Query: 740 CCR-----------------ANCRKTELGRKAANMLFEME------PQNAVNYVLLANMY 776
             R                   C  + L  +   +   ME      PQ+  +Y  L +++
Sbjct: 538 YSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHK-HYACLVDLH 596

Query: 777 ASGGKWEDVAKARKAM 792
           +  G+ E+  +  K M
Sbjct: 597 SRAGRLEEADELVKQM 612



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 141/587 (24%), Positives = 260/587 (44%), Gaps = 79/587 (13%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H QI+K+  + + FL   LI VY  +G L  A  +FD+     +     +++G+   
Sbjct: 64  KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQ---------ECGPSGFKFGMQVHCLVL 115
               E  ++F+ M      +N Y     L+AC          E   +  + G  +H  V 
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183

Query: 116 KSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVF 175
            S   F  LV    +A           A+++F+ +  +D++ WNSII  Y Q+G      
Sbjct: 184 SSMVNF--LVKRGYLAD----------AQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESI 231

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLS--GSYLLQQILAMVKKAGLLSDLYV 233
           ++F  M   G R    P+  T  +L+ A   S L   G      +LA+    G+ +D++V
Sbjct: 232 QMFLEMIGGGLR----PSPVTMANLLKACGQSGLKKVGMCAHSYVLAL----GMGNDVFV 283

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--------------RR------ 273
            ++LV  ++ LG+   A  +F+ M  ++++S N ++ G              RR      
Sbjct: 284 LTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGS 343

Query: 274 ---------------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
                                 G+ +H  +IR  L   + +   +V+MY+KCG I  +  
Sbjct: 344 GFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATI 403

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           VF  M  K+ ++W  M+ GL QNG  E+A+  FC M+ + + +++ +L+S +  CA LG 
Sbjct: 404 VFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGS 463

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF---FLMPEHDQVSWNSV 429
           +  G+ +H   ++ G   D  +++AL+ +YA  G +    K+F   F +   D +  NS+
Sbjct: 464 LTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLK--DVILCNSM 521

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV-HAQVIKY 488
           I  +         A+  Y  M      PN  TF+++L A S   + + G  + H+    +
Sbjct: 522 IMGYG-MHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDH 580

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           +V  +      L+  + + G +++ +++  +M  +       +++SG
Sbjct: 581 DVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSG 627



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 137/310 (44%), Gaps = 17/310 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ ++ H  I++      + L   ++++Y + G +  A+ +F  M  +N ++W  ++ G 
Sbjct: 364 ENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGL 423

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +  G + +A K+F +M       N   L S++  C   G      G  VH   ++    F
Sbjct: 424 SQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLG--SLTKGRTVHAHFIRHGYAF 481

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D ++++ LI MY  C +     +    E   +D+I  NS+I  Y   G       ++SRM
Sbjct: 482 DAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRM 541

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
             E     LKPN+ TF SL+TA   S  V  G  L     +M +   +       + LV 
Sbjct: 542 IEE----RLKPNQTTFVSLLTACSHSGLVEEGKALFH---SMERDHDVRPQHKHYACLVD 594

Query: 240 GFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG- 296
             +R G    A ++ +QM  Q +   +  L+ G R  K  + G  I   L  +  + +G 
Sbjct: 595 LHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGI 654

Query: 297 ---LVNMYAK 303
              L N+YA+
Sbjct: 655 YVMLSNIYAE 664


>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
          Length = 647

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/540 (38%), Positives = 320/540 (59%), Gaps = 5/540 (0%)

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           N L+  Y   G L    K+F  MP  +  +WN+++    +S  L  E++ ++  MRR G 
Sbjct: 112 NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNS-GLNEESLGFFFAMRREGM 170

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            P+     ++    +       G QVHA V++  +  +  + ++L   Y +CG + D E 
Sbjct: 171 QPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEA 230

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
              R     + VS N+ ISG   N     A+     M   G   +  TF + +++C+ +A
Sbjct: 231 AL-RALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLA 289

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            L +G ++HA  ++  ++  V + ++LV MYS+CG +  + R        ++   ++MIS
Sbjct: 290 ALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMIS 349

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
            Y  HGHG KA+ LF QM   G  P+ VTF+ +L ACSH+GL DEG   F+ M++ YGL 
Sbjct: 350 AYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQ 409

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           P ++ ++C+VDLLGR+G L++ E+ I  MP+ P+ +IW+T+L AC     +K ++  + A
Sbjct: 410 PSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSAC--KTQKKFDMAERIA 467

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
             + E++P ++ +YVLL+N+ A+  +WEDV+K R+ M+E  V+KE G SWV +K  +H F
Sbjct: 468 ERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQF 527

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
             GDESH  +  I E L+E+  ++R  GY P       D+E E KE  +++HSEK+A+AF
Sbjct: 528 CTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAF 587

Query: 876 V-LTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             L+    +PIR+MKNLRVC DCH A K +SK++GREIV+RD +RFHHF DGKCSCGDYW
Sbjct: 588 AFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 205/426 (48%), Gaps = 35/426 (8%)

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR 273
           LL+Q+ A    +G  +D +  + L+  +A LG+F  AR +FE++ ++NV+S N L+ G  
Sbjct: 60  LLRQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGG-- 117

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
                                      Y K G ++ +R +F  M  ++  +WN M++GL 
Sbjct: 118 ---------------------------YVKNGDLETARKLFDEMPARNVATWNAMVAGLT 150

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            +G  EE++  F AMRR+G+    + L S    CA L  ++ G+Q+H   ++ GLD D+ 
Sbjct: 151 NSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMC 210

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI-GAFADSEALVSEAVKYYLDMRR 452
           V ++L  +Y   G+L         +P  + VS N+ I G   + +A    A++++  MR 
Sbjct: 211 VGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDA--EGALEFFCLMRG 268

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           AG   N VTF++ + + S  +    G Q+HA  IK  V     +  +L+  Y +CG + D
Sbjct: 269 AGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGD 328

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
            E++    S   D V  ++MIS Y  +    KA+ L   MM  G   +  TF T+L AC+
Sbjct: 329 SERVCLEYSG-TDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACS 387

Query: 573 SVATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSW 630
                + GM       +   L+  V   + +VD+  + G ++ A      MPV+ +   W
Sbjct: 388 HSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIW 447

Query: 631 NSMISG 636
            +++S 
Sbjct: 448 KTLLSA 453



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 212/470 (45%), Gaps = 57/470 (12%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N LI  YV+ GDL +A KLFDEMP RN  +W  +V+G T+ G++ E+   F  M R G  
Sbjct: 112 NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 171

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC--LESTD 141
            + Y LGS+ R C   G      G QVH  V++S    D  V + L  MY  C  L   +
Sbjct: 172 PDEYGLGSLFRCCA--GLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGE 229

Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
            A R    +   +++S N+ IS  +Q GD     + F  M+  G    ++ N  TF S +
Sbjct: 230 AALRALPSL---NIVSCNTTISGRTQNGDAEGALEFFCLMRGAG----VEANAVTFVSAV 282

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
           T+   S L+     QQI A+  K G+   + V ++LV  ++R G    + ++  +    +
Sbjct: 283 TSC--SDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTD 340

Query: 262 VVSMNGLMEGRRKGKEVHGYLIRS-GLF-DMVAVG------NGLVNMYA--KCGTIDDSR 311
           +V  + ++         HG+  ++ GLF  M+A G        L  +YA    G  D+  
Sbjct: 341 LVLCSAMI----SAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGM 396

Query: 312 SVFRFMIG----KDSVS-WNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTL 364
           + F  M      + SV  +  ++  L ++GC  EA  ++    ++ DG++         L
Sbjct: 397 NCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTL-----L 451

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLKVFFLMPEHD- 422
           S+C +     + ++I    ++  LD   S S  LLS + A +       KV   M E + 
Sbjct: 452 SACKTQKKFDMAERIAERVIE--LDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNV 509

Query: 423 ----QVSWNSVIGAFA------DSEALVSEAVKYYLDM----RRAGWSPN 458
                VSW  + G         +S +   E V+   +M    R+ G++P+
Sbjct: 510 RKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPD 559



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 136/314 (43%), Gaps = 39/314 (12%)

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           S   V EA+  +   R   WS  G+ F +I  A  +  + +   Q+HA       A +  
Sbjct: 25  STGRVKEAL--HRRFREGLWSEPGL-FSHIFRACQALPLLR---QLHAFAATSGAAADRF 78

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNL------- 548
             N LL  Y   G+      +F R+  +R+ +SWN +I GY+ N  L  A  L       
Sbjct: 79  TANHLLLAYADLGDFPTARGLFERIP-KRNVMSWNILIGGYVKNGDLETARKLFDEMPAR 137

Query: 549 ---VW--------------------FMMQR-GQRLDHFTFATVLSACASVATLERGMEVH 584
               W                    F M+R G + D +   ++   CA +  +  G +VH
Sbjct: 138 NVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVH 197

Query: 585 ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGD 644
           A  VR+ L+ D+ +GS+L  MY +CG +         +P  N+ S N+ ISG  ++G  +
Sbjct: 198 AYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAE 257

Query: 645 KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCM 704
            AL  F  M+  G   + VTFV  +++CS    + +G +   +++   G+   +   + +
Sbjct: 258 GALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQG-QQIHALAIKTGVDKVVPVMTSL 316

Query: 705 VDLLGRAGELDKIE 718
           V +  R G L   E
Sbjct: 317 VHMYSRCGCLGDSE 330



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 111/271 (40%), Gaps = 9/271 (3%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  +++ G   D+ + ++L ++Y+R G L         +P  N VS    +SG T  G +
Sbjct: 197 HAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDA 256

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
             A + F  M  AG   N     S + +C +   +    G Q+H L +K+       V  
Sbjct: 257 EGALEFFCLMRGAGVEANAVTFVSAVTSCSDL--AALAQGQQIHALAIKTGVDKVVPVMT 314

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY  C    D + R+  E    DL+  +++IS Y   G       LF +M   G  
Sbjct: 315 SLVHMYSRCGCLGD-SERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAG-- 371

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
              +PNE TF +L+ A   S L     +     M K  GL   +   + +V    R G  
Sbjct: 372 --AEPNEVTFLTLLYACSHSGLKDEG-MNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCL 428

Query: 248 YYARKIFEQM-IQKNVVSMNGLMEGRRKGKE 277
             A  +   M +Q + V    L+   +  K+
Sbjct: 429 NEAEDLILSMPVQPDGVIWKTLLSACKTQKK 459


>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
 gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 687

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 227/679 (33%), Positives = 374/679 (55%), Gaps = 69/679 (10%)

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGK 276
           ++ A + K+   S+ ++ + L+  + + G    ARK+F++M+++N+ S N +        
Sbjct: 40  RVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSI-------- 91

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
                                +  + K G +DD+  +F  M   D  SWN+MISG +Q+G
Sbjct: 92  ---------------------ICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHG 130

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
            ++EA++ F  M   G + + +S  S LS+CA L  + LG QIH    +    SDV + +
Sbjct: 131 RFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGS 190

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           AL+ +Y+  G +     VF  M    +VSWNS+I  + +    V EA+K +++M + G  
Sbjct: 191 ALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCY-EQNGPVDEALKIFVEMIKCGVE 249

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYN-VANETTIENALLSCYGKCGEMDDCEK 515
           P+ VT  ++++A ++ S  K G Q+HA+V+K +   N+  + NALL  Y KC  +++   
Sbjct: 250 PDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARI 309

Query: 516 IFARMSER------------------------------RDEVSWNSMISGYIHNELLPKA 545
           IF  M  R                              +D ++WN++I+G   N    +A
Sbjct: 310 IFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEA 369

Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF------DVVIG 599
           + L   + +      H+TF  +L+ACA++A L+ G + H+  ++    F      DV +G
Sbjct: 370 LILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVG 429

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           ++L+DMY KCG ++   R F  M  ++  SWN+MI GYA++G G+KAL +F +M   G  
Sbjct: 430 NSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEA 489

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           PDHVT +GVL ACSHAGL+DEG  +F+SM+  +GL+P  + ++CMVDLLGRAG L++ + 
Sbjct: 490 PDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKN 549

Query: 720 FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASG 779
            I +M + P++++W ++L AC     R  +LG      L E++P+N+  YVLL+NMYA  
Sbjct: 550 LIEEMSMQPDAIVWGSLLAAC--KVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAEN 607

Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
             W++V + RK M++  V K+ GCSW+ ++  ++VF+  D+ H  K  IY  L+ + Q+M
Sbjct: 608 RDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQM 667

Query: 840 RDAGYVPQTKFALFDLEPE 858
           + AGYVP      FD + E
Sbjct: 668 KQAGYVPYVGSNEFDEDEE 686



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 165/574 (28%), Positives = 279/574 (48%), Gaps = 78/574 (13%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           ++D    H  I+K  FA + F+ N LI+VY + G +  A KLFD M +RN  SW  I+  
Sbjct: 35  ARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICA 94

Query: 61  YTHKGMSNEACKMFKEMVRA-------------------------------GFLLNRYAL 89
           +T  G  ++A  +F++M +                                GFL+N Y+ 
Sbjct: 95  FTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSF 154

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
           GS L AC   G    K G Q+H LV +SN   D  + + L+ MY  C    + A+ +F+E
Sbjct: 155 GSALSAC--AGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKC-GRVEYAQSVFDE 211

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
           +  R  +SWNS+I+ Y Q G      K+F  M + G    ++P+E T  S+++A   + +
Sbjct: 212 MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCG----VEPDEVTLASVVSAC--ATI 265

Query: 210 SGSYLLQQILAMVKKAG-LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL 268
           S     QQI A V K     +DL +G+AL+  +A+      AR IF+ M  ++VVS   +
Sbjct: 266 SAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSM 325

Query: 269 MEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
           + G                             YAK   +  +R +F  M+ KD ++WN +
Sbjct: 326 VSG-----------------------------YAKASKVKVARYMFSNMMVKDVITWNAL 356

Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
           I+G  QNG  EEA++ F  ++R+ +  ++++  + L++CA+L  + LG+Q H   LK G 
Sbjct: 357 IAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGF 416

Query: 389 ------DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
                 DSDV V N+L+ +Y   G +    +VF  M E D VSWN++I  +A +    ++
Sbjct: 417 RFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQN-GFGNK 475

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALL 501
           A++ +  M  +G +P+ VT I +L A S   +   G +   +   ++ +         ++
Sbjct: 476 ALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMV 535

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
              G+ G +++ + +   MS + D + W S+++ 
Sbjct: 536 DLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAA 569



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 48/215 (22%)

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
           LD   F+ +L+ CA   +      VHAC +++    +  I + L+D+Y KCG +D A + 
Sbjct: 17  LDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKL 76

Query: 619 FDLMPVRNVYSW-------------------------------NSMISGYARHGHGDKAL 647
           FD M  RN++SW                               NSMISG+ +HG  D+AL
Sbjct: 77  FDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEAL 136

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF------ 701
             F+QM   G L +  +F   LSAC+       G +  K  SQ++ L+ +          
Sbjct: 137 VYFAQMHGHGFLVNEYSFGSALSACA-------GLQDLKLGSQIHSLVYRSNYLSDVYMG 189

Query: 702 SCMVDLLGRAGELDKIEEFINKMPITP----NSLI 732
           S +VD+  + G ++  +   ++M +      NSLI
Sbjct: 190 SALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLI 224


>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 211/510 (41%), Positives = 310/510 (60%), Gaps = 7/510 (1%)

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
           NS+I  + DS   +  +V  Y  M + G  P+  TF  +L + +     +LG  +H  +I
Sbjct: 111 NSMIRCYTDSNKHL-HSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCII 169

Query: 487 KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAM 546
           +    +   +  AL++ YG C  + D  ++F  + +R + VSWN++I+GY HN +  K +
Sbjct: 170 QMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDR-NIVSWNALITGYNHNRMFRKVI 228

Query: 547 NLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMY 606
           ++   M   G +    T   VL ACA +  L +G  +        L  +V +G+AL+DMY
Sbjct: 229 DVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMY 288

Query: 607 SKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFV 666
           +KCG +D A + F  M V+NVY+WN +ISGYA +G G+ AL  FS+M ++   PD VTF+
Sbjct: 289 AKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFL 348

Query: 667 GVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPI 726
           GVL AC H GLV+EG  +F SM + +GL P++E + CMVDLLGRAG LD+ ++ I  M +
Sbjct: 349 GVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSM 408

Query: 727 TPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDV 785
            P+ +IWR +LGAC    N    +LG  A   L E+EP N  NYVLLAN+YA   +W+ V
Sbjct: 409 QPDPIIWRELLGACRIHGN---IQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKV 465

Query: 786 AKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
            + R+ M    V+K  GCS + + + V+ FV  +   P  + +Y+ L ++N+K++ AGYV
Sbjct: 466 GEVREMMDCRRVRKVPGCSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYV 525

Query: 846 PQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRN-SKLPIRIMKNLRVCGDCHSAFKFI 904
             T  A +D+E E KE  + YHSEK+A+AF L ++ S L +RI+KNLR+C DCH  FK +
Sbjct: 526 ADTGMASYDIEEEEKEHSLMYHSEKLALAFGLLKSPSGLTLRIVKNLRICQDCHGFFKIV 585

Query: 905 SKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           SK+  R+I +RD NRFHHF  G CSC DYW
Sbjct: 586 SKVYRRDISVRDRNRFHHFVGGACSCKDYW 615



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 149/328 (45%), Gaps = 12/328 (3%)

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           DS   N+MI     +  +  ++  +  M ++G+   + +  + L S A L    LG+ IH
Sbjct: 106 DSDLCNSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIH 165

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
              +++G +S+V VS AL+++Y     +S   +VF  +P+ + VSWN++I  + +   + 
Sbjct: 166 CCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGY-NHNRMF 224

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
            + +  + +M+ AG  P  VT + +L A +       G  +   +    +     +  AL
Sbjct: 225 RKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTAL 284

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD 560
           +  Y KCG +D+ EKIF  M   ++  +WN +ISGY  N     A+     M+    + D
Sbjct: 285 IDMYAKCGVVDEAEKIFKAM-RVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPD 343

Query: 561 HFTFATVLSACASVATLERGMEVHAC-----GVRACLEFDVVIGSALVDMYSKCGRIDYA 615
             TF  VL AC     +  G           G+R  +E        +VD+  + G +D A
Sbjct: 344 EVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEH----YGCMVDLLGRAGFLDEA 399

Query: 616 SRFFDLMPVR-NVYSWNSMISGYARHGH 642
            +    M ++ +   W  ++     HG+
Sbjct: 400 QQLIQAMSMQPDPIIWRELLGACRIHGN 427



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 7/200 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  I++ GF  +V++   L+N+Y     ++ A ++FDE+PDRN VSW  +++GY H
Sbjct: 161 GKAIHCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNH 220

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
             M  +   +F+EM  AG       +  VL AC   G      G  +   +  +    + 
Sbjct: 221 NRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLG--ALNQGRWIDDYIDHNRLRLNV 278

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V   LI MY  C    D A +IF+ +  +++ +WN +IS Y+  G   S  + FSRM  
Sbjct: 279 FVGTALIDMYAKC-GVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIM 337

Query: 184 EGFRYSLKPNEYTFGSLITA 203
           E F    KP+E TF  ++ A
Sbjct: 338 EKF----KPDEVTFLGVLCA 353



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 4/261 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK +H  +I+ G    V V   LVNMY  C ++ D+R VF  +  ++ VSWN +I+G + 
Sbjct: 161 GKAIHCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNH 220

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N  + + I  F  M+  G      +++  L +CA LG +  G+ I        L  +V V
Sbjct: 221 NRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFV 280

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             AL+ +YA  G +    K+F  M   +  +WN +I  +A        A++ +  M    
Sbjct: 281 GTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYA-MNGRGESALQAFSRMIMEK 339

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDD 512
           + P+ VTF+ +L A     +   G + +   +K        IE+   ++   G+ G +D+
Sbjct: 340 FKPDEVTFLGVLCACCHQGLVNEG-RTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDE 398

Query: 513 CEKIFARMSERRDEVSWNSMI 533
            +++   MS + D + W  ++
Sbjct: 399 AQQLIQAMSMQPDPIIWRELL 419



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 136/317 (42%), Gaps = 49/317 (15%)

Query: 159 NSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQI 218
           NS+I  Y+     +    ++++M + G    + P+  TF +++ +   + L    L + I
Sbjct: 111 NSMIRCYTDSNKHLHSVFIYTQMWKNG----IFPDSSTFPTVLKSV--AQLCRQELGKAI 164

Query: 219 LAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR----- 273
              + + G  S++YV +ALV+ +    +   AR++F+++  +N+VS N L+ G       
Sbjct: 165 HCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMF 224

Query: 274 ------------------------------------KGKEVHGYLIRSGLFDMVAVGNGL 297
                                               +G+ +  Y+  + L   V VG  L
Sbjct: 225 RKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTAL 284

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           ++MYAKCG +D++  +F+ M  K+  +WN +ISG   NG  E A+  F  M  +      
Sbjct: 285 IDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDE 344

Query: 358 FSLISTLSSCASLGWIMLGQQ-IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
            + +  L +C   G +  G+        + GL   +     ++ L   AG+L    ++  
Sbjct: 345 VTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQ 404

Query: 417 LMP-EHDQVSWNSVIGA 432
            M  + D + W  ++GA
Sbjct: 405 AMSMQPDPIIWRELLGA 421



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 13/217 (5%)

Query: 57  IVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRA-CQECGPSGFKFGMQVHCLVL 115
           ++  YT       +  ++ +M + G   +     +VL++  Q C     + G  +HC ++
Sbjct: 113 MIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQ---ELGKAIHCCII 169

Query: 116 KSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVF 175
           +     +  VS  L+ MYG+C   +D AR++F+EI  R+++SWN++I+ Y+       V 
Sbjct: 170 QMGFESNVYVSTALVNMYGTCSSVSD-ARQVFDEIPDRNIVSWNALITGYNHNRMFRKVI 228

Query: 176 KLFSRMQREGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVG 234
            +F  MQ  G     KP E T  G L+  A+   L+     + I   +    L  +++VG
Sbjct: 229 DVFREMQIAG----AKPVEVTMVGVLLACAHLGALNQG---RWIDDYIDHNRLRLNVFVG 281

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           +AL+  +A+ G    A KIF+ M  KNV + N L+ G
Sbjct: 282 TALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISG 318



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 38/78 (48%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +VF+   LI++Y + G +  A K+F  M  +N  +W  ++SGY   G    A + F  M+
Sbjct: 277 NVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMI 336

Query: 79  RAGFLLNRYALGSVLRAC 96
              F  +      VL AC
Sbjct: 337 MEKFKPDEVTFLGVLCAC 354


>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 236/663 (35%), Positives = 367/663 (55%), Gaps = 48/663 (7%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           ++H  +    LF    V   L++      ++D + S+FR     +   +N +I GL +N 
Sbjct: 58  QIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENS 117

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
            +E ++ +F  M R  +     +L   L S A+L  + LG+ +HG  +KLGL+ D  V  
Sbjct: 118 RFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRV 177

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVS----WNSVIGAFADSEALVSEAVKYYLDMRR 452
           +L+ +Y   G L   L++F   P+ ++      WN +I                      
Sbjct: 178 SLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLI---------------------- 215

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
                NG   +  L+ A+S         +   + + N  +     N+L++ + + G++D 
Sbjct: 216 -----NGCCKVGDLSKAAS---------LFEAMPERNAGSW----NSLINGFVRNGDLDR 257

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
             ++F +M E+ + VSW +MI+G+  N    KA+++ W M++ G R +  T  + L AC 
Sbjct: 258 ARELFVQMPEK-NVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACT 316

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
            +  L+ G  +H        + +  IG+ALVDMY+KCG I  ASR F     +++ +W+ 
Sbjct: 317 KIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSV 376

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           MI G+A HG  D+AL  F +MK  G  PD V F+ +L+ACSH+G VD+G   F+SM   Y
Sbjct: 377 MIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDY 436

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
            + P ++ ++ +VDLLGRAG LD+   FI  MPI P+ +IW  +  A CRA+ +  E+  
Sbjct: 437 SIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCA-CRAH-KNIEMAE 494

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
             A  L ++EP++  +YV L+N+YA+ G+WEDV + R  MK   V+K+ G S++ ++  V
Sbjct: 495 LTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQV 554

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
           H FVAGD +H   + I  KL+E+    +  GY+P+T + L ++E E KED +  HSEK+A
Sbjct: 555 HSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLA 614

Query: 873 VAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
           +AF L   +    IRI+KNLRVCGDCHS  K+ SK+  REI+LRD  RFHHF DG CSCG
Sbjct: 615 LAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCG 674

Query: 932 DYW 934
           DYW
Sbjct: 675 DYW 677



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 209/438 (47%), Gaps = 29/438 (6%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSC-LESTDCARRIFEEIETRDLISWNSIISVYSQ 167
           Q+H  +   N   +  V   LI+   SC L+S D A  IF   +  +L  +N++I   ++
Sbjct: 58  QIHAQIFLHNLFSNSRVVTQLIS--SSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAE 115

Query: 168 RG---DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
                 ++S F L         R S++P+  T   ++ +  + V  G  L + +   V K
Sbjct: 116 NSRFEGSVSHFVLM-------LRLSIRPDRLTLPFVLKSVAALVDVG--LGRCLHGGVMK 166

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN----VVSMNGLMEGRRKGKEVHG 280
            GL  D +V  +LV  + ++G   +  ++F++  Q+N    ++  N L+ G  K  ++  
Sbjct: 167 LGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSK 226

Query: 281 YLIRSGLFDMVAVGNG-----LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
               + LF+ +   N      L+N + + G +D +R +F  M  K+ VSW TMI+G  QN
Sbjct: 227 A---ASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQN 283

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G +E+A+  F  M  +G+  ++ +++S L +C  +G + +G++IH      G   +  + 
Sbjct: 284 GDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIG 343

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
            AL+ +YA  G +    +VF      D ++W+ +I  +A       +A++ ++ M+ AG 
Sbjct: 344 TALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWA-IHGCFDQALQCFVKMKSAGI 402

Query: 456 SPNGVTFINILAAAS-SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
           +P+ V F+ IL A S S ++ +  +   +  + Y++         ++   G+ G +D+  
Sbjct: 403 NPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEAL 462

Query: 515 KIFARMSERRDEVSWNSM 532
                M    D V W ++
Sbjct: 463 SFIQSMPINPDFVIWGAL 480



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 12/207 (5%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           SK A LF     ++  ++     N+LIN +VR GDL  A +LF +MP++N VSW  +++G
Sbjct: 225 SKAASLFEAMPERNAGSW-----NSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMING 279

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           ++  G   +A  MF  M+  G   N   + S L AC + G    + G ++H  +  +   
Sbjct: 280 FSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIG--ALQVGERIHNYLSSNGFQ 337

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            +  +   L+ MY  C  +   A R+F E + +DL++W+ +I  ++  G      + F +
Sbjct: 338 LNRGIGTALVDMYAKC-GNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVK 396

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSS 207
           M+  G    + P+E  F +++TA   S
Sbjct: 397 MKSAG----INPDEVIFLAILTACSHS 419



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 122/272 (44%), Gaps = 52/272 (19%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVS----WACIVS 59
            +  H  ++K G  +D F+  +L+++YV++G+L    +LFDE P RN       W  +++
Sbjct: 157 GRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLIN 216

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           G    G  ++A  +F+ M        R A GS                          N 
Sbjct: 217 GCCKVGDLSKAASLFEAMPE------RNA-GSW-------------------------NS 244

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             +G V N             D AR +F ++  ++++SW ++I+ +SQ GD      +F 
Sbjct: 245 LINGFVRN----------GDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFW 294

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           RM  EG R    PN+ T  S + A   + +    + ++I   +   G   +  +G+ALV 
Sbjct: 295 RMLEEGVR----PNDLTVVSALLAC--TKIGALQVGERIHNYLSSNGFQLNRGIGTALVD 348

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
            +A+ GN   A ++F +   K++++ + ++ G
Sbjct: 349 MYAKCGNIKSASRVFVETKGKDLLTWSVMIWG 380



 Score = 47.8 bits (112), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 50/94 (53%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +  +GF  +  +   L+++Y + G++ SAS++F E   ++ ++W+ ++ G+   G 
Sbjct: 327 IHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGC 386

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            ++A + F +M  AG   +     ++L AC   G
Sbjct: 387 FDQALQCFVKMKSAGINPDEVIFLAILTACSHSG 420


>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 840

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 231/598 (38%), Positives = 345/598 (57%), Gaps = 30/598 (5%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           + L+ C +      GQ++H   +K      V +   L+ LY     L     VF  MPE 
Sbjct: 248 AILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPER 307

Query: 422 DQVSWNSVIGAFAD----SEAL--------VSEAVKYYLDMRRAG-----W---SPNGVT 461
           + VSW ++I A++     S+AL        +S    Y +D  +       W    PN  T
Sbjct: 308 NVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFT 367

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           F  +L + +S     LG Q+H+ +IK N  +   + ++LL  Y K G++ +   +F  + 
Sbjct: 368 FATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLP 427

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
           ER D VS  ++ISGY    L  +A+ L   +   G + ++ T+  VL+A + +A L+ G 
Sbjct: 428 ER-DVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGK 486

Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
           +VH   +R+ +   VV+ ++L+DMYSKCG + Y+ R FD M  R V SWN+M+ GY++HG
Sbjct: 487 QVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHG 546

Query: 642 HGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI---PQ 697
            G + L LF+ M+ +  + PD VT + VLS CSH GL D+G   F  MS   G I   P+
Sbjct: 547 EGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSS--GKIEVEPK 604

Query: 698 LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANM 757
           +E + C+VDLLGR+G +++  EFI KMP  P + IW ++LGAC R +    ++G  A   
Sbjct: 605 MEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGAC-RVHS-NVDIGEFAGQQ 662

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           L E+EP NA NYV+L+N+YAS G+WEDV+  R  M +  V KE G S + +   +H F A
Sbjct: 663 LLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHA 722

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-V 876
            D SHP ++ I  K+KEL+   ++ GYVP     L D++ E KE ++  HSEK+A++F +
Sbjct: 723 SDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGL 782

Query: 877 LTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +   + +PIR++KNLR+C DCH+  K+ISK+ GRE+ LRD NRFH    GKCSC DYW
Sbjct: 783 IASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 193/398 (48%), Gaps = 29/398 (7%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R+G+ VH ++I++     V +   L+ +Y KC ++ D+ +VF  M  ++ VSW  MIS  
Sbjct: 260 REGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAY 319

Query: 333 DQNGCYEEAIMNFCAMRR---------DGLMSSN------------FSLISTLSSC-ASL 370
            Q G   +A+  F A  +         D L  SN            F+  + L+SC +SL
Sbjct: 320 SQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSL 379

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
           G+I LG+QIH   +KL  +  V V ++LL +YA  G +     VF  +PE D VS  ++I
Sbjct: 380 GFI-LGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAII 438

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
             +A    L  EA++ +  ++  G   N VT+  +L A S  +   LG QVH  V++  +
Sbjct: 439 SGYAQL-GLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEI 497

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
            +   ++N+L+  Y KCG +    +IF  M E R  +SWN+M+ GY  +    + + L  
Sbjct: 498 PSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYE-RTVISWNAMLVGYSKHGEGREVLKLFT 556

Query: 551 FMMQRGQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG--SALVDMYS 607
            M +  + + D  T   VLS C+     ++G+ +        +E +  +     +VD+  
Sbjct: 557 LMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLG 616

Query: 608 KCGRIDYASRFFDLMPVRNVYS-WNSMISGYARHGHGD 644
           + GR++ A  F   MP     + W S++     H + D
Sbjct: 617 RSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVD 654



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 152/301 (50%), Gaps = 33/301 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H  ++K  +   VFL   LI +Y +   L  A  +FDEMP+RN VSW  ++S Y
Sbjct: 260 REGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAY 319

Query: 62  THKGMSNEACKMFKEMVRAGFL---------------------LNRYALGSVLRACQECG 100
           + +G +++A  +F   V+                          N +   +VL +C    
Sbjct: 320 SQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCT--S 377

Query: 101 PSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNS 160
             GF  G Q+H L++K N      V + L+ MY    +  + AR +FE +  RD++S  +
Sbjct: 378 SLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHE-ARTVFECLPERDVVSCTA 436

Query: 161 IISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILA 220
           IIS Y+Q G      +LF R+Q EG    +K N  T+  ++TA   S L+   L +Q+  
Sbjct: 437 IISGYAQLGLDEEALELFRRLQGEG----MKSNYVTYTGVLTAL--SGLAALDLGKQVHN 490

Query: 221 MVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---GKE 277
            V ++ + S + + ++L+  +++ GN  Y+R+IF+ M ++ V+S N ++ G  K   G+E
Sbjct: 491 HVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGRE 550

Query: 278 V 278
           V
Sbjct: 551 V 551



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 106/200 (53%), Gaps = 6/200 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +  H  I+K  +   VF+ ++L+++Y + G +  A  +F+ +P+R+ VS   I+SGY  
Sbjct: 384 GRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQ 443

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+  EA ++F+ +   G   N      VL A    G +    G QVH  VL+S      
Sbjct: 444 LGLDEEALELFRRLQGEGMKSNYVTYTGVLTALS--GLAALDLGKQVHNHVLRSEIPSFV 501

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           ++ N LI MY  C   T  +RRIF+ +  R +ISWN+++  YS+ G+   V KLF+ M+ 
Sbjct: 502 VLQNSLIDMYSKCGNLT-YSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMRE 560

Query: 184 EGFRYSLKPNEYTFGSLITA 203
           E     +KP+  T  ++++ 
Sbjct: 561 ET---KVKPDSVTILAVLSG 577



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 21/143 (14%)

Query: 552 MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR 611
           M   G  +    +  +L+ C +      G  VHA  ++      V + + L+ +Y+KC  
Sbjct: 234 MALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDS 293

Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF--------------SQMKLDG 657
           +  A   FD MP RNV SW +MIS Y++ G+  +AL LF               ++KL  
Sbjct: 294 LGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSN 353

Query: 658 P-------LPDHVTFVGVLSACS 673
           P        P+  TF  VL++C+
Sbjct: 354 PNRPWVCTEPNEFTFATVLTSCT 376


>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 558

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/549 (40%), Positives = 330/549 (60%), Gaps = 11/549 (2%)

Query: 389 DSDVSVSNALLSLYADAG-YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
           +  +S+   LLS  A A   LS    VF  +P  D +++N++I +   S    S ++ Y+
Sbjct: 18  NDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRS--HSRFFPSHSLFYF 75

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
             MR  G   +  TF  +L A S     ++   +H+ ++KY + ++  ++NAL+  YG C
Sbjct: 76  FSMRSNGIPLDNFTFPFVLKACSRL---QINLHLHSLIVKYGLDSDIFVQNALICVYGYC 132

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL-DHFTFAT 566
           G ++   K+F  MSER D VSW+++I+ +++N    +A++L   M    + + D  T  +
Sbjct: 133 GSLEMAVKVFDEMSER-DSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLS 191

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           V+SA + +  LE G  V A   R  L   V +G+AL+DM+S+CG ID +   F+ M VRN
Sbjct: 192 VISAISHLGDLELGRWVRAFIGRLGLGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRN 251

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
           V +W ++I+G   HG   +AL +F  M+  G  PD+VTF GVL ACSH GLV EG+  F+
Sbjct: 252 VLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFE 311

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
           S+ +VY + P L+ + CMVD+LGRAG L++  +F+ +MP+ PNS+IWRT+LGAC   N  
Sbjct: 312 SIRKVYRMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHN-- 369

Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
              L  K    + ++      + VLL+N+Y + G+W + A  R  M+E  + KE GCS +
Sbjct: 370 NLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREKRIGKEPGCSSI 429

Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSY 866
            +   +H FV+GD SHP+ + I + L  +   +R+ GY+ QTK  L D+E E +E  +SY
Sbjct: 430 NVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKNVLHDIEEEEREHSLSY 489

Query: 867 HSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFND 925
           HSEK+AVAF +L+   K  IRIMKNLR+C DCHS  K IS    R+I++RD NRFHHF  
Sbjct: 490 HSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFERKIIIRDRNRFHHFEK 549

Query: 926 GKCSCGDYW 934
           G CSC DYW
Sbjct: 550 GLCSCHDYW 558



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 191/407 (46%), Gaps = 56/407 (13%)

Query: 109 QVHCLVLKSNQTFDGL-VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQ 167
           ++HC ++KS++  D L +  +L++   +  ES   AR +F  I + D I++N+II  +S+
Sbjct: 6   RLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRSHSR 65

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
              + S+F  FS M+  G    +  + +TF  ++ A      S   +   + +++ K GL
Sbjct: 66  FFPSHSLFYFFS-MRSNG----IPLDNFTFPFVLKAC-----SRLQINLHLHSLIVKYGL 115

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL------------------- 268
            SD++V +AL+  +   G+   A K+F++M +++ VS + +                   
Sbjct: 116 DSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEK 175

Query: 269 MEGRRK-----------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
           M+   K                       G+ V  ++ R GL   VA+G  L++M+++CG
Sbjct: 176 MQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGVSVALGTALIDMFSRCG 235

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
           +ID+S  VF  M  ++ ++W  +I+GL  +G   EA+  F +MR+ G+     +    L 
Sbjct: 236 SIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLV 295

Query: 366 SCASLGWIMLGQQIHGEGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQ 423
           +C+  G +  G  I     K+  +D  +     ++ +   AG L+        MP + + 
Sbjct: 296 ACSHGGLVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNS 355

Query: 424 VSWNSVIGAFADSEAL-VSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
           + W +++GA  +   L ++E VK  +    +  + + V   N+  AA
Sbjct: 356 IIWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAA 402



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 130/267 (48%), Gaps = 14/267 (5%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVG--DLASASKLFDEMPDRNSVSWACIVSGYTHK 64
            H  I+K     D     TL+   V      L+ A  +F  +P  +++++  I+  ++ +
Sbjct: 7   LHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRSHS-R 65

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
              + +   F  M   G  L+ +    VL+AC     S  +  + +H L++K     D  
Sbjct: 66  FFPSHSLFYFFSMRSNGIPLDNFTFPFVLKAC-----SRLQINLHLHSLIVKYGLDSDIF 120

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V N LI +YG C  S + A ++F+E+  RD +SW+++I+ +   G       LF +MQ E
Sbjct: 121 VQNALICVYGYC-GSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLE 179

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                + P+E T  S+I+A   S L    L + + A + + GL   + +G+AL+  F+R 
Sbjct: 180 D---KVVPDEVTMLSVISAI--SHLGDLELGRWVRAFIGRLGLGVSVALGTALIDMFSRC 234

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG 271
           G+   +  +FE+M  +NV++   L+ G
Sbjct: 235 GSIDESIVVFEKMAVRNVLTWTALING 261



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 124/256 (48%), Gaps = 11/256 (4%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  I+K+G   D+F+ N LI VY   G L  A K+FDEM +R+SVSW+ +++ + + G 
Sbjct: 106 LHSLIVKYGLDSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGY 165

Query: 67  SNEACKMFKEM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
           ++EA  +F++M +    + +   + SV+ A    G    + G  V   + +        +
Sbjct: 166 ASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLG--DLELGRWVRAFIGRLGLGVSVAL 223

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
              LI M+  C  S D +  +FE++  R++++W ++I+     G +     +F  M++ G
Sbjct: 224 GTALIDMFSRC-GSIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSG 282

Query: 186 FRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
               ++P+  TF G L+  ++  ++   + + + +  V +   L D Y    +V    R 
Sbjct: 283 ----VQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYRMDPLLDHY--GCMVDILGRA 336

Query: 245 GNFYYARKIFEQMIQK 260
           G    A    E+M  K
Sbjct: 337 GLLNEAYDFVERMPMK 352


>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
 gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/620 (35%), Positives = 360/620 (58%), Gaps = 8/620 (1%)

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR-RDGLMSSNFSLISTLSSCASLGWIMLG 376
           + K SV   + I  L     Y +A+  F      DG      +  + +++C  L  I   
Sbjct: 92  VKKSSVGICSQIEKLVLCKKYRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGV 151

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +++    +  G + D  + N +L ++   G +    ++F  MP  + VSW ++I  + DS
Sbjct: 152 KRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDS 211

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
              V EA + ++ MR   +     TF  ++ A++   +   G Q+H+  IK  +  +  +
Sbjct: 212 GNYV-EAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFV 270

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
             AL+  Y KCG ++D   +F  M ++   V WNS+I+GY  +    +A++L   M   G
Sbjct: 271 SCALIDMYSKCGSLEDAHCVFDEMPDK-TIVGWNSIIAGYALHGYSEEALDLYHEMRDSG 329

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
            ++DHFTF+ ++  C+ +A++ R  +VHA  VR     DVV  +ALVD YSK G++D A 
Sbjct: 330 VKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDAR 389

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
             FD M  RN+ SWN++I+GY  HGHG++A+ +F +M  +G +P+HVTF+ VLSACS +G
Sbjct: 390 HVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISG 449

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
           L + G++ F+SM++ + + P+   F+CM++LLGR G LD+    I K P  P + +W  +
Sbjct: 450 LFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAAL 509

Query: 737 LGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAE 796
           L A CR +    ELG+ AA  L+ MEP+   NY++L N+Y S GK ++ A   + +K   
Sbjct: 510 LRA-CRVH-GNLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKG 567

Query: 797 VKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTK-FALFDL 855
           ++    CSW+ + +  H F++GD+ H + + +  K+ EL   +   GYVP+ + F L D+
Sbjct: 568 LRMLPACSWIEVNNQPHAFLSGDKHHVQIEKVVGKVDELMLNISKLGYVPEEQNFMLPDV 627

Query: 856 EPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
           + E++E +  YHSEK+A+A+ +L    K P++I+++ R+C DCHS  K I+ I  REIV+
Sbjct: 628 D-ENEEKIRMYHSEKLAIAYGLLNTLEKTPLQIVQSHRICSDCHSVIKLIAMITKREIVI 686

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RD++RFHHF DG CSCGDYW
Sbjct: 687 RDASRFHHFRDGSCSCGDYW 706



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 212/427 (49%), Gaps = 19/427 (4%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R  K +  Y++ +G      + N ++ M+ KCG + D+  +F  M  +++VSW T+ISG 
Sbjct: 149 RGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGY 208

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
             +G Y EA   F  MR +       +  + + + A L  I  G+Q+H   +K GL  D+
Sbjct: 209 VDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDI 268

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            VS AL+ +Y+  G L     VF  MP+   V WNS+I  +A       EA+  Y +MR 
Sbjct: 269 FVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYA-LHGYSEEALDLYHEMRD 327

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           +G   +  TF  I+   S  +      QVHA +++     +     AL+  Y K G++DD
Sbjct: 328 SGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDD 387

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
              +F RMS  R+ +SWN++I+GY ++    +A+++   M++ G   +H TF  VLSAC+
Sbjct: 388 ARHVFDRMS-CRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACS 446

Query: 573 SVATLERGMEV-------HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
                ERG E+       H    RA + F     + ++++  + G +D A       P +
Sbjct: 447 ISGLFERGWEIFQSMTRDHKVKPRA-MHF-----ACMIELLGREGLLDEAYALIRKAPFQ 500

Query: 626 NVYS-WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT-FVGVLSACSHAGLVDEGFK 683
              + W +++   A   HG+  L  F+  KL G  P+ ++ ++ +L+  + +G + E   
Sbjct: 501 PTANMWAALLR--ACRVHGNLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAAD 558

Query: 684 HFKSMSQ 690
            F+++ +
Sbjct: 559 VFQTLKR 565



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 120/483 (24%), Positives = 215/483 (44%), Gaps = 47/483 (9%)

Query: 11  ILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEA 70
           ++ +GF  D ++ N ++ ++V+ G +  A +LFDEMP RN+VSW  I+SGY   G   EA
Sbjct: 158 MVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEA 217

Query: 71  CKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLI 130
            ++F  M    +        +++RA    G      G Q+H   +K+    D  VS  LI
Sbjct: 218 FRLFILMREEFYDCGPRTFATMIRA--SAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALI 275

Query: 131 AMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRY 188
            MY  C  LE   C   +F+E+  + ++ WNSII+ Y+  G +     L+  M+  G   
Sbjct: 276 DMYSKCGSLEDAHC---VFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSG--- 329

Query: 189 SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
            +K + +TF  +I     S L+     +Q+ A + + G   D+   +ALV  +++ G   
Sbjct: 330 -VKMDHFTFSIIIRIC--SRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVD 386

Query: 249 YARKIFEQMIQKNVVSMNGLMEGRRKGKEVHG--------YLIRSGLFDMVAVGNGLVNM 300
            AR +F++M  +N++S N L+ G   G   HG         ++R G+         +++ 
Sbjct: 387 DARHVFDRMSCRNIISWNALIAGY--GNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSA 444

Query: 301 YAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMS 355
            +  G  +    +F+ M     +   ++ +  MI  L + G  +EA   +  +R+     
Sbjct: 445 CSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEA---YALIRKAPFQP 501

Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
           +     + L +C   G + LG +   E L       +S    LL++Y  +G L     VF
Sbjct: 502 TANMWAALLRACRVHGNLELG-KFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVF 560

Query: 416 --------FLMPEHDQVSWNSVIGAFADS-------EALVSEAVKYYLDMRRAGWSPNGV 460
                    ++P    +  N+   AF          E +V +  +  L++ + G+ P   
Sbjct: 561 QTLKRKGLRMLPACSWIEVNNQPHAFLSGDKHHVQIEKVVGKVDELMLNISKLGYVPEEQ 620

Query: 461 TFI 463
            F+
Sbjct: 621 NFM 623



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 161/344 (46%), Gaps = 24/344 (6%)

Query: 213 YLLQQILAMVKKAGLLSDL------------YVGSALVSGFARLGNFYYARKIFEQMIQK 260
           Y+  ++L M  K G++ D                  ++SG+   GN+  A ++F  M ++
Sbjct: 168 YMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREE 227

Query: 261 ----------NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDS 310
                      ++  +  +E    G+++H   I++GL   + V   L++MY+KCG+++D+
Sbjct: 228 FYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDA 287

Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
             VF  M  K  V WN++I+G   +G  EEA+  +  MR  G+   +F+    +  C+ L
Sbjct: 288 HCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRL 347

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
             +   +Q+H   ++ G   DV  + AL+  Y+  G +     VF  M   + +SWN++I
Sbjct: 348 ASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALI 407

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
             + +      EA+  +  M R G  PN VTF+ +L+A S   + + G ++   + + + 
Sbjct: 408 AGYGN-HGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHK 466

Query: 491 ANETTIENA-LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
                +  A ++   G+ G +D+   +  +   +     W +++
Sbjct: 467 VKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALL 510



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 7/200 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +  H   +K G   D+F+   LI++Y + G L  A  +FDEMPD+  V W  I++GY  
Sbjct: 252 GRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYAL 311

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G S EA  ++ EM  +G  ++ +    ++R C     +      QVH  ++++    D 
Sbjct: 312 HGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRL--ASVARAKQVHASLVRNGFGLDV 369

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           + +  L+  Y S     D AR +F+ +  R++ISWN++I+ Y   G       +F +M R
Sbjct: 370 VANTALVDFY-SKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLR 428

Query: 184 EGFRYSLKPNEYTFGSLITA 203
           EG    + PN  TF ++++A
Sbjct: 429 EG----MMPNHVTFLAVLSA 444



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 89/218 (40%), Gaps = 35/218 (16%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  ++++GF  DV     L++ Y + G +  A  +FD M  RN +SW  +++GY +
Sbjct: 353 AKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGN 412

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG-------------------PSGF 104
            G   EA  MF++M+R G + N     +VL AC   G                   P   
Sbjct: 413 HGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAM 472

Query: 105 KFGMQVHCL----------VLKSNQTFDGLVSNVLIAMYGSC-----LESTDCARRIFEE 149
            F   +  L           L     F    +N+  A+  +C     LE    A      
Sbjct: 473 HFACMIELLGREGLLDEAYALIRKAPFQP-TANMWAALLRACRVHGNLELGKFAAEKLYG 531

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
           +E   L ++  ++++Y+  G       +F  ++R+G R
Sbjct: 532 MEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGLR 569


>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 240/645 (37%), Positives = 373/645 (57%), Gaps = 40/645 (6%)

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           ++GN L++ Y KCG++  +R VF  +  +  V+WN+MI+   +NG  +EAI  +  M  D
Sbjct: 112 SLGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPD 171

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD-SDVSVSNALLSLYADAGYLSR 410
           G++   F+  S   + + LG +  GQ+ HG+ + LG+  S+V V +AL+ +YA  G +  
Sbjct: 172 GILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRD 231

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
              V   +   D V + ++I  ++       E+++ + +M + G   N  T  ++L    
Sbjct: 232 ARLVSDQVVGKDVVLFTALIVGYSH-HGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCG 290

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
           +      G  +H  ++K        +E+A                           V+W 
Sbjct: 291 NLEDLTSGRLIHGLIVK------AGLESA---------------------------VTWT 317

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           S+I G + N     A+     M++     + FT ++VL AC+S+A LE+G ++HA  ++ 
Sbjct: 318 SVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKF 377

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
            L+ D  +G+AL+D Y KCG  + A   F+ +   +V S NSMI  YA++G G +AL LF
Sbjct: 378 GLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLF 437

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
           S MK  G  P++VT++GVLSAC++AGL++EG   F S      +    + ++CMVDLLGR
Sbjct: 438 SGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGR 497

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
           AG L + E  IN++ I+ + +IWRT+L A CR +    E+ ++  N + ++ P++   +V
Sbjct: 498 AGRLKEAEMLINQVNIS-DVVIWRTLLSA-CRIH-GDVEMAKRVMNRVIDLAPEDGGTHV 554

Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
           LL+N+YAS G W  V + + AM+E  +KK    SWV ++  +H F+AGD SHP    I E
Sbjct: 555 LLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIRE 614

Query: 831 KLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNS--KLPIRIM 888
           KL+EL +K+++ GYVP T+F L DL+ E K   + YHSEK+AVAF L R++     IRI+
Sbjct: 615 KLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRIL 674

Query: 889 KNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
           KNLRVCGDCH+  KF+SKIVGR+I+ RD  RFHHF +G CSCGDY
Sbjct: 675 KNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDY 719



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 225/458 (49%), Gaps = 31/458 (6%)

Query: 108 MQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQ 167
           +Q H L     + F   + N LI  Y  C  S   AR++F+E+  R +++WNS+I+ Y +
Sbjct: 100 IQSHAL----KRGFHHSLGNKLIDAYLKC-GSVVYARKVFDEVPHRHIVAWNSMIASYIR 154

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
            G +     ++ RM  +G    + P+E+TF S+  A     L          ++V   G+
Sbjct: 155 NGRSKEAIDIYQRMVPDG----ILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGV 210

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG-RRKGKEVHGYLIRSG 286
            S+++VGSALV  +A+ G    AR + +Q++ K+VV    L+ G    G++     +   
Sbjct: 211 -SNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRN 269

Query: 287 LFDMVAVGN--GLVNMYAKCGTIDDSRSVFRFMIG-------KDSVSWNTMISGLDQNGC 337
           +       N   L ++   CG ++D  S  R + G       + +V+W ++I GL QNG 
Sbjct: 270 MTKKGIEANEYTLSSVLVCCGNLEDLTS-GRLIHGLIVKAGLESAVTWTSVIVGLVQNGR 328

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
            E A++ F  M R  +  ++F+L S L +C+SL  +  G+QIH   +K GLD D  V  A
Sbjct: 329 EEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAA 388

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
           L+  Y   G       VF  + E D VS NS+I ++A +     EA++ +  M+  G  P
Sbjct: 389 LIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQN-GFGHEALQLFSGMKDTGLEP 447

Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN-ETTIEN--ALLSCYGKCGEMDDCE 514
           N VT++ +L+A +  + G L    H      N  N E T ++   ++   G+ G + + E
Sbjct: 448 NNVTWLGVLSACN--NAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAE 505

Query: 515 KIFARMSERRDEVSWNSMISG-YIHN--ELLPKAMNLV 549
            +  +++   D V W +++S   IH   E+  + MN V
Sbjct: 506 MLINQVN-ISDVVIWRTLLSACRIHGDVEMAKRVMNRV 542



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 208/436 (47%), Gaps = 30/436 (6%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           LK GF +   L N LI+ Y++ G +  A K+FDE+P R+ V+W  +++ Y   G S EA 
Sbjct: 105 LKRGFHHS--LGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAI 162

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
            +++ MV  G L + +   SV +A  + G    G +   Q   L +  +  F   V + L
Sbjct: 163 DIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVF---VGSAL 219

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           + MY    +  D AR + +++  +D++ + ++I  YS  G+     ++F  M ++G    
Sbjct: 220 VDMYAKFGKMRD-ARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKG---- 274

Query: 190 LKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           ++ NEYT  S++        + SG    + I  ++ KAGL S +   S +V G  + G  
Sbjct: 275 IEANEYTLSSVLVCCGNLEDLTSG----RLIHGLIVKAGLESAVTWTSVIV-GLVQNGRE 329

Query: 248 YYARKIFEQM----IQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGL 297
             A   F QM    I  N  +++ ++          +GK++H  +++ GL     VG  L
Sbjct: 330 EIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAAL 389

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           ++ Y KCG+ + +RSVF  ++  D VS N+MI    QNG   EA+  F  M+  GL  +N
Sbjct: 390 IDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNN 449

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLG-LDSDVSVSNALLSLYADAGYLSRCLKVFF 416
            + +  LS+C + G +  G  I       G ++        ++ L   AG L     +  
Sbjct: 450 VTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLIN 509

Query: 417 LMPEHDQVSWNSVIGA 432
            +   D V W +++ A
Sbjct: 510 QVNISDVVIWRTLLSA 525



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 85/152 (55%), Gaps = 4/152 (2%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +++++  C  + ++    ++ +  ++    F   +G+ L+D Y KCG + YA + FD +P
Sbjct: 81  YSSLIQQCIGIKSITDITKIQSHALKR--GFHHSLGNKLIDAYLKCGSVVYARKVFDEVP 138

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            R++ +WNSMI+ Y R+G   +A+ ++ +M  DG LPD  TF  V  A S  GLV EG +
Sbjct: 139 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEG-Q 197

Query: 684 HFKSMSQVYGL-IPQLEQFSCMVDLLGRAGEL 714
                S V G+ +  +   S +VD+  + G++
Sbjct: 198 RAHGQSVVLGVGVSNVFVGSALVDMYAKFGKM 229


>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 676

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 233/663 (35%), Positives = 374/663 (56%), Gaps = 11/663 (1%)

Query: 276 KEVHGYLIRSG-LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           K +H ++++SG LF     G+ L++ Y KC  I ++R +F  M  +  V+WN+MIS    
Sbjct: 21  KSLHTHILKSGSLFSFF--GHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVS 78

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD-SDVS 393
            G  +EAI  +  M  +G++   ++  +   + + +G    GQ+ HG  + LG + SD  
Sbjct: 79  RGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGF 138

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V+  ++ +YA  G +     VF  + + D V + ++I  + +   L  EA++ + DM  +
Sbjct: 139 VATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGY-NQRGLDGEALEVFEDMVGS 197

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
              PN  T  ++L +  +      G  +H  V+K  + +    + +LL+ Y KC  ++D 
Sbjct: 198 RIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDS 257

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
            K+F  ++     V+W S I G + N     A+++   M++     +HFTF+++L AC+S
Sbjct: 258 IKVFNSLA-YASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSS 316

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           +A LE G ++HA  V+  ++ +  + +AL+ +Y KCG ++ A   F+ +   +V S N+M
Sbjct: 317 LAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTM 376

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I  YA++G G +AL LF +MK  G  P+ VTF+ +L AC++AGLV+EG + F  +   + 
Sbjct: 377 IYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHS 436

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           +    + ++CM+DLLGRA   ++    I +    P+ + WRT+L AC      + E+  K
Sbjct: 437 IELTRDHYTCMIDLLGRAKRFEEAAMLIEEGK-NPDVIQWRTLLNACKIHG--EVEMAEK 493

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
               + +  P++   ++LL N+YAS GKW++V + + A ++  +KK    SWV +   VH
Sbjct: 494 FMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVH 553

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
            F+AGD SHP    I E L EL +K+   GY P TKF L DLE E K   + YHSEK+A+
Sbjct: 554 TFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAI 613

Query: 874 AFVL--TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
           AF L  T      IRI KNLRVCGDCHS  KF+S + GR+I+ RD+ RFHHF  G CSC 
Sbjct: 614 AFALWKTCGKNTAIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDAKRFHHFKGGICSCK 673

Query: 932 DYW 934
           DYW
Sbjct: 674 DYW 676



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 137/477 (28%), Positives = 234/477 (49%), Gaps = 56/477 (11%)

Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
           +H  +LKS   F     + LI  Y  C   T+ AR++F+E+  R +++WNS+IS +  RG
Sbjct: 23  LHTHILKSGSLF-SFFGHKLIDGYIKCSVITE-ARKLFDEMPNRHIVTWNSMISSHVSRG 80

Query: 170 DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL-L 228
            T    +L+  M  EG    + P+ YTF ++  A     +S        LA+V   G  +
Sbjct: 81  KTKEAIELYDNMLFEG----VLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVV--LGFEV 134

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------------- 274
           SD +V + +V  +A+ G    AR +F++++ K+VV    L+ G  +              
Sbjct: 135 SDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDM 194

Query: 275 ---------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
                                      GK +HG +++SGL  +VA    L+ MY+KC  +
Sbjct: 195 VGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMV 254

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
           +DS  VF  +     V+W + I GL QNG  E A+  F  M R  +  ++F+  S L +C
Sbjct: 255 EDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHAC 314

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
           +SL  +  G+QIH   +KLG+D +  V  AL+ LY   G + +   VF  + E D VS N
Sbjct: 315 SSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSIN 374

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           ++I A+A +     EA++ +  M++ G  PN VTFI+IL A ++  + + G Q+ + +I+
Sbjct: 375 TMIYAYAQN-GFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFS-LIR 432

Query: 488 YNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
            N + E T ++   ++   G+    ++   +     +  D + W ++++   IH E+
Sbjct: 433 NNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEE-GKNPDVIQWRTLLNACKIHGEV 488



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 203/419 (48%), Gaps = 56/419 (13%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  ILK G  +  F  + LI+ Y++   +  A KLFDEMP+R+ V+W  ++S +  +
Sbjct: 21  KSLHTHILKSGSLFS-FFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSR 79

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCL-VLKSNQTFDG 123
           G + EA +++  M+  G L + Y   ++ +A  E G S  + G + H L V+   +  DG
Sbjct: 80  GKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVS--REGQKAHGLAVVLGFEVSDG 137

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V+  ++ MY    +  D AR +F+ +  +D++ + ++I  Y+QRG      ++F  M  
Sbjct: 138 FVATGIVDMYAKFGKMKD-ARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMV- 195

Query: 184 EGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            G R  +KPNEYT  S++ +      +++G    + I  +V K+GL S +   ++L++ +
Sbjct: 196 -GSR--IKPNEYTLASVLVSCGNLGDLVNG----KLIHGLVVKSGLESVVASQTSLLTMY 248

Query: 242 ARLGNFYYARKIFEQMIQKNVVS----MNGLMEGRRK----------------------- 274
           ++      + K+F  +   + V+    + GL++  R+                       
Sbjct: 249 SKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFS 308

Query: 275 --------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                         G+++H   ++ G+     V   L+++Y KCG ++ +RSVF  +   
Sbjct: 309 SILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTEL 368

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           D VS NTMI    QNG   EA+  F  M++ G   +  + IS L +C + G +  G QI
Sbjct: 369 DVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQI 427



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 137/315 (43%), Gaps = 19/315 (6%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + KL H  ++K G    V    +L+ +Y +   +  + K+F+ +   + V+W   + G  
Sbjct: 221 NGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLV 280

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G    A  MF+EM+R     N +   S+L AC        + G Q+H + +K     +
Sbjct: 281 QNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAM--LEAGEQIHAVTVKLGVDGN 338

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V   LI +YG C  + + AR +FE +   D++S N++I  Y+Q G      +LF RM+
Sbjct: 339 KYVDAALIHLYGKC-GNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMK 397

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK---AGLLSDLYVGSALVS 239
           + G     KPN  TF S++ A  ++ L       QI ++++      L  D Y  + ++ 
Sbjct: 398 KLGH----KPNVVTFISILLACNNAGLVEEGC--QIFSLIRNNHSIELTRDHY--TCMID 449

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG-- 296
              R   F  A  + E+    +V+    L+   +   EV         + D      G  
Sbjct: 450 LLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTH 509

Query: 297 --LVNMYAKCGTIDD 309
             L N+YA  G  D+
Sbjct: 510 ILLTNIYASAGKWDN 524


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 244/695 (35%), Positives = 387/695 (55%), Gaps = 47/695 (6%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD---SRSVFRFMIGKDSVSWNTMISGL 332
           + +H  +I++GL +     + L+         D    + SVF  +   + + WNTM  G 
Sbjct: 5   RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGH 64

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
             +     A+  +  M   GL+  +++    L SCA       GQQIHG  LKLG D D+
Sbjct: 65  ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDI 124

Query: 393 SVSNALLSLYAD--------------------------AGYLSR-----CLKVFFLMPEH 421
            V  +L+S+YA                           AGY+SR       K+F  +P  
Sbjct: 125 YVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGK 184

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRR-AGWSPNGVTFINILAAASSFSMGKLGHQ 480
           D VSWN++I  + ++     EA++ + +M       P+  T + +++A +     +LG  
Sbjct: 185 DVVSWNAMISGYVET-GNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRH 243

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           VH+ +  +  A+   I NAL+  Y K GE++   ++F  +   +D +SWN++I GY H  
Sbjct: 244 VHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLW-NKDVISWNTLIGGYTHMN 302

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC---GVRACLEFDVV 597
           L  +A+ L   M++ G+  +  T  ++L ACA +  ++ G  +H      ++  +     
Sbjct: 303 LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSS 362

Query: 598 IGSALVDMYSKCGRIDYASRFFDL-MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
           + ++L+DMY+KCG ID A + FD  M  R++ +WN+MISG+A HG  + A  +FS+M+++
Sbjct: 363 LQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMN 422

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
           G  PD +TFVG+LSACSH+G++D G   F+SM++ Y + P+LE + CM+DLLG +G   +
Sbjct: 423 GIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKE 482

Query: 717 IEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANM 775
            EE IN MP+ P+ +IW ++L AC    N    ELG   A  L ++EP N+ +YVLL+N+
Sbjct: 483 AEEMINTMPMEPDGVIWCSLLKACKIHGNL---ELGESFAKKLIKIEPGNSGSYVLLSNI 539

Query: 776 YASGGKWEDVAKARKAMKEAEVKKE-AGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           YA+ G+W +VAK R  + +  +KK+  GCS + +   VH F+ GD+ HP+   IY  L+E
Sbjct: 540 YAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEE 599

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRV 893
           +   + +AG+VP T   L ++E E +E  + +HSEK+A+AF +++      + IMKNLRV
Sbjct: 600 MEVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLTIMKNLRV 659

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKC 928
           C +CH A K ISKI  REI+ RD  RF HF DG C
Sbjct: 660 CKNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694



 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 242/513 (47%), Gaps = 56/513 (10%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           A  +F+ I+  +L+ WN++   ++   D +S  KL+  M   G    L P+ YTF  L+ 
Sbjct: 42  AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLG----LLPDSYTFPFLLK 97

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
           +   S +      QQI   V K G   D+YV ++L+S +A+ G    ARK+F+    ++V
Sbjct: 98  SCAKSKIRKEG--QQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDV 155

Query: 263 VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
           VS   L+ G                             Y   G I+ ++ +F  + GKD 
Sbjct: 156 VSYTALIAG-----------------------------YVSRGYIESAQKLFDEIPGKDV 186

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF-----SLISTLSSCASLGWIMLGQ 377
           VSWN MISG  + G Y+EA+  F  M    +M +N      ++++ +S+CA    I LG+
Sbjct: 187 VSWNAMISGYVETGNYKEALELFKEM----MMMTNVRPDESTMVTVVSACAQSDSIELGR 242

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
            +H      G  S++ + NAL+ LY+  G +    ++F  +   D +SWN++IG +    
Sbjct: 243 HVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMN 302

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV---IKYNVANET 494
            L  EA+  + +M R+G +PN VT ++IL A +      +G  +H  +   +K  V N +
Sbjct: 303 -LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVS 361

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
           +++ +L+  Y KCG++D  +++F      R   +WN+MISG+  +     A ++   M  
Sbjct: 362 SLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRM 421

Query: 555 RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCG 610
            G   D  TF  +LSAC+    L+ G  +     R    +++         ++D+    G
Sbjct: 422 NGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRG---YEITPKLEHYGCMIDLLGHSG 478

Query: 611 RIDYASRFFDLMPVR-NVYSWNSMISGYARHGH 642
               A    + MP+  +   W S++     HG+
Sbjct: 479 LFKEAEEMINTMPMEPDGVIWCSLLKACKIHGN 511



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 136/561 (24%), Positives = 239/561 (42%), Gaps = 69/561 (12%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLIN---VYVRVGDLASASKLFDEMPDRNSVSWACI 57
           S   +  H Q++K G     +  + L+    V         A  +FD + + N + W  +
Sbjct: 1   SSSVRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTM 60

Query: 58  VSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
             G+        A K++  M+  G L + Y    +L++C +      K G Q+H  VLK 
Sbjct: 61  FRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIR--KEGQQIHGHVLKL 118

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
               D  V   LI+MY       D AR++F+    RD++S+ ++I+ Y  RG   S  KL
Sbjct: 119 GFDLDIYVHTSLISMYAQNGRLED-ARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKL 177

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F  +  +                                             D+   +A+
Sbjct: 178 FDEIPGK---------------------------------------------DVVSWNAM 192

Query: 238 VSGFARLGNFYYARKIFEQMIQKN-----------VVSMNGLMEGRRKGKEVHGYLIRSG 286
           +SG+   GN+  A ++F++M+              VVS     +    G+ VH ++   G
Sbjct: 193 ISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHG 252

Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFC 346
               + + N L+++Y+K G ++ +  +F  +  KD +SWNT+I G      Y+EA++ F 
Sbjct: 253 FASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQ 312

Query: 347 AMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH---GEGLKLGLDSDVSVSNALLSLYA 403
            M R G   ++ +++S L +CA LG I +G+ IH    + LK  + +  S+  +L+ +YA
Sbjct: 313 EMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYA 372

Query: 404 DAGYLSRCLKVF-FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
             G +    +VF   M      +WN++I  FA      + A   +  MR  G  P+ +TF
Sbjct: 373 KCGDIDAAQQVFDSSMSNRSLSTWNAMISGFA-MHGRANAAFDIFSRMRMNGIEPDDITF 431

Query: 463 INILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           + +L+A S   M  LG  +   + + Y +  +      ++   G  G   + E++   M 
Sbjct: 432 VGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMP 491

Query: 522 ERRDEVSWNSMISG-YIHNEL 541
              D V W S++    IH  L
Sbjct: 492 MEPDGVIWCSLLKACKIHGNL 512



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 113/467 (24%), Positives = 211/467 (45%), Gaps = 66/467 (14%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLA------------------------ 37
           K+ +  H  +LK GF  D+++  +LI++Y + G L                         
Sbjct: 106 KEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGY 165

Query: 38  -------SASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKE-MVRAGFLLNRYAL 89
                  SA KLFDE+P ++ VSW  ++SGY   G   EA ++FKE M+      +   +
Sbjct: 166 VSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTM 225

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
            +V+ AC +      + G  VH  +       +  + N LI +Y S     + A  +F+ 
Sbjct: 226 VTVVSACAQS--DSIELGRHVHSWINDHGFASNLKIVNALIDLY-SKFGEVETACELFDG 282

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA--YSS 207
           +  +D+ISWN++I  Y+          LF  M R G      PN+ T  S++ A     +
Sbjct: 283 LWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG----ETPNDVTMLSILPACAHLGA 338

Query: 208 VLSGSYLLQQILAMVKKAGLLSDL-YVGSALVSGFARLGNFYYARKIFE-QMIQKNVVSM 265
           +  G ++   +    K  G+++++  + ++L+  +A+ G+   A+++F+  M  +++ + 
Sbjct: 339 IDIGRWI--HVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTW 396

Query: 266 NGL-----MEGRRKGK-EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
           N +     M GR     ++   +  +G+        GL++  +  G +D  R++FR M  
Sbjct: 397 NAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTR 456

Query: 320 KDSVS-----WNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
              ++     +  MI  L  +G ++EA  ++N   M  DG++       S L +C   G 
Sbjct: 457 GYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVI-----WCSLLKACKIHGN 511

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLKVFFLM 418
           + LG+    + +K  ++   S S  LLS +YA AG  +   K+  L+
Sbjct: 512 LELGESFAKKLIK--IEPGNSGSYVLLSNIYAAAGRWNEVAKIRALL 556


>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 224/582 (38%), Positives = 327/582 (56%), Gaps = 8/582 (1%)

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
           ++++   S L SC     +  G+Q+H +   LG+  +  ++  L+ LYA +  L     +
Sbjct: 45  TTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNL 104

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  +P+ +   WN +I  +A        A+  Y  M   G  P+  T   +L A S+ S 
Sbjct: 105 FDKIPKQNLFLWNVLIRGYA-WNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSA 163

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
              G  +H  VIK     +  +  AL+  Y KCG + D  ++F ++  R D V WNSM++
Sbjct: 164 IGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVR-DAVLWNSMLA 222

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
            Y  N    ++++L   M   G R    T  TV+S+ A VA L  G E+H  G R   + 
Sbjct: 223 AYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQS 282

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
           +  + +AL+DMY+KCG +  A   F+ +  + V SWN++I+GYA HG    AL LF +M+
Sbjct: 283 NDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMR 342

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
            +   PDH+TFVGVL+ACS   L+DEG   +  M + YG+ P ++ ++CM+DLLG  G+L
Sbjct: 343 KEDR-PDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQL 401

Query: 715 DKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLA 773
           D+  + I  M + P+S +W  +L +C    N    EL   A   L E+EP ++ NYV+LA
Sbjct: 402 DEAYDLIRNMSVKPDSGVWGALLNSCKIHGN---VELAELALEKLIELEPDDSGNYVILA 458

Query: 774 NMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLK 833
           NMYA  GKWE V K R+ M +  +KK   CSW+ +K+ V+ F+AGD SH   D IY +LK
Sbjct: 459 NMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELK 518

Query: 834 ELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLR 892
            L   M +AGY P T     D+E + K  +V  HSE++A+AF L   S    + I KNLR
Sbjct: 519 RLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLR 578

Query: 893 VCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +C DCH A KFISKI+ REI +RD NR+H F  G CSCGD+W
Sbjct: 579 ICEDCHVAIKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 189/370 (51%), Gaps = 5/370 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK++H      G+     +   LV++YA   ++ ++R++F  +  ++   WN +I G   
Sbjct: 66  GKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAW 125

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           NG ++ AI+ +  M   GL   NF+L   L +C++L  I  G+ IH   +K G + D+ V
Sbjct: 126 NGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFV 185

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             AL+ +YA  G +    +VF  +   D V WNS++ A+A +     E++    +M   G
Sbjct: 186 GAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQN-GHPDESISLCREMAANG 244

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
             P   T + ++++++  +    G ++H    ++   +   ++ AL+  Y KCG +    
Sbjct: 245 VRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVAL 304

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
            +F R+ E+R  VSWN++I+GY  + L   A++L +  M++  R DH TF  VL+AC+  
Sbjct: 305 ALFERLREKR-VVSWNAIITGYAMHGLAVGALDL-FDKMRKEDRPDHITFVGVLAACSRG 362

Query: 575 ATLERGMEVHACGVRAC-LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNS 632
             L+ G  ++   VR   +   V   + ++D+   CG++D A      M V+ +   W +
Sbjct: 363 RLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGA 422

Query: 633 MISGYARHGH 642
           +++    HG+
Sbjct: 423 LLNSCKIHGN 432



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 162/316 (51%), Gaps = 13/316 (4%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN----------GLMEGRRKGKEVH 279
           +L++ + L+ G+A  G    A  ++ +M+   +   N            +    +G+ +H
Sbjct: 112 NLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIH 171

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
            Y+I+SG    + VG  L++MYAKCG + D+  VF  ++ +D+V WN+M++   QNG  +
Sbjct: 172 EYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPD 231

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           E+I     M  +G+  +  +L++ +SS A +  +  G++IHG G + G  S+  V  AL+
Sbjct: 232 ESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALI 291

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
            +YA  G +   L +F  + E   VSWN++I  +A    L   A+  +  MR+    P+ 
Sbjct: 292 DMYAKCGSVKVALALFERLREKRVVSWNAIITGYA-MHGLAVGALDLFDKMRKED-RPDH 349

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFA 518
           +TF+ +LAA S   +   G  ++  +++ Y +         ++   G CG++D+   +  
Sbjct: 350 ITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIR 409

Query: 519 RMSERRDEVSWNSMIS 534
            MS + D   W ++++
Sbjct: 410 NMSVKPDSGVWGALLN 425



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 127/486 (26%), Positives = 217/486 (44%), Gaps = 52/486 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H Q    G AY+  L   L+++Y     L +A  LFD++P +N   W  ++ GY   
Sbjct: 67  KQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWN 126

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G  + A  ++ +M+  G   + + L  VL+AC     S    G  +H  V+KS    D  
Sbjct: 127 GPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSAL--SAIGEGRSIHEYVIKSGWERDLF 184

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V   LI MY  C    D A R+F++I  RD + WNS+++ Y+Q G       L   M   
Sbjct: 185 VGAALIDMYAKCGCVMD-AGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAAN 243

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G R    P E T  ++I+++ + V    Y  ++I     + G  S+  V +AL+  +A+ 
Sbjct: 244 GVR----PTEATLVTVISSS-ADVACLPY-GREIHGFGWRHGFQSNDKVKTALIDMYAKC 297

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS-GLFDMVAVGN-----GLV 298
           G+   A  +FE++ +K VVS N ++     G  +HG  + +  LFD +   +       V
Sbjct: 298 GSVKVALALFERLREKRVVSWNAII----TGYAMHGLAVGALDLFDKMRKEDRPDHITFV 353

Query: 299 NMYAKCGT---IDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEA---IMNFCA 347
            + A C     +D+ R+++  M+    ++     +  MI  L   G  +EA   I N   
Sbjct: 354 GVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSV 413

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
               G+        + L+SC   G + L +    + ++L  D D      L ++YA +G 
Sbjct: 414 KPDSGVWG------ALLNSCKIHGNVELAELALEKLIELEPD-DSGNYVILANMYAQSGK 466

Query: 408 LSRCLKVFFLM-----PEHDQVSWNSV---IGAF-------ADSEALVSEAVKYYLDMRR 452
                K+  +M      ++   SW  V   + AF       ++S+A+ +E  +    M  
Sbjct: 467 WEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHE 526

Query: 453 AGWSPN 458
           AG++P+
Sbjct: 527 AGYAPD 532



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 146/330 (44%), Gaps = 27/330 (8%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H  ++K G+  D+F+   LI++Y + G +  A ++FD++  R++V W  +++ Y 
Sbjct: 166 EGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYA 225

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQE--CGPSGFKFGMQVHCLVLKSNQT 120
             G  +E+  + +EM   G       L +V+ +  +  C P    +G ++H    +    
Sbjct: 226 QNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLP----YGREIHGFGWRHGFQ 281

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            +  V   LI MY  C  S   A  +FE +  + ++SWN+II+ Y+  G  +    LF +
Sbjct: 282 SNDKVKTALIDMYAKC-GSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDK 340

Query: 181 MQREGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           M++E      +P+  TF G L   +   +L     L  +  MV+  G+   +   + ++ 
Sbjct: 341 MRKED-----RPDHITFVGVLAACSRGRLLDEGRALYNL--MVRDYGITPTVQHYTCMID 393

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHG-----YLIRSGLFDMVAVG 294
                G    A  +   M   +V   +G+        ++HG      L    L ++    
Sbjct: 394 LLGHCGQLDEAYDLIRNM---SVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDD 450

Query: 295 NG----LVNMYAKCGTIDDSRSVFRFMIGK 320
           +G    L NMYA+ G  +    + + MI K
Sbjct: 451 SGNYVILANMYAQSGKWEGVEKLRQVMIDK 480



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 88/183 (48%), Gaps = 2/183 (1%)

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
           Q   H+ + ++L +C     L  G ++HA      + ++  + + LV +Y+    +  A 
Sbjct: 43  QPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNAR 102

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
             FD +P +N++ WN +I GYA +G  D A+ L+ +M   G  PD+ T   VL ACS   
Sbjct: 103 NLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALS 162

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
            + EG +         G    L   + ++D+  + G +       +K+ +  ++++W ++
Sbjct: 163 AIGEG-RSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKI-VVRDAVLWNSM 220

Query: 737 LGA 739
           L A
Sbjct: 221 LAA 223


>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 902

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 265/882 (30%), Positives = 438/882 (49%), Gaps = 96/882 (10%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H    K G     F    L+N+Y R G +  A ++F  +   ++V WA ++SGY   
Sbjct: 51  KQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRA 110

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   EA  +F  M + G   +R                       V C+ +    T  G 
Sbjct: 111 GRFQEAVCLFTRMEKMGSSPDR-----------------------VTCVAVVCALTALGR 147

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIET-RDLISWNSIISVYSQR-GDTISVFKLFSRMQ 182
           + +               AR +   +      ++WN++IS Y+Q+ G    VF L+  M+
Sbjct: 148 LED---------------ARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMR 192

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSV--LSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
             G    L P   TF S+++AA ++   + G    +Q+ A   + GL ++++VGS+L++ 
Sbjct: 193 CWG----LWPTRSTFASMLSAAANATAFIEG----RQVHAAAVRHGLDANVFVGSSLINL 244

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------- 274
           +A+ G    A  +F+   +KNVV  N ++ G  +                          
Sbjct: 245 YAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTY 304

Query: 275 ---------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                          G++V    I++ +   + V N  ++M++K G IDD++++F  +  
Sbjct: 305 VSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITY 364

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           KD+VSWN ++ GL  N   EEAI     M  DG+     S  + +++C+++     G+QI
Sbjct: 365 KDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQI 424

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
           H   +K  + S+ +V ++L+  Y+  G +  C KV   +     V  N +I     +   
Sbjct: 425 HCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNR- 483

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE-TTIEN 498
             EA+  +  + R G  P+  TF +IL+  +      +G QVH   +K    N+ T++  
Sbjct: 484 EDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGV 543

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
           +L+  Y K    +D  K+   M + ++ V W +++SGY  N    +++   W M      
Sbjct: 544 SLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVH 603

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA-SR 617
            D  TFA++L AC+ +  L  G E+H   +++         SA++DMYSKCG I  +   
Sbjct: 604 PDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEA 663

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGL 677
           F +L   +++  WNSMI G+A++G+ D+AL LF +M+      D VTF+GVL AC+HAGL
Sbjct: 664 FKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGL 723

Query: 678 VDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
           + EG  +F SMS+VYG++P+++ ++C +DLLGR G L + +E IN++P  P+ +IW T L
Sbjct: 724 ISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINELPFRPDGVIWATYL 783

Query: 738 GACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEV 797
            A CR + +  E G  AA  L E+EPQN+  YVLL+NMYA+ G W +   AR+AM+E   
Sbjct: 784 AA-CRMH-KDEERGEIAAKELVELEPQNSSTYVLLSNMYAAAGNWVEAKMAREAMREKGA 841

Query: 798 KKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
            K  GCSW+T+ +   +F+  D++H     IYE L  L + M
Sbjct: 842 TKFPGCSWITVGNKTSLFLVQDKNHLGALRIYEMLDNLTRMM 883



 Score =  253 bits (647), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 189/704 (26%), Positives = 334/704 (47%), Gaps = 57/704 (8%)

Query: 65  GMSNEACKMFKEMVRA-------GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
           G +  A  +    VRA       G   +++ L + L AC   G      G Q HC   K 
Sbjct: 3   GATTSATAVLDAFVRARRCSAGGGVRPDQFDLAATLSACSRLG--ALVSGKQAHCDAEKR 60

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
                   +  L+ MY  C    D ARR+F  I   D + W S+IS Y + G       L
Sbjct: 61  GLGSGAFCAAALVNMYARCGRVGD-ARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCL 119

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F+RM++ G      P+  T  +++ A     L+    L+    ++ +    S     +A+
Sbjct: 120 FTRMEKMGS----SPDRVTCVAVVCA-----LTALGRLEDARTLLHRMPAPSSTVAWNAV 170

Query: 238 VSGFA----------------RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY 281
           +SG+A                R    +  R  F  M+     +    +EGR    +VH  
Sbjct: 171 ISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSA-AANATAFIEGR----QVHAA 225

Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
            +R GL   V VG+ L+N+YAKCG I D+  VF     K+ V WN M++GL +N    EA
Sbjct: 226 AVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEA 285

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
           I  F  M+R GL +  F+ +S L +CA L    LG+Q+    +K  +D+ + V+NA L +
Sbjct: 286 IQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDM 345

Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
           ++  G +     +F L+   D VSWN+++     +E    EA+     M   G +P+ V+
Sbjct: 346 HSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEE-DEEAIHMLKGMNLDGVTPDEVS 404

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           F  ++ A S+    + G Q+H   +K+++ +   + ++L+  Y K G+++ C K+ A++ 
Sbjct: 405 FATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQV- 463

Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
           +    V  N +I+G + N    +A++L   +++ G +   FTF+++LS C  + +   G 
Sbjct: 464 DASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGK 523

Query: 582 EVHACGVRAC-LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSMISGYAR 639
           +VH   +++  L  D  +G +LV  Y K    + A++    MP  +N+  W +++SGYA+
Sbjct: 524 QVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQ 583

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ-- 697
           +G+  ++L  F +M+     PD VTF  +L ACS    + +G        +++GLI +  
Sbjct: 584 NGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDG-------KEIHGLIIKSG 636

Query: 698 ----LEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
                   S ++D+  + G++    E   ++    +  +W +++
Sbjct: 637 FGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMI 680



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 229/476 (48%), Gaps = 40/476 (8%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK+ H    + GL         LVNMYA+CG + D+R VF  +   D+V W +MISG  +
Sbjct: 50  GKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHR 109

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G ++EA+  F  M + G      + ++ + +  +L                        
Sbjct: 110 AGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTAL------------------------ 145

Query: 395 SNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
                      G L     +   MP     V+WN+VI  +A    +  E    Y DMR  
Sbjct: 146 -----------GRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCW 194

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G  P   TF ++L+AA++ +    G QVHA  +++ +     + ++L++ Y KCG + D 
Sbjct: 195 GLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDA 254

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
             +F   S  ++ V WN+M++G + NE   +A+ +  +M + G   D FT+ +VL ACA 
Sbjct: 255 ILVF-DCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAH 313

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           + +   G +V    ++ C++  + + +A +DM+SK G ID A   F+L+  ++  SWN++
Sbjct: 314 LDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNAL 373

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           + G   +   ++A+ +   M LDG  PD V+F  V++ACS+    + G K    ++  + 
Sbjct: 374 LVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETG-KQIHCLAMKHS 432

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
           +       S ++D   + G+++   + + +  +  +S++ R VL A    N R+ E
Sbjct: 433 ICSNHAVGSSLIDFYSKHGDVESCRKVLAQ--VDASSIVPRNVLIAGLVQNNREDE 486



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 138/578 (23%), Positives = 258/578 (44%), Gaps = 55/578 (9%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H   ++HG   +VF+ ++LIN+Y + G +  A  +FD   ++N V W  +++G  
Sbjct: 218 EGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLV 277

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                 EA +MF  M R G   + +   SVL AC          G QV C+ +K+     
Sbjct: 278 RNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHL--DSHCLGRQVQCVTIKNCMDAS 335

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V+N  + M+ S   + D A+ +F  I  +D +SWN+++   +   +      +   M 
Sbjct: 336 LFVANATLDMH-SKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMN 394

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            +G    + P+E +F ++I A   S +  +   +QI  +  K  + S+  VGS+L+  ++
Sbjct: 395 LDG----VTPDEVSFATVINAC--SNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYS 448

Query: 243 RLGNFYYARKIFEQMIQKNVVSMN----GLMEGRRK------------------------ 274
           + G+    RK+  Q+   ++V  N    GL++  R+                        
Sbjct: 449 KHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSS 508

Query: 275 -------------GKEVHGYLIRSG-LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG- 319
                        GK+VH Y ++SG L D  +VG  LV  Y K    +D+  +   M   
Sbjct: 509 ILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDH 568

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           K+ V W  ++SG  QNG   +++++F  MR   +     +  S L +C+ +  +  G++I
Sbjct: 569 KNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEI 628

Query: 380 HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF-LMPEHDQVSWNSVIGAFADSEA 438
           HG  +K G  S  + ++A++ +Y+  G +    + F  L  + D   WNS+I  FA +  
Sbjct: 629 HGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKN-G 687

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIE 497
              EA+  +  M+ +    + VTF+ +L A +   +   G      + K Y +       
Sbjct: 688 YADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHY 747

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
              +   G+ G + + +++   +  R D V W + ++ 
Sbjct: 748 ACFIDLLGRGGHLQEAQEVINELPFRPDGVIWATYLAA 785



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 131/276 (47%), Gaps = 10/276 (3%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           ++  K  H   +KH    +  + ++LI+ Y + GD+ S  K+  ++   + V    +++G
Sbjct: 418 TETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAG 477

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
                  +EA  +F++++R G   + +   S+L  C   G      G QVHC  LKS   
Sbjct: 478 LVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCT--GLLSSIIGKQVHCYTLKSGFL 535

Query: 121 FDGLVSNV-LIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
            D     V L+  Y       D  + + E  + ++L+ W +I+S Y+Q G +      F 
Sbjct: 536 NDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFW 595

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           RM+     Y + P+E TF S++ A   S ++     ++I  ++ K+G  S     SA++ 
Sbjct: 596 RMR----SYDVHPDEVTFASILKAC--SEMTALSDGKEIHGLIIKSGFGSYKTATSAIID 649

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSM-NGLMEGRRK 274
            +++ G+   + + F+++  K  +++ N ++ G  K
Sbjct: 650 MYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAK 685


>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
 gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
          Length = 899

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 281/901 (31%), Positives = 456/901 (50%), Gaps = 87/901 (9%)

Query: 86  RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
           RYA  S+L+ C E        G  VH  +L S    +  + N LI MY  C    D A  
Sbjct: 28  RYA--SLLQKCTE--QKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLED-ALE 82

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           +FE +   ++ SW ++I+ Y++ G    V  LF +MQ +G     KP+ + F +++TA  
Sbjct: 83  VFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDG----TKPDAFVFSTVLTACS 138

Query: 206 SS-VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS 264
           S+  L+    +     +   AG+ + + VG+A+V+ + + G  + A+ +FE++ ++N+VS
Sbjct: 139 SAGALNEGKAIHDCAVL---AGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVS 194

Query: 265 MNGLMEGR------------------------------------------RKGKEVHGYL 282
            N L+                                              +GK  H  +
Sbjct: 195 WNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERI 254

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
           IR+G    + VGN LVNMY KCG++D +R VF  M  ++ VSW  MI    Q G    A 
Sbjct: 255 IRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAA- 313

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
             F   +R     +  + ++ + SC     +   +QIH   +  G DSD  +   L+++Y
Sbjct: 314 --FDLYKRMDCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMY 371

Query: 403 ADAGYLSRCLKVFFLMPE--HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
              G +     +F  + E  ++ V+WN++I   A       +A++ +  M   G  PN V
Sbjct: 372 GKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQ-HGESKQALECFWKMELEGVRPNSV 430

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
           T++  L A SS +    G Q+HA+++  N+ +E  + NA+++ YGKCG +D+    FA+M
Sbjct: 431 TYLASLEACSSLNDLTRGRQLHARILLENI-HEANLSNAVINMYGKCGSLDEAMDEFAKM 489

Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
            ER D VSWN+MI+ Y  +    +A+     M   G   D  T+   + AC SV +L  G
Sbjct: 490 PER-DVVSWNTMIATYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALG 548

Query: 581 MEVHACGVRA--CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
             +H+    A  CLE D  + +ALV MY++CG +  A   F     RN+ +W+++I+  A
Sbjct: 549 KTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACA 608

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
           +HG  ++AL LF +M+L G  PD +TF  +++ACS  G+V +G  +F SM + Y +    
Sbjct: 609 QHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGVFYFVSMVEDYSIPASE 668

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
           + F  MVDLLGRAG L++ E+ + K    P +L    +LGAC        E G + A   
Sbjct: 669 DHFGGMVDLLGRAGWLEEAEQVMRK---NPCALAHAVLLGACHVHG--DVERGIRIAQSA 723

Query: 759 FEMEPQNAVNY----VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC-SWVTMKDGVH 813
            E++ +N+ ++     +LA +Y + G+WED A+ RKA++    ++E G  SW+ +K+ VH
Sbjct: 724 LELDWKNSASFAASMAMLAELYGAAGRWEDAARVRKAVESRNARREPGGRSWIEVKNRVH 783

Query: 814 VFVAGDE--SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
            F   D+    P  D I  +L+ L+    + G + + + A   +       L   HSEK+
Sbjct: 784 EFGEDDDRLQGPRLDKIRGELQRLSSLAVEEGGICKDENARAHI-------LGCCHSEKV 836

Query: 872 AVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF-NDGKCS 929
           A+ F +++  +   IRI+KNLR C DCH+  KF+S+ + REI +RD    H F  +G CS
Sbjct: 837 AIGFGIVSTPAGQLIRIVKNLRACHDCHAFAKFVSRRIQREISVRDPYGLHCFQTNGSCS 896

Query: 930 C 930
           C
Sbjct: 897 C 897



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 142/547 (25%), Positives = 254/547 (46%), Gaps = 69/547 (12%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N ++N+Y + G +  A  +F+ +P+RN VSW  +++     G   +A ++F  M   G +
Sbjct: 165 NAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSV 224

Query: 84  -LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG--LVSNVLIAMYGSCLEST 140
             N     SV+ AC          G   H  ++++   FD    V N L+ MYG C  S 
Sbjct: 225 RPNDATFVSVVDACSNL--LDLPRGKSTHERIIRTG--FDSYLFVGNSLVNMYGKC-GSV 279

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
           D AR +FE++ +R+++SW  +I  Y+Q+G   + F L+ RM  E       PN  TF   
Sbjct: 280 DRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCE-------PNAVTF--- 329

Query: 201 ITAAYSSVLSGSYL--LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
             A   S L    L   +QI A +  +G  SD  +   LV+ + + G+   A  IFE + 
Sbjct: 330 -MAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLK 388

Query: 259 QK--NVVSMNGL---------------------MEGRR--------------------KG 275
           ++  N V+ N +                     +EG R                    +G
Sbjct: 389 ERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLNDLTRG 448

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           +++H  ++   + +   + N ++NMY KCG++D++   F  M  +D VSWNTMI+   Q+
Sbjct: 449 RQLHARILLENIHE-ANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQH 507

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG--EGLKLGLDSDVS 393
           G   +A+  F  M  +G  +   + +  + +C S+  + LG+ IH         L+ D  
Sbjct: 508 GSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPG 567

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V+ AL+++YA  G L     VF+     + V+W+++I A A      +EA+  + +M+  
Sbjct: 568 VATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACA-QHGRENEALDLFREMQLQ 626

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDD 512
           G  P+ +TF  ++AA S   + K G      +++ Y++         ++   G+ G +++
Sbjct: 627 GTKPDALTFSTLVAACSRRGVVKDGVFYFVSMVEDYSIPASEDHFGGMVDLLGRAGWLEE 686

Query: 513 CEKIFAR 519
            E++  +
Sbjct: 687 AEQVMRK 693



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 213/499 (42%), Gaps = 55/499 (11%)

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           ++++  S     + ++L   +       G  VH  ++         I+N L+  Y KCG 
Sbjct: 17  LKKSSESLQPARYASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGC 76

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           ++D  ++F  +    +  SW ++I+ Y     L + + L   M   G + D F F+TVL+
Sbjct: 77  LEDALEVF-ELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLT 135

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           AC+S   L  G  +H C V A +E  VV G+A+V++Y KCGR+  A   F+ +P RN+ S
Sbjct: 136 ACSSAGALNEGKAIHDCAVLAGMETQVV-GNAIVNLYGKCGRVHEAKAVFERLPERNLVS 194

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACS-----------HAGL 677
           WN++I+  A++GH   A+ +F  M LDG + P+  TFV V+ ACS           H  +
Sbjct: 195 WNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERI 254

Query: 678 VDEGFKHF----KSMSQVYGLIPQLEQ---------------FSCMVDLLGRAGELDKIE 718
           +  GF  +     S+  +YG    +++               ++ M+    + G +    
Sbjct: 255 IRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAF 314

Query: 719 EFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA---ANMLFEMEPQNAVNYVLLANM 775
           +   +M   PN++ +  V+ +C R      +L R     A+M+      +AV  V L  M
Sbjct: 315 DLYKRMDCEPNAVTFMAVMDSCLRPE----DLPRAEQIHAHMVASGFDSDAVLQVCLVTM 370

Query: 776 YASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKEL 835
           Y   G  +      + +KE   +     +W  M       ++G   H E     ++  E 
Sbjct: 371 YGKCGSVDSAWSIFENLKE---RSNNAVTWNAM-------ISGLAQHGES----KQALEC 416

Query: 836 NQKMRDAGYVPQTKFALFDLEP-ESKEDLVSYHSEKIAVAFVLTRNSKLPIRIMKNLRVC 894
             KM   G  P +   L  LE   S  DL         +       + L   ++     C
Sbjct: 417 FWKMELEGVRPNSVTYLASLEACSSLNDLTRGRQLHARILLENIHEANLSNAVINMYGKC 476

Query: 895 GDCHSAFKFISKIVGREIV 913
           G    A    +K+  R++V
Sbjct: 477 GSLDEAMDEFAKMPERDVV 495



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 189/419 (45%), Gaps = 62/419 (14%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H +I++ GF   +F+ N+L+N+Y + G +  A  +F++M  RN VSW  ++  Y  +
Sbjct: 248 KSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQ 307

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G    A  ++K M       N     +V+ +C    P       Q+H  ++ S    D +
Sbjct: 308 GFIRAAFDLYKRM---DCEPNAVTFMAVMDSCLR--PEDLPRAEQIHAHMVASGFDSDAV 362

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETR--DLISWNSIISVYSQRGDTISVFKLFSRMQ 182
           +   L+ MYG C  S D A  IFE ++ R  + ++WN++IS  +Q G++    + F +M+
Sbjct: 363 LQVCLVTMYGKC-GSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKME 421

Query: 183 REGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
            EG R    PN  T+ + + A  S   +  G  L  +IL        LS+     A+++ 
Sbjct: 422 LEGVR----PNSVTYLASLEACSSLNDLTRGRQLHARILLENIHEANLSN-----AVINM 472

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLM-------EGRRK------------------- 274
           + + G+   A   F +M +++VVS N ++        GR+                    
Sbjct: 473 YGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQMDLEGWTTDRATY 532

Query: 275 ---------------GKEVHGYLIRSG--LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                          GK +H  +  +   L     V   LV MYA+CG++ D++SVF   
Sbjct: 533 LGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRS 592

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
             ++ V+W+ +I+   Q+G   EA+  F  M+  G      +  + +++C+  G +  G
Sbjct: 593 HSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDG 651



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 94/385 (24%), Positives = 173/385 (44%), Gaps = 48/385 (12%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR--NSVSWACIVSGY 61
           A+  H  ++  GF  D  L   L+ +Y + G + SA  +F+ + +R  N+V+W  ++SG 
Sbjct: 345 AEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGL 404

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G S +A + F +M   G   N     + L AC     +    G Q+H  +L  N   
Sbjct: 405 AQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSL--NDLTRGRQLHARILLEN-IH 461

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  +SN +I MYG C  S D A   F ++  RD++SWN++I+ Y+Q G      + F +M
Sbjct: 462 EANLSNAVINMYGKC-GSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQM 520

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG--LLSDLYVGSALVS 239
             EG+      +  T+   I A  S  +    L + I ++V  A   L  D  V +ALV+
Sbjct: 521 DLEGW----TTDRATYLGAIDACGS--VPSLALGKTIHSIVATAAPCLEQDPGVATALVT 574

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVN 299
            +AR G+ + A+ +F +   +N+V+ + L+                              
Sbjct: 575 MYARCGSLHDAKSVFWRSHSRNLVTWSNLIAA---------------------------- 606

Query: 300 MYAKCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD-GLM 354
             A+ G  +++  +FR M       D+++++T+++   + G  ++ +  F +M  D  + 
Sbjct: 607 -CAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGVFYFVSMVEDYSIP 665

Query: 355 SSNFSLISTLSSCASLGWIMLGQQI 379
           +S       +      GW+   +Q+
Sbjct: 666 ASEDHFGGMVDLLGRAGWLEEAEQV 690


>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
 gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
          Length = 713

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 232/667 (34%), Positives = 381/667 (57%), Gaps = 13/667 (1%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
           +++H  +    L     +GN LV+ Y+K G++  ++  F  +   ++ SWN +++   QN
Sbjct: 52  RKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQN 111

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
           G    A   F  M   G+  +  +L + L +C +   + LG++++       L+ D  V 
Sbjct: 112 GHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVE 171

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           ++L+++Y     +    + F   PE D V W ++I A+A +    S A++    M   G 
Sbjct: 172 SSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWR-TSRALELVRRMDLEGI 230

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI-ENALLSCYGKCGEMDDCE 514
                T++++L A +S    + G   H +     +   +T+    L++ YGKCG +DD  
Sbjct: 231 KLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDAR 290

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
           ++   M  R   VSW +MI+ Y  N    +A+NL   M   G      T  +V+ +CA +
Sbjct: 291 RVLDAMPVR-TSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVL 349

Query: 575 ATLERGMEVHACGVRACLEFD--VVIGSALVDMYSKCGRIDYASRFFDLMPVR--NVYSW 630
            TL  G  +HA  +R+   F   +++ +A++ MY KCG ++ A   F+ +P+R  +V +W
Sbjct: 350 GTLSLGKRIHA-RIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTW 408

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
            +MI  YA++G G++A+ LF +M +DG   P+ VTF+ VL ACSH G +++ ++HF SM 
Sbjct: 409 TAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMG 468

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP-ITPNSLIWRTVLGACCRANCRKT 748
             +G+ P  + + C+VDLLGRAG L + E+ + +      + + W   L AC        
Sbjct: 469 PDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNG--DL 526

Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
           E  ++AA  + E+EP+N    VLL+N+YA+ G+  DVA+ R  MK + VKK AG SW+ +
Sbjct: 527 ERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEI 586

Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
            + VH F+  D SHP K  IY +L+ L++++++AGYVP TK  L D++ E K  L+ YHS
Sbjct: 587 NNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHS 646

Query: 869 EKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGK 927
           E++A+A  +++      +R++KNLRVC DCH+A KFIS+IVGR+I++RD++RFHHF DG 
Sbjct: 647 ERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGV 706

Query: 928 CSCGDYW 934
           CSCGDYW
Sbjct: 707 CSCGDYW 713



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 217/500 (43%), Gaps = 63/500 (12%)

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
           +N YA  S+L  C+     G     ++H  +       +  + NVL+  Y S   S   A
Sbjct: 35  INDYA--SLLWQCR-----GLDEVRKLHAQIAARKLDRNTFLGNVLVDAY-SKHGSLHGA 86

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           +  F  I   +  SWN +++ Y+Q G       LF  M  +G R    PN  T  + + A
Sbjct: 87  QLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVR----PNAVTLSTALLA 142

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
             ++      L +++  ++    L  D +V S+L++ + R      A + F++  +K+VV
Sbjct: 143 CTAA--RNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVV 200

Query: 264 SMNGL---------------------MEGRRKGKEVHGYL---------IRSGL-FDMVA 292
               +                     +EG + G   +  L         +R+G+ F   A
Sbjct: 201 CWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRA 260

Query: 293 VGNG-----------LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
              G           LVN+Y KCG +DD+R V   M  + SVSW  MI+   QNG   EA
Sbjct: 261 AAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEA 320

Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE-GLKLGLDSDVSVSNALLS 400
           I  F  M  +G   S+ +LIS + SCA LG + LG++IH            + + NA+++
Sbjct: 321 INLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVIT 380

Query: 401 LYADAGYLSRCLKVFFLMPEHDQ--VSWNSVIGAFADSEALVSEAVKYYLDMR-RAGWSP 457
           +Y   G L    +VF  +P   +  V+W ++I A+A +  +  EA++ + +M    G  P
Sbjct: 381 MYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQN-GVGEEAIELFQEMLIDGGTEP 439

Query: 458 NGVTFINILAAASSF-SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           N VTF+++L A S    + +      +    + V         L+   G+ G + + EK+
Sbjct: 440 NRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKL 499

Query: 517 FARMSE-RRDEVSWNSMISG 535
             R  +   D V W + +S 
Sbjct: 500 LLRHKDFEADVVCWIAFLSA 519



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 157/349 (44%), Gaps = 45/349 (12%)

Query: 11  ILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEA 70
           I       D  + ++LI +Y R  ++  A + FD  P+++ V W  ++S Y H   ++ A
Sbjct: 159 IASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRA 218

Query: 71  CKMFKEMVRAGFLLNRYALGSVLRACQECGP--SGFKFGMQVHCLVLKSNQTFDGLVSNV 128
            ++ + M   G  L      S+L AC       +G  F  +   + L  + T   +V+  
Sbjct: 219 LELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSST---VVAGT 275

Query: 129 LIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRY 188
           L+ +YG C    D ARR+ + +  R  +SW ++I+ Y+Q G+      LF  M  EG   
Sbjct: 276 LVNLYGKCGRVDD-ARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEG--- 331

Query: 189 SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD-LYVGSALVSGFARLGNF 247
             +P++ T  S++ +   +VL    L ++I A ++ +   S  L + +A+++ + + GN 
Sbjct: 332 -AEPSDITLISVVDSC--AVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNL 388

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
             AR++FE +  +                       RS     V     ++  YA+ G  
Sbjct: 389 ELAREVFECVPLRT----------------------RS-----VVTWTAMIRAYAQNGVG 421

Query: 308 DDSRSVFRFMI-----GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           +++  +F+ M+       + V++ +++      G  E+A  +FC+M  D
Sbjct: 422 EEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPD 470



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 7/177 (3%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +A++L  C     L+   ++HA      L+ +  +G+ LVD YSK G +  A   F  + 
Sbjct: 38  YASLLWQCRG---LDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRIT 94

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
           + N +SWN +++ YA++GH   A TLF  M   G  P+ VT    L AC+ A  +  G K
Sbjct: 95  LHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRK 154

Query: 684 HFKSM-SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
             + + S+   +   +E  S ++ + GR  E+++ E   ++ P   + + W  ++ A
Sbjct: 155 LNELIASEALEIDSHVE--SSLITMYGRCREIEEAERAFDRSP-EKDVVCWTAMISA 208



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 39/210 (18%)

Query: 16  FAYDVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVSGYTHKGMSNEACKM 73
           F+  + L N +I +Y + G+L  A ++F+ +P   R+ V+W  ++  Y   G+  EA ++
Sbjct: 368 FSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIEL 427

Query: 74  FKEM-VRAGFLLNRYALGSVLRACQECG----------PSGFKFGMQVH-----CLV--- 114
           F+EM +  G   NR    SVL AC   G            G  FG+        CLV   
Sbjct: 428 FQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLL 487

Query: 115 ------------LKSNQTFDGLVSNVLIAMYGSC-----LESTDCARRIFEEIETRDLIS 157
                       L  ++ F+  V    IA   +C     LE +  A +   E+E  ++  
Sbjct: 488 GRAGRLGEAEKLLLRHKDFEADVV-CWIAFLSACQMNGDLERSQRAAKRVSELEPENVAG 546

Query: 158 WNSIISVYSQRGDTISVFKLFSRMQREGFR 187
              + +VY+ +G    V ++ + M+  G +
Sbjct: 547 RVLLSNVYAAKGRRADVARIRNEMKSSGVK 576


>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
          Length = 1100

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/562 (39%), Positives = 320/562 (56%), Gaps = 9/562 (1%)

Query: 376  GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
            G+Q+H   LKL   ++  V  +LLSLYA  G L R  +VF  MP    V W ++I A+ D
Sbjct: 545  GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMD 604

Query: 436  SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
            +  L  EAV    +    G  P+  T + +L A +  +    G  V     +  VA    
Sbjct: 605  AGDL-REAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVF 663

Query: 496  IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
            +  A +  Y KCGEM    ++F +M   +D V+W +M+ GY  N    +A++L   M   
Sbjct: 664  VATAAVDLYVKCGEMAKAREVFDKM-RHKDAVAWGAMVGGYASNGHPREALDLFLAMQAE 722

Query: 556  GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF--DVVIGSALVDMYSKCGRID 613
            G + D +  A  LSAC  +  L+ G +  A  +    EF  + V+G+AL+DMY+KCG   
Sbjct: 723  GMKPDCYAVAGALSACTRLGALDLGRQ--AIRMVDWDEFLDNPVLGTALIDMYAKCGSTV 780

Query: 614  YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
             A   F  M  +++  WN+MI G    GH   A  L  QM+  G   +  TF+G+L +C+
Sbjct: 781  EAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCT 840

Query: 674  HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
            H GL+ +G ++F +M+++Y + P++E + CMVDLL RAG L +  + ++ MP+  N++I 
Sbjct: 841  HTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVIL 900

Query: 734  RTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMK 793
              +LG C     R TEL       L  +EP N+ NYV+L+N+Y++ G+WED AK R  MK
Sbjct: 901  GALLGGC--KIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMK 958

Query: 794  EAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALF 853
               V+K   CSWV  +  VH F  GD+SHP  D IY+KL EL  +M+  GY P T+  +F
Sbjct: 959  AKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMF 1018

Query: 854  DLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREI 912
            D+E E KE  + +HSEK+A+AF +L       IR+ KNLRVC DCH+A K +S+I  REI
Sbjct: 1019 DVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREI 1078

Query: 913  VLRDSNRFHHFNDGKCSCGDYW 934
            ++RD+NRFH F DG CSC DYW
Sbjct: 1079 IVRDNNRFHCFRDGSCSCNDYW 1100



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 174/397 (43%), Gaps = 4/397 (1%)

Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
           S + L    R G+++H   ++        V   L+++YAKCG +  ++ VF  M    +V
Sbjct: 534 SASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTV 593

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
            W  +I+     G   EA+        +G+   +F+ +  L++CA +  +  G+ +    
Sbjct: 594 PWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAA 653

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
            + G+   V V+ A + LY   G +++  +VF  M   D V+W +++G +A S     EA
Sbjct: 654 EQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYA-SNGHPREA 712

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           +  +L M+  G  P+       L+A +      LG Q    V      +   +  AL+  
Sbjct: 713 LDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDM 772

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           Y KCG   +   +F +M  ++D + WN+MI G         A  LV  M + G +L+  T
Sbjct: 773 YAKCGSTVEAWVVFQQM-RKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNT 831

Query: 564 FATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           F  +L +C     ++ G    H       +   +     +VD+ S+ G +  A +  D M
Sbjct: 832 FIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDM 891

Query: 623 PVR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
           P+  N     +++ G   H + + A  +  Q+ L  P
Sbjct: 892 PMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEP 928



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 164/383 (42%), Gaps = 29/383 (7%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H + LK     +  +  +L+++Y + G L  A ++FDEMP  ++V W  +++ Y   G 
Sbjct: 548 LHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGD 607

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA  + +     G   + +    VL AC     +    G  V     +        V+
Sbjct: 608 LREAVHVARNAFANGMRPDSFTAVRVLTACARI--ADLATGETVWRAAEQEGVAQSVFVA 665

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
              + +Y  C E    AR +F+++  +D ++W +++  Y+  G       LF  MQ EG 
Sbjct: 666 TAAVDLYVKCGEMAK-AREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEG- 723

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              +KP+ Y     ++A   + L    L +Q + MV     L +  +G+AL+  +A+ G+
Sbjct: 724 ---MKPDCYAVAGALSA--CTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGS 778

Query: 247 FYYARKIFEQMIQKNVVSMNGL-----MEGRRK-GKEVHGYLIRSGLFDMVAVGNGLVNM 300
              A  +F+QM +K+++  N +     M G  K    + G + +SG+        GL+  
Sbjct: 779 TVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCS 838

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
               G I D R  F  M     +S       ++  GC  +       + R GL+     L
Sbjct: 839 CTHTGLIQDGRRYFHNMTKLYHIS-----PRIEHYGCMVD------LLSRAGLLQEAHQL 887

Query: 361 ISTLSSCAS---LGWIMLGQQIH 380
           +  +   A+   LG ++ G +IH
Sbjct: 888 VDDMPMPANAVILGALLGGCKIH 910



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 2/165 (1%)

Query: 561 HFTFATVLSACASVA-TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           H T    L + + +   L  G ++HA  ++     +  + ++L+ +Y+KCG +  A R F
Sbjct: 525 HLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVF 584

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           D MP  +   W ++I+ Y   G   +A+ +      +G  PD  T V VL+AC+    + 
Sbjct: 585 DEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLA 644

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
            G   +++  Q  G+   +   +  VDL  + GE+ K  E  +KM
Sbjct: 645 TGETVWRAAEQ-EGVAQSVFVATAAVDLYVKCGEMAKAREVFDKM 688


>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
 gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
          Length = 1124

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/562 (39%), Positives = 320/562 (56%), Gaps = 9/562 (1%)

Query: 376  GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
            G+Q+H   LKL   ++  V  +LLSLYA  G L R  +VF  MP    V W ++I A+ D
Sbjct: 569  GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMD 628

Query: 436  SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
            +  L  EAV    +    G  P+  T + +L A +  +    G  V     +  VA    
Sbjct: 629  AGDL-REAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVF 687

Query: 496  IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
            +  A +  Y KCGEM    ++F +M   +D V+W +M+ GY  N    +A++L   M   
Sbjct: 688  VATAAVDLYVKCGEMAKAREVFDKM-RHKDAVAWGAMVGGYASNGHPREALDLFLAMQAE 746

Query: 556  GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF--DVVIGSALVDMYSKCGRID 613
            G + D +  A  LSAC  +  L+ G +  A  +    EF  + V+G+AL+DMY+KCG   
Sbjct: 747  GMKPDCYAVAGALSACTRLGALDLGRQ--AIRMVDWDEFLDNPVLGTALIDMYAKCGSTV 804

Query: 614  YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
             A   F  M  +++  WN+MI G    GH   A  L  QM+  G   +  TF+G+L +C+
Sbjct: 805  EAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCT 864

Query: 674  HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
            H GL+ +G ++F +M+++Y + P++E + CMVDLL RAG L +  + ++ MP+  N++I 
Sbjct: 865  HTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVIL 924

Query: 734  RTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMK 793
              +LG C     R TEL       L  +EP N+ NYV+L+N+Y++ G+WED AK R  MK
Sbjct: 925  GALLGGC--KIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMK 982

Query: 794  EAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALF 853
               V+K   CSWV  +  VH F  GD+SHP  D IY+KL EL  +M+  GY P T+  +F
Sbjct: 983  AKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMF 1042

Query: 854  DLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREI 912
            D+E E KE  + +HSEK+A+AF +L       IR+ KNLRVC DCH+A K +S+I  REI
Sbjct: 1043 DVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREI 1102

Query: 913  VLRDSNRFHHFNDGKCSCGDYW 934
            ++RD+NRFH F DG CSC DYW
Sbjct: 1103 IVRDNNRFHCFRDGSCSCNDYW 1124



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 174/397 (43%), Gaps = 4/397 (1%)

Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
           S + L    R G+++H   ++        V   L+++YAKCG +  ++ VF  M    +V
Sbjct: 558 SASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTV 617

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
            W  +I+     G   EA+        +G+   +F+ +  L++CA +  +  G+ +    
Sbjct: 618 PWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAA 677

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
            + G+   V V+ A + LY   G +++  +VF  M   D V+W +++G +A S     EA
Sbjct: 678 EQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYA-SNGHPREA 736

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           +  +L M+  G  P+       L+A +      LG Q    V      +   +  AL+  
Sbjct: 737 LDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDM 796

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           Y KCG   +   +F +M  ++D + WN+MI G         A  LV  M + G +L+  T
Sbjct: 797 YAKCGSTVEAWVVFQQM-RKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNT 855

Query: 564 FATVLSACASVATLERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           F  +L +C     ++ G    H       +   +     +VD+ S+ G +  A +  D M
Sbjct: 856 FIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDM 915

Query: 623 PVR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
           P+  N     +++ G   H + + A  +  Q+ L  P
Sbjct: 916 PMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEP 952



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 164/383 (42%), Gaps = 29/383 (7%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H + LK     +  +  +L+++Y + G L  A ++FDEMP  ++V W  +++ Y   G 
Sbjct: 572 LHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGD 631

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA  + +     G   + +    VL AC     +    G  V     +        V+
Sbjct: 632 LREAVHVARNAFANGMRPDSFTAVRVLTACARI--ADLATGETVWRAAEQEGVAQSVFVA 689

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
              + +Y  C E    AR +F+++  +D ++W +++  Y+  G       LF  MQ EG 
Sbjct: 690 TAAVDLYVKCGEMAK-AREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEG- 747

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              +KP+ Y     ++A   + L    L +Q + MV     L +  +G+AL+  +A+ G+
Sbjct: 748 ---MKPDCYAVAGALSA--CTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGS 802

Query: 247 FYYARKIFEQMIQKNVVSMNGL-----MEGRRK-GKEVHGYLIRSGLFDMVAVGNGLVNM 300
              A  +F+QM +K+++  N +     M G  K    + G + +SG+        GL+  
Sbjct: 803 TVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCS 862

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
               G I D R  F  M     +S       ++  GC  +       + R GL+     L
Sbjct: 863 CTHTGLIQDGRRYFHNMTKLYHIS-----PRIEHYGCMVD------LLSRAGLLQEAHQL 911

Query: 361 ISTLSSCAS---LGWIMLGQQIH 380
           +  +   A+   LG ++ G +IH
Sbjct: 912 VDDMPMPANAVILGALLGGCKIH 934



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 2/165 (1%)

Query: 561 HFTFATVLSACASVA-TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           H T    L + + +   L  G ++HA  ++     +  + ++L+ +Y+KCG +  A R F
Sbjct: 549 HLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVF 608

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           D MP  +   W ++I+ Y   G   +A+ +      +G  PD  T V VL+AC+    + 
Sbjct: 609 DEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLA 668

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
            G   +++  Q  G+   +   +  VDL  + GE+ K  E  +KM
Sbjct: 669 TGETVWRAAEQ-EGVAQSVFVATAAVDLYVKCGEMAKAREVFDKM 712


>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/565 (40%), Positives = 334/565 (59%), Gaps = 14/565 (2%)

Query: 377 QQIHGEGLKLGL-----DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
           +QIH   ++ G+     D +  +  AL+SL A   + +   ++F  +   +  +WN++I 
Sbjct: 52  KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAA---QIFNQIQAPNIFTWNTMIR 108

Query: 432 AFADSEALVSEAVKYYLDMRRAG-WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
            FA+SE   S AV+ +  M  A    P+  TF  +  A +      LG  +H+ V++   
Sbjct: 109 GFAESEN-PSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGF 167

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
            +   ++N+L+  Y   G  +   ++F  MS  RD V+WNS+I+G+  N +  +A+ L  
Sbjct: 168 DSLRFVQNSLVHMYSVFGFAESAYQVFEIMS-YRDRVAWNSVINGFALNGMPNEALTLYR 226

Query: 551 FMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCG 610
            M   G   D FT  ++LSAC  +  L  G  VH   V+  L  +    +AL+D+YSKCG
Sbjct: 227 EMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCG 286

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
               A + FD M  R+V SW S+I G A +G G++AL LF +++  G  P  +TFVGVL 
Sbjct: 287 NFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLY 346

Query: 671 ACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNS 730
           ACSH G++DEGF +F+ M + YG++P++E   CMVDLL RAG++    ++I  MP+ PN+
Sbjct: 347 ACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNA 406

Query: 731 LIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARK 790
           +IWRT+LGAC        ELG  A   +  +E +++ ++VLL+N+YAS  +W DV   RK
Sbjct: 407 VIWRTLLGACTIHG--HLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRK 464

Query: 791 AMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKF 850
            M    VKK  G S V +K+ V+ F+ GD SHP+ +  Y  L ++ Q ++  GYVP+T  
Sbjct: 465 IMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVN 524

Query: 851 ALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVG 909
            L D+E E KE  +S+H+EK+A+AF+L       PIRIMKNLRVC DCH A K ISK+  
Sbjct: 525 VLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFE 584

Query: 910 REIVLRDSNRFHHFNDGKCSCGDYW 934
           REI++RD +RFHHF DG CSC DYW
Sbjct: 585 REIIVRDRSRFHHFKDGSCSCKDYW 609



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 171/368 (46%), Gaps = 18/368 (4%)

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
           R+ + P    F   +  A  S+ +      QI   ++      +++  + ++ GFA   N
Sbjct: 60  RHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAP----NIFTWNTMIRGFAESEN 115

Query: 247 FYYARKIFEQM-----IQKNVVSMNGLMEGRRK------GKEVHGYLIRSGLFDMVAVGN 295
              A ++F QM     I  +  +   L +   K      G+ +H  ++R+G   +  V N
Sbjct: 116 PSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQN 175

Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMS 355
            LV+MY+  G  + +  VF  M  +D V+WN++I+G   NG   EA+  +  M  +G+  
Sbjct: 176 SLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEP 235

Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
             F+++S LS+C  LG + LG+++H   +K+GL  +   SNALL LY+  G      KVF
Sbjct: 236 DGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVF 295

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
             M E   VSW S+I   A    L +EA+K + ++ R G  P+ +TF+ +L A S   M 
Sbjct: 296 DEMEERSVVSWTSLIVGLA-VNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGML 354

Query: 476 KLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
             G     ++  +Y +         ++    + G++ D       M    + V W +++ 
Sbjct: 355 DEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLG 414

Query: 535 G-YIHNEL 541
              IH  L
Sbjct: 415 ACTIHGHL 422



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 108/196 (55%), Gaps = 7/196 (3%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++++GF    F+ N+L+++Y   G   SA ++F+ M  R+ V+W  +++G+   GM 
Sbjct: 159 HSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMP 218

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           NEA  +++EM   G   + + + S+L AC E G      G +VH  ++K     +   SN
Sbjct: 219 NEALTLYREMGSEGVEPDGFTMVSLLSACVELG--ALALGERVHMYMVKVGLVQNQHASN 276

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ +Y  C    D A+++F+E+E R ++SW S+I   +  G      KLF  ++R+G  
Sbjct: 277 ALLDLYSKCGNFRD-AQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQG-- 333

Query: 188 YSLKPNEYTFGSLITA 203
             LKP+E TF  ++ A
Sbjct: 334 --LKPSEITFVGVLYA 347



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 167/396 (42%), Gaps = 62/396 (15%)

Query: 89  LGSVLRAC----QECGPSGFKFGMQVHCLVLK-----SNQTFDGLVSNVLIAMYGSCLES 139
           L  +LR C    Q CG S  K   Q+H   ++      N  F+  +   L+++       
Sbjct: 30  LSFILRKCISLVQLCGSSQSKLK-QIHAFSIRHGVPPQNPDFNKHLIFALVSLSAP---- 84

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
              A +IF +I+  ++ +WN++I  +++  +     +LFS+M       S+ P+ +TF  
Sbjct: 85  MSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAAS---SILPDTHTFPF 141

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           L  A   + L    L + I ++V + G  S  +V ++LV  ++  G    A ++FE M  
Sbjct: 142 LFKAV--AKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSY 199

Query: 260 KNVVSMNGLMEG--------------RRKGKE---------------------------V 278
           ++ V+ N ++ G              R  G E                           V
Sbjct: 200 RDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERV 259

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H Y+++ GL       N L+++Y+KCG   D++ VF  M  +  VSW ++I GL  NG  
Sbjct: 260 HMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLG 319

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNA 397
            EA+  F  + R GL  S  + +  L +C+  G +  G         + G+   +     
Sbjct: 320 NEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGC 379

Query: 398 LLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           ++ L   AG +         MP   + V W +++GA
Sbjct: 380 MVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGA 415



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 2/101 (1%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H+ ++K G   +    N L+++Y + G+   A K+FDEM +R+ VSW  ++ G    G+ 
Sbjct: 260 HMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLG 319

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKF 106
           NEA K+F E+ R G   +      VL AC  CG    GF +
Sbjct: 320 NEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNY 360


>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
          Length = 1008

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 245/840 (29%), Positives = 438/840 (52%), Gaps = 58/840 (6%)

Query: 8    HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
            H  +L+  F  ++ +   L++ Y + G +  A  + D++   + V+W  ++SGY+  G  
Sbjct: 178  HCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFD 237

Query: 68   NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
             E  ++ +++   G   N     S++  C          G  +H  V+KS  + D  ++ 
Sbjct: 238  KEVFEVLRQINEMGLKPNVSTFASIIPLCTRM--KCLDIGKSIHGFVVKSGFSSDEFLTP 295

Query: 128  VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
             LI+MY     +   AR +F+    ++++ WNS+IS Y+Q   +   FK+F +M     +
Sbjct: 296  ALISMYAGG-GNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQM----LK 350

Query: 188  YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             +++PN  TF S+I    +S  +  +  + + A V K  L S L V +AL+S +A+LG+ 
Sbjct: 351  ANMQPNVVTFVSIIPCCENS--ANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDL 408

Query: 248  YYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------------- 274
              A  IF QM ++N++S N ++ G                                    
Sbjct: 409  NSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSAC 468

Query: 275  --------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                    GK  H +  R      + + N L+  Y+ CG +  S  +F+ M  ++++SWN
Sbjct: 469  SKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWN 528

Query: 327  TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            T+ISG   NG  ++A+     M+++ +     +LIS +  C     ++ G  +HG  +K 
Sbjct: 529  TLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKT 588

Query: 387  GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
            G   DVS+ NAL+S+Y + G ++    +F +MP    VSWN++I  +     L +E +  
Sbjct: 589  GFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGY-RFHYLQNEVMAS 647

Query: 447  YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
            +  M R G  PN VT +N+L +  +   GK    +HA  ++  V  ET I  +L+S Y +
Sbjct: 648  FCQMIREGQKPNYVTLLNLLPSCRTLLQGK---SIHAFAVRTGVIVETPIITSLISMYAR 704

Query: 507  CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
               ++    +F  M  + D   WN+++S Y+  +   +++     ++      D+ TF +
Sbjct: 705  FENINSFIFLF-EMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLS 763

Query: 567  VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
            ++SAC  +++L     V A  ++   +  +VI +AL+D++++CG I  A + F+ +  ++
Sbjct: 764  LISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKD 823

Query: 627  VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
              SW++MI+GY  HG  + AL L SQM+L G  PD +T+  VLSACSH G +D+G+  F 
Sbjct: 824  AVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFN 883

Query: 687  SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
            SM +  G+  ++E ++CMVDLLGR G+L++  +F+ K+P  P+  +  ++LGAC      
Sbjct: 884  SMVE-EGVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLGACIIHG-- 940

Query: 747  KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
              +LG K +++LFE++P+N+ +YV+L N+YA+ G+W D  + R  M+E +++K  G S V
Sbjct: 941  NVKLGEKISSLLFELDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGFSLV 1000



 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 183/693 (26%), Positives = 339/693 (48%), Gaps = 59/693 (8%)

Query: 87  YALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRI 146
           +    V++AC   G      G  VHC+VL+++   + ++   L+  Y         AR +
Sbjct: 156 FTFPFVIKACTALGAVWIAEG--VHCIVLRTSFEENLVIQTALVDFYAKTGRMVK-ARLV 212

Query: 147 FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS 206
            ++I   DL++WN++IS YS  G    VF++  ++   G    LKPN  TF S+I     
Sbjct: 213 LDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMG----LKPNVSTFASIIPLC-- 266

Query: 207 SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN 266
           + +    + + I   V K+G  SD ++  AL+S +A  GN + AR +F+   +KNVV  N
Sbjct: 267 TRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWN 326

Query: 267 GLMEGRRK-----------------------------------------GKEVHGYLIRS 285
            ++    +                                         GK +H ++++ 
Sbjct: 327 SMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKY 386

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
            L   ++V   L++MYAK G ++ +  +F  M  ++ +SWN+MISG   NG +E ++  F
Sbjct: 387 RLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAF 446

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
           C M+ +G      S+++ LS+C+ L  I+LG+  H    +   DS++++SNALL+ Y+D 
Sbjct: 447 CDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDC 506

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVI-GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
           G LS   K+F  MP  + +SWN++I G   + +    +AV     M++     + VT I+
Sbjct: 507 GKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDT--KKAVALLHKMQQEKMELDLVTLIS 564

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           I+           G  +H   IK   A + ++ NAL+S Y  CG+++  + +F  M   R
Sbjct: 565 IIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVM-PWR 623

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
             VSWN++I+GY  + L  + M     M++ GQ+ ++ T   +L +C    TL +G  +H
Sbjct: 624 SIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSC---RTLLQGKSIH 680

Query: 585 ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGD 644
           A  VR  +  +  I ++L+ MY++   I+     F++    ++  WN+++S Y +  +  
Sbjct: 681 AFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAK 740

Query: 645 KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCM 704
           +++T F ++      PD++TF+ ++SAC     ++        + Q  G    +   + +
Sbjct: 741 ESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQ-KGFDKHIVISNAL 799

Query: 705 VDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
           +DL  R G +   ++    +  + +++ W T++
Sbjct: 800 IDLFARCGNISIAKKIFEGLS-SKDAVSWSTMI 831



 Score =  251 bits (642), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 184/694 (26%), Positives = 338/694 (48%), Gaps = 59/694 (8%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  ++K GF+ D FL   LI++Y   G+L  A  LFD   ++N V W  ++S Y   
Sbjct: 276 KSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQN 335

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
             S+EA KMF++M++A    N     S++  C+    + F +G  +H  V+K        
Sbjct: 336 QKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCE--NSANFWYGKSLHAHVMKYRLDSQLS 393

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V+  L++MY   L   + A  IF ++  R+L+SWNS+IS Y   G   +    F  MQ E
Sbjct: 394 VATALLSMYAK-LGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFE 452

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           GF     P+  +  ++++A   S L    L +   A   +    S+L + +AL++ ++  
Sbjct: 453 GF----DPDAISIVNILSAC--SKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDC 506

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG--------------------------------- 271
           G    + K+F++M  +N +S N L+ G                                 
Sbjct: 507 GKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISII 566

Query: 272 --------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                     +G  +HGY I++G    V++ N L++MY  CG I+  + +F  M  +  V
Sbjct: 567 PICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIV 626

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SWN +I+G   +    E + +FC M R+G   +  +L++ L SC +L   + G+ IH   
Sbjct: 627 SWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSCRTL---LQGKSIHAFA 683

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           ++ G+  +  +  +L+S+YA    ++  + +F +  + D   WN+++  +  ++    E+
Sbjct: 684 VRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKN-AKES 742

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           V ++ ++  A   P+ +TF+++++A    S   L + V A VI+        I NAL+  
Sbjct: 743 VTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDL 802

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           + +CG +   +KIF  +S  +D VSW++MI+GY  +     A+ L+  M   G + D  T
Sbjct: 803 FARCGNISIAKKIFEGLSS-KDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGIT 861

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           +A+VLSAC+    +++G  +    V   +   +   + +VD+  + G+++ A  F + +P
Sbjct: 862 YASVLSACSHGGFIDQGWMIFNSMVEEGVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLP 921

Query: 624 VR-NVYSWNSMISGYARHGH---GDKALTLFSQM 653
            + +V    S++     HG+   G+K  +L  ++
Sbjct: 922 CKPSVSLLESLLGACIIHGNVKLGEKISSLLFEL 955



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 209/439 (47%), Gaps = 9/439 (2%)

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N MI  L  +G +E+ +  +   R  G  S +F+    + +C +LG + + + +H   L+
Sbjct: 124 NLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVLR 183

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
              + ++ +  AL+  YA  G + +   V   + + D V+WN++I  ++       E  +
Sbjct: 184 TSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYS-LNGFDKEVFE 242

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
               +   G  PN  TF +I+   +      +G  +H  V+K   +++  +  AL+S Y 
Sbjct: 243 VLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYA 302

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
             G +     +F   +E ++ V WNSMIS Y  N+   +A  +   M++   + +  TF 
Sbjct: 303 GGGNLFIARDLFDSAAE-KNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFV 361

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           +++  C + A    G  +HA  ++  L+  + + +AL+ MY+K G ++ A   F  MP R
Sbjct: 362 SIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRR 421

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
           N+ SWNSMISGY  +G  + ++  F  M+ +G  PD ++ V +LSACS    +  G K  
Sbjct: 422 NLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLG-KAA 480

Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANC 745
            + S        L   + ++      G+L    +   KMP+  N++ W T++  C     
Sbjct: 481 HAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLR-NAISWNTLISGCVHNGD 539

Query: 746 RKTELGRKAANMLFEMEPQ 764
            K     KA  +L +M+ +
Sbjct: 540 TK-----KAVALLHKMQQE 553



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 227/511 (44%), Gaps = 61/511 (11%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H    +  F  ++ + N L+  Y   G L+S+ KLF +MP RN++SW  ++SG  H 
Sbjct: 478 KAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHN 537

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G + +A  +  +M +    L+   L S++  C+         GM +H   +K+    D  
Sbjct: 538 GDTKKAVALLHKMQQEKMELDLVTLISIIPICRVA--ENLIQGMTLHGYAIKTGFACDVS 595

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           + N LI+MY +C +  +  + +FE +  R ++SWN++I+ Y        V   F +M RE
Sbjct: 596 LVNALISMYFNCGD-INAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIRE 654

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G     KPN  T  +L+ +   ++L G    + I A   + G++ +  + ++L+S +AR 
Sbjct: 655 G----QKPNYVTLLNLLPSC-RTLLQG----KSIHAFAVRTGVIVETPIITSLISMYARF 705

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLME---GRRKGKE------------------------ 277
            N      +FE   ++++   N +M      +  KE                        
Sbjct: 706 ENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLI 765

Query: 278 --------------VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                         V  Y+I+ G    + + N L++++A+CG I  ++ +F  +  KD+V
Sbjct: 766 SACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAV 825

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           SW+TMI+G   +G  E A+     MR  G+     +  S LS+C+  G+I  G  I    
Sbjct: 826 SWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSM 885

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA-FADSEALVS 441
           ++ G+   +     ++ L    G L+        +P    VS   S++GA        + 
Sbjct: 886 VEEGVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLGACIIHGNVKLG 945

Query: 442 EAVK---YYLDMRRAGWSPNGVTFINILAAA 469
           E +    + LD + +G   + V   NI AAA
Sbjct: 946 EKISSLLFELDPKNSG---SYVMLYNIYAAA 973



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 15/217 (6%)

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           D FTF  V+ AC ++  +     VH   +R   E ++VI +ALVD Y+K GR+  A    
Sbjct: 154 DDFTFPFVIKACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVL 213

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           D +   ++ +WN++ISGY+ +G   +   +  Q+   G  P+  TF  ++  C+    +D
Sbjct: 214 DKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLD 273

Query: 680 -----EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWR 734
                 GF      S    L P L      + +    G L    +  +      N +IW 
Sbjct: 274 IGKSIHGFVVKSGFSSDEFLTPAL------ISMYAGGGNLFIARDLFDSAA-EKNVVIWN 326

Query: 735 TVLGACCRANCRKTELGRKAANML-FEMEPQNAVNYV 770
           +++ A  + N + +E  +    ML   M+P N V +V
Sbjct: 327 SMISAYAQ-NQKSSEAFKMFQQMLKANMQP-NVVTFV 361


>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 224/600 (37%), Positives = 337/600 (56%), Gaps = 39/600 (6%)

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
           +I LGQQ H + +  GL  +  ++  ++++YA +G L   + VF  +     + +NS+I 
Sbjct: 92  FIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIR 151

Query: 432 AFA--DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           A+            ++ Y  M   G   +  T   +L + +  S   +G  VH Q ++  
Sbjct: 152 AYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVG 211

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARM----------------------------- 520
           +  +  +  +L+  Y KCG + D  K+F +M                             
Sbjct: 212 LEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFE 271

Query: 521 -SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL--DHFTFATVLSACASVATL 577
             E R+ VSW +MISGY  N    +A+ L   M+Q G  +  +  T  +VL ACA  A L
Sbjct: 272 RMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAAL 331

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV--RNVYSWNSMIS 635
           ERG  +H       L  +  + +AL  MY+KC  +  A   FD++    +N+ +WN+MI+
Sbjct: 332 ERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMIT 391

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
            YA HG G +A+++F  M   G  PD VTF+G+LS CSH+GL+D G  HF  M  ++ + 
Sbjct: 392 AYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVE 451

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           P++E ++C+VDLLGRAG L + +E I++MP+     +W  +L A CR++ R  E+   AA
Sbjct: 452 PRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAA-CRSH-RNLEIAELAA 509

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
             LF +EP N+ NYVLL+N+YA  G WE+V K R  +K   +KK  GCSW+ +    H+F
Sbjct: 510 RRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLF 569

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
           +  D+SHP+   IY+ L+ L +K++ AGY+P T F L D+  E KE  ++ HSEK+A+AF
Sbjct: 570 MGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAF 629

Query: 876 -VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            +L     + +R+ KNLR+CGDCH+A KFISKI  REI++RD NRFH F DG CSCGDYW
Sbjct: 630 GLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 689



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/427 (23%), Positives = 192/427 (44%), Gaps = 47/427 (11%)

Query: 252 KIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
            IF+ + + N + +         G++ H  ++  GL     +   +V MYA  G +D + 
Sbjct: 82  PIFQFLTRHNFIKL---------GQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAV 132

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD---GLMSSNFSLISTLSSCA 368
            VF  +    S+ +N++I    ++G          A  R    GL+  NF+L   L SCA
Sbjct: 133 VVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCA 192

Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
            L  + +G+ +HG+GL++GL+ D  V  +L+ +Y   G +    K+F  M   D  SWN+
Sbjct: 193 DLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNA 252

Query: 429 VI-GAFADSEALVSEAVKYYLDMRR-AGWS------------------------------ 456
           +I G   + E  V+E +   ++ R    W+                              
Sbjct: 253 LIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMK 312

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           PN VT +++L A +  +  + G ++H       +   ++++ AL   Y KC  + +    
Sbjct: 313 PNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCC 372

Query: 517 FARMSER-RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           F  +++  ++ ++WN+MI+ Y  +    +A+++   M++ G + D  TF  +LS C+   
Sbjct: 373 FDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSG 432

Query: 576 TLERGM-EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSM 633
            ++ G+   +  G    +E  V   + +VD+  + GR+  A      MP++   S W ++
Sbjct: 433 LIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGAL 492

Query: 634 ISGYARH 640
           ++    H
Sbjct: 493 LAACRSH 499



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 119/482 (24%), Positives = 199/482 (41%), Gaps = 68/482 (14%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H QI+ HG   + FL   ++ +Y   GDL SA  +FD + + +S+ +  I+  YT  G  
Sbjct: 100 HAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXX 159

Query: 68  NEACKMFKEMVRA---GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
                  +   R    G L + + L  VL++C +   S    G  VH   L+     D  
Sbjct: 160 XXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADL--SRVCMGRCVHGQGLRVGLEGDFY 217

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V   LI MY  C    D AR++F+++  RD+ SWN++I+ Y + G+      LF RM+  
Sbjct: 218 VGASLIDMYVKCGVIGD-ARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHR 276

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                                                        ++   +A++SG+ + 
Sbjct: 277 ---------------------------------------------NIVSWTAMISGYTQN 291

Query: 245 GNFYYARKIFEQMIQ------KNVVSMNGLME------GRRKGKEVHGYLIRSGLFDMVA 292
           G    A  +F++M+Q       N V++  ++          +G+ +H +    GL    +
Sbjct: 292 GFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSS 351

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMI--GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           V   L  MYAKC ++ ++R  F  +   GK+ ++WNTMI+    +GC  EA+  F  M R
Sbjct: 352 VQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLR 411

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
            G+     + +  LS C+  G I  G    +  G    ++  V     ++ L   AG L 
Sbjct: 412 AGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLV 471

Query: 410 RCLKVFFLMPEHDQVS-WNSVIGAFADSEAL-VSEAVKYYLDMRRAGWSPNGVTFINILA 467
              ++   MP     S W +++ A      L ++E     L +     S N V   N+ A
Sbjct: 472 EAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYA 531

Query: 468 AA 469
            A
Sbjct: 532 EA 533



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 37/261 (14%)

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P+  ++  I    +  +  KLG Q HAQ++ + +     +   +++ Y   G++D    +
Sbjct: 75  PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134

Query: 517 FARMSERRDEVSWNSMISGYI-HNELLPKAMNLVWF--MMQRGQRLDHFTFATVLSACAS 573
           F R+ +    + +NS+I  Y  H         L  +  M   G   D+FT   VL +CA 
Sbjct: 135 FDRI-DNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCAD 193

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV--------- 624
           ++ +  G  VH  G+R  LE D  +G++L+DMY KCG I  A + FD M V         
Sbjct: 194 LSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNAL 253

Query: 625 ----------------------RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP--LP 660
                                 RN+ SW +MISGY ++G  ++AL LF +M  DG    P
Sbjct: 254 IAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKP 313

Query: 661 DHVTFVGVLSACSHAGLVDEG 681
           + VT V VL AC+ +  ++ G
Sbjct: 314 NWVTIVSVLPACAQSAALERG 334



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 16/209 (7%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           KLF   I++     D+   N LI  Y++ G++  A  LF+ M  RN VSW  ++SGYT  
Sbjct: 237 KLFDKMIVR-----DMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQN 291

Query: 65  GMSNEACKMFKEMVRAGFLL--NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
           G + +A  +F EM++ G  +  N   + SVL AC +   +  + G ++H          +
Sbjct: 292 GFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQS--AALERGRRIHDFANGIGLHLN 349

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIET--RDLISWNSIISVYSQRGDTISVFKLFSR 180
             V   L  MY  C    + AR  F+ I    ++LI+WN++I+ Y+  G  +    +F  
Sbjct: 350 SSVQTALAGMYAKCYSLVE-ARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFEN 408

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVL 209
           M R G    ++P+  TF  L++    S L
Sbjct: 409 MLRAG----VQPDAVTFMGLLSGCSHSGL 433


>gi|41469322|gb|AAS07178.1| putative pentatricopeptide repeat containing protein [Oryza sativa
           Japonica Group]
 gi|108709518|gb|ABF97313.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 654

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 231/593 (38%), Positives = 336/593 (56%), Gaps = 17/593 (2%)

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK---LGLDSDVSVSNALLSLYADAGYL 408
            L+ +  S  S     +SLG   LG Q+H + +    LG D    ++ A+LS YA     
Sbjct: 69  ALLKAASSSASPPRRPSSLG---LGAQLHAQAVVRGFLGGDDSTILATAVLSFYASCREP 125

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG--WSPNGVTFINIL 466
               KVF  MP  + V+WN++I  +A +     EA+  + DM+R G   +P+  TF  +L
Sbjct: 126 DLARKVFDGMPRRNAVTWNALIKGYAQA-GRREEAILLFRDMKREGSHVAPDRYTFPALL 184

Query: 467 AA----ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
           +       S    +LG  +HA VIK  +  +  +  +L+S Y     ++D +  F ++  
Sbjct: 185 SGIGREGGSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGS 244

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
             D + W+SMIS Y++ E    A+ + + M+ +  +   F ++TV S C  +  LE G +
Sbjct: 245 S-DPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQ 303

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
           VHA  +++  E D  + +AL+ MYS CG I+ A + F      NV S+NSMIS   +HG+
Sbjct: 304 VHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGY 363

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
             +AL  F QMK  G +PD VT + ++S+ +HAGLV EG + F SM  + G+ P  + ++
Sbjct: 364 PKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYA 423

Query: 703 CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
           C+VD+L R+GE+ K  + IN+MP    + +WR VLGAC +   R  E G++ A MLFEME
Sbjct: 424 CVVDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKH--RDIETGKRIAEMLFEME 481

Query: 763 PQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESH 822
           P  A NY+LL N+YA  G+W +  K R  M E  V K+   SW+ M    + F   D SH
Sbjct: 482 PYEATNYILLGNIYARLGRWTEAEKVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDRSH 541

Query: 823 PEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNS 881
           P    IY  L  L   ++ AGYVP   FA  +++ + KE+ + YH EK+A AF  L   S
Sbjct: 542 PISREIYRNLDRLISTIKVAGYVPDISFAAHNIQRDRKEESLYYHCEKLAFAFGDLAAPS 601

Query: 882 KLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
              +RIMKNLRVCGDCH A+K+ S + GREI+LRD+ RFHHFN G CSCGDYW
Sbjct: 602 GGTLRIMKNLRVCGDCHCAYKYFSLVTGREIILRDNQRFHHFNSGFCSCGDYW 654



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 176/382 (46%), Gaps = 55/382 (14%)

Query: 101 PSGFKFGMQVHCLVLKSNQTFDG-----LVSNVLIAMYGSCLESTDCARRIFEEIETRDL 155
           PS    G Q+H   +   + F G     +++  +++ Y SC E  D AR++F+ +  R+ 
Sbjct: 84  PSSLGLGAQLHAQAVV--RGFLGGDDSTILATAVLSFYASCRE-PDLARKVFDGMPRRNA 140

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL 215
           ++WN++I  Y+Q G       LF  M+REG    + P+ YTF +L++       SG  L 
Sbjct: 141 VTWNALIKGYAQAGRREEAILLFRDMKREG--SHVAPDRYTFPALLSGIGREGGSGRTLE 198

Query: 216 --QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM---------------- 257
               + A V KAGL  D +VG++LVS +A       A+  F+Q+                
Sbjct: 199 LGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYV 258

Query: 258 -------------------------IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA 292
                                    +   V S+ G M     GK+VH + ++S      A
Sbjct: 259 NCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAA 318

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           + N L+ MY+ CG I+D++ VF      + +S+N+MIS L Q+G  +EA+ +F  M+  G
Sbjct: 319 MFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAG 378

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GLDSDVSVSNALLSLYADAGYLSRC 411
           LM    +L++ +SS    G +  G Q+    + + G+         ++ + A +G + + 
Sbjct: 379 LMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKA 438

Query: 412 LKVFFLMP-EHDQVSWNSVIGA 432
           +K    MP E +   W  V+GA
Sbjct: 439 MKTINEMPFEAEAPLWRIVLGA 460



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 172/381 (45%), Gaps = 21/381 (5%)

Query: 275 GKEVHGYLIRSGLF---DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
           G ++H   +  G     D   +   +++ YA C   D +R VF  M  +++V+WN +I G
Sbjct: 90  GAQLHAQAVVRGFLGGDDSTILATAVLSFYASCREPDLARKVFDGMPRRNAVTWNALIKG 149

Query: 332 LDQNGCYEEAIMNFCAMRRDG--LMSSNFSLISTLSSCASLG----WIMLGQQIHGEGLK 385
             Q G  EEAI+ F  M+R+G  +    ++  + LS     G     + LG  +H   +K
Sbjct: 150 YAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLSGIGREGGSGRTLELGGALHAHVIK 209

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            GL+ D  V  +L+SLYA    L      F  +   D + W+S+I A+ + E     A+ 
Sbjct: 210 AGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEE-EEGALL 268

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            + +M      P    +  + +      + ++G QVHA  +K N   +  + NALL+ Y 
Sbjct: 269 IFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYS 328

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
            CG ++D +K+F+  ++  + +S+NSMIS    +    +A+     M   G   D  T  
Sbjct: 329 DCGCINDAQKVFSS-NDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLL 387

Query: 566 TVLSACASVATLERGME-----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
            ++S+      +  G++     V   G++   +    +    VDM ++ G I  A +  +
Sbjct: 388 NLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACV----VDMLARSGEIGKAMKTIN 443

Query: 621 LMPVR-NVYSWNSMISGYARH 640
            MP       W  ++   ++H
Sbjct: 444 EMPFEAEAPLWRIVLGACSKH 464



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 154/344 (44%), Gaps = 59/344 (17%)

Query: 192 PNEYTFGSLITAAYSSV-----LSGSYLLQQILAMVKKAGLL---SDLYVGSALVSGFAR 243
           P    F +L+ AA SS       S   L  Q+ A     G L       + +A++S +A 
Sbjct: 62  PTPRAFSALLKAASSSASPPRRPSSLGLGAQLHAQAVVRGFLGGDDSTILATAVLSFYAS 121

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRKGKEV-------- 278
                 ARK+F+ M ++N V+ N L++G                 +R+G  V        
Sbjct: 122 CREPDLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFP 181

Query: 279 ----------------------HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                                 H ++I++GL     VG  LV++YA   T++D++  F  
Sbjct: 182 ALLSGIGREGGSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQ 241

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           +   D + W++MIS        E A++ F  M    +  + F   +  S C  +G + +G
Sbjct: 242 VGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMG 301

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +Q+H   LK   + D ++ NALL++Y+D G ++   KVF      + +S+NS+I A    
Sbjct: 302 KQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISALG-Q 360

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
                EA++++  M+ AG  P+ VT +N++   SSF+   L H+
Sbjct: 361 HGYPKEALEHFRQMKFAGLMPDEVTLLNLI---SSFNHAGLVHE 401



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 129/283 (45%), Gaps = 20/283 (7%)

Query: 7   FHLQILKHGFA---YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            H Q +  GF        L   +++ Y    +   A K+FD MP RN+V+W  ++ GY  
Sbjct: 93  LHAQAVVRGFLGGDDSTILATAVLSFYASCREPDLARKVFDGMPRRNAVTWNALIKGYAQ 152

Query: 64  KGMSNEACKMFKEMVRAG--FLLNRYALGSVLRACQECGPSG--FKFGMQVHCLVLKSNQ 119
            G   EA  +F++M R G     +RY   ++L      G SG   + G  +H  V+K+  
Sbjct: 153 AGRREEAILLFRDMKREGSHVAPDRYTFPALLSGIGREGGSGRTLELGGALHAHVIKAGL 212

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D  V   L+++Y +     D A+  F+++ + D I W+S+IS Y    +      +F 
Sbjct: 213 ERDPFVGASLVSLYAARRTLED-AKVAFDQVGSSDPIVWSSMISAYVNCEEEEGALLIFF 271

Query: 180 RMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
            M  +     +KP ++ + ++ +      +L    + +Q+ A   K+    D  + +AL+
Sbjct: 272 NMLCQ----DIKPTQFVYSTVFSVCGRMGILE---MGKQVHAHSLKSNTEKDAAMFNALL 324

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY 281
           + ++  G    A+K+F      NV+S N ++    +    HGY
Sbjct: 325 TMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQ----HGY 363


>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 236/696 (33%), Positives = 371/696 (53%), Gaps = 41/696 (5%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYA--KCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           K++H +++R+  F      + L+  YA   C  +  +++VF  +   +   WNT+I G  
Sbjct: 89  KQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYA 148

Query: 334 QNGCYEEAIMNFCAMRRD-GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            +    ++ + F  M        + F+      + + L  + LG  +HG  +K  L SD+
Sbjct: 149 SSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDL 208

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            + N+L++ Y  +G      +VF  MP  D VSWN++I AFA    L  +A+  + +M  
Sbjct: 209 FILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALG-GLPDKALLLFQEMEM 267

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
               PN +T +++L+A +     + G  + + +          + NA+L  Y KCG ++D
Sbjct: 268 KDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCIND 327

Query: 513 CEKIFARMSERR-----------------DEV-------------SWNSMISGYIHNELL 542
            + +F +MSE+                  DE              +WN++IS Y  N   
Sbjct: 328 AKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKP 387

Query: 543 PKAMNLVWFM-MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             A++L   M + +  + D  T    L A A +  ++ G  +H    +  +  +  + ++
Sbjct: 388 RVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATS 447

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+DMY+KCG ++ A   F  +  ++VY W++MI   A +G G  AL LFS M      P+
Sbjct: 448 LLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPN 507

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            VTF  +L AC+HAGLV+EG + F+ M  +YG++PQ++ + C+VD+ GRAG L+K   FI
Sbjct: 508 AVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFI 567

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
            KMPI P + +W  +LGAC R      EL   A   L E+EP N   +VLL+N+YA  G 
Sbjct: 568 EKMPIPPTAAVWGALLGACSRHG--NVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGD 625

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           WE V+  RK M++++VKKE  CS + +   VH F+ GD SHP    IY KL E+++K + 
Sbjct: 626 WEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFKP 685

Query: 842 AGYVPQTKFALFDLEPESK--EDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCH 898
            GY P     L  L  E    E  ++ HSEK+A+AF +++  S  PIRI+KN+R+CGDCH
Sbjct: 686 IGYKPDMS-NLLQLSEEDNLMEQSLNVHSEKLAIAFGLISTASSQPIRIVKNIRICGDCH 744

Query: 899 SAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +  K +S++  R+I+LRD  RFHHF  GKCSC DYW
Sbjct: 745 AFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 123/535 (22%), Positives = 233/535 (43%), Gaps = 46/535 (8%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYV--RVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           K  H  +L+     D +  + L+  Y       L  A  +F+++P  N   W  ++ GY 
Sbjct: 89  KQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYA 148

Query: 63  HKGMSNEACKMFKEMVRA-GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                 ++  +F  M+ +     N++    + +A           G  +H +V+K++ + 
Sbjct: 149 SSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRL--KVLHLGSVLHGMVIKASLSS 206

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  + N LI  YGS   + D A R+F  +  +D++SWN++I+ ++  G       LF  M
Sbjct: 207 DLFILNSLINFYGSS-GAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEM 265

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           + +     +KPN  T  S+++A    +       + I + ++  G    L + +A++  +
Sbjct: 266 EMK----DVKPNVITMVSVLSACAKKI--DLEFGRWICSYIENNGFTEHLILNNAMLDMY 319

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
            + G    A+ +F +M +K++VS   +++G                             +
Sbjct: 320 VKCGCINDAKDLFNKMSEKDIVSWTTMLDG-----------------------------H 350

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR--RDGLMSSNFS 359
           AK G  D++  +F  M  K + +WN +IS  +QNG    A+  F  M+  +D       +
Sbjct: 351 AKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDA-KPDEVT 409

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           LI  L + A LG I  G  IH    K  ++ +  ++ +LL +YA  G L++ ++VF  + 
Sbjct: 410 LICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVE 469

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             D   W+++IGA A        A+  +  M  A   PN VTF NIL A +   +   G 
Sbjct: 470 RKDVYVWSAMIGALA-MYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGE 528

Query: 480 QVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           Q+  Q+   Y +  +      ++  +G+ G ++       +M        W +++
Sbjct: 529 QLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALL 583



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 127/543 (23%), Positives = 228/543 (41%), Gaps = 87/543 (16%)

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFA--RLGNFYYARKIFEQMIQKNVVSMNGLMEG- 271
           L+QI A + +     D Y  S L++ +A        YA+ +F Q+ Q N+   N L+ G 
Sbjct: 88  LKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGY 147

Query: 272 -------------------------------------RRK----GKEVHGYLIRSGLFDM 290
                                                R K    G  +HG +I++ L   
Sbjct: 148 ASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSD 207

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           + + N L+N Y   G  D +  VF  M GKD VSWN MI+     G  ++A++ F  M  
Sbjct: 208 LFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEM 267

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
             +  +  +++S LS+CA    +  G+ I       G    + ++NA+L +Y   G ++ 
Sbjct: 268 KDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCIND 327

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADS---------------------EALVSE------- 442
              +F  M E D VSW +++   A                        AL+S        
Sbjct: 328 AKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKP 387

Query: 443 --AVKYYLDMRRA-GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
             A+  + +M+ +    P+ VT I  L A++       GH +H  + K+++     +  +
Sbjct: 388 RVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATS 447

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           LL  Y KCG ++   ++F  + ER+D   W++MI           A++L   M++   + 
Sbjct: 448 LLDMYAKCGNLNKAMEVFHAV-ERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKP 506

Query: 560 DHFTFATVLSACASVATLERGMEVHA-----CGVRACLEFDVVIGSALVDMYSKCGRIDY 614
           +  TF  +L AC     +  G ++        G+   ++  V +    VD++ + G ++ 
Sbjct: 507 NAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCV----VDIFGRAGLLEK 562

Query: 615 ASRFFDLMPVRNVYS-WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
           A+ F + MP+    + W +++   +RHG+ + A  L  Q  L+    +H  FV + +  +
Sbjct: 563 AASFIEKMPIPPTAAVWGALLGACSRHGNVELA-ELAYQNLLELEPCNHGAFVLLSNIYA 621

Query: 674 HAG 676
            AG
Sbjct: 622 KAG 624



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 137/333 (41%), Gaps = 24/333 (7%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+    T+++ + ++G+   A  +FD MP + + +W  ++S Y   G    A  +F EM 
Sbjct: 339 DIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQ 398

Query: 79  RAGFLLNRYALGSVLRACQECGPS---GFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS 135
               L        V   C  C  +      FG  +H  + K +   +  ++  L+ MY  
Sbjct: 399 ----LSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAK 454

Query: 136 CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
           C  + + A  +F  +E +D+  W+++I   +  G   +   LFS M        +KPN  
Sbjct: 455 C-GNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSM----LEAYIKPNAV 509

Query: 196 TFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKI 253
           TF +++ A   + L   G  L +Q+  +    G++  +     +V  F R G    A   
Sbjct: 510 TFTNILCACNHAGLVNEGEQLFEQMEPLY---GIVPQIQHYVCVVDIFGRAGLLEKAASF 566

Query: 254 FEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTI 307
            E+M      ++ G + G   R G      L    L ++    +G    L N+YAK G  
Sbjct: 567 IEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDW 626

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
           +   ++ + M   D V      S +D NG   E
Sbjct: 627 EKVSNLRKLMRDSD-VKKEPWCSSIDVNGIVHE 658


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  411 bits (1056), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 257/769 (33%), Positives = 402/769 (52%), Gaps = 78/769 (10%)

Query: 89  LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS--NVLIAMYGSCLESTDCARRI 146
           L  VLR C E G    +    VH LVLKSN     L+   N    +Y  C E    A  +
Sbjct: 121 LIDVLRDCAEKGS--IREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSE-FRAACGV 177

Query: 147 FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS 206
           F+E+  R++ SW  +I   ++ G       LF     +GF++        F  ++ +   
Sbjct: 178 FDEMPQRNVFSWTVMIVGSTEHG-------LFF----DGFKF--------FCEMLNS--- 215

Query: 207 SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN 266
                              G+L D +  SA++                     ++ + ++
Sbjct: 216 -------------------GILPDKFAYSAII---------------------QSCIGLD 235

Query: 267 GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
            L      GK VH  ++  G    + V   L+NMYAK G+I+DS  VF  M   + VSWN
Sbjct: 236 SL----ELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWN 291

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            MISG   NG + EA   F  M+      + ++L+S   +   L  + +G+++     +L
Sbjct: 292 AMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASEL 351

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVF--FLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           G++ +V V  AL+ +Y+  G L     VF    +       WN++I  ++ S     EA+
Sbjct: 352 GIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQS-GCSQEAL 410

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV-ANETTIENALLSC 503
           + Y+ M + G + +  T+ ++  A ++    + G  VH  V+K  +     ++ NA+   
Sbjct: 411 ELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADA 470

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           Y KCG ++D  K+F RM E RD VSW ++++ Y  + L  +A+     M + G   + FT
Sbjct: 471 YSKCGFLEDVRKVFDRM-EERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFT 529

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           F++VL +CAS+  LE G +VH    +A L+ +  I SAL+DMY+KCG I  A + FD + 
Sbjct: 530 FSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKIS 589

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
             ++ SW ++ISGYA+HG  + AL LF +M+L G   + VT + VL ACSH G+V+EG  
Sbjct: 590 NPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLF 649

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
           +F+ M   YG++P++E ++C++DLLGR G LD   EFI KMP+ PN ++W+T+LG  CR 
Sbjct: 650 YFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGG-CRV 708

Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
           +    ELG  AA  +  + P+ +  YVLL+N Y   G +ED    R  MK+  VKKE G 
Sbjct: 709 H-GNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGY 767

Query: 804 SWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFAL 852
           SW+++K  VH F +GD+ HP+K  IY KL+EL +K++  GYVP  ++ L
Sbjct: 768 SWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAMGYVPDLRYVL 816



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 163/581 (28%), Positives = 279/581 (48%), Gaps = 57/581 (9%)

Query: 2   KDAKLFHLQILKHGFAYD--VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           ++AK  H  +LK  F     + L N   +VY +  +  +A  +FDEMP RN  SW  ++ 
Sbjct: 135 REAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIV 194

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           G T  G+  +  K F EM+ +G L +++A  +++++C   G    + G  VH  ++    
Sbjct: 195 GSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSC--IGLDSLELGKMVHAQIVMRGF 252

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
                VS  L+ MY   L S + +  +F  +   + +SWN++IS  +  G  +  F LF 
Sbjct: 253 ATHIFVSTSLLNMYAK-LGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFV 311

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           RM+      +  PN YT  S+  A     L    + +++     + G+  ++ VG+AL+ 
Sbjct: 312 RMKNG----ACTPNMYTLVSVSKAV--GKLVDVNMGKEVQNCASELGIEGNVLVGTALID 365

Query: 240 GFARLGNFYYARKIFE---------------------------------QMIQKNVVS-- 264
            +++ G+ + AR +F+                                 QM Q  + S  
Sbjct: 366 MYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDL 425

Query: 265 ------MNGLMEGR--RKGKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFR 315
                  N +   +  + G+ VHG +++ GL  M V+V N + + Y+KCG ++D R VF 
Sbjct: 426 YTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFD 485

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M  +D VSW T+++   Q+   EEA+  FC MR +G   + F+  S L SCASL ++  
Sbjct: 486 RMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEY 545

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G+Q+HG   K GLD++  + +AL+ +YA  G ++   KVF  +   D VSW ++I  +A 
Sbjct: 546 GRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQ 605

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANET 494
              LV +A++ +  M  +G   N VT + +L A S   M + G     Q+   Y V  E 
Sbjct: 606 -HGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEM 664

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
                ++   G+ G +DD  +   +M    +E+ W +++ G
Sbjct: 665 EHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGG 705



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 18/281 (6%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLI-NVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
            ++ H  +LK G    V   N  I + Y + G L    K+FD M +R+ VSW  +V+ Y+
Sbjct: 444 GRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYS 503

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
              +  EA   F  M   GF  N++   SVL +C        ++G QVH L+ K+    +
Sbjct: 504 QSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASL--CFLEYGRQVHGLLCKAGLDTE 561

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             + + LI MY  C   T+ A ++F++I   D++SW +IIS Y+Q G      +LF RM+
Sbjct: 562 KCIESALIDMYAKCGSITE-AGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRME 620

Query: 183 REGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
             G    +K N  T   ++ A      V  G +  QQ   M    G++ ++   + ++  
Sbjct: 621 LSG----IKANAVTLLCVLFACSHGGMVEEGLFYFQQ---MEDGYGVVPEMEHYACIIDL 673

Query: 241 FARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVHG 280
             R+G    A +   +M ++ N +    L+ G R    VHG
Sbjct: 674 LGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCR----VHG 710


>gi|125544635|gb|EAY90774.1| hypothetical protein OsI_12377 [Oryza sativa Indica Group]
          Length = 653

 Score =  411 bits (1056), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 231/593 (38%), Positives = 336/593 (56%), Gaps = 17/593 (2%)

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK---LGLDSDVSVSNALLSLYADAGYL 408
            L+ +  S  S     +SLG   LG Q+H + +    LG D    ++ A+LS YA     
Sbjct: 68  ALLKAASSSASPPRRPSSLG---LGAQLHAQAVVRGFLGGDDSTILATAVLSFYASCREP 124

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG--WSPNGVTFINIL 466
               KVF  MP  + V+WN++I  +A +     EA+  + DM+R G   +P+  TF  +L
Sbjct: 125 DLARKVFDGMPRRNAVTWNALIKGYAQA-GRREEAILLFRDMKREGSHVAPDRYTFPALL 183

Query: 467 AA----ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
           +       S    +LG  +HA VIK  +  +  +  +L+S Y     ++D +  F ++  
Sbjct: 184 SGIGREGGSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGS 243

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
             D + W+SMIS Y++ E    A+ + + M+ +  +   F ++TV S C  +  LE G +
Sbjct: 244 S-DPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQ 302

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
           VHA  +++  E D  + +AL+ MYS CG I+ A + F      NV S+NSMIS   +HG+
Sbjct: 303 VHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGY 362

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
             +AL  F QMK  G +PD VT + ++S+ +HAGLV EG + F SM  + G+ P  + ++
Sbjct: 363 PKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYA 422

Query: 703 CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
           C+VD+L R+GE+ K  + IN+MP    + +WR VLGAC +   R  E G++ A MLFEME
Sbjct: 423 CVVDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKH--RDIETGKRIAEMLFEME 480

Query: 763 PQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESH 822
           P  A NY+LL N+YA  G+W +  K R  M E  V K+   SW+ M    + F   D SH
Sbjct: 481 PYEATNYILLGNIYARLGRWTEAEKVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDRSH 540

Query: 823 PEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNS 881
           P    IY  L  L   ++ AGYVP   FA  +++ + KE+ + YH EK+A AF  L   S
Sbjct: 541 PISREIYRNLDRLISTIKVAGYVPDISFAAHNIQRDRKEESLYYHCEKLAFAFGDLAAPS 600

Query: 882 KLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
              +RIMKNLRVCGDCH A+K+ S + GREI+LRD+ RFHHFN G CSCGDYW
Sbjct: 601 GGTLRIMKNLRVCGDCHCAYKYFSLVTGREIILRDNQRFHHFNSGFCSCGDYW 653



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 176/382 (46%), Gaps = 55/382 (14%)

Query: 101 PSGFKFGMQVHCLVLKSNQTFDG-----LVSNVLIAMYGSCLESTDCARRIFEEIETRDL 155
           PS    G Q+H   +   + F G     +++  +++ Y SC E  D AR++F+ +  R+ 
Sbjct: 83  PSSLGLGAQLHAQAVV--RGFLGGDDSTILATAVLSFYASCRE-PDLARKVFDGMPRRNA 139

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL 215
           ++WN++I  Y+Q G       LF  M+REG    + P+ YTF +L++       SG  L 
Sbjct: 140 VTWNALIKGYAQAGRREEAILLFRDMKREGSH--VAPDRYTFPALLSGIGREGGSGRTLE 197

Query: 216 --QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM---------------- 257
               + A V KAGL  D +VG++LVS +A       A+  F+Q+                
Sbjct: 198 LGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYV 257

Query: 258 -------------------------IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA 292
                                    +   V S+ G M     GK+VH + ++S      A
Sbjct: 258 NCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAA 317

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           + N L+ MY+ CG I+D++ VF      + +S+N+MIS L Q+G  +EA+ +F  M+  G
Sbjct: 318 MFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAG 377

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GLDSDVSVSNALLSLYADAGYLSRC 411
           LM    +L++ +SS    G +  G Q+    + + G+         ++ + A +G + + 
Sbjct: 378 LMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKA 437

Query: 412 LKVFFLMP-EHDQVSWNSVIGA 432
           +K    MP E +   W  V+GA
Sbjct: 438 MKTINEMPFEAEAPLWRIVLGA 459



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 172/381 (45%), Gaps = 21/381 (5%)

Query: 275 GKEVHGYLIRSGLF---DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
           G ++H   +  G     D   +   +++ YA C   D +R VF  M  +++V+WN +I G
Sbjct: 89  GAQLHAQAVVRGFLGGDDSTILATAVLSFYASCREPDLARKVFDGMPRRNAVTWNALIKG 148

Query: 332 LDQNGCYEEAIMNFCAMRRDG--LMSSNFSLISTLSSCASLG----WIMLGQQIHGEGLK 385
             Q G  EEAI+ F  M+R+G  +    ++  + LS     G     + LG  +H   +K
Sbjct: 149 YAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLSGIGREGGSGRTLELGGALHAHVIK 208

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            GL+ D  V  +L+SLYA    L      F  +   D + W+S+I A+ + E     A+ 
Sbjct: 209 AGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEE-EEGALL 267

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            + +M      P    +  + +      + ++G QVHA  +K N   +  + NALL+ Y 
Sbjct: 268 IFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYS 327

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
            CG ++D +K+F+  ++  + +S+NSMIS    +    +A+     M   G   D  T  
Sbjct: 328 DCGCINDAQKVFSS-NDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLL 386

Query: 566 TVLSACASVATLERGME-----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
            ++S+      +  G++     V   G++   +    +    VDM ++ G I  A +  +
Sbjct: 387 NLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACV----VDMLARSGEIGKAMKTIN 442

Query: 621 LMPVR-NVYSWNSMISGYARH 640
            MP       W  ++   ++H
Sbjct: 443 EMPFEAEAPLWRIVLGACSKH 463



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 154/344 (44%), Gaps = 59/344 (17%)

Query: 192 PNEYTFGSLITAAYSSV-----LSGSYLLQQILAMVKKAGLL---SDLYVGSALVSGFAR 243
           P    F +L+ AA SS       S   L  Q+ A     G L       + +A++S +A 
Sbjct: 61  PTPRAFSALLKAASSSASPPRRPSSLGLGAQLHAQAVVRGFLGGDDSTILATAVLSFYAS 120

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG-----------------RRKGKEV-------- 278
                 ARK+F+ M ++N V+ N L++G                 +R+G  V        
Sbjct: 121 CREPDLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFP 180

Query: 279 ----------------------HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                                 H ++I++GL     VG  LV++YA   T++D++  F  
Sbjct: 181 ALLSGIGREGGSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQ 240

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           +   D + W++MIS        E A++ F  M    +  + F   +  S C  +G + +G
Sbjct: 241 VGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMG 300

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +Q+H   LK   + D ++ NALL++Y+D G ++   KVF      + +S+NS+I A    
Sbjct: 301 KQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISALG-Q 359

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
                EA++++  M+ AG  P+ VT +N++   SSF+   L H+
Sbjct: 360 HGYPKEALEHFRQMKFAGLMPDEVTLLNLI---SSFNHAGLVHE 400



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 129/283 (45%), Gaps = 20/283 (7%)

Query: 7   FHLQILKHGFA---YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            H Q +  GF        L   +++ Y    +   A K+FD MP RN+V+W  ++ GY  
Sbjct: 92  LHAQAVVRGFLGGDDSTILATAVLSFYASCREPDLARKVFDGMPRRNAVTWNALIKGYAQ 151

Query: 64  KGMSNEACKMFKEMVRAG--FLLNRYALGSVLRACQECGPSG--FKFGMQVHCLVLKSNQ 119
            G   EA  +F++M R G     +RY   ++L      G SG   + G  +H  V+K+  
Sbjct: 152 AGRREEAILLFRDMKREGSHVAPDRYTFPALLSGIGREGGSGRTLELGGALHAHVIKAGL 211

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D  V   L+++Y +     D A+  F+++ + D I W+S+IS Y    +      +F 
Sbjct: 212 ERDPFVGASLVSLYAARRTLED-AKVAFDQVGSSDPIVWSSMISAYVNCEEEEGALLIFF 270

Query: 180 RMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
            M  +     +KP ++ + ++ +      +L    + +Q+ A   K+    D  + +AL+
Sbjct: 271 NMLCQ----DIKPTQFVYSTVFSVCGRMGILE---MGKQVHAHSLKSNTEKDAAMFNALL 323

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY 281
           + ++  G    A+K+F      NV+S N ++    +    HGY
Sbjct: 324 TMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQ----HGY 362


>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
 gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
          Length = 552

 Score =  411 bits (1056), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 220/548 (40%), Positives = 329/548 (60%), Gaps = 20/548 (3%)

Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           + D+   N +L+ Y     L     +F  MPE D VSWN+++  +A +   V EA + + 
Sbjct: 23  ERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQN-GFVDEAREIFY 81

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            M       NG+++  +LAA       +   ++    + + + +     N L+      G
Sbjct: 82  KMPL----KNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSW----NCLMG-----G 128

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
            +     +F  M +R D +SW++MI+GY  N    +A++    M +  +RL+  +F   L
Sbjct: 129 FVRKRRNLFDNMPQR-DSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCAL 187

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
           S C+++A LE G ++H   V+A  +    +G+AL+ MY KCG ID A   F  +  ++V 
Sbjct: 188 STCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVV 247

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           SWN+MI GYARHG G++ALT+F  MK  G  PD  T V VL+ACSHAGLVD+G ++F SM
Sbjct: 248 SWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSM 307

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRK 747
           ++ YG+  +L  ++CMVDLLGRAG+L++ +  +  MP  P++  W  +LGA     N   
Sbjct: 308 NRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGN--- 364

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
           TELG KAA ++FEMEP N+  Y+LL+ +YA+ G+W D  K R  M+   VKK  G SW+ 
Sbjct: 365 TELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLE 424

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
           +++ +H F  GD SHP  D IY  L+E++ K++  GY+  T     D+E E K  ++ YH
Sbjct: 425 VQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVHMLKYH 484

Query: 868 SEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SEK+AVA+ +L   +  PIR++KNLRVC DCH+A K+ISKIVGR I+LRD++RFH+F  G
Sbjct: 485 SEKLAVAYGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFHYFEGG 544

Query: 927 KCSCGDYW 934
            CSC D+W
Sbjct: 545 SCSCRDFW 552



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 189/418 (45%), Gaps = 57/418 (13%)

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
           D AR +F+++  RDL SWN +++ Y +  D  +   LF RM                   
Sbjct: 12  DLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPER---------------- 55

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
                                        D+   +A++SG+A+ G    AR+IF +M  K
Sbjct: 56  -----------------------------DIVSWNAMLSGYAQNGFVDEAREIFYKMPLK 86

Query: 261 NVVSMNGLMEGRRKGKEVHG--YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
           N +S NGL+    +   +     L  S +   +   N L+      G +   R++F  M 
Sbjct: 87  NGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMG-----GFVRKRRNLFDNMP 141

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            +DS+SW+ MI+G  QNGC EEA+  F  M+RD    +  S    LS+C+++  + LG+Q
Sbjct: 142 QRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQ 201

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           +H   +K G  +   V NALL++Y   G +      F  + E D VSWN++I  +A    
Sbjct: 202 LHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYA-RHG 260

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIE 497
              EA+  +  M+  G  P+  T +++LAA S   +   G +    + + Y +  +    
Sbjct: 261 FGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHY 320

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI-SGYIH--NELLPKAMNLVWFM 552
             ++   G+ G++++ + +   M    D  +W +++ +  IH   EL  KA  +++ M
Sbjct: 321 TCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEM 378



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 113/473 (23%), Positives = 209/473 (44%), Gaps = 70/473 (14%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+F  N ++  YVR  DL +A  LF+ MP+R+ VSW  ++SGY   G  +EA ++F +M 
Sbjct: 25  DLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKMP 84

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
               L N  +   +L A  + G             +  + + F+  +   L++   +CL 
Sbjct: 85  ----LKNGISWNGLLAAYVQNGR------------IEDAKRLFESKMDWTLVSW--NCLM 126

Query: 139 STDCARR--IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
                +R  +F+ +  RD ISW+++I+ YSQ G +      F  MQR+  R     N  +
Sbjct: 127 GGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERL----NRSS 182

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           F   ++    S ++   L +Q+   + KAG  +  YVG+AL++ + + G+   AR  F++
Sbjct: 183 FTCALSTC--SNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQE 240

Query: 257 MIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
           +++K+VVS N ++ G                             YA+ G  +++ +VF  
Sbjct: 241 ILEKDVVSWNTMIHG-----------------------------YARHGFGEEALTVFEL 271

Query: 317 M----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           M    I  D  +  ++++     G  ++    F +M RD  +++   L+        LG 
Sbjct: 272 MKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITA--KLVHYTCMVDLLG- 328

Query: 373 IMLGQQIHGEGL--KLGLDSDVSVSNALLS---LYADAGYLSRCLKVFFLMPEHDQVSWN 427
              GQ    + L   +  + D +   ALL    ++ +     +  ++ F M  H+   + 
Sbjct: 329 -RAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYI 387

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSP-NGVTFINILAAASSFSMGKLGH 479
            +   +A S    S+A K  L+MR  G     G +++ +     +F +G   H
Sbjct: 388 LLSKLYAAS-GRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTFKVGDTSH 439



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 48/97 (49%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +  H +++K G+    ++ N L+ +Y + G +  A   F E+ +++ VSW  ++ GY  
Sbjct: 199 GRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYAR 258

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G   EA  +F+ M   G   +   + SVL AC   G
Sbjct: 259 HGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAG 295



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 22/180 (12%)

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           ++  Y +  + D A   FD MP R+++SWN M++GY R+     A  LF +M    P  D
Sbjct: 1   MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERM----PERD 56

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE-F 720
            V++  +LS  +  G VDE  + F  M    G+      ++ ++    + G ++  +  F
Sbjct: 57  IVSWNAMLSGYAQNGFVDEAREIFYKMPLKNGI-----SWNGLLAAYVQNGRIEDAKRLF 111

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
            +KM  T  S  W  ++G             RK  N+   M  ++++++  +   Y+  G
Sbjct: 112 ESKMDWTLVS--WNCLMGG----------FVRKRRNLFDNMPQRDSISWSAMIAGYSQNG 159


>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
 gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 583

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/562 (38%), Positives = 335/562 (59%), Gaps = 8/562 (1%)

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           QQ+H   +  G     S+   L++L   A  ++    +F  +P  D   +NSVI + +  
Sbjct: 26  QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
             L    V YY  M  +  SP+  TF +++ + +  S  ++G  VH   +      +T +
Sbjct: 86  R-LPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYV 144

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
           + AL++ Y KCG+M+   ++F RM E+   V+WNS++SG+  N L  +A+ + + M + G
Sbjct: 145 QAALVTFYSKCGDMEGARQVFDRMPEK-SIVAWNSLVSGFEQNGLADEAIQVFYQMRESG 203

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
              D  TF ++LSACA    +  G  VH   +   L+ +V +G+AL+++YS+CG +  A 
Sbjct: 204 FEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAR 263

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD-GPLPDHVTFVGVLSACSHA 675
             FD M   NV +W +MIS Y  HG+G +A+ LF++M+ D GP+P++VTFV VLSAC+HA
Sbjct: 264 EVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHA 323

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL---I 732
           GLV+EG   +K M++ Y LIP +E   CMVD+LGRAG LD+  +FI+++  T  +    +
Sbjct: 324 GLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPAL 383

Query: 733 WRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAM 792
           W  +LGAC     R  +LG + A  L  +EP N  ++V+L+N+YA  GK ++V+  R  M
Sbjct: 384 WTAMLGAC--KMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGM 441

Query: 793 KEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFAL 852
               ++K+ G S + +++  ++F  GDESH E   IY  L+ L  + ++ GY P ++  +
Sbjct: 442 MRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVM 501

Query: 853 FDLEPESKEDLVSYHSEKIAVAFVLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREI 912
             +E E KE  + YHSEK+AVAF L +   + I I+KNLR+C DCHSAFK+IS +  R+I
Sbjct: 502 HQVEEEEKEFALRYHSEKLAVAFGLLKTVDVAITIVKNLRICEDCHSAFKYISIVSNRQI 561

Query: 913 VLRDSNRFHHFNDGKCSCGDYW 934
            +RD  RFHHF +G CSC DYW
Sbjct: 562 TVRDKLRFHHFQNGSCSCLDYW 583



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 191/418 (45%), Gaps = 17/418 (4%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           ++ ++VH +LI +G     ++   L+ +      I  +  +F  +   D   +N++I   
Sbjct: 23  KQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKST 82

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            +       +  +  M    +  SN++  S + SCA L  + +G+ +H   +  G   D 
Sbjct: 83  SKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDT 142

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V  AL++ Y+  G +    +VF  MPE   V+WNS++  F +   L  EA++ +  MR 
Sbjct: 143 YVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGF-EQNGLADEAIQVFYQMRE 201

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           +G+ P+  TF+++L+A +      LG  VH  +I   +     +  AL++ Y +CG++  
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGK 261

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR-GQRLDHFTFATVLSAC 571
             ++F +M E  +  +W +MIS Y  +    +A+ L   M    G   ++ TF  VLSAC
Sbjct: 262 AREVFDKMKE-TNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVRNV 627
           A    +E G  V+    R    + ++ G      +VDM  + G +D A +F   +     
Sbjct: 321 AHAGLVEEGRSVYK---RMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGK 377

Query: 628 YS----WNSMISGYARHGHGDKALTLFSQM-KLDGPLPDHVTFVGVLSACSHAGLVDE 680
            +    W +M+     H + D  + +  ++  L+   P H   +  + A S  G  DE
Sbjct: 378 ATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALS--GKTDE 433



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 156/321 (48%), Gaps = 16/321 (4%)

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN----------GLMEGRRKGKE 277
           L D ++ ++++   ++L    +    + +M+  NV   N            +   R GK 
Sbjct: 69  LPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKG 128

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VH + + SG      V   LV  Y+KCG ++ +R VF  M  K  V+WN+++SG +QNG 
Sbjct: 129 VHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGL 188

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
            +EAI  F  MR  G    + + +S LS+CA  G + LG  +H   +  GLD +V +  A
Sbjct: 189 ADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTA 248

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR-RAGWS 456
           L++LY+  G + +  +VF  M E +  +W ++I A+  +     +AV+ +  M    G  
Sbjct: 249 LINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYG-THGYGQQAVELFNKMEDDCGPI 307

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEK 515
           PN VTF+ +L+A +   + + G  V+ ++ K Y +         ++   G+ G +D+  K
Sbjct: 308 PNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYK 367

Query: 516 IFARMSERRDEVS---WNSMI 533
              ++       +   W +M+
Sbjct: 368 FIHQLDATGKATAPALWTAML 388



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 103/199 (51%), Gaps = 6/199 (3%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   +  GF  D ++   L+  Y + GD+  A ++FD MP+++ V+W  +VSG+   
Sbjct: 127 KGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQN 186

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G+++EA ++F +M  +GF  +     S+L AC + G      G  VH  ++      +  
Sbjct: 187 GLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTG--AVSLGSWVHQYIISEGLDLNVK 244

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           +   LI +Y  C +    AR +F++++  ++ +W ++IS Y   G      +LF++M+ +
Sbjct: 245 LGTALINLYSRCGDVGK-AREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDD 303

Query: 185 GFRYSLKPNEYTFGSLITA 203
                  PN  TF ++++A
Sbjct: 304 C---GPIPNNVTFVAVLSA 319



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 146/334 (43%), Gaps = 53/334 (15%)

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           +F  +   D   +NS+I   S+    +     + RM       ++ P+ YTF S+I +  
Sbjct: 63  LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRM----LSSNVSPSNYTFTSVIKSC- 117

Query: 206 SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
            + LS   + + +      +G   D YV +ALV+ +++ G+   AR++F++M +K++V+ 
Sbjct: 118 -ADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAW 176

Query: 266 NGLMEG-----------------RRKGKE------------------------VHGYLIR 284
           N L+ G                 R  G E                        VH Y+I 
Sbjct: 177 NSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIIS 236

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
            GL   V +G  L+N+Y++CG +  +R VF  M   +  +W  MIS    +G  ++A+  
Sbjct: 237 EGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVEL 296

Query: 345 FCAMRRD-GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSLY 402
           F  M  D G + +N + ++ LS+CA  G +  G+ ++    K   L   V     ++ + 
Sbjct: 297 FNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDML 356

Query: 403 ADAGYLSRCLKVFFLMPEHDQVS----WNSVIGA 432
             AG+L    K    +    + +    W +++GA
Sbjct: 357 GRAGFLDEAYKFIHQLDATGKATAPALWTAMLGA 390


>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
 gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
 gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 722

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 231/652 (35%), Positives = 356/652 (54%), Gaps = 42/652 (6%)

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           +S+ +N  +  L ++      I+ +  +R  G     FS +  L + + +  +  G ++H
Sbjct: 75  ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 134

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
           G   K+    D  V    + +YA  G ++    VF  M   D V+WN++I  +     LV
Sbjct: 135 GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRF-GLV 193

Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT----- 495
            EA K + +M+ +   P+ +   NI++A       +    ++  +I+ +V  +T      
Sbjct: 194 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTAL 253

Query: 496 --------------------------IENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
                                     +  A++S Y KCG +DD + IF + +E++D V W
Sbjct: 254 VTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQ-TEKKDLVCW 312

Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
            +MIS Y+ ++   +A+ +   M   G + D  +  +V+SACA++  L++   VH+C   
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372

Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
             LE ++ I +AL++MY+KCG +D     F+ MP RNV SW+SMI+  + HG    AL+L
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSL 432

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           F++MK +   P+ VTFVGVL  CSH+GLV+EG K F SM+  Y + P+LE + CMVDL G
Sbjct: 433 FARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFG 492

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
           RA  L +  E I  MP+  N +IW +++ A CR +  + ELG+ AA  + E+EP +    
Sbjct: 493 RANLLREALEVIESMPVASNVVIWGSLMSA-CRIH-GELELGKFAAKRILELEPDHDGAL 550

Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIY 829
           VL++N+YA   +WEDV   R+ M+E  V KE G S +      H F+ GD+ H + + IY
Sbjct: 551 VLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIY 610

Query: 830 EKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKLP----- 884
            KL E+  K++ AGYVP     L D+E E K+DLV +HSEK+A+ F L    K       
Sbjct: 611 AKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSC 670

Query: 885 --IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             IRI+KNLRVC DCH  FK +SK+  REI++RD  RFH + +G CSC DYW
Sbjct: 671 GVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 204/441 (46%), Gaps = 47/441 (10%)

Query: 258 IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
           I K V  ++ L EG     E+HG   +        V  G ++MYA CG I+ +R+VF  M
Sbjct: 117 ILKAVSKVSALFEG----MELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEM 172

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             +D V+WNTMI    + G  +EA   F  M+   +M     L + +S+C   G +   +
Sbjct: 173 SHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNR 232

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYL-------------------------SRCL 412
            I+   ++  +  D  +  AL+++YA AG +                         S+C 
Sbjct: 233 AIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCG 292

Query: 413 K------VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
           +      +F    + D V W ++I A+ +S+    EA++ + +M  +G  P+ V+  +++
Sbjct: 293 RLDDAQVIFDQTEKKDLVCWTTMISAYVESD-YPQEALRVFEEMCCSGIKPDVVSMFSVI 351

Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           +A ++  +      VH+ +    + +E +I NAL++ Y KCG +D    +F +M  RR+ 
Sbjct: 352 SACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNV 410

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           VSW+SMI+    +     A++L   M Q     +  TF  VL  C+    +E G ++ A 
Sbjct: 411 VSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFAS 470

Query: 587 GVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSMISGYARHG 641
                 E+++         +VD++ +   +  A    + MPV  NV  W S++S  A   
Sbjct: 471 MTD---EYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMS--ACRI 525

Query: 642 HGDKALTLFSQMKLDGPLPDH 662
           HG+  L  F+  ++    PDH
Sbjct: 526 HGELELGKFAAKRILELEPDH 546



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 178/413 (43%), Gaps = 39/413 (9%)

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           +++  LS C SL  I   +Q+H   L+  ++  ++     LS+ + +  LS  L VF  +
Sbjct: 14  TILEKLSFCKSLNHI---KQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSI 70

Query: 419 P-EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
           P   + + +N  +   + S    +  + +Y  +R  G   +  +F+ IL A S  S    
Sbjct: 71  PSPPESIVFNPFLRDLSRSSEPRA-TILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFE 129

Query: 478 GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI 537
           G ++H    K     +  +E   +  Y  CG ++    +F  MS  RD V+WN+MI  Y 
Sbjct: 130 GMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMS-HRDVVTWNTMIERYC 188

Query: 538 HNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
              L+ +A  L   M       D      ++SAC     +     ++   +   +  D  
Sbjct: 189 RFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTH 248

Query: 598 IGSALVDM-------------------------------YSKCGRIDYASRFFDLMPVRN 626
           + +ALV M                               YSKCGR+D A   FD    ++
Sbjct: 249 LLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKD 308

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
           +  W +MIS Y    +  +AL +F +M   G  PD V+   V+SAC++ G++D+  K   
Sbjct: 309 LVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVH 367

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           S   V GL  +L   + ++++  + G LD   +   KMP   N + W +++ A
Sbjct: 368 SCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINA 419



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/423 (21%), Positives = 187/423 (44%), Gaps = 73/423 (17%)

Query: 14  HGFAY------DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           HG A+      D F+    +++Y   G +  A  +FDEM  R+ V+W  ++  Y   G+ 
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           +EA K+F+EM  +  + +   L +++ AC   G    ++   ++  +++++   D  +  
Sbjct: 194 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTG--NMRYNRAIYEFLIENDVRMDTHLLT 251

Query: 128 VLIAMY--GSCLE----------------------------STDCARRIFEEIETRDLIS 157
            L+ MY    C++                              D A+ IF++ E +DL+ 
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 311

Query: 158 WNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQ 216
           W ++IS Y +        ++F  M   G    +KP+  +  S+I+A A   +L  +   +
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSG----IKPDVVSMFSVISACANLGILDKA---K 364

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGK 276
            + + +   GL S+L + +AL++ +A+ G     R +FE+M ++NVVS + ++       
Sbjct: 365 WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHG 424

Query: 277 EVHGYLIRSGLFDMVAVGN---------GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
           E    L    LF  +   N         G++   +  G +++ + +F  M  + +++   
Sbjct: 425 EASDAL---SLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNIT--- 478

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL---GWIMLGQQIHGEGL 384
               L+  GC  +         R  L+     +I ++   +++   G +M   +IHGE L
Sbjct: 479 --PKLEHYGCMVDLF------GRANLLREALEVIESMPVASNVVIWGSLMSACRIHGE-L 529

Query: 385 KLG 387
           +LG
Sbjct: 530 ELG 532



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H  I  +G   ++ + N LIN+Y + G L +   +F++MP RN VSW+ +++  + 
Sbjct: 363 AKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSM 422

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G +++A  +F  M +     N      VL  C   G
Sbjct: 423 HGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSG 459


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 253/835 (30%), Positives = 430/835 (51%), Gaps = 71/835 (8%)

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS--SVLS 210
           R   SWN  I+ Y++ G      ++F  M  EG    + P+  +  +++ A  S   +  
Sbjct: 4   RSPFSWNLAIAEYARNGHHARALEIFRAMALEG----VAPDRVSCIAILDAFASLGDLSQ 59

Query: 211 GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM- 269
           G +  + +    + +GL SD+ V +A+++ + R G+  +AR+ F+ M+ +NVVS + ++ 
Sbjct: 60  GEFFHRTV---CEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIA 116

Query: 270 --------------------EGRRK--------------------GKEVHGYLIRSGLF- 288
                               EG +                     GK +H  ++  GL  
Sbjct: 117 AYAQRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLG 176

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
           D V +GN +VNMY KCG +D +R VF  M  K++V+WNTMI+   ++  Y+EA      M
Sbjct: 177 DDVILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEM 236

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
             DGL  +  +L+S + +CA +  I+ G+ +H      GL+SD +V+NAL++LY   G L
Sbjct: 237 DLDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKL 296

Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
                    +   D++SW +++ A+A        A+     M   G   +  TF+N+L +
Sbjct: 297 RAARHALEGIETRDKISWTTLLAAYA-RHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLES 355

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
             + +   LG ++H ++ +  +  +  ++ AL+  YGKCG  D   + F RMS+ RD   
Sbjct: 356 CVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTV 415

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           WN++++ Y+  +   + + +   M  +G   D  TF ++L ACAS+A L  G   H+  +
Sbjct: 416 WNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRML 475

Query: 589 ------RACLEFDVVIGSALVDMYSKCGRI-DYASRFFDLMPVR--NVYSWNSMISGYAR 639
                 R  +    ++ +++++MY+KCG + D  + F      R  +V +W++M++ Y++
Sbjct: 476 ERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQ 535

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
            G  ++AL  F  M+ +G  PD V+FV  ++ CSH+GLV E    F S+   +G+ P   
Sbjct: 536 FGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEA 595

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT--ELGRKAANM 757
            F+C+VDLL RAG + + E  + + P+  +   W T+L AC      +T  +L R     
Sbjct: 596 HFACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSAC------RTYGDLERARRVA 649

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
                 ++   Y LLA+++    KW+DV  AR+++ E     + GCSW+ + + V+ F A
Sbjct: 650 ARLASLRSGSAYSLLASVFCLSRKWDDVRNARQSLVERGFITQPGCSWIEINNRVYEFFA 709

Query: 818 GDES-HPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFV 876
           GD+   P ++ I+ +L+ L  ++R AGY       + D   + K+ L+SYHSEK+AV F 
Sbjct: 710 GDDRLLPREEEIFAELERLCVEIRKAGYERDPIKKVHDHGEQEKKFLLSYHSEKVAVVFG 769

Query: 877 LTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           L    +  P+RI+KN+ VC DCH   K IS++  R I LRD   FH F+ G CSC
Sbjct: 770 LISTPEGTPLRIVKNIGVCQDCHEVIKCISEVADRVITLRDDRSFHQFSHGSCSC 824



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 169/657 (25%), Positives = 304/657 (46%), Gaps = 78/657 (11%)

Query: 46  MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGP-SGF 104
           M DR+  SW   ++ Y   G    A ++F+ M   G   +R +  ++L A    G  S  
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 105 KFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISV 164
           +F  +  C    S    D +V+  ++ MY  C  S   ARR F+ +  R+++SW+++I+ 
Sbjct: 61  EFFHRTVCEA--SGLGSDVVVATAVLTMYNRC-GSVSHARRAFDAMVVRNVVSWSAMIAA 117

Query: 165 YSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMV 222
           Y+QRG      +LF RM  EG    +K N  TF S++ A  S  ++  G  + ++I+A  
Sbjct: 118 YAQRGHPGDALELFVRMDHEG----VKANAITFVSVLDACASMRAIALGKSIHERIVA-- 171

Query: 223 KKAGLL-SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL------------- 268
              GLL  D+ +G+ +V+ + + G    AR++FE+M  KN V+ N +             
Sbjct: 172 --DGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEA 229

Query: 269 --------MEGRR--------------------KGKEVHGYLIRSGLFDMVAVGNGLVNM 300
                   ++G R                    +G+ VH  +   GL     V N LVN+
Sbjct: 230 FALLGEMDLDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNL 289

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           Y KCG +  +R     +  +D +SW T+++   ++G  + AI     M  +G+   +F+ 
Sbjct: 290 YGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTF 349

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           ++ L SC ++  + LG++IH    + G++ D  +  AL+ +Y   G      + F  M +
Sbjct: 350 VNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSD 409

Query: 421 -HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             D   WN+++ A+   +    E +  +  M   G +P+ VTF++IL A +S +   LG 
Sbjct: 410 VRDVTVWNALLAAYVLRDQ-GKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGR 468

Query: 480 QVHAQVI------KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR--DEVSWNS 531
             H++++      +  VA+   +  ++++ Y KCG + D +  FA+    R  D V+W++
Sbjct: 469 LTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSA 528

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC 591
           M++ Y    L  +A+   + M Q G + D  +F + ++ C+       G+   A      
Sbjct: 529 MVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCS-----HSGLVREAVAFFTS 583

Query: 592 LEFDVVIG------SALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYARHG 641
           L  D  I       + LVD+ S+ G I  A       P+   +S W +++S    +G
Sbjct: 584 LRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYG 640



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/465 (29%), Positives = 239/465 (51%), Gaps = 8/465 (1%)

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M  +   SWN  I+   +NG +  A+  F AM  +G+     S I+ L + ASLG +  G
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 377 QQIHGEGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           +  H    +  GL SDV V+ A+L++Y   G +S   + F  M   + VSW+++I A+A 
Sbjct: 61  EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYA- 119

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN-VANET 494
                 +A++ ++ M   G   N +TF+++L A +S     LG  +H +++    + ++ 
Sbjct: 120 QRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDV 179

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
            + N +++ YGKCGE+D   ++F RM E ++ V+WN+MI+    ++   +A  L+  M  
Sbjct: 180 ILGNTIVNMYGKCGEVDLAREVFERM-EAKNAVTWNTMIAACSRHDRYKEAFALLGEMDL 238

Query: 555 RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
            G R +  T  +V+ ACA + ++ RG  VH       LE D  + +ALV++Y KCG++  
Sbjct: 239 DGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRA 298

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
           A    + +  R+  SW ++++ YARHGHG +A+ +  +M  +G   D  TFV +L +C  
Sbjct: 299 ARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVA 358

Query: 675 AGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
              +  G + H +       L P L+  + +VD+ G+ G  D      ++M    +  +W
Sbjct: 359 IAALALGEEIHDRLAESGIELDPVLQ--TALVDMYGKCGNPDAARRAFDRMSDVRDVTVW 416

Query: 734 RTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYAS 778
             +L A    +  K  LG  A   L  + P +AV ++ + +  AS
Sbjct: 417 NALLAAYVLRDQGKETLGIFARMSLQGVAP-DAVTFLSILDACAS 460



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 234/520 (45%), Gaps = 65/520 (12%)

Query: 5   KLFHLQILK-HGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           + FH  + +  G   DV +   ++ +Y R G ++ A + FD M  RN VSW+ +++ Y  
Sbjct: 61  EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQ 120

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
           +G   +A ++F  M   G   N     SVL AC          G  +H  ++      D 
Sbjct: 121 RGHPGDALELFVRMDHEGVKANAITFVSVLDACASM--RAIALGKSIHERIVADGLLGDD 178

Query: 124 LV-SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
           ++  N ++ MYG C E  D AR +FE +E ++ ++WN++I+  S+       F L   M 
Sbjct: 179 VILGNTIVNMYGKCGE-VDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMD 237

Query: 183 REGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            +G    L+PN+ T  S+I A A+   +    ++ +I+A     GL SD  V +ALV+ +
Sbjct: 238 LDG----LRPNKITLVSVIDACAWMQSIVRGRIVHEIVA---GEGLESDNTVANALVNLY 290

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLM-------EGRRK-------------------- 274
            + G    AR   E +  ++ +S   L+        G+R                     
Sbjct: 291 GKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFV 350

Query: 275 --------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF-RFMIG 319
                         G+E+H  L  SG+     +   LV+MY KCG  D +R  F R    
Sbjct: 351 NLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDV 410

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           +D   WN +++        +E +  F  M   G+     + +S L +CASL  + LG+  
Sbjct: 411 RDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLT 470

Query: 380 HGEGLKLGLDSDVSVSNA------LLSLYADAGYLSRCLKVFFLMPE---HDQVSWNSVI 430
           H   L+ GL    +V++A      ++++YA  G L+     F         D V+W++++
Sbjct: 471 HSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMV 530

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
            A++    L  EA++ +  M++ G  P+ V+F++ +A  S
Sbjct: 531 AAYSQF-GLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCS 569



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/373 (22%), Positives = 159/373 (42%), Gaps = 67/373 (17%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           ++ H  +   G   D  + N L+N+Y + G L +A    + +  R+ +SW  +++ Y   
Sbjct: 265 RIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARH 324

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G    A  + K M   G  L+ +   ++L +C     +    G ++H  + +S    D +
Sbjct: 325 GHGKRAIAVIKRMDHEGVKLDSFTFVNLLESC--VAIAALALGEEIHDRLAESGIELDPV 382

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEI-ETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +   L+ MYG C  + D ARR F+ + + RD+  WN++++ Y  R        +F+RM  
Sbjct: 383 LQTALVDMYGKC-GNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSL 441

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           +G    + P+  TF S++ A  S    G                                
Sbjct: 442 QG----VAPDAVTFLSILDACASLAALG-------------------------------- 465

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
           LG   ++R +   +  +  V+   L+                           ++NMYAK
Sbjct: 466 LGRLTHSRMLERGLFDRQAVASADLLT------------------------TSVINMYAK 501

Query: 304 CGTIDDSRSVF---RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           CG++ D+++ F   R     D V+W+ M++   Q G  EEA+  F +M+++G+   + S 
Sbjct: 502 CGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSF 561

Query: 361 ISTLSSCASLGWI 373
           +S ++ C+  G +
Sbjct: 562 VSAIAGCSHSGLV 574


>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Glycine max]
          Length = 887

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 252/824 (30%), Positives = 421/824 (51%), Gaps = 55/824 (6%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N L+ ++ R+  +   +   + + + + + W  ++  Y+   +  EA K ++ M   G  
Sbjct: 66  NPLLQIHARL-IVQQCTLAPNSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLE 124

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
            ++Y    VL+AC   G   F  G+ +H  +       D  +   L+ MY   +   D A
Sbjct: 125 PDKYTFTFVLKACT--GALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCK-MGHLDNA 181

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
           R++F+++  +D+ SWN++IS  SQ  +     ++F RMQ E     ++P+  +  +L  A
Sbjct: 182 RKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEE---GVEPDSVSILNLAPA 238

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
              S L      + I   V +  +     V ++L+  +++ G    A +IF+QM  K+ +
Sbjct: 239 V--SRLEDVDSCKSIHGYVVRRCVFG--VVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDI 294

Query: 264 SMNGLMEGR-----------------------------------------RKGKEVHGYL 282
           S   +M G                                           KGKEVH Y 
Sbjct: 295 SWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYA 354

Query: 283 IRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
           ++ G+   + V   +V+MYAKCG +  ++  F  + G+D V W+  +S L Q G   EA+
Sbjct: 355 LQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEAL 414

Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
             F  M+ +GL      L S +S+CA +    LG+ +H   +K  + SD+SV+  L+S+Y
Sbjct: 415 SIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMY 474

Query: 403 ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTF 462
                    + +F  M   D V+WN++I  F         A++ +L ++ +G  P+  T 
Sbjct: 475 TRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKC-GDPRLALEMFLRLQLSGVQPDSGTM 533

Query: 463 INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
           +++L+A +      LG   H  +IK  + +E  ++ AL+  Y KCG +   E +F     
Sbjct: 534 VSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKH 593

Query: 523 RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME 582
            +DEVSWN MI+GY+HN    +A++    M     R +  TF T+L A + ++ L   M 
Sbjct: 594 VKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMA 653

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
            HAC +R       +IG++L+DMY+K G++ Y+ + F  M  +   SWN+M+SGYA HG 
Sbjct: 654 FHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYAMHGQ 713

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
           G+ AL LFS M+      D V+++ VLSAC HAGL+ EG   F+SM++ + L P +E ++
Sbjct: 714 GEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYA 773

Query: 703 CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
           CMVDLLG AG  D++   I+KMP  P++ +W  +LGAC   +    +LG  A + L ++E
Sbjct: 774 CMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHS--NVKLGEIALHHLLKLE 831

Query: 763 PQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
           P+NAV+Y++L+++YA  G+W D  + R  M +  +KK  G SWV
Sbjct: 832 PRNAVHYIVLSDIYAQCGRWIDARRTRSNMTDHGLKKNPGYSWV 875



 Score =  236 bits (601), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 188/683 (27%), Positives = 318/683 (46%), Gaps = 66/683 (9%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  I       DVF+   L+++Y ++G L +A K+FD+MP ++  SW  ++SG +    
Sbjct: 149 IHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSN 208

Query: 67  SNEACKMFKEM-VRAGF------LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
             EA ++F+ M +  G       +LN     S L     C          +H  V++  +
Sbjct: 209 PCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCK--------SIHGYVVR--R 258

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
              G+VSN LI MY  C E    A +IF+++  +D ISW ++++ Y   G    V +L  
Sbjct: 259 CVFGVVSNSLIDMYSKCGE-VKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLD 317

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSS-----------------VLSGSYLLQQILAMV 222
            M+R+     +K N+ +  + + AA  +                 + S   +   I++M 
Sbjct: 318 EMKRK----HIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMY 373

Query: 223 KKAGLLS------------DLYVGSALVSGFARLGNFYYARKIFEQM----------IQK 260
            K G L             DL V SA +S   + G    A  IF++M          I  
Sbjct: 374 AKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILS 433

Query: 261 NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
           ++VS    +   R GK +H Y+I++ +   ++V   LV+MY +C +   + ++F  M  K
Sbjct: 434 SLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYK 493

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D V+WNT+I+G  + G    A+  F  ++  G+   + +++S LS+CA L  + LG   H
Sbjct: 494 DVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFH 553

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE-HDQVSWNSVIGAFADSEAL 439
           G  +K G++S++ V  AL+ +YA  G L     +F L     D+VSWN +I  +  +   
Sbjct: 554 GNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHN-GC 612

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
            +EA+  +  M+     PN VTF+ IL A S  S+ +     HA +I+    + T I N+
Sbjct: 613 ANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNS 672

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L+  Y K G++   EK F  M E +  +SWN+M+SGY  +     A+ L   M +    +
Sbjct: 673 LIDMYAKSGQLSYSEKCFHEM-ENKGTISWNAMLSGYAMHGQGEVALALFSLMQETHVPV 731

Query: 560 DHFTFATVLSACASVATLERGMEV-HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
           D  ++ +VLSAC     ++ G  +  +   +  LE  +   + +VD+    G  D     
Sbjct: 732 DSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCL 791

Query: 619 FDLMPVR-NVYSWNSMISGYARH 640
            D MP   +   W +++     H
Sbjct: 792 IDKMPTEPDAQVWGALLGACKMH 814



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 217/475 (45%), Gaps = 53/475 (11%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H   L+ G   D+ +   ++++Y + G+L  A + F  +  R+ V W+  +S  
Sbjct: 345 EKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSAL 404

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G   EA  +F+EM   G   ++  L S++ AC E   S  + G  +HC V+K++   
Sbjct: 405 VQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSS--RLGKMMHCYVIKADMGS 462

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V+  L++MY  C +S   A  +F  +  +D+++WN++I+ +++ GD     ++F R+
Sbjct: 463 DISVATTLVSMYTRC-KSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRL 521

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
           Q  G    ++P+  T  SL++A   ++L   YL       + K G+ S+++V  AL+  +
Sbjct: 522 QLSG----VQPDSGTMVSLLSAC--ALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMY 575

Query: 242 ARLG------NFYYARK--------------------------IFEQM----IQKNVVSM 265
           A+ G      N ++  K                           F QM    ++ N+V+ 
Sbjct: 576 AKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTF 635

Query: 266 NGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
             ++         R+    H  +IR G      +GN L++MYAK G +  S   F  M  
Sbjct: 636 VTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMEN 695

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
           K ++SWN M+SG   +G  E A+  F  M+   +   + S IS LS+C   G I  G+ I
Sbjct: 696 KGTISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNI 755

Query: 380 -HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
                 K  L+  +     ++ L   AG     L +   MP E D   W +++GA
Sbjct: 756 FQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGA 810



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 165/359 (45%), Gaps = 31/359 (8%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           S+  K+ H  ++K     D+ +  TL+++Y R      A  LF+ M  ++ V+W  +++G
Sbjct: 445 SRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLING 504

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           +T  G    A +MF  +  +G   +   + S+L AC          G+  H  ++K+   
Sbjct: 505 FTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALL--DDLYLGICFHGNIIKNGIE 562

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFE-EIETRDLISWNSIISVYSQRGDTISVFKLFS 179
            +  V   LI MY  C  S   A  +F      +D +SWN +I+ Y   G        F+
Sbjct: 563 SEMHVKVALIDMYAKC-GSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFN 621

Query: 180 RMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           +M+ E    S++PN  TF +++ A +Y S+L  +       A + + G +S   +G++L+
Sbjct: 622 QMKLE----SVRPNLVTFVTILPAVSYLSILREAMAFH---ACIIRMGFISSTLIGNSLI 674

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY-LIRSGLFDMVAVGN-- 295
             +A+ G   Y+ K F +M  K  +S N ++ G      +HG   +   LF ++   +  
Sbjct: 675 DMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGY----AMHGQGEVALALFSLMQETHVP 730

Query: 296 ----GLVNMYAKC---GTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAI 342
                 +++ + C   G I + R++F+ M  K ++      +  M+  L   G ++E +
Sbjct: 731 VDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVL 789


>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 280/934 (29%), Positives = 451/934 (48%), Gaps = 78/934 (8%)

Query: 7   FHLQILKHGFAYD-VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY-THK 64
            H QI+K     + V +  +++  Y++ GD  SA+K+F     RN + W   +  + +  
Sbjct: 50  LHAQIIKMPKKRNLVTMDGSMMRNYLQFGDFESATKVFFVGFARNYLLWNSFIEEFASFG 109

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G S+E   +FKE+   G   +  AL  VL+ C          GM+VH  ++K     D  
Sbjct: 110 GDSHEILAVFKELHDKGVKFDSKALTVVLKIC--LALMELWLGMEVHACLVKRGFHVDVH 167

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           +S  LI +Y   L   D A ++F+E   ++   WN+I+    +        +LF RMQ  
Sbjct: 168 LSCALINLYEKYL-GIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFRRMQSA 226

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
               S K  + T   L+ A     L      +QI   V + G +S+  + +++VS ++R 
Sbjct: 227 ----SAKATDGTIVKLLQAC--GKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRN 280

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
                AR  F+     N  S N ++                      AV + L   +   
Sbjct: 281 NRLELARVAFDSTEDHNSASWNSIISS-------------------YAVNDCLNGAWDLL 321

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
             ++ S       +  D ++WN+++SG    G YE  + NF +++  G    + S+ S L
Sbjct: 322 QEMESSG------VKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSAL 375

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +   LG   LG++IHG  ++  L+ DV V  +L+  Y     L +   VF      +  
Sbjct: 376 QAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNIC 435

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           +WNS+I  +   + L   A K    M+  G  P+ VT+                      
Sbjct: 436 AWNSLISGYT-YKGLFDNAEKLLNQMKEEGIKPDLVTW---------------------- 472

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE---RRDEVSWNSMISGYIHNEL 541
                        N+L+S Y   G  ++   +  R+       + VSW +MISG   NE 
Sbjct: 473 -------------NSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNEN 519

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
              A+     M +   + +  T  T+L ACA  + L+ G E+H   +R     D+ I +A
Sbjct: 520 YMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATA 579

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+DMY K G++  A   F  +  + +  WN M+ GYA +GHG++  TLF +M+  G  PD
Sbjct: 580 LIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPD 639

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            +TF  +LS C ++GLV +G+K+F SM   Y + P +E +SCMVDLLG+AG LD+  +FI
Sbjct: 640 AITFTALLSGCKNSGLVMDGWKYFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDFI 699

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
           + +P   ++ IW  VL A CR + +  ++   AA  L  +EP N+ NY L+ N+Y++  +
Sbjct: 700 HAVPQKADASIWGAVLAA-CRLH-KDIKIAEIAARNLLRLEPYNSANYALMMNIYSTFDR 757

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           W DV + +++M    VK     SW+ +K  +HVF    +SHPE+  IY +L +L  +++ 
Sbjct: 758 WGDVERLKESMTALGVKIPNVWSWIQVKQTIHVFSTEGKSHPEEGEIYFELYQLISEIKK 817

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNS-KLPIRIMKNLRVCGDCHSA 900
            GYV        +++   KE ++  H+EK+A+ + L +     PIR++KN R+C DCH+ 
Sbjct: 818 LGYVLDINCVHQNIDDSEKEKVLLSHTEKLAMTYGLMKTKGGSPIRVVKNTRICHDCHTT 877

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            K+IS    REI LRD  RFHHF +G+CSC D W
Sbjct: 878 AKYISLARNREIFLRDGGRFHHFMNGECSCKDRW 911



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 146/585 (24%), Positives = 257/585 (43%), Gaps = 49/585 (8%)

Query: 276 KEVHGYLIR-SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           +E+H  +I+     ++V +   ++  Y + G  + +  VF     ++ + WN+ I     
Sbjct: 48  RELHAQIIKMPKKRNLVTMDGSMMRNYLQFGDFESATKVFFVGFARNYLLWNSFIEEFAS 107

Query: 335 -NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
             G   E +  F  +   G+   + +L   L  C +L  + LG ++H   +K G   DV 
Sbjct: 108 FGGDSHEILAVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLVKRGFHVDVH 167

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           +S AL++LY     +    +VF   P  +   WN+++ A   SE    +A++ +  M+ A
Sbjct: 168 LSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKW-EDALELFRRMQSA 226

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
                  T + +L A         G Q+H  VI++   + T+I N+++S Y +   ++  
Sbjct: 227 SAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELA 286

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS---- 569
              F   +E  +  SWNS+IS Y  N+ L  A +L+  M   G + D  T+ ++LS    
Sbjct: 287 RVAFDS-TEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLL 345

Query: 570 ----------------------ACASVATLER---------GMEVHACGVRACLEFDVVI 598
                                 +C+  + L+          G E+H   +R+ LE+DV +
Sbjct: 346 QGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYV 405

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
            ++LVD Y K   +D A   F     +N+ +WNS+ISGY   G  D A  L +QMK +G 
Sbjct: 406 CTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGI 465

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
            PD VT+  ++S  S +G  +E       +  + GL P +  ++ M+    +        
Sbjct: 466 KPDLVTWNSLVSGYSMSGRSEEALAVINRIKSL-GLTPNVVSWTAMISGCCQNENYMDAL 524

Query: 719 EFINKMP---ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANM 775
           +F ++M    + PNS    T+L AC  ++  K        +M         +   L+ +M
Sbjct: 525 QFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALI-DM 583

Query: 776 YASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           Y  GGK +   +  + +KE    K   C W  M  G  ++  G+E
Sbjct: 584 YGKGGKLKVAHEVFRNIKE----KTLPC-WNCMMMGYAIYGHGEE 623



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 214/478 (44%), Gaps = 58/478 (12%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H  +++ G   +  +CN+++++Y R   L  A   FD   D NS SW  I+S Y 
Sbjct: 250 EGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYA 309

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVL----------------RACQECG--PSG- 103
                N A  + +EM  +G   +     S+L                R+ Q  G  P   
Sbjct: 310 VNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSC 369

Query: 104 --------------FKFGMQVHCLVLKSNQTFDGLVSNVLIAMY--GSCLESTDCARRIF 147
                         F  G ++H  +++S   +D  V   L+  Y    CL   D A  +F
Sbjct: 370 SITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCL---DKAEVVF 426

Query: 148 EEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS 207
              + +++ +WNS+IS Y+ +G   +  KL ++M+ EG    +KP+  T+ SL++    S
Sbjct: 427 HHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEG----IKPDLVTWNSLVSGYSMS 482

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV----V 263
             S   L   ++  +K  GL  ++   +A++SG  +  N+  A + F QM ++NV     
Sbjct: 483 GRSEEAL--AVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEENVKPNST 540

Query: 264 SMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
           ++  L+         + G+E+H + +R G  D + +   L++MY K G +  +  VFR +
Sbjct: 541 TICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFRNI 600

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
             K    WN M+ G    G  EE    F  MR+ G+     +  + LS C + G +M G 
Sbjct: 601 KEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCKNSGLVMDGW 660

Query: 378 QIHGEGLKLGLDSDVSVSN--ALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
           + + + +K   + + ++ +   ++ L   AG+L   L     +P+    S W +V+ A
Sbjct: 661 K-YFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDFIHAVPQKADASIWGAVLAA 717



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 156/356 (43%), Gaps = 26/356 (7%)

Query: 480 QVHAQVIKY-NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
           ++HAQ+IK     N  T++ +++  Y + G+ +   K+F  +   R+ + WNS I  +  
Sbjct: 49  ELHAQIIKMPKKRNLVTMDGSMMRNYLQFGDFESATKVFF-VGFARNYLLWNSFIEEFAS 107

Query: 539 -----NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
                +E+L     L      +G + D      VL  C ++  L  GMEVHAC V+    
Sbjct: 108 FGGDSHEILAVFKEL----HDKGVKFDSKALTVVLKICLALMELWLGMEVHACLVKRGFH 163

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
            DV +  AL+++Y K   ID A++ FD  P++  + WN+++    R    + AL LF +M
Sbjct: 164 VDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFRRM 223

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGE 713
           +         T V +L AC     ++EG K        +G +      + +V +  R   
Sbjct: 224 QSASAKATDGTIVKLLQACGKLRALNEG-KQIHGYVIRFGRVSNTSICNSIVSMYSRNNR 282

Query: 714 LDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLA 773
           L+      +      NS  W +++ +    +C        A ++L EME       ++  
Sbjct: 283 LELARVAFDSTE-DHNSASWNSIISSYAVNDCLN-----GAWDLLQEMESSGVKPDIITW 336

Query: 774 NMYASG----GKWEDVAKARKAMKEAEVKKEAGCSWVTMKD---GVHVFVAGDESH 822
           N   SG    G +E+V    ++++ A  K ++ CS  +      G+  F  G E H
Sbjct: 337 NSLLSGHLLQGSYENVLTNFRSLQSAGFKPDS-CSITSALQAVIGLGCFNLGKEIH 391


>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
 gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
          Length = 712

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 227/639 (35%), Positives = 359/639 (56%), Gaps = 14/639 (2%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           ++  YA  G ++D+  +F  M  KD +SWN+M+ G  + G    A   F  M    ++S 
Sbjct: 87  MIGGYADEGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLTMACNMFDKMSERNVVS- 145

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
                + ++     G + + + +     ++    DV+  N+++  +   G +   +++F 
Sbjct: 146 ---WTTIINGLLEFGRVEVAECL----FRVMPTKDVTAWNSMVHGFFSNGRVEDAIELFE 198

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            MP  + +SW SVIG   D      EA+  +  M  A +     T    L A ++     
Sbjct: 199 KMPNRNVISWTSVIGGL-DHNGRSFEALVVFHKML-ASFKATSSTLACALTACANICTPF 256

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY 536
           +G Q+H  ++K        I  +L+S Y  C  +D+   IF   +  R+ V W ++++GY
Sbjct: 257 IGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFND-NVSRNVVVWTALLTGY 315

Query: 537 IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
             N     A+ +   MM+     +  +  + L++C  +  ++RG EVHA   +  LE D+
Sbjct: 316 GLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDI 375

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
            + ++LV MY+KCG I+     F  M  +NV SWNS+I G A+HG G  ALTLF+QM   
Sbjct: 376 FVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRT 435

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
              PD +T  G+LSAC H+G++ +G   FK   + +G+    E +S MVDLLGR G+L++
Sbjct: 436 RVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEE 495

Query: 717 IEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMY 776
            E  I+ MP   N ++W  +L +    N     +  +AA  + +++P  +  Y LL+N+Y
Sbjct: 496 AEALIHIMPGKANYMVWLALLSS--SINHSNVHVAERAAKCVLDLQPNCSAAYTLLSNLY 553

Query: 777 ASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELN 836
           AS GKW +V+K RK MK+  + K+ G SW+T+K   H F++GD+SHP    IY+KL+ L 
Sbjct: 554 ASTGKWTEVSKIRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLG 613

Query: 837 QKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCG 895
            K+++ GYVP  KF+  D+E E KE+++SYHSE++A+ F L    +   I +MKNLR+CG
Sbjct: 614 GKLKELGYVPDPKFSFHDVETEQKEEMLSYHSERLAIGFGLISTVEGSTIIVMKNLRICG 673

Query: 896 DCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           DCH+A K  SK+VGREIV+RD +RFHHF++G CSCGDYW
Sbjct: 674 DCHNAVKLTSKVVGREIVVRDPSRFHHFHNGTCSCGDYW 712



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 203/419 (48%), Gaps = 11/419 (2%)

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS----MNGLMEGRRKGKEVHGYLI 283
           + DL   ++++ G  + G+   A  +F++M ++NVVS    +NGL+E  R   EV   L 
Sbjct: 109 VKDLISWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRV--EVAECLF 166

Query: 284 RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
           R      V   N +V+ +   G ++D+  +F  M  ++ +SW ++I GLD NG   EA++
Sbjct: 167 RVMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALV 226

Query: 344 NFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            F  M      +++ +L   L++CA++    +G QIHG  +K G   +  +S +L+S YA
Sbjct: 227 VFHKMLAS-FKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYA 285

Query: 404 DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
           +   +     +F      + V W +++  +       ++A++ +  M R    PN  +  
Sbjct: 286 NCKLIDNASSIFNDNVSRNVVVWTALLTGYG-LNCRHTDALQVFKGMMRMSVLPNQSSLT 344

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           + L +         G +VHA   K  + ++  + N+L+  Y KCG ++D   +F RMS R
Sbjct: 345 SALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMS-R 403

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM-E 582
           ++ VSWNS+I G   +     A+ L   M++     D  T A +LSAC     L +G   
Sbjct: 404 KNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCF 463

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARH 640
               G    +E      S++VD+  + G+++ A     +MP + N   W +++S    H
Sbjct: 464 FKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSINH 522



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 167/340 (49%), Gaps = 33/340 (9%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV   N++++ +   G +  A +LF++MP+RN +SW  ++ G  H G S EA  +F +M+
Sbjct: 173 DVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKML 232

Query: 79  RAGFLLNRYALGSVLRACQE-CGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
            A F      L   L AC   C P     G+Q+H L++K+   F+  +S  LI+ Y +C 
Sbjct: 233 -ASFKATSSTLACALTACANICTPF---IGVQIHGLIVKTGYCFNEYISASLISFYANC- 287

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYS---QRGDTISVFKLFSRMQREGFRYSLKPNE 194
           +  D A  IF +  +R+++ W ++++ Y    +  D + VFK   RM       S+ PN+
Sbjct: 288 KLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRM-------SVLPNQ 340

Query: 195 YTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK 252
            +  S + +     +V  G    +++ A+  K GL SD++V ++LV  + + G+      
Sbjct: 341 SSLTSALNSCCGLEAVDRG----REVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIA 396

Query: 253 IFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT 306
           +F +M +KNVVS N ++ G       R    +   +IR+ +        GL++     G 
Sbjct: 397 VFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGM 456

Query: 307 IDDSRSVFR-----FMIGKDSVSWNTMISGLDQNGCYEEA 341
           +   R  F+     F I   +  +++M+  L + G  EEA
Sbjct: 457 LTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEA 496



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 118/477 (24%), Positives = 196/477 (41%), Gaps = 63/477 (13%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           V L   +I  Y   G L  A KLF EMP ++ +SW  ++ G    G    AC MF +M  
Sbjct: 81  VNLYTMMIGGYADEGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLTMACNMFDKMSE 140

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
                N  +  +++    E G       ++V   + +   T D    N ++  + S    
Sbjct: 141 R----NVVSWTTIINGLLEFGR------VEVAECLFRVMPTKDVTAWNSMVHGFFSNGRV 190

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
            D A  +FE++  R++ISW S+I      G +     +F +M       S K    T   
Sbjct: 191 ED-AIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKMLA-----SFKATSSTLAC 244

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
            +TA  +  +   ++  QI  ++ K G   + Y+ ++L+S +A       A  IF   + 
Sbjct: 245 ALTACAN--ICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVS 302

Query: 260 KNVVSMNGLMEGR-----------------------------------------RKGKEV 278
           +NVV    L+ G                                           +G+EV
Sbjct: 303 RNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREV 362

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           H    + GL   + V N LV MY KCG I+D  +VF  M  K+ VSWN++I G  Q+G  
Sbjct: 363 HAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFG 422

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE-GLKLGLDSDVSVSNA 397
             A+  F  M R  +     +L   LS+C   G +  G+      G   G++      ++
Sbjct: 423 RWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSS 482

Query: 398 LLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFAD-SEALVSE-AVKYYLDMR 451
           ++ L    G L     +  +MP + + + W +++ +  + S   V+E A K  LD++
Sbjct: 483 MVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSINHSNVHVAERAAKCVLDLQ 539



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 170/370 (45%), Gaps = 18/370 (4%)

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           V++   ++  YAD G L   LK+F+ MP  D +SWNS++        L + A   +  M 
Sbjct: 81  VNLYTMMIGGYADEGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDL-TMACNMFDKMS 139

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
                 N V++  I+     F  G++  +V   + +     + T  N+++  +   G ++
Sbjct: 140 ER----NVVSWTTIINGLLEF--GRV--EVAECLFRVMPTKDVTAWNSMVHGFFSNGRVE 191

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
           D  ++F +M   R+ +SW S+I G  HN    +A+ +V+  M    +    T A  L+AC
Sbjct: 192 DAIELFEKMPN-RNVISWTSVIGGLDHNGRSFEAL-VVFHKMLASFKATSSTLACALTAC 249

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           A++ T   G+++H   V+    F+  I ++L+  Y+ C  ID AS  F+    RNV  W 
Sbjct: 250 ANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWT 309

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           ++++GY  +     AL +F  M     LP+  +    L++C     VD G +   +++  
Sbjct: 310 ALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRG-REVHAVAHK 368

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
            GL   +   + +V +  + G ++       +M    N + W +++       C +   G
Sbjct: 369 LGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMS-RKNVVSWNSII-----VGCAQHGFG 422

Query: 752 RKAANMLFEM 761
           R A  +  +M
Sbjct: 423 RWALTLFAQM 432



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 7/197 (3%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  I+K G+ ++ ++  +LI+ Y     + +AS +F++   RN V W  +++GY     
Sbjct: 261 IHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCR 320

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             +A ++FK M+R   L N+ +L S L +C  CG      G +VH +  K     D  VS
Sbjct: 321 HTDALQVFKGMMRMSVLPNQSSLTSALNSC--CGLEAVDRGREVHAVAHKLGLESDIFVS 378

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+ MY  C    D    +F  +  ++++SWNSII   +Q G       LF++M     
Sbjct: 379 NSLVVMYTKCGHIND-GIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQM----I 433

Query: 187 RYSLKPNEYTFGSLITA 203
           R  + P+E T   L++A
Sbjct: 434 RTRVDPDEITLAGLLSA 450



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 15/196 (7%)

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM 553
           T   N LLS + + G +D+   +F +MS     + +  MI GY     L  A+ L + M 
Sbjct: 50  TPPSNYLLSFHLRNGRIDEARSLFNKMSSPGVNL-YTMMIGGYADEGRLEDALKLFYEMP 108

Query: 554 QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL-EFDVVIGSALVDMYSKCGRI 612
            +    D  ++ ++L  C     L+ G    AC +   + E +VV  + +++   + GR+
Sbjct: 109 VK----DLISWNSMLKGC-----LKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRV 159

Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
           + A   F +MP ++V +WNSM+ G+  +G  + A+ LF +M    P  + +++  V+   
Sbjct: 160 EVAECLFRVMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKM----PNRNVISWTSVIGGL 215

Query: 673 SHAGLVDEGFKHFKSM 688
            H G   E    F  M
Sbjct: 216 DHNGRSFEALVVFHKM 231



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 41/88 (46%)

Query: 13  KHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACK 72
           K G   D+F+ N+L+ +Y + G +     +F  M  +N VSW  I+ G    G    A  
Sbjct: 368 KLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALT 427

Query: 73  MFKEMVRAGFLLNRYALGSVLRACQECG 100
           +F +M+R     +   L  +L AC   G
Sbjct: 428 LFAQMIRTRVDPDEITLAGLLSACGHSG 455



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 31/164 (18%)

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+  + + GRID A   F+ M    V  +  MI GYA  G  + AL LF +M    P+ D
Sbjct: 56  LLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEM----PVKD 111

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQ------------------------VYGLIP- 696
            +++  +L  C   G +      F  MS+                        ++ ++P 
Sbjct: 112 LISWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVAECLFRVMPT 171

Query: 697 -QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
             +  ++ MV      G ++   E   KMP   N + W +V+G 
Sbjct: 172 KDVTAWNSMVHGFFSNGRVEDAIELFEKMP-NRNVISWTSVIGG 214


>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/615 (37%), Positives = 342/615 (55%), Gaps = 45/615 (7%)

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA--DAGYLSRCLKVF 415
           + L+S L  C     I   +Q+H   ++ GL     V   L+ +    D    S  L VF
Sbjct: 43  WRLMSILHDCTLFSQI---KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVF 99

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
             +   +   W ++I  +A  + L+SE+  +Y  MRR G  P   TF  +  A  +    
Sbjct: 100 GQVNYPNPFLWTAMIRGYA-LQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNM 158

Query: 476 KLGHQVHAQVIKY-NVANETTIENALLSCYGKCGEMDDCEKIFARMSER----------- 523
            LG QVHAQ I     A++  + N+++  Y KCG +    K+F  MSER           
Sbjct: 159 DLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVA 218

Query: 524 -------------------RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
                              +D V+W +M++GY  N    +A+     M   G   D  T 
Sbjct: 219 YAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTL 278

Query: 565 ATVLSACASVATLERGMEVHACGVRACL--EFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           A V+SACA +  ++    +     R+      +VV+GSAL+DMYSKCG  D A + F++M
Sbjct: 279 AGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVM 338

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
             RNV+S++SMI GYA HG    AL LF  M      P+ VTF+G+LSACSHAGLV++G 
Sbjct: 339 KERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGR 398

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-C 741
           + F  M + +G+ P  + ++CMVDLLGRAG L++  + +  MP+ PN  +W  +LGAC  
Sbjct: 399 QLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRI 458

Query: 742 RANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA 801
             N    ++ + AAN LF++EP    NY+LL+N+YAS G+WE+V+K RK ++E   KK  
Sbjct: 459 HGN---PDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNP 515

Query: 802 GCSWVTMKDG-VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESK 860
           GCSW   K+G +H F AGD +HP    I + LK+L +++R  GY P    A +DL  + K
Sbjct: 516 GCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEK 575

Query: 861 EDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNR 919
           E ++  HSEK+A+A+ +L   +   I+IMKN+R+C DCH+     S+I GREI++RD+ R
Sbjct: 576 ERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMR 635

Query: 920 FHHFNDGKCSCGDYW 934
           FHHF++G CSCG++W
Sbjct: 636 FHHFHNGTCSCGNFW 650



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 188/420 (44%), Gaps = 62/420 (14%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF--MIGKDSVSWNTMISGLD 333
           K+VH ++IR+GL     V   L+ M  K      S  +  F  +   +   W  MI G  
Sbjct: 59  KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYA 118

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG-LDSDV 392
             G   E+   +  MRRDG+   +F+  +   +C +   + LG+Q+H + + +G   SD+
Sbjct: 119 LQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDL 178

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA---DSE------------ 437
            V N+++ LY   G+L    KVF  M E D VSW  +I A+A   D E            
Sbjct: 179 YVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSK 238

Query: 438 ------ALVS---------EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
                 A+V+         EA++Y+  M+  G   + VT   +++A +     +LG   H
Sbjct: 239 DMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACA-----QLGAVKH 293

Query: 483 AQVIK-------YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           A  I+       +  +    + +AL+  Y KCG  D+  K+F  M E R+  S++SMI G
Sbjct: 294 ANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKE-RNVFSYSSMILG 352

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
           Y  +     A+ L   M++   R +  TF  +LSAC+    +E+G ++ A       + +
Sbjct: 353 YAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFA-------KME 405

Query: 596 VVIGSA--------LVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKA 646
              G A        +VD+  + G ++ A      MP+  N   W +++     HG+ D A
Sbjct: 406 KFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIA 465



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 105/446 (23%), Positives = 191/446 (42%), Gaps = 67/446 (15%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASK---LFDEMPDRNSVSWACIVSGY 61
           K  H  I+++G +   ++   LI +  +V D+   S    +F ++   N   W  ++ GY
Sbjct: 59  KQVHAHIIRNGLSQCSYVLTKLIRMLTKV-DVPMGSYPLLVFGQVNYPNPFLWTAMIRGY 117

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHC-LVLKSNQT 120
             +G+ +E+   +  M R G     +   ++ +AC          G QVH   +L     
Sbjct: 118 ALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACG--AALNMDLGKQVHAQTILIGGFA 175

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D  V N +I +Y  C     CAR++F+E+  RD++SW  +I  Y++ GD  S   LF  
Sbjct: 176 SDLYVGNSMIDLYVKC-GFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDD 234

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           +  +                                             D+   +A+V+G
Sbjct: 235 LPSK---------------------------------------------DMVAWTAMVTG 249

Query: 241 FARLGNFYYARKIFEQM----IQKNVVSMNGLMEG-RRKGKEVHGYLIRS-------GLF 288
           +A+ G    A + F++M    ++ + V++ G++    + G   H   IR        G  
Sbjct: 250 YAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPS 309

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
             V VG+ L++MY+KCG+ D++  VF  M  ++  S+++MI G   +G    A+  F  M
Sbjct: 310 GNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDM 369

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSLYADAGY 407
            +  +  +  + I  LS+C+  G +  G+Q+  +  K  G+         ++ L   AG 
Sbjct: 370 LKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGC 429

Query: 408 LSRCLKVFFLMP-EHDQVSWNSVIGA 432
           L   L +   MP E +   W +++GA
Sbjct: 430 LEEALDLVKTMPMEPNGGVWGALLGA 455



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/257 (19%), Positives = 111/257 (43%), Gaps = 12/257 (4%)

Query: 547 NLVWF-MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
           N + F  +Q  ++L  +   ++L  C   + ++   +VHA  +R  L     + + L+ M
Sbjct: 27  NFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIK---QVHAHIIRNGLSQCSYVLTKLIRM 83

Query: 606 YSKCGRI--DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
            +K       Y    F  +   N + W +MI GYA  G   ++   +++M+ DG  P   
Sbjct: 84  LTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSF 143

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TF  +  AC  A  +D G +       + G    L   + M+DL  + G L    +  ++
Sbjct: 144 TFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDE 203

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
           M    + + W  ++ A  +    ++     A+ +  ++  ++ V +  +   YA  G+ +
Sbjct: 204 MS-ERDVVSWTELIVAYAKYGDMES-----ASGLFDDLPSKDMVAWTAMVTGYAQNGRPK 257

Query: 784 DVAKARKAMKEAEVKKE 800
           +  +  + M++  ++ +
Sbjct: 258 EALEYFQKMQDVGMETD 274


>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 676

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 228/645 (35%), Positives = 354/645 (54%), Gaps = 17/645 (2%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDS--VSWNTMISGLDQNGCYEEAIMNFCAM----RR 350
           L   YA+ G +  + S         S   +WN +++   +     EA+  F A+    R 
Sbjct: 42  LATAYARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASPHEALRVFRALPPAARP 101

Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
           D   S+ F+L   LS+CA LG +  G+ +       G  +D+ V +++L+LYA  G +  
Sbjct: 102 D---STTFTL--ALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDD 156

Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
            +KVF  M + D+V+W++++  F ++   V +A++ Y+ MRR G   + V  + ++ A +
Sbjct: 157 AVKVFDRMRKRDRVTWSTMVTGFVNAGQPV-QAIEMYMRMRRDGLEADEVVIVGVMQACA 215

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
           +    ++G  VH  ++++ +  +  I  +L+  Y K G  D   ++F  M  R D VSW+
Sbjct: 216 ATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRND-VSWS 274

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           ++IS         +A+ L   M   G   +       L AC+ +  L+ G  +H   +R 
Sbjct: 275 ALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRT 334

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
            LE D ++G+A++DMYSKCG +  A   FD +  R++ SWN MI+    HG G  AL+LF
Sbjct: 335 -LELDRMVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLF 393

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
            +MK +   PDH TF  +LSA SH+GLV+EG   F  M   YG+ P  +   C+VDLL R
Sbjct: 394 QEMKRNEVRPDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLAR 453

Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
           +G +++    +  +   P   I   +L  C   N  K ELG   A  + E++P +     
Sbjct: 454 SGLVEEANGLVASLHSKPTISILVALLSGCLNNN--KLELGESTAEKILELQPGDVGVLA 511

Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
           L++N+YA+   W  V + RK MK+   KK  GCS + ++  +H FV  D+SHP+   I +
Sbjct: 512 LVSNLYAAAKNWYKVREVRKLMKDHGSKKAPGCSSIEIRGALHTFVMEDQSHPQHRQILQ 571

Query: 831 KLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMK 889
            + +L+ +MR  GY+P+T+F   DLE   KE L+S HSE++A AF L   S    + ++K
Sbjct: 572 MVMKLDSEMRKMGYIPKTEFVYHDLEEGVKEQLLSRHSERLATAFGLLNTSPGTRLVVIK 631

Query: 890 NLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           NLRVCGDCH A K++SKI  REIV+RD+ RFHHF DG CSCGDYW
Sbjct: 632 NLRVCGDCHDAIKYMSKIADREIVVRDAKRFHHFKDGACSCGDYW 676



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 175/336 (52%), Gaps = 10/336 (2%)

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
           +G  + + V + ++N+YAKCG +DD+  VF  M  +D V+W+TM++G    G   +AI  
Sbjct: 132 AGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEM 191

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           +  MRRDGL +    ++  + +CA+ G   +G  +HG  L+  +  DV +S +L+ +YA 
Sbjct: 192 YMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAK 251

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
            G   +  +VF LMP  + VSW+++I   A       EA+  +  M+ +G  PN    + 
Sbjct: 252 NGLFDQARRVFELMPHRNDVSWSALISQLAQY-GNADEALGLFRMMQVSGLHPNSGPVVG 310

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
            L A S   + KLG  +H  +++  +  +  +  A++  Y KCG +   + +F ++   R
Sbjct: 311 ALLACSDLGLLKLGKSIHGFILR-TLELDRMVGTAVIDMYSKCGSLSSAQMLFDKVVS-R 368

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
           D +SWN MI+    +     A++L   M +   R DH TFA++LSA +    +E G    
Sbjct: 369 DLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEGKFWF 428

Query: 585 ACGVRACLEFDVVIGS----ALVDMYSKCGRIDYAS 616
            C V    E+ +  G      +VD+ ++ G ++ A+
Sbjct: 429 NCMVN---EYGIEPGEKHLVCIVDLLARSGLVEEAN 461



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 208/424 (49%), Gaps = 37/424 (8%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G+  D+F+C++++N+Y + G +  A K+FD M  R+ V+W+ +V+G+ + G   +A +M+
Sbjct: 133 GYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMY 192

Query: 75  KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYG 134
             M R G   +   +  V++AC   G +  + G  VH  +L+     D ++S  L+ MY 
Sbjct: 193 MRMRRDGLEADEVVIVGVMQACAATGDA--RMGASVHGYLLRHAMQMDVVISTSLVDMYA 250

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
                 D ARR+FE +  R+ +SW+++IS  +Q G+      LF  MQ  G   +  P  
Sbjct: 251 KN-GLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGP-- 307

Query: 195 YTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
              G+L+  +   +L    L + I   + +  L  D  VG+A++  +++ G+   A+ +F
Sbjct: 308 -VVGALLACSDLGLLK---LGKSIHGFILRT-LELDRMVGTAVIDMYSKCGSLSSAQMLF 362

Query: 255 EQMIQKNVVSMNGLM-----EGR-RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID 308
           ++++ ++++S N ++      GR R    +   + R+ +    A    L++  +  G ++
Sbjct: 363 DKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVE 422

Query: 309 DSRSVFRFMIGKDSVSWNT-----MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS---- 359
           + +  F  M+ +  +         ++  L ++G  EEA         +GL++S  S    
Sbjct: 423 EGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEA---------NGLVASLHSKPTI 473

Query: 360 --LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
             L++ LS C +   + LG+    + L+L    DV V   + +LYA A    +  +V  L
Sbjct: 474 SILVALLSGCLNNNKLELGESTAEKILELQ-PGDVGVLALVSNLYAAAKNWYKVREVRKL 532

Query: 418 MPEH 421
           M +H
Sbjct: 533 MKDH 536



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 166/353 (47%), Gaps = 46/353 (13%)

Query: 157 SWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF---------------GSLI 201
           +WN++++ +S+        ++F          + +P+  TF               G ++
Sbjct: 71  AWNALLAAHSRGASPHEALRVF-----RALPPAARPDSTTFTLALSACARLGDLATGEVV 125

Query: 202 TAAYSSVLSGS--YLLQQILAMVKKAGLLSDLY------------VGSALVSGFARLGNF 247
           T   S    G+  ++   +L +  K G + D                S +V+GF   G  
Sbjct: 126 TDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQP 185

Query: 248 YYARKIFEQM----IQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGL 297
             A +++ +M    ++ + V + G+M+        R G  VHGYL+R  +   V +   L
Sbjct: 186 VQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSL 245

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           V+MYAK G  D +R VF  M  ++ VSW+ +IS L Q G  +EA+  F  M+  GL  ++
Sbjct: 246 VDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNS 305

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
             ++  L +C+ LG + LG+ IHG  L+  L+ D  V  A++ +Y+  G LS    +F  
Sbjct: 306 GPVVGALLACSDLGLLKLGKSIHGFILRT-LELDRMVGTAVIDMYSKCGSLSSAQMLFDK 364

Query: 418 MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
           +   D +SWN +I A   +     +A+  + +M+R    P+  TF ++L+A S
Sbjct: 365 VVSRDLISWNVMI-ACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALS 416



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 94/422 (22%), Positives = 186/422 (44%), Gaps = 66/422 (15%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNS--VSWACIVSGYT 62
           +L  L I+    +    L + L   Y R GDLA+A       P   S   +W  +++ ++
Sbjct: 21  RLHALLIVSSSASCHHILSSCLATAYARAGDLAAAESTLATAPTSPSSIPAWNALLAAHS 80

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
                +EA ++F+ +  A    +       L AC   G      G  V      +    D
Sbjct: 81  RGASPHEALRVFRALPPAAR-PDSTTFTLALSACARLG--DLATGEVVTDRASGAGYGND 137

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V + ++ +Y  C  + D A ++F+ +  RD ++W+++++ +   G  +   +++ RM+
Sbjct: 138 IFVCSSVLNLYAKC-GAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMR 196

Query: 183 REGFRYSLKPNEYTFGSLIT--AAYSSVLSGS----YLLQQILAMVKKAGLLSDLYVGSA 236
           R+G    L+ +E     ++   AA      G+    YLL+  + M        D+ + ++
Sbjct: 197 RDG----LEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQM--------DVVISTS 244

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---------------------- 274
           LV  +A+ G F  AR++FE M  +N VS + L+    +                      
Sbjct: 245 LVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPN 304

Query: 275 -------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                              GK +HG+++R+   D + VG  +++MY+KCG++  ++ +F 
Sbjct: 305 SGPVVGALLACSDLGLLKLGKSIHGFILRTLELDRM-VGTAVIDMYSKCGSLSSAQMLFD 363

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            ++ +D +SWN MI+    +G   +A+  F  M+R+ +   + +  S LS+ +  G +  
Sbjct: 364 KVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEE 423

Query: 376 GQ 377
           G+
Sbjct: 424 GK 425



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 106/204 (51%), Gaps = 11/204 (5%)

Query: 3   DAKL---FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           DA++    H  +L+H    DV +  +L+++Y + G    A ++F+ MP RN VSW+ ++S
Sbjct: 219 DARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALIS 278

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
                G ++EA  +F+ M  +G   N   +   L AC + G    K G  +H  +L++ +
Sbjct: 279 QLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGL--LKLGKSIHGFILRTLE 336

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             D +V   +I MY  C  S   A+ +F+++ +RDLISWN +I+     G       LF 
Sbjct: 337 -LDRMVGTAVIDMYSKC-GSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQ 394

Query: 180 RMQREGFRYSLKPNEYTFGSLITA 203
            M+R   R    P+  TF SL++A
Sbjct: 395 EMKRNEVR----PDHATFASLLSA 414


>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
 gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
          Length = 679

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 231/682 (33%), Positives = 365/682 (53%), Gaps = 51/682 (7%)

Query: 260 KNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
           ++   +  L EGRR    +H  + R GL   V V N LV MY KCG+++++R VF     
Sbjct: 42  QSCARLGALAEGRR----IHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPA 97

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC-ASLGWIMLGQQ 378
           K+  SW  +I+   Q+G  +EA+  F  M + G+   + S  + +++C A   ++  G+ 
Sbjct: 98  KNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRA 157

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
           +H    + G    V  + +L+S+Y+  G L   ++ F  M E + VSWN++I AFA+   
Sbjct: 158 LHALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRR 217

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN 498
            + EA++    M           F+  + A S   +G                       
Sbjct: 218 GL-EALRTLQKM-----------FLEGIRACSDVVVG----------------------T 243

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
            L++ Y KC  + D    F ++ E  + ++WN +IS Y+ +    +AM L   M+  G  
Sbjct: 244 TLVNMYAKCSGLHDANAAFVKLQEP-NIITWNVLISAYVQHCCFKEAMELFRRMLLLGLE 302

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFD-VVIGSALVDMYSKCGRIDYASR 617
           +D  TF  +L AC     LE G  +HAC     L  +   + + +++MY KCG +  A  
Sbjct: 303 MDEVTFINILGACCVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSLQDAEA 362

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA-CSHAG 676
            F  M   +V +WN+MI+ Y +HGH  +AL  +  M+ +G +PD  T+V V+ A C++AG
Sbjct: 363 MFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDASCANAG 422

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
           L +E   +F SM Q +G+ P    + CMV+ LG+AG L   E  I  MP  P+ L W + 
Sbjct: 423 LPEEAHAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPDVLTWTSF 482

Query: 737 LGACCRANCRK---TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMK 793
           L     ANCR     + G+ AA     ++P+ +  YV LA ++A  G +++ ++ RK M 
Sbjct: 483 L-----ANCRSHGDMKRGKLAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLML 537

Query: 794 EAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALF 853
           +  ++K AG S + +   V+ F AGD+S+P    I+++LK L+++M+ AGY P       
Sbjct: 538 DRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKSAGYDPDMAHVAH 597

Query: 854 DLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREI 912
           D+E   KE L+  HSE++A+AF +++ +   P+RIMKNLRVCGDCH+  K  SKI  REI
Sbjct: 598 DVEAGQKEPLLFAHSERLAIAFGIISTSPGTPLRIMKNLRVCGDCHTMTKLTSKITRREI 657

Query: 913 VLRDSNRFHHFNDGKCSCGDYW 934
           ++RDSNRFHHF +G CSC D+W
Sbjct: 658 IVRDSNRFHHFKNGSCSCKDFW 679



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 193/418 (46%), Gaps = 47/418 (11%)

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           +T++S   Q G    AI +    R+D  +      +  + SCA LG +  G++IH    +
Sbjct: 7   STLLSKRQQLGQIAAAI-DALQKRKDADLKE---CVRVIQSCARLGALAEGRRIHQLMRR 62

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
           +GL SDV VSN L+ +Y   G L     VF   P  +  SW  +I   A       EA+ 
Sbjct: 63  VGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQ-HGRSQEALA 121

Query: 446 YYLDMRRAGWSPNGVTF---INILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
            + +M + G  P+ V+F   IN  +A   F     G  +HA + +Y   +      +L+S
Sbjct: 122 LFYEMLKQGIQPHSVSFTAAINACSAGPEFL--PAGRALHALLRRYGFQDAVVATTSLVS 179

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            Y KCG +++  + F  M+E  + VSWN+MI+ +  +    +A+  +  M          
Sbjct: 180 MYSKCGSLEESMRTFESMTE-PNAVSWNAMIAAFAEHRRGLEALRTLQKMF--------- 229

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
                         LE        G+RAC   DVV+G+ LV+MY+KC  +  A+  F  +
Sbjct: 230 --------------LE--------GIRAC--SDVVVGTTLVNMYAKCSGLHDANAAFVKL 265

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
              N+ +WN +IS Y +H    +A+ LF +M L G   D VTF+ +L AC     +++G 
Sbjct: 266 QEPNIITWNVLISAYVQHCCFKEAMELFRRMLLLGLEMDEVTFINILGACCVPVALEDG- 324

Query: 683 KHFKSMSQVYGLIPQLEQF-SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           +   +  + + L        + ++++ G+ G L   E     M   P+ + W T++ A
Sbjct: 325 RAIHACVREHPLASNHAPLENVILNMYGKCGSLQDAEAMFKSMS-QPDVIAWNTMIAA 381



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 107/492 (21%), Positives = 223/492 (45%), Gaps = 41/492 (8%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H  + + G   DV++ N L+ +Y + G L  A  +F+  P +N  SW  +++   
Sbjct: 52  EGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCA 111

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G S EA  +F EM++ G   +  +  + + AC   GP     G  +H L+ +      
Sbjct: 112 QHGRSQEALALFYEMLKQGIQPHSVSFTAAINACS-AGPEFLPAGRALHALLRRYGFQDA 170

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            + +  L++MY  C  S + + R FE +   + +SWN++I+ +++    +   +   +M 
Sbjct: 171 VVATTSLVSMYSKC-GSLEESMRTFESMTEPNAVSWNAMIAAFAEHRRGLEALRTLQKMF 229

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            EG R     ++   G+ +   Y+   SG +        +++  +++     + L+S + 
Sbjct: 230 LEGIRAC---SDVVVGTTLVNMYAKC-SGLHDANAAFVKLQEPNIIT----WNVLISAYV 281

Query: 243 RLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRRKGKEVHGYLIRSGLF-DMV 291
           +   F  A ++F +M+            N++    +      G+ +H  +    L  +  
Sbjct: 282 QHCCFKEAMELFRRMLLLGLEMDEVTFINILGACCVPVALEDGRAIHACVREHPLASNHA 341

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
            + N ++NMY KCG++ D+ ++F+ M   D ++WNTMI+   Q+G   EA+  +  M+ +
Sbjct: 342 PLENVILNMYGKCGSLQDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFYELMQEE 401

Query: 352 GLMSSNFSLISTL-SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA----LLSLYADAG 406
           G++  +++ +S + +SCA+ G   L ++ H   + +  D  V         ++     AG
Sbjct: 402 GVVPDDYTYVSVIDASCANAG---LPEEAHAYFVSMQQDHGVRPGGGHYGCMVESLGKAG 458

Query: 407 YLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
            LS    +   MP E D ++W S +              + + DM+R   +  G   I+ 
Sbjct: 459 RLSDAETLIQCMPFEPDVLTWTSFLA-----------NCRSHGDMKRGKLAAKGAIRIDP 507

Query: 466 LAAASSFSMGKL 477
            A+    ++ ++
Sbjct: 508 EASTGYVALARI 519



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 107/247 (43%), Gaps = 4/247 (1%)

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRI 612
           +Q+ +  D      V+ +CA +  L  G  +H    R  L  DV + + LV MY KCG +
Sbjct: 26  LQKRKDADLKECVRVIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSL 85

Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
           + A   F+  P +NV+SW  +I+  A+HG   +AL LF +M   G  P  V+F   ++AC
Sbjct: 86  EEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINAC 145

Query: 673 SHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI 732
           S         +   ++ + YG    +   + +V +  + G L++       M   PN++ 
Sbjct: 146 SAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESM-TEPNAVS 204

Query: 733 WRTVLGACCRANCRKTELGRKAANMLFE--MEPQNAVNYVLLANMYASGGKWEDVAKARK 790
           W  ++ A      R  E  R    M  E      + V    L NMYA      D   A  
Sbjct: 205 WNAMIAAFAEHR-RGLEALRTLQKMFLEGIRACSDVVVGTTLVNMYAKCSGLHDANAAFV 263

Query: 791 AMKEAEV 797
            ++E  +
Sbjct: 264 KLQEPNI 270


>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 231/619 (37%), Positives = 337/619 (54%), Gaps = 15/619 (2%)

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
           S  WNT +  L +   + +A+  +  M R G   + F+    L SCA+L   +LG Q HG
Sbjct: 14  STPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHG 73

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF--FLMPEHDQVSWNSVIGAFADSEAL 439
           +  K+G   +  V   L+S+Y     +    KVF          V +N+++  +  S + 
Sbjct: 74  QITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYV-SNSK 132

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
            SEAV  +  M   G   N VT + ++ A  S    +LG  +H   +KY   ++ ++ N 
Sbjct: 133 CSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNC 192

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
            ++ Y KCG ++  +K+F  M   +  +SWN+M+SGY  N L    + L   M   G   
Sbjct: 193 FITMYMKCGSVNYAQKLFDEMP-VKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHP 251

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           D  T   VLS+CA++     G EV      +    +  + +AL++MY++CG +  A   F
Sbjct: 252 DPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVF 311

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           D MP R + SW ++I GY  HGHG+ A+ LF +M   G  PD   FV VLSACSHAGL D
Sbjct: 312 DGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTD 371

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           +G ++FK M + Y L P  E +SCMVDLLGRAG L + +  I  MPI P+  +W  +LGA
Sbjct: 372 QGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGA 431

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKK 799
           C     +  EL   A   + E+EP+N   YVLL+N+Y++    + V + R  MKE ++KK
Sbjct: 432 C--KIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKK 489

Query: 800 EAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES 859
           + GCS+V +K  VH F+ GD +H + D IY  L+EL   +      P+      D   ES
Sbjct: 490 DPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEK-----DNREES 544

Query: 860 KED---LVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLR 915
            +D    V  HSEK+AVAF +L   +   + I+KNLR+C DCH  FK +SKIV R++ +R
Sbjct: 545 NKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVR 604

Query: 916 DSNRFHHFNDGKCSCGDYW 934
           D+ RFHHF +G CSC DYW
Sbjct: 605 DATRFHHFRNGSCSCKDYW 623



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 189/422 (44%), Gaps = 53/422 (12%)

Query: 157 SWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ 216
            WN+ +   ++R   +    L+ +M R G R    PN +TF   + +   + LS   L  
Sbjct: 16  PWNTQLRELAKRCQFLQALSLYPQMLRHGDR----PNAFTFPFALKSC--AALSLPILGS 69

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI--QKNVVSMNGLMEGR-- 272
           Q    + K G + + +V + L+S + +      ARK+FE+    +K  V  N L+ G   
Sbjct: 70  QFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVS 129

Query: 273 ---------------------------------------RKGKEVHGYLIRSGLFDMVAV 293
                                                    G  +H   ++ G    V+V
Sbjct: 130 NSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSV 189

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
            N  + MY KCG+++ ++ +F  M  K  +SWN M+SG  QNG     +  +  M  +G+
Sbjct: 190 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 249

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
                +L+  LSSCA+LG   +G ++  +    G  S+  ++NAL+++YA  G L++   
Sbjct: 250 HPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQA 309

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           VF  MPE   VSW ++IG +         AV+ + +M R+G  P+G  F+ +L+A S   
Sbjct: 310 VFDGMPERTLVSWTAIIGGYG-MHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAG 368

Query: 474 MGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
           +   G + + +++K N   E   E+   ++   G+ G + + + +   M  + D   W +
Sbjct: 369 LTDQGLE-YFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGA 427

Query: 532 MI 533
           ++
Sbjct: 428 LL 429



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 159/324 (49%), Gaps = 27/324 (8%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDE--MPDRNSVSWACIVSGYTHK 64
           FH QI K G  ++ F+   LI++Y +   + +A K+F+E     + +V +  +VSGY   
Sbjct: 71  FHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSN 130

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
              +EA  +F++M   G  +N   L  ++ AC    P   + G  +HC  LK     D  
Sbjct: 131 SKCSEAVLLFRQMNEEGVPVNSVTLLGLIPAC--VSPINLELGSSLHCSTLKYGFDSDVS 188

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V N  I MY  C  S + A+++F+E+  + LISWN+++S Y+Q G   +V +L+  M   
Sbjct: 189 VVNCFITMYMKC-GSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMN 247

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G    + P+  T   ++++  +  L    +  ++   ++ +G  S+ ++ +AL++ +AR 
Sbjct: 248 G----VHPDPVTLVGVLSSCAN--LGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARC 301

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHG--------YLIRSGLFDMVAVGNG 296
           GN   A+ +F+ M ++ +VS   ++ G   G   HG         +IRSG+      G  
Sbjct: 302 GNLTKAQAVFDGMPERTLVSWTAIIGGY--GMHGHGEIAVQLFKEMIRSGI---EPDGTA 356

Query: 297 LVNMYAKC---GTIDDSRSVFRFM 317
            V + + C   G  D     F+ M
Sbjct: 357 FVCVLSACSHAGLTDQGLEYFKMM 380



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 120/257 (46%), Gaps = 14/257 (5%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   LK+GF  DV + N  I +Y++ G +  A KLFDEMP +  +SW  +VSGY   G+
Sbjct: 174 LHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGL 233

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           +    ++++ M   G   +   L  VL +C   G      G +V   +  S  T +  ++
Sbjct: 234 ATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQ--SVGHEVEFKIQASGFTSNPFLN 291

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI MY  C   T  A+ +F+ +  R L+SW +II  Y   G      +LF  M R G 
Sbjct: 292 NALINMYARCGNLTK-AQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSG- 349

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL---SDLYVGSALVSGFAR 243
              ++P+   F  +++A   + L+   L  +   M+K+   L    + Y  S +V    R
Sbjct: 350 ---IEPDGTAFVCVLSACSHAGLTDQGL--EYFKMMKRNYQLEPGPEHY--SCMVDLLGR 402

Query: 244 LGNFYYARKIFEQMIQK 260
            G    A+ + E M  K
Sbjct: 403 AGRLKEAQTLIESMPIK 419



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 168/410 (40%), Gaps = 56/410 (13%)

Query: 69  EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV 128
           +A  ++ +M+R G   N +     L++C     S    G Q H  + K    F+  V   
Sbjct: 32  QALSLYPQMLRHGDRPNAFTFPFALKSCAAL--SLPILGSQFHGQITKVGCVFEPFVQTG 89

Query: 129 LIAMYGSCLES-TDCARRIFEE-IETRDL-ISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           LI+MY  C  S  D AR++FEE   +R L + +N+++S Y           LF +M  EG
Sbjct: 90  LISMY--CKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEG 147

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
               +  N  T   LI A  S +     L   +     K G  SD+ V +  ++ + + G
Sbjct: 148 ----VPVNSVTLLGLIPACVSPI--NLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCG 201

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------- 274
           +  YA+K+F++M  K ++S N ++ G  +                               
Sbjct: 202 SVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLS 261

Query: 275 ----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                     G EV   +  SG      + N L+NMYA+CG +  +++VF  M  +  VS
Sbjct: 262 SCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVS 321

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEG 383
           W  +I G   +G  E A+  F  M R G+     + +  LS+C+  G    G +      
Sbjct: 322 WTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMK 381

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
               L+      + ++ L   AG L     +   MP + D   W +++GA
Sbjct: 382 RNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGA 431


>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 646

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/540 (38%), Positives = 320/540 (59%), Gaps = 5/540 (0%)

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           N L   Y   G L    K+F  MPE +  +WN+++    +      E++ ++LDMRR G 
Sbjct: 111 NILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNL-GFDEESLGFFLDMRREGM 169

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            P+     ++    +       G QVHA V++  +  +  + ++L   Y +CG + + E 
Sbjct: 170 HPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEA 229

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +  RM      VS N++I+G   N     A+     M   G   D  TF + +S+C+ +A
Sbjct: 230 VL-RMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLA 288

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            L +G ++H   ++A ++  V + + LV MYS+CG +  + R F      + +  ++MIS
Sbjct: 289 ALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMIS 348

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
            Y  HGHG KA+ LF QM   G  P  VTF+ +L ACSH+GL +EG   F+ M++ YG+ 
Sbjct: 349 AYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQ 408

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           P ++ ++C+VDLLGR+G LD+ E  I  MP+TP+ +IW+T+L AC     +  ++  + A
Sbjct: 409 PSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSAC--KTQKNFDMAERIA 466

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
             + E++P ++ +YVLL+N+ A+  +W DV++ RKAM++  V+KE G SWV +K  +H F
Sbjct: 467 KRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQF 526

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
             GDESHP +  I E L+E+  K+R  GY P     L D+E E KE  +S+HSEK+A+AF
Sbjct: 527 CTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAF 586

Query: 876 V-LTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             L+    +PIR+MKNLRVC DCH A K +S++ GREIV+RD +RFHHF DG+CSC DYW
Sbjct: 587 AFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 646



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 198/427 (46%), Gaps = 39/427 (9%)

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK 274
           L+Q+ A    +G  +D +  + L+  +A LG+   AR++FE++ ++NV+S N L  G   
Sbjct: 60  LRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGG--- 116

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
                                     Y K G +  +R +F  M  ++  +WN M++GL  
Sbjct: 117 --------------------------YIKNGDLGGARKLFDEMPERNVATWNAMVAGLTN 150

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G  EE++  F  MRR+G+    F L S    CA L  ++ G+Q+H   ++ GLD D+ V
Sbjct: 151 LGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCV 210

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF---ADSEALVSEAVKYYLDMR 451
            ++L  +Y   G L     V  ++P    VS N++I       DSE     A++Y+  MR
Sbjct: 211 GSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEG----ALEYFCMMR 266

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             G + + VTF++ +++ S  +    G Q+H QV+K  V     +   L+  Y +CG + 
Sbjct: 267 SVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLG 326

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
           D E++F       D    ++MIS Y  +    KA+ L   MM  G      TF  +L AC
Sbjct: 327 DSERVFFGYCG-SDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYAC 385

Query: 572 ASVATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYS 629
           +     E GM+      +   ++  V   + +VD+  + G +D A      MP+  +   
Sbjct: 386 SHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVI 445

Query: 630 WNSMISG 636
           W +++S 
Sbjct: 446 WKTLLSA 452



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 172/390 (44%), Gaps = 29/390 (7%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N L   Y++ GDL  A KLFDEMP+RN  +W  +V+G T+ G   E+   F +M R G  
Sbjct: 111 NILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMH 170

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY--GSCLESTD 141
            + + LGSV R C   G      G QVH  V++S    D  V + L  MY    CL+  +
Sbjct: 171 PDEFGLGSVFRCCA--GLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGE 228

Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
              R+   +    ++S N+II+  +Q GD+    + F  M+  G    +  +  TF S I
Sbjct: 229 AVLRMLPSLS---IVSCNTIIAGRTQNGDSEGALEYFCMMRSVG----VAADVVTFVSAI 281

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF------E 255
           ++   S L+     QQI   V KAG+   + V + LV  ++R G    + ++F      +
Sbjct: 282 SSC--SDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSD 339

Query: 256 QMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
             +   ++S  G     +K  E+   ++  G          L+   +  G  ++    F 
Sbjct: 340 TFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFE 399

Query: 316 FMIG----KDSVS-WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
            M      + SV  +  ++  L ++GC +EA     +M    L        + LS+C + 
Sbjct: 400 LMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSM---PLTPDGVIWKTLLSACKTQ 456

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
               + ++I    ++  LD   S S  LLS
Sbjct: 457 KNFDMAERIAKRVIE--LDPHDSASYVLLS 484



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 99/413 (23%), Positives = 162/413 (39%), Gaps = 82/413 (19%)

Query: 92  VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE 151
           + RAC+   P       Q+H     S    D   +N L+  Y   L     AR +FE I 
Sbjct: 50  LFRACRALRPL-----RQLHAFAATSGAATDRFTANHLMLAYAD-LGDLTAARELFERIP 103

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQRE---------------GF---------- 186
            R+++SWN +   Y + GD     KLF  M                  GF          
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 163

Query: 187 --RYSLKPNEYTFGSLI--TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             R  + P+E+  GS+    A    V++G    +Q+ A V ++GL  D+ VGS+L   + 
Sbjct: 164 MRREGMHPDEFGLGSVFRCCAGLRDVVTG----RQVHAYVVRSGLDRDMCVGSSLAHMYM 219

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRR----------------------------- 273
           R G       +   +   ++VS N ++ GR                              
Sbjct: 220 RCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVS 279

Query: 274 ------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                       +G+++HG ++++G+  +V V   LV+MY++CG + DS  VF    G D
Sbjct: 280 AISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSD 339

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
           +   + MIS    +G  ++AI  F  M   G   S+ + ++ L +C+  G    G     
Sbjct: 340 TFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFE 399

Query: 382 EGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
              K  G+   V     ++ L   +G L     +   MP   D V W +++ A
Sbjct: 400 LMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 452



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 8/130 (6%)

Query: 551 FMMQRGQRLDHFTFATVLSACASVATLERGMEV-HACGVRACLEFDVVIGSALVDMYSKC 609
           F    G   D FT   ++ A A +  L    E+      R  + ++++ G      Y K 
Sbjct: 66  FAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGG-----YIKN 120

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
           G +  A + FD MP RNV +WN+M++G    G  +++L  F  M+ +G  PD      V 
Sbjct: 121 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 180

Query: 670 SACSHAGLVD 679
             C  AGL D
Sbjct: 181 RCC--AGLRD 188



 Score = 47.0 bits (110), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 7/127 (5%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           F+ +  AC ++  L    ++HA    +    D    + L+  Y+  G +  A   F+ +P
Sbjct: 47  FSHLFRACRALRPLR---QLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 103

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            RNV SWN +  GY ++G    A  LF +M    P  +  T+  +++  ++ G  +E   
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEM----PERNVATWNAMVAGLTNLGFDEESLG 159

Query: 684 HFKSMSQ 690
            F  M +
Sbjct: 160 FFLDMRR 166


>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/615 (37%), Positives = 342/615 (55%), Gaps = 45/615 (7%)

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA--DAGYLSRCLKVF 415
           + L+S L  C     I   +Q+H   ++ GL     V   L+ +    D    S  L VF
Sbjct: 43  WRLMSILHDCTLFSQI---KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVF 99

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
             +   +   W ++I  +A  + L+SE+  +Y  MRR G  P   TF  +  A  +    
Sbjct: 100 GQVNYPNPFLWTAMIRGYA-LQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNM 158

Query: 476 KLGHQVHAQVIKY-NVANETTIENALLSCYGKCGEMDDCEKIFARMSER----------- 523
            LG QVHAQ I     A++  + N+++  Y KCG +    K+F  MSER           
Sbjct: 159 DLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVA 218

Query: 524 -------------------RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
                              +D V+W +M++GY  N    +A+     M   G   D  T 
Sbjct: 219 YAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTL 278

Query: 565 ATVLSACASVATLERGMEVHACGVRACL--EFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           A V+SACA +  ++    +     R+      +VV+GSAL+DMYSKCG  D A + F++M
Sbjct: 279 AGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVM 338

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
             RNV+S++SMI GYA HG    AL LF  M      P+ VTF+G+LSACSHAGLV++G 
Sbjct: 339 KERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGR 398

Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-C 741
           + F  M + +G+ P  + ++CMVDLLGRAG L++  + +  MP+ PN  +W  +LGAC  
Sbjct: 399 QLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRI 458

Query: 742 RANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA 801
             N    ++ + AAN LF++EP    NY+LL+N+YAS G+WE+V+K RK ++E   KK  
Sbjct: 459 HGN---PDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNP 515

Query: 802 GCSWVTMKDG-VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESK 860
           GCSW   K+G +H F AGD +HP    I + LK+L +++R  GY P    A +DL  + K
Sbjct: 516 GCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEK 575

Query: 861 EDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNR 919
           E ++  HSEK+A+A+ +L   +   I+IMKN+R+C DCH+     S+I GREI++RD+ R
Sbjct: 576 ERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMR 635

Query: 920 FHHFNDGKCSCGDYW 934
           FHHF++G CSCG++W
Sbjct: 636 FHHFHNGTCSCGNFW 650



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 188/420 (44%), Gaps = 62/420 (14%)

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF--MIGKDSVSWNTMISGLD 333
           K+VH ++IR+GL     V   L+ M  K      S  +  F  +   +   W  MI G  
Sbjct: 59  KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYA 118

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG-LDSDV 392
             G   E+   +  MRRDG+   +F+  +   +C +   + LG+Q+H + + +G   SD+
Sbjct: 119 LQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDL 178

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA---DSE------------ 437
            V N+++ LY   G+L    KVF  M E D VSW  +I A+A   D E            
Sbjct: 179 YVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLK 238

Query: 438 ------ALVS---------EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
                 A+V+         EA++Y+  M+  G   + VT   +++A +     +LG   H
Sbjct: 239 DMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACA-----QLGAVKH 293

Query: 483 AQVIK-------YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           A  I+       +  +    + +AL+  Y KCG  D+  K+F  M E R+  S++SMI G
Sbjct: 294 ANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKE-RNVFSYSSMILG 352

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
           Y  +     A+ L   M++   R +  TF  +LSAC+    +E+G ++ A       + +
Sbjct: 353 YAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFA-------KME 405

Query: 596 VVIGSA--------LVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKA 646
              G A        +VD+  + G ++ A      MP+  N   W +++     HG+ D A
Sbjct: 406 KFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIA 465



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 106/446 (23%), Positives = 191/446 (42%), Gaps = 67/446 (15%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASK---LFDEMPDRNSVSWACIVSGY 61
           K  H  I+++G +   ++   LI +  +V D+   S    +F ++   N   W  ++ GY
Sbjct: 59  KQVHAHIIRNGLSQCSYVLTKLIRMLTKV-DVPMGSYPLLVFGQVNYPNPFLWTAMIRGY 117

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHC-LVLKSNQT 120
             +G+ +E+   +  M R G     +   ++ +AC          G QVH   +L     
Sbjct: 118 ALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACG--AALNMDLGKQVHAQTILIGGFA 175

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D  V N +I +Y  C     CAR++F+E+  RD++SW  +I  Y++ GD  S   LF  
Sbjct: 176 SDLYVGNSMIDLYVKC-GFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDD 234

Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           +                                              L D+   +A+V+G
Sbjct: 235 LP---------------------------------------------LKDMVAWTAMVTG 249

Query: 241 FARLGNFYYARKIFEQM----IQKNVVSMNGLMEG-RRKGKEVHGYLIRS-------GLF 288
           +A+ G    A + F++M    ++ + V++ G++    + G   H   IR        G  
Sbjct: 250 YAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPS 309

Query: 289 DMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
             V VG+ L++MY+KCG+ D++  VF  M  ++  S+++MI G   +G    A+  F  M
Sbjct: 310 GNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDM 369

Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSLYADAGY 407
            +  +  +  + I  LS+C+  G +  G+Q+  +  K  G+         ++ L   AG 
Sbjct: 370 LKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGC 429

Query: 408 LSRCLKVFFLMP-EHDQVSWNSVIGA 432
           L   L +   MP E +   W +++GA
Sbjct: 430 LEEALDLVKTMPMEPNGGVWGALLGA 455



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 54/258 (20%), Positives = 112/258 (43%), Gaps = 14/258 (5%)

Query: 547 NLVWF-MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
           N + F  +Q  ++L  +   ++L  C   + ++   +VHA  +R  L     + + L+ M
Sbjct: 27  NFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIK---QVHAHIIRNGLSQCSYVLTKLIRM 83

Query: 606 YSKCGRI--DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
            +K       Y    F  +   N + W +MI GYA  G   ++   +++M+ DG  P   
Sbjct: 84  LTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSF 143

Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
           TF  +  AC  A  +D G +       + G    L   + M+DL  + G L    +  ++
Sbjct: 144 TFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDE 203

Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP-QNAVNYVLLANMYASGGKW 782
           M    + + W  ++ A  +          ++A+ LF+  P ++ V +  +   YA  G+ 
Sbjct: 204 MS-ERDVVSWTELIVAYAKYG------DMESASGLFDDLPLKDMVAWTAMVTGYAQNGRP 256

Query: 783 EDVAKARKAMKEAEVKKE 800
           ++  +  + M++  ++ +
Sbjct: 257 KEALEYFQKMQDVGMETD 274


>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g40410, mitochondrial; Flags: Precursor
 gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
 gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 608

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 237/628 (37%), Positives = 359/628 (57%), Gaps = 34/628 (5%)

Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
           S FRF+  +  +S ++ +  LD N                       SLI+ + SC S  
Sbjct: 10  SKFRFLYRRRFLSQSSFVHSLDANVS---------------------SLIAAVKSCVS-- 46

Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
            I L + +H + +K        + + L+  Y   G+     K+F  MPE D VSWNS+I 
Sbjct: 47  -IELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLIS 105

Query: 432 AFADSEAL-VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
            ++    L     V   + +   G+ PN VTF+++++A       + G  +H  V+K+ V
Sbjct: 106 GYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGV 165

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
             E  + NA ++ YGK G++    K+F  +S  ++ VSWN+MI  ++ N L  K   L +
Sbjct: 166 LEEVKVVNAFINWYGKTGDLTSSCKLFEDLS-IKNLVSWNTMIVIHLQNGLAEKG--LAY 222

Query: 551 FMMQR--GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
           F M R  G   D  TF  VL +C  +  +     +H   +      +  I +AL+D+YSK
Sbjct: 223 FNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSK 282

Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
            GR++ +S  F  +   +  +W +M++ YA HG G  A+  F  M   G  PDHVTF  +
Sbjct: 283 LGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHL 342

Query: 669 LSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITP 728
           L+ACSH+GLV+EG  +F++MS+ Y + P+L+ +SCMVDLLGR+G L      I +MP+ P
Sbjct: 343 LNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEP 402

Query: 729 NSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKA 788
           +S +W  +LGAC     + T+LG KAA  LFE+EP++  NYV+L+N+Y++ G W+D ++ 
Sbjct: 403 SSGVWGALLGAC--RVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRI 460

Query: 789 RKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR-DAGYVPQ 847
           R  MK+  + + +GCS++   + +H FV GD SHPE + I +KLKE+ +KM+ + GY  +
Sbjct: 461 RNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSK 520

Query: 848 TKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKL-PIRIMKNLRVCGDCHSAFKFISK 906
           T+F L D+  + KE++++ HSEKIA+AF L   S + PI I KNLR+CGDCH   K IS 
Sbjct: 521 TEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISL 580

Query: 907 IVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           I  R I++RDS RFHHF DG CSC DYW
Sbjct: 581 IEKRRIIIRDSKRFHHFLDGSCSCSDYW 608



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 111/450 (24%), Positives = 193/450 (42%), Gaps = 57/450 (12%)

Query: 171 TISVFKLFSR---MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
           + S F+   R   + +  F +SL  N     SLI A  S V     L + +   V K+  
Sbjct: 8   SCSKFRFLYRRRFLSQSSFVHSLDAN---VSSLIAAVKSCV--SIELCRLLHCKVVKSVS 62

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------------- 271
               ++G  LV  + RLG+   A K+F++M ++++VS N L+ G                
Sbjct: 63  YRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSR 122

Query: 272 ---------------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
                                      + +G+ +HG +++ G+ + V V N  +N Y K 
Sbjct: 123 MMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKT 182

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G +  S  +F  +  K+ VSWNTMI    QNG  E+ +  F   RR G      + ++ L
Sbjct: 183 GDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVL 242

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            SC  +G + L Q IHG  +  G   +  ++ ALL LY+  G L     VF  +   D +
Sbjct: 243 RSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSM 302

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHA 483
           +W +++ A+A +     +A+K++  M   G SP+ VTF ++L A S   + + G H    
Sbjct: 303 AWTAMLAAYA-THGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFET 361

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG---YIHNE 540
              +Y +       + ++   G+ G + D   +   M        W +++     Y   +
Sbjct: 362 MSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQ 421

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
           L  KA   ++ +  R  R ++   + + SA
Sbjct: 422 LGTKAAERLFELEPRDGR-NYVMLSNIYSA 450



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/354 (22%), Positives = 163/354 (46%), Gaps = 30/354 (8%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +L H +++K       F+ + L+  Y+R+G    A KLFDEMP+R+ VSW  ++SGY+ +
Sbjct: 51  RLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGR 110

Query: 65  GMSNEACKMFKEMV--RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
           G   +  ++   M+    GF  N     S++ AC   G    + G  +H LV+K     +
Sbjct: 111 GYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSK--EEGRCIHGLVMKFGVLEE 168

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V N  I  YG   + T    ++FE++  ++L+SWN++I ++ Q G        F+  +
Sbjct: 169 VKVVNAFINWYGKTGDLTSSC-KLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSR 227

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           R G     +P++ TF +++ +     +    L Q I  ++   G   +  + +AL+  ++
Sbjct: 228 RVGH----EPDQATFLAVLRSCED--MGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYS 281

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY----------LIRSGLFDMVA 292
           +LG    +  +F ++   + ++   ++         HG+          ++  G+     
Sbjct: 282 KLGRLEDSSTVFHEITSPDSMAWTAML----AAYATHGFGRDAIKHFELMVHYGISPDHV 337

Query: 293 VGNGLVNMYAKCGTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEA 341
               L+N  +  G +++ +  F     R+ I      ++ M+  L ++G  ++A
Sbjct: 338 TFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 115/249 (46%), Gaps = 25/249 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H  ++K G   +V + N  IN Y + GDL S+ KLF+++  +N VSW  ++  +
Sbjct: 151 EEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIH 210

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G++ +    F    R G   ++    +VLR+C++ G    +    +H L++    + 
Sbjct: 211 LQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGV--VRLAQGIHGLIMFGGFSG 268

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  ++  L+ +Y S L   + +  +F EI + D ++W ++++ Y+  G      K F  M
Sbjct: 269 NKCITTALLDLY-SKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELM 327

Query: 182 QREGFRYSLKPNEYTFGSLITAA-----------YSSVLSGSYLLQQ-------ILAMVK 223
                 Y + P+  TF  L+ A            Y   +S  Y +         ++ ++ 
Sbjct: 328 ----VHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLG 383

Query: 224 KAGLLSDLY 232
           ++GLL D Y
Sbjct: 384 RSGLLQDAY 392


>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
 gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 697

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/681 (33%), Positives = 375/681 (55%), Gaps = 70/681 (10%)

Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
           F  L+ +   S LS  Y+ + + A V K+G  +++++ + L+  +++ G+    R++F++
Sbjct: 22  FAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDK 80

Query: 257 MIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
           M Q+N+ + N ++ G                               K G +D++ S+FR 
Sbjct: 81  MPQRNIYTWNSVVTG-----------------------------LTKLGFLDEADSLFRS 111

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M  +D  +WN+M+SG  Q+   EEA+  F  M ++G + + +S  S LS+C+ L  +  G
Sbjct: 112 MPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKG 171

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
            Q+H    K    SDV + +AL+ +Y+  G ++   +VF  M + + VSWNS+I  F  +
Sbjct: 172 VQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQN 231

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN-VANETT 495
              V EA+  +  M  +   P+ VT  ++++A +S S  K+G +VH +V+K + + N+  
Sbjct: 232 GPAV-EALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDII 290

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSER------------------------------RD 525
           + NA +  Y KC  + +   IF  M  R                              R+
Sbjct: 291 LSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERN 350

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
            VSWN++I+GY  N    +A++L   + +      H++FA +L ACA +A L  GM+ H 
Sbjct: 351 VVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHV 410

Query: 586 CGVRACLEF------DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
             ++   +F      D+ +G++L+DMY KCG ++     F  M  R+  SWN+MI G+A+
Sbjct: 411 HVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQ 470

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
           +G+G++AL LF +M   G  PDH+T +GVLSAC HAG V+EG  +F SM++ +G+ P  +
Sbjct: 471 NGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRD 530

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
            ++CMVDLLGRAG L++ +  I +MP+ P+S+IW ++L AC     R   LG+  A  L 
Sbjct: 531 HYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAAC--KVHRNITLGKYVAEKLL 588

Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           E+EP N+  YVLL+NMYA  GKWEDV   RK+M++  V K+ GCSW+ ++   HVF+  D
Sbjct: 589 EVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKD 648

Query: 820 ESHPEKDLIYEKLKELNQKMR 840
           +SHP K  I+  L  L  +MR
Sbjct: 649 KSHPRKKQIHSLLDILIAEMR 669



 Score =  239 bits (610), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 159/570 (27%), Positives = 271/570 (47%), Gaps = 78/570 (13%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H  ++K GF+ ++F+ N LI+ Y + G L    ++FD+MP RN  +W  +V+G T  
Sbjct: 40  RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99

Query: 65  GMSNEACKMFKEMV-------------------------------RAGFLLNRYALGSVL 93
           G  +EA  +F+ M                                + GF+LN Y+  SVL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159

Query: 94  RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
            AC   G +    G+QVH L+ KS    D  + + L+ MY  C    D A+R+F+E+  R
Sbjct: 160 SACS--GLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVND-AQRVFDEMGDR 216

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY 213
           +++SWNS+I+ + Q G  +    +F  M        ++P+E T  S+I+A  S  LS   
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVFQMM----LESRVEPDEVTLASVISACAS--LSAIK 270

Query: 214 LLQQILA-MVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR 272
           + Q++   +VK   L +D+ + +A V  +A+      AR IF+ M  +NV++   ++ G 
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG- 329

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
                                       YA   +   +R +F  M  ++ VSWN +I+G 
Sbjct: 330 ----------------------------YAMAASTKAARLMFTKMAERNVVSWNALIAGY 361

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL---- 388
            QNG  EEA+  FC ++R+ +  +++S  + L +CA L  + LG Q H   LK G     
Sbjct: 362 TQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQS 421

Query: 389 --DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
             + D+ V N+L+ +Y   G +     VF  M E D VSWN++I  FA +    +EA++ 
Sbjct: 422 GEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN-GYGNEALEL 480

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYG 505
           + +M  +G  P+ +T I +L+A       + G H   +    + VA        ++   G
Sbjct: 481 FREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLG 540

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           + G +++ + +   M  + D V W S+++ 
Sbjct: 541 RAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 209/458 (45%), Gaps = 66/458 (14%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  I K  F  DV++ + L+++Y + G++  A ++FDEM DRN VSW  +++ +   G +
Sbjct: 175 HSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPA 234

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF-DGLVS 126
            EA  +F+ M+ +    +   L SV+ AC     S  K G +VH  V+K+++   D ++S
Sbjct: 235 VEALDVFQMMLESRVEPDEVTLASVISACASL--SAIKVGQEVHGRVVKNDKLRNDIILS 292

Query: 127 NVLIAMYGSC------------------------------LESTDCARRIFEEIETRDLI 156
           N  + MY  C                                ST  AR +F ++  R+++
Sbjct: 293 NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVV 352

Query: 157 SWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ 216
           SWN++I+ Y+Q G+      LF  ++RE    S+ P  Y+F +++ A     L+  +L  
Sbjct: 353 SWNALIAGYTQNGENEEALSLFCLLKRE----SVCPTHYSFANILKACAD--LAELHLGM 406

Query: 217 QILAMVKKAGLL------SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
           Q    V K G         D++VG++L+  + + G       +F +M++++ VS N ++ 
Sbjct: 407 QAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMII 466

Query: 271 G------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
           G        +  E+   ++ SG         G+++     G +++ R  F  M     V+
Sbjct: 467 GFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVA 526

Query: 325 -----WNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
                +  M+  L + G  EEA  ++    M+ D ++       S L++C     I LG+
Sbjct: 527 PLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWG-----SLLAACKVHRNITLGK 581

Query: 378 QIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLKV 414
            +  E L L ++   S    LLS +YA+ G     + V
Sbjct: 582 YV-AEKL-LEVEPSNSGPYVLLSNMYAELGKWEDVMNV 617


>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
 gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
          Length = 708

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/540 (38%), Positives = 320/540 (59%), Gaps = 5/540 (0%)

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           N L   Y   G L    K+F  MPE +  +WN+++    +      E++ ++LDMRR G 
Sbjct: 173 NILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNL-GFDEESLGFFLDMRREGM 231

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            P+     ++    +       G QVHA V++  +  +  + ++L   Y +CG + + E 
Sbjct: 232 HPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEA 291

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +  RM      VS N++I+G   N     A+     M   G   D  TF + +S+C+ +A
Sbjct: 292 VL-RMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLA 350

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            L +G ++H   ++A ++  V + + LV MYS+CG +  + R F      + +  ++MIS
Sbjct: 351 ALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMIS 410

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
            Y  HGHG KA+ LF QM   G  P  VTF+ +L ACSH+GL +EG   F+ M++ YG+ 
Sbjct: 411 AYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQ 470

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           P ++ ++C+VDLLGR+G LD+ E  I  MP+TP+ +IW+T+L AC     +  ++  + A
Sbjct: 471 PSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSAC--KTQKNFDMAERIA 528

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
             + E++P ++ +YVLL+N+ A+  +W DV++ RKAM++  V+KE G SWV +K  +H F
Sbjct: 529 KRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQF 588

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
             GDESHP +  I E L+E+  K+R  GY P     L D+E E KE  +S+HSEK+A+AF
Sbjct: 589 CTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAF 648

Query: 876 V-LTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             L+    +PIR+MKNLRVC DCH A K +S++ GREIV+RD +RFHHF DG+CSC DYW
Sbjct: 649 AFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 708



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 221/491 (45%), Gaps = 44/491 (8%)

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRM-----QREGFRYSLKPNEYTFGSLITAAYSSVLS 210
           +S  S++ + +   DT++    F R+      R+  R   +   ++  + + +       
Sbjct: 58  LSLRSMVGLVALSLDTVATKDEFVRLCATGRLRDALRRPFRGVLWSDAARLFSHLFRACR 117

Query: 211 GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
               L+Q+ A    +G  +D +  + L+  +A LG+   AR++FE++ ++NV+S N L  
Sbjct: 118 ALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFG 177

Query: 271 GRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
           G                             Y K G +  +R +F  M  ++  +WN M++
Sbjct: 178 G-----------------------------YIKNGDLGGARKLFDEMPERNVATWNAMVA 208

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
           GL   G  EE++  F  MRR+G+    F L S    CA L  ++ G+Q+H   ++ GLD 
Sbjct: 209 GLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDR 268

Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF---ADSEALVSEAVKYY 447
           D+ V ++L  +Y   G L     V  ++P    VS N++I       DSE     A++Y+
Sbjct: 269 DMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEG----ALEYF 324

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
             MR  G + + VTF++ +++ S  +    G Q+H QV+K  V     +   L+  Y +C
Sbjct: 325 CMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRC 384

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
           G + D E++F       D    ++MIS Y  +    KA+ L   MM  G      TF  +
Sbjct: 385 GCLGDSERVFFGYCG-SDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLAL 443

Query: 568 LSACASVATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR- 625
           L AC+     E GM+      +   ++  V   + +VD+  + G +D A      MP+  
Sbjct: 444 LYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTP 503

Query: 626 NVYSWNSMISG 636
           +   W +++S 
Sbjct: 504 DGVIWKTLLSA 514



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 172/390 (44%), Gaps = 29/390 (7%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N L   Y++ GDL  A KLFDEMP+RN  +W  +V+G T+ G   E+   F +M R G  
Sbjct: 173 NILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMH 232

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY--GSCLESTD 141
            + + LGSV R C   G      G QVH  V++S    D  V + L  MY    CL+  +
Sbjct: 233 PDEFGLGSVFRCCA--GLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGE 290

Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
              R+   +    ++S N+II+  +Q GD+    + F  M+  G    +  +  TF S I
Sbjct: 291 AVLRMLPSLS---IVSCNTIIAGRTQNGDSEGALEYFCMMRSVG----VAADVVTFVSAI 343

Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF------E 255
           ++   S L+     QQI   V KAG+   + V + LV  ++R G    + ++F      +
Sbjct: 344 SSC--SDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSD 401

Query: 256 QMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
             +   ++S  G     +K  E+   ++  G          L+   +  G  ++    F 
Sbjct: 402 TFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFE 461

Query: 316 FMIG----KDSVS-WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
            M      + SV  +  ++  L ++GC +EA     +M    L        + LS+C + 
Sbjct: 462 LMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSM---PLTPDGVIWKTLLSACKTQ 518

Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
               + ++I    ++  LD   S S  LLS
Sbjct: 519 KNFDMAERIAKRVIE--LDPHDSASYVLLS 546



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 99/413 (23%), Positives = 162/413 (39%), Gaps = 82/413 (19%)

Query: 92  VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE 151
           + RAC+   P       Q+H     S    D   +N L+  Y   L     AR +FE I 
Sbjct: 112 LFRACRALRPL-----RQLHAFAATSGAATDRFTANHLMLAYAD-LGDLTAARELFERIP 165

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQRE---------------GF---------- 186
            R+++SWN +   Y + GD     KLF  M                  GF          
Sbjct: 166 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 225

Query: 187 --RYSLKPNEYTFGSLI--TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             R  + P+E+  GS+    A    V++G    +Q+ A V ++GL  D+ VGS+L   + 
Sbjct: 226 MRREGMHPDEFGLGSVFRCCAGLRDVVTG----RQVHAYVVRSGLDRDMCVGSSLAHMYM 281

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRR----------------------------- 273
           R G       +   +   ++VS N ++ GR                              
Sbjct: 282 RCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVS 341

Query: 274 ------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
                       +G+++HG ++++G+  +V V   LV+MY++CG + DS  VF    G D
Sbjct: 342 AISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSD 401

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
           +   + MIS    +G  ++AI  F  M   G   S+ + ++ L +C+  G    G     
Sbjct: 402 TFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFE 461

Query: 382 EGLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
              K  G+   V     ++ L   +G L     +   MP   D V W +++ A
Sbjct: 462 LMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 514



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 8/130 (6%)

Query: 551 FMMQRGQRLDHFTFATVLSACASVATLERGMEV-HACGVRACLEFDVVIGSALVDMYSKC 609
           F    G   D FT   ++ A A +  L    E+      R  + ++++ G      Y K 
Sbjct: 128 FAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGG-----YIKN 182

Query: 610 GRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
           G +  A + FD MP RNV +WN+M++G    G  +++L  F  M+ +G  PD      V 
Sbjct: 183 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 242

Query: 670 SACSHAGLVD 679
             C  AGL D
Sbjct: 243 RCC--AGLRD 250



 Score = 46.6 bits (109), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 7/127 (5%)

Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
           F+ +  AC ++  L    ++HA    +    D    + L+  Y+  G +  A   F+ +P
Sbjct: 109 FSHLFRACRALRPLR---QLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 165

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            RNV SWN +  GY ++G    A  LF +M    P  +  T+  +++  ++ G  +E   
Sbjct: 166 RRNVMSWNILFGGYIKNGDLGGARKLFDEM----PERNVATWNAMVAGLTNLGFDEESLG 221

Query: 684 HFKSMSQ 690
            F  M +
Sbjct: 222 FFLDMRR 228


>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 218/608 (35%), Positives = 344/608 (56%), Gaps = 36/608 (5%)

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           L+  L +CA      +G+++H   +K G+D   S+SN L+++Y   G +   L +F  +P
Sbjct: 6   LVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLP 65

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             D +SW S++ A   +         +    ++ G  P+   F  ++ A +     K G 
Sbjct: 66  HRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGK 125

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN 539
           QVHA  I   V+++  ++++L+  Y KCG  D    +F  +S + + +SW +MISGY  +
Sbjct: 126 QVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSK-NSISWTAMISGYAQS 184

Query: 540 ----------ELLPKAMNLVW-------------------FMMQRGQRLD---HFTFATV 567
                     + +P    L W                   FM  R + +D    F  +++
Sbjct: 185 GRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSI 244

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           + A A++A L  G ++H   +    E  + + +ALVDMY+KC  +  A + F  M  R++
Sbjct: 245 IGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDI 304

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            SW S+I G A+HG  ++AL+L+++M   G  P+ VTFVG++ ACSH GLV +G   F S
Sbjct: 305 VSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNS 364

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           M + YG+ P L+ ++C++DLL R+G L++ E  I  MP  P+   W  +L AC   + R 
Sbjct: 365 MIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSAC--NHHRN 422

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
           T +G + A+ L  ++P++   Y+LL+N+YAS   WE V+K R+ M   EVKKE G S + 
Sbjct: 423 TLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIV 482

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
           +     VF+AG+ SHP K+ I+  L+EL+ +M+  GY+P T   L DLE + KE  + +H
Sbjct: 483 LGKESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWH 542

Query: 868 SEKIAVAFVLTRN-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
           SE++AVA+ L +    + + I+KNLRVCGDCH+  KFIS IV REIV+RD+NR+HHF DG
Sbjct: 543 SERLAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDG 602

Query: 927 KCSCGDYW 934
           KCSC ++W
Sbjct: 603 KCSCNNFW 610



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 201/436 (46%), Gaps = 38/436 (8%)

Query: 106 FGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY 165
            G ++HC ++K+       +SN LI MYG C    D A  +F ++  RD ISW SI++  
Sbjct: 21  IGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQD-ALNLFNQLPHRDPISWASILTAN 79

Query: 166 SQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKA 225
           +Q         +F  M ++     L+P+ Y F  L+ A   ++L      +Q+ A    +
Sbjct: 80  NQANLPHLTLSMFPAMFKQD---GLQPDHYVFACLVKAC--AILGAMKQGKQVHATFIVS 134

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS 285
            +  D  V S+LV  +A+ G     R +F+ +  KN +S   ++ G              
Sbjct: 135 PVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISG-------------- 180

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
                          YA+ G   D+  +F+ M  K+ +SW  +ISGL Q+G + ++   F
Sbjct: 181 ---------------YAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLF 225

Query: 346 CAMRRDGL-MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
             MR  G+ +   F L S + + A+L  + LG+QIH   + LG +S + VSNAL+ +YA 
Sbjct: 226 MEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAK 285

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
              +    K+F  M + D VSW S+I   A    L  EA+  Y  M   G  PN VTF+ 
Sbjct: 286 CSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQ-HGLAEEALSLYNRMLSTGLKPNEVTFVG 344

Query: 465 ILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           ++ A S   +   G      +IK Y +         LL    + G +++ E +   M  +
Sbjct: 345 LIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFK 404

Query: 524 RDEVSWNSMISGYIHN 539
            DE +W +++S   H+
Sbjct: 405 PDEATWAALLSACNHH 420



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 195/404 (48%), Gaps = 43/404 (10%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK++H ++I++G+    ++ N L+NMY KCG I D+ ++F  +  +D +SW ++++  +Q
Sbjct: 22  GKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQ 81

Query: 335 NGCYEEAIMNFCAM-RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
                  +  F AM ++DGL   ++     + +CA LG +  G+Q+H   +   +  D  
Sbjct: 82  ANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDV 141

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS----------------- 436
           V ++L+ +YA  G       VF  +   + +SW ++I  +A S                 
Sbjct: 142 VKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKN 201

Query: 437 ----EALVSEAVK---------YYLDMRRAGWS-PNGVTFINILAAASSFSMGKLGHQVH 482
                AL+S  V+          +++MR  G    +     +I+ A+++ ++  LG Q+H
Sbjct: 202 LLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIH 261

Query: 483 AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
             VI     +   + NAL+  Y KC ++   +KIF RM + RD VSW S+I G   + L 
Sbjct: 262 CLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQ-RDIVSWTSIIVGTAQHGLA 320

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-----VHACGVRACLEFDVV 597
            +A++L   M+  G + +  TF  ++ AC+ V  + +G       +   G+   L+    
Sbjct: 321 EEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQH--- 377

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARH 640
             + L+D+ S+ G ++ A      MP + +  +W +++S    H
Sbjct: 378 -YTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHH 420



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 197/452 (43%), Gaps = 45/452 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  I+K G      L N LIN+Y + G +  A  LF+++P R+ +SWA I++     
Sbjct: 23  KKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQA 82

Query: 65  GMSNEACKMFKEMVRA-GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            + +    MF  M +  G   + Y    +++AC   G    K G QVH   + S  + D 
Sbjct: 83  NLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILG--AMKQGKQVHATFIVSPVSDDD 140

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           +V + L+ MY  C    D  R +F+ I +++ ISW ++IS Y+Q G  +   +LF +M  
Sbjct: 141 VVKSSLVDMYAKC-GLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPV 199

Query: 184 EGFR--YSLKPNEYTFGSLITAAY------------------SSVLSGSYLL------QQ 217
           +      +L       G+ + + Y                  SS++  S  L      +Q
Sbjct: 200 KNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQ 259

Query: 218 ILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----- 272
           I  +V   G  S L+V +ALV  +A+  +   A+KIF +M+Q+++VS   ++ G      
Sbjct: 260 IHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGL 319

Query: 273 -RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WN 326
             +   ++  ++ +GL        GL+   +  G +   R  F  MI    ++     + 
Sbjct: 320 AEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYT 379

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            ++  L ++G  EEA     AM          +  + LS+C      ++G ++    L L
Sbjct: 380 CLLDLLSRSGHLEEAENLIKAM---PFKPDEATWAALLSACNHHRNTLIGIRVADHLLSL 436

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
             + D S    L ++YA A       KV  LM
Sbjct: 437 KPE-DPSTYILLSNIYASAAMWESVSKVRRLM 467



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 125/290 (43%), Gaps = 44/290 (15%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H   +    + D  + ++L+++Y + G       +FD +  +NS+SW  ++SGY
Sbjct: 122 KQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGY 181

Query: 62  THKGMSNEACKMFKEM---------------VRAGF-----------------LLNRYAL 89
              G   +A ++F++M               V++G                  +++ + L
Sbjct: 182 AQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFIL 241

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
            S++ A       G   G Q+HCLV+         VSN L+ MY  C      A++IF  
Sbjct: 242 SSIIGASANLAVLG--LGKQIHCLVILLGYESSLFVSNALVDMYAKC-SDVLAAKKIFGR 298

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA--YSS 207
           +  RD++SW SII   +Q G       L++RM   G    LKPNE TF  LI A      
Sbjct: 299 MVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTG----LKPNEVTFVGLIYACSHVGL 354

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
           V  G Y      +M+K  G+   L   + L+   +R G+   A  + + M
Sbjct: 355 VSKGRYFFN---SMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAM 401


>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
 gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 220/579 (37%), Positives = 335/579 (57%), Gaps = 11/579 (1%)

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           +  L +C +L  +    Q+H   +KLG  ++  V     S  ++   +   + + F + +
Sbjct: 11  LDILQACNTLPKL---AQLHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVED 67

Query: 421 ---HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
              +D   ++++I A+A+S      A+ YY  M   G SPN   F  +L A +      L
Sbjct: 68  ARVYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNL 127

Query: 478 GHQVHAQVIKYNVANETTIENALLSCYGKC-GEMDDCEKIFARMSERRDEVSWNSMISGY 536
           G  VH  ++K+   ++  ++N ++  Y  C G M+   K+F  M  + D V+W +MI GY
Sbjct: 128 GKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMP-KLDPVTWTAMIGGY 186

Query: 537 IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDV 596
                   A+ L   M   G   D  T  +VLSAC  +  LE G  + +   +  +   V
Sbjct: 187 ARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTV 246

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD 656
            + +ALVDM++KCG +D A   F  M  R + SW S+I G A HG G +A++LF +MK  
Sbjct: 247 ELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKAS 306

Query: 657 GPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDK 716
           G +P+ + F+G+LSACSH+GLV+ G ++F  M++ +G++P++E + CMVDLL RAG + +
Sbjct: 307 GMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTE 366

Query: 717 IEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMY 776
             EF+ +MPI PN +IWRT++ A CR +  + +LG   +  L   EP +  NYVLL+N+Y
Sbjct: 367 ALEFVERMPIEPNPIIWRTLISA-CRVH-GELKLGESISKQLIRNEPMHESNYVLLSNIY 424

Query: 777 ASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELN 836
                WE  +K R AM +  ++K  G + + + + +H F+ GD SH + + I + + E+ 
Sbjct: 425 GKMLDWEKKSKIRVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMG 484

Query: 837 QKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCG 895
           ++M+ AGY P T     D++ E KED +S HSEK+A+AF L       PIRI KNLRVCG
Sbjct: 485 REMKRAGYAPTTTEVFLDIDEEDKEDALSRHSEKLAIAFALLNTPPGSPIRITKNLRVCG 544

Query: 896 DCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           DCHSA KFISKI  REIV+RD +RFHHF DG+CSCGD+W
Sbjct: 545 DCHSASKFISKIYNREIVMRDRSRFHHFRDGQCSCGDFW 583



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 160/325 (49%), Gaps = 11/325 (3%)

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
           AI  +  M   G+  + ++    L +CA L  + LG+ +HG  +K G D D+ V N ++ 
Sbjct: 93  AIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVH 152

Query: 401 LY-ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
           +Y   +G +    K+F  MP+ D V+W ++IG +A      + AV  +  M+ AG  P+ 
Sbjct: 153 MYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYA-RLGQSAGAVGLFRKMQIAGVCPDD 211

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           VT +++L+A +     +LG  + + + K  V     + NAL+  + KCG++D    +F  
Sbjct: 212 VTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRN 271

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           MS +R  VSW S+I G   +    +A++L   M   G   +   F  +LSAC+    +ER
Sbjct: 272 MS-KRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVER 330

Query: 580 GMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMI 634
           G +  +   R   +F +V        +VD+ S+ G +  A  F + MP+  N   W ++I
Sbjct: 331 GRQYFSEMTR---QFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLI 387

Query: 635 SGYARHGHGDKALTLFSQMKLDGPL 659
           S    HG      ++  Q+  + P+
Sbjct: 388 SACRVHGELKLGESISKQLIRNEPM 412



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 135/270 (50%), Gaps = 4/270 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKC-GTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           GK VHG L++ G  D + V N +V+MY  C G ++ +R +F  M   D V+W  MI G  
Sbjct: 128 GKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYA 187

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           + G    A+  F  M+  G+   + +++S LS+C  LG + LG+ I     K  +   V 
Sbjct: 188 RLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVE 247

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           +SNAL+ ++A  G + + L +F  M +   VSW SVI   A       EAV  + +M+ +
Sbjct: 248 LSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLA-MHGRGLEAVSLFEEMKAS 306

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDD 512
           G  P  + FI +L+A S   + + G Q  +++ + + +  +      ++    + G + +
Sbjct: 307 GMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTE 366

Query: 513 CEKIFARMSERRDEVSWNSMISG-YIHNEL 541
             +   RM    + + W ++IS   +H EL
Sbjct: 367 ALEFVERMPIEPNPIIWRTLISACRVHGEL 396



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 129/281 (45%), Gaps = 14/281 (4%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRV-GDLASASKLFDEMPDRNSVSWACIVSGYT 62
            K  H  ++K GF  D+F+ NT++++Y    G +  A KLFDEMP  + V+W  ++ GY 
Sbjct: 128 GKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYA 187

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G S  A  +F++M  AG   +   + SVL AC + G    + G  +   + K      
Sbjct: 188 RLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLG--ALELGKWIESYIEKERVLKT 245

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             +SN L+ M+  C +  D A  +F  +  R ++SW S+I   +  G  +    LF  M+
Sbjct: 246 VELSNALVDMFAKCGD-VDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMK 304

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             G    + P +  F  L++A   S L      Q    M ++ G++  +     +V   +
Sbjct: 305 ASG----MVPEDIAFIGLLSACSHSGLV-ERGRQYFSEMTRQFGIVPKIEHYGCMVDLLS 359

Query: 243 RLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVHGYL 282
           R G    A +  E+M I+ N +    L+   R    VHG L
Sbjct: 360 RAGLVTEALEFVERMPIEPNPIIWRTLISACR----VHGEL 396



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 12/215 (5%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLMEG------RRKGKEVH 279
           D    +A++ G+ARLG    A  +F +M    +  + V+M  ++           GK + 
Sbjct: 175 DPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIE 234

Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
            Y+ +  +   V + N LV+M+AKCG +D +  +FR M  +  VSW ++I GL  +G   
Sbjct: 235 SYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGL 294

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVSNAL 398
           EA+  F  M+  G++  + + I  LS+C+  G +  G+Q   E  +  G+   +     +
Sbjct: 295 EAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCM 354

Query: 399 LSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
           + L + AG ++  L+    MP E + + W ++I A
Sbjct: 355 VDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISA 389



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/388 (23%), Positives = 165/388 (42%), Gaps = 26/388 (6%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR---NSVSWACIVSGYTH 63
            H  I+K GF  +  +     +    +  +  A  L   + D    ++  ++ I+  Y  
Sbjct: 26  LHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDARVYDAFLFSTIIRAYAE 85

Query: 64  KGMS-NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
              S + A   +  M+  G   N+YA   VL+AC   G      G  VH  ++K     D
Sbjct: 86  SSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKAC--AGLRDLNLGKAVHGSLVKFGFDDD 143

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V N ++ MY  C    + AR++F+E+   D ++W ++I  Y++ G +     LF +MQ
Sbjct: 144 IFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQ 203

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             G    + P++ T  S+++A     L    L + I + ++K  +L  + + +ALV  FA
Sbjct: 204 IAG----VCPDDVTMVSVLSACTD--LGALELGKWIESYIEKERVLKTVELSNALVDMFA 257

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGLFDMVAVGNGLVN 299
           + G+   A  +F  M ++ +VS   ++ G     +G E            MV      + 
Sbjct: 258 KCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIG 317

Query: 300 MYAKC---GTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           + + C   G ++  R  F     +F I      +  M+  L + G   EA + F  + R 
Sbjct: 318 LLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEA-LEF--VERM 374

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQI 379
            +  +     + +S+C   G + LG+ I
Sbjct: 375 PIEPNPIIWRTLISACRVHGELKLGESI 402


>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 884

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 264/845 (31%), Positives = 422/845 (49%), Gaps = 82/845 (9%)

Query: 5   KLFHLQILKHGFAYDV-FLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           +  H +I K   ++++ FL   L+ +Y + G L  A K+FDEMPDR + +W  ++  Y  
Sbjct: 100 RQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVS 159

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G    A  ++  M   G  L   +  ++L+AC +      + G ++H L++K      G
Sbjct: 160 NGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL--RDIRSGSELHSLLVKLGYHSTG 217

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETR-DLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            + N L++MY    +    ARR+F+  + + D + WNSI+S YS  G ++   +LF  M 
Sbjct: 218 FIVNALVSMYAKN-DDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH 276

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
             G      PN YT                                        +VS   
Sbjct: 277 MTG----PAPNSYT----------------------------------------IVSALT 292

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNMY 301
               F YA+                       GKE+H  +++S      + V N L+ MY
Sbjct: 293 ACDGFSYAKL----------------------GKEIHASVLKSSTHSSELYVCNALIAMY 330

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
            +CG +  +  + R M   D V+WN++I G  QN  Y+EA+  F  M   G  S   S+ 
Sbjct: 331 TRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMT 390

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S +++   L  ++ G ++H   +K G DS++ V N L+ +Y+         + F  M + 
Sbjct: 391 SIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDK 450

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D +SW +VI  +A ++  V EA++ + D+ +     + +   +IL A+S      +  ++
Sbjct: 451 DLISWTTVIAGYAQNDCHV-EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 509

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H  +++  + + T I+N L+  YGKC  M    ++F  + + +D VSW SMIS    N  
Sbjct: 510 HCHILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESI-KGKDVVSWTSMISSSALNGN 567

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA--CLEFDVVIG 599
             +A+ L   M++ G   D      +LSA AS++ L +G E+H   +R   CLE  + + 
Sbjct: 568 ESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV- 626

Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
            A+VDMY+ CG +  A   FD +  + +  + SMI+ Y  HG G  A+ LF +M+ +   
Sbjct: 627 -AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVS 685

Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           PDH++F+ +L ACSHAGL+DEG    K M   Y L P  E + C+VD+LGRA  + +  E
Sbjct: 686 PDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFE 745

Query: 720 FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASG 779
           F+  M   P + +W  +L A CR++  K E+G  AA  L E+EP+N  N VL++N++A  
Sbjct: 746 FVKMMKTEPTAEVWCALLAA-CRSHSEK-EIGEIAAQRLLELEPKNPGNLVLVSNVFAEQ 803

Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
           G+W DV K R  MK + ++K  GCSW+ M   VH F A D+SHPE   IYEKL E+ +K+
Sbjct: 804 GRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKL 863

Query: 840 -RDAG 843
            R+ G
Sbjct: 864 EREKG 868



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 139/587 (23%), Positives = 251/587 (42%), Gaps = 98/587 (16%)

Query: 1   SKDAKLFHLQILKHG-FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           +K  K  H  +LK    + ++++CN LI +Y R G +  A ++  +M + + V+W  ++ 
Sbjct: 300 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 359

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           GY    M  EA + F +M+ AG   +  ++ S++ A      S    GM++H  V+K   
Sbjct: 360 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRL--SNLLAGMELHAYVIKHGW 417

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             +  V N LI MY  C   T    R F  +  +DLISW ++I+ Y+Q    +   +LF 
Sbjct: 418 DSNLQVGNTLIDMYSKC-NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF- 475

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
              R+  +  ++ +E   GS++ A  SSVL    ++++I   + + GLL D  + + LV 
Sbjct: 476 ---RDVAKKRMEIDEMILGSILRA--SSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVD 529

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--------------RR------------ 273
            + +  N  YA ++FE +  K+VVS   ++                RR            
Sbjct: 530 VYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVA 589

Query: 274 ---------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
                          KG+E+H YL+R G     ++   +V+MYA CG +  +++VF  + 
Sbjct: 590 LLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE 649

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
            K  + + +MI+    +GC + A+  F  MR + +   + S ++ L +C+  G +  G+ 
Sbjct: 650 RKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGR- 708

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
                                      G+L        +  E++   W        D   
Sbjct: 709 ---------------------------GFLK------IMEHEYELEPWPEHYVCLVDMLG 735

Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS---MGKLGHQVHAQVIKYNVANETT 495
             +  V+ +  ++     P    +  +LAA  S S   +G++  Q   ++   N  N   
Sbjct: 736 RANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVL 795

Query: 496 IENALLSCYGKCGEMDDCEKIFARMS----ERRDEVSWNSMISGYIH 538
           + N     + + G  +D EK+ A+M     E+    SW  M  G +H
Sbjct: 796 VSNV----FAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEM-DGKVH 837


>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
 gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
          Length = 627

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 227/634 (35%), Positives = 357/634 (56%), Gaps = 45/634 (7%)

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASL----GWIMLGQQIHGEGLKLGLDSDVSV 394
           E+A+  +  M   G     ++  + L + A      G     + +H   ++LG+  +  V
Sbjct: 1   EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHD-QVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           +++L++ Y   G  +       L+ E D  V+WN++I    +      E+   ++DM RA
Sbjct: 61  ASSLVAAYTAGGDGA---AARALVGECDTPVAWNALISGH-NRGGRFGESCGSFVDMARA 116

Query: 454 GWSPNGVTFINILAAASSFSMGKL-GHQVHAQVIKYNVANETTIENALLSCYGKC----- 507
           G +P  VT++++L+A    +   L G QVH +V+   V  +  +ENAL+  Y +C     
Sbjct: 117 GAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGS 176

Query: 508 --------------------------GEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
                                     G++D+   +F RM ER D VSW +MI GY+    
Sbjct: 177 AWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPER-DTVSWTAMIDGYVWAAR 235

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +A+ +   M       D FT  +V++ACA +  LE G  V     R  ++ D  +G+A
Sbjct: 236 FREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNA 295

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           L+DMYSKCG I+ A   F  M  R+ ++W ++I G A +G+ ++A+ +F +M      PD
Sbjct: 296 LIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPD 355

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            VTF+GVL+AC+HAGLVD+G + F SM + Y + P +  + C++DLLGRAG++ +  + I
Sbjct: 356 EVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTI 415

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
           ++MP+TPNS IW T+L A CR +   +E+G   A  L E++P+N++ Y+LL+N+YA   +
Sbjct: 416 DQMPMTPNSTIWGTLLAA-CRVHG-NSEIGELVAERLLELDPENSMVYILLSNIYAKCNR 473

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
           WEDV + R A+ E  +KKE GCS + M   +H FVAGD+SHP    IY KL+ +   + +
Sbjct: 474 WEDVRRLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDLNN 533

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSA 900
            GY P       ++  + K+ ++ +HSEK+A+AF +L+      IRI+KNLR+C DCH+A
Sbjct: 534 VGYFPDVTEVFVEVAEKEKKKVLYWHSEKLAIAFALLSSKPNTVIRIVKNLRMCLDCHNA 593

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            K IS++ GRE+V+RD  RFHHF  G CSC DYW
Sbjct: 594 IKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 627



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 177/384 (46%), Gaps = 42/384 (10%)

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA---AYSSVLSGS 212
           ++WN++IS +++ G        F  M R G      P   T+ S+++A       VL G 
Sbjct: 88  VAWNALISGHNRGGRFGESCGSFVDMARAG----AAPTPVTYVSVLSACGKGTRDVLLG- 142

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR 272
               Q+   V  +G+L DL V +ALV  +A   +   A K+F+ M  ++VVS   L+   
Sbjct: 143 ---MQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLL--- 196

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
                       SGL              A+ G +D++R +F  M  +D+VSW  MI G 
Sbjct: 197 ------------SGL--------------ARLGQVDEARDLFDRMPERDTVSWTAMIDGY 230

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
                + EA+  F  M+   + +  F+++S +++CA LG + +G+ +     + G+  D 
Sbjct: 231 VWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDA 290

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V NAL+ +Y+  G + R L VF  M   D+ +W ++I   A       EA++ +  M R
Sbjct: 291 FVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLA-VNGYEEEAIEMFHRMIR 349

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMD 511
              +P+ VTFI +L A +   +   G +    +I+ YN+A        ++   G+ G++ 
Sbjct: 350 VSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKIT 409

Query: 512 DCEKIFARMSERRDEVSWNSMISG 535
           +      +M    +   W ++++ 
Sbjct: 410 EALDTIDQMPMTPNSTIWGTLLAA 433



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 141/323 (43%), Gaps = 15/323 (4%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
            +L++   R+G +  A  LFD MP+R++VSW  ++ GY       EA +MF+EM  +   
Sbjct: 193 TSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVS 252

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
            + + + SV+ AC + G    + G  V   + +     D  V N LI MY  C  S + A
Sbjct: 253 ADEFTMVSVITACAQLG--ALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKC-GSIERA 309

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
             +F+ +  RD  +W +II   +  G      ++F RM     R S  P+E TF  ++TA
Sbjct: 310 LDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRM----IRVSETPDEVTFIGVLTA 365

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
              + L      +  L+M++   +  ++     ++    R G    A    +QM      
Sbjct: 366 CTHAGLVDKG-REFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNS 424

Query: 264 SMNG--LMEGRRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFRFM 317
           ++ G  L   R  G    G L+   L ++    +     L N+YAKC   +D R   R  
Sbjct: 425 TIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRR-LRHA 483

Query: 318 IGKDSVSWNTMISGLDQNGCYEE 340
           I +  +      S ++ +G   E
Sbjct: 484 IMEKGIKKEPGCSLIEMDGIIHE 506



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 190/440 (43%), Gaps = 52/440 (11%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           A+  H  +++ G   +  + ++L+  Y   GD A+A  L  E      V+W  ++SG+  
Sbjct: 42  ARAVHAHVVRLGMGRNAHVASSLVAAYTAGGDGAAARALVGECD--TPVAWNALISGHNR 99

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   E+C  F +M RAG         SVL AC + G      GMQVH  V+ S    D 
Sbjct: 100 GGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGK-GTRDVLLGMQVHGRVVGSGVLPDL 158

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V N L+ MY  C +    A ++F+ ++ R ++SW S++S  ++ G       LF RM  
Sbjct: 159 RVENALVDMYAECAD-MGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPE 217

Query: 184 EG----------------FRYSLK-----------PNEYTFGSLITAAYSSVLSGSYLLQ 216
                             FR +L+            +E+T  S+ITA   + L    + +
Sbjct: 218 RDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITAC--AQLGALEMGE 275

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG----- 271
            +   + + G+  D +VG+AL+  +++ G+   A  +F+ M  ++  +   ++ G     
Sbjct: 276 WVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNG 335

Query: 272 -RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM-----IGKDSVSW 325
              +  E+   +IR           G++      G +D  R  F  M     I  + V +
Sbjct: 336 YEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHY 395

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST-LSSCASLGWIMLGQQIHGEGL 384
             +I  L + G   EA+     M     M+ N ++  T L++C   G   +G+ +  E L
Sbjct: 396 GCIIDLLGRAGKITEALDTIDQMP----MTPNSTIWGTLLAACRVHGNSEIGELV-AERL 450

Query: 385 KLGLDSDVSVSNALLS-LYA 403
            L LD + S+   LLS +YA
Sbjct: 451 -LELDPENSMVYILLSNIYA 469


>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/619 (37%), Positives = 337/619 (54%), Gaps = 15/619 (2%)

Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
           S  WNT +  L +   + +A+  +  M R G   + F+    L SCA+L   +LG Q HG
Sbjct: 5   STPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHG 64

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF--FLMPEHDQVSWNSVIGAFADSEAL 439
           +  K+G   +  V   L+S+Y     +    KVF          V +N+++  +  S + 
Sbjct: 65  QITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYV-SNSK 123

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
            S+AV  +  M   G   N VT + ++ A  S    +LG  +H   +KY   ++ ++ N 
Sbjct: 124 CSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNC 183

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
            ++ Y KCG ++  +K+F  M   +  +SWN+M+SGY  N L    + L   M   G   
Sbjct: 184 FITMYMKCGSVNYAQKLFDEMP-VKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHP 242

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           D  T   VLS+CA++     G EV      +    +  + +AL++MY++CG +  A   F
Sbjct: 243 DPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVF 302

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           D MP R + SW ++I GY  HGHG+ A+ LF +M   G  PD   FV VLSACSHAGL D
Sbjct: 303 DGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTD 362

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           +G ++FK M + Y L P  E +SCMVDLLGRAG L + +  I  MPI P+  +W  +LGA
Sbjct: 363 QGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGA 422

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKK 799
           C     +  EL   A   + E+EP+N   YVLL+N+Y++    + V + R  MKE ++KK
Sbjct: 423 C--KIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKK 480

Query: 800 EAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES 859
           + GCS+V +K  VH F+ GD +H + D IY  L+EL   +      P+      D   ES
Sbjct: 481 DPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEK-----DNREES 535

Query: 860 KED---LVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLR 915
            +D    V  HSEK+AVAF +L   +   + I+KNLR+C DCH  FK +SKIV R++ +R
Sbjct: 536 NKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVR 595

Query: 916 DSNRFHHFNDGKCSCGDYW 934
           D+ RFHHF +G CSC DYW
Sbjct: 596 DATRFHHFRNGSCSCKDYW 614



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 189/422 (44%), Gaps = 53/422 (12%)

Query: 157 SWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ 216
            WN+ +   ++R   +    L+ +M R G R    PN +TF   + +   + LS   L  
Sbjct: 7   PWNTQLRELAKRCQFLQALSLYPQMLRHGDR----PNAFTFPFALKSC--AALSLPILGS 60

Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI--QKNVVSMNGLMEGR-- 272
           Q    + K G + + +V + L+S + +      ARK+FE+    +K  V  N L+ G   
Sbjct: 61  QFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVS 120

Query: 273 ---------------------------------------RKGKEVHGYLIRSGLFDMVAV 293
                                                    G  +H   ++ G    V+V
Sbjct: 121 NSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSV 180

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
            N  + MY KCG+++ ++ +F  M  K  +SWN M+SG  QNG     +  +  M  +G+
Sbjct: 181 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 240

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
                +L+  LSSCA+LG   +G ++  +    G  S+  ++NAL+++YA  G L++   
Sbjct: 241 HPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQA 300

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           VF  MPE   VSW ++IG +         AV+ + +M R+G  P+G  F+ +L+A S   
Sbjct: 301 VFDGMPERTLVSWTAIIGGYG-MHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAG 359

Query: 474 MGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
           +   G + + +++K N   E   E+   ++   G+ G + + + +   M  + D   W +
Sbjct: 360 LTDQGLE-YFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGA 418

Query: 532 MI 533
           ++
Sbjct: 419 LL 420



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 159/324 (49%), Gaps = 27/324 (8%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDE--MPDRNSVSWACIVSGYTHK 64
           FH QI K G  ++ F+   LI++Y +   + +A K+F+E     + +V +  +VSGY   
Sbjct: 62  FHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSN 121

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
              ++A  +F++M   G  +N   L  ++ AC    P   + G  +HC  LK     D  
Sbjct: 122 SKCSDAVLLFRQMNEEGVPVNSVTLLGLIPAC--VSPINLELGSSLHCSTLKYGFDSDVS 179

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V N  I MY  C  S + A+++F+E+  + LISWN+++S Y+Q G   +V +L+  M   
Sbjct: 180 VVNCFITMYMKC-GSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMN 238

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G    + P+  T   ++++  +  L    +  ++   ++ +G  S+ ++ +AL++ +AR 
Sbjct: 239 G----VHPDPVTLVGVLSSCAN--LGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARC 292

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHG--------YLIRSGLFDMVAVGNG 296
           GN   A+ +F+ M ++ +VS   ++ G   G   HG         +IRSG+      G  
Sbjct: 293 GNLTKAQAVFDGMPERTLVSWTAIIGGY--GMHGHGEIAVQLFKEMIRSGI---EPDGTA 347

Query: 297 LVNMYAKC---GTIDDSRSVFRFM 317
            V + + C   G  D     F+ M
Sbjct: 348 FVCVLSACSHAGLTDQGLEYFKMM 371



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 120/257 (46%), Gaps = 14/257 (5%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   LK+GF  DV + N  I +Y++ G +  A KLFDEMP +  +SW  +VSGY   G+
Sbjct: 165 LHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGL 224

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           +    ++++ M   G   +   L  VL +C   G      G +V   +  S  T +  ++
Sbjct: 225 ATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQ--SVGHEVEFKMQASGFTSNPFLN 282

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI MY  C   T  A+ +F+ +  R L+SW +II  Y   G      +LF  M R G 
Sbjct: 283 NALINMYARCGNLTK-AQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSG- 340

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL---SDLYVGSALVSGFAR 243
              ++P+   F  +++A   + L+   L  +   M+K+   L    + Y  S +V    R
Sbjct: 341 ---IEPDGTAFVCVLSACSHAGLTDQGL--EYFKMMKRNYQLEPGPEHY--SCMVDLLGR 393

Query: 244 LGNFYYARKIFEQMIQK 260
            G    A+ + E M  K
Sbjct: 394 AGRLKEAQTLIESMPIK 410



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 168/410 (40%), Gaps = 56/410 (13%)

Query: 69  EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV 128
           +A  ++ +M+R G   N +     L++C     S    G Q H  + K    F+  V   
Sbjct: 23  QALSLYPQMLRHGDRPNAFTFPFALKSCAAL--SLPILGSQFHGQITKVGCVFEPFVQTG 80

Query: 129 LIAMYGSCLES-TDCARRIFEE-IETRDL-ISWNSIISVYSQRGDTISVFKLFSRMQREG 185
           LI+MY  C  S  D AR++FEE   +R L + +N+++S Y           LF +M  EG
Sbjct: 81  LISMY--CKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEG 138

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
               +  N  T   LI A  S +     L   +     K G  SD+ V +  ++ + + G
Sbjct: 139 ----VPVNSVTLLGLIPACVSPI--NLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCG 192

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------- 274
           +  YA+K+F++M  K ++S N ++ G  +                               
Sbjct: 193 SVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLS 252

Query: 275 ----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                     G EV   +  SG      + N L+NMYA+CG +  +++VF  M  +  VS
Sbjct: 253 SCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVS 312

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEG 383
           W  +I G   +G  E A+  F  M R G+     + +  LS+C+  G    G +      
Sbjct: 313 WTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMK 372

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
               L+      + ++ L   AG L     +   MP + D   W +++GA
Sbjct: 373 RNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGA 422


>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
          Length = 665

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 238/653 (36%), Positives = 347/653 (53%), Gaps = 88/653 (13%)

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           L +   SC +L    L + +H      GL  D  V+++LL  Y   G       +F  MP
Sbjct: 23  LPTAFKSCPTLP---LARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMP 79

Query: 420 EHDQ--VSWNSVIGAFA---DSEALVSEAVKYYLDMRR-AGWSPNGVTFINI-------- 465
              +  V W++++ A A   D+E     A +   +MRR  G  PN +T+  +        
Sbjct: 80  RPQRTVVGWSALVAAHAARGDAEG----AWRLLEEMRRDGGVEPNVITWNGLVSGLNRSG 135

Query: 466 ----------------------------LAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
                                       L+A     +  +G Q+H   +K     +  + 
Sbjct: 136 RARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVV 195

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ 557
            AL+  YGKCG+  +  ++F   S   D  S N++I+G   N  + +A+ L    + RG 
Sbjct: 196 TALIDMYGKCGQAAEVVRVFDE-SSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGV 254

Query: 558 RLDHFTFATVLSAC-----------------------------------ASVATLERGME 582
            L+  ++ ++++ C                                   A+VA L  G  
Sbjct: 255 ELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRS 314

Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
            H   +R     DV + SALVDMY+KCGR+  A   FD M  RNV SWN+MI GYA +G 
Sbjct: 315 AHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGE 374

Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
              A+ +F  M      PD VTF  +L+AC+ AGL +EG  +FK M   YG+ P++E ++
Sbjct: 375 AVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYA 434

Query: 703 CMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEME 762
           CMV LLGRAG+LD+  + I+ MP  P++ IW ++LG+ CR +    +L   AA  LF +E
Sbjct: 435 CMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGS-CRVH-GNVDLAEVAAEKLFHLE 492

Query: 763 PQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESH 822
           P+NA NYVLL+N+YAS   W+ V + R+ MK+  +KKE GCSW+ +K+ VH+ +AGD+SH
Sbjct: 493 PENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSH 552

Query: 823 PEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK 882
           P    I EK+ +LN +MR  G+VP T F L D+E + K+D+++ HSEK+AVA  L   S 
Sbjct: 553 PMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVALGLISTSP 612

Query: 883 -LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
              +R++KNLR+CGDCH A KFIS   GREI +RD+NRFHHF+ GKCSCGD+W
Sbjct: 613 GTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSCGDFW 665



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 127/513 (24%), Positives = 209/513 (40%), Gaps = 88/513 (17%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVSGY 61
           A+  H      G A D F+ ++L++ Y+R+G   +A  LFD MP   R  V W+ +V+ +
Sbjct: 36  ARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAH 95

Query: 62  THKGMSNEACKMFKEMVRAGFL-------------LNR--------YALGS-----VLR- 94
             +G +  A ++ +EM R G +             LNR         AL +     +LR 
Sbjct: 96  AARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRP 155

Query: 95  -------ACQECGPSGF-KFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRI 146
                  A    G  G    G Q+H   +K+    D  V   LI MYG C ++ +  R +
Sbjct: 156 DATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVR-V 214

Query: 147 FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS 206
           F+E    D+ S N++I+  S+        +LF      G       N  ++ S++     
Sbjct: 215 FDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVEL----NVVSWTSIVACC-- 268

Query: 207 SVLSGSYLLQ-QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
            V +G  L   +    ++  G   +      ++  FA +                     
Sbjct: 269 -VQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVA-------------------- 307

Query: 266 NGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
             LM GR      H + +R G    V V + LV+MYAKCG + D+R +F  M+ ++ VSW
Sbjct: 308 -ALMHGR----SAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSW 362

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG----QQIHG 381
           N MI G    G    A+  F +M +        +    L++C   G    G    +++H 
Sbjct: 363 NAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHN 422

Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAF-----AD 435
           E    G+   +     +++L   AG L     +   MP E D   W S++G+       D
Sbjct: 423 E---YGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVD 479

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
              + +E + ++L+   AG   N V   NI A+
Sbjct: 480 LAEVAAEKL-FHLEPENAG---NYVLLSNIYAS 508



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 114/478 (23%), Positives = 203/478 (42%), Gaps = 77/478 (16%)

Query: 101 PSGFK------FGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE--T 152
           P+ FK          +H +   S    D  V++ L+  Y   L +T  AR +F+ +    
Sbjct: 24  PTAFKSCPTLPLARALHAVAEVSGLARDPFVASSLLHAYLR-LGTTGNARALFDGMPRPQ 82

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGS 212
           R ++ W+++++ ++ RGD    ++L   M+R+G    ++PN  T+  L++    S  +  
Sbjct: 83  RTVVGWSALVAAHAARGDAEGAWRLLEEMRRDG---GVEPNVITWNGLVSGLNRSGRARD 139

Query: 213 YLLQQILAMVKKAGLLSDLYVG-SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
            ++   LA +   GLL     G S  +S    +G                +VS+      
Sbjct: 140 AVVA--LATMHGEGLLRPDATGVSCALSAVGDVG----------------LVSV------ 175

Query: 272 RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
              G+++HGY +++G      V   L++MY KCG   +   VF      D  S N +I+G
Sbjct: 176 ---GQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAG 232

Query: 332 LD-----------------------------------QNGCYEEAIMNFCAMRRDGLMSS 356
           L                                    QNG   EA+  F  M+  G   +
Sbjct: 233 LSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPN 292

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
           + ++   L + A++  +M G+  H   L+ G   DV VS+AL+ +YA  G +     +F 
Sbjct: 293 SVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFD 352

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
            M   + VSWN++IG +A     V+ AV  +  M +    P+ VTF  +LAA +   + +
Sbjct: 353 TMVSRNVVSWNAMIGGYAMYGEAVN-AVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTE 411

Query: 477 LG-HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            G H       +Y V+        +++  G+ G++D+   + + M    D   W S++
Sbjct: 412 EGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLL 469



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 6/174 (3%)

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
           +P + +L  F+       D     T   +C    TL     +HA    + L  D  + S+
Sbjct: 1   MPHSSSLHHFLRHVSFPPDPHLLPTAFKSCP---TLPLARALHAVAEVSGLARDPFVASS 57

Query: 602 LVDMYSKCGRIDYASRFFDLM--PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
           L+  Y + G    A   FD M  P R V  W+++++ +A  G  + A  L  +M+ DG +
Sbjct: 58  LLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGV 117

Query: 660 -PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG 712
            P+ +T+ G++S  + +G   +      +M     L P     SC +  +G  G
Sbjct: 118 EPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVG 171


>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
 gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
          Length = 548

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 206/549 (37%), Positives = 323/549 (58%), Gaps = 6/549 (1%)

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
           G + D  + N +L ++   G +    ++F  MPE + VSWN++I    D    + EA + 
Sbjct: 5   GFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFM-EAFRL 63

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
           +L+M          TF  ++ A++   +  +G Q+HA  +K  + ++  +  AL+  Y K
Sbjct: 64  FLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSK 123

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
           CG ++D   +F  M E+   V WN++I+GY  +    +A+++ + M   G ++DHFTF+ 
Sbjct: 124 CGSIEDARFVFEEMPEK-TTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSM 182

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           ++  CA +A++E   + HA  +R     D+V  +ALVD YSK GRI+ A   FD M  +N
Sbjct: 183 IVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKN 242

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
           V SWN++I GY  HG G +A+ LF QM  +   P+H+TF+ VLSACSH+GL + G++ F+
Sbjct: 243 VISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQ 302

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
           SM +   + P+   ++CM++L+GR G LD+    I   P  P + +W  +L A CR N  
Sbjct: 303 SMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTA-CRVN-E 360

Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
             ELG+ AA  L+ MEP    NY++L N+Y S G  ++ A     +K   ++    CSW+
Sbjct: 361 NFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSWI 420

Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSY 866
            +K   HVF++GD  HP++  IY+K+ +L  ++   GYVP  K  L D++ E +E +  Y
Sbjct: 421 EVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVD-EQEERVRLY 479

Query: 867 HSEKIAVAFVLTRNSKL-PIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFND 925
           HSEK+A+AF L       P++I++  R+CGDCH A K I+++ GREIV+RD+ RFHHF  
Sbjct: 480 HSEKLAIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGRFHHFKH 539

Query: 926 GKCSCGDYW 934
           G CSC DYW
Sbjct: 540 GHCSCEDYW 548



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 161/324 (49%), Gaps = 24/324 (7%)

Query: 212 SYLLQQILAMVKKAGLLSD------------LYVGSALVSGFARLGNFYYARKIFEQMIQ 259
            Y+  ++L M  K G++ D            L   + ++SG   +G+F  A ++F  M +
Sbjct: 10  QYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMWE 69

Query: 260 K----------NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
           +           ++  +  +E    G+++H   ++ G+ D + V   L++MY+KCG+I+D
Sbjct: 70  EFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIED 129

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +R VF  M  K +V WNT+I+G   +G  EEA+  +  MR  G+   +F+    +  CA 
Sbjct: 130 ARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICAR 189

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           L  +   +Q H   ++ G  SD+  + AL+  Y+  G +     VF  M   + +SWN++
Sbjct: 190 LASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNAL 249

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           IG + +     SEAV+ +  M +   +PN +TF+ +L+A S   + + G ++   + + N
Sbjct: 250 IGGYGN-HGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMGRDN 308

Query: 490 VANETTIENA-LLSCYGKCGEMDD 512
                 +  A ++   G+ G +D+
Sbjct: 309 RIKPRAMHYACMIELMGREGLLDE 332



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 135/261 (51%), Gaps = 9/261 (3%)

Query: 11  ILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEA 70
           ++ +GF +D ++ N ++ ++V+ G +  A +LFDEMP+RN VSW  I+SG    G   EA
Sbjct: 1   MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60

Query: 71  CKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLI 130
            ++F  M         +    ++RA    G      G Q+H   LK     D  VS  LI
Sbjct: 61  FRLFLNMWEEFSDAGSFTFAVMIRA--SAGLELISIGRQLHACTLKMGIGDDIFVSCALI 118

Query: 131 AMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSL 190
            MY  C  S + AR +FEE+  +  + WN+II+ Y+  G +     ++  M+  G    +
Sbjct: 119 DMYSKC-GSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSG----V 173

Query: 191 KPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
           K + +TF S+I    + + S  +  Q   A+++  G  SD+   +ALV  +++ G    A
Sbjct: 174 KMDHFTF-SMIVRICARLASVEHAKQAHAALIRH-GFGSDIVANTALVDFYSKWGRIEDA 231

Query: 251 RKIFEQMIQKNVVSMNGLMEG 271
           R +F++M  KNV+S N L+ G
Sbjct: 232 RHVFDKMASKNVISWNALIGG 252



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 7/207 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            +  H   LK G   D+F+   LI++Y + G +  A  +F+EMP++ +V W  I++GY  
Sbjct: 95  GRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYAL 154

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G S EA  M+ EM  +G  ++ +    ++R C     +  +   Q H  +++     D 
Sbjct: 155 HGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARL--ASVEHAKQAHAALIRHGFGSDI 212

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
           + +  L+  Y       D AR +F+++ ++++ISWN++I  Y   G      +LF +M +
Sbjct: 213 VANTALVDFYSKWGRIED-ARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQ 271

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLS 210
           E     + PN  TF ++++A   S LS
Sbjct: 272 E----RMNPNHITFLAVLSACSHSGLS 294


>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/484 (43%), Positives = 297/484 (61%), Gaps = 10/484 (2%)

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
           +P    + ++L +  +    K G Q+HAQV       +T I   L++ Y  C  +     
Sbjct: 72  TPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARL 131

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F R+  + +   WN +I GY  N     A+ L + M   G   D+FTF  VL ACA+++
Sbjct: 132 LFDRIP-KHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN---VYSWNS 632
            +E G E+H   V+   E DV +G+AL+DMY+KCG +  A   FD + VR+   V SWN+
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNA 250

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           MI+GYA HGH  +AL LF +M      PDH+TFVGVLSACSH GL++EG+  F++M + Y
Sbjct: 251 MITGYAMHGHATEALDLFEEMNRVAK-PDHITFVGVLSACSHGGLLEEGWMFFETMIRDY 309

Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELG 751
            + P ++ ++CMVDLLG +G LD+    I +M + P+S +W  +L +C   AN    ELG
Sbjct: 310 KIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHAN---VELG 366

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
             A   L E+EP +A NYV+L+N+YA  GKWE VAK RK M +  +KK   CSW+ +K+ 
Sbjct: 367 EIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNK 426

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
           VH F++GD SHP  D IY +L+ +   M++AGY P T     D+E + K ++V  HSE++
Sbjct: 427 VHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERL 486

Query: 872 AVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
           A+AF +++      + I KNLR+C DCH A KFISKI  REI +RD NR+HHF DG CSC
Sbjct: 487 AIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSC 546

Query: 931 GDYW 934
           GDYW
Sbjct: 547 GDYW 550



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 130/267 (48%), Gaps = 8/267 (2%)

Query: 273 RKGKEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
           + GK++H  +  +G  FD V +   LVN+Y  C ++  +R +F  +   +   WN +I G
Sbjct: 92  KPGKQLHAQVCLAGFGFDTV-IATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRG 150

Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
              NG YE A+  +  M   GL+  NF+    L +CA+L  I  G++IH   ++ G + D
Sbjct: 151 YAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKD 210

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ---VSWNSVIGAFADSEALVSEAVKYYL 448
           V V  AL+ +YA  G +    +VF  +   D    VSWN++I  +A      +EA+  + 
Sbjct: 211 VFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYA-MHGHATEALDLFE 269

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKC 507
           +M R    P+ +TF+ +L+A S   + + G      +I+ Y +         ++   G  
Sbjct: 270 EMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHS 328

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMIS 534
           G +D+   +  +M    D   W ++++
Sbjct: 329 GRLDEAYNLIMQMKVLPDSGVWGALLN 355



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 146/309 (47%), Gaps = 13/309 (4%)

Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
           SN++  S L SC +   I  G+Q+H +    G   D  ++  L++LY     LS    +F
Sbjct: 76  SNYA--SLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLF 133

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
             +P+H+   WN +I  +A        AV+ Y  M   G  P+  TF  +L A ++ S  
Sbjct: 134 DRIPKHNIFLWNVLIRGYA-WNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD--EVSWNSMI 533
           + G ++H  V++     +  +  AL+  Y KCG +    ++F ++  R     VSWN+MI
Sbjct: 193 EHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMI 252

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
           +GY  +    +A++L +  M R  + DH TF  VLSAC+    LE G       +R   +
Sbjct: 253 TGYAMHGHATEALDL-FEEMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRD-YK 310

Query: 594 FDVVIG--SALVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSMISGYARHGH---GDKAL 647
            D  +   + +VD+    GR+D A      M V  +   W ++++    H +   G+ AL
Sbjct: 311 IDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIAL 370

Query: 648 TLFSQMKLD 656
               +++ D
Sbjct: 371 ERLIELEPD 379



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 11/205 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H Q+   GF +D  +   L+N+Y     L+SA  LFD +P  N   W  ++ GY
Sbjct: 92  KPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGY 151

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G    A +++ +M   G + + +    VL+AC     S  + G ++H  V+++    
Sbjct: 152 AWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAAL--SAIEHGREIHEHVVQTGWEK 209

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRD---LISWNSIISVYSQRGDTISVFKLF 178
           D  V   LI MY  C      AR +F++I  RD   ++SWN++I+ Y+  G       LF
Sbjct: 210 DVFVGAALIDMYAKC-GCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLF 268

Query: 179 SRMQREGFRYSLKPNEYTFGSLITA 203
             M R       KP+  TF  +++A
Sbjct: 269 EEMNRVA-----KPDHITFVGVLSA 288



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 189/407 (46%), Gaps = 61/407 (14%)

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
            S+L++C        K G Q+H  V  +   FD +++  L+ +Y  C +S   AR +F+ 
Sbjct: 79  ASLLQSC--IARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVC-DSLSSARLLFDR 135

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA--AYSS 207
           I   ++  WN +I  Y+  G   +  +L+ +M    F Y L P+ +TF  ++ A  A S+
Sbjct: 136 IPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQM----FDYGLVPDNFTFPFVLKACAALSA 191

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN---VVS 264
           +  G    ++I   V + G   D++VG+AL+  +A+ G    AR++F++++ ++   VVS
Sbjct: 192 IEHG----REIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVS 247

Query: 265 MNGLMEGRRKGKEVHGYLIRS-GLF-DMVAVGN-------GLVNMYAKCGTIDDSRSVFR 315
            N ++     G  +HG+   +  LF +M  V         G+++  +  G +++    F 
Sbjct: 248 WNAMI----TGYAMHGHATEALDLFEEMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFE 303

Query: 316 FMIGKDSVS-----WNTMISGLDQNGCYEEA---IMNFCAMRRDGLMSSNFSLISTLSSC 367
            MI    +      +  M+  L  +G  +EA   IM    +   G+        + L+SC
Sbjct: 304 TMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWG------ALLNSC 357

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLKVFFLMPEHD---- 422
                + LG +I  E L + L+ D + +  +LS +YA AG      K+  LM +      
Sbjct: 358 KIHANVELG-EIALERL-IELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKS 415

Query: 423 -QVSWNSV---IGAF--ADSEALVSEAVKYYLD-----MRRAGWSPN 458
              SW  V   + AF   D+   +S+ +   L+     M+ AG+SP+
Sbjct: 416 IACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPS 462


>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 226/589 (38%), Positives = 322/589 (54%), Gaps = 40/589 (6%)

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           QIH    + GLD    ++  L   YA  G L   + +F          W ++I   A   
Sbjct: 48  QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHA-LR 106

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
            L  +A+ +Y  M   G  PN  TF +IL         + G  +H+Q +K    ++  + 
Sbjct: 107 GLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPI----EPGKALHSQAVKLGFDSDLYVR 162

Query: 498 N-------------------------------ALLSCYGKCGEMDDCEKIFARMSERRDE 526
                                           A+L+CY K GE+D    +F  M E RD 
Sbjct: 163 TGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGM-EERDG 221

Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
           V WN MI GY  N +  +A+ L   M++   + +  T  +VLSAC  +  LE G  VH+ 
Sbjct: 222 VCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSY 281

Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
                ++F+V +G+ALVDMYSKCG ++ A   FD +  ++V +WNSMI GYA HG   +A
Sbjct: 282 IENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEA 341

Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVD 706
           L LF  M   G  P ++TF+G+LSAC H+G V EG+  F  M   YG+ P++E + CMV+
Sbjct: 342 LQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVN 401

Query: 707 LLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
           LLGRAG +++  E +  M I P+ ++W T+LGAC      K  LG K   +L +    N+
Sbjct: 402 LLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHG--KIALGEKIVELLVDQNLANS 459

Query: 767 VNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKD 826
             Y+LL+N+YA+ G W+ VA+ R  MK++ VKKE GCS + + + VH F+AG  +HP++ 
Sbjct: 460 GTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRK 519

Query: 827 LIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPI 885
            IY  L+E+N  ++  GY PQT   L D+    KE  +  HSEK+A+AF ++       I
Sbjct: 520 EIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTI 579

Query: 886 RIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           +I+KNLRVC DCH   K ISKI GR+IV+RD NRFHHF +G CSCGDYW
Sbjct: 580 KIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 196/428 (45%), Gaps = 44/428 (10%)

Query: 108 MQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQ 167
           +Q+H ++ +       +++  L   Y S L   D +  +F   +   +  W +II  ++ 
Sbjct: 47  LQIHAVLFRHGLDHHPILNFKLQRSYAS-LGRLDYSVALFGRTQNPSVFFWTAIIHGHAL 105

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
           RG        +++M  +G    ++PN +TF S++      +  G  L  Q +    K G 
Sbjct: 106 RGLHEQALNFYAQMLTQG----VEPNAFTFSSILKLC--PIEPGKALHSQAV----KLGF 155

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGL 287
            SDLYV + L+  +AR G+   A+++F+ M +K++VS+  ++                  
Sbjct: 156 DSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAML------------------ 197

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
                        YAK G +D +R +F  M  +D V WN MI G  QNG   EA++ F  
Sbjct: 198 -----------TCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 246

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M +     +  +++S LS+C  LG +  G+ +H      G+  +V V  AL+ +Y+  G 
Sbjct: 247 MLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGS 306

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           L     VF  + + D V+WNS+I  +A       EA++ +  M R G  P  +TFI IL+
Sbjct: 307 LEDARLVFDKIDDKDVVAWNSMIVGYA-MHGFSQEALQLFKSMCRMGLHPTNITFIGILS 365

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFARMSERRD 525
           A         G  +  + +K     E  IE+   +++  G+ G ++   ++   M+   D
Sbjct: 366 ACGHSGWVTEGWDIFNK-MKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPD 424

Query: 526 EVSWNSMI 533
            V W +++
Sbjct: 425 PVLWGTLL 432



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 213/474 (44%), Gaps = 55/474 (11%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  + +HG  +   L   L   Y  +G L  +  LF    + +   W  I+ G+  +G+
Sbjct: 49  IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGL 108

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             +A   + +M+  G   N +   S+L+ C        + G  +H   +K     D  V 
Sbjct: 109 HEQALNFYAQMLTQGVEPNAFTFSSILKLCP------IEPGKALHSQAVKLGFDSDLYVR 162

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ-REG 185
             L+ +Y    +    A+++F+ +  + L+S  ++++ Y++ G+  +   LF  M+ R+G
Sbjct: 163 TGLLDVYARGGDVVS-AQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDG 221

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
             +++  + YT   +   A         L +++L    K   ++ L              
Sbjct: 222 VCWNVMIDGYTQNGMPNEAL-------VLFRRMLKAKAKPNEVTVL-------------- 260

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
                          +V+S  G +     G+ VH Y+  +G+   V VG  LV+MY+KCG
Sbjct: 261 ---------------SVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCG 305

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
           +++D+R VF  +  KD V+WN+MI G   +G  +EA+  F +M R GL  +N + I  LS
Sbjct: 306 SLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILS 365

Query: 366 SCASLGWIMLGQQIHGE-GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQ 423
           +C   GW+  G  I  +   + G++  +     +++L   AG++ +  ++   M  E D 
Sbjct: 366 ACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDP 425

Query: 424 VSWNSVIGA--FADSEALVSEAVKYYLDMRRAGWSPNGVTFI---NILAAASSF 472
           V W +++GA       AL  + V+  +D   A    N  T+I   NI AA  ++
Sbjct: 426 VLWGTLLGACRLHGKIALGEKIVELLVDQNLA----NSGTYILLSNIYAAVGNW 475



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/438 (24%), Positives = 181/438 (41%), Gaps = 70/438 (15%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           ++H  L R GL     +   L   YA  G +D S ++F          W  +I G    G
Sbjct: 48  QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
            +E+A+  +  M   G+  + F+  S L  C     I  G+ +H + +KLG DSD+ V  
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRT 163

Query: 397 ALLSLYADAGYLSRCLKVFFLMP-------------------------------EHDQVS 425
            LL +YA  G +    ++F  MP                               E D V 
Sbjct: 164 GLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 223

Query: 426 WNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV 485
           WN +I  +  +  + +EA+  +  M +A   PN VT +++L+A       + G  VH+ +
Sbjct: 224 WNVMIDGYTQN-GMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYI 282

Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
               +     +  AL+  Y KCG ++D   +F ++ + +D V+WNSMI GY  +    +A
Sbjct: 283 ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDD-KDVVAWNSMIVGYAMHGFSQEA 341

Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
           + L   M + G    + TF  +LSAC     +  G +               I + + D 
Sbjct: 342 LQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWD---------------IFNKMKDE 386

Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
           Y    +I++               +  M++   R GH ++A  L   M ++   PD V +
Sbjct: 387 YGIEPKIEH---------------YGCMVNLLGRAGHVEQAYELVKNMNIE---PDPVLW 428

Query: 666 VGVLSACSHAGLVDEGFK 683
             +L AC   G +  G K
Sbjct: 429 GTLLGACRLHGKIALGEK 446



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 155/346 (44%), Gaps = 49/346 (14%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD------------- 48
           +  K  H Q +K GF  D+++   L++VY R GD+ SA +LFD MP+             
Sbjct: 141 EPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCY 200

Query: 49  ------------------RNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
                             R+ V W  ++ GYT  GM NEA  +F+ M++A    N   + 
Sbjct: 201 AKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVL 260

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           SVL AC + G    + G  VH  +  +   F+  V   L+ MY  C  S + AR +F++I
Sbjct: 261 SVLSACGQLG--ALESGRWVHSYIENNGIQFNVHVGTALVDMYSKC-GSLEDARLVFDKI 317

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS--V 208
           + +D+++WNS+I  Y+  G +    +LF  M R G    L P   TF  +++A   S  V
Sbjct: 318 DDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMG----LHPTNITFIGILSACGHSGWV 373

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNVVSMNG 267
             G  +  +   M  + G+   +     +V+   R G+   A ++ + M I+ + V    
Sbjct: 374 TEGWDIFNK---MKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGT 430

Query: 268 LMEG-RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTID 308
           L+   R  GK   G  I   L D     +G    L N+YA  G  D
Sbjct: 431 LLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWD 476



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 104/224 (46%), Gaps = 13/224 (5%)

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
           T+   +++HA   R  L+   ++   L   Y+  GR+DY+   F      +V+ W ++I 
Sbjct: 42  TISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIH 101

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
           G+A  G  ++AL  ++QM   G  P+  TF  +L  C     ++ G K   S +   G  
Sbjct: 102 GHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPG-KALHSQAVKLGFD 156

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
             L   + ++D+  R G++   ++  + MP    SL+  T +  C     +  EL   AA
Sbjct: 157 SDLYVRTGLLDVYARGGDVVSAQQLFDTMP--EKSLVSLTAMLTCY---AKHGEL--DAA 209

Query: 756 NMLFE-MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVK 798
            +LF+ ME ++ V + ++ + Y   G   +     + M +A+ K
Sbjct: 210 RVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAK 253


>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g16835, mitochondrial; AltName: Full=Protein DYW10;
           Flags: Precursor
 gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 656

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 243/663 (36%), Positives = 371/663 (55%), Gaps = 66/663 (9%)

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC-YE 339
           YL +    D +   N ++    + G ID +  VF  M  K++++WN+++ G+ ++     
Sbjct: 51  YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMM 110

Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD----SDVSVS 395
           EA   F  +      S N  L     SC         + ++ E  +   D     D +  
Sbjct: 111 EAHQLFDEIPEPDTFSYNIML-----SCYV-------RNVNFEKAQSFFDRMPFKDAASW 158

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           N +++ YA  G + +  ++F+ M E ++VSWN++I  + +                    
Sbjct: 159 NTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIEC------------------- 199

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
                     L  AS F              K           A+++ Y K  +++  E 
Sbjct: 200 --------GDLEKASHF-------------FKVAPVRGVVAWTAMITGYMKAKKVELAEA 238

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F  M+  ++ V+WN+MISGY+ N      + L   M++ G R +    ++ L  C+ ++
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
            L+ G ++H    ++ L  DV   ++L+ MY KCG +  A + F++M  ++V +WN+MIS
Sbjct: 299 ALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMIS 358

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
           GYA+HG+ DKAL LF +M  +   PD +TFV VL AC+HAGLV+ G  +F+SM + Y + 
Sbjct: 359 GYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE 418

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           PQ + ++CMVDLLGRAG+L++  + I  MP  P++ ++ T+LGA CR + +  EL   AA
Sbjct: 419 PQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGA-CRVH-KNVELAEFAA 476

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
             L ++  QNA  YV LAN+YAS  +WEDVA+ RK MKE+ V K  G SW+ +++ VH F
Sbjct: 477 EKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHF 536

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
            + D  HPE D I++KLKEL +KM+ AGY P+ +FAL ++E E KE L+ +HSEK+AVAF
Sbjct: 537 RSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAF 596

Query: 876 VLTRNSKLP----IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
                 KLP    I++ KNLR+CGDCH A KFIS+I  REI++RD+ RFHHF DG CSCG
Sbjct: 597 GCI---KLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCG 653

Query: 932 DYW 934
           DYW
Sbjct: 654 DYW 656



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 192/403 (47%), Gaps = 24/403 (5%)

Query: 129 LIAMYGSCLESTDC--ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR--E 184
           L  +   C+ S D   A R+F  +  ++ I+WNS++         I + K  SRM    +
Sbjct: 64  LNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLL---------IGISKDPSRMMEAHQ 114

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
            F    +P+ +++  +++    +V       ++  +   +     D    + +++G+AR 
Sbjct: 115 LFDEIPEPDTFSYNIMLSCYVRNVN-----FEKAQSFFDRMPF-KDAASWNTMITGYARR 168

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVH--GYLIRSGLFDMVAVGNGLVNMYA 302
           G    AR++F  M++KN VS N ++ G  +  ++    +  +      V     ++  Y 
Sbjct: 169 GEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYM 228

Query: 303 KCGTIDDSRSVFRFM-IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
           K   ++ + ++F+ M + K+ V+WN MISG  +N   E+ +  F AM  +G+  ++  L 
Sbjct: 229 KAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLS 288

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S L  C+ L  + LG+QIH    K  L +DV+   +L+S+Y   G L    K+F +M + 
Sbjct: 289 SALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK 348

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D V+WN++I  +A       +A+  + +M      P+ +TF+ +L A +   +  +G   
Sbjct: 349 DVVAWNAMISGYA-QHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAY 407

Query: 482 HAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
              +++ Y V  +      ++   G+ G++++  K+   M  R
Sbjct: 408 FESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR 450



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 96/426 (22%), Positives = 180/426 (42%), Gaps = 64/426 (15%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH-KGMSNEACKMFKEMV 78
           +F  N +I   VR GD+  A ++F  M  +N+++W  ++ G +       EA ++F E+ 
Sbjct: 61  IFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP 120

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN----QTF-------DGLVSN 127
                                 P  F + + + C V   N    Q+F       D    N
Sbjct: 121 E---------------------PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWN 159

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            +I  Y    E  + AR +F  +  ++ +SWN++IS Y + GD       F      G  
Sbjct: 160 TMITGYARRGE-MEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG-- 216

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQI---LAMVKKAGLLSDLYVGSALVSGFARL 244
                           A++++++G    +++    AM K   +  +L   +A++SG+   
Sbjct: 217 --------------VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVEN 262

Query: 245 GNFYYARKIFEQMIQKNV-VSMNGL---------MEGRRKGKEVHGYLIRSGLFDMVAVG 294
                  K+F  M+++ +  + +GL         +   + G+++H  + +S L + V   
Sbjct: 263 SRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTAL 322

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
             L++MY KCG + D+  +F  M  KD V+WN MISG  Q+G  ++A+  F  M  + + 
Sbjct: 323 TSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIR 382

Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSLYADAGYLSRCLK 413
               + ++ L +C   G + +G       ++   ++        ++ L   AG L   LK
Sbjct: 383 PDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALK 442

Query: 414 VFFLMP 419
           +   MP
Sbjct: 443 LIRSMP 448



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 145/338 (42%), Gaps = 51/338 (15%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D F  N +++ YVR  +   A   FD MP +++ SW  +++GY  +G   +A ++F  M+
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM 182

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
                 N  +  +++    ECG       ++      K       +    +I  Y    +
Sbjct: 183 EK----NEVSWNAMISGYIECG------DLEKASHFFKVAPVRGVVAWTAMITGYMKA-K 231

Query: 139 STDCARRIFEEIE-TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
             + A  +F+++   ++L++WN++IS Y +        KLF  M  EG R    PN    
Sbjct: 232 KVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR----PNSSGL 287

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            S +     S LS   L +QI  +V K+ L +D+   ++L+S + + G    A K+FE M
Sbjct: 288 SSALLGC--SELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM 345

Query: 258 IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
            +K+VV+ N ++ G                             YA+ G  D +  +FR M
Sbjct: 346 KKKDVVAWNAMISG-----------------------------YAQHGNADKALCLFREM 376

Query: 318 I-GKDSVSWNTMISGL---DQNGCYEEAIMNFCAMRRD 351
           I  K    W T ++ L   +  G     +  F +M RD
Sbjct: 377 IDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRD 414



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 50/96 (52%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H  + K     DV    +LI++Y + G+L  A KLF+ M  ++ V+W  ++SGY   
Sbjct: 304 RQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQH 363

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           G +++A  +F+EM+      +     +VL AC   G
Sbjct: 364 GNADKALCLFREMIDNKIRPDWITFVAVLLACNHAG 399


>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
 gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/726 (31%), Positives = 374/726 (51%), Gaps = 85/726 (11%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           + G EVHG +++ G     ++ N L+ +Y+KCG + +   +F  M  +D +SWNTMIS  
Sbjct: 150 KLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCY 209

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH------------ 380
              G Y EA+  F  M   G++    +++S +S+CA L  + +G+++H            
Sbjct: 210 VLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRG 269

Query: 381 ------------------GEGLKLGLDS---DVSVSNALLSLYADAGYLSRCLKVFFLMP 419
                               GL    D    DV +   L+S Y  +  + +  ++F  M 
Sbjct: 270 SLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMN 329

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
           E   VSW +++  +        E+++ +  MR     P+ V  + +L+A        LG 
Sbjct: 330 ERSLVSWTTMMSGYVQG-GYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGR 388

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS------------------ 521
            VHA ++ Y +  +  + NALL  Y KCG++D+  + F ++                   
Sbjct: 389 SVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSG 448

Query: 522 ------------ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
                         +D VSWN+M++ Y+ ++L  ++  +   M     + D  T  ++LS
Sbjct: 449 GVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLS 508

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
           +CA V  L  G+ V+    +  +  D ++G+AL+DMY KCG ++ A   F  +  +NV+ 
Sbjct: 509 SCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFV 568

Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
           W +M++ YA  G   +A+ L+ +M+  G  PDHVTF+ +L+ACSH GLVDEG+K+F  + 
Sbjct: 569 WTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLR 628

Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
             Y +IP +  + CMVDLLGR G L++  +FI +MPI P+  IW +++ A CR++    E
Sbjct: 629 SFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRA-CRSH-HNVE 686

Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMK 809
           L  +A   L E++P N   +VLL+N+YA  G+W+DV+K R  + E  V K+ G + +   
Sbjct: 687 LAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQN 746

Query: 810 DGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSE 869
             VH FVA +    +   I   L+++ +++               L  +   D  S HSE
Sbjct: 747 GVVHEFVASNLVSAD---ILCMLQDIERRL---------------LVKQELSDTTSQHSE 788

Query: 870 KIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKC 928
           ++AVAF L  N +  PIR++ ++R+C DCHS  K IS+   REIV+RD+ RFH F DG C
Sbjct: 789 RLAVAFGLINNQENSPIRVVNSVRMCRDCHSVMKLISQAYDREIVIRDNYRFHRFTDGHC 848

Query: 929 SCGDYW 934
           SC DYW
Sbjct: 849 SCKDYW 854



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 172/685 (25%), Positives = 309/685 (45%), Gaps = 81/685 (11%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  ++     +D  + + ++   + V +L  A ++     +  S+ W  ++     +G 
Sbjct: 54  IHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGC 113

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             E  + +  MV  G LL+      ++ AC  C     K G +VH  +LK     +  ++
Sbjct: 114 PQEVLECYYHMVTQGVLLDISTFHFLIHAC--CKNFDVKLGSEVHGRILKCGFGRNKSLN 171

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N L+ +Y  C +  +  + +FE++  RD+ISWN++IS Y  +G       LF  M   G 
Sbjct: 172 NNLMGLYSKCGKLKEVCQ-LFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSG- 229

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              + P+E T  SL++                         L DL +G        RL  
Sbjct: 230 ---VLPDEITMVSLVSTC---------------------AKLKDLEMGK-------RLHL 258

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRK-GK--EVHGYLIRSGLFDM-VAVGNGLVNMYA 302
           +    K++   I+ ++  +N L++   K GK  E HG L R    ++ V +   LV+ Y 
Sbjct: 259 YIVDNKLW---IRGSL--LNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYV 313

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIS 362
           K   ID +R +F  M  +  VSW TM+SG  Q G Y E++  F  MR + ++    +L++
Sbjct: 314 KSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVT 373

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF------- 415
            LS+C  L    LG+ +H   +  G+  D  + NALL LYA  G L   L+ F       
Sbjct: 374 VLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKS 433

Query: 416 ----------------------FL--MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
                                 F   +PE D VSWN+++ A+   + L +E+ + +  M+
Sbjct: 434 AASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHD-LFNESFEIFCKMQ 492

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
            +   P+  T I++L++ +       G  V+  + K  +  +  +  AL+  YGKCG ++
Sbjct: 493 SSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVE 552

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
              +IF ++ E+   V W +M++ Y       +A++L   M +RG + DH TF  +L+AC
Sbjct: 553 MAYEIFTQIIEKNVFV-WTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAAC 611

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIG--SALVDMYSKCGRIDYASRFFDLMPVR-NVY 628
           +    ++ G + +   +R+       I     +VD+  + G ++   +F + MP+  +V 
Sbjct: 612 SHGGLVDEGYK-YFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVS 670

Query: 629 SWNSMISGYARHGHGDKALTLFSQM 653
            W+S++     H + + A   F Q+
Sbjct: 671 IWSSLMRACRSHHNVELAEQAFKQL 695



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 148/569 (26%), Positives = 265/569 (46%), Gaps = 78/569 (13%)

Query: 3   DAKL---FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           D KL    H +ILK GF  +  L N L+ +Y + G L    +LF++M  R+ +SW  ++S
Sbjct: 148 DVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMIS 207

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
            Y  KGM  EA  +F EM+ +G L +   + S++  C +      + G ++H  ++ +  
Sbjct: 208 CYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKL--KDLEMGKRLHLYIVDNKL 265

Query: 120 TFDGLVSNVLIAMYGSC---------------------LEST-----------DCARRIF 147
              G + N L+ MY  C                     L +T           D AR++F
Sbjct: 266 WIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLF 325

Query: 148 EEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS 207
           +++  R L+SW +++S Y Q G      +LF +M+ E    ++ P+E    ++++A    
Sbjct: 326 DKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFE----NVIPDEVALVTVLSACVH- 380

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
            L    L + + A +   G+L D ++G+AL+  +A+ G    A + FEQ+  K+  S N 
Sbjct: 381 -LEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNS 439

Query: 268 LMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
           +++G                             + + G +D +R  F  +  KD VSWNT
Sbjct: 440 MLDG-----------------------------FCRSGGVDKARDFFNKIPEKDIVSWNT 470

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG--QQIHGEGLK 385
           M++   ++  + E+   FC M+   +     +LIS LSSCA +G +  G    ++ E  +
Sbjct: 471 MVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNE 530

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
           +G+D+   +  AL+ +Y   G +    ++F  + E +   W +++ A+A  E    EA+ 
Sbjct: 531 IGIDA--MLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYA-MEGQALEAID 587

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCY 504
            YL+M   G  P+ VTFI +LAA S   +   G++   ++   YN+         ++   
Sbjct: 588 LYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLL 647

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           G+ G +++  K   RM    D   W+S++
Sbjct: 648 GRVGHLEETVKFIERMPIEPDVSIWSSLM 676



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 125/531 (23%), Positives = 240/531 (45%), Gaps = 68/531 (12%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R+   +H +LI + L     + + ++        +D +  +  +    +S+ WNT++   
Sbjct: 49  REFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENK 108

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            + GC +E +  +  M   G++    +    + +C     + LG ++HG  LK G   + 
Sbjct: 109 LKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNK 168

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
           S++N L+ LY+  G L    ++F  M   D +SWN++I  +   + +  EA+  + +M  
Sbjct: 169 SLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYV-LKGMYREALDLFDEMLV 227

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           +G  P+ +T +++++  +     ++G ++H  ++   +    ++ N L+  Y KCG+MD+
Sbjct: 228 SGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDE 287

Query: 513 CEKIFARMSERR-DEVSWNSMISGYIHNELLPKAMNLV----------WFMMQRG----- 556
              + +R  E   D V W +++SGY+ +  + KA  L           W  M  G     
Sbjct: 288 AHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGG 347

Query: 557 ---------QRL-------DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
                    Q++       D     TVLSAC  +   + G  VHA  V   +  D  +G+
Sbjct: 348 YYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGN 407

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA-------------- 646
           AL+D+Y+KCG++D A R F+ +P ++  SWNSM+ G+ R G  DKA              
Sbjct: 408 ALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVS 467

Query: 647 -----------------LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG-FKHFKSM 688
                              +F +M+     PD  T + +LS+C+  G ++ G + +    
Sbjct: 468 WNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIE 527

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
               G+   L   + ++D+ G+ G ++   E   ++ I  N  +W  ++ A
Sbjct: 528 KNEIGIDAMLG--TALIDMYGKCGCVEMAYEIFTQI-IEKNVFVWTAMMAA 575



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 152/304 (50%), Gaps = 10/304 (3%)

Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
           +HA +I  N+ ++  I + +L+       +D   +I +  S   + + WN+++   +   
Sbjct: 54  IHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILS-YSHEPESIIWNTLLENKLKEG 112

Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
              + +   + M+ +G  LD  TF  ++ AC     ++ G EVH   ++     +  + +
Sbjct: 113 CPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNN 172

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
            L+ +YSKCG++    + F+ M  R+V SWN+MIS Y   G   +AL LF +M + G LP
Sbjct: 173 NLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLP 232

Query: 661 DHVTFVGVLSACSHAGLVDEGFK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
           D +T V ++S C+    ++ G + H   +     +   L   +C+VD+  + G++D+   
Sbjct: 233 DEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSL--LNCLVDMYSKCGKMDEAHG 290

Query: 720 FINKMPITP-NSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYAS 778
            +++   +  + ++W T++    ++N  K +   KA  +  +M  ++ V++  + + Y  
Sbjct: 291 LLSRCDESEVDVVLWTTLVSGYVKSN--KID---KARQLFDKMNERSLVSWTTMMSGYVQ 345

Query: 779 GGKW 782
           GG +
Sbjct: 346 GGYY 349


>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 231/671 (34%), Positives = 372/671 (55%), Gaps = 71/671 (10%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG 275
           ++I A + K    S++++ + LV  + + G F  ARK+F++M Q+N  S N ++      
Sbjct: 39  RRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVL------ 92

Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
                                  ++  K G +D++ +VF+ M   D  SWN M+SG  Q+
Sbjct: 93  -----------------------SVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQH 129

Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
             +EEA+  F  M  +  + + +S  S LS+CA L  + +G QIH    K     DV + 
Sbjct: 130 DRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMG 189

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           +AL+ +Y+  G ++   + F  M   + VSWNS+I  + +      +A++ ++ M   G 
Sbjct: 190 SALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCY-EQNGPAGKALEVFVMMMDNGV 248

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN-VANETTIENALLSCYGKCGEMDDCE 514
            P+ +T  ++++A +S+S  + G Q+HA+V+K +   N+  + NAL+  Y KC  +++  
Sbjct: 249 EPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEAR 308

Query: 515 KIFARMSER------------------------------RDEVSWNSMISGYIHNELLPK 544
            +F RM  R                              ++ VSWN++I+GY  N    +
Sbjct: 309 LVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEE 368

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF------DVVI 598
           A+ L   + +      H+TF  +L+ACA++A L+ G + H   ++    F      D+ +
Sbjct: 369 AVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFV 428

Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
           G++L+DMY KCG ++     F+ M  R+V SWN+MI GYA++G+G  AL +F +M + G 
Sbjct: 429 GNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQ 488

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
            PDHVT +GVLSACSHAGLV+EG ++F SM    GL P  + F+CMVDLLGRAG LD+  
Sbjct: 489 KPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEAN 548

Query: 719 EFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYA 777
           + I  MP+ P++++W ++L AC    N    ELG+  A  L E++P N+  YVLL+NMYA
Sbjct: 549 DLIQTMPMQPDNVVWGSLLAACKVHGN---IELGKYVAEKLMEIDPLNSGPYVLLSNMYA 605

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
             G+W+DV + RK M++  V K+ GCSW+ ++  VHVF+  D+ HP K  I+  LK L +
Sbjct: 606 ELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTE 665

Query: 838 KMRDAGYVPQT 848
           +M+ AGYVP+ 
Sbjct: 666 QMKWAGYVPEA 676



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 162/573 (28%), Positives = 279/573 (48%), Gaps = 80/573 (13%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVS--------- 53
           DA+  H +I+K  F+ ++F+ N L++ Y + G    A K+FD MP RN+ S         
Sbjct: 37  DARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLT 96

Query: 54  ----------------------WACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGS 91
                                 W  +VSG+       EA + F +M    F+LN Y+ GS
Sbjct: 97  KFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGS 156

Query: 92  VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE 151
            L AC   G +    G+Q+H L+ KS    D  + + L+ MY  C     CA+R F+ + 
Sbjct: 157 ALSAC--AGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKC-GVVACAQRAFDGMA 213

Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT--AAYSSVL 209
            R+++SWNS+I+ Y Q G      ++F  M   G    ++P+E T  S+++  A++S++ 
Sbjct: 214 VRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNG----VEPDEITLASVVSACASWSAIR 269

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
            G   LQ    +VK+    +DL +G+ALV  +A+      AR +F++M  +NVVS   ++
Sbjct: 270 EG---LQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMV 326

Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
            G                             YA+  ++  +R +F  M+ K+ VSWN +I
Sbjct: 327 CG-----------------------------YARAASVKAARLMFSNMMEKNVVSWNALI 357

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL- 388
           +G  QNG  EEA+  F  ++R+ +  ++++  + L++CA+L  + LG+Q H + LK G  
Sbjct: 358 AGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFW 417

Query: 389 -----DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
                +SD+ V N+L+ +Y   G +     VF  M E D VSWN++I  +A +    + A
Sbjct: 418 FQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQN-GYGTNA 476

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLS 502
           ++ +  M  +G  P+ VT I +L+A S   + + G +  H+   +  +A        ++ 
Sbjct: 477 LEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVD 536

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             G+ G +D+   +   M  + D V W S+++ 
Sbjct: 537 LLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAA 569



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 184/385 (47%), Gaps = 67/385 (17%)

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
           L SS F+ +  L SC      +  ++IH   +K    S++ + N L+  Y   GY     
Sbjct: 17  LDSSPFAKL--LDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDAR 74

Query: 413 KVFFLMPEHDQV-------------------------------SWNSVIGAFADSEALVS 441
           KVF  MP+ +                                 SWN+++  FA  +    
Sbjct: 75  KVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRF-E 133

Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
           EA+++++DM    +  N  +F + L+A +  +   +G Q+HA + K     +  + +AL+
Sbjct: 134 EALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALV 193

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
             Y KCG +   ++ F  M+  R+ VSWNS+I+ Y  N    KA+ +   MM  G   D 
Sbjct: 194 DMYSKCGVVACAQRAFDGMA-VRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDE 252

Query: 562 FTFATVLSACASVATLERGMEVHACGV-RACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
            T A+V+SACAS + +  G+++HA  V R     D+V+G+ALVDMY+KC R++ A   FD
Sbjct: 253 ITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFD 312

Query: 621 LMPVR-------------------------------NVYSWNSMISGYARHGHGDKALTL 649
            MP+R                               NV SWN++I+GY ++G  ++A+ L
Sbjct: 313 RMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRL 372

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSH 674
           F  +K +   P H TF  +L+AC++
Sbjct: 373 FLLLKRESIWPTHYTFGNLLNACAN 397



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 170/357 (47%), Gaps = 38/357 (10%)

Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
           F  +L +      G    ++HA++IK   ++E  I+N L+  YGKCG  +D  K+F RM 
Sbjct: 22  FAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMP 81

Query: 522 ERR------------------------------DEVSWNSMISGYIHNELLPKAMNLVWF 551
           +R                               D+ SWN+M+SG+  ++   +A+     
Sbjct: 82  QRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVD 141

Query: 552 MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR 611
           M      L+ ++F + LSACA +  L  G+++HA   ++    DV +GSALVDMYSKCG 
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGV 201

Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
           +  A R FD M VRN+ SWNS+I+ Y ++G   KAL +F  M  +G  PD +T   V+SA
Sbjct: 202 VACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSA 261

Query: 672 CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
           C+    + EG +    + +       L   + +VD+  +   +++     ++MP+     
Sbjct: 262 CASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL----- 316

Query: 732 IWRTVLGACCRANCRKTELGRKAANMLF-EMEPQNAVNYVLLANMYASGGKWEDVAK 787
             R V+               KAA ++F  M  +N V++  L   Y   G+ E+  +
Sbjct: 317 --RNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVR 371



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 4/130 (3%)

Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRF 618
           LD   FA +L +C    +      +HA  ++     ++ I + LVD Y KCG  + A + 
Sbjct: 17  LDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKV 76

Query: 619 FDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLV 678
           FD MP RN +S+N+++S   + G  D+A  +F  M    P PD  ++  ++S  +     
Sbjct: 77  FDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSM----PEPDQCSWNAMVSGFAQHDRF 132

Query: 679 DEGFKHFKSM 688
           +E  + F  M
Sbjct: 133 EEALRFFVDM 142


>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
 gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/564 (40%), Positives = 331/564 (58%), Gaps = 5/564 (0%)

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
           + L  Q+H   +  G     S+   LL+L   AG +S   ++F  +P  D   + S+I +
Sbjct: 25  LYLLHQVHAHIIVSGYGRSRSLLTKLLNLACAAGSISYTRQIFLAVPNPDSFLFTSLIKS 84

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN 492
            + S      ++ +Y  M  +  SP+  TF +++ + +  S  K G  VH  V+ +    
Sbjct: 85  TSKSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGL 144

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
           +  ++ AL++ YGKCG++ +  K+F ++ ER   V+WNSMISGY  N    +A+ L   M
Sbjct: 145 DVYVQAALVALYGKCGDLINARKVFDKIRER-SIVAWNSMISGYEQNGFAKEAIGLFDRM 203

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRI 612
            + G   D  TF +VLSACA +     G  VH   V   L+ +VV+G++L++MY +CG +
Sbjct: 204 KETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNV 263

Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
             A   FD M  RNV +W +MISGY  +G+G +A+ LF +M+ +G  P+ +TFV VLSAC
Sbjct: 264 SKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSAC 323

Query: 673 SHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFIN-KMPITPNSL 731
           +HAGLV+EG + F S+ + Y L+P +E   C+VD+LGRAG LD+   FI  ++P  P   
Sbjct: 324 AHAGLVNEGRRLFASIREEYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENPAPA 383

Query: 732 IWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKA 791
           I   +LGAC     +  +LG + A  L   EP+N  +YV+L+N+YA  G+ + V   R  
Sbjct: 384 ILTAMLGAC--KMHKNFDLGAQVAEHLLAAEPENPAHYVILSNIYALAGRMDQVEIVRNN 441

Query: 792 MKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFA 851
           M    +KK+ G S V +    ++F  GD+SH E + IY  L EL  K  +AGYVP +   
Sbjct: 442 MIRKCLKKQVGYSTVEVDQKTYLFSMGDKSHSETNAIYHYLDELMWKCSEAGYVPVSDSV 501

Query: 852 LFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGR 910
           + +LE E +E  + YHSEK+A+AF L + S   PIRI+KNLR+C DCHSA KFIS I  R
Sbjct: 502 MHELEEEEREYALRYHSEKLAIAFGLLKTSHGTPIRIVKNLRMCEDCHSAIKFISAISSR 561

Query: 911 EIVLRDSNRFHHFNDGKCSCGDYW 934
           EI++RD  RFHHF  G CSC DYW
Sbjct: 562 EIIVRDKLRFHHFKVGSCSCLDYW 585



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 168/348 (48%), Gaps = 10/348 (2%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           +VH ++I SG     ++   L+N+    G+I  +R +F  +   DS  + ++I    ++ 
Sbjct: 30  QVHAHIIVSGYGRSRSLLTKLLNLACAAGSISYTRQIFLAVPNPDSFLFTSLIKSTSKSH 89

Query: 337 CYEEAIMNFCA-MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
            +    + F + M    +  SN++  S + SCA L  +  G+ +HG  L  G   DV V 
Sbjct: 90  NFSIYSLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQ 149

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
            AL++LY   G L    KVF  + E   V+WNS+I  + +      EA+  +  M+  G 
Sbjct: 150 AALVALYGKCGDLINARKVFDKIRERSIVAWNSMISGY-EQNGFAKEAIGLFDRMKETGV 208

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            P+  TF+++L+A +      LG  VH  ++   +     +  +L++ Y +CG +    +
Sbjct: 209 EPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKARE 268

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F  M E R+ V+W +MISGY  N    +A+ L   M + G   +  TF  VLSACA   
Sbjct: 269 VFDSMKE-RNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAG 327

Query: 576 TLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFF 619
            +  G  + A  +R   E+ +V G      LVDM  + G +D A  F 
Sbjct: 328 LVNEGRRLFA-SIRE--EYHLVPGVEHNVCLVDMLGRAGLLDEAYNFI 372



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 160/310 (51%), Gaps = 8/310 (2%)

Query: 210 SGSYLLQQILAMVKKAGLL-SDLYVGSALVSGFARLGNFYYARKIFEQMIQKN-----VV 263
           S SY  Q  LA+      L + L   ++    F+    ++Y+R +   +   N     V+
Sbjct: 59  SISYTRQIFLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVI 118

Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                +   + G+ VHG+++  G    V V   LV +Y KCG + ++R VF  +  +  V
Sbjct: 119 KSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKIRERSIV 178

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           +WN+MISG +QNG  +EAI  F  M+  G+   + + +S LS+CA LG   LG  +H   
Sbjct: 179 AWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYI 238

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
           +  GLD +V +  +L+++Y   G +S+  +VF  M E + V+W ++I  +  +    S+A
Sbjct: 239 VGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYG-TNGYGSQA 297

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLS 502
           V+ + +MRR G  PN +TF+ +L+A +   +   G ++ A +  +Y++         L+ 
Sbjct: 298 VELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCLVD 357

Query: 503 CYGKCGEMDD 512
             G+ G +D+
Sbjct: 358 MLGRAGLLDE 367



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 125/249 (50%), Gaps = 25/249 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  ++ H  +L HGF  DV++   L+ +Y + GDL +A K+FD++ +R+ V+W  ++SGY
Sbjct: 128 KHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKIRERSIVAWNSMISGY 187

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G + EA  +F  M   G   +     SVL AC   G   F  G  VH  ++ +    
Sbjct: 188 EQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLG--AFSLGCWVHEYIVGNGLDL 245

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           + ++   LI MY  C  +   AR +F+ ++ R++++W ++IS Y   G      +LF  M
Sbjct: 246 NVVLGTSLINMYIRC-GNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEM 304

Query: 182 QREGFRYSLKPNEYTFGSLITAA------------YSSVLSGSYLLQQI------LAMVK 223
           +R G    L PN  TF ++++A             ++S+    +L+  +      + M+ 
Sbjct: 305 RRNG----LFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCLVDMLG 360

Query: 224 KAGLLSDLY 232
           +AGLL + Y
Sbjct: 361 RAGLLDEAY 369



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 119/491 (24%), Positives = 221/491 (45%), Gaps = 67/491 (13%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIV-SGYTHKGM 66
           H  I+  G+     L   L+N+    G ++   ++F  +P+ +S  +  ++ S       
Sbjct: 32  HAHIIVSGYGRSRSLLTKLLNLACAAGSISYTRQIFLAVPNPDSFLFTSLIKSTSKSHNF 91

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           S  +   +  MV +    + Y   SV+++C +   S  K G  VH  VL      D  V 
Sbjct: 92  SIYSLYFYSRMVLSNVSPSNYTFTSVIKSCADL--SALKHGRVVHGHVLVHGFGLDVYVQ 149

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
             L+A+YG C +  + AR++F++I  R +++WNS+IS Y Q G       LF RM+  G 
Sbjct: 150 AALVALYGKCGDLIN-ARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETG- 207

Query: 187 RYSLKPNEYTFGSLITA-AYSSVLS-GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
              ++P+  TF S+++A A+    S G ++ + I+      GL  ++ +G++L++ + R 
Sbjct: 208 ---VEPDSATFVSVLSACAHLGAFSLGCWVHEYIVG----NGLDLNVVLGTSLINMYIRC 260

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGR------RKGKEVHGYLIRSGLFDMVAVGNGLV 298
           GN   AR++F+ M ++NVV+   ++ G        +  E+   + R+GLF        ++
Sbjct: 261 GNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVL 320

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
           +  A  G +++ R +F  +  +       ++ G++ N C  +       + R GL+   +
Sbjct: 321 SACAHAGLVNEGRRLFASIREE-----YHLVPGVEHNVCLVD------MLGRAGLLDEAY 369

Query: 359 SLI--------------STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           + I              + L +C       LG Q+  E L      + +    L ++YA 
Sbjct: 370 NFIKEEIPENPAPAILTAMLGACKMHKNFDLGAQV-AEHLLAAEPENPAHYVILSNIYAL 428

Query: 405 AG-----------YLSRCLK--VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD-- 449
           AG            + +CLK  V +   E DQ ++   +G  + SE   + A+ +YLD  
Sbjct: 429 AGRMDQVEIVRNNMIRKCLKKQVGYSTVEVDQKTYLFSMGDKSHSE---TNAIYHYLDEL 485

Query: 450 ---MRRAGWSP 457
                 AG+ P
Sbjct: 486 MWKCSEAGYVP 496


>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
          Length = 649

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 225/629 (35%), Positives = 345/629 (54%), Gaps = 37/629 (5%)

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
           E+A+  +  M   G M   ++    L + A        + +H   +K G+  +  V+ +L
Sbjct: 25  EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
           ++ YA  G  +    +         V WN++I           EA   ++DM RAG +P 
Sbjct: 85  VTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRF-GEACCSFVDMARAGAAPT 143

Query: 459 GVTFINILAAASSFSMGKL-GHQVHAQVIKYNVANETTIENALLSCYGKCGEM------- 510
            VT++++L+A    +   L G QVH +V+   V  +  +ENAL+  Y +C +M       
Sbjct: 144 PVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLF 203

Query: 511 ------------------------DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAM 546
                                   D+   +F RM ER D VSW +MI GY+      +A+
Sbjct: 204 DGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPER-DTVSWTAMIDGYVQAARFREAL 262

Query: 547 NLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMY 606
            +   M       D FT  +V++ACA +  LE G  V     R  ++ D  +G+AL+DMY
Sbjct: 263 EMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMY 322

Query: 607 SKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFV 666
           SKCG I+ A   F  M  R+ ++W ++I G A +G+G++A+ +F +M      PD VTF+
Sbjct: 323 SKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFI 382

Query: 667 GVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPI 726
           GVL+AC+HAGLVD+G + F SM + Y + P +  + C++DL GRAG++ +  + I++MP+
Sbjct: 383 GVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPM 442

Query: 727 TPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVA 786
           TPNS IW T+L A CR +   +E+G      L +M+P+N+  Y LL+N+YA   +WEDV 
Sbjct: 443 TPNSTIWGTLLAA-CRVHG-NSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVR 500

Query: 787 KARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVP 846
           + R  + E  +KKE GCS + M   +H FVAGD+SHP    IY KL+ +   + + GY P
Sbjct: 501 RLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESIINDLNNVGYFP 560

Query: 847 QTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFIS 905
                  ++  E K+ ++ +HSEK+A+AF +L+      IRI+KNLR+C DCH+A K IS
Sbjct: 561 DVTEVFVEVAEEEKQKVLFWHSEKLAIAFALLSSEPNTVIRIVKNLRMCLDCHNAIKLIS 620

Query: 906 KIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           ++ GRE+V+RD  RFHHF  G CSC DYW
Sbjct: 621 RLYGREVVVRDRTRFHHFRHGFCSCKDYW 649



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/467 (22%), Positives = 196/467 (41%), Gaps = 93/467 (19%)

Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
           ARR+ E I  R L++          R D ++ +   +RM   G      P+ YTF  L+ 
Sbjct: 8   ARRLLEGIPRRCLVA---------AREDAVAGY---ARMLARG----AMPDAYTFPPLLK 51

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
           A      S +  ++ + A V K G+  + +V ++LV+ +A  G+   AR +  +  +   
Sbjct: 52  AVARG--SSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTP 109

Query: 263 VSMNGLMEGRRK------------------------------------------GKEVHG 280
           V  N L+ G  +                                          G +VHG
Sbjct: 110 VVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHG 169

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKC-------------------------------GTIDD 309
            ++ SG+   + V N LV+MYA+C                               G +D+
Sbjct: 170 RVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDE 229

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +R +F  M  +D+VSW  MI G  Q   + EA+  F  M+   + +  F+++S +++CA 
Sbjct: 230 ARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQ 289

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           LG + +G+ +     + G+  D  V NAL+ +Y+  G + R L VF  M   D+ +W ++
Sbjct: 290 LGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAI 349

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-Y 488
           I   A       EA++ +  M     +P+ VTFI +L A +   +   G +    + + Y
Sbjct: 350 ILGLA-VNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETY 408

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           N+A        ++  +G+ G++ +      +M    +   W ++++ 
Sbjct: 409 NIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAA 455



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 140/325 (43%), Gaps = 15/325 (4%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
            +L++   R+G +  A  LF  MP+R++VSW  ++ GY       EA +MF+EM  +   
Sbjct: 215 TSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVS 274

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
            + + + SV+ AC + G    + G  V   + +     D  V N LI MY  C  S + A
Sbjct: 275 ADEFTMVSVITACAQLG--ALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKC-GSIERA 331

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
             +F+++  RD  +W +II   +  G      ++F RM       S  P+E TF  ++TA
Sbjct: 332 LDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRM----IGVSETPDEVTFIGVLTA 387

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
              + L      +  L+M +   +  ++     ++  F R G    A    +QM      
Sbjct: 388 CTHAGLVDKG-REFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNS 446

Query: 264 SMNG--LMEGRRKGKEVHGYLIRSGLFDM----VAVGNGLVNMYAKCGTIDDSRSVFRFM 317
           ++ G  L   R  G    G L+   L  M      V   L N+YAKC   +D R   R  
Sbjct: 447 TIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRR-LRHT 505

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAI 342
           I +  +      S ++ NG   E +
Sbjct: 506 IMEKGIKKEPGCSLIEMNGIIHEFV 530



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 187/443 (42%), Gaps = 58/443 (13%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H  ++K G   +  +  +L+  Y   GD A+A  L  E      V W  ++SG+   
Sbjct: 63  RAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRC 122

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
               EAC  F +M RAG         SVL AC + G      GMQVH  V+ S    D  
Sbjct: 123 RRFGEACCSFVDMARAGAAPTPVTYVSVLSACGK-GTGDVLLGMQVHGRVVGSGVLPDLR 181

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM--- 181
           V N L+ MY  C +  + A ++F+ ++ R ++SW S++S  ++ G       LF RM   
Sbjct: 182 VENALVDMYAECAD-MESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPER 240

Query: 182 -------------QREGFRYSLK-----------PNEYTFGSLITAAYSSVLSGSYLLQQ 217
                        Q   FR +L+            +E+T  S+ITA   + L    + + 
Sbjct: 241 DTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITAC--AQLGALEMGEW 298

Query: 218 ILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE 277
           +   + + G+  D +VG+AL+  +++ G+   A  +F+ M  ++  +   ++     G  
Sbjct: 299 VRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAII----LGLA 354

Query: 278 VHGYLIRS--GLFDMVAVGN--------GLVNMYAKCGTIDDSRSVFRFM-----IGKDS 322
           V+GY   +      M+ V          G++      G +D  R  F  M     I  + 
Sbjct: 355 VNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNV 414

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST-LSSCASLGWIMLGQQIHG 381
           V +  +I    + G   EA+     M     M+ N ++  T L++C   G   +G+ +  
Sbjct: 415 VHYGCIIDLFGRAGKITEALDAIDQMP----MTPNSTIWGTLLAACRVHGNSEIGELVTE 470

Query: 382 EGLKLGLDSDVSVSNALLS-LYA 403
             L+  +D + S    LLS +YA
Sbjct: 471 RLLQ--MDPENSTVYTLLSNIYA 491


>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 600

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 227/581 (39%), Positives = 334/581 (57%), Gaps = 17/581 (2%)

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSD-------VSVSNALLSL-YADAGYLSRCLKVFF 416
           S C +L  +    QIH   LK GL ++        S S+ L S+ YA +           
Sbjct: 26  SHCNTLSKL---TQIHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPPSHTTST 82

Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
             P +D   +N++I A++ +    S +  +Y  M R G +PN  TF  +L   +     +
Sbjct: 83  PTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLR 142

Query: 477 LGHQVHAQVIKYNVANETTIENALLSCYGKCGE--MDDCEKIFARMSERRDEVSWNSMIS 534
           LG  VH  V+K+    +  + N L+  Y   GE   +  EK+F   S + D V+W++MI+
Sbjct: 143 LGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDD-SPKMDTVTWSAMIA 201

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           G++      +A++L   M   G   D  T  +VLSACA +  LE G  V +   +  +  
Sbjct: 202 GFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPK 261

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
            V + +AL+DM++KCG +D A + F  M  R + SW S+I+G A HG G  A++LF +M 
Sbjct: 262 SVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMV 321

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
            +G  PD V F+GVLSACSH+GLVD+G  +F SM + + ++P++E + CMVDLL R G +
Sbjct: 322 ENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFV 381

Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
            +  EF+ KMP  PN +IWRT++ AC      + +LG   +  L + EP +  NYVLL+N
Sbjct: 382 KEAFEFVQKMPFEPNQIIWRTIITACHATG--ELKLGESISKELIKSEPMHESNYVLLSN 439

Query: 775 MYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKE 834
           +YA   +WE   K R+ M    +KK  G + + + + ++ FVAGD+SH +   IYE + E
Sbjct: 440 IYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDE 499

Query: 835 LNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRV 893
           + ++++ AGYVP T   L D++ E KED +  HSEK+A+AF L        IRI+KNLRV
Sbjct: 500 MGREIKKAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVKNLRV 559

Query: 894 CGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           C DCHSA KFISK+  REIV+RD NRFHHF +G CSC D+W
Sbjct: 560 CEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCRDFW 600



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 176/390 (45%), Gaps = 23/390 (5%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNM--------YAKCGTIDDSRSVFRFMIGKDSVSW 325
           K  ++H +++++GL +   +     +         YA       S +        D+  +
Sbjct: 33  KLTQIHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPPSHTTSTPTPSYDAFLF 92

Query: 326 NTMISGLDQN-GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           NT+I    Q       + + +  M R G+  + F+    L  CA +G + LG+ +HG  +
Sbjct: 93  NTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVV 152

Query: 385 KLGLDSDVSVSNALLSLYADAGY--LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
           K G + DV V N L+ +Y   G        KVF   P+ D V+W+++I  F       S 
Sbjct: 153 KFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFV-RLGCSSR 211

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
           AV  + +M+  G  P+ +T +++L+A +     +LG  V + V K N+     + NAL+ 
Sbjct: 212 AVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALID 271

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            + KCG +D   K+F +M + R  VSW S+I+G   +     A++L   M++ G   D  
Sbjct: 272 MFAKCGNVDKAIKLFRQM-DSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDV 330

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRF 618
            F  VLSAC+    +++G        R    F +V        +VD+  + G +  A  F
Sbjct: 331 AFIGVLSACSHSGLVDKGRYYFGSMER---NFSIVPKVEHYGCMVDLLCRGGFVKEAFEF 387

Query: 619 FDLMPVR-NVYSWNSMISGYARHGHGDKAL 647
              MP   N   W ++I+  A H  G+  L
Sbjct: 388 VQKMPFEPNQIIWRTIIT--ACHATGELKL 415



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 150/320 (46%), Gaps = 15/320 (4%)

Query: 230 DLYVGSALVSGFARL-----GNFYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEV 278
           D ++ + L+  +++       +F + R +    +  N  +   +++G       R GK V
Sbjct: 88  DAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCV 147

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGT--IDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           HG +++ G  + V V N L++MY   G    + +  VF      D+V+W+ MI+G  + G
Sbjct: 148 HGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLG 207

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
           C   A+  F  M+  G+     +++S LS+CA LG + LG+ +     K  +   V + N
Sbjct: 208 CSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCN 267

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           AL+ ++A  G + + +K+F  M     VSW SVI   A       +AV  + +M   G +
Sbjct: 268 ALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLA-MHGRGLDAVSLFDEMVENGIT 326

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEK 515
           P+ V FI +L+A S   +   G      + + +++  +      ++    + G + +  +
Sbjct: 327 PDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFE 386

Query: 516 IFARMSERRDEVSWNSMISG 535
              +M    +++ W ++I+ 
Sbjct: 387 FVQKMPFEPNQIIWRTIITA 406



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 139/294 (47%), Gaps = 23/294 (7%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGD--LASASKLFDEMPDRNSVSWACIVSGY 61
            K  H  ++K GF  DV + NTLI++Y  +G+     A K+FD+ P  ++V+W+ +++G+
Sbjct: 144 GKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGF 203

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G S+ A  +F+EM   G   +   + SVL AC + G    + G  V   V K N   
Sbjct: 204 VRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLG--ALELGKWVESYVEKKNIPK 261

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              + N LI M+  C  + D A ++F ++++R ++SW S+I+  +  G  +    LF  M
Sbjct: 262 SVELCNALIDMFAKC-GNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEM 320

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQ------QILAMVKKAGLLSDLYV 233
              G    + P++  F  +++A   S L   G Y          I+  V+  G + DL  
Sbjct: 321 VENG----ITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLC 376

Query: 234 GSALVSGFARLGNFYYARKIFE--QMIQKNVVSMNGLMEGRRKGKEVHGYLIRS 285
                 GF +    +  +  FE  Q+I + +++        + G+ +   LI+S
Sbjct: 377 R----GGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKS 426



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 167/387 (43%), Gaps = 65/387 (16%)

Query: 17  AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKE 76
           +YD FL NTLI  Y +  D  S S LF                              ++ 
Sbjct: 86  SYDAFLFNTLIRAYSQTRDSKSNSFLF------------------------------YRT 115

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
           M+R G   N++    VL+ C   G    + G  VH  V+K     D  V N LI MY  C
Sbjct: 116 MLRYGVTPNKFTFPFVLKGC--AGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMY-CC 172

Query: 137 L--ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
           L  +  + A ++F++    D ++W+++I+ + + G +     LF  MQ  G    + P+E
Sbjct: 173 LGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMG----VCPDE 228

Query: 195 YTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
            T  S+++A     L    L + + + V+K  +   + + +AL+  FA+ GN   A K+F
Sbjct: 229 ITMVSVLSACAD--LGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLF 286

Query: 255 EQMIQKNVVSMNGLMEGRRKGKEVHGY-LIRSGLFDMVAVGNGL-------VNMYAKC-- 304
            QM  + +VS   ++ G      +HG  L    LFD + V NG+       + + + C  
Sbjct: 287 RQMDSRTIVSWTSVIAGL----AMHGRGLDAVSLFDEM-VENGITPDDVAFIGVLSACSH 341

Query: 305 -GTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
            G +D  R  F      F I      +  M+  L + G  +EA   F  +++     +  
Sbjct: 342 SGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEA---FEFVQKMPFEPNQI 398

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLK 385
              + +++C + G + LG+ I  E +K
Sbjct: 399 IWRTIITACHATGELKLGESISKELIK 425


>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
 gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
 gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
          Length = 665

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 227/598 (37%), Positives = 336/598 (56%), Gaps = 52/598 (8%)

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSR--------CLKVFFLMPEHDQVSWNSVI 430
           IH   +K G++S+   +++L+ +YA  G  +         CL      P    V WN++I
Sbjct: 78  IHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLATGGGAP----VMWNALI 133

Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
                S         + +DM RA      VT++++L+A        LG QVH +V++  V
Sbjct: 134 SGHNRSGRFELSCCSF-VDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGV 192

Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSER--------------------------- 523
             +  +ENAL+  Y +CG+MD    +F  M  R                           
Sbjct: 193 LPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDH 252

Query: 524 ---RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
              RD ++W +MI GY+       A+    +M     R D FT  +V++ACA +  LE G
Sbjct: 253 MPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETG 312

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
                   R  ++ DV +G+AL+DMYSKCG I+ A   F  M  R+ ++W ++I G A +
Sbjct: 313 EWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVN 372

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
           G G++A+ +F +M      PD VTFVGVL+AC+HAGLVD+G + F SM++ Y + P +  
Sbjct: 373 GRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVH 432

Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR---KTELGRKAANM 757
           + C++D+LGRAG+L +  + I+KMP+ PNS IW T+L     A+CR    +E+G  AA  
Sbjct: 433 YGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLL-----ASCRVYGNSEIGELAAER 487

Query: 758 LFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVA 817
           L E++P N+  Y+LL+NMYA   +W+DV + R+ + E  +KKE GCS + M   +H FVA
Sbjct: 488 LLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEFVA 547

Query: 818 GDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-V 876
            D SHP    IY KL+ +   +R+AGYVP     L ++  E K+ ++ +HSEK+AV F +
Sbjct: 548 ADRSHPMNKEIYSKLENVLTDLRNAGYVPDVTEVLVEVTEEEKQKVLYWHSEKLAVTFAL 607

Query: 877 LTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           LT  S + IRI+KNLR+C DCH+A K ISK+ GRE+++RD  RFHHF  G CSC DYW
Sbjct: 608 LTSESNVIIRIVKNLRMCLDCHNAIKLISKLYGREVIVRDRTRFHHFRHGSCSCKDYW 665



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 175/386 (45%), Gaps = 39/386 (10%)

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
           G   V WN +ISG +++G +E +  +F  M R   M++  + +S LS+C     ++LG Q
Sbjct: 123 GGAPVMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQ 182

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYAD-------------------------------AGY 407
           +H   L+ G+  D  V NAL+ +YA+                               +G 
Sbjct: 183 VHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQ 242

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           + R   +F  MPE D ++W ++I  +        +A++ +  M+      +  T ++++ 
Sbjct: 243 VDRARDLFDHMPERDTIAWTAMIDGYVQV-GRFRDALETFRYMQICKVRADEFTMVSVVT 301

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
           A +     + G      + +  +  +  + NAL+  Y KCG ++    +F  M   RD+ 
Sbjct: 302 ACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDM-HNRDKF 360

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
           +W ++I G   N    +A+++ + M++  Q  D  TF  VL+AC     +++G E     
Sbjct: 361 TWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSM 420

Query: 588 VRAC-LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGD- 644
             A  +   VV    L+D+  + G++  A    D MP++ N   W ++++    +G+ + 
Sbjct: 421 TEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEI 480

Query: 645 KALTLFSQMKLDGPLPDHVTFVGVLS 670
             L     ++LD   PD+ T   +LS
Sbjct: 481 GELAAERLLELD---PDNSTAYILLS 503



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 113/462 (24%), Positives = 190/462 (41%), Gaps = 66/462 (14%)

Query: 52  VSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVH 111
           V W  ++SG+   G    +C  F +MVRA  +       SVL AC +        GMQVH
Sbjct: 127 VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGK--GKDLLLGMQVH 184

Query: 112 CLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDT 171
             VL+S    D  V N L+ MY  C +  D A  +FE ++ R + SW S+IS   + G  
Sbjct: 185 KRVLESGVLPDQRVENALVDMYAECGD-MDAAWVLFEGMQMRSMASWTSVISGLVRSGQV 243

Query: 172 ISVFKLFSRMQR-----------------------EGFRY----SLKPNEYTFGSLITAA 204
                LF  M                         E FRY     ++ +E+T  S++TA 
Sbjct: 244 DRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTAC 303

Query: 205 YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS 264
             + L      +     + + G+  D++VG+AL+  +++ G+   A  +F+ M  ++  +
Sbjct: 304 --AQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFT 361

Query: 265 MNGLMEG---RRKGKEVHGY---LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM- 317
              ++ G     +G+E       ++R+          G++      G +D  R  F  M 
Sbjct: 362 WTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMT 421

Query: 318 ----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIST-LSSCASLGW 372
               I    V +  +I  L + G  +EA+     M     M  N ++  T L+SC   G 
Sbjct: 422 EAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMP----MKPNSTIWGTLLASCRVYGN 477

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLKVFFLM--------PEHDQ 423
             +G ++  E L L LD D S +  LLS +YA +       ++  ++        P    
Sbjct: 478 SEIG-ELAAERL-LELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSM 535

Query: 424 VSWNSVIGAFADSE-------ALVSEAVKYYLDMRRAGWSPN 458
           +  N +I  F  ++        + S+      D+R AG+ P+
Sbjct: 536 IEMNGIIHEFVAADRSHPMNKEIYSKLENVLTDLRNAGYVPD 577



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 136/325 (41%), Gaps = 15/325 (4%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
            ++I+  VR G +  A  LFD MP+R++++W  ++ GY   G   +A + F+ M      
Sbjct: 231 TSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVR 290

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
            + + + SV+ AC + G    + G      + +     D  V N LI MY  C  S + A
Sbjct: 291 ADEFTMVSVVTACAQLG--ALETGEWARIYMGRLGIKMDVFVGNALIDMYSKC-GSIERA 347

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
             +F+++  RD  +W +II   +  G       +F RM     R    P+E TF  ++TA
Sbjct: 348 LDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRM----LRALQTPDEVTFVGVLTA 403

Query: 204 AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
              + L      +  L+M +   +   +     L+    R G    A    ++M  K   
Sbjct: 404 CTHAGLVDKG-REFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNS 462

Query: 264 SMNG--LMEGRRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFRFM 317
           ++ G  L   R  G    G L    L ++    +     L NMYAK     D R + R +
Sbjct: 463 TIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRI-RQI 521

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAI 342
           I +  +      S ++ NG   E +
Sbjct: 522 IMEKGIKKEPGCSMIEMNGIIHEFV 546



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 42/86 (48%)

Query: 15  GFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF 74
           G   DVF+ N LI++Y + G +  A  +F +M +R+  +W  I+ G    G   EA  MF
Sbjct: 323 GIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMF 382

Query: 75  KEMVRAGFLLNRYALGSVLRACQECG 100
             M+RA    +      VL AC   G
Sbjct: 383 YRMLRALQTPDEVTFVGVLTACTHAG 408


>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/616 (37%), Positives = 342/616 (55%), Gaps = 15/616 (2%)

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           N +I  L + G  ++A+   C         +  +    + SCA    +  G  +H   + 
Sbjct: 51  NQLIQSLCKGGNLKQALHLLCCEPN----PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVD 106

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G D D  ++  L+++Y + G + R LKVF    E     WN++  A A       E + 
Sbjct: 107 SGFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALA-MVGHGKELLD 165

Query: 446 YYLDMRRAGWSPNGVTFINILAA--ASSFSMGKL--GHQVHAQVIKYNVANETTIENALL 501
            Y+ M   G   +  T+  +L A   S  S+  L  G ++HA ++++       +   LL
Sbjct: 166 LYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLL 225

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG--QRL 559
             Y K G +     +F  M  + + VSW++MI+ +  NE+  KA+ L   MM        
Sbjct: 226 DVYAKFGSVSYANSVFCAMPTK-NFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVP 284

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
           +  T   +L ACA +A LE+G  +H   +R  L+  + + +AL+ MY +CG +    R F
Sbjct: 285 NSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVF 344

Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVD 679
           D M  R+V SWNS+IS Y  HG G KA+ +F  M   G  P +++F+ VL ACSHAGLV+
Sbjct: 345 DNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVE 404

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
           EG   F+SM   Y + P +E ++CMVDLLGRA  L +  + I  M   P   +W ++LG+
Sbjct: 405 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGS 464

Query: 740 CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKK 799
            CR +C   EL  +A+ +LFE+EP+NA NYVLLA++YA    W +     K ++   ++K
Sbjct: 465 -CRIHC-NVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQK 522

Query: 800 EAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES 859
             GCSW+ +K  V+ FV+ DE +P+ + I+  L +L+ +M+  GYVPQT   L+DL+ E 
Sbjct: 523 LPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEE 582

Query: 860 KEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSN 918
           KE +V  HSEK+AVAF L   +K   IRI KNLR+C DCH+  KFISK   REI++RD N
Sbjct: 583 KERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVN 642

Query: 919 RFHHFNDGKCSCGDYW 934
           RFHHF DG CSCGDYW
Sbjct: 643 RFHHFRDGVCSCGDYW 658



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 187/420 (44%), Gaps = 37/420 (8%)

Query: 117 SNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFK 176
           + QTF+ L+ +   A   S     D  R + +    +D      +I++Y + G      K
Sbjct: 77  TQQTFEHLIYSC--AQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALK 134

Query: 177 LFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSA 236
           +F   +            Y + +L  A               LAMV     L DLY+   
Sbjct: 135 VFDETRERTI--------YVWNALFRA---------------LAMVGHGKELLDLYIQMN 171

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
            +   +    + Y       +++  VVS   +    RKGKE+H +++R G    + V   
Sbjct: 172 WIGTPSDRFTYTY-------VLKACVVSELSVCP-LRKGKEIHAHILRHGYEANIHVMTT 223

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMS- 355
           L+++YAK G++  + SVF  M  K+ VSW+ MI+   +N    +A+  F  M  +   S 
Sbjct: 224 LLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSV 283

Query: 356 -SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
            ++ ++++ L +CA L  +  G+ IHG  L+  LDS + V NAL+++Y   G +    +V
Sbjct: 284 PNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRV 343

Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
           F  M + D VSWNS+I  +        +A++ + +M   G SP+ ++FI +L A S   +
Sbjct: 344 FDNMKKRDVVSWNSLISIYG-MHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGL 402

Query: 475 GKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
            + G  +   ++ KY +         ++   G+   + +  K+   M        W S++
Sbjct: 403 VEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLL 462



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 105/426 (24%), Positives = 182/426 (42%), Gaps = 59/426 (13%)

Query: 102 SGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSI 161
           +   +G+ VH  ++ S    D  ++  LI MY   L S D A ++F+E   R +  WN++
Sbjct: 92  NSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYE-LGSIDRALKVFDETRERTIYVWNAL 150

Query: 162 ISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ--QIL 219
               +  G    +  L+ +M   G       + +T+  ++ A   S LS   L +  +I 
Sbjct: 151 FRALAMVGHGKELLDLYIQMNWIG----TPSDRFTYTYVLKACVVSELSVCPLRKGKEIH 206

Query: 220 AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL----------- 268
           A + + G  ++++V + L+  +A+ G+  YA  +F  M  KN VS + +           
Sbjct: 207 AHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPM 266

Query: 269 --------------------------------MEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
                                           +    +GK +HGY++R  L  ++ V N 
Sbjct: 267 KALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNA 326

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           L+ MY +CG +   + VF  M  +D VSWN++IS    +G  ++AI  F  M   G+  S
Sbjct: 327 LITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPS 386

Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGL-KLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
             S I+ L +C+  G +  G+ +    L K  +   +     ++ L   A  L   +K+ 
Sbjct: 387 YISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLI 446

Query: 416 FLMP-EHDQVSWNSVIGA---FADSE-ALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
             M  E     W S++G+     + E A  +  V + L+ R AG   N V   +I A A 
Sbjct: 447 EDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAG---NYVLLADIYAEAK 503

Query: 471 SFSMGK 476
            +S  K
Sbjct: 504 LWSEAK 509



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 118/223 (52%), Gaps = 11/223 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  IL+HG+  ++ +  TL++VY + G ++ A+ +F  MP +N VSW+ +++ +
Sbjct: 200 RKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACF 259

Query: 62  THKGMSNEACKMFKEMV--RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
               M  +A ++F+ M+      + N   + ++L+AC   G +  + G  +H  +L+   
Sbjct: 260 AKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQAC--AGLAALEQGKLIHGYILRRQL 317

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
                V N LI MYG C E     +R+F+ ++ RD++SWNS+IS+Y   G      ++F 
Sbjct: 318 DSILPVLNALITMYGRCGEVL-MGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFE 376

Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILA 220
            M  +G    + P+  +F +++ A   +  V  G  L + +L+
Sbjct: 377 NMIHQG----VSPSYISFITVLGACSHAGLVEEGKILFESMLS 415



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 145/324 (44%), Gaps = 19/324 (5%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++  GF  D FL   LIN+Y  +G +  A K+FDE  +R    W  +       G  
Sbjct: 101 HRCLVDSGFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHG 160

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRAC--QECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
            E   ++ +M   G   +R+    VL+AC   E      + G ++H  +L+     +  V
Sbjct: 161 KELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHV 220

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
              L+ +Y     S   A  +F  + T++ +SW+++I+ +++    +   +LF  M  E 
Sbjct: 221 MTTLLDVYAK-FGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEA 279

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQ---ILAMVKKAGLLSDLYVGSALVSGFA 242
                 PN  T  +++ A      +G   L+Q   I   + +  L S L V +AL++ + 
Sbjct: 280 CNSV--PNSVTMVNMLQAC-----AGLAALEQGKLIHGYILRRQLDSILPVLNALITMYG 332

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGL-----MEG-RRKGKEVHGYLIRSGLFDMVAVGNG 296
           R G     +++F+ M +++VVS N L     M G  +K  ++   +I  G+         
Sbjct: 333 RCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFIT 392

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGK 320
           ++   +  G +++ + +F  M+ K
Sbjct: 393 VLGACSHAGLVEEGKILFESMLSK 416


>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
 gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 228/623 (36%), Positives = 341/623 (54%), Gaps = 69/623 (11%)

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGY--LSRCLKVFFLMPEHDQVSWNSVI-GAF 433
           +Q+H   L+ G   D  VS  L+  YA+  +  L+  LKVF  +P  +   +N +I G  
Sbjct: 47  KQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCL 106

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE 493
            ++E    +A+  Y  M  A   PN  T+  +  A ++    + G QVHA VIK  ++ +
Sbjct: 107 QNNEP--CKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGD 164

Query: 494 TTIE-------------------------------NALLSCYGKCGEMDDCEKIFARMSE 522
             I                                NA++  Y KCGE++  +++F  M +
Sbjct: 165 VHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMED 224

Query: 523 R------------------------------RDEVSWNSMISGYIHNELLPKAMNLVWFM 552
           +                              ++E+SW++MI GYI      +A+ +   M
Sbjct: 225 KNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVM 284

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRI 612
            +   R   F  ++VL+ACA++  L++G  +HA        FD V+G+ALVDMY+KCGR+
Sbjct: 285 QREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRL 344

Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
           D A   F+ M  + V++WN+MI G   HG  + A+ LF +M+     P+ +T +GVLSAC
Sbjct: 345 DMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSAC 404

Query: 673 SHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI 732
           +H+G+VDEG + F SM +VYG+ P +E + C+VDLLGRAG L + EE +  MP+ P++ +
Sbjct: 405 AHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAV 464

Query: 733 WRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAM 792
           W  +LGAC +      ELG +   +L E+EPQN+  Y LL+N+YA  G+W+DVA  RK M
Sbjct: 465 WGALLGACRKHG--DVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLM 522

Query: 793 KEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFAL 852
           KE  VK   G S +     VH F  GD SHP+   IY  LK + ++++  G+ P T   L
Sbjct: 523 KERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVL 582

Query: 853 FDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGRE 911
           FD+E E KE  + YHSEK+A+AF ++       I ++KNLR+C DCHSAFK IS++  RE
Sbjct: 583 FDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDRE 642

Query: 912 IVLRDSNRFHHFNDGKCSCGDYW 934
           I++RD  R+HHF  G CSC D+W
Sbjct: 643 IIVRDRARYHHFKTGTCSCKDFW 665



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 200/429 (46%), Gaps = 11/429 (2%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSC-LESTDCARRIFEEIETRDLISWNSIISVYSQ 167
           QVH + L++    D  VS  L+  Y +    + + A ++FE +   ++  +N II    Q
Sbjct: 48  QVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQ 107

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
             +       + +M     R    PN++T+ +L  A  ++  +   +  Q+ A V K GL
Sbjct: 108 NNEPCKAICCYYKMMIAHAR----PNKFTYPTLFKACTAAEAAEEGV--QVHAHVIKQGL 161

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY--LIRS 285
             D+++ SA +  +   G    AR++  +    +V+  N +++G  K  EV     L  S
Sbjct: 162 SGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWS 221

Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
                V   N +V+  AKCG I+++R +F  M  K+ +SW+ MI G  + G Y+EA+  F
Sbjct: 222 MEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVF 281

Query: 346 CAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA 405
             M+R+ +    F L S L++CA+LG +  G+ IH          D  +  AL+ +YA  
Sbjct: 282 NVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKC 341

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
           G L     VF  M + +  +WN++I           +A++ +  M++  + PNG+T + +
Sbjct: 342 GRLDMAWDVFEKMEKKEVFTWNAMICGLG-MHGRAEDAIELFFKMQKQKFRPNGITLLGV 400

Query: 466 LAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           L+A +   M   G ++   + + Y +         ++   G+ G + + E++   M    
Sbjct: 401 LSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEP 460

Query: 525 DEVSWNSMI 533
               W +++
Sbjct: 461 SAAVWGALL 469



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 212/447 (47%), Gaps = 41/447 (9%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYV--RVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           K  H   L+ G   D ++  TL+  Y      +L  A K+F+ +P+ N   +  I+ G  
Sbjct: 47  KQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCL 106

Query: 63  HKGMSNEACKM---FKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
               +NE CK    + +M+ A    N++   ++ +AC        + G+QVH  V+K   
Sbjct: 107 Q---NNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTA--AEAAEEGVQVHAHVIKQGL 161

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           + D  + +  I MYGS  E  + ARR+  E    D+I +N++I  Y + G+  +  +LF 
Sbjct: 162 SGDVHIRSAGIQMYGSFGE-VEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFW 220

Query: 180 RMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
            M+ +        N  ++  +++  A   ++  +   +++   +K+   +S     SA++
Sbjct: 221 SMEDK--------NVGSWNVMVSGMAKCGMIEEA---RELFNEMKEKNEIS----WSAMI 265

Query: 239 SGFARLGNFYYARKIFEQM----------IQKNVVSMNGLMEGRRKGKEVHGYL-IRSGL 287
            G+ + G +  A ++F  M          +  +V++    +    +G+ +H Y+   S  
Sbjct: 266 DGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNS 325

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
           FD V +G  LV+MYAKCG +D +  VF  M  K+  +WN MI GL  +G  E+AI  F  
Sbjct: 326 FDAV-LGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFK 384

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GLDSDVSVSNALLSLYADAG 406
           M++     +  +L+  LS+CA  G +  G +I     ++ G++  +     ++ L   AG
Sbjct: 385 MQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAG 444

Query: 407 YLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            L    +V + MP E     W +++GA
Sbjct: 445 LLGEAEEVMYSMPMEPSAAVWGALLGA 471



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 154/327 (47%), Gaps = 17/327 (5%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N +++   + G +  A +LF+EM ++N +SW+ ++ GY   G   EA ++F  M R    
Sbjct: 231 NVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIR 290

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
             ++ L SVL AC   G      G  +H  V  ++ +FD ++   L+ MY  C    D A
Sbjct: 291 PRKFVLSSVLAACANLG--ALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKC-GRLDMA 347

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT-FGSLIT 202
             +FE++E +++ +WN++I      G      +LF +MQ++ FR    PN  T  G L  
Sbjct: 348 WDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFR----PNGITLLGVLSA 403

Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
            A+S ++     L+   +M +  G+   +     +V    R G    A ++   M  +  
Sbjct: 404 CAHSGMVDEG--LRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPS 461

Query: 263 VSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFRF 316
            ++ G + G  R+ G    G  +   L ++    +G    L N+YA+ G  DD  +V R 
Sbjct: 462 AAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANV-RK 520

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIM 343
           ++ +  V  +T IS +D +G   E  M
Sbjct: 521 LMKERGVKTSTGISMIDFDGVVHEFKM 547



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 152/345 (44%), Gaps = 23/345 (6%)

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC--GEMDDCEKIFA 518
           T +++L   SS S+  L  QVHA  ++     +  +   L+ CY       ++   K+F 
Sbjct: 30  TILDLLNTKSSTSLHHL-KQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFE 88

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
            +      V +N +I G + N    KA+   + MM    R + FT+ T+  AC +    E
Sbjct: 89  YVPNPNVFV-FNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAE 147

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
            G++VHA  ++  L  DV I SA + MY   G ++ A R        +V  +N+MI GY 
Sbjct: 148 EGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYL 207

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
           + G  + A  LF  M+ D  +      V  ++ C   G+++E  + F  M +   +    
Sbjct: 208 KCGEVEAAKELFWSME-DKNVGSWNVMVSGMAKC---GMIEEARELFNEMKEKNEI---- 259

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKM---PITPNSLIWRTVLGACCRANCRKTELGRKAA 755
             +S M+D   + G   +  E  N M    I P   +  +VL AC  AN    + GR   
Sbjct: 260 -SWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAAC--ANLGALDQGRWIH 316

Query: 756 NMLFEMEPQNAVNYVL---LANMYASGGKWEDVAKARKAMKEAEV 797
              +     N+ + VL   L +MYA  G+ +      + M++ EV
Sbjct: 317 --AYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEV 359


>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 229/590 (38%), Positives = 337/590 (57%), Gaps = 17/590 (2%)

Query: 348 MRRDGLMS-SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
           +R D L S ++FSLI  L SCA  G   LG+  H + +K+G + D+ +   LL  YA  G
Sbjct: 2   LRNDVLPSKTSFSLI--LRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVG 59

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
            L    +VF  MP  D V+ N++I A +     V EA   + +M       N  ++ +++
Sbjct: 60  DLKCAKRVFMGMPRRDVVANNAMISALS-KHGYVEEARNLFDNMTER----NSCSWNSMI 114

Query: 467 AAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
                    KLG    A+++   N   +    NA++  Y K  ++   +++F  M   R+
Sbjct: 115 TCYC-----KLGDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARN 169

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
            V+WN+MIS Y+       A+++   M     +    T  ++LSACA +  L+ G  +H 
Sbjct: 170 SVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHG 229

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
                 L+ DVV+G+AL+DMY KCG ++ A   F  +  +N++ WNS+I G   +G G++
Sbjct: 230 YIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEE 289

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMV 705
           A+  F  M+ +G  PD VTFVG+LS CSH+GL+  G ++F  M  VYGL P +E + CMV
Sbjct: 290 AIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMV 349

Query: 706 DLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQN 765
           DLLGRAG L +  E I  MP+ PNS++  ++L AC     + T+LG +    L E++P +
Sbjct: 350 DLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRAC--QIHKDTKLGEQVTQQLLELDPCD 407

Query: 766 AVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
             NYV L+N+YAS  +W+DV   RK M +  V K  GCS + + + VH FVAGD SHP+ 
Sbjct: 408 GGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQF 467

Query: 826 DLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLP 884
             I   L E+ ++++  G+VP T   L D+E E KE  + YHSE+IAVAF +++      
Sbjct: 468 TQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKT 527

Query: 885 IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           IR++KNLR C DCHSA K IS    REI++RD  RFHHF +G CSC DYW
Sbjct: 528 IRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 173/380 (45%), Gaps = 48/380 (12%)

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC 136
           M+R   L ++ +   +LR+C   G +  + G   HC ++K    +D ++   L+  Y   
Sbjct: 1   MLRNDVLPSKTSFSLILRSCAISGEA--QLGEAFHCQIMKMGFEYDMILQTGLLDFYAK- 57

Query: 137 LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
           +    CA+R+F  +  RD+++ N++IS  S+ G       LF  M           N  +
Sbjct: 58  VGDLKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTER--------NSCS 109

Query: 197 FGSLIT-----------------------AAYSSVLSGSYLLQQILA---MVKKAGLLSD 230
           + S+IT                        ++++++ G    +Q++A   +    G   +
Sbjct: 110 WNSMITCYCKLGDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARN 169

Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNV----VSMNGLMEG------RRKGKEVHG 280
               + ++S + + G F  A  +F+QM  +NV    V+M  L+           G+ +HG
Sbjct: 170 SVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHG 229

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
           Y+    L   V +GN L++MY KCG ++ +  VF  +  K+   WN++I GL  NG  EE
Sbjct: 230 YIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEE 289

Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GLDSDVSVSNALL 399
           AI  F  M ++G+     + +  LS C+  G +  GQ+   E L + GL+  V     ++
Sbjct: 290 AIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMV 349

Query: 400 SLYADAGYLSRCLKVFFLMP 419
            L   AGYL   L++   MP
Sbjct: 350 DLLGRAGYLKEALELIRAMP 369



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 176/388 (45%), Gaps = 48/388 (12%)

Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQIL-AMVKKAGLLSDLYVGSALVSGFARL 244
            R  + P++ +F  ++    S  +SG   L +     + K G   D+ + + L+  +A++
Sbjct: 2   LRNDVLPSKTSFSLILR---SCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKV 58

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS-GLFDMVA-----VGNGLV 298
           G+   A+++F  M +++VV+ N ++    K    HGY+  +  LFD +        N ++
Sbjct: 59  GDLKCAKRVFMGMPRRDVVANNAMISALSK----HGYVEEARNLFDNMTERNSCSWNSMI 114

Query: 299 NMYAKCGTIDDSRSVFR-----------------------------FMI---GKDSVSWN 326
             Y K G I+ +R +F                              F++    ++SV+WN
Sbjct: 115 TCYCKLGDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWN 174

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
           TMIS   Q G +  AI  F  M+ + +  +  +++S LS+CA LG + +G+ IHG     
Sbjct: 175 TMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTK 234

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
            L  DV + NAL+ +Y   G L   + VF  +   +   WNS+I           EA+  
Sbjct: 235 RLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLG-MNGRGEEAIAA 293

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYG 505
           ++ M + G  P+GVTF+ IL+  S   +   G +  ++++  Y +         ++   G
Sbjct: 294 FIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLG 353

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMI 533
           + G + +  ++   M  + + +   S++
Sbjct: 354 RAGYLKEALELIRAMPMKPNSMVLGSLL 381



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 170/391 (43%), Gaps = 30/391 (7%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           FH QI+K GF YD+ L   L++ Y +VGDL  A ++F  MP R+ V+   ++S  +  G 
Sbjct: 32  FHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVFMGMPRRDVVANNAMISALSKHGY 91

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA  +F  M       N  +  S++    + G       +    L+   N   D +  
Sbjct: 92  VEEARNLFDNMTER----NSCSWNSMITCYCKLGD------INSARLMFDCNPVKDVVSW 141

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N +I  Y    +              R+ ++WN++IS Y Q G+  +   +F +MQ E  
Sbjct: 142 NAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSE-- 199

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
             ++KP E T  SL++A   + L    + + I   ++   L  D+ +G+AL+  + + G 
Sbjct: 200 --NVKPTEVTMVSLLSAC--AHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGA 255

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
              A  +F  + +KN+   N ++ G     +G+E     I      +   G   V + + 
Sbjct: 256 LEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSG 315

Query: 304 C---GTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNFCAMRRDGLMS 355
           C   G +   +  F  M+G   +      +  M+  L + G  +EA+    AM    +  
Sbjct: 316 CSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMP---MKP 372

Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
           ++  L S L +C       LG+Q+  + L+L
Sbjct: 373 NSMVLGSLLRACQIHKDTKLGEQVTQQLLEL 403


>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
 gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
          Length = 635

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 219/577 (37%), Positives = 326/577 (56%), Gaps = 11/577 (1%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L  C S   I  G++IH   +  G  S   + N L+ +Y   G L     VF + P  + 
Sbjct: 64  LRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSVFHITPRRNV 123

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
            SW  ++ AFA +   + +A+     M   G SPN +TFI +L A ++ S    G  +H 
Sbjct: 124 FSWTIMVAAFAHNGHYM-DALNLLEIMDLEGISPNSITFIELLGAVAALSWLDRGRALHR 182

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
           ++       +  + N L++ Y KC  + D   +F  ++ R   ++W ++++ Y  N    
Sbjct: 183 RIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSR-SVIAWTALVAAYALNGFFR 241

Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
            A+ +   M   G      TF TV+  CA +A    G EVH   + A  E +V +G+AL+
Sbjct: 242 DALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHGV-IDARSEANVCVGNALI 300

Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF-----SQMKLDGP 658
           +MY KC   D A + FD M  +++ +WNSMI+ Y ++G+G +AL ++     S+M + G 
Sbjct: 301 NMYGKCASPDEARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGI 360

Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
             D +TF+GVL ACSHAGLV +  K + SM   YG  P   Q  C++DLLGRAG LD+ E
Sbjct: 361 THDDITFIGVLFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGRAGWLDEAE 420

Query: 719 EFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYAS 778
           EFIN MP  P+  IW  +LGAC        E   +AA+ +  + P ++ +YV L+N+YA 
Sbjct: 421 EFINSMPYHPDHTIWTILLGACITHA--DVERAARAADRIMALRPTDSGSYVALSNLYAL 478

Query: 779 GGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQK 838
             +W+D+A+ RK M +  V K AG S + +   +H F+AGD SHP K  IYE+L+ +   
Sbjct: 479 AERWDDMARMRKLMDQRGVFKMAGKSSIEIGGVLHEFIAGDTSHPRKREIYEELRRIEGV 538

Query: 839 MRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDC 897
           +R+ GYVP  K  L +   E+KE +  +HSE++A+AF +++      +RIMKNLRVC DC
Sbjct: 539 IRERGYVPDIKAVLHNAAREAKEKMCCFHSERLAIAFGMISSPGGTELRIMKNLRVCPDC 598

Query: 898 HSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           HSA K ISK  GR+I++RD+NRFH F +G CSC DYW
Sbjct: 599 HSATKIISKFSGRKIIVRDANRFHEFRNGSCSCEDYW 635



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 188/391 (48%), Gaps = 32/391 (8%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           +GK +H +++  G      + N LV MY KCG++  ++SVF     ++  SW  M++   
Sbjct: 75  EGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFA 134

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
            NG Y +A+     M  +G+  ++ + I  L + A+L W+  G+ +H      G  +D+ 
Sbjct: 135 HNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSWLDRGRALHRRIACCGFLADIF 194

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V+N L+++YA    L+    VF  +     ++W +++ A+A       +A+K +L M   
Sbjct: 195 VANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYA-LNGFFRDALKVFLLMTLD 253

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G  P  VTF+ ++   +  ++  +G +VH  +   + AN   + NAL++ YGKC   D+ 
Sbjct: 254 GVEPTEVTFVTVVDVCADIAVFGIGREVHGVIDARSEAN-VCVGNALINMYGKCASPDEA 312

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR-----GQRLDHFTFATVL 568
            K+F  M +R+D ++WNSMI+ Y  N    +A+ +   M +      G   D  TF  VL
Sbjct: 313 RKVFDAM-QRKDIITWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGITHDDITFIGVL 371

Query: 569 SACASVATLERGMEVHACGVR-ACLEFDVVIGS-----------ALVDMYSKCGRIDYAS 616
            AC+           HA  V+ +C  +  +IG             L+D+  + G +D A 
Sbjct: 372 FACS-----------HAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGRAGWLDEAE 420

Query: 617 RFFDLMPVRNVYS-WNSMISGYARHGHGDKA 646
            F + MP    ++ W  ++     H   ++A
Sbjct: 421 EFINSMPYHPDHTIWTILLGACITHADVERA 451



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 4/178 (2%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H +I   GF  D+F+ N LIN+Y +   LA A  +F+ +  R+ ++W  +V+ Y   
Sbjct: 178 RALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALN 237

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   +A K+F  M   G         +V+  C +     F  G +VH  V+ +    +  
Sbjct: 238 GFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAV--FGIGREVHG-VIDARSEANVC 294

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
           V N LI MYG C  S D AR++F+ ++ +D+I+WNS+I+VY Q G      +++ RMQ
Sbjct: 295 VGNALINMYGKC-ASPDEARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQ 351



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 127/267 (47%), Gaps = 10/267 (3%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H  I+  GF    +LCN L+ +Y + G L +A  +F   P RN  SW  +V+ + 
Sbjct: 75  EGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFA 134

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
           H G   +A  + + M   G   N      +L A      S    G  +H  +       D
Sbjct: 135 HNGHYMDALNLLEIMDLEGISPNSITFIELLGAVA--ALSWLDRGRALHRRIACCGFLAD 192

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V+N LI MY  C    D A  +FE + +R +I+W ++++ Y+  G      K+F  M 
Sbjct: 193 IFVANCLINMYAKCRSLAD-ACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMT 251

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            +G    ++P E TF +++       + G   + + +  V  A   +++ VG+AL++ + 
Sbjct: 252 LDG----VEPTEVTFVTVVDVCADIAVFG---IGREVHGVIDARSEANVCVGNALINMYG 304

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLM 269
           +  +   ARK+F+ M +K++++ N ++
Sbjct: 305 KCASPDEARKVFDAMQRKDIITWNSMI 331


>gi|302764988|ref|XP_002965915.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
 gi|300166729|gb|EFJ33335.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
          Length = 912

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 289/933 (30%), Positives = 459/933 (49%), Gaps = 120/933 (12%)

Query: 88  ALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC----- 142
           AL + +R+C          G ++H  +       +  + N++I MYG C    D      
Sbjct: 14  ALATAIRSCGIA--KDLAQGRKIHNQIADGEHRGNLFLQNLIIQMYGKCSRIDDAQAVFN 71

Query: 143 -------------------------ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
                                    A+ IF++I + +++SWNS+I+ +SQ G   +  ++
Sbjct: 72  ELPEPNVFSRCILMQAYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEI 131

Query: 178 FSRMQREG-----------------------FRYSLKPNEYTFGSLITAAYSSVLSGSYL 214
           F+RM R                         F  + + N  ++ +LIT       S + +
Sbjct: 132 FARMPRWSSSSWNSMITGYAQSGDLASATAMFDRTPEHNVISWNALITG-----YSDNRM 186

Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK 274
           + +   +  +A    D    +A+++ +A+ G+   A+++F++  Q+++VS   LM     
Sbjct: 187 IPEAKGVFDRAPG-RDKISWNAMLTAYAQSGDLDSAKEVFDRTPQQDIVSCT-LMIKACA 244

Query: 275 GKEVHGYLIR--SGLFDMVAVGNG-LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
            +E+ G+ +   + + D  AV    ++ +Y   G I ++ ++ R M  +D   W +M+S 
Sbjct: 245 VQEILGHAVEIFAAMPDRNAVSYSFMIQIYIDQGKIGEAENLSRRMPQQDPTLWTSMLSA 304

Query: 332 LDQNGCYEEAIMNFC-AMRRDGLMSSNFSLISTLSSCASL----------------GWIM 374
             ++G  EEA   F  A RRD  +S N +L+S  +    L                 W  
Sbjct: 305 YSRHGLVEEARRIFDRAARRDDEVSWN-ALLSAYAQAGHLHLARSTFERMPRHDVVAWTA 363

Query: 375 L-------GQQIHGEGL-KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSW 426
           L       GQ    E L  L  + D+    AL+  Y   G L+   +V+ LMPE ++VS 
Sbjct: 364 LIAVSGQNGQLEEAEVLYDLIPERDLVAWTALIQAYGVNGKLTESKRVYALMPERNRVSH 423

Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI 486
            ++I A++ +  +V    +  LD       P+  T  +++ A       + G+   A+ +
Sbjct: 424 TAMIIAYSQNGEVVQ--ARKMLDTLP---DPDQSTRTSMIVA-----YAQNGYIKDAREM 473

Query: 487 KYNVANETTIE-NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
             ++ N   I  NA++  Y     +D  + +F  + +++  VSWN+M++ Y     L +A
Sbjct: 474 FDSIKNPDVIACNAMMEAYSSAQMLDHAKAMFDSI-KQKTLVSWNTMVAAYAQAGNLDEA 532

Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR---ACLEFDVVIGSAL 602
            ++           D      V+S    +      M++ A   R   +  E D V  +A+
Sbjct: 533 KSI----------FDSIPHKNVVSHNVMIVAYAHNMDL-AEARRIFYSMDEKDTVTWTAM 581

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           V M ++ GR+  A   F  MP RNV SWNS+I+G A  GHG  A+     M+ +G  PDH
Sbjct: 582 VAMVAQHGRLAEAQELFAKMPYRNVVSWNSLIAGMASCGHGMAAVRYLYVMRNEGAKPDH 641

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFIN 722
           +TF+G+L ACSH GLV+EG+ HF SM   +GLIP  E +  MVD+LGRAG+L    E + 
Sbjct: 642 ITFMGILIACSHVGLVEEGWTHFTSMQGDHGLIPWREHYCRMVDVLGRAGQLGAARELLE 701

Query: 723 KMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKW 782
            MP  P+   W ++LG+C        +LG +AA  L + + Q++  YVLLANMY+S G+ 
Sbjct: 702 TMPFIPDVGAWGSLLGSC--KTHSDVKLGTRAAESLLQFDDQSSGPYVLLANMYSSVGRV 759

Query: 783 EDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDA 842
            D    R  MK   VKK+ G S + +   +H FVAG+ SHP    I  +L  L + M+ A
Sbjct: 760 ADALAVRNRMKARGVKKQPGVSLIRVDGVLHRFVAGEASHPRHQEILSELSRLQELMKKA 819

Query: 843 GYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFV-LTRNSKLPIRIMKNLRVCGDCHSAF 901
           GY P TK  L  +  E KE L+SYHSEK+A+AF  +      PIRIMKNLRVC DCH+A 
Sbjct: 820 GYQPDTKAVLHSILDEEKEVLLSYHSEKLAIAFASIACEPGTPIRIMKNLRVCSDCHTAT 879

Query: 902 KFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           KF+SK++ REI++RD  RFH+F +G CSCGDYW
Sbjct: 880 KFLSKLLQREIIVRDGYRFHNFENGTCSCGDYW 912



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 155/633 (24%), Positives = 286/633 (45%), Gaps = 70/633 (11%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF-----KEMV 78
           N++I  Y + GDLASA+ +FD  P+ N +SW  +++GY+   M  EA  +F     ++ +
Sbjct: 144 NSMITGYAQSGDLASATAMFDRTPEHNVISWNALITGYSDNRMIPEAKGVFDRAPGRDKI 203

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
               +L  YA    L + +E               V       D +VS  L+    +  E
Sbjct: 204 SWNAMLTAYAQSGDLDSAKE---------------VFDRTPQQD-IVSCTLMIKACAVQE 247

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
               A  IF  +  R+ +S++ +I +Y  +G       L  RM ++         + T  
Sbjct: 248 ILGHAVEIFAAMPDRNAVSYSFMIQIYIDQGKIGEAENLSRRMPQQ---------DPTLW 298

Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
           + + +AYS       L+++   +  +A    D    +AL+S +A+ G+ + AR  FE+M 
Sbjct: 299 TSMLSAYSR----HGLVEEARRIFDRAARRDDEVSWNALLSAYAQAGHLHLARSTFERMP 354

Query: 259 QKNVVSMNGLM-----EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
           + +VV+   L+      G+ +  EV   LI     D+VA    L+  Y   G + +S+ V
Sbjct: 355 RHDVVAWTALIAVSGQNGQLEEAEVLYDLIPER--DLVA-WTALIQAYGVNGKLTESKRV 411

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           +  M  ++ VS   MI    QNG   +A      +  D   S+  S+I    + A  G+I
Sbjct: 412 YALMPERNRVSHTAMIIAYSQNGEVVQARKMLDTL-PDPDQSTRTSMI---VAYAQNGYI 467

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
              +++  + +K   + DV   NA++  Y+ A  L     +F  + +   VSWN+++ A+
Sbjct: 468 KDAREMF-DSIK---NPDVIACNAMMEAYSSAQMLDHAKAMFDSIKQKTLVSWNTMVAAY 523

Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE 493
           A +  L  EA   +  +         V   N++  A + +M        A+ I Y++  +
Sbjct: 524 AQAGNL-DEAKSIFDSIPH-----KNVVSHNVMIVAYAHNMD----LAEARRIFYSMDEK 573

Query: 494 TTIE-NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
            T+   A+++   + G + + +++FA+M   R+ VSWNS+I+G         A+  ++ M
Sbjct: 574 DTVTWTAMVAMVAQHGRLAEAQELFAKMP-YRNVVSWNSLIAGMASCGHGMAAVRYLYVM 632

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA----LVDMYSK 608
              G + DH TF  +L AC+ V  +E G   H   ++   +  ++        +VD+  +
Sbjct: 633 RNEGAKPDHITFMGILIACSHVGLVEEGW-THFTSMQG--DHGLIPWREHYCRMVDVLGR 689

Query: 609 CGRIDYASRFFDLMP-VRNVYSWNSMISGYARH 640
            G++  A    + MP + +V +W S++     H
Sbjct: 690 AGQLGAARELLETMPFIPDVGAWGSLLGSCKTH 722



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 114/519 (21%), Positives = 216/519 (41%), Gaps = 85/519 (16%)

Query: 18  YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF--- 74
           ++V   N LI  Y     +  A  +FD  P R+ +SW  +++ Y   G  + A ++F   
Sbjct: 169 HNVISWNALITGYSDNRMIPEAKGVFDRAPGRDKISWNAMLTAYAQSGDLDSAKEVFDRT 228

Query: 75  --KEMVRAGFLLNRYALGSVL-------RACQECGPSGFKFGMQVHC----------LVL 115
             +++V    ++   A+  +L        A  +     + F +Q++           L  
Sbjct: 229 PQQDIVSCTLMIKACAVQEILGHAVEIFAAMPDRNAVSYSFMIQIYIDQGKIGEAENLSR 288

Query: 116 KSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR-DLISWNSIISVYSQRGDTISV 174
           +  Q    L +++L A     L   + ARRIF+    R D +SWN+++S Y+Q G     
Sbjct: 289 RMPQQDPTLWTSMLSAYSRHGL--VEEARRIFDRAARRDDEVSWNALLSAYAQAGHLHLA 346

Query: 175 FKLFSRMQREGFRYSLKPNEYTFGSLIT-AAYSSVLSGSYLLQQILAMVKKAGLLSDLYV 233
              F RM R         +   + +LI  +  +  L  + +L  ++          DL  
Sbjct: 347 RSTFERMPRH--------DVVAWTALIAVSGQNGQLEEAEVLYDLIPE-------RDLVA 391

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEV--------------- 278
            +AL+  +   G    +++++  M ++N VS   ++    +  EV               
Sbjct: 392 WTALIQAYGVNGKLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQARKMLDTLPDPDQ 451

Query: 279 ------------HGYLIRS-GLFDM-----VAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                       +GY+  +  +FD      V   N ++  Y+    +D ++++F  +  K
Sbjct: 452 STRTSMIVAYAQNGYIKDAREMFDSIKNPDVIACNAMMEAYSSAQMLDHAKAMFDSIKQK 511

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
             VSWNTM++   Q G  +EA   F ++    ++S N  +++   +              
Sbjct: 512 TLVSWNTMVAAYAQAGNLDEAKSIFDSIPHKNVVSHNVMIVAYAHNM---------DLAE 562

Query: 381 GEGLKLGLDSDVSVS-NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEAL 439
              +   +D   +V+  A++++ A  G L+   ++F  MP  + VSWNS+I   A     
Sbjct: 563 ARRIFYSMDEKDTVTWTAMVAMVAQHGRLAEAQELFAKMPYRNVVSWNSLIAGMASCGHG 622

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
           ++ AV+Y   MR  G  P+ +TF+ IL A S   + + G
Sbjct: 623 MA-AVRYLYVMRNEGAKPDHITFMGILIACSHVGLVEEG 660



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/314 (22%), Positives = 129/314 (41%), Gaps = 34/314 (10%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF---- 74
           DV  CN ++  Y     L  A  +FD +  +  VSW  +V+ Y   G  +EA  +F    
Sbjct: 481 DVIACNAMMEAYSSAQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIFDSIP 540

Query: 75  -KEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMY 133
            K +V    ++  YA    L   +             + +  K   T+  +V+  ++A +
Sbjct: 541 HKNVVSHNVMIVAYAHNMDLAEARRI----------FYSMDEKDTVTWTAMVA--MVAQH 588

Query: 134 GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPN 193
           G   E    A+ +F ++  R+++SWNS+I+  +  G  ++  +    M+ EG     KP+
Sbjct: 589 GRLAE----AQELFAKMPYRNVVSWNSLIAGMASCGHGMAAVRYLYVMRNEG----AKPD 640

Query: 194 EYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK 252
             TF G LI  ++  ++   +      +M    GL+        +V    R G    AR+
Sbjct: 641 HITFMGILIACSHVGLVEEGW--THFTSMQGDHGLIPWREHYCRMVDVLGRAGQLGAARE 698

Query: 253 IFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAKCGT 306
           + E M    +V +   L+   +   +V  G      L       +G    L NMY+  G 
Sbjct: 699 LLETMPFIPDVGAWGSLLGSCKTHSDVKLGTRAAESLLQFDDQSSGPYVLLANMYSSVGR 758

Query: 307 IDDSRSVFRFMIGK 320
           + D+ +V   M  +
Sbjct: 759 VADALAVRNRMKAR 772


>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
 gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
          Length = 600

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 208/574 (36%), Positives = 346/574 (60%), Gaps = 7/574 (1%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH-- 421
           L  CA    ++ G+++H   +K G  SD  ++N L+ +Y   G ++    VF  + E   
Sbjct: 31  LKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKNA 90

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           D +SWN +IGA+  +  L  EA+  +  M   G   N VT IN + A +S    + G  V
Sbjct: 91  DVISWNGIIGAYTQN-GLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIV 149

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           HA  +   + ++T +  +L++ +GKC  +D    +F  +  R++ V+WN+M++ Y  N  
Sbjct: 150 HAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLP-RKNLVTWNNMVAVYSQNWQ 208

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             KA+ +  FM   G + D  TF T++ ACA++A    G  VH     + +  DV +G+A
Sbjct: 209 CKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTA 268

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           ++  Y KCGR+D A   FD +  +N  +W+++++ YA++G+  +A+ L+ +M   G   +
Sbjct: 269 VMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVN 328

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            +TF+G+L ACSHAG   +G  +F SM + +G++P  E +  ++DLLGR+G+L   E+ I
Sbjct: 329 GITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLI 388

Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
           N MP  P+S  W  +LGAC        + G + A +++E++P+++  Y+LL+N+Y+S G+
Sbjct: 389 NSMPYEPDSSAWLALLGACRMHG--DVDRGARIAELIYELDPEDSGPYILLSNLYSSTGR 446

Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
            ++  + RKAM+   + K+ G S + +KD VH F+A  + HP+   I+ +++ L  ++++
Sbjct: 447 MDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARVKE 506

Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSA 900
           AGYV   +  L D+E E KE L+ YHSE++A+AF +++      + I+KNLRVC DCH+A
Sbjct: 507 AGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFDCHAA 566

Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            K ISK+VGR+IV+RD+ RFHHF +G CSCGDYW
Sbjct: 567 VKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 230/480 (47%), Gaps = 26/480 (5%)

Query: 257 MIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
           ++ K       L+EG+R    VH  L++ G      + N L+ MY KCG I ++RSVF  
Sbjct: 29  LLLKKCADSKALLEGKR----VHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQ 84

Query: 317 MIGK--DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
           +  K  D +SWN +I    QNG  +EA+  F  M  +G++++  +LI+ + +CASL    
Sbjct: 85  IQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEE 144

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
            G+ +H   +   L+SD  V  +L++++     +     VF  +P  + V+WN+++  ++
Sbjct: 145 EGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYS 204

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANET 494
            +     +A++ +  M   G  P+ VTF+ I+ A ++ +    G  VH  +    +  + 
Sbjct: 205 QNWQ-CKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDV 263

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
            +  A++  YGKCG +D+   IF  +  +++ V+W+++++ Y  N    +A+ L   M+Q
Sbjct: 264 ALGTAVMHFYGKCGRLDNARAIFDSLG-KKNTVTWSAILAAYAQNGYETEAIELYHEMVQ 322

Query: 555 RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA----LVDMYSKCG 610
            G  ++  TF  +L AC+       G++     +R   +F VV        L+D+  + G
Sbjct: 323 GGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIR---DFGVVPVFEHYLNLIDLLGRSG 379

Query: 611 RIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVL 669
           ++  +    + MP   +  +W +++     HG  D+   +   +    P  D   ++ + 
Sbjct: 380 QLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDP-EDSGPYILLS 438

Query: 670 SACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPN 729
           +  S  G +DE  +  K+M ++ G+  Q    S  V         D++ EF+    + P 
Sbjct: 439 NLYSSTGRMDEARRTRKAM-RLRGITKQPGLSSIEVK--------DRVHEFMAAQKLHPQ 489



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 146/271 (53%), Gaps = 15/271 (5%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNS--VSWACIVSG 60
           + K  H  ++K G+A D  + N LI +Y + G +A A  +FD++ ++N+  +SW  I+  
Sbjct: 42  EGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKNADVISWNGIIGA 101

Query: 61  YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           YT  G+  EA  +FK M   G + N+  L + + AC    PS  + G  VH + +     
Sbjct: 102 YTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASL-PSEEE-GRIVHAIAVDKRLE 159

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
            D +V   L+ M+G C ++ D AR +F+ +  ++L++WN++++VYSQ        ++F  
Sbjct: 160 SDTMVGTSLVNMFGKC-KNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRF 218

Query: 181 MQREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           M  EG    ++P+  TF ++I   AA ++   G  +   I A    +G+  D+ +G+A++
Sbjct: 219 MDLEG----VQPDAVTFLTIIDACAALAAHTEGRMVHDDITA----SGIPMDVALGTAVM 270

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
             + + G    AR IF+ + +KN V+ + ++
Sbjct: 271 HFYGKCGRLDNARAIFDSLGKKNTVTWSAIL 301



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 158/354 (44%), Gaps = 45/354 (12%)

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN--VVSMNGL------------- 268
           K G  SD  + + L+  + + G    AR +F+Q+ +KN  V+S NG+             
Sbjct: 52  KDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEA 111

Query: 269 --------MEG--------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
                   +EG                      +G+ VH   +   L     VG  LVNM
Sbjct: 112 LHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNM 171

Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
           + KC  +D +R+VF  +  K+ V+WN M++   QN   ++AI  F  M  +G+     + 
Sbjct: 172 FGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTF 231

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           ++ + +CA+L     G+ +H +    G+  DV++  A++  Y   G L     +F  + +
Sbjct: 232 LTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGK 291

Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
            + V+W++++ A+A +    +EA++ Y +M + G   NG+TF+ +L A S       G  
Sbjct: 292 KNTVTWSAILAAYAQN-GYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVD 350

Query: 481 VHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
               +I+ + V         L+   G+ G++   E +   M    D  +W +++
Sbjct: 351 YFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALL 404



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 12/182 (6%)

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           T+  +L  CA    L  G  VH+C V+     D +I + L++MY KCG I  A   FD +
Sbjct: 26  TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQI 85

Query: 623 PVRN--VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
             +N  V SWN +I  Y ++G G +AL LF  M L+G + + VT +  + AC+     +E
Sbjct: 86  QEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEE 145

Query: 681 GFKHFKSMSQVYGLIPQLEQ----FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
           G      +     +  +LE      + +V++ G+   +D      + +P   N + W  +
Sbjct: 146 G-----RIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLP-RKNLVTWNNM 199

Query: 737 LG 738
           + 
Sbjct: 200 VA 201



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/322 (20%), Positives = 141/322 (43%), Gaps = 14/322 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ ++ H   +      D  +  +L+N++ +  ++ +A  +FD +P +N V+W  +V+ Y
Sbjct: 144 EEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVY 203

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +      +A ++F+ M   G   +     +++ AC     +    G  VH  +  S    
Sbjct: 204 SQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDAC--AALAAHTEGRMVHDDITASGIPM 261

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  +   ++  YG C    D AR IF+ +  ++ ++W++I++ Y+Q G      +L+  M
Sbjct: 262 DVALGTAVMHFYGKC-GRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEM 320

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            + G    L+ N  TF  L+ A   +  S    +   ++M++  G++        L+   
Sbjct: 321 VQGG----LEVNGITFLGLLFACSHAGRSMDG-VDYFVSMIRDFGVVPVFEHYLNLIDLL 375

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG--- 296
            R G    +  +   M  +   S    + G  R  G    G  I   ++++    +G   
Sbjct: 376 GRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYI 435

Query: 297 -LVNMYAKCGTIDDSRSVFRFM 317
            L N+Y+  G +D++R   + M
Sbjct: 436 LLSNLYSSTGRMDEARRTRKAM 457


>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 750

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 240/727 (33%), Positives = 390/727 (53%), Gaps = 36/727 (4%)

Query: 224 KAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLMEGRRKGKEV- 278
           K G + +L++ S      ++ G    A + F++M    +  ++ S   L E  R+ + + 
Sbjct: 44  KQGQVENLHLVS-----LSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLS 98

Query: 279 HGYLI----RSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           HG L+    R G+ +  V + N ++ MY +CG+++D+  +F  M   ++VS  TMIS   
Sbjct: 99  HGRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYA 158

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           + G  ++A+  F  M   G    +    + L S  +   + +G+QIH   ++ GL S+ S
Sbjct: 159 EQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNAS 218

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           +   ++++Y   G+L    +VF  M     V+W  ++  +  +     +A+K ++D+   
Sbjct: 219 IETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQA-GRARDALKLFVDLITE 277

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G   +   F  +L A +S    + G Q+HA V K  +  E ++   L+  Y KC   +  
Sbjct: 278 GVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESA 337

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR---LDHFTFATVLSA 570
            + F  + E  D VSW+++ISGY       +A+    F   R +    L+ FT+ ++  A
Sbjct: 338 CRAFQEIREPND-VSWSAIISGYCQMSQFEEAVKT--FKSLRSKNAVVLNSFTYTSIFQA 394

Query: 571 CASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSW 630
           C+ +A    G +VHA  ++  L       SAL+ MYSKCG +D A   F+ M   ++ +W
Sbjct: 395 CSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAW 454

Query: 631 NSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQ 690
            + ISG+A +G+  +AL LF +M   G  P+ VTF+ VL+ACSHAGLV++G  +  +M +
Sbjct: 455 TAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLR 514

Query: 691 VYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTEL 750
            Y + P ++ + CM+D+  R+G LD+   F+  MP  P+++ W+  L  C     +  EL
Sbjct: 515 KYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTH--KNLEL 572

Query: 751 GRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKD 810
           G+ A   L +++P++   YVL  N+Y   GKWE+ A+  K M E  +KKE  CSW+  K 
Sbjct: 573 GKIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKG 632

Query: 811 GVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEK 870
            +H F+ GD+ HP+   IYEKLKE +  M   G + Q          E +E L+  HSE+
Sbjct: 633 KIHRFIVGDKHHPQSQEIYEKLKEFDGFME--GDMFQCSMT------ERREQLLD-HSER 683

Query: 871 IAVAFVLTR---NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGK 927
           +A+AF L     N++ PI++ KNLR C DCH   K +S + G EIV+RDS RFHHF +GK
Sbjct: 684 LAIAFGLISVNGNARAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGK 743

Query: 928 CSCGDYW 934
           CSC DYW
Sbjct: 744 CSCNDYW 750



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 241/521 (46%), Gaps = 54/521 (10%)

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G  NEA + F+EM +AG  ++ Y+   +  AC+E        G  +H  +    +    L
Sbjct: 60  GKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACREL--RSLSHGRLLHNRMRMGIENPSVL 117

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           + N ++ MY  C    D A ++F+E+   + +S  ++IS Y+++G       LFSRM   
Sbjct: 118 LQNCVLQMYCECGSLED-ADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLES 176

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G     KP    + +L+ +  +       + +QI A V +AGL S+  + + +V+ + + 
Sbjct: 177 GD----KPPSSMYTTLLKSLVNP--RALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKC 230

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGR-------------------------------- 272
           G    A+++F+QM  K  V+  GLM G                                 
Sbjct: 231 GWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVL 290

Query: 273 ---------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                    R GK++H  + + GL   V+VG  LV+ Y KC + + +   F+ +   + V
Sbjct: 291 KACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDV 350

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMR-RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
           SW+ +ISG  Q   +EEA+  F ++R ++ ++ ++F+  S   +C+ L    +G Q+H +
Sbjct: 351 SWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHAD 410

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
            +K  L       +AL+++Y+  G L    +VF  M   D V+W + I   A      SE
Sbjct: 411 AIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHA-YYGNASE 469

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALL 501
           A++ +  M   G  PN VTFI +L A S   + + G H +   + KYNVA      + ++
Sbjct: 470 ALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMI 529

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
             Y + G +D+  +    M    D +SW   +SG + H  L
Sbjct: 530 DIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNL 570



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 199/451 (44%), Gaps = 53/451 (11%)

Query: 20  VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
           V L N ++ +Y   G L  A KLFDEM D N+VS   ++S Y  +G+ ++A  +F  M+ 
Sbjct: 116 VLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLE 175

Query: 80  AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
           +G         ++L++     P     G Q+H  V+++    +  +   ++ MY  C   
Sbjct: 176 SGDKPPSSMYTTLLKSL--VNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWL 233

Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
              A+R+F+++  +  ++W  ++  Y+Q G      KLF  +  EG  +    + + F  
Sbjct: 234 VG-AKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEW----DSFVFSV 288

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVG------------------------- 234
           ++ A  S  L      +QI A V K GL  ++ VG                         
Sbjct: 289 VLKACAS--LEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIRE 346

Query: 235 ------SALVSGFARLGNFYYARKIFEQMIQKNVVSMN-----------GLMEGRRKGKE 277
                 SA++SG+ ++  F  A K F+ +  KN V +N            ++     G +
Sbjct: 347 PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQ 406

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VH   I+  L       + L+ MY+KCG +DD+  VF  M   D V+W   ISG    G 
Sbjct: 407 VHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGN 466

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL-KLGLDSDVSVSN 396
             EA+  F  M   G+  ++ + I+ L++C+  G +  G+      L K  +   +   +
Sbjct: 467 ASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYD 526

Query: 397 ALLSLYADAGYLSRCLKVFFLMP-EHDQVSW 426
            ++ +YA +G L   L+    MP E D +SW
Sbjct: 527 CMIDIYARSGLLDEALRFMKNMPFEPDAMSW 557



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 192/428 (44%), Gaps = 25/428 (5%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           +  H  +++ G   +  +   ++N+YV+ G L  A ++FD+M  +  V+W  ++ GYT  
Sbjct: 202 RQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQA 261

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G + +A K+F +++  G   + +    VL+AC        +FG Q+H  V K     +  
Sbjct: 262 GRARDALKLFVDLITEGVEWDSFVFSVVLKACASL--EELRFGKQIHACVAKLGLECEVS 319

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V   L+  Y  C  S + A R F+EI   + +SW++IIS Y Q        K F  ++ +
Sbjct: 320 VGTPLVDFYIKC-SSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSK 378

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
               ++  N +T+ S+  A   SVL+   +  Q+ A   K  L+   Y  SAL++ +++ 
Sbjct: 379 N---AVVLNSFTYTSIFQAC--SVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKC 433

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGR------RKGKEVHGYLIRSGLFDMVAVGNGLV 298
           G    A ++FE M   ++V+    + G        +   +   ++  G+         ++
Sbjct: 434 GCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVL 493

Query: 299 NMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
              +  G ++  +     M+ K +V+     ++ MI    ++G  +EA+     M+    
Sbjct: 494 TACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALR---FMKNMPF 550

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL-LSLYADAGYLSRCL 412
                S    LS C +   + LG +I GE L+  LD + +    L  +LY  AG      
Sbjct: 551 EPDAMSWKCFLSGCWTHKNLELG-KIAGEELR-QLDPEDTAGYVLPFNLYTWAGKWEEAA 608

Query: 413 KVFFLMPE 420
           +V  LM E
Sbjct: 609 EVMKLMNE 616



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 95/401 (23%), Positives = 167/401 (41%), Gaps = 52/401 (12%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H  + K G   +V +   L++ Y++     SA + F E+ + N VSW+ I+SGY   
Sbjct: 303 KQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQM 362

Query: 65  GMSNEACKMFKEM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
               EA K FK +  +   +LN +   S+ +AC          G QVH   +K +     
Sbjct: 363 SQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCN--IGGQVHADAIKRSLIGSQ 420

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
              + LI MY  C    D A  +FE ++  D+++W + IS ++  G+     +LF +M  
Sbjct: 421 YGESALITMYSKC-GCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVS 479

Query: 184 EGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            G    +KPN  TF +++TA   +  V  G + L     M++K  +   +     ++  +
Sbjct: 480 CG----MKPNSVTFIAVLTACSHAGLVEQGKHYLD---TMLRKYNVAPTIDHYDCMIDIY 532

Query: 242 ARLGNFYYARKIFEQM-IQKNVVSMNGLME----------GRRKGKEVH--------GYL 282
           AR G    A +  + M  + + +S    +           G+  G+E+         GY+
Sbjct: 533 ARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYV 592

Query: 283 IRSGLFD-----------MVAVGNGLVNMYAKCGTIDDSRSVFRFMIG-KDSVSWNTMIS 330
           +   L+            M  +   ++     C  I +   + RF++G K       +  
Sbjct: 593 LPFNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYE 652

Query: 331 GLDQNGCYEEAIMNFCAM--RRDGLMSSN------FSLIST 363
            L +   + E  M  C+M  RR+ L+  +      F LIS 
Sbjct: 653 KLKEFDGFMEGDMFQCSMTERREQLLDHSERLAIAFGLISV 693


>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 231/678 (34%), Positives = 358/678 (52%), Gaps = 40/678 (5%)

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           +G  L+ +    G  + +R +F  +   D  + +T+IS L  +G   EAI  + +++  G
Sbjct: 100 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 159

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
           +       ++   +CA  G  +  +++H +  + G+ SDV V NAL+  Y     +    
Sbjct: 160 IKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGAR 219

Query: 413 KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
           +VF  +   D VSW S+   +        + +  + +M  +G  PN +T  +IL A +  
Sbjct: 220 RVFDDLVVRDVVSWTSLSSCYVKC-GFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL 278

Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
              K G ++H   +++ +     + +AL+S Y KC  + +   +F  M  R D VSWN +
Sbjct: 279 KDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNGV 337

Query: 533 ISGYIHNELLPKAMNLVWFMMQRGQRLDH------------------------------- 561
           ++ Y  N+   K  +L   M + G R D                                
Sbjct: 338 LTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGF 397

Query: 562 ----FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
                T +++L AC+    L  G E+H    R     D+   +AL+ MY+KCG ++ +  
Sbjct: 398 KPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRN 457

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGL 677
            FD+M  ++V +WN+MI   A HG+G +AL LF +M L    P+ VTF GVLS CSH+ L
Sbjct: 458 VFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRL 517

Query: 678 VDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
           V+EG + F SM + + + P    +SC+VD+  RAG L++  +FI  MP+ P +  W  +L
Sbjct: 518 VEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALL 577

Query: 738 GACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEV 797
            AC     +  EL + +A  LFE+EP N  NYV L N+  +   W + ++ R  MKE  +
Sbjct: 578 AAC--RVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGI 635

Query: 798 KKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEP 857
            K  GCSW+ + + VH FV GD+S+ E D IY  L EL +KM+ AGY P T + L D++ 
Sbjct: 636 TKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQ 695

Query: 858 ESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRD 916
           E K + +  HSEK+AVAF +L  N +  IR+ KNLR+CGDCH+A K++SK+VG  IV+RD
Sbjct: 696 EEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRD 755

Query: 917 SNRFHHFNDGKCSCGDYW 934
           S RFHHF +G CSC D W
Sbjct: 756 SLRFHHFKNGNCSCKDLW 773



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 240/514 (46%), Gaps = 42/514 (8%)

Query: 26  LINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLN 85
           LI V + VGD   A +LFD +P  +  + + ++S  T  G+SNEA K++  +   G    
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGI--- 160

Query: 86  RYALGSVLRACQECGPSGFKFGM-QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCAR 144
           +  +   L A + C  SG    + +VH    +     D  V N LI  YG C +  + AR
Sbjct: 161 KPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKC-KCVEGAR 219

Query: 145 RIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA 204
           R+F+++  RD++SW S+ S Y + G       +F  M   G    +KPN  T  S++ A 
Sbjct: 220 RVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSG----VKPNPMTVSSILPAC 275

Query: 205 --YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
                + SG    ++I     + G++ +L+V SALVS +A+  +   AR +F+ M  ++V
Sbjct: 276 AELKDLKSG----KEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDV 331

Query: 263 VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
           VS NG++    K KE   Y     LF                  +  SR   R     D 
Sbjct: 332 VSWNGVLTAYFKNKE---YEKGFSLF------------------LKMSRDGVR----ADE 366

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
            +WN +I G  +NG  EEA+  F  M++ G   +  ++ S L +C+    + +G++IH  
Sbjct: 367 ATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCY 426

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
             +     D++ + ALL +YA  G L+    VF +M   D V+WN++I A A       E
Sbjct: 427 VFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANA-MHGNGKE 485

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALL 501
           A+  +  M  +   PN VTF  +L+  S   + + G Q+   + + + V  +    + ++
Sbjct: 486 ALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVV 545

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             Y + G +++  K    M       +W ++++ 
Sbjct: 546 DIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 579



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 230/490 (46%), Gaps = 64/490 (13%)

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           R+ F    +P+  T  +LI+A  +  LS   +  +I + +++ G+  D+ V  A     A
Sbjct: 118 RQLFDNIPQPDPTTCSTLISALTTHGLSNEAI--KIYSSLQERGIKPDMPVFLAAAKACA 175

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
                               VS + L     + KEVH    R G+   V VGN L++ Y 
Sbjct: 176 --------------------VSGDAL-----RVKEVHDDATRCGVMSDVFVGNALIHAYG 210

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIS 362
           KC  ++ +R VF  ++ +D VSW ++ S   + G   + +  F  M   G+  +  ++ S
Sbjct: 211 KCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSS 270

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
            L +CA L  +  G++IHG  ++ G+  ++ V +AL+SLYA    +     VF LMP  D
Sbjct: 271 ILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRD 330

Query: 423 QVSWNSVIGAF-------------------------ADSEALV---------SEAVKYYL 448
            VSWN V+ A+                         A   A++          EAV+ + 
Sbjct: 331 VVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFR 390

Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
            M++ G+ PN +T  +IL A S     ++G ++H  V ++    + T   ALL  Y KCG
Sbjct: 391 KMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCG 450

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
           +++    +F  M  R+D V+WN+MI     +    +A+ L   M+    + +  TF  VL
Sbjct: 451 DLNLSRNVFDMM-RRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVL 509

Query: 569 SACASVATLERGMEV-HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           S C+    +E G+++ ++ G    +E D    S +VD+YS+ GR++ A +F   MP+   
Sbjct: 510 SGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPT 569

Query: 628 YS-WNSMISG 636
            S W ++++ 
Sbjct: 570 ASAWGALLAA 579



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 117/506 (23%), Positives = 213/506 (42%), Gaps = 105/506 (20%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H    + G   DVF+ N LI+ Y +   +  A ++FD++  R+ VSW  + S Y   
Sbjct: 184 KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKC 243

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   +   +F+EM  +G   N   + S+L AC E      K G ++H   ++     +  
Sbjct: 244 GFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL--KDLKSGKEIHGFAVRHGMVVNLF 301

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V + L+++Y  CL   + AR +F+ +  RD++SWN +++ Y +  +    F LF +M R+
Sbjct: 302 VCSALVSLYAKCLSVRE-ARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRD 360

Query: 185 GFR-------------------------------YSLKPNEYTFGSLITA-AYSSVLSGS 212
           G R                                  KPNE T  S++ A ++S  L   
Sbjct: 361 GVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLR-- 418

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR 272
            + ++I   V +   + DL   +AL+  +A+ G+   +R +F+ M +K+VV+ N ++   
Sbjct: 419 -MGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMI--- 474

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
                +H              GNG   ++     + D   + R  +  +SV++  ++SG 
Sbjct: 475 -IANAMH--------------GNGKEALF-----LFDKMLLSR--VQPNSVTFTGVLSGC 512

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
             +   EE +  F +M RD L                                  ++ D 
Sbjct: 513 SHSRLVEEGVQIFNSMGRDHL----------------------------------VEPDA 538

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA---FADSE-ALVSEAVKYY 447
           +  + ++ +Y+ AG L+   K    MP E    +W +++ A   + + E A +S    + 
Sbjct: 539 NHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFE 598

Query: 448 LDMRRAGWSPNGVTFINILAAASSFS 473
           ++    G   N V+  NIL  A  +S
Sbjct: 599 IEPNNPG---NYVSLFNILVTAKMWS 621



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 131/307 (42%), Gaps = 51/307 (16%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H   ++HG   ++F+C+ L+++Y +   +  A  +FD MP R+ VSW  +++ Y
Sbjct: 282 KSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAY 341

Query: 62  -----------------------------------THKGMSNEACKMFKEMVRAGFLLNR 86
                                                 G S EA +MF++M + GF  N 
Sbjct: 342 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNE 401

Query: 87  YALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRI 146
             + S+L AC        + G ++HC V +  +  D   +  L+ MY  C +  + +R +
Sbjct: 402 ITISSILPACS--FSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGD-LNLSRNV 458

Query: 147 FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS 206
           F+ +  +D+++WN++I   +  G+      LF +M        ++PN  TF  +++    
Sbjct: 459 FDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKM----LLSRVQPNSVTFTGVLSGC-- 512

Query: 207 SVLSGSYLLQQILAMVKKAG----LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
              S S L+++ + +    G    +  D    S +V  ++R G    A K  + M  +  
Sbjct: 513 ---SHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPT 569

Query: 263 VSMNGLM 269
            S  G +
Sbjct: 570 ASAWGAL 576


>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 783

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 247/738 (33%), Positives = 389/738 (52%), Gaps = 50/738 (6%)

Query: 111 HCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD 170
           H   + S    D  ++N+L+  Y S L     ARR+F+ + +R+L+SW S IS+Y+Q G 
Sbjct: 53  HARAVVSGLLPDLFLANLLLRGY-SKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGR 111

Query: 171 TISVFKLFSRMQREGFRYS--LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL 228
                 LF+     G        PNE+   S + A   S    +   +Q+  +  K GL 
Sbjct: 112 EDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQS--RAARFGEQVHGVAAKLGLD 169

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------------- 274
           ++++VG+ALV+ +A+ G    A  +F+ +  +N V+   ++ G  +              
Sbjct: 170 ANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRM 229

Query: 275 ---------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTI 307
                                      G+++HGY  R+      +V N L+++Y KC  +
Sbjct: 230 GLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRL 289

Query: 308 DDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
             +R +F  M  ++ VSW TMI+G  QN    EA+  F  + + G     F+  S L+SC
Sbjct: 290 LLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSC 349

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
            SL  I  G+Q+H   +K  L+SD  V NAL+ +YA   +L+    VF  + E D +S+N
Sbjct: 350 GSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYN 409

Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
           ++I  +A    L   AV+ +  MR     P+ +TF+++L  +SS S  +L  Q+H  ++K
Sbjct: 410 AMIEGYARLGDLTG-AVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVK 468

Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
              + +    +AL+  Y K   +DD + +F+ M + RD V WN+MI G   NE   +A+ 
Sbjct: 469 SGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLM-QNRDMVIWNAMIFGLAQNERGEEAVK 527

Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYS 607
           L   +   G   + FTF  +++  +++A++  G + HA  ++A  + D  I +AL+DMY+
Sbjct: 528 LFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYA 587

Query: 608 KCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVG 667
           KCG I+     F+    ++V  WNSMIS YA+HGH ++AL +F  M+  G  P++VTFV 
Sbjct: 588 KCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVS 647

Query: 668 VLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPIT 727
           VLSAC+HAGLVDEG  HF SM   Y + P  E ++ +V+L GR+G+L   +EFI +MPI 
Sbjct: 648 VLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIE 707

Query: 728 PNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAK 787
           P + IWR++L AC        E+GR A  M    +P ++   VL++N+YAS G W D  K
Sbjct: 708 PVATIWRSLLSACHLFG--NVEIGRYATEMALLADPADSGPSVLMSNIYASKGLWADAQK 765

Query: 788 ARKAMKEAEVKKEAGCSW 805
            R+ M  A V KE G SW
Sbjct: 766 LRQGMDCAGVVKEPGYSW 783



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 193/680 (28%), Positives = 325/680 (47%), Gaps = 66/680 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H + +  G   D+FL N L+  Y ++G L  A +LFD MP RN VSW   +S Y   G  
Sbjct: 53  HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGRE 112

Query: 68  NEACKMFKEMVRAGFL------LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           ++A  +F     AG         N + L S LRAC +   +  +FG QVH +  K     
Sbjct: 113 DDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAA--RFGEQVHGVAAKLGLDA 170

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           +  V   L+ +Y       D A  +F+ +  R+ ++W ++I+ YSQ G      +LF RM
Sbjct: 171 NVFVGTALVNLYAKA-GRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRM 229

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ---QILAMVKKAGLLSDLYVGSALV 238
             +G R    P+ +     + A+ +S  SG   ++   QI     +    SD  V +AL+
Sbjct: 230 GLDGVR----PDRF-----VLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALI 280

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR------------------------- 273
             + +      AR++F+ M  +N+VS   ++ G                           
Sbjct: 281 DLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVF 340

Query: 274 ----------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
                           +G++VH ++I++ L     V N L++MYAKC  + ++R+VF  +
Sbjct: 341 ACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEAL 400

Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
              D++S+N MI G  + G    A+  F  MR   L  S  + +S L   +S   + L +
Sbjct: 401 AEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSK 460

Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
           QIHG  +K G   D+   +AL+ +Y+    +     VF LM   D V WN++I   A +E
Sbjct: 461 QIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNE 520

Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
               EAVK +  +R +G +PN  TF+ ++  AS+ +    G Q HAQ+IK    ++  I 
Sbjct: 521 R-GEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHIS 579

Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ 557
           NAL+  Y KCG +++   +F   +  +D + WNSMIS Y  +    +A+++   M   G 
Sbjct: 580 NALIDMYAKCGFIEEGRLLF-ESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGV 638

Query: 558 RLDHFTFATVLSACASVATLERGM-EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
             ++ TF +VLSACA    ++ G+   ++   +  +E      +++V+++ + G++  A 
Sbjct: 639 EPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAK 698

Query: 617 RFFDLMPVRNVYS-WNSMIS 635
            F + MP+  V + W S++S
Sbjct: 699 EFIERMPIEPVATIWRSLLS 718



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/430 (31%), Positives = 224/430 (52%), Gaps = 15/430 (3%)

Query: 272 RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
           RR     H   + SGL   + + N L+  Y+K G + D+R +F  M  ++ VSW + IS 
Sbjct: 46  RRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISM 105

Query: 332 LDQNGCYEEAIMNFCAMRR------DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
             Q+G  ++A++ F A         DG   + F L S L +CA       G+Q+HG   K
Sbjct: 106 YAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAK 165

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
           LGLD++V V  AL++LYA AG +   + VF  +P  + V+W +VI  ++ +      A++
Sbjct: 166 LGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQA-GQAGVALE 224

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
            +  M   G  P+     +  +A S     + G Q+H    +    ++ ++ NAL+  Y 
Sbjct: 225 LFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYC 284

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
           KC  +    ++F  M E R+ VSW +MI+GY+ N L  +AM++ W + Q G + D F   
Sbjct: 285 KCSRLLLARRLFDSM-ENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACT 343

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           ++L++C S+A + +G +VHA  ++A LE D  + +AL+DMY+KC  +  A   F+ +   
Sbjct: 344 SILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAED 403

Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
           +  S+N+MI GYAR G    A+ +F +M+     P  +TFV +L        V       
Sbjct: 404 DAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLG-------VSSSRSDL 456

Query: 686 KSMSQVYGLI 695
           +   Q++GLI
Sbjct: 457 ELSKQIHGLI 466



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 125/263 (47%), Gaps = 10/263 (3%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           +K  H  I+K G + D++  + LI+VY +   +  A  +F  M +R+ V W  ++ G   
Sbjct: 459 SKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQ 518

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                EA K+F  +  +G   N +   +++        +    G Q H  ++K+    D 
Sbjct: 519 NERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTL--ASIFHGQQFHAQIIKAGADSDP 576

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            +SN LI MY  C    +  R +FE    +D+I WNS+IS Y+Q G       +F  M+ 
Sbjct: 577 HISNALIDMYAKC-GFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEG 635

Query: 184 EGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
            G    ++PN  TF S+++A A++ ++     L    +M  K  +       +++V+ F 
Sbjct: 636 AG----VEPNYVTFVSVLSACAHAGLVDEG--LHHFNSMKTKYAVEPGTEHYASVVNLFG 689

Query: 243 RLGNFYYARKIFEQMIQKNVVSM 265
           R G  + A++  E+M  + V ++
Sbjct: 690 RSGKLHAAKEFIERMPIEPVATI 712


>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
 gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 219/584 (37%), Positives = 342/584 (58%), Gaps = 18/584 (3%)

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL---SLYADAGYLSRCLKVF 415
           SL+S L  C SL  +   +QI    +K  L +D+ +   L+   +       +    ++F
Sbjct: 28  SLLSCLPKCTSLKEL---KQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLF 84

Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA---ASSF 472
             +P+ D V +NS+   ++ S A + +A+  ++        P+  TF ++L A   A +F
Sbjct: 85  EAIPQPDIVLFNSMFRGYSRSNAPL-KAISLFIKALNYNLLPDDYTFPSLLKACVVAKAF 143

Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
             GK   Q+H   IK  +     +   L++ Y  C ++D  +++F  + E    VS+N++
Sbjct: 144 QQGK---QLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPC-VVSYNAI 199

Query: 533 ISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL 592
           I+GY  +    +A++L   +  R  + +  T  +VLS+CA +  L+ G  +H    +  L
Sbjct: 200 ITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGL 259

Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
           +  V + +AL+DMY+KCG +D A   F+ M VR+  +W++MI  YA HG G   +++F +
Sbjct: 260 DKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEE 319

Query: 653 MKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG 712
           M      PD +TF+G+L ACSH GLVDEGF++F SMS+VYG+IP ++ + CMVDLLGRAG
Sbjct: 320 MARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAG 379

Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLL 772
            L +  +FI+++PI P  ++WRT+L +C  ++    EL ++  N + E++  +  +YV+L
Sbjct: 380 LLHEAYKFIDELPIKPTPILWRTLLSSC--SSHGNLELAKQVMNQILELDDSHGGDYVIL 437

Query: 773 ANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKL 832
           +N+ A  GKWEDV   RK M      K  GCS + + + VH F +GD  H     ++  L
Sbjct: 438 SNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRAL 497

Query: 833 KELNQKMRDAGYVPQTKFALF-DLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKN 890
            EL ++++  GYVP T   +  D+E E KE  + YHSEK+A++F +L       IR++KN
Sbjct: 498 DELVKELKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKN 557

Query: 891 LRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           LRVCGDCHSA K IS ++ REI+LRD  RFHHF DGKCSCGDYW
Sbjct: 558 LRVCGDCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/389 (23%), Positives = 182/389 (46%), Gaps = 13/389 (3%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT---IDDSRSVFRFMIGKDSVSWNTMI 329
           ++ K++  + I++ L + + +   L+N   +  T   +D +  +F  +   D V +N+M 
Sbjct: 40  KELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIPQPDIVLFNSMF 99

Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
            G  ++    +AI  F       L+  +++  S L +C        G+Q+H   +KLGL+
Sbjct: 100 RGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLN 159

Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
            +  V   L+++YA    +    +VF  + E   VS+N++I  +A S +  +EA+  +  
Sbjct: 160 ENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARS-SRPNEALSLFRQ 218

Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
           ++     PN VT +++L++ +      LG  +H  V K  +     +  AL+  Y KCG 
Sbjct: 219 LQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGS 278

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
           +D    +F  MS  RD  +W++MI  Y  +      M++   M +   + D  TF  +L 
Sbjct: 279 LDGAISVFESMS-VRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLY 337

Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVR 625
           AC+    ++ G             + ++ G      +VD+  + G +  A +F D +P++
Sbjct: 338 ACSHTGLVDEGFRYFYSMSEV---YGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIK 394

Query: 626 NV-YSWNSMISGYARHGHGDKALTLFSQM 653
                W +++S  + HG+ + A  + +Q+
Sbjct: 395 PTPILWRTLLSSCSSHGNLELAKQVMNQI 423



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 156/355 (43%), Gaps = 56/355 (15%)

Query: 127 NVLIAMYGSCLE-----STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
            +L  +  SC +     S D A ++FE I   D++ +NS+   YS+    +    LF + 
Sbjct: 59  QILTKLINSCTQNPTTASMDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIK- 117

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL-QQILAMVKKAGLLSDLYVGSALVSG 240
                 Y+L P++YTF SL+ A    V++ ++   +Q+  +  K GL  + YV   L++ 
Sbjct: 118 ---ALNYNLLPDDYTFPSLLKAC---VVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINM 171

Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------- 274
           +A   +   A+++F+++++  VVS N ++ G  +                          
Sbjct: 172 YAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTV 231

Query: 275 ---------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
                          GK +H Y+ ++GL   V V   L++MYAKCG++D + SVF  M  
Sbjct: 232 LSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSV 291

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-QQ 378
           +D+ +W+ MI     +G  ++ +  F  M R  +     + +  L +C+  G +  G + 
Sbjct: 292 RDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRY 351

Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            +      G+   +     ++ L   AG L    K    +P +   + W +++ +
Sbjct: 352 FYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSS 406



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 179/397 (45%), Gaps = 42/397 (10%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLAS---ASKLFDEMPDRNSVSWACIVSGYTHKGMSN 68
           +K     D+ +   LIN   +    AS   A +LF+ +P  + V +  +  GY+      
Sbjct: 50  IKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPL 109

Query: 69  EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV 128
           +A  +F + +    L + Y   S+L+AC       F+ G Q+HCL +K     +  V   
Sbjct: 110 KAISLFIKALNYNLLPDDYTFPSLLKAC--VVAKAFQQGKQLHCLAIKLGLNENPYVCPT 167

Query: 129 LIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRY 188
           LI MY  C    D A+R+F+EI    ++S+N+II+ Y++         LF ++Q      
Sbjct: 168 LINMYAGC-NDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQAR---- 222

Query: 189 SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
            LKPN+ T  S++++   ++L    L + I   VKK GL   + V +AL+  +A+ G+  
Sbjct: 223 KLKPNDVTVLSVLSSC--ALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLD 280

Query: 249 YARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGY---LIRSGLFDMVAVGNGLVNMYA 302
            A  +FE M  ++  + + ++       +G++V      + R+ +        GL+   +
Sbjct: 281 GAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACS 340

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI- 361
             G +D+    FR+      V    +I G+   GC  +       + R GL+   +  I 
Sbjct: 341 HTGLVDEG---FRYFYSMSEVY--GIIPGIKHYGCMVD------LLGRAGLLHEAYKFID 389

Query: 362 ------------STLSSCASLGWIMLGQQIHGEGLKL 386
                       + LSSC+S G + L +Q+  + L+L
Sbjct: 390 ELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILEL 426



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 149/333 (44%), Gaps = 24/333 (7%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H   +K G   + ++C TLIN+Y    D+  A ++FDE+ +   VS+  I++GY
Sbjct: 144 QQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGY 203

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                 NEA  +F+++       N   + SVL +C   G      G  +H  V K+    
Sbjct: 204 ARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLG--ALDLGKWIHEYVKKNGLDK 261

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V+  LI MY  C  S D A  +FE +  RD  +W+++I  Y+  G    V  +F  M
Sbjct: 262 YVKVNTALIDMYAKC-GSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEM 320

Query: 182 QREGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
            R      ++P+E TF G L   +++ ++   +  +   +M +  G++  +     +V  
Sbjct: 321 ARA----KVQPDEITFLGLLYACSHTGLVDEGF--RYFYSMSEVYGIIPGIKHYGCMVDL 374

Query: 241 FARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVHGYL-----IRSGLFDMVAVG 294
             R G  + A K  +++ I+   +    L+         HG L     + + + ++    
Sbjct: 375 LGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSS----HGNLELAKQVMNQILELDDSH 430

Query: 295 NG----LVNMYAKCGTIDDSRSVFRFMIGKDSV 323
            G    L N+ A+ G  +D  ++ + MI K +V
Sbjct: 431 GGDYVILSNLCARAGKWEDVDTLRKLMIHKGAV 463


>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 222/579 (38%), Positives = 335/579 (57%), Gaps = 12/579 (2%)

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL---SLYADAGYLSRCLKVFFL 417
           +S L  C SL  +   +Q+    +K  L SD+SV    +   SL      +     +F  
Sbjct: 24  LSLLPKCTSLREL---KQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQ 80

Query: 418 MPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
           +P+ D V +N++   +A ++  +  A   +  +  +G  P+  TF ++L A +S    + 
Sbjct: 81  IPQPDIVLFNTMARGYARTDTPL-RAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEE 139

Query: 478 GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI 537
           G Q+H   IK  ++    +   L++ Y  C EMD   ++F ++ E    V++N+MI+GY 
Sbjct: 140 GRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPC-VVTYNAMITGYA 198

Query: 538 HNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
                 +A++L   +  R  +    T  +VLS+CA +  L+ G  +H    +      V 
Sbjct: 199 RGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVK 258

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
           + +AL+DMY+KCG +D A   F+ M VR+  +W++MI  YA HGHG KA++LF +M+  G
Sbjct: 259 VDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAG 318

Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
             PD +TF+G+L ACSH GLV+EGF++F  M   YG+IP ++ + CMVDLLGRAG L++ 
Sbjct: 319 TEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEA 378

Query: 718 EEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYA 777
            EFI  +PI P  ++WRT+L AC   +    ELG++    +FE++  +  +Y++L+N+ A
Sbjct: 379 YEFIVGLPIRPTPILWRTLLSAC--GSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCA 436

Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
             G+WEDV   RK M E  V K  GCS V + + VH F +GD  H     +++ L EL +
Sbjct: 437 RAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVK 496

Query: 838 KMRDAGYVPQTKFALF-DLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCG 895
           +++  GYVP T      D+E E KE  + YHSEK+A+ F +L       IR++KNLRVCG
Sbjct: 497 ELKLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCG 556

Query: 896 DCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           DCHSA K IS I  R+I+LRD  RFHHF DGKCSC DYW
Sbjct: 557 DCHSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 152/323 (47%), Gaps = 22/323 (6%)

Query: 229 SDLYVGSALVSGFARLGNFYYARKIFEQMI--------------QKNVVSMNGLMEGRRK 274
            D+ + + +  G+AR      A  +F Q++               K   S   L EGR  
Sbjct: 84  PDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGR-- 141

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
             ++H   I+ GL + V V   L+NMY  C  +D +R VF  +     V++N MI+G  +
Sbjct: 142 --QLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYAR 199

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
                EA+  F  ++   L  ++ +++S LSSCA LG + LG+ +H    K G +  V V
Sbjct: 200 GSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKV 259

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA-DSEALVSEAVKYYLDMRRA 453
             AL+ +YA  G L   + VF  M   D  +W+++I A+A     L  +AV  + +MR+A
Sbjct: 260 DTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGL--KAVSLFKEMRKA 317

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           G  P+ +TF+ +L A S   + + G +  +    KY V         ++   G+ G +++
Sbjct: 318 GTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEE 377

Query: 513 CEKIFARMSERRDEVSWNSMISG 535
             +    +  R   + W +++S 
Sbjct: 378 AYEFIVGLPIRPTPILWRTLLSA 400



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 107/453 (23%), Positives = 206/453 (45%), Gaps = 47/453 (10%)

Query: 36  LASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRA 95
           +  A  LFD++P  + V +  +  GY        A  +F +++ +G   + Y   S+L+A
Sbjct: 71  MQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKA 130

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDL 155
           C  C     + G Q+HCL +K   + +  V   LI MY +C E  DCARR+F++I    +
Sbjct: 131 CASC--KALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNE-MDCARRVFDKIWEPCV 187

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL 215
           +++N++I+ Y++         LF  +Q      +LKP + T  S++++   ++L    L 
Sbjct: 188 VTYNAMITGYARGSRPNEALSLFRELQAR----NLKPTDVTMLSVLSSC--ALLGALDLG 241

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG 275
           + +   VKK G    + V +AL+  +A+ G+   A  +FE M  ++  + + ++      
Sbjct: 242 KWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMI----MA 297

Query: 276 KEVHGYLIRS-GLF-DMVAVGN--------GLVNMYAKCGTIDDSRSVFRFMIGKDSV-- 323
             +HG+ +++  LF +M   G         GL+   +  G +++    F  M  K  V  
Sbjct: 298 YAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIP 357

Query: 324 ---SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
               +  M+  L + G  EEA      +    +  +     + LS+C S G + LG+++ 
Sbjct: 358 GIKHYGCMVDLLGRAGRLEEAYEFIVGL---PIRPTPILWRTLLSACGSHGNVELGKRVI 414

Query: 381 GEGLKLGLDSD----VSVSN--ALLSLYADAGYLSRCL--KVFFLMPEHDQVSWNSVIGA 432
            +  +L  DS     + +SN  A    + D  Y+ + +  +    +P    V  N+V+  
Sbjct: 415 EQIFELD-DSHGGDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHE 473

Query: 433 FADSEALVSEAVKYYL-------DMRRAGWSPN 458
           F   + + S + K +        +++  G+ PN
Sbjct: 474 FFSGDGVHSVSTKLHQALDELVKELKLVGYVPN 506



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 114/247 (46%), Gaps = 10/247 (4%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ +  H   +K G + +V++C TLIN+Y    ++  A ++FD++ +   V++  +++GY
Sbjct: 138 EEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGY 197

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                 NEA  +F+E+           + SVL +C   G      G  +H  V K+    
Sbjct: 198 ARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLG--ALDLGKWMHEYVKKNGFNR 255

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
              V   LI MY  C  S D A  +FE +  RD  +W+++I  Y+  G  +    LF  M
Sbjct: 256 FVKVDTALIDMYAKC-GSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEM 314

Query: 182 QREGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
           ++ G     +P+E TF G L   +++ ++   +  +    M  K G++  +     +V  
Sbjct: 315 RKAG----TEPDEITFLGLLYACSHTGLVEEGF--EYFYGMRDKYGVIPGIKHYGCMVDL 368

Query: 241 FARLGNF 247
             R G  
Sbjct: 369 LGRAGRL 375


>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
 gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
          Length = 635

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 222/550 (40%), Positives = 318/550 (57%), Gaps = 9/550 (1%)

Query: 390 SDVSVSNALLSLYADAGY-LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           +DV   N L++    +   L+    +F  MP  D  SW++++ A A      +    Y  
Sbjct: 90  TDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRR 149

Query: 449 DMRRAGWS--PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
            +R  G +   N  T  + LAAA++    + G ++H  V++  +  +  + +AL   Y K
Sbjct: 150 MLREPGSAGVDNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAK 209

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
           CG +DD   +F RM  R D VSW +M+  Y       +   L   M++ G + + FT+A 
Sbjct: 210 CGRVDDARSVFDRMPVR-DVVSWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAG 268

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           VL ACA   + + G +VH    ++         SALV MYSK G +  A R F  MP  +
Sbjct: 269 VLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLD 328

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
           + SW +MISGYA++G  D+AL  F  +   G  PDHVTFVGVLSAC+HAGLVD+G   F 
Sbjct: 329 LVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFH 388

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANC 745
           S+   YG+    + ++C++DLL R+G  ++ EE IN M + PN  +W ++LG C    N 
Sbjct: 389 SIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNV 448

Query: 746 RKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSW 805
           R   L R AA  LFE+EP+N   YV LAN+YAS G +++V   R+ M+   + K    SW
Sbjct: 449 R---LARWAAEALFEIEPENPATYVTLANIYASVGLFDEVENTRRIMELKGITKMPASSW 505

Query: 806 VTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVS 865
           + +   +HVF+ GD+ HP+ + +Y  LK+L  KMR+ GYV  T F L D+E E K+  + 
Sbjct: 506 IEVGTRMHVFLVGDKLHPQAEQVYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIG 565

Query: 866 YHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFN 924
           YHSE++AVAF +    K  PI++ KNLR+CGDCH+  K ISKIV REI++RDSNRFHHF 
Sbjct: 566 YHSERLAVAFGIIATPKGAPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFK 625

Query: 925 DGKCSCGDYW 934
           +G CSC DYW
Sbjct: 626 NGSCSCRDYW 635



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 153/320 (47%), Gaps = 15/320 (4%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKN-------------VVSMNGLMEGRRKGK 276
           D +  SA+VS  AR G    A  I+ +M+++               ++        R G+
Sbjct: 123 DHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSALAAATAARCARAGR 182

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           E+H +++R G+     V + L +MYAKCG +DD+RSVF  M  +D VSW  M+       
Sbjct: 183 ELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDAR 242

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
              E    F  M R G+  + F+    L +CA      LG+Q+HG   K          +
Sbjct: 243 RDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAES 302

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           AL+ +Y+  G +   ++VF  MP+ D VSW ++I  +A +     EA++Y+  + R+G  
Sbjct: 303 ALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQN-GQPDEALRYFDMLLRSGCR 361

Query: 457 PNGVTFINILAAASSFSMGKLGHQV-HAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
           P+ VTF+ +L+A +   +   G  + H+   +Y + +       ++    + G  +  E+
Sbjct: 362 PDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEE 421

Query: 516 IFARMSERRDEVSWNSMISG 535
           +   MS + ++  W S++ G
Sbjct: 422 MINTMSVKPNKFLWASLLGG 441



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 158/361 (43%), Gaps = 46/361 (12%)

Query: 114 VLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTIS 173
           +L S  + D    N L+A  G        AR +F+ +  RD  SW++I+S +++ G   +
Sbjct: 83  LLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHARHGQPRA 142

Query: 174 VFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYV 233
              ++ RM RE     +  NE  F +    A ++    +   +++   V + G+ +D  V
Sbjct: 143 ALAIYRRMLREPGSAGVD-NE--FTASSALAAATAARCARAGRELHCHVVRRGIDADAVV 199

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME----GRRKG-------------- 275
            SAL   +A+ G    AR +F++M  ++VVS   ++E     RR G              
Sbjct: 200 WSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLRSGI 259

Query: 276 -----------------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
                                  K+VHG + +S   D     + LV+MY+K G +  +  
Sbjct: 260 QPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVR 319

Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
           VFR M   D VSW  MISG  QNG  +EA+  F  + R G    + + +  LS+CA  G 
Sbjct: 320 VFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGL 379

Query: 373 IMLGQQI-HGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI 430
           +  G  I H    + G++        ++ L + +G   R  ++   M  + ++  W S++
Sbjct: 380 VDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLL 439

Query: 431 G 431
           G
Sbjct: 440 G 440



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 160/348 (45%), Gaps = 24/348 (6%)

Query: 9   LQILKHGFAYDVFLCNTLINVYVRVGD-LASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           L +L    + DV   NTL+    R    LASA  LFD MP R+  SW+ IVS +   G  
Sbjct: 81  LALLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHARHGQP 140

Query: 68  NEACKMFKEMVR---AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
             A  +++ M+R   +  + N +   S L A         + G ++HC V++     D +
Sbjct: 141 RAALAIYRRMLREPGSAGVDNEFTASSALAAATAA--RCARAGRELHCHVVRRGIDADAV 198

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V + L  MY  C    D AR +F+ +  RD++SW +++  Y         F+LF RM R 
Sbjct: 199 VWSALADMYAKC-GRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLRS 257

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G    ++PNE+T+  ++ A   +  +   L +Q+   + K+      +  SALV  +++ 
Sbjct: 258 G----IQPNEFTYAGVLRAC--AEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKY 311

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVH------GYLIRSGLFDMVAVGNGLV 298
           G+   A ++F  M + ++VS   ++ G  +  +          L+RSG         G++
Sbjct: 312 GDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVL 371

Query: 299 NMYAKCGTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEA 341
           +  A  G +D   S+F      + I   +  +  +I  L ++G +E A
Sbjct: 372 SACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERA 419



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 141/320 (44%), Gaps = 20/320 (6%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +++ G   D  + + L ++Y + G +  A  +FD MP R+ VSW  +V  Y     
Sbjct: 184 LHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDARR 243

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             E  ++F  M+R+G   N +    VLRAC E   +  K G QVH  + KS         
Sbjct: 244 DGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEF--TSEKLGKQVHGRMTKSRAGDSCFAE 301

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L+ MY S       A R+F  +   DL+SW ++IS Y+Q G      + F  + R G 
Sbjct: 302 SALVHMY-SKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGC 360

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVK-KAGL--LSDLYVGSALVSGFAR 243
           R    P+  TF  +++A   + L    L   I   +K + G+   +D Y  + ++   +R
Sbjct: 361 R----PDHVTFVGVLSACAHAGLVDKGL--SIFHSIKDEYGIEHTADHY--ACVIDLLSR 412

Query: 244 LGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDM----VAVGNGL 297
            G F  A ++   M ++ N      L+ G R  K V         LF++     A    L
Sbjct: 413 SGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEPENPATYVTL 472

Query: 298 VNMYAKCGTIDDSRSVFRFM 317
            N+YA  G  D+  +  R M
Sbjct: 473 ANIYASVGLFDEVENTRRIM 492



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H ++ K       F  + L+++Y + GD+ +A ++F  MP  + VSW  ++SGY
Sbjct: 280 KLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGY 339

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G  +EA + F  ++R+G   +      VL AC   G
Sbjct: 340 AQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAG 378


>gi|115486035|ref|NP_001068161.1| Os11g0583200 [Oryza sativa Japonica Group]
 gi|113645383|dbj|BAF28524.1| Os11g0583200 [Oryza sativa Japonica Group]
          Length = 703

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 240/617 (38%), Positives = 348/617 (56%), Gaps = 16/617 (2%)

Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
           LVN+Y+K      + +          VS+   ISG  Q+G    A+  F  M R GL  +
Sbjct: 57  LVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPN 116

Query: 357 NFSLISTLSSCASLGW-IMLGQQIHGEGLKLG-LDSDVSVSNALLSLYADAGYLSRCLKV 414
           +F+  S   + AS      +G QIH   ++ G L  D  VS A L +Y   G L     +
Sbjct: 117 DFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHL 176

Query: 415 FFLMPEHDQVSWNSVI-GAFADSEALVSEAVKYYLDMRRAGWSPNGVT---FINILAAAS 470
           F  MP  + V+WN+V+  A  D   L  E ++ Y  +R AG  PN V+   F N  A A 
Sbjct: 177 FGEMPNRNVVAWNAVMTNAVLDGRPL--ETIEAYFGLREAGGLPNVVSACAFFNACAGAM 234

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWN 530
             S   LG Q H  V+K     + ++ N+++  YGKC        +F  M  R + VSW 
Sbjct: 235 YLS---LGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVR-NSVSWC 290

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           SM++ Y  N    +A        + G+    F  ++ L+ CA +  L  G  +HA  VR+
Sbjct: 291 SMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRS 350

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
           C++ ++ + SALVDMY KCG ++ A + F   P RN+ +WN+MI GYA  G    AL +F
Sbjct: 351 CIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVF 410

Query: 651 SQMKLDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
             M   G   P+++T V V+++CS  GL  +G++ F++M + +G+ P+ E ++C+VDLLG
Sbjct: 411 DDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLG 470

Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
           RAG  ++  E I  MP+ P+  +W  +LGAC      KTELGR AA  LFE++PQ++ N+
Sbjct: 471 RAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHG--KTELGRIAAEKLFELDPQDSGNH 528

Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIY 829
           VLL+NM+AS G+W +    RK MK   +KK+ GCSWVT K+ VHVF A D  H   + I 
Sbjct: 529 VLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQ 588

Query: 830 EKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIM 888
             L +L ++M+ AGY+P T+++L+DLE E KE  V  HSEK+A+AF ++     +PIRIM
Sbjct: 589 ALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIM 648

Query: 889 KNLRVCGDCHSAFKFIS 905
           KNLR+C DCH AFKFIS
Sbjct: 649 KNLRICVDCHRAFKFIS 665



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 207/426 (48%), Gaps = 56/426 (13%)

Query: 155 LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL 214
           ++S+ + IS  +Q G  +     F+ M R G    L+PN++TF S   AA +S    S +
Sbjct: 82  VVSYTAFISGAAQHGRPLPALSAFAGMLRLG----LRPNDFTFPSAFKAA-ASAPPRSTI 136

Query: 215 LQQILAMVKKAGLLS-DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM---- 269
             QI ++  + G L  D +V  A +  + + G    AR +F +M  +NVV+ N +M    
Sbjct: 137 GPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAV 196

Query: 270 -EGR------------------------------------RKGKEVHGYLIRSGLFDMVA 292
            +GR                                      G++ HG++++ G    V+
Sbjct: 197 LDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVS 256

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           V N +V+ Y KC     +R+VF  M  ++SVSW +M++   QNG  EEA   +   RR G
Sbjct: 257 VLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSG 316

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
              ++F + S L++CA L  + LG+ +H   ++  +D+++ V++AL+ +Y   G +    
Sbjct: 317 EEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAE 376

Query: 413 KVFFLMPEHDQVSWNSVIGAFA---DSEALVSEAVKYYLDMRRAG-WSPNGVTFINILAA 468
           ++F+  P+ + V+WN++IG +A   D++     A+  + DM R+G  +PN +T +N++ +
Sbjct: 377 QIFYETPQRNLVTWNAMIGGYAHIGDAQ----NALLVFDDMIRSGETAPNYITLVNVITS 432

Query: 469 ASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
            S   + K G+++   +  ++ +   T     ++   G+ G  +   ++   M  R    
Sbjct: 433 CSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSIS 492

Query: 528 SWNSMI 533
            W +++
Sbjct: 493 VWGALL 498



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 193/462 (41%), Gaps = 55/462 (11%)

Query: 17  AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKE 76
           A   F+C  L+N+Y ++   A+A+      P    VS+   +SG    G    A   F  
Sbjct: 48  ALSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQHGRPLPALSAFAG 107

Query: 77  MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-TFDGLVSNVLIAMYGS 135
           M+R G   N +   S  +A     P     G Q+H L ++      D  VS   + MY  
Sbjct: 108 MLRLGLRPNDFTFPSAFKAAASAPPRS-TIGPQIHSLAIRFGYLPVDPFVSCAALDMYFK 166

Query: 136 CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
                  AR +F E+  R++++WN++++     G  +   + +  ++  G   ++     
Sbjct: 167 T-GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACA 225

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
            F +   A Y S      L +Q    V K G   D+ V +++V  + +      AR +F+
Sbjct: 226 FFNACAGAMYLS------LGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFD 279

Query: 256 QMIQKNVVS---------MNGLME--------GRRKGKE--------------------- 277
            M  +N VS          NG  E         RR G+E                     
Sbjct: 280 GMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHL 339

Query: 278 ---VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
              +H   +RS +   + V + LV+MY KCG ++D+  +F     ++ V+WN MI G   
Sbjct: 340 GRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAH 399

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNF-SLISTLSSCASLGWIMLGQQIHGEGL--KLGLDSD 391
            G  + A++ F  M R G  + N+ +L++ ++SC+  G    G ++  E +  + G++  
Sbjct: 400 IGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELF-ETMRERFGIEPR 458

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
                 ++ L   AG   +  +V   MP    +S W +++GA
Sbjct: 459 TEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGA 500



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 214/487 (43%), Gaps = 57/487 (11%)

Query: 8   HLQILKHGF-AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           H   ++ G+   D F+    +++Y + G L  A  LF EMP+RN V+W  +++     G 
Sbjct: 141 HSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGR 200

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             E  + +  +  AG L N  +  +   AC   G      G Q H  V+K     D  V 
Sbjct: 201 PLETIEAYFGLREAGGLPNVVSACAFFNAC--AGAMYLSLGEQFHGFVVKCGFEMDVSVL 258

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N ++  YG C      AR +F+ +  R+ +SW S+++ Y+Q G     F  +   +R G 
Sbjct: 259 NSMVDFYGKC-RCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSG- 316

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
               +P ++   S +T    + L G +L + + A+  ++ + ++++V SALV  + + G 
Sbjct: 317 ---EEPTDFMVSSALTTC--AGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGC 371

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLF-DMVAVGN------GLVN 299
              A +IF +  Q+N+V+ N ++ G     +    L+   +F DM+  G        LVN
Sbjct: 372 VEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALL---VFDDMIRSGETAPNYITLVN 428

Query: 300 MYAKC---GTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
           +   C   G   D   +F     RF I   +  +  ++  L + G  E+A      M   
Sbjct: 429 VITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMP-- 486

Query: 352 GLMSSNFSLI-STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLS 409
             M  + S+  + L +C   G   LG +I  E L   LD   S ++ LLS ++A AG  +
Sbjct: 487 --MRPSISVWGALLGACKMHGKTELG-RIAAEKL-FELDPQDSGNHVLLSNMFASAGRWA 542

Query: 410 RCLKVFFLM--------PEHDQVSWNSVIGAFA----------DSEALVSEAVKYYLDMR 451
               +   M        P    V+W +V+  F           + +AL+S+  K    M+
Sbjct: 543 EATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRK---QMQ 599

Query: 452 RAGWSPN 458
            AG+ P+
Sbjct: 600 AAGYMPD 606



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 154/339 (45%), Gaps = 25/339 (7%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
           FH  ++K GF  DV + N++++ Y +      A  +FD M  RNSVSW  +V+ Y   G 
Sbjct: 242 FHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGA 301

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             EA   +    R+G     + + S L  C   G  G   G  +H + ++S    +  V+
Sbjct: 302 EEEAFAAYLGARRSGEEPTDFMVSSALTTC--AGLLGLHLGRALHAVAVRSCIDANIFVA 359

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L+ MYG C    D A +IF E   R+L++WN++I  Y+  GD  +   +F  M R G 
Sbjct: 360 SALVDMYGKCGCVED-AEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSG- 417

Query: 187 RYSLKPNEYTFGSLITAAYSSVLS--GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
                PN  T  ++IT+     L+  G  L +    M ++ G+       + +V    R 
Sbjct: 418 --ETAPNYITLVNVITSCSRGGLTKDGYELFE---TMRERFGIEPRTEHYACVVDLLGRA 472

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LV 298
           G    A ++ + M  +  +S+ G + G  +  GK   G +    LF++    +G    L 
Sbjct: 473 GMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLS 532

Query: 299 NMYAKCGTIDDSRSVFRFM----IGKDS----VSWNTMI 329
           NM+A  G   ++  + + M    I KD     V+W  ++
Sbjct: 533 NMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVV 571


>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 691

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 213/588 (36%), Positives = 341/588 (57%), Gaps = 6/588 (1%)

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           +  DG      +  + +S+C  L  I   +++    +  G + D+ V N +L ++   G 
Sbjct: 109 LEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGL 168

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +    K+F  MPE D  SW +++G   D+    SEA + +L M +        TF  ++ 
Sbjct: 169 MLDARKLFDEMPEKDVASWMTMVGGLVDTGNF-SEAFRLFLCMWKEFNDGRSRTFATMIR 227

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
           A++   + ++G Q+H+  +K  V ++  +  AL+  Y KCG ++D   +F +M E+   V
Sbjct: 228 ASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEK-TTV 286

Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
            WNS+I+ Y  +    +A++L + M   G  +DHFT + V+  CA +A+LE   + HA  
Sbjct: 287 GWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAAL 346

Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
           VR     D+V  +ALVD YSK GR++ A   F+ M  +NV SWN++I+GY  HG G +A+
Sbjct: 347 VRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAV 406

Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDL 707
            +F QM  +G  P HVTF+ VLSACS++GL   G++ F SM + + + P+   ++CM++L
Sbjct: 407 EMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIEL 466

Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAV 767
           LGR   LD+    I   P  P + +W  +L A CR + +  ELG+ AA  L+ MEP+   
Sbjct: 467 LGRESLLDEAYALIRTAPFKPTANMWAALLTA-CRMH-KNLELGKLAAEKLYGMEPEKLC 524

Query: 768 NYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDL 827
           NY++L N+Y S GK ++ A   + +K+  ++    CSWV +K   + F+ GD+SH +   
Sbjct: 525 NYIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFLCGDKSHSQTKE 584

Query: 828 IYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIR 886
           IY+K+  L  ++   GY  + +  L D++ E ++ ++ YHSEK+A+AF L       P++
Sbjct: 585 IYQKVDNLMVEICKHGYAEENETLLPDVD-EEEQRILKYHSEKLAIAFGLINTPHWTPLQ 643

Query: 887 IMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           I +  RVCGDCHSA K I+ + GREIV+RD++RFHHF +G CSCGDYW
Sbjct: 644 ITQGHRVCGDCHSAIKLIAMVTGREIVVRDASRFHHFRNGSCSCGDYW 691



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 2/311 (0%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R  K V  Y+I SG    + V N ++ M+ KCG + D+R +F  M  KD  SW TM+ GL
Sbjct: 135 RGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGL 194

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
              G + EA   F  M ++     + +  + + + A LG + +G+QIH   LK G+  D 
Sbjct: 195 VDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDH 254

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            VS AL+ +Y+  G +     VF  MPE   V WNS+I ++A       EA+  Y +MR 
Sbjct: 255 FVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYA-LHGYSEEALSLYFEMRD 313

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           +G + +  T   ++   +  +  +   Q HA ++++  A +     AL+  Y K G M+D
Sbjct: 314 SGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMED 373

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
              +F RM   ++ +SWN++I+GY ++    +A+ +   M+Q G    H TF  VLSAC+
Sbjct: 374 ARHVFNRM-RHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACS 432

Query: 573 SVATLERGMEV 583
                +RG E+
Sbjct: 433 YSGLSQRGWEI 443



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 160/337 (47%), Gaps = 17/337 (5%)

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV-----SEAVKYY--LDMRRAGWSPNG 459
           Y+ R + V     E  Q+   S  G  +  E LV      EA++ +  L++   G+    
Sbjct: 63  YMERNVPVL----EDTQIRKTSPSGLCSQIEKLVVCNRHREAMELFEILELEHDGYGVGA 118

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
            T+  +++A       +   +V   +I      +  + N +L  + KCG M D  K+F  
Sbjct: 119 STYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDE 178

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           M E +D  SW +M+ G +      +A  L   M +        TFAT++ A A +  ++ 
Sbjct: 179 MPE-KDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQV 237

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
           G ++H+C ++  +  D  +  AL+DMYSKCG I+ A   FD MP +    WNS+I+ YA 
Sbjct: 238 GKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYAL 297

Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
           HG+ ++AL+L+ +M+  G   DH T   V+  C+    ++   +   ++ + +G    + 
Sbjct: 298 HGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVR-HGFATDIV 356

Query: 700 QFSCMVDLLGRAGELDKIEEFINKMP----ITPNSLI 732
             + +VD   + G ++      N+M     I+ N+LI
Sbjct: 357 ANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALI 393



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 155/327 (47%), Gaps = 44/327 (13%)

Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
           T+ +L++A     L     ++++   +  +G   DLYV + ++    + G    ARK+F+
Sbjct: 120 TYDALVSACVG--LRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFD 177

Query: 256 QMIQKNVVS----MNGLME--------------------GRRK----------------- 274
           +M +K+V S    + GL++                    GR +                 
Sbjct: 178 EMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQV 237

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK++H   ++ G+ D   V   L++MY+KCG+I+D+  VF  M  K +V WN++I+    
Sbjct: 238 GKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYAL 297

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +G  EEA+  +  MR  G    +F++   +  CA L  +   +Q H   ++ G  +D+  
Sbjct: 298 HGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVA 357

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           + AL+  Y+  G +     VF  M   + +SWN++I  + +      EAV+ +  M + G
Sbjct: 358 NTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGN-HGQGQEAVEMFEQMLQEG 416

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQV 481
            +P  VTF+ +L+A S   + + G ++
Sbjct: 417 VTPTHVTFLAVLSACSYSGLSQRGWEI 443



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 130/263 (49%), Gaps = 13/263 (4%)

Query: 11  ILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEA 70
           ++  GF  D+++ N ++ ++V+ G +  A KLFDEMP+++  SW  +V G    G  +EA
Sbjct: 144 MINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEA 203

Query: 71  CKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLI 130
            ++F  M +           +++RA    G    + G Q+H   LK     D  VS  LI
Sbjct: 204 FRLFLCMWKEFNDGRSRTFATMIRA--SAGLGLVQVGKQIHSCALKRGVGDDHFVSCALI 261

Query: 131 AMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRY 188
            MY  C  +E   C   +F+++  +  + WNSII+ Y+  G +     L+  M+  G   
Sbjct: 262 DMYSKCGSIEDAHC---VFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSG--- 315

Query: 189 SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFY 248
               + +T  S++    + + S  +  Q   A+V+  G  +D+   +ALV  +++ G   
Sbjct: 316 -TTVDHFTI-SIVIRICARLASLEHAKQAHAALVRH-GFATDIVANTALVDFYSKWGRME 372

Query: 249 YARKIFEQMIQKNVVSMNGLMEG 271
            AR +F +M  KNV+S N L+ G
Sbjct: 373 DARHVFNRMRHKNVISWNALIAG 395



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 7/206 (3%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   LK G   D F+   LI++Y + G +  A  +FD+MP++ +V W  I++ Y   
Sbjct: 239 KQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALH 298

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G S EA  ++ EM  +G  ++ + +  V+R C     +  +   Q H  +++     D +
Sbjct: 299 GYSEEALSLYFEMRDSGTTVDHFTISIVIRICARL--ASLEHAKQAHAALVRHGFATDIV 356

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
            +  L+  Y       D AR +F  +  +++ISWN++I+ Y   G      ++F +M +E
Sbjct: 357 ANTALVDFYSKWGRMED-ARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQE 415

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLS 210
           G    + P   TF ++++A   S LS
Sbjct: 416 G----VTPTHVTFLAVLSACSYSGLS 437



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 55/101 (54%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           + AK  H  +++HGFA D+     L++ Y + G +  A  +F+ M  +N +SW  +++GY
Sbjct: 337 EHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGY 396

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPS 102
            + G   EA +MF++M++ G         +VL AC   G S
Sbjct: 397 GNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLS 437


>gi|302788234|ref|XP_002975886.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
 gi|300156162|gb|EFJ22791.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
          Length = 679

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 237/673 (35%), Positives = 385/673 (57%), Gaps = 15/673 (2%)

Query: 268 LMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
           L EGRR    +H  ++ +GL   + +GN L+ MY KCG ++++R+VF  +   +  SW+ 
Sbjct: 16  LPEGRR----IHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEKIESPNIFSWSI 71

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           +I     NG    A+  +  M  +G+      LI+ +S+C+SLG +  G+ +      +G
Sbjct: 72  IIGACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHGRALEARITSMG 131

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVSEAVKY 446
                 V N+LL++Y  AG +    K F  M  +   VSW ++I  FA        A+ +
Sbjct: 132 FHLHPVVWNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFA-LHGCEDLALDF 190

Query: 447 YLDMRRAGWSPNGVTFINILA--AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
           +  M   G  PN VTF++ILA  A S+ ++   G ++H  ++   + + + + N+LL+ Y
Sbjct: 191 FRKMVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLHELILDAGL-DSSIVRNSLLNMY 249

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
           GKCG +D+  ++F R  + R+ ++W++MI+ Y  N    +A++L   M   G   D +TF
Sbjct: 250 GKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDLEGLEPDEYTF 309

Query: 565 ATVLSACASVA-TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
            ++L AC+    TL  G  +H       LE  +V+ +AL++MY + G+++ A R F+ M 
Sbjct: 310 TSLLDACSIAGDTLTEGRALHRRLEAKGLEKKMVLATALINMYGRYGQLEDALRVFEKMN 369

Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
             N+ +W ++I+ +A+HG+   A+ L  +M L+G   D++ F+ VL ACSHA +++ G  
Sbjct: 370 HWNLVAWTALIAAFAQHGN-VHAIDLSWRMHLEGVQADNIVFLSVLHACSHAVVLEAGLS 428

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
            F+ M   +G+      +SCMVDLL R G + + EE ++ MP  P  +  +T+L AC  +
Sbjct: 429 CFQEMVADFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSMPFEPAHMEMKTLLAACRVS 488

Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
               T  G + A +   + P +A  YVL+++ YA+  KW++VA+ ++ M +  VKK  G 
Sbjct: 489 G--DTPRGARVARLASGLIPHDAAPYVLMSHAYAAVEKWDEVAEVQERMAKLGVKKPRGW 546

Query: 804 SWVTMKDGVHVFVAGDES-HPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKED 862
           S V +K+ VH F AG+ S H E   I  +L+ L   +++ GY+P T      LE + KED
Sbjct: 547 SCVEVKNRVHQFFAGNFSWHSEAAEIEVELRRLQAVVKEGGYIPDTGQIGHRLEEDGKED 606

Query: 863 LVSYHSEKIAVAFVLTR-NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFH 921
           L++ HSE++A+AF L R  + LPI ++KNLRVC DCH+  K IS+ VGR IV+RD+ RFH
Sbjct: 607 LLALHSERVAIAFGLLRVPAGLPIHVVKNLRVCSDCHAVAKIISRSVGRRIVVRDAYRFH 666

Query: 922 HFNDGKCSCGDYW 934
            F +G CSCGDYW
Sbjct: 667 RFENGTCSCGDYW 679



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 207/423 (48%), Gaps = 12/423 (2%)

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
           +  S L  C     +  G++IH E +  GL  D+ + N L+ +Y   G +     VF  +
Sbjct: 2   AFASLLQQCGRSRSLPEGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEKI 61

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
              +  SW+ +IGA  D+  L   A++ Y  M   G   + V  IN ++A SS      G
Sbjct: 62  ESPNIFSWSIIIGACVDN-GLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHG 120

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
             + A++          + N+LL+ Y K G +D+  K F  M+  +  VSW +MISG+  
Sbjct: 121 RALEARITSMGFHLHPVVWNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFAL 180

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLS--ACASVATLERGMEVHACGVRACLEFDV 596
           +     A++    M+  G R +  TF ++L+  AC+++  L  G ++H   + A L+  +
Sbjct: 181 HGCEDLALDFFRKMVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLHELILDAGLDSSI 240

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLM-PVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
           V  S L++MY KCG +D A R F+     RN+ +W++MI+ Y+ +G G +AL+L+ +M L
Sbjct: 241 VRNS-LLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDL 299

Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD 715
           +G  PD  TF  +L ACS AG      +      +  GL  ++   + ++++ GR G+L+
Sbjct: 300 EGLEPDEYTFTSLLDACSIAGDTLTEGRALHRRLEAKGLEKKMVLATALINMYGRYGQLE 359

Query: 716 KIEEFINKMPITPNSLIWRTVLGACCR-ANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
                  KM    N + W  ++ A  +  N    +L  +       +E   A N V L+ 
Sbjct: 360 DALRVFEKMN-HWNLVAWTALIAAFAQHGNVHAIDLSWR-----MHLEGVQADNIVFLSV 413

Query: 775 MYA 777
           ++A
Sbjct: 414 LHA 416



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 146/283 (51%), Gaps = 6/283 (2%)

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           V F ++L           G ++HA+++   +  +  + N L+  YGKCG M++   +F +
Sbjct: 1   VAFASLLQQCGRSRSLPEGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEK 60

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
           + E  +  SW+ +I   + N L  +A+ L  +M   G RLD       +SAC+S+ +L+ 
Sbjct: 61  I-ESPNIFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDH 119

Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF-DLMPVRNVYSWNSMISGYA 638
           G  + A           V+ ++L++MY K G ID A +FF D+   ++V SW +MISG+A
Sbjct: 120 GRALEARITSMGFHLHPVVWNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFA 179

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS--ACSHAGLVDEGFKHFKSMSQVYGLIP 696
            HG  D AL  F +M  +G  P+ VTFV +L+  ACS+  L+  G K    +    GL  
Sbjct: 180 LHGCEDLALDFFRKMVAEGVRPNEVTFVSILALEACSNLNLLAAG-KKLHELILDAGLDS 238

Query: 697 QLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
            + + S ++++ G+ G LD+      +     N + W T++ A
Sbjct: 239 SIVRNS-LLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAA 280



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/464 (22%), Positives = 202/464 (43%), Gaps = 58/464 (12%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + +  H +I+  G   D+FL N LI +Y + G +  A  +F+++   N  SW+ I+    
Sbjct: 18  EGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEKIESPNIFSWSIIIGACV 77

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G++  A +++  M   G  L+   L + + AC   G      G  +   +        
Sbjct: 78  DNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGS--LDHGRALEARITSMGFHLH 135

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIE-TRDLISWNSIISVYSQRGDTISVFKLFSRM 181
            +V N L+ MY     S D AR+ F+++   + ++SW ++IS ++  G        F +M
Sbjct: 136 PVVWNSLLNMYCKA-GSIDNARKFFQDMAGDQSVVSWTAMISGFALHGCEDLALDFFRKM 194

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
             EG R    PNE TF S++     S L+     +++  ++  AGL S + V ++L++ +
Sbjct: 195 VAEGVR----PNEVTFVSILALEACSNLNLLAAGKKLHELILDAGLDSSI-VRNSLLNMY 249

Query: 242 ARLGNFYYARKIFEQMIQ-KNVV---------SMNGLMEGRR------------------ 273
            + G    AR++FE+    +N++         S+NG  +GR+                  
Sbjct: 250 GKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNG--DGRQALSLYKKMDLEGLEPDEY 307

Query: 274 -----------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                            +G+ +H  L   GL   + +   L+NMY + G ++D+  VF  
Sbjct: 308 TFTSLLDACSIAGDTLTEGRALHRRLEAKGLEKKMVLATALINMYGRYGQLEDALRVFEK 367

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           M   + V+W  +I+   Q+G      +++  M  +G+ + N   +S L +C+    +  G
Sbjct: 368 MNHWNLVAWTALIAAFAQHGNVHAIDLSW-RMHLEGVQADNIVFLSVLHACSHAVVLEAG 426

Query: 377 QQIHGEGL-KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
                E +   G+    +  + ++ L A  G ++   ++   MP
Sbjct: 427 LSCFQEMVADFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSMP 470



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 16/234 (6%)

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
            FA++L  C    +L  G  +HA  V   L  D+ +G+ L+ MY KCG ++ A   F+ +
Sbjct: 2   AFASLLQQCGRSRSLPEGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEKI 61

Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
              N++SW+ +I     +G   +AL L+  M  +G   D V  +  +SACS  G +D G 
Sbjct: 62  ESPNIFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHGR 121

Query: 683 K-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACC 741
               +  S  + L P +  ++ ++++  +AG +D   +F   M    + + W  ++    
Sbjct: 122 ALEARITSMGFHLHPVV--WNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFA 179

Query: 742 RANCRKTELG--RKAANMLFEMEPQNAVNYV-LLA-------NMYASGGKWEDV 785
              C    L   RK   M+ E    N V +V +LA       N+ A+G K  ++
Sbjct: 180 LHGCEDLALDFFRK---MVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLHEL 230


>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 230/593 (38%), Positives = 339/593 (57%), Gaps = 40/593 (6%)

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYA--DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
           +QIHG+ LK GL  D   ++ LL+  A  ++G L+    VF  +   +   WN++I  ++
Sbjct: 35  RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYS 94

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANET 494
           +S+    EA+  Y  M       N  TF  +L A SS S  +   Q+HA +IK    +E 
Sbjct: 95  NSKE-PEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEI 153

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY-----------IHNELL- 542
              N+LL+ Y K G++     +F ++ ++RD VSWNSMI GY           I N +  
Sbjct: 154 YTTNSLLNVYSKSGDIKSARLLFDQV-DQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPE 212

Query: 543 ------------------PK-AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
                             PK A+NL   M   G +LD+    + L ACA +  L++G  +
Sbjct: 213 RNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWI 272

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           HA   +  +E D ++G  L+DMY+KCG ++ A   F  M  + V  W +MISGYA HG G
Sbjct: 273 HAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRG 332

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC 703
            +AL  F +M+  G  P+ +TF G+L+ACSHAGLV E    F+SM +++G  P +E + C
Sbjct: 333 REALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGC 392

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEME 762
           MVDLLGRAG L + EE I  MP+ PN+ IW  +L AC    N    ELG++   +L +++
Sbjct: 393 MVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGN---LELGKQIGKILIQVD 449

Query: 763 PQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESH 822
           P +   Y+ LA+++A+ G+W   A+ R+ MKE  V K  GCS +++    H F+AGDESH
Sbjct: 450 PGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESH 509

Query: 823 PEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNS 881
           P+   I   L+++ +++R+ GY P+    L DLE + KE  + +HSEK+AV F +++   
Sbjct: 510 PQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKP 569

Query: 882 KLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            + IRI+KNLRVC DCH+  K ISK+  REI++RD  RFH F DG C+CGDYW
Sbjct: 570 GMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 221/472 (46%), Gaps = 52/472 (11%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLE-STDCARRIFEEIETRDLISWNSIISVYSQ 167
           Q+H  +LK+    D + ++ L+A   S    S   AR +F+ I   +   WN++I  YS 
Sbjct: 36  QIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSN 95

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
             +      L+  M      +S+  N YTF  L+ A  S  +S S   QQI A + K G 
Sbjct: 96  SKEPEEALLLYHHM----LYHSVPHNAYTFPFLLKACSS--MSASEETQQIHAHIIKMGF 149

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGL 287
            S++Y  ++L++ +++ G+   AR +F+Q+ Q++ VS N +++G                
Sbjct: 150 GSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDG---------------- 193

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
                        Y KCG I+ +  +F  M  ++ +SW +MISG    G  +EA+  F  
Sbjct: 194 -------------YTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHR 240

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M+  G+   N +L+STL +CA LG +  G+ IH    K  ++ D  +   L+ +YA  G 
Sbjct: 241 MQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGD 300

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           L   ++VF  M E     W ++I  +A       EA+++++ M+ AG  PN +TF  IL 
Sbjct: 301 LEEAIEVFRKMEEKGVSVWTAMISGYA-IHGRGREALEWFMKMQTAGVEPNQMTFTGILT 359

Query: 468 AASSFSMGKLGHQVHAQVIKYNVAN-----ETTIEN--ALLSCYGKCGEMDDCEKIFARM 520
           A S   +      VH   + +         + +IE+   ++   G+ G + + E++   M
Sbjct: 360 ACSHAGL------VHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENM 413

Query: 521 SERRDEVSWNSMISG-YIHNEL-LPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
             + +   W ++++  +IH  L L K +  +   +  G    +   A++ +A
Sbjct: 414 PVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAA 465



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 162/364 (44%), Gaps = 65/364 (17%)

Query: 1   SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDE--------------- 45
           S++ +  H  I+K GF  +++  N+L+NVY + GD+ SA  LFD+               
Sbjct: 134 SEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDG 193

Query: 46  ----------------MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYAL 89
                           MP+RN +SW  ++SG    G   EA  +F  M  AG  L+  AL
Sbjct: 194 YTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVAL 253

Query: 90  GSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEE 149
            S L+AC + G      G  +H  + K     D ++  VLI MY  C +  + A  +F +
Sbjct: 254 VSTLQACADLGV--LDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEE-AIEVFRK 310

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSV 208
           +E + +  W ++IS Y+  G      + F +MQ  G    ++PN+ TF  ++TA +++ +
Sbjct: 311 MEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAG----VEPNQMTFTGILTACSHAGL 366

Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK-------- 260
           +  + LL +  +M +  G    +     +V    R G    A ++ E M  K        
Sbjct: 367 VHEAKLLFE--SMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGA 424

Query: 261 --NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG-----LVNMYAKCGTIDDSRSV 313
             N   ++G +E    GK++   LI+      V  G+G     L +++A  G  + +  V
Sbjct: 425 LLNACHIHGNLE---LGKQIGKILIQ------VDPGHGGRYIHLASIHAAAGEWNQAARV 475

Query: 314 FRFM 317
            R M
Sbjct: 476 RRQM 479



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 79/349 (22%), Positives = 151/349 (43%), Gaps = 36/349 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLIN--VYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           ++ +  H Q+LK G   D    + L+        G LA A  +FD +   N+  W  ++ 
Sbjct: 32  EELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIR 91

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           GY++     EA  ++  M+      N Y    +L+AC     S  +   Q+H  ++K   
Sbjct: 92  GYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSAS--EETQQIHAHIIKMGF 149

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             +   +N L+ +Y    +    AR +F++++ RD +SWNS+I  Y++ G+    +++F+
Sbjct: 150 GSEIYTTNSLLNVYSKSGD-IKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFN 208

Query: 180 RMQRE----------GFRYSLKPNEY--TFGSLITA-------AYSSVLSGSYLL----- 215
            M             G   + KP E    F  + TA       A  S L     L     
Sbjct: 209 HMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQ 268

Query: 216 -QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--- 271
            + I A +KK  +  D  +G  L+  +A+ G+   A ++F +M +K V     ++ G   
Sbjct: 269 GKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAI 328

Query: 272 RRKGKEVHGYLIR---SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
             +G+E   + ++   +G+        G++   +  G + +++ +F  M
Sbjct: 329 HGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESM 377


>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 223/575 (38%), Positives = 324/575 (56%), Gaps = 6/575 (1%)

Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
           S L SC + G +  G+Q+HG  L  GL  D  +S  L+ LYA  G +    ++F  MP+ 
Sbjct: 67  SILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKR 126

Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
           +   WN +I A+A  E     AV+ Y  M   G  P+  T+  +L A ++    + G +V
Sbjct: 127 NVFLWNVLIRAYA-REGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREV 185

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
           H +V       +  +   ++  Y KCG +DD   +F  ++ R D V WNSMI+ Y  N  
Sbjct: 186 HQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVR-DAVVWNSMIAAYGQNGR 244

Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
             +A+ L   M   G      T  + +SA A  A L RG E+H  G R        + ++
Sbjct: 245 PMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTS 304

Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-P 660
           LVDMY+K G +  A   F+ +  R + SWN+MI GY  HGH D+AL LF++MK D  + P
Sbjct: 305 LVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTP 364

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           D++TFVGVLSAC+H G+V+E  + F  M   Y + P ++ ++C++D+LG  G  ++  + 
Sbjct: 365 DNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDL 424

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           I  M I P+S IW  +L  C     +  ELG  A   L E+EP++A NYV L+N+YA  G
Sbjct: 425 IKGMSIEPDSGIWGALLNGC--KIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSG 482

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
           KWE  A+ RK M    +KK   CSW+ +K   H F+ GD SHP  D IY +L+ L   M 
Sbjct: 483 KWEKAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMS 542

Query: 841 DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHS 899
           DAGYVP       +++ + K ++V  HSE++A+AF +++      + + KNLRVC DCH 
Sbjct: 543 DAGYVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHV 602

Query: 900 AFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
             K IS+IV REI++RD NR+HHF +G+CSC DYW
Sbjct: 603 VIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 171/371 (46%), Gaps = 5/371 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R G+++HG L+ SGL     +   LV++YA CG +  +R +F  M  ++   WN +I   
Sbjct: 79  RAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAY 138

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            + G  E A+  +  M   G+   NF+    L +CA+L  +  G+++H          DV
Sbjct: 139 AREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDV 198

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V   ++ +YA  G +     VF  +   D V WNS+I A+  +   + EA+    DM  
Sbjct: 199 FVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPM-EALALCRDMAA 257

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
            G  P   T ++ ++AA+  +    G ++H    +     +  ++ +L+  Y K G +  
Sbjct: 258 NGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQV 317

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSAC 571
              +F ++  +R+ VSWN+MI GY  +    +A+ L   M    Q   D+ TF  VLSAC
Sbjct: 318 ARVLFEQLM-KRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSAC 376

Query: 572 ASVATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYS 629
                +E   E     V A  ++  V   + ++D+    GR + A      M +  +   
Sbjct: 377 NHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGI 436

Query: 630 WNSMISGYARH 640
           W ++++G   H
Sbjct: 437 WGALLNGCKIH 447



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 184/397 (46%), Gaps = 55/397 (13%)

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLL-QQILAMVKKAGLLSDLYVGSALVSGFARLG 245
           R +  P+ Y   + I    S V SGS    +Q+   +  +GL  D  + + LV  +A  G
Sbjct: 54  RLASSPHAYHHHTSILQ--SCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACG 111

Query: 246 NFYYARKIFEQMIQKNVVSMNGLM-----EGRRK-------------------------- 274
              +AR++F+ M ++NV   N L+     EG R+                          
Sbjct: 112 QVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLK 171

Query: 275 ----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                     G+EVH  +  +     V V  G+V+MYAKCG +DD+R+VF  +  +D+V 
Sbjct: 172 ACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVV 231

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           WN+MI+   QNG   EA+     M  +G+  +  +L+S +S+ A    +  G+++HG G 
Sbjct: 232 WNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGW 291

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           + G      +  +L+ +YA +G++     +F  + + + VSWN++I  +        EA+
Sbjct: 292 RRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYG-MHGHADEAL 350

Query: 445 KYYLDMR-RAGWSPNGVTFINILAAASSFSMGKLGHQ-----VHAQVIKYNVANETTIEN 498
             +  M+  A  +P+ +TF+ +L+A +   M +   +     V+A  IK  V + T + +
Sbjct: 351 ALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVID 410

Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
            L    G  G  ++   +   MS   D   W ++++G
Sbjct: 411 VL----GHTGRFEEAYDLIKGMSIEPDSGIWGALLNG 443



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 155/356 (43%), Gaps = 29/356 (8%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H ++L  G   D  L   L+++Y   G +  A +LFD MP RN   W  ++  Y
Sbjct: 79  RAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAY 138

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
             +G    A ++++ MV  G   + +    VL+AC        + G +VH  V  +    
Sbjct: 139 AREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAAL--LDLETGREVHQRVSGTRWGQ 196

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V   ++ MY  C    D AR +F+ I  RD + WNS+I+ Y Q G  +    L   M
Sbjct: 197 DVFVCAGVVDMYAKC-GCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDM 255

Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
              G    + P   T  S ++AA  +               +  GL   L   ++LV  +
Sbjct: 256 AANG----IGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLK--TSLVDMY 309

Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS-GLFD------MVAVG 294
           A+ G    AR +FEQ++++ +VS N ++     G  +HG+   +  LF+       V   
Sbjct: 310 AKSGWVQVARVLFEQLMKRELVSWNAMI----CGYGMHGHADEALALFNKMKGDAQVTPD 365

Query: 295 N-GLVNMYAKC---GTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEA 341
           N   V + + C   G +++++  F  M+   S+      +  +I  L   G +EEA
Sbjct: 366 NITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEA 421


>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Vitis vinifera]
          Length = 632

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 230/617 (37%), Positives = 339/617 (54%), Gaps = 50/617 (8%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLD--SDVSVSNALLSLYADAGYLSRCLKVFFLMPE- 420
           L SCA    + +G+++H   +  G+    +  + NALL  YA  G   +  KVF  +P  
Sbjct: 20  LRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCGCAWQARKVFDEIPHS 79

Query: 421 -HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
             D V W +++G F     +  EA+  +++MRR G  P+ VT + +    +      +G 
Sbjct: 80  HKDTVDWTTLMGCFV-RHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVVVGA 138

Query: 480 QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS------------------ 521
           Q H  ++K  +       NA++  Y K G M +  ++F  M                   
Sbjct: 139 QGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVIRSE 198

Query: 522 ------------ERRDEVSWNSMISGYIHNELLPKAMNLVWFMM-QRGQRLDHFTFATVL 568
                         R+EV+W  MI+GY+ + L  ++  LV  M+      L++ T  ++L
Sbjct: 199 GVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLCSIL 258

Query: 569 SACASVATLERGMEVHACGVRAC-LEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           +AC+    L  G  VHA  ++    E ++++G+A+VDMY+KCGRI  A +FF  MP RNV
Sbjct: 259 TACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNV 318

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
            SWN+M+SG A HG G  AL +F QM  +   PD VTF  VLSACSH+GLVD+G  +F +
Sbjct: 319 VSWNAMLSGLAMHGLGRAALDIFPQMFKEAK-PDDVTFTSVLSACSHSGLVDQGCFYFGN 377

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
           +  VYG+ P++E ++CMVDLLGRAG L++ E  + +MPI PN ++  ++LG+C      K
Sbjct: 378 LESVYGITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPNEVVLGSLLGSCSIHG--K 435

Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
            +LG      L +++PQN   ++LL+NMYA  GK       R+ +K+  +KK  G S + 
Sbjct: 436 LQLGEHLLQELVQLDPQNTEYHILLSNMYALAGKQNRANSLRQVLKKRGIKKVPGMSSIH 495

Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALF--------DL-EPE 858
           +   VH F AGD+SHP    +Y  L E+  ++R AGY P T    F        DL E E
Sbjct: 496 VGGQVHQFSAGDKSHPRTREVYNMLDEMIPRLRLAGYAPNTALQTFAGCDSLEDDLVEQE 555

Query: 859 SKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDS 917
            KE  +  HSEK+A+ F +++    +P+ I KNLR+C DCHSA K +SKI  REIV+RD 
Sbjct: 556 EKEQALFSHSEKLAICFGLISTGPGVPLHIFKNLRICQDCHSAIKIVSKIYNREIVIRDR 615

Query: 918 NRFHHFNDGKCSCGDYW 934
           NRFH F +G CSC DYW
Sbjct: 616 NRFHCFKEGSCSCCDYW 632



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 187/452 (41%), Gaps = 62/452 (13%)

Query: 7   FHLQILKHGFA--YDVFLCNTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVSGYT 62
            H  I+  G A   + FL N L+  Y   G    A K+FDE+P   +++V W  ++  + 
Sbjct: 35  LHATIITTGIAGAPETFLHNALLQFYASCGCAWQARKVFDEIPHSHKDTVDWTTLMGCFV 94

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLK------ 116
              +S+EA  +F EM R G   +   L  +   C   G      G Q H  ++K      
Sbjct: 95  RHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGD--VVVGAQGHGCMVKMGLGGV 152

Query: 117 ---SNQTFD--------GLVSNVLIAMYGSCL-------------ESTDCARRIFEEIET 152
               N   D        G    V   M G  +             E     R +F+E+  
Sbjct: 153 EKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEMPE 212

Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS--VLS 210
           R+ ++W  +I+ Y   G T   F L   M    F   ++ N  T  S++TA   S  ++ 
Sbjct: 213 RNEVAWTIMIAGYLDSGLTQESFALVREMI---FDLEMELNYVTLCSILTACSQSGDLMM 269

Query: 211 GSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
           G ++    L   +K     ++ VG+A+V  +A+ G  + A K F++M Q+NVVS N ++ 
Sbjct: 270 GRWVHAYALKTKEKE---LNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLS 326

Query: 271 GR------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR-----FMIG 319
           G       R   ++   + +    D V     +++  +  G +D     F      + I 
Sbjct: 327 GLAMHGLGRAALDIFPQMFKEAKPDDVTF-TSVLSACSHSGLVDQGCFYFGNLESVYGIT 385

Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
                +  M+  L + G  EEA +    +R   +  +   L S L SC+  G + LG+ +
Sbjct: 386 PKVEHYACMVDLLGRAGRLEEAEI---LVREMPIRPNEVVLGSLLGSCSIHGKLQLGEHL 442

Query: 380 HGEGLKLGLDSDVSVSNALLS-LYADAGYLSR 410
             E ++  LD   +  + LLS +YA AG  +R
Sbjct: 443 LQELVQ--LDPQNTEYHILLSNMYALAGKQNR 472



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 116/244 (47%), Gaps = 16/244 (6%)

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLE--FDVVIGSALVDMYSKCGRIDYASRF 618
           H+ F  +L +CA  ++L+ G  +HA  +   +    +  + +AL+  Y+ CG    A + 
Sbjct: 15  HYRF--LLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCGCAWQARKV 72

Query: 619 FDLMPV--RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
           FD +P   ++   W +++  + RH   D+AL +F +M+  G  PD VT V +   C+  G
Sbjct: 73  FDEIPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLG 132

Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
            V  G +    M ++ GL    +  + ++D+  ++G + +      +M    + + W  +
Sbjct: 133 DVVVGAQGHGCMVKM-GLGGVEKACNAVMDMYAKSGLMGEARRVFYEMK-GQSVVSWTVI 190

Query: 737 LGACCRANCRKTELGRKAANMLF-EMEPQNAVNY-VLLANMYASGGKWEDVAKARKAMKE 794
           L    R+       G +   ++F EM  +N V + +++A    SG   E  A  R+ + +
Sbjct: 191 LDGVIRSE------GVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFD 244

Query: 795 AEVK 798
            E++
Sbjct: 245 LEME 248


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 233/646 (36%), Positives = 358/646 (55%), Gaps = 48/646 (7%)

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGL------- 268
           ++I  +V K G  SD++VG+ L+  +   G     +++F++M++++VVS N +       
Sbjct: 27  REIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERDVVSWNSVIGVFSVH 86

Query: 269 -----------------------------------MEGRRKGKEVHGYLIRSGLFDMVAV 293
                                              +E    G+++H Y++++GL   V V
Sbjct: 87  GFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTV 146

Query: 294 GNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGL 353
           GN LV++Y KCG + DSR VF  +  ++ VSWN +I+ L      ++A+  F  M   G+
Sbjct: 147 GNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGV 206

Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLK 413
             ++ +  S L     L     G++IHG  L+ GL+SD+ V+NAL+ +YA +G   +   
Sbjct: 207 KPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASN 266

Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
           VF  + E + VSWN+++  FA +  L   AV     M+  G  PN VTF N+L A +   
Sbjct: 267 VFNQIGEKNIVSWNAMVANFAQNR-LELAAVDLVRQMQADGEIPNSVTFTNVLPACARIG 325

Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
             + G ++HA+ I+   + +  + NAL   Y KCG ++   ++F      RDEVS+N +I
Sbjct: 326 FLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFK--ISLRDEVSYNILI 383

Query: 534 SGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLE 593
            GY       +++ L   M  +G +LD  ++  V+SACA++A L++G EVH   VR  L 
Sbjct: 384 IGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLH 443

Query: 594 FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM 653
             + I +AL+D Y KCGRID A + F  +P R+  SWNSMI GY   G    A+ LF  M
Sbjct: 444 THLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAM 503

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGE 713
           K DG   D V+++ VLSACSH GLV+EG K+F+ M QV  + P    ++CMVDLLGRAG 
Sbjct: 504 KEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHM-QVQNIKPTQMHYACMVDLLGRAGL 562

Query: 714 LDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLA 773
           +++  + I  +PI P++ +W  +LGA CR +    EL   AA  LF+++PQ++  Y +L+
Sbjct: 563 IEEAVKLIESLPIEPDANVWGALLGA-CRIH-GYIELAHWAAEHLFKLKPQHSGYYSVLS 620

Query: 774 NMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
           NMYA  GKW++  + RK MK    KK  GCSWV + + VH FVAG+
Sbjct: 621 NMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVHAFVAGE 666



 Score =  252 bits (643), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 150/466 (32%), Positives = 254/466 (54%), Gaps = 6/466 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           +KG+E+HG + + G    V VGN L+  Y  CG + D + VF  M+ +D VSWN++I   
Sbjct: 24  QKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERDVVSWNSVIGVF 83

Query: 333 DQNGCYEEAIMNFCAMR-RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
             +G Y EAI  FC M  R G   +  S++S L  CA L   + G+QIH   +K GLDS 
Sbjct: 84  SVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQ 143

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           V+V NAL+ +Y   GY+    +VF  + E + VSWN++I + A  E    +A++ +  M 
Sbjct: 144 VTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLER-NQDALEMFRLMI 202

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
             G  PN VTF ++L       +   G ++H   +++ + ++  + NAL+  Y K G   
Sbjct: 203 DGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSL 262

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
               +F ++ E ++ VSWN+M++ +  N L   A++LV  M   G+  +  TF  VL AC
Sbjct: 263 QASNVFNQIGE-KNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPAC 321

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           A +  L  G E+HA  +R     D+ + +AL DMY+KCG ++ A R F +  +R+  S+N
Sbjct: 322 ARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFKI-SLRDEVSYN 380

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
            +I GY++  +  ++L LF +M + G   D V+++GV+SAC++   + +G K    ++  
Sbjct: 381 ILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQG-KEVHGLAVR 439

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
             L   L   + ++D   + G +D   +   ++P + ++  W +++
Sbjct: 440 KHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIP-SRDTASWNSMI 484



 Score =  242 bits (617), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 188/652 (28%), Positives = 315/652 (48%), Gaps = 58/652 (8%)

Query: 81  GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST 140
           G  L+ +    VL+AC +      + G ++H +V K     D  V N L+  YG+C    
Sbjct: 2   GVRLDDHTFPFVLKACAD--SLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLK 59

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ-REGFRYSLKPNEYTFGS 199
           D  +R+F+E+  RD++SWNS+I V+S  G       LF  M  R GFR    PN  +  S
Sbjct: 60  D-VKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFR----PNMVSIVS 114

Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
           ++       L      +QI   V K GL S + VG+ALV  + + G    +R++F+++ +
Sbjct: 115 VLPVCAG--LEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISE 172

Query: 260 KNVVSMNG--------------------LMEGRRK---------------------GKEV 278
           +N VS N                     +++G  K                     GKE+
Sbjct: 173 RNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEI 232

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
           HG+ +R GL   + V N L++MYAK G    + +VF  +  K+ VSWN M++   QN   
Sbjct: 233 HGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLE 292

Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
             A+     M+ DG + ++ +  + L +CA +G++  G++IH   ++ G   D+ VSNAL
Sbjct: 293 LAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNAL 352

Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
             +YA  G L+   +V F +   D+VS+N +I  ++ +    SE+++ +L+M   G   +
Sbjct: 353 TDMYAKCGCLNLARRV-FKISLRDEVSYNILIIGYSQTTN-CSESLRLFLEMGIKGMKLD 410

Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
            V+++ +++A ++ +  K G +VH   ++ ++     I NALL  Y KCG +D   K+F 
Sbjct: 411 VVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVF- 469

Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
           R    RD  SWNSMI GY     L  A+NL   M + G   D  ++  VLSAC+    +E
Sbjct: 470 RQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVE 529

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGY 637
            G +         ++   +  + +VD+  + G I+ A +  + +P+  +   W +++   
Sbjct: 530 EGKKYFEHMQVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGAC 589

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC-SHAGLVDEGFKHFKSM 688
             HG+ +  L  ++   L    P H  +  VLS   + AG  DE  +  K M
Sbjct: 590 RIHGYIE--LAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLM 639



 Score =  226 bits (575), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 167/586 (28%), Positives = 277/586 (47%), Gaps = 64/586 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H  + K GF  DVF+ NTL+  Y   G L    ++FDEM +R+ VSW  ++  +
Sbjct: 24  QKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERDVVSWNSVIGVF 83

Query: 62  THKGMSNEACKMFKEM-VRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           +  G   EA  +F EM +R+GF  N  ++ SVL  C   G      G Q+HC V+K+   
Sbjct: 84  SVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVC--AGLEDGVTGRQIHCYVVKTGLD 141

Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIIS--VYSQRG-DTISVFKL 177
               V N L+ +YG C    D +RR+F+EI  R+ +SWN+II+   Y +R  D + +F+L
Sbjct: 142 SQVTVGNALVDVYGKCGYVKD-SRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRL 200

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
                       +KPN  TF S++       L      ++I     + GL SD++V +AL
Sbjct: 201 M-------IDGGVKPNSVTFSSMLPVLVELKLFD--FGKEIHGFSLRFGLESDIFVANAL 251

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLM---------------------EGR---- 272
           +  +A+ G    A  +F Q+ +KN+VS N ++                     +G     
Sbjct: 252 IDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNS 311

Query: 273 ----------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                           R GKE+H   IR+G    + V N L +MYAKCG ++ +R VF+ 
Sbjct: 312 VTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFKI 371

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
            + +D VS+N +I G  Q     E++  F  M   G+     S +  +S+CA+L  +  G
Sbjct: 372 SL-RDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQG 430

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +++HG  ++  L + + ++NALL  Y   G +    KVF  +P  D  SWNS+I  +   
Sbjct: 431 KEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGML 490

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
             L + A+  +  M+  G   + V++I +L+A S   + + G +    +   N+      
Sbjct: 491 GEL-TIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMH 549

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM-----ISGYI 537
              ++   G+ G +++  K+   +    D   W ++     I GYI
Sbjct: 550 YACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYI 595



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 156/321 (48%), Gaps = 12/321 (3%)

Query: 461 TFINILAA-ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFAR 519
           TF  +L A A S S+ K G ++H  V K    ++  + N LL  YG CG + D +++F  
Sbjct: 9   TFPFVLKACADSLSVQK-GREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDE 67

Query: 520 MSERRDEVSWNSMISGYIHNELLPKAMNLVWFM-MQRGQRLDHFTFATVLSACASVATLE 578
           M ER D VSWNS+I  +  +    +A++L   M ++ G R +  +  +VL  CA +    
Sbjct: 68  MLER-DVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGV 126

Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
            G ++H   V+  L+  V +G+ALVD+Y KCG +  + R FD +  RN  SWN++I+  A
Sbjct: 127 TGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLA 186

Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
                  AL +F  M   G  P+ VTF  +L       L D G K     S  +GL   +
Sbjct: 187 YLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFG-KEIHGFSLRFGLESDI 245

Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
              + ++D+  ++G   +     N++    N + W  ++     AN  +  L   A +++
Sbjct: 246 FVANALIDMYAKSGRSLQASNVFNQIG-EKNIVSWNAMV-----ANFAQNRLELAAVDLV 299

Query: 759 FEMEPQNAV-NYVLLANMYAS 778
            +M+    + N V   N+  +
Sbjct: 300 RQMQADGEIPNSVTFTNVLPA 320



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 108/474 (22%), Positives = 200/474 (42%), Gaps = 53/474 (11%)

Query: 12  LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
           L+ G   D+F+ N LI++Y + G    AS +F+++ ++N VSW  +V+ +    +   A 
Sbjct: 237 LRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAV 296

Query: 72  KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
            + ++M   G + N     +VL AC   G    + G ++H   +++  + D  VSN L  
Sbjct: 297 DLVRQMQADGEIPNSVTFTNVLPACARIGF--LRPGKEIHARAIRTGSSVDLFVSNALTD 354

Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
           MY  C    + ARR+F +I  RD +S+N +I  YSQ  +     +LF  M  +G    +K
Sbjct: 355 MYAKC-GCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKG----MK 408

Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
            +  ++  +I+A  +  L+     +++  +  +  L + L++ +AL+  + + G    A 
Sbjct: 409 LDVVSYMGVISACAN--LAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAG 466

Query: 252 KIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSR 311
           K+F Q+  ++  S N ++ G                             Y   G +  + 
Sbjct: 467 KVFRQIPSRDTASWNSMILG-----------------------------YGMLGELTIAI 497

Query: 312 SVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
           ++F  M    +  DSVS+  ++S     G  EE    F  M+   +  +       +   
Sbjct: 498 NLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMHYACMVDLL 557

Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS----RCLKVFFLMPEHDQ 423
              G I    ++      L ++ D +V  ALL      GY+         +F L P+H  
Sbjct: 558 GRAGLIEEAVKLIE---SLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHS- 613

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN-GVTFINILAAASSFSMGK 476
             + SV+           EA +    M+  G   N G +++ I     +F  G+
Sbjct: 614 -GYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVHAFVAGE 666



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 92/184 (50%), Gaps = 5/184 (2%)

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
           G RLD  TF  VL ACA   ++++G E+H    +   + DV +G+ L+  Y  CG +   
Sbjct: 2   GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL-DGPLPDHVTFVGVLSACSH 674
            R FD M  R+V SWNS+I  ++ HG   +A+ LF +M L  G  P+ V+ V VL  C  
Sbjct: 62  KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVC-- 119

Query: 675 AGLVDE-GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
           AGL D    +         GL  Q+   + +VD+ G+ G +       +++    N + W
Sbjct: 120 AGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEIS-ERNGVSW 178

Query: 734 RTVL 737
             ++
Sbjct: 179 NAII 182


>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 558

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 231/562 (41%), Positives = 331/562 (58%), Gaps = 14/562 (2%)

Query: 378 QIHGEGLKLGL-DSDVSVSNALLSLYADA-GYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           ++H   LK G  +  +++   LLS  A A   LS    +F L+   D  ++N++I A AD
Sbjct: 6   KLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTIIRAHAD 65

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           S    S ++   + M  AG SP+  TF  +L A +    G     +H+ + K    ++  
Sbjct: 66  SSPSFSLSLFSKMAM--AGVSPDHFTFPFVLKACARLQTGL---DLHSLLFKLGFDSDVY 120

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           ++N L+  YG CG +D   K+F  M ER D VSW+SMI+ +  N    +A+ L   M   
Sbjct: 121 VQNGLIHFYGCCGFLDFALKVFEEMPER-DLVSWSSMIACFAKNGFGYEALALFQRMQLV 179

Query: 556 GQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
           G  + D     +V+SA + +  LE G  +     R  LEF V +G+ALVDM+S+CG I+ 
Sbjct: 180 GTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEE 239

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
           + R FD M  RNV +W ++I+G A HG   +AL +F +M+  G  PDHVTF GVL ACSH
Sbjct: 240 SMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSH 299

Query: 675 AGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWR 734
            GLV EG+  F+S+   YG+ P  E + CMVDLLGRAG L++  +F++ MPI PNS+IWR
Sbjct: 300 GGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWR 359

Query: 735 TVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKE 794
           T+LGAC   N    EL  K    + E++  +  +YVLL+N+Y   G+W + A  R +M+E
Sbjct: 360 TLLGACVNHN--YIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMRE 417

Query: 795 AEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFD 854
             + K+ GCS + +   +H FVAGD +HP+ + I E L  +   ++  GY P     LFD
Sbjct: 418 KRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGYTPDISNVLFD 477

Query: 855 LEPESKEDLVSYHSEKIAVAFVLT--RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREI 912
           +E E KE  + YHSEK+AVAF L   ++S+  IR+MKNLR+C DCH   K+ S +  REI
Sbjct: 478 IEEEEKESTLGYHSEKLAVAFALLCFKDSR-TIRVMKNLRICHDCHCFMKYASDVFEREI 536

Query: 913 VLRDSNRFHHFNDGKCSCGDYW 934
           ++RD NRFHHF+ G CSC DYW
Sbjct: 537 IIRDRNRFHHFSKGSCSCRDYW 558



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 166/344 (48%), Gaps = 17/344 (4%)

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +RS+F  +   D+ ++NT+I     +     ++  F  M   G+   +F+    L +CA 
Sbjct: 41  ARSIFDLIAFPDTFAFNTIIRA-HADSSPSFSLSLFSKMAMAGVSPDHFTFPFVLKACAR 99

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           L     G  +H    KLG DSDV V N L+  Y   G+L   LKVF  MPE D VSW+S+
Sbjct: 100 L---QTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSM 156

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGW-SPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
           I  FA +     EA+  +  M+  G   P+ V  +++++A S     +LG  +   + + 
Sbjct: 157 IACFAKN-GFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRN 215

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNL 548
            +    ++  AL+  + +CG +++  ++F  M E R+ ++W ++I+G   +    +A+ +
Sbjct: 216 GLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGE-RNVLTWTALINGLAVHGRSAEALRM 274

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEV-----HACGVRACLEFDVVIGSALV 603
            + M   G + DH TF  VL AC+    +  G  V     +  G+    E        +V
Sbjct: 275 FYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEH----YGCMV 330

Query: 604 DMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKA 646
           D+  + G ++ A +F D MP+R N   W +++     H + + A
Sbjct: 331 DLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELA 374



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 141/276 (51%), Gaps = 5/276 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           + G ++H  L + G    V V NGL++ Y  CG +D +  VF  M  +D VSW++MI+  
Sbjct: 101 QTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSMIACF 160

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLI-STLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
            +NG   EA+  F  M+  G +  +  ++ S +S+ + LG + LG+ I G   + GL+  
Sbjct: 161 AKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFT 220

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           VS+  AL+ +++  G +   ++VF  M E + ++W ++I   A      +EA++ + +MR
Sbjct: 221 VSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLA-VHGRSAEALRMFYEMR 279

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGE 509
             G+ P+ VTF  +L A S   +   G  V  + I+     E   E+   ++   G+ G 
Sbjct: 280 NHGFQPDHVTFTGVLVACSHGGLVSEGWHVF-ESIRNEYGMEPLPEHYGCMVDLLGRAGL 338

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
           +++  K    M  R + + W +++   +++  +  A
Sbjct: 339 LNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELA 374



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 119/236 (50%), Gaps = 12/236 (5%)

Query: 36  LASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRA 95
           L+ A  +FD +   ++ ++  I+  +     S       K M  AG   + +    VL+A
Sbjct: 38  LSYARSIFDLIAFPDTFAFNTIIRAHADSSPSFSLSLFSK-MAMAGVSPDHFTFPFVLKA 96

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDL 155
           C        + G+ +H L+ K     D  V N LI  YG C    D A ++FEE+  RDL
Sbjct: 97  CAR-----LQTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCC-GFLDFALKVFEEMPERDL 150

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL 215
           +SW+S+I+ +++ G       LF RMQ  G   ++KP+E    S+++A   S+L    L 
Sbjct: 151 VSWSSMIACFAKNGFGYEALALFQRMQLVG---TVKPDEVIVLSVVSAI--SILGDLELG 205

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           + I   + + GL   + +G+ALV  F+R G    + ++F++M ++NV++   L+ G
Sbjct: 206 KWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALING 261



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 173/384 (45%), Gaps = 58/384 (15%)

Query: 109 QVHCLVLKSNQTFDGL-VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQ 167
           ++H  +LK+      L +  +L++   S   S   AR IF+ I   D  ++N+II  ++ 
Sbjct: 6   KLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTIIRAHAD 65

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
              + S+    S+M   G    + P+ +TF   +  A + + +G      + +++ K G 
Sbjct: 66  SSPSFSLSLF-SKMAMAG----VSPDHFTF-PFVLKACARLQTG----LDLHSLLFKLGF 115

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------- 274
            SD+YV + L+  +   G   +A K+FE+M ++++VS + ++    K             
Sbjct: 116 DSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSMIACFAKNGFGYEALALFQR 175

Query: 275 -----------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
                                        GK + G++ R+GL   V++G  LV+M+++CG
Sbjct: 176 MQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCG 235

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            I++S  VF  M  ++ ++W  +I+GL  +G   EA+  F  MR  G    + +    L 
Sbjct: 236 CIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLV 295

Query: 366 SCASLGWIMLGQQIHGEGLK--LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHD 422
           +C+  G +  G  +  E ++   G++        ++ L   AG L+   K    MP   +
Sbjct: 296 ACSHGGLVSEGWHVF-ESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPN 354

Query: 423 QVSWNSVIGAFADSEAL-VSEAVK 445
            + W +++GA  +   + ++E VK
Sbjct: 355 SIIWRTLLGACVNHNYIELAEKVK 378



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 110/215 (51%), Gaps = 10/215 (4%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  + K GF  DV++ N LI+ Y   G L  A K+F+EMP+R+ VSW+ +++ +   G 
Sbjct: 106 LHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSMIACFAKNGF 165

Query: 67  SNEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
             EA  +F+ M   G +  +   + SV+ A    G    + G  +   + ++   F   +
Sbjct: 166 GYEALALFQRMQLVGTVKPDEVIVLSVVSAISILG--DLELGKWIRGFISRNGLEFTVSL 223

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
              L+ M+  C    + + R+F+E+  R++++W ++I+  +  G +    ++F  M+  G
Sbjct: 224 GTALVDMFSRC-GCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHG 282

Query: 186 FRYSLKPNEYTF-GSLITAAYSSVLS-GSYLLQQI 218
           F    +P+  TF G L+  ++  ++S G ++ + I
Sbjct: 283 F----QPDHVTFTGVLVACSHGGLVSEGWHVFESI 313


>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 1441

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 264/842 (31%), Positives = 422/842 (50%), Gaps = 91/842 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  + K GF +  F    LI++Y +   L  A  +FD   + ++VSW  +++GY   G  
Sbjct: 165 HCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFP 224

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA K+F  M R G   ++  L +V+ A                                
Sbjct: 225 MEAVKVFDRMQRVGHAPDQITLVTVVNA-------------------------------- 252

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
                Y +     D AR++F +I   ++++WN +IS +++RG        F  +++ G  
Sbjct: 253 -----YVALGRLAD-ARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTG-- 304

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             LK    + GS+++A  S  LS       + A   K GL  ++YVGSALV+ +A+    
Sbjct: 305 --LKATRSSLGSVLSAIAS--LSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKM 360

Query: 248 YYARKIFEQMIQKNVVSMNGLMEG-----------------RRKGKE------------- 277
             A+++F  + ++N+V  N ++ G                 +R G +             
Sbjct: 361 DAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSAC 420

Query: 278 -----------VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                      +H  +I++     + V N LV+MYAK G + ++R  F  M   D+VSWN
Sbjct: 421 ASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWN 480

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            +I G  Q    +EA   F  M  +G++    SL S +S+CA++  +  GQQ H   +K+
Sbjct: 481 AIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKV 540

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
           GLD+     ++L+ +Y   G +     VF+ MP  + VS N++I  +  +   + EA+  
Sbjct: 541 GLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGY--TMGHLEEAIHL 598

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN-VANETTIENALLSCYG 505
           + +++  G  P  VTF  +L       M  LG Q+H QV+K+  +++   +  +LL  Y 
Sbjct: 599 FQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYM 658

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
                 D E +F+ +   +  V W ++ISGY       KA+     M       D   FA
Sbjct: 659 NSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFA 718

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           +VL ACA +++L+ G E+H+         D V  S+L+DMY+KCG +  + + F  MP R
Sbjct: 719 SVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRR 778

Query: 626 N-VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           N V SWNSMI G A++G+ ++AL +F QM+    +PD VTF+GVLSACSHAG V EG K 
Sbjct: 779 NNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKV 838

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           F  M   Y L+P+++   CMVD+LGR G L++ EEFINK+    + ++W T+LGA CR +
Sbjct: 839 FDLMVNNYKLLPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGA-CRKH 897

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
             +   G++AA+ L E++PQ++ +YVLL+++YA    W      R+ MK   VKK  G S
Sbjct: 898 GDEVR-GKRAADKLMELKPQSSSSYVLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYS 956

Query: 805 WV 806
           W+
Sbjct: 957 WI 958



 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 219/784 (27%), Positives = 365/784 (46%), Gaps = 50/784 (6%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK+ H + LK G      L N ++++YV+ G++  A K F  +  ++  +W  ++S Y  
Sbjct: 60  AKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLD 119

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+     + F  M       N +    VL AC   G     FG QVHC V K+   F  
Sbjct: 120 HGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACS--GLQDVNFGRQVHCGVFKTGFGFRS 177

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
                LI MY  C    D AR +F+     D +SW ++I+ Y + G  +   K+F RMQR
Sbjct: 178 FCQGGLIDMYAKCRYLRD-ARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQR 236

Query: 184 EGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            G      P++ T  +++ A  A   +     L  QI           ++   + ++SG 
Sbjct: 237 VGH----APDQITLVTVVNAYVALGRLADARKLFTQIPN--------PNVVAWNVMISGH 284

Query: 242 ARLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMV 291
           A+ G    A   F ++ +           +V+S    +     G  VH    + GL D V
Sbjct: 285 AKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNV 344

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
            VG+ LVNMYAKC  +D ++ VF  +  ++ V WN M+ G  QNG  +E +  F  M+R 
Sbjct: 345 YVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRH 404

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G     F+  S  S+CASL ++  G Q+H   +K    S++ V+NAL+ +YA +G L   
Sbjct: 405 GPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEA 464

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
            K F LM  HD VSWN++I  +   E    EA   +  M   G  P+ V+  +I++A ++
Sbjct: 465 RKQFELMKIHDNVSWNAIIVGYVQEE-YNDEAFFMFRRMVSNGVLPDEVSLASIVSACAN 523

Query: 472 FSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
               K G Q H  ++K  +   T   ++L+  Y KCG +     +F  M   R+ VS N+
Sbjct: 524 VQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPS-RNVVSVNA 582

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR-A 590
           +I+GY     L +A++L   +   G +    TFA +L  C     L  G ++H   ++  
Sbjct: 583 LIAGYTMGH-LEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWG 641

Query: 591 CLEFDVVIGSALVDMYSKCGR-IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
            L    ++  +L+ +Y    R +D  + F +L   + +  W ++ISGYA+  H +KAL  
Sbjct: 642 FLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQF 701

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ----LEQFSC-- 703
           +  M+ D  LPD   F  VL AC+       G    ++  +++ LI      +++ +C  
Sbjct: 702 YQHMRSDNILPDQAAFASVLRACA-------GMSSLQNGQEIHSLIFHTGFNMDEVTCSS 754

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP 763
           ++D+  + G++    +   +MP   N + W +++         K     +A  +  +ME 
Sbjct: 755 LIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMI-----VGLAKNGYAEEALEIFKQMEQ 809

Query: 764 QNAV 767
           Q+ +
Sbjct: 810 QSII 813



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 220/470 (46%), Gaps = 39/470 (8%)

Query: 268 LMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
           +++     K +H   ++ G+     +GN +V++Y KCG +D ++  F  +  KD  +WN+
Sbjct: 53  VLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNS 112

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           ++S    +G +   + +F  M    +  + F+    LS+C+ L  +  G+Q+H    K G
Sbjct: 113 VLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTG 172

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
                     L+ +YA   YL     VF      D VSW ++I  +   +    EAVK +
Sbjct: 173 FGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYV-RDGFPMEAVKVF 231

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
             M+R G +P+ +T + ++ A                                   Y   
Sbjct: 232 DRMQRVGHAPDQITLVTVVNA-----------------------------------YVAL 256

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
           G + D  K+F ++    + V+WN MISG+       +A++    + + G +    +  +V
Sbjct: 257 GRLADARKLFTQIP-NPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSV 315

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           LSA AS++ L  G  VHA   +  L+ +V +GSALV+MY+KC ++D A + F+ +  RN+
Sbjct: 316 LSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNI 375

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
             WN+M+ G+A++G   + +  FS MK  GP PD  TF  + SAC+    ++ G +    
Sbjct: 376 VLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTV 435

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
           M +       L   + +VD+  ++G L +  +    M I  N + W  ++
Sbjct: 436 MIK-NKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDN-VSWNAII 483


>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 565

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 221/543 (40%), Positives = 316/543 (58%), Gaps = 8/543 (1%)

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
           SN L++ Y  AG L    KVF  MP+    +WN++I      E    E +  + +M   G
Sbjct: 28  SNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFE-YNEEGLSLFREMHGLG 86

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
           +SP+  T  ++ + ++      +G Q+H   IKY +  +  + ++L   Y + G++ D E
Sbjct: 87  FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGE 146

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
            I  R    R+ V+WN++I G   N      + L   M   G R +  TF TVLS+C+ +
Sbjct: 147 -IVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDL 205

Query: 575 ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
           A   +G ++HA  ++      V + S+L+ MYSKCG +  A++ F      +   W+SMI
Sbjct: 206 AIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMI 265

Query: 635 SGYARHGHGDKALTLFSQMKLDGPLP-DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           S Y  HG GD+A+ LF+ M     +  + V F+ +L ACSH+GL D+G + F  M + YG
Sbjct: 266 SAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYG 325

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT-ELGR 752
             P L+ ++C+VDLLGRAG LD+ E  I  MPI P+ +IW+T+L AC   N  K  E+ +
Sbjct: 326 FKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSAC---NIHKNAEMAQ 382

Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
           K    + E++P ++  YVLLAN++AS  +W DV++ RK+M++  VKKEAG SW   K  V
Sbjct: 383 KVFKEILEIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEV 442

Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
           H F  GD S  +   IY  LKEL  +M+  GY P T   L D++ E KE  +  HSEK+A
Sbjct: 443 HQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLA 502

Query: 873 VAFVL-TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
           VAF L       PIRI+KNLRVC DCH AFK+IS I+ REI LRD +RFHHF +GKCSCG
Sbjct: 503 VAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIMNREITLRDGSRFHHFINGKCSCG 562

Query: 932 DYW 934
           DYW
Sbjct: 563 DYW 565



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 158/342 (46%), Gaps = 44/342 (12%)

Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---------------------- 274
           L++G+ R G+   ARK+F++M  + + + N ++ G  +                      
Sbjct: 31  LINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGFSPD 90

Query: 275 -------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFR 315
                              G+++HGY I+ GL   + V + L +MY + G + D   V R
Sbjct: 91  EYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150

Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
            M  ++ V+WNT+I G  QNGC E  +  +  M+  G   +  + ++ LSSC+ L     
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           GQQIH E +K+G  S V+V ++L+S+Y+  G L    K F    + D+V W+S+I A+  
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYG- 269

Query: 436 SEALVSEAVKYYLDM-RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANE 493
                 EA+K +  M  +     N V F+N+L A S   +   G ++   ++ KY     
Sbjct: 270 FHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPG 329

Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
                 ++   G+ G +D  E I   M  + D V W +++S 
Sbjct: 330 LKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSA 371



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 153/352 (43%), Gaps = 53/352 (15%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N LIN YVR GDL SA K+FDEMPDR   +W  +++G      + E   +F+EM   GF 
Sbjct: 29  NILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGFS 88

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
            + Y LGSV       G      G Q+H   +K     D +V++ L  MY    +  D  
Sbjct: 89  PDEYTLGSVFSG--SAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQD-G 145

Query: 144 RRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA 203
             +   +  R+L++WN++I   +Q G   +V  L+  M+  G R    PN+ TF +++++
Sbjct: 146 EIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCR----PNKITFVTVLSS 201

Query: 204 AYSSVLSGSYLLQQI-------------------LAMVKKAGLLSDL------------Y 232
                + G    QQI                   ++M  K G L D              
Sbjct: 202 CSDLAIRGQG--QQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEV 259

Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSG--LFDM 290
           + S+++S +   G    A K+F  M ++  + +N +          H  L   G  LFDM
Sbjct: 260 MWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDM 319

Query: 291 VAVGNG----------LVNMYAKCGTIDDSRSVFRFM-IGKDSVSWNTMISG 331
           +    G          +V++  + G +D + ++ + M I  D V W T++S 
Sbjct: 320 MVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSA 371



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 110/251 (43%), Gaps = 7/251 (2%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K+G   D+ + ++L ++Y+R G L     +   MP RN V+W  ++ G    G 
Sbjct: 113 IHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGC 172

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
                 ++K M  +G   N+    +VL +C +    G   G Q+H   +K   +    V 
Sbjct: 173 PETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRG--QGQQIHAEAIKIGASSVVAVV 230

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + LI+MY  C    D A + F E E  D + W+S+IS Y   G      KLF+ M  +  
Sbjct: 231 SSLISMYSKCGCLGDAA-KAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQT- 288

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              ++ NE  F +L+ A   S L     L+    MV+K G    L   + +V    R G 
Sbjct: 289 --EMEVNEVAFLNLLYACSHSGLKDKG-LELFDMMVEKYGFKPGLKHYTCVVDLLGRAGC 345

Query: 247 FYYARKIFEQM 257
              A  I + M
Sbjct: 346 LDQAEAIIKSM 356


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 219/632 (34%), Positives = 361/632 (57%), Gaps = 18/632 (2%)

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN-----------VVSMNGLMEGRRKGK 276
           L ++   ++++SG++R G    A  ++ QM++             V S +GL +  +  +
Sbjct: 161 LKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGL-DDFKLAR 219

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           ++H ++++S     +   N L++MY K   + D+ +VF  +I KD +SW +MI+G  Q G
Sbjct: 220 QLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLG 279

Query: 337 CYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
              EA+ +F  M    +   N F   S  S+C+ L     G+QIHG  +K GL SD+   
Sbjct: 280 YELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAG 339

Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
            +L  +YA  G+L     VF+ + + D V+WN++I  FA S +   E+  ++  MR  G 
Sbjct: 340 CSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFA-SVSNAKESSSFFSQMRHTGL 398

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
            PN VT +++L A S   M   G QVH+ ++K     +  + N+LLS Y KC  ++D  +
Sbjct: 399 VPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQ 458

Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
           +F  +  + D VSWN++++  +      + + L   M     + DH T   VL +   +A
Sbjct: 459 VFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIA 518

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
           + E G ++H   +++ L  D+ + +AL++MY+KCG ++ A + FD +   ++ SW+S+I 
Sbjct: 519 SYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIV 578

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
           GYA+ G G +A  LF  M+  G  P+ +TFVG+L+ACSH G+V+EG K +++M + Y + 
Sbjct: 579 GYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRIS 638

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKA 754
           P  E  SCMVDLL RAG LD  E+FI +MP  P+ ++W+T+L AC    N    E+G++A
Sbjct: 639 PTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGN---LEVGKRA 695

Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
           A  + +++P N+   V+L N++AS G W+D A+ R +M+  +V K  G SW+ +KD VHV
Sbjct: 696 AENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHV 755

Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAGYVP 846
           F+A D  HPE+  IY  L+EL  ++ D G  P
Sbjct: 756 FLAEDNLHPERGKIYTMLEELMLQILDDGCDP 787



 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 162/572 (28%), Positives = 273/572 (47%), Gaps = 52/572 (9%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +L   +  D+ L N ++++Y + G L  A  +FD MP +N VSW  ++SGY+  G 
Sbjct: 120 IHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGE 179

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            + A  ++ +M+R+G + + +  GS++++C   G   FK   Q+H  VLKS    D +  
Sbjct: 180 EDNAITLYVQMLRSGHIPDHFTFGSIVKSCS--GLDDFKLARQLHAHVLKSEFGADLIAQ 237

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           N LI+MY    +  D A  +F  I  +DLISW S+I+ +SQ G  +     F  M  +  
Sbjct: 238 NALISMYTKFSQMAD-AINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSV 296

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
               +PNE+ FGS  +A   S L      +QI  +  K GL SDL+ G +L   +A+ G 
Sbjct: 297 ---YQPNEFVFGSAFSAC--SKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGF 351

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG----------------------------------- 271
              AR +F  + + ++V+ N ++ G                                   
Sbjct: 352 LESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCA 411

Query: 272 ------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK-DSVS 324
                    G +VH Y+++ G    + V N L++MY+KC  ++D+  VF  +  K D VS
Sbjct: 412 CSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVS 471

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           WNT+++   Q     E +     M    +   + +L + L S   +    +G QIH   +
Sbjct: 472 WNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIM 531

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           K GL+ D+SVSNAL+++Y   G L    K+F  +   D +SW+S+I  +A +     EA 
Sbjct: 532 KSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQA-GCGKEAF 590

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSC 503
           + +  MR  G  PN +TF+ IL A S   M + G +++  + + Y ++      + ++  
Sbjct: 591 ELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDL 650

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             + G +D  E    +M    D V W ++++ 
Sbjct: 651 LARAGCLDVAEDFIKQMPFVPDVVVWKTLLAA 682



 Score =  229 bits (584), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 165/630 (26%), Positives = 305/630 (48%), Gaps = 67/630 (10%)

Query: 64  KGMSNEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
           K +  EA K F    + +   L       ++ AC        + G ++H  +L  N   D
Sbjct: 75  KNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSL--RSLEHGRKIHRHMLTCNYQPD 132

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
            ++ N +++MYG C  S   AR +F+ +  ++++SW S+IS YS+ G+  +   L+ +M 
Sbjct: 133 MILQNHILSMYGKC-GSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQML 191

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           R G      P+ +TFGS++ +   S L    L +Q+ A V K+   +DL   +AL+S + 
Sbjct: 192 RSGH----IPDHFTFGSIVKSC--SGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYT 245

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---------------------------- 274
           +      A  +F ++I K+++S   ++ G  +                            
Sbjct: 246 KFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFG 305

Query: 275 --------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
                         G+++HG  I+ GL   +  G  L +MYAKCG ++ +R+VF  +   
Sbjct: 306 SAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKP 365

Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
           D V+WN +I+G       +E+   F  MR  GL+ ++ +++S L +C+    +  G Q+H
Sbjct: 366 DLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVH 425

Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF-LMPEHDQVSWNSVIGAFADSEAL 439
              +K+G + D+ V N+LLS+Y+    L+  L+VF  +  + D VSWN+++ A       
Sbjct: 426 SYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQ- 484

Query: 440 VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENA 499
             E ++    M  +   P+ VT  N+L ++   +  ++G Q+H  ++K  +  + ++ NA
Sbjct: 485 AGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNA 544

Query: 500 LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRL 559
           L++ Y KCG ++   K+F  +    D +SW+S+I GY       +A  L   M   G + 
Sbjct: 545 LINMYTKCGSLECARKMFDSIGN-PDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKP 603

Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG------SALVDMYSKCGRID 613
           +  TF  +L+AC+ +  +E G++++       ++ D  I       S +VD+ ++ G +D
Sbjct: 604 NEITFVGILTACSHIGMVEEGLKLY-----RTMQEDYRISPTKEHCSCMVDLLARAGCLD 658

Query: 614 YASRFFDLMP-VRNVYSWNSMISGYARHGH 642
            A  F   MP V +V  W ++++    HG+
Sbjct: 659 VAEDFIKQMPFVPDVVVWKTLLAACKVHGN 688



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/543 (24%), Positives = 261/543 (48%), Gaps = 27/543 (4%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+++H +++       + + N +++MY KCG++ ++R++F  M  K+ VSW +MISG  +
Sbjct: 117 GRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSR 176

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G  + AI  +  M R G +  +F+  S + SC+ L    L +Q+H   LK    +D+  
Sbjct: 177 YGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIA 236

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDM-RRA 453
            NAL+S+Y     ++  + VF  +   D +SW S+I  F+     + EA+ ++ +M  ++
Sbjct: 237 QNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYEL-EALCHFREMLSQS 295

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
            + PN   F +  +A S       G Q+H   IK+ + ++     +L   Y KCG ++  
Sbjct: 296 VYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESA 355

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
             +F  + E+ D V+WN++I+G+       ++ +    M   G   +  T  ++L AC+ 
Sbjct: 356 RTVFYHI-EKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSE 414

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF-DLMPVRNVYSWNS 632
              L  G++VH+  V+     D+ + ++L+ MYSKC  ++ A + F D+    ++ SWN+
Sbjct: 415 PVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNT 474

Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
           +++   +     + L L   M      PDHVT   VL +       + G       SQ++
Sbjct: 475 LLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVG-------SQIH 527

Query: 693 ------GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
                 GL   +   + ++++  + G L+   +  + +   P+ + W +++    +A C 
Sbjct: 528 CFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIG-NPDIISWSSLIVGYAQAGCG 586

Query: 747 KT--ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKE----AEVKKE 800
           K   EL R    +   ++P N + +V +    +  G  E+  K  + M+E    +  K+ 
Sbjct: 587 KEAFELFRTMRGL--GVKP-NEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEH 643

Query: 801 AGC 803
             C
Sbjct: 644 CSC 646



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 223/485 (45%), Gaps = 72/485 (14%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K A+  H  +LK  F  D+   N LI++Y +   +A A  +F  +  ++ +SW  +++G+
Sbjct: 216 KLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGF 275

Query: 62  THKGMSNEACKMFKEMV-RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
           +  G   EA   F+EM+ ++ +  N +  GS   AC +        G Q+H L +K    
Sbjct: 276 SQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEP--DCGRQIHGLCIKFGLG 333

Query: 121 FDGLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
            D      L  MY  C  LES   AR +F  IE  DL++WN+II+ ++   +       F
Sbjct: 334 SDLFAGCSLCDMYAKCGFLES---ARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFF 390

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
           S+M+  G    L PN+ T  SL+ A    V+    +  Q+ + + K G   D+ V ++L+
Sbjct: 391 SQMRHTG----LVPNDVTVLSLLCACSEPVMLNHGI--QVHSYIVKMGFNLDIPVCNSLL 444

Query: 239 SGFARLGNFYYARKIFEQMIQK-------------------------------------- 260
           S +++  N   A ++FE +  K                                      
Sbjct: 445 SMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDH 504

Query: 261 ----NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
               NV+  +G +     G ++H ++++SGL   ++V N L+NMY KCG+++ +R +F  
Sbjct: 505 VTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDS 564

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           +   D +SW+++I G  Q GC +EA   F  MR  G+  +  + +  L++C+ +G +   
Sbjct: 565 IGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMV--- 621

Query: 377 QQIHGEGLKL--GLDSDVSVS------NALLSLYADAGYLSRCLKVFFLMP-EHDQVSWN 427
                EGLKL   +  D  +S      + ++ L A AG L         MP   D V W 
Sbjct: 622 ----EEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWK 677

Query: 428 SVIGA 432
           +++ A
Sbjct: 678 TLLAA 682



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 210/421 (49%), Gaps = 12/421 (2%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           +++C+SL  +  G++IH   L      D+ + N +LS+Y   G L     +F  MP  + 
Sbjct: 105 INACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNV 164

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
           VSW S+I  ++        A+  Y+ M R+G  P+  TF +I+ + S     KL  Q+HA
Sbjct: 165 VSWTSMISGYS-RYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHA 223

Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
            V+K     +   +NAL+S Y K  +M D   +F+R+   +D +SW SMI+G+  ++L  
Sbjct: 224 HVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRII-IKDLISWGSMIAGF--SQLGY 280

Query: 544 KAMNLVWF---MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
           +   L  F   + Q   + + F F +  SAC+ +   + G ++H   ++  L  D+  G 
Sbjct: 281 ELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGC 340

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           +L DMY+KCG ++ A   F  +   ++ +WN++I+G+A   +  ++ + FSQM+  G +P
Sbjct: 341 SLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVP 400

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           + VT + +L ACS   +++ G +    + ++ G    +   + ++ +  +   L+   + 
Sbjct: 401 NDVTVLSLLCACSEPVMLNHGIQVHSYIVKM-GFNLDIPVCNSLLSMYSKCSNLNDALQV 459

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
              +    + + W T+L AC + N     L          ++P    ++V L N+  S G
Sbjct: 460 FEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKP----DHVTLTNVLVSSG 515

Query: 781 K 781
           +
Sbjct: 516 Q 516



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 148/299 (49%), Gaps = 5/299 (1%)

Query: 442 EAVKYYLDMRRAGWSP-NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
           EA+K +   ++   SP   VT+ +++ A SS    + G ++H  ++  N   +  ++N +
Sbjct: 80  EALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHI 139

Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD 560
           LS YGKCG + +   +F  M   ++ VSW SMISGY        A+ L   M++ G   D
Sbjct: 140 LSMYGKCGSLKEARNMFDSM-PLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPD 198

Query: 561 HFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFD 620
           HFTF +++ +C+ +   +   ++HA  +++    D++  +AL+ MY+K  ++  A   F 
Sbjct: 199 HFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFS 258

Query: 621 LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVD 679
            + ++++ SW SMI+G+++ G+  +AL  F +M       P+   F    SACS     D
Sbjct: 259 RIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPD 318

Query: 680 EGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLG 738
            G +    +   +GL   L     + D+  + G L+        +   P+ + W  ++ 
Sbjct: 319 CG-RQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIE-KPDLVAWNAIIA 375



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 10/169 (5%)

Query: 531 SMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA 590
           S+    +H E L KA ++  F       L   T+  +++AC+S+ +LE G ++H   +  
Sbjct: 71  SLCKKNLHREAL-KAFDI--FQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTC 127

Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
             + D+++ + ++ MY KCG +  A   FD MP++NV SW SMISGY+R+G  D A+TL+
Sbjct: 128 NYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLY 187

Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
            QM   G +PDH TF  ++ +CS       G   FK   Q++  + + E
Sbjct: 188 VQMLRSGHIPDHFTFGSIVKSCS-------GLDDFKLARQLHAHVLKSE 229


>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
 gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
          Length = 744

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 221/595 (37%), Positives = 340/595 (57%), Gaps = 47/595 (7%)

Query: 384 LKLGLDSD-------VSVSNA-----LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
           ++LGL +D       + V +A     L+S  A  G L     +    P  D +SW S+I 
Sbjct: 153 IRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIA 212

Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVA 491
           A++ +     EAV  +  M   G +P+ VT I +L+A +     +LG  +H  V +  + 
Sbjct: 213 AYSRANR-AREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMP 271

Query: 492 NETTIENALLSCYGKCGEMDDCEKIFARMS------------------------------ 521
               +  AL+  Y KCG+    +++F  +                               
Sbjct: 272 TSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDE 331

Query: 522 -ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
            E RD +++NSM++GYIH+  L +A+ L   M +   R+D+FT   +L+ACAS+  L++G
Sbjct: 332 MEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQG 391

Query: 581 MEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
             +HAC  +  +E D+ +G+AL+DMY KCGR+D A+  F  M  R+V++W +MI+G A +
Sbjct: 392 RALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFN 451

Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
           G G  AL  F QM+ DG  P+ V+++ VL+ACSH+ L++EG  +F  M  +Y + PQ+E 
Sbjct: 452 GMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEH 511

Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
           + CM+DLLGR+G LD+  + +  MPI PN++IW ++L A CR + +  +L + AA  L +
Sbjct: 512 YGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSA-CRVH-KHIDLAQCAAEHLLK 569

Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
           +EP     YV L N+Y    +WE+ +K R  M+E +VKK AG S +T+   VH FV  D+
Sbjct: 570 LEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDK 629

Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTR 879
           SHP    I   L+E++ +++  GY P T     D++ E KE  +  HSEK+A+AF ++  
Sbjct: 630 SHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLINL 689

Query: 880 NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
              LP+ I KNLRVC DCHSA K IS++  REI++RD +RFHHF +G CSC D+W
Sbjct: 690 APNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFREGTCSCNDFW 744



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 132/549 (24%), Positives = 248/549 (45%), Gaps = 71/549 (12%)

Query: 22  LCNTLIN-VYVRVGDLASASKLFDEMPDR----NSVSWACIVSGYTHKGMSNEACKMFKE 76
           L N+L+N +      L  A  LFD MP      ++   AC  +G       +    +F+ 
Sbjct: 38  LLNSLVNCLEPHPLHLRYALHLFDRMPPSTFLFDTALRACSRAGSD----PHRPFLLFRR 93

Query: 77  MVRAGFLLNRYALGSVLRACQECG-PSGFKFGMQVHCLVLKSN-QTFDGLVSNVLIAMYG 134
           M RAG   + +    + +       P        +H   L++   +    VSN LI MY 
Sbjct: 94  MRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYI 153

Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRG---------------DTIS---VFK 176
               + D ARR F+EI  +D ++W  +IS  ++ G               D IS   +  
Sbjct: 154 RLGLAAD-ARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIA 212

Query: 177 LFSRMQREG---------FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
            +SR  R             + + P+E T  ++++A   + L    L + +  +V++ G+
Sbjct: 213 AYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSAC--AKLKDLELGRSLHLLVEEKGM 270

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGL 287
            +   +  AL+  +A+ G+F +A+++F+ +             GR  G     +      
Sbjct: 271 PTSENLVVALIDMYAKCGDFGHAQQVFDAL-------------GR--GPRPQSW------ 309

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
                  N +++ Y K G +D +RS+F  M  +D +++N+M++G   +G   EA++ F +
Sbjct: 310 -------NAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMS 362

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           MRR  L   NF++++ L++CASLG +  G+ +H    +  +++D+ +  ALL +Y   G 
Sbjct: 363 MRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGR 422

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +     VF  M + D  +W ++I   A    +   A++++  MR  G+ PN V++I +L 
Sbjct: 423 VDEATIVFQRMGKRDVHTWTAMIAGLA-FNGMGKAALEHFYQMRCDGFQPNSVSYIAVLT 481

Query: 468 AASSFSMGKLGHQVHAQV-IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           A S   +   G     ++ I YN+  +      ++   G+ G +D+   +   M  + + 
Sbjct: 482 ACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNA 541

Query: 527 VSWNSMISG 535
           V W S++S 
Sbjct: 542 VIWASILSA 550



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 195/474 (41%), Gaps = 87/474 (18%)

Query: 21  FLCNTLINVYVRVGDLASASKLFDEM-------------------------------PDR 49
           F+ N+LI++Y+R+G  A A + FDE+                               P R
Sbjct: 143 FVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVR 202

Query: 50  NSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQ 109
           + +SW  +++ Y+    + EA   FK M+  G   +   + +VL AC +      + G  
Sbjct: 203 DVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKL--KDLELGRS 260

Query: 110 VHCLV-LKSNQTFDGLVSNVLIAMYGSCLE------------------------------ 138
           +H LV  K   T + LV   LI MY  C +                              
Sbjct: 261 LHLLVEEKGMPTSENLVV-ALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKH 319

Query: 139 -STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
              D AR +F+E+E RD+I++NS+++ Y   G       LF  M+    R+ L+ + +T 
Sbjct: 320 GHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMR----RHDLRVDNFTV 375

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
            +L+TA  S  L      + + A +++  + +D+Y+G+AL+  + + G    A  +F++M
Sbjct: 376 VNLLTACAS--LGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRM 433

Query: 258 IQKNVVSMNGLMEGRR-----KGKEVHGYLIRSGLFDMVAVGN-GLVNMYAKCGTIDDSR 311
            +++V +   ++ G       K    H Y +R   F   +V    ++   +    +++ R
Sbjct: 434 GKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGR 493

Query: 312 SVFRFM-----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSS 366
             F  M     I      +  MI  L ++G  +EA+     M    +  +     S LS+
Sbjct: 494 LYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTM---PIQPNAVIWASILSA 550

Query: 367 CASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
           C     I L Q      LKL  D D  V   L ++Y D+       K+  LM E
Sbjct: 551 CRVHKHIDLAQCAAEHLLKLEPDED-GVYVQLYNIYIDSRQWENASKIRMLMEE 603



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/293 (20%), Positives = 117/293 (39%), Gaps = 44/293 (15%)

Query: 543 PKAMNLVWFMMQR-GQRLDHFTFATVLSACASVATLERGM----EVHACGVRACLEFDV- 596
           P    L++  M+R G R D FTF   L  C+S ++    +     +HA  +R  L     
Sbjct: 84  PHRPFLLFRRMRRAGVRPDGFTF-HFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAP 142

Query: 597 VIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISG-------------------- 636
            + ++L+ MY + G    A R FD + V++  +W  +ISG                    
Sbjct: 143 FVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVR 202

Query: 637 -----------YARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
                      Y+R     +A+  F  M   G  PD VT + VLSAC+    ++ G +  
Sbjct: 203 DVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELG-RSL 261

Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANC 745
             + +  G+         ++D+  + G+    ++  + +   P    W  ++   C+   
Sbjct: 262 HLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHG- 320

Query: 746 RKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVK 798
              ++ R   ++  EME ++ + +  +   Y   G+  +      +M+  +++
Sbjct: 321 -HVDVAR---SLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLR 369



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 47/95 (49%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H  I +     D++L   L+++Y++ G +  A+ +F  M  R+  +W  +++G 
Sbjct: 389 QQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGL 448

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRAC 96
              GM   A + F +M   GF  N  +  +VL AC
Sbjct: 449 AFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTAC 483


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 248/711 (34%), Positives = 385/711 (54%), Gaps = 52/711 (7%)

Query: 190 LKP-NEYTFGSLITAAYS-SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           L P N  +F SL+   +  S+  G  L  QI   +K A   S +Y+ ++L++ +A+  + 
Sbjct: 3   LHPQNLSSFNSLVQFTHQKSLQKGRALHAQI---IKLASSSSCIYLANSLINFYAKCCHL 59

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------------- 274
             A+ +F+++  K+V+S N L+ G  +                                 
Sbjct: 60  PKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFT 119

Query: 275 ----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                     G++ H   I+   F  V VG+ L+NMY K G + ++R VF  M  ++ V+
Sbjct: 120 AASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVT 179

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W TMISG        EA   F  MRR+    + F+  S LS+ A   ++  G+QIH   +
Sbjct: 180 WATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAV 239

Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
           K GL   +S+ NAL+++YA  G L   L+VF +  + + ++W+++I  +A S     +A+
Sbjct: 240 KTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQS-GDSHKAL 298

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
           K +  M  AG +P+  T + +L A S     + G QVH  ++K    ++  I  AL+  Y
Sbjct: 299 KLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMY 358

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            K G  +D  K F  + ++ D V W SMI+GY+ N     A++L   M   G   +  T 
Sbjct: 359 AKSGVTEDARKGFNYL-QQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTM 417

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
           A+VL AC+++A  ++G ++HA  ++  L  +V IGSAL  MY+KCG ++  +  F  MP 
Sbjct: 418 ASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPE 477

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           R++ SWN+MISG +++G+G +AL LF +M+     PD VTFV VLSACSH GLVD G+ +
Sbjct: 478 RDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLY 537

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           F+ M   +GL+P++E ++CMVD+L RAG+L + +EFI    I     +WR +LGAC   N
Sbjct: 538 FRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGAC--RN 595

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
            R  ELG  A   L E+  Q +  YVLL+ +Y + G+ EDV + R  MK   V KE GCS
Sbjct: 596 YRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCS 655

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
           W+ +K  VHVFV GD+ HP    I  ++  L+++M+D GY P +    +D 
Sbjct: 656 WIELKSNVHVFVVGDQMHPCIGEIRTEILRLSKQMKDEGYQPASVTDSYDF 706



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 257/516 (49%), Gaps = 60/516 (11%)

Query: 2   KDAKLFHLQILKHGFAYD-VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
           +  +  H QI+K   +   ++L N+LIN Y +   L  A  +FD + +++ +SW C+++G
Sbjct: 24  QKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLING 83

Query: 61  YTHKGMSNEA--CKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
           Y+ +G +  +   ++F+ M     L N +    +  A      S   FG Q H + +K  
Sbjct: 84  YSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNL--SSIFFGQQAHAVAIKMA 141

Query: 119 QTFDGLVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVF 175
             +D  V + L+ MY   G   E    AR +F+ +  R+ ++W ++IS Y+ +      F
Sbjct: 142 CFYDVFVGSSLLNMYCKAGLLFE----AREVFDRMPERNEVTWATMISGYAIQRLAGEAF 197

Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS 235
           ++F  M+RE        NE+ F S+++A        S   +QI  +  K GLL  L + +
Sbjct: 198 EVFELMRRE----EEDVNEFAFTSVLSALAVPEFVDSG--KQIHCLAVKTGLLVFLSILN 251

Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------------------- 272
           ALV+ +A+ G+   + ++FE    KN ++ + ++ G                        
Sbjct: 252 ALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINP 311

Query: 273 ------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
                              +GK+VH YL++ G    + +   LV+MYAK G  +D+R  F
Sbjct: 312 SEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGF 371

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
            ++   D V W +MI+G  QNG  E+A+  +C M+ +G++ +  ++ S L +C++L    
Sbjct: 372 NYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFD 431

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
            G+QIH   +K GL  +V++ +AL ++YA  G L     VF  MPE D +SWN++I   +
Sbjct: 432 QGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLS 491

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
            +     EA++ + +MR+    P+ VTF+N+L+A S
Sbjct: 492 QN-GYGKEALELFEEMRQQDTKPDDVTFVNVLSACS 526



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 208/409 (50%), Gaps = 54/409 (13%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H   +K    YDVF+ ++L+N+Y + G L  A ++FD MP+RN V+WA ++SGY  + ++
Sbjct: 134 HAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLA 193

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA ++F+ M R    +N +A  SVL A     P     G Q+HCL +K+       + N
Sbjct: 194 GEAFEVFELMRREEEDVNEFAFTSVLSAL--AVPEFVDSGKQIHCLAVKTGLLVFLSILN 251

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L+ MY  C  S D + ++FE    ++ I+W+++I+ Y+Q GD+    KLFSRM   G  
Sbjct: 252 ALVTMYAKC-GSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAG-- 308

Query: 188 YSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
             + P+E+T   ++ A     +V  G    +Q+   + K G  S LY+ +ALV  +A+ G
Sbjct: 309 --INPSEFTLVGVLNACSDACAVEEG----KQVHNYLLKLGFESQLYIMTALVDMYAKSG 362

Query: 246 NFYYARKIFEQMIQKNVV-------------------------SMNGLMEGR-------- 272
               ARK F  + Q ++V                          M G++           
Sbjct: 363 VTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLK 422

Query: 273 --------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                    +G+++H   I+ GL   V +G+ L  MYAKCG +++   VFR M  +D +S
Sbjct: 423 ACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIIS 482

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           WN MISGL QNG  +EA+  F  MR+      + + ++ LS+C+ +G +
Sbjct: 483 WNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLV 531



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 154/319 (48%), Gaps = 15/319 (4%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H   +K G    + + N L+ +Y + G L  + ++F+   D+NS++W+ +++GY   
Sbjct: 232 KQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQS 291

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G S++A K+F  M  AG   + + L  VL AC +      + G QVH  +LK        
Sbjct: 292 GDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDA--CAVEEGKQVHNYLLKLGFESQLY 349

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           +   L+ MY     + D AR+ F  ++  DL+ W S+I+ Y Q G+      L+ RMQ E
Sbjct: 350 IMTALVDMYAKSGVTED-ARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQME 408

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G    + PNE T  S++ A   S L+     +QI A   K GL  ++ +GSAL + +A+ 
Sbjct: 409 G----ILPNELTMASVLKAC--SNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKC 462

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRK---GKEVHGYLIRSGLFDMVAVGNGLVNMY 301
           GN      +F +M +++++S N ++ G  +   GKE           D        VN+ 
Sbjct: 463 GNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVL 522

Query: 302 AKC---GTIDDSRSVFRFM 317
           + C   G +D     FR M
Sbjct: 523 SACSHMGLVDSGWLYFRMM 541



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 127/257 (49%), Gaps = 14/257 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           ++ K  H  +LK GF   +++   L+++Y + G    A K F+ +   + V W  +++GY
Sbjct: 330 EEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGY 389

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
              G + +A  ++  M   G L N   + SVL+AC     + F  G Q+H   +K     
Sbjct: 390 VQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNL--AAFDQGRQIHARTIKYGLGL 447

Query: 122 DGLVSNVLIAMYGSC--LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
           +  + + L  MY  C  LE  +    +F  +  RD+ISWN++IS  SQ G      +LF 
Sbjct: 448 EVTIGSALSTMYAKCGNLEEGNI---VFRRMPERDIISWNAMISGLSQNGYGKEALELFE 504

Query: 180 RMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALV 238
            M+++      KP++ TF ++++A ++  ++   +L  ++  M  + GLL  +   + +V
Sbjct: 505 EMRQQ----DTKPDDVTFVNVLSACSHMGLVDSGWLYFRM--MFDEFGLLPKVEHYACMV 558

Query: 239 SGFARLGNFYYARKIFE 255
              +R G  Y A++  E
Sbjct: 559 DVLSRAGKLYEAKEFIE 575


>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 768

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 243/752 (32%), Positives = 393/752 (52%), Gaps = 79/752 (10%)

Query: 104 FKFGMQVHCLVLKSNQ-----TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISW 158
           F  G  VH  +L S+        + ++SN LI MYG C  + D AR +F+ +  R+ +SW
Sbjct: 56  FPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRC-AAPDSARMVFDGMLDRNPVSW 114

Query: 159 NSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQI 218
            ++I+ ++Q         LFS M R G      P+E+  GS + A               
Sbjct: 115 AAVIAAHAQNSRCADAMGLFSSMLRLG----TAPDEFALGSAVRAC-------------- 156

Query: 219 LAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEV 278
                                  A LG+    R++  Q I+ +    NG           
Sbjct: 157 -----------------------AELGDLGLGRQVHAQAIKSD----NG----------- 178

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
            G+LI         V N LV MY+K G++ D  ++F  +  KD  SW ++I+GL Q G  
Sbjct: 179 -GHLI---------VQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGRE 228

Query: 339 EEAIMNFCAMRRDGLMSSN-FSLISTLSSCAS-LGWIMLGQQIHGEGLKLGLDSDVSVSN 396
            +A+  F  M  +G+   N F   S   +C+  +  +  G+QIHG  +K  LD +     
Sbjct: 229 MDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGC 288

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           +L  +YA    L   +KVF+ +   D VSWNS+I AF+ ++ L+SEA+  + +MR +   
Sbjct: 289 SLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFS-ADGLLSEAMVLFSEMRYSSLK 347

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
           P+G+T + +L A       + G  +H+ ++K  +  +  + N+L+S Y +C +      +
Sbjct: 348 PDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDV 407

Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
           F   ++R D V+WNS+++  + +  +     L   +      LD  +   VLSA A +  
Sbjct: 408 FHETNDR-DVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGY 466

Query: 577 LERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSMIS 635
            E   +VHA   +  L  D ++ +AL+D Y+KCG +D A++ F++M   R+V+SW+S+I 
Sbjct: 467 FEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIV 526

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
           GYA+ G+  +AL LF++M+  G  P+HVTFVGVL ACS  GLVDEG  ++  M   YG++
Sbjct: 527 GYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIV 586

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           P  E  SC++DLL RAG L +  +F+++MP  P+ ++W T+L A    N    E+G++AA
Sbjct: 587 PTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHN--DVEMGKRAA 644

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
             +  ++P ++  YVLL N+YAS G W + A+ +K M+ + V+K  G SW+ +K  + VF
Sbjct: 645 EGVLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGELKVF 704

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQ 847
           +  D SHPE D +Y  L  +  +M  AGY+P+
Sbjct: 705 IVEDRSHPESDEMYTMLDLIGFEMVKAGYIPE 736



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 168/581 (28%), Positives = 265/581 (45%), Gaps = 55/581 (9%)

Query: 8   HLQILKHGFAY---DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           HL     G AY   +  L N LI +Y R     SA  +FD M DRN VSWA +++ +   
Sbjct: 65  HLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQN 124

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
               +A  +F  M+R G   + +ALGS +RAC E G  G   G QVH   +KS+     +
Sbjct: 125 SRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLG--LGRQVHAQAIKSDNGGHLI 182

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V N L+ MY       D    +FE I  +DL SW SII+  +Q+G  +    +F  M  E
Sbjct: 183 VQNALVTMYSKSGSVGD-GFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAE 241

Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
           G  +   PNE+ FGS+  A  S V++     +QI  +  K  L  + Y G +L   +AR 
Sbjct: 242 GMHH---PNEFHFGSVFRAC-SVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARC 297

Query: 245 GNFYYARKIFEQMIQKNVVSMNGLM----------------------------------- 269
                A K+F ++   ++VS N L+                                   
Sbjct: 298 NKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALL 357

Query: 270 ------EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
                 +  R+G+ +H YL++ GL   V V N L++MY +C     +  VF     +D V
Sbjct: 358 CACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVV 417

Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
           +WN++++   Q+   E+    F  +          SL + LS+ A LG+  + +Q+H   
Sbjct: 418 TWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYA 477

Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE-HDQVSWNSVIGAFADSEALVSE 442
            K+GL SD  +SNAL+  YA  G L    K+F +M    D  SW+S+I  +A       E
Sbjct: 478 FKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQF-GYAKE 536

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-IKYNVANETTIENALL 501
           A+  +  MR  G  PN VTF+ +L A S   +   G   ++ +  +Y +       + ++
Sbjct: 537 ALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVI 596

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
               + G + +  K   +M    D + WN++++    HN++
Sbjct: 597 DLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDV 637



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 149/316 (47%), Gaps = 17/316 (5%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  +  H  ++K G   DV +CN+LI++Y R  D  SA  +F E  DR+ V+W  I++  
Sbjct: 367 RQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTAC 426

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
                  +  K+F+ +  +   L+R +L +VL A  E G   F+   QVH    K     
Sbjct: 427 VQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGY--FEMAKQVHAYAFKVGLVS 484

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIET-RDLISWNSIISVYSQRGDTISVFKLFSR 180
           D ++SN LI  Y  C  S D A ++FE + T RD+ SW+S+I  Y+Q G       LF+R
Sbjct: 485 DAILSNALIDTYAKC-GSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFAR 543

Query: 181 MQREGFRYSLKPNEYTF-GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           M+  G    +KPN  TF G LI  +   ++        I  M  + G++      S ++ 
Sbjct: 544 MRNLG----VKPNHVTFVGVLIACSRVGLVDEGCYYYSI--MEPEYGIVPTKEHCSCVID 597

Query: 240 GFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG- 296
             AR G    A K  +QM  + +++  N L+   R   +V  G     G+ ++    +  
Sbjct: 598 LLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAA 657

Query: 297 ---LVNMYAKCGTIDD 309
              L N+YA  G  ++
Sbjct: 658 YVLLCNIYASSGNWNE 673


>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 640

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 242/631 (38%), Positives = 354/631 (56%), Gaps = 63/631 (9%)

Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL----KV 414
           SL   +++C ++  +    QIH   +K G   D   +  +L   A +    R L    K+
Sbjct: 18  SLFPQINTCRTIRDL---SQIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKI 74

Query: 415 FFLMPEHDQVSWNSVIGAFADSE---ALVSEAVKYYLDMRRAGW-SPNGVTFINILAAAS 470
           F  MP+ +  SWN++I  F++S+   AL+  A+  + +M    +  PN  TF ++L A +
Sbjct: 75  FNQMPQRNCFSWNTIIRGFSESDEDKALI--AITLFCEMMSDEFIEPNRFTFPSVLKACA 132

Query: 471 SFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF------------- 517
                + G Q+H   +KY    +  + + L+  Y  CG M D   +F             
Sbjct: 133 KTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMI 192

Query: 518 ---------------------------ARM----SERRDEVSWNSMISGYIHNELLPKAM 546
                                      ARM      +R  VSWN+MISGY  N     A+
Sbjct: 193 DRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAV 252

Query: 547 NLVWFMMQRGQ--RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
             V+  M++G+  R ++ T  +VL A + + +LE G  +H     + +  D V+GSAL+D
Sbjct: 253 E-VFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 311

Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
           MYSKCG I+ A   F+ +P  NV +W++MI+G+A HG    A+  F +M+  G  P  V 
Sbjct: 312 MYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 371

Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
           ++ +L+ACSHAGLV+EG ++F  M  V GL P++E + CMVDLLGR G LD+ EEFI  M
Sbjct: 372 YINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNM 431

Query: 725 PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
           PI P+ +IW+ +LGA CR + R  E+G++ AN+L +M P ++  YV L+NMYAS G W +
Sbjct: 432 PIKPDDVIWKALLGA-CRMH-RNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSE 489

Query: 785 VAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGY 844
           V++ R  MKE +++K+ GCSW+ +   +H F+  D+SHP    I   L E++ K+R AGY
Sbjct: 490 VSEMRLRMKEMDIRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINSMLVEISDKLRLAGY 549

Query: 845 VPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKF 903
            P T   L +LE E KE+ + YHSEK+A AF L   S   PIRI+KNLR+C DCHS+ K 
Sbjct: 550 RPITTQVLLNLEEEDKENALHYHSEKMATAFGLISTSPGKPIRIVKNLRICEDCHSSIKL 609

Query: 904 ISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           ISK+  R+I +RD  RFHHF DG CSC DYW
Sbjct: 610 ISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 640



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 218/436 (50%), Gaps = 36/436 (8%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSC---LESTDCARRIFEEIETRDLISWNSIISVY 165
           Q+H + +KS Q  D L +  ++    +        D A +IF ++  R+  SWN+II  +
Sbjct: 34  QIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 93

Query: 166 SQRGD--TISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAM 221
           S+  +   +    LF  M  + F   ++PN +TF S++ A   +  +  G    +QI  +
Sbjct: 94  SESDEDKALIAITLFCEMMSDEF---IEPNRFTFPSVLKACAKTGKIQQG----KQIHGL 146

Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIF-EQMIQKNVVSMNGLMEGRRKGKEVHG 280
             K G   D +V S LV  +   G    A  +F + +I++ +V    +M  RRK      
Sbjct: 147 ALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMV----MMIDRRK------ 196

Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
              R G    V + N +++ Y + G    +R +F  M  +  VSWNTMISG  QNG +++
Sbjct: 197 ---RDG---EVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKD 250

Query: 341 AIMNFCAMRRDGLMSSNF-SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALL 399
           A+  F  M++   +  N+ +L+S L + + LG + LG+ +H      G+  D  + +AL+
Sbjct: 251 AVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALI 310

Query: 400 SLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNG 459
            +Y+  G + + + VF  +P  + ++W+++I  FA       +A+  +  MR+AG  P+ 
Sbjct: 311 DMYSKCGIIEKAIMVFERLPRENVITWSAMINGFA-IHGQAGDAIDCFCKMRQAGVRPSD 369

Query: 460 VTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIF 517
           V +IN+L A S   + + G +  +Q++  +   E  IE+   ++   G+ G +D+ E+  
Sbjct: 370 VAYINLLTACSHAGLVEEGRRYFSQMVSVD-GLEPRIEHYGCMVDLLGRLGLLDEAEEFI 428

Query: 518 ARMSERRDEVSWNSMI 533
             M  + D+V W +++
Sbjct: 429 LNMPIKPDDVIWKALL 444



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 130/287 (45%), Gaps = 60/287 (20%)

Query: 35  DLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE--ACKMFKEMVRAGFL-LNRYALGS 91
           DL  A K+F++MP RN  SW  I+ G++         A  +F EM+   F+  NR+   S
Sbjct: 67  DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPS 126

Query: 92  VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC--------------- 136
           VL+AC + G    + G Q+H L LK     D  V + L+ MY  C               
Sbjct: 127 VLKACAKTGK--IQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNII 184

Query: 137 ---------------------------LESTDC--ARRIFEEIETRDLISWNSIISVYSQ 167
                                      +   DC  AR +F+++  R ++SWN++IS YSQ
Sbjct: 185 EREMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQ 244

Query: 168 RG---DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
            G   D + VF+   + +       ++PN  T  S++ A   S L    L + +    + 
Sbjct: 245 NGFFKDAVEVFREMKKGE------DIRPNYVTLVSVLPAV--SRLGSLELGEWLHLYAED 296

Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           +G+  D  +GSAL+  +++ G    A  +FE++ ++NV++ + ++ G
Sbjct: 297 SGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRENVITWSAMING 343



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 152/331 (45%), Gaps = 20/331 (6%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +V L N +I+ Y+R+GD  +A  LFD+M  R+ VSW  ++SGY+  G   +A ++F+EM 
Sbjct: 200 EVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMK 259

Query: 79  RAGFLLNRY-ALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
           +   +   Y  L SVL A    G    + G  +H     S    D ++ + LI MY  C 
Sbjct: 260 KGEDIRPNYVTLVSVLPAVSRLG--SLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKC- 316

Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
              + A  +FE +   ++I+W+++I+ ++  G        F +M++ G R    P++  +
Sbjct: 317 GIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR----PSDVAY 372

Query: 198 GSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK-IF 254
            +L+TA   +  V  G     Q   MV   GL   +     +V    RLG    A + I 
Sbjct: 373 INLLTACSHAGLVEEGRRYFSQ---MVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFIL 429

Query: 255 EQMIQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAKCGTIDD 309
              I+ + V    L+   R  + V  G  + + L DMV   +G    L NMYA  G   +
Sbjct: 430 NMPIKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSE 489

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
             S  R  + +  +  +   S +D +G   E
Sbjct: 490 V-SEMRLRMKEMDIRKDPGCSWIDIDGVLHE 519



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 48/94 (51%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            HL     G   D  L + LI++Y + G +  A  +F+ +P  N ++W+ +++G+   G 
Sbjct: 290 LHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQ 349

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           + +A   F +M +AG   +  A  ++L AC   G
Sbjct: 350 AGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAG 383


>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like [Glycine max]
          Length = 616

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 233/611 (38%), Positives = 339/611 (55%), Gaps = 44/611 (7%)

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA--DAGYLSRCLKVFFLM 418
           IS L+SC +L  +   +QIH + +  G+ ++       ++  A  +   L    K+    
Sbjct: 13  ISLLNSCTTLKEM---KQIHAQLVVKGILNNPHFHGQFVATIALHNTTNLDYANKLLNHN 69

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG---WSPNGVTFINILAAASSFSMG 475
                 + NS+I A++ S +  S++  +Y ++  +     SP+  TF  ++   +     
Sbjct: 70  NNPTLFTLNSMIRAYSKS-STPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAH 128

Query: 476 KLGHQVHAQVIKYN-------------------------------VANETTIENALLSCY 504
             G  VH  VIK+                                V  +   + A+L+  
Sbjct: 129 VTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNAC 188

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            KCG++D   K+F  M ER D V+WN+MI+GY       +A+++   M   G +L+  + 
Sbjct: 189 AKCGDIDFARKMFDEMPER-DHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSM 247

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
             VLSAC  +  L+ G  VHA   R  +   V +G+ALVDMY+KCG +D A + F  M  
Sbjct: 248 VLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKE 307

Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           RNVY+W+S I G A +G G+++L LF+ MK +G  P+ +TF+ VL  CS  GLV+EG KH
Sbjct: 308 RNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKH 367

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           F SM  VYG+ PQLE +  MVD+ GRAG L +   FIN MP+ P+   W  +L AC    
Sbjct: 368 FDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHAC--RM 425

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
            +  ELG  A   + E+E +N   YVLL+N+YA    WE V+  R+ MK   VKK  GCS
Sbjct: 426 YKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGCS 485

Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLV 864
            + +   VH F+ GD+SHP  D I  KL+E+++ +R +GYV  T   LFD+E E KED +
Sbjct: 486 VIEVDGEVHEFIVGDKSHPRYDEIEMKLEEISKCLRLSGYVANTNPVLFDIEEEEKEDAL 545

Query: 865 SYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
           S HSEK+A+AF +++    +PIR++ NLR+C DCH+  K ISKI  REI++RD NRFHHF
Sbjct: 546 SKHSEKVAIAFGLISLKGVVPIRVVMNLRICWDCHNVAKMISKIFNREIIVRDRNRFHHF 605

Query: 924 NDGKCSCGDYW 934
            DG+CSC DYW
Sbjct: 606 KDGECSCKDYW 616



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 199/449 (44%), Gaps = 48/449 (10%)

Query: 91  SVLRACQECGPSGFKFGMQVHC-LVLK---SNQTFDGLVSNVLIAMYGSCLESTDCARRI 146
           S+L +C     +  K   Q+H  LV+K   +N  F G      IA++ +   + D A ++
Sbjct: 14  SLLNSC-----TTLKEMKQIHAQLVVKGILNNPHFHGQFV-ATIALHNTT--NLDYANKL 65

Query: 147 FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS 206
                   L + NS+I  YS+       F  ++ +       +L P+ YTF  L+     
Sbjct: 66  LNHNNNPTLFTLNSMIRAYSKSSTPSKSFHFYANILHSN-NNNLSPDNYTFTFLVRTC-- 122

Query: 207 SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN 266
           + L        +   V K G   D +V + LV  +A LG       +F+  ++ ++V+  
Sbjct: 123 AQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQT 182

Query: 267 GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
            ++                             N  AKCG ID +R +F  M  +D V+WN
Sbjct: 183 AML-----------------------------NACAKCGDIDFARKMFDEMPERDHVTWN 213

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            MI+G  Q G   EA+  F  M+ +G+  +  S++  LS+C  L  +  G+ +H    + 
Sbjct: 214 AMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERY 273

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
            +   V++  AL+ +YA  G + R ++VF+ M E +  +W+S IG  A       E++  
Sbjct: 274 KVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLA-MNGFGEESLDL 332

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTIENALLSCY 504
           + DM+R G  PNG+TFI++L   S   + + G + H   ++  Y +  +      ++  Y
Sbjct: 333 FNDMKREGVQPNGITFISVLKGCSVVGLVEEGRK-HFDSMRNVYGIGPQLEHYGLMVDMY 391

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           G+ G + +       M  R    +W++++
Sbjct: 392 GRAGRLKEALNFINSMPMRPHVGAWSALL 420



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 7/183 (3%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           D+     ++N   + GD+  A K+FDEMP+R+ V+W  +++GY   G S EA  +F  M 
Sbjct: 177 DLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQ 236

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
             G  LN  ++  VL AC          G  VH  V +        +   L+ MY  C  
Sbjct: 237 MEGVKLNEVSMVLVLSACTHL--QVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKC-G 293

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
           + D A ++F  ++ R++ +W+S I   +  G       LF+ M+REG    ++PN  TF 
Sbjct: 294 NVDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREG----VQPNGITFI 349

Query: 199 SLI 201
           S++
Sbjct: 350 SVL 352



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 11/104 (10%)

Query: 8   HLQILKHG---FAY--------DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWAC 56
           HLQ+L HG    AY         V L   L+++Y + G++  A ++F  M +RN  +W+ 
Sbjct: 256 HLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSS 315

Query: 57  IVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            + G    G   E+  +F +M R G   N     SVL+ C   G
Sbjct: 316 AIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVG 359


>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 642

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 221/600 (36%), Positives = 326/600 (54%), Gaps = 75/600 (12%)

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           L  + LG Q+H   L  GL     V + +++ YA +G +   + VF            + 
Sbjct: 83  LNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVF------------NG 130

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN 489
           IG +                           TF  +L ++       +G  VH  +++  
Sbjct: 131 IGDY--------------------------FTFPFVLKSSVELLSVWMGKCVHGLILRIG 164

Query: 490 VANETTIENALLSCYGKCGEMDDCEKIFARMSER-------------------------- 523
           +  +  +  +L+  YGKCGE++D  K+F  M+ R                          
Sbjct: 165 LQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFE 224

Query: 524 ----RDEVSWNSMISGYIHNELLPKAMNLVWFMMQR--GQRLDHFTFATVLSACASVATL 577
               R+ VSW +MISGY  + L  +A++L   M++   G R +  T  +VL ACA ++TL
Sbjct: 225 RMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTL 284

Query: 578 ERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP--VRNVYSWNSMIS 635
           ERG ++H    R  L  +  +  AL  MY+KCG +  A   FD +    +N+ +WN+MI+
Sbjct: 285 ERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMIT 344

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
            YA +GHG +A++ F +M   G  PD +TF G+LS CSH+GLVD G K+F  MS  Y + 
Sbjct: 345 AYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSIN 404

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
           P++E ++C+ DLLGRAG L +  + + +MP+     IW ++L AC +   R  E+   AA
Sbjct: 405 PRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKH--RNLEMAETAA 462

Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
             LF +EP+N  NYVLL+NMYA  G+W++V K R  +K    KK  GCSW+ +    H+F
Sbjct: 463 RKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMF 522

Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
           + GD SHP+   IY  L+ L +KM+ AGY P T + L D+  E KE  +  HSEK+AVAF
Sbjct: 523 LGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAF 582

Query: 876 -VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            +L   ++  +R+ KNLR+CGDCH+A  FIS+I GRE+++RD NRFHHF  G CSCGDYW
Sbjct: 583 GILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 642



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 166/371 (44%), Gaps = 59/371 (15%)

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE--------QMIQKNVVSM 265
           L  Q+ A +   GL     VGS +V+ +A  G+   +  +F           + K+ V +
Sbjct: 88  LGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGDYFTFPFVLKSSVEL 147

Query: 266 NGLMEGRRKGKEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS-- 322
             +      GK VHG ++R GL FD+  V   L+ +Y KCG I+D+  VF  M  +D   
Sbjct: 148 LSVW----MGKCVHGLILRIGLQFDLY-VATSLIILYGKCGEINDAGKVFDNMTIRDVSS 202

Query: 323 -----------------------------VSWNTMISGLDQNGCYEEAIMNFCAMRRD-- 351
                                        VSW TMISG  Q+G  ++A+  F  M ++  
Sbjct: 203 WNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDS 262

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G+  +  +++S L +CA L  +  G+QIH    ++GL+S+ SV  AL ++YA  G L   
Sbjct: 263 GVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDA 322

Query: 412 LKVFFLM--PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAA 469
              F  +   E + ++WN++I A+A S     +AV  + +M +AG  P+ +TF  +L+  
Sbjct: 323 RNCFDKLNRNEKNLIAWNTMITAYA-SYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGC 381

Query: 470 SSFSMGKLG-----HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           S   +  +G     H      I   V +   + + L    G+ G + +  K+   M    
Sbjct: 382 SHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLL----GRAGRLAEASKLVGEMPMPA 437

Query: 525 DEVSWNSMISG 535
               W S+++ 
Sbjct: 438 GPSIWGSLLAA 448



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 42/241 (17%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFD------------------- 44
            K  H  IL+ G  +D+++  +LI +Y + G++  A K+FD                   
Sbjct: 153 GKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTK 212

Query: 45  ------------EMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR--AGFLLNRYALG 90
                        MP RN VSW  ++SGY+  G++ +A  +F EMV+  +G   N   + 
Sbjct: 213 SGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIM 272

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           SVL AC +   S  + G Q+H L  +     +  V   L AMY  C    D AR  F+++
Sbjct: 273 SVLPACAQL--STLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVD-ARNCFDKL 329

Query: 151 --ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
               ++LI+WN++I+ Y+  G  +     F  M + G    ++P++ TF  L++    S 
Sbjct: 330 NRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAG----IQPDDITFTGLLSGCSHSG 385

Query: 209 L 209
           L
Sbjct: 386 L 386



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/342 (23%), Positives = 146/342 (42%), Gaps = 62/342 (18%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G  VH L+L+    FD  V+  LI +YG C E  D A ++F+ +  RD+ SWN++++ Y+
Sbjct: 153 GKCVHGLILRIGLQFDLYVATSLIILYGKCGEIND-AGKVFDNMTIRDVSSWNALLAGYT 211

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
           + G   +   +F RM                       + +++S                
Sbjct: 212 KSGCIDAALAIFERM----------------------PWRNIVS---------------- 233

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN------------VVSMNGLMEGRRK 274
                   + ++SG+++ G    A  +F++M++++            V+     +    +
Sbjct: 234 -------WTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLER 286

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM--IGKDSVSWNTMISGL 332
           G+++H    R GL    +V   L  MYAKCG++ D+R+ F  +    K+ ++WNTMI+  
Sbjct: 287 GRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAY 346

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE-GLKLGLDSD 391
              G   +A+  F  M + G+   + +    LS C+  G + +G +          ++  
Sbjct: 347 ASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPR 406

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
           V     +  L   AG L+   K+   MP     S W S++ A
Sbjct: 407 VEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAA 448


>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
 gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
          Length = 627

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 219/564 (38%), Positives = 326/564 (57%), Gaps = 8/564 (1%)

Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
           ++ GQQIH   +K GL     V + L++ Y+         +VF         +W+SVI +
Sbjct: 70  LLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISS 129

Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVAN 492
           FA +E  V  A++Y+  M      P+   F +   A +      +G  VH  VIK     
Sbjct: 130 FAQNEEPVL-AIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDV 188

Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFM 552
           +  + ++L+  Y KCG++ +   +F  M  R + VSW+ MI GY       +AM L    
Sbjct: 189 DVFVGSSLVDMYAKCGDIKEARNVFDEMPHR-NVVSWSGMIYGYTQLGEHEEAMRLFKEA 247

Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRI 612
           +  G  ++ FT ++V+  C S   LE G ++H    +   +    +GS+L+ +YSKCG I
Sbjct: 248 LLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLI 307

Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
           + A R FD +P++N+  WN+M+   A+H H  +A  LF++M+  G  P+ +TF+ VL AC
Sbjct: 308 EGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYAC 367

Query: 673 SHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLI 732
           SHAGLV+EG K+F  M + Y + P  + ++ MVDLLGRAG+L +    I  MP  P   +
Sbjct: 368 SHAGLVEEGKKYFALMKK-YEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESV 426

Query: 733 WRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKA 791
           W   +  C    N   T+L   AA+ +FE+   ++  +V+L+N YA+ G++ED AKARK 
Sbjct: 427 WGAFITGCRIHGN---TDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKM 483

Query: 792 MKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFA 851
           +++  VKKE G SW+   + VH F AGD  H     IY+KL++L ++M  AGYV  T F 
Sbjct: 484 LRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVADTSFV 543

Query: 852 LFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGR 910
           L ++  E K   + YHSE++A+AF +++     PIRIMKNLRVCGDCH+A KFISK+ GR
Sbjct: 544 LREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKFISKLSGR 603

Query: 911 EIVLRDSNRFHHFNDGKCSCGDYW 934
            I++RD+NRFH F DGKCSC DYW
Sbjct: 604 VIIVRDNNRFHRFEDGKCSCADYW 627



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 177/380 (46%), Gaps = 15/380 (3%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           KG+++H ++I+SGL  +  V + L+N Y+K      S  VF     K S +W+++IS   
Sbjct: 72  KGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFA 131

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           QN     AI  FC M  + L   +    S   +CA LG   +G+ +H   +K G D DV 
Sbjct: 132 QNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVF 191

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
           V ++L+ +YA  G +     VF  MP  + VSW+ +I  +        EA++ + +    
Sbjct: 192 VGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQL-GEHEEAMRLFKEALLE 250

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
           G   N  T  +++    S ++ +LG Q+H    K +      + ++L+S Y KCG ++  
Sbjct: 251 GLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGA 310

Query: 514 EKIFARMSERRDEVS------WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
            ++F       DEV       WN+M+     +    +A +L   M   G R +  TF  V
Sbjct: 311 YRVF-------DEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCV 363

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           L AC+    +E G +  A   +  +E      +++VD+  + G++  A      MP    
Sbjct: 364 LYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPT 423

Query: 628 YS-WNSMISGYARHGHGDKA 646
            S W + I+G   HG+ D A
Sbjct: 424 ESVWGAFITGCRIHGNTDLA 443



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 157/311 (50%), Gaps = 11/311 (3%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK----------GKEVHGYLIR 284
           S+++S FA+      A + F +MI +N+   + +     K          GK VH  +I+
Sbjct: 124 SSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIK 183

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
           +G    V VG+ LV+MYAKCG I ++R+VF  M  ++ VSW+ MI G  Q G +EEA+  
Sbjct: 184 TGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRL 243

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F     +GL  ++F+L S +  C S   + LG+QIHG   K   D    V ++L+SLY+ 
Sbjct: 244 FKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSK 303

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
            G +    +VF  +P  +   WN+++ A A   A   EA   +  M  AG  PN +TF+ 
Sbjct: 304 CGLIEGAYRVFDEVPIKNLGMWNAMLIACAQ-HAHTKEAFDLFTKMENAGMRPNFITFLC 362

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           +L A S   + + G +  A + KY +   T    +++   G+ G++ +   +   M    
Sbjct: 363 VLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEP 422

Query: 525 DEVSWNSMISG 535
            E  W + I+G
Sbjct: 423 TESVWGAFITG 433



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 166/337 (49%), Gaps = 16/337 (4%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H  ++K G+  DVF+ ++L+++Y + GD+  A  +FDEMP RN VSW+ ++ GYT 
Sbjct: 174 GKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQ 233

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G   EA ++FKE +  G  +N + L SV+R C     +  + G Q+H L  K++    G
Sbjct: 234 LGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSA--TLLELGKQIHGLCFKTSYDLSG 291

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V + LI++Y  C    + A R+F+E+  ++L  WN+++   +Q   T   F LF++M+ 
Sbjct: 292 FVGSSLISLYSKC-GLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMEN 350

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G R    PN  TF  ++ A   + L      ++  A++KK  +       +++V    R
Sbjct: 351 AGMR----PNFITFLCVLYACSHAGLVEEG--KKYFALMKKYEIEPGTQHYASMVDLLGR 404

Query: 244 LGNFYYARKIFEQMIQKNVVSMNG--LMEGRRKGKEVHGYLIRSGLFDMVAVGNG----L 297
            G    A  + + M  +   S+ G  +   R  G           +F++ AV +G    L
Sbjct: 405 AGKLQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVML 464

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            N YA  G  +D+    R M+    V   T +S +++
Sbjct: 465 SNAYAAAGRYEDAAKA-RKMLRDRGVKKETGLSWIEE 500



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 167/369 (45%), Gaps = 53/369 (14%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G Q+H  ++KS      LV + LI  Y S  +    + ++FEE E +   +W+S+IS ++
Sbjct: 73  GQQIHAHIIKSGLQVIPLVCHYLINFY-SKTQLPLLSSQVFEESERKSSTTWSSVISSFA 131

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
           Q  + +   + F RM  E    +L P+++ F S   A   ++L    + + +  +V K G
Sbjct: 132 QNEEPVLAIQYFCRMIGE----NLCPDDHIFPSATKAC--AILGRCDVGKSVHCLVIKTG 185

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------ 274
              D++VGS+LV  +A+ G+   AR +F++M  +NVVS +G++ G  +            
Sbjct: 186 YDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFK 245

Query: 275 -----------------------------GKEVHGYLIRSGLFDMVA-VGNGLVNMYAKC 304
                                        GK++HG   ++  +D+   VG+ L+++Y+KC
Sbjct: 246 EALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTS-YDLSGFVGSSLISLYSKC 304

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G I+ +  VF  +  K+   WN M+    Q+   +EA   F  M   G+  +  + +  L
Sbjct: 305 GLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVL 364

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +C+  G +  G++      K  ++       +++ L   AG L   L V   MP     
Sbjct: 365 YACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPT- 423

Query: 425 SWNSVIGAF 433
              SV GAF
Sbjct: 424 --ESVWGAF 430



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 129/263 (49%), Gaps = 9/263 (3%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  I+K G      +C+ LIN Y +      +S++F+E   ++S +W+ ++S +     
Sbjct: 76  IHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQNEE 135

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
              A + F  M+      + +   S  +AC   G      G  VHCLV+K+    D  V 
Sbjct: 136 PVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRC--DVGKSVHCLVIKTGYDVDVFVG 193

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L+ MY  C +  + AR +F+E+  R+++SW+ +I  Y+Q G+     +LF     EG 
Sbjct: 194 SSLVDMYAKCGDIKE-ARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEG- 251

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              L  N++T  S+I    S+ L    L +QI  +  K       +VGS+L+S +++ G 
Sbjct: 252 ---LDVNDFTLSSVIRVCGSATL--LELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGL 306

Query: 247 FYYARKIFEQMIQKNVVSMNGLM 269
              A ++F+++  KN+   N ++
Sbjct: 307 IEGAYRVFDEVPIKNLGMWNAML 329



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 1/150 (0%)

Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
           +L +G ++HA  +++ L+   ++   L++ YSK      +S+ F+    ++  +W+S+IS
Sbjct: 69  SLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVIS 128

Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
            +A++     A+  F +M  +   PD   F     AC+  G  D G K    +    G  
Sbjct: 129 SFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVG-KSVHCLVIKTGYD 187

Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
             +   S +VD+  + G++ +     ++MP
Sbjct: 188 VDVFVGSSLVDMYAKCGDIKEARNVFDEMP 217


>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 974

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 264/842 (31%), Positives = 421/842 (50%), Gaps = 91/842 (10%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  + K GF +  F    LI++Y +   L  A  +FD   + ++VSW  +++GY   G  
Sbjct: 165 HCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFP 224

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
            EA K+F  M R G   ++  L +V+ A                                
Sbjct: 225 MEAVKVFDRMQRVGHAPDQITLVTVVNA-------------------------------- 252

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
                Y +     D AR++F +I   ++++WN +IS +++RG        F  +++ G  
Sbjct: 253 -----YVALGRLAD-ARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTG-- 304

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             LK    + GS+++A  S  LS       + A   K GL  ++YVGSALV+ +A+    
Sbjct: 305 --LKATRSSLGSVLSAIAS--LSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKM 360

Query: 248 YYARKIFEQMIQKNVVSMNGLMEG-----------------RRKGKE------------- 277
             A+++F  + ++N+V  N ++ G                 +R G +             
Sbjct: 361 DAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSAC 420

Query: 278 -----------VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
                      +H  +I++     + V N LV+MYAK G + ++R  F  M   D+VSWN
Sbjct: 421 ASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWN 480

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
            +I G  Q    +EA   F  M  +G++    SL S +S+CA++  +  GQQ H   +K+
Sbjct: 481 AIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKV 540

Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
           GLD+     ++L+ +Y   G +     VF+ MP  + VS N++I  +  +   + EA+  
Sbjct: 541 GLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGY--TMGHLEEAIHL 598

Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN-VANETTIENALLSCYG 505
           + +++  G  P  VTF  +L       M  LG Q+H QV+K+  +++   +  +LL  Y 
Sbjct: 599 FQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYM 658

Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
                 D E +F+ +   +  V W ++ISGY       KA+     M       D   FA
Sbjct: 659 NSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFA 718

Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
           +VL ACA +++L+ G E+H+         D V  S+L+DMY+KCG +  + + F  MP R
Sbjct: 719 SVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRR 778

Query: 626 N-VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
           N V SWNSMI G A++G+ ++AL +F QM+    +PD VTF+GVLSACSHAG V EG K 
Sbjct: 779 NNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKV 838

Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
           F  M   Y L P+++   CMVD+LGR G L++ EEFINK+    + ++W T+LGA CR +
Sbjct: 839 FDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGA-CRKH 897

Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
             +   G++AA+ L E++PQ++ +YVLL+++YA    W      R+ MK   VKK  G S
Sbjct: 898 GDEVR-GKRAADKLMELKPQSSSSYVLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYS 956

Query: 805 WV 806
           W+
Sbjct: 957 WI 958



 Score =  301 bits (772), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 219/784 (27%), Positives = 365/784 (46%), Gaps = 50/784 (6%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK+ H + LK G      L N ++++YV+ G++  A K F  +  ++  +W  ++S Y  
Sbjct: 60  AKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLD 119

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G+     + F  M       N +    VL AC   G     FG QVHC V K+   F  
Sbjct: 120 HGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACS--GLQDVNFGRQVHCGVFKTGFGFRS 177

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
                LI MY  C    D AR +F+     D +SW ++I+ Y + G  +   K+F RMQR
Sbjct: 178 FCQGGLIDMYAKCRYLRD-ARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQR 236

Query: 184 EGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            G      P++ T  +++ A  A   +     L  QI           ++   + ++SG 
Sbjct: 237 VGH----APDQITLVTVVNAYVALGRLADARKLFTQIPN--------PNVVAWNVMISGH 284

Query: 242 ARLGNFYYARKIFEQMIQK----------NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMV 291
           A+ G    A   F ++ +           +V+S    +     G  VH    + GL D V
Sbjct: 285 AKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNV 344

Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
            VG+ LVNMYAKC  +D ++ VF  +  ++ V WN M+ G  QNG  +E +  F  M+R 
Sbjct: 345 YVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRH 404

Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
           G     F+  S  S+CASL ++  G Q+H   +K    S++ V+NAL+ +YA +G L   
Sbjct: 405 GPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEA 464

Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
            K F LM  HD VSWN++I  +   E    EA   +  M   G  P+ V+  +I++A ++
Sbjct: 465 RKQFELMKIHDNVSWNAIIVGYVQEE-YNDEAFFMFRRMVSNGVLPDEVSLASIVSACAN 523

Query: 472 FSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
               K G Q H  ++K  +   T   ++L+  Y KCG +     +F  M   R+ VS N+
Sbjct: 524 VQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPS-RNVVSVNA 582

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR-A 590
           +I+GY     L +A++L   +   G +    TFA +L  C     L  G ++H   ++  
Sbjct: 583 LIAGYTMGH-LEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWG 641

Query: 591 CLEFDVVIGSALVDMYSKCGR-IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
            L    ++  +L+ +Y    R +D  + F +L   + +  W ++ISGYA+  H +KAL  
Sbjct: 642 FLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQF 701

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQ----LEQFSC-- 703
           +  M+ D  LPD   F  VL AC+       G    ++  +++ LI      +++ +C  
Sbjct: 702 YQHMRSDNILPDQAAFASVLRACA-------GMSSLQNGQEIHSLIFHTGFNMDEVTCSS 754

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP 763
           ++D+  + G++    +   +MP   N + W +++         K     +A  +  +ME 
Sbjct: 755 LIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMI-----VGLAKNGYAEEALEIFKQMEQ 809

Query: 764 QNAV 767
           Q+ +
Sbjct: 810 QSII 813



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 220/470 (46%), Gaps = 39/470 (8%)

Query: 268 LMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
           +++     K +H   ++ G+     +GN +V++Y KCG +D ++  F  +  KD  +WN+
Sbjct: 53  VLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNS 112

Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
           ++S    +G +   + +F  M    +  + F+    LS+C+ L  +  G+Q+H    K G
Sbjct: 113 VLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTG 172

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
                     L+ +YA   YL     VF      D VSW ++I  +   +    EAVK +
Sbjct: 173 FGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYV-RDGFPMEAVKVF 231

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
             M+R G +P+ +T + ++ A                                   Y   
Sbjct: 232 DRMQRVGHAPDQITLVTVVNA-----------------------------------YVAL 256

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
           G + D  K+F ++    + V+WN MISG+       +A++    + + G +    +  +V
Sbjct: 257 GRLADARKLFTQIPN-PNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSV 315

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           LSA AS++ L  G  VHA   +  L+ +V +GSALV+MY+KC ++D A + F+ +  RN+
Sbjct: 316 LSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNI 375

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
             WN+M+ G+A++G   + +  FS MK  GP PD  TF  + SAC+    ++ G +    
Sbjct: 376 VLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTV 435

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
           M +       L   + +VD+  ++G L +  +    M I  N + W  ++
Sbjct: 436 MIK-NKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDN-VSWNAII 483


>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/678 (34%), Positives = 358/678 (52%), Gaps = 40/678 (5%)

Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
           +G  L+ +    G  + +R +F  +   D  + +T+IS L  +G   EAI  + +++  G
Sbjct: 14  LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 73

Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
           +       ++   +CA  G  +  +++H +  + G+ SDV V NAL+  Y     +    
Sbjct: 74  IKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGAR 133

Query: 413 KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
           +VF  +   D VSW S+   +        + +  + +M  +G  PN +T  +IL A +  
Sbjct: 134 RVFDDLVVRDVVSWTSLSSCYVKC-GFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL 192

Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
              K G ++H   +++ +     + +AL+S Y KC  + +   +F  M  R D VSWN +
Sbjct: 193 KDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNGV 251

Query: 533 ISGYIHNELLPKAMNLVWFMMQRGQRLDH------------------------------- 561
           ++ Y  N+   K  +L   M + G R D                                
Sbjct: 252 LTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGF 311

Query: 562 ----FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
                T +++L AC+    L  G E+H    R     D+   +AL+ MY+KCG ++ +  
Sbjct: 312 KPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRN 371

Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGL 677
            FD+M  ++V +WN+MI   A HG+G +AL LF +M L    P+ VTF GVLS CSH+ L
Sbjct: 372 VFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRL 431

Query: 678 VDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
           V+EG + F SM + + + P    +SC+VD+  RAG L++  +FI  MP+ P +  W  +L
Sbjct: 432 VEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALL 491

Query: 738 GACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEV 797
            AC     +  EL + +A  LFE+EP N  NYV L N+  +   W + ++ R  MKE  +
Sbjct: 492 AAC--RVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGI 549

Query: 798 KKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEP 857
            K  GCSW+ + + VH FV GD+S+ E D IY  L EL +KM+ AGY P T + L D++ 
Sbjct: 550 TKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQ 609

Query: 858 ESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRD 916
           E K + +  HSEK+AVAF +L  N +  IR+ KNLR+CGDCH+A K++SK+VG  IV+RD
Sbjct: 610 EEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRD 669

Query: 917 SNRFHHFNDGKCSCGDYW 934
           S RFHHF +G CSC D W
Sbjct: 670 SLRFHHFKNGNCSCKDLW 687



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 240/514 (46%), Gaps = 42/514 (8%)

Query: 26  LINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLN 85
           LI V + VGD   A +LFD +P  +  + + ++S  T  G+SNEA K++  +   G    
Sbjct: 18  LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGI--- 74

Query: 86  RYALGSVLRACQECGPSGFKFGM-QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCAR 144
           +  +   L A + C  SG    + +VH    +     D  V N LI  YG C +  + AR
Sbjct: 75  KPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKC-KCVEGAR 133

Query: 145 RIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA 204
           R+F+++  RD++SW S+ S Y + G       +F  M   G    +KPN  T  S++ A 
Sbjct: 134 RVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSG----VKPNPMTVSSILPAC 189

Query: 205 --YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
                + SG    ++I     + G++ +L+V SALVS +A+  +   AR +F+ M  ++V
Sbjct: 190 AELKDLKSG----KEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDV 245

Query: 263 VSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
           VS NG++    K KE   Y     LF                  +  SR   R     D 
Sbjct: 246 VSWNGVLTAYFKNKE---YEKGFSLF------------------LKMSRDGVR----ADE 280

Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
            +WN +I G  +NG  EEA+  F  M++ G   +  ++ S L +C+    + +G++IH  
Sbjct: 281 ATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCY 340

Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
             +     D++ + ALL +YA  G L+    VF +M   D V+WN++I A A       E
Sbjct: 341 VFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANA-MHGNGKE 399

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALL 501
           A+  +  M  +   PN VTF  +L+  S   + + G Q+   + + + V  +    + ++
Sbjct: 400 ALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVV 459

Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
             Y + G +++  K    M       +W ++++ 
Sbjct: 460 DIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 493



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 136/495 (27%), Positives = 233/495 (47%), Gaps = 65/495 (13%)

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F+R  R+ F    +P+  T  +LI+A  +  LS   +  +I + +++ G+  D+ V  A 
Sbjct: 28  FNR-ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAI--KIYSSLQERGIKPDMPVFLAA 84

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGL 297
               A                    VS + L     + KEVH    R G+   V VGN L
Sbjct: 85  AKACA--------------------VSGDAL-----RVKEVHDDATRCGVMSDVFVGNAL 119

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           ++ Y KC  ++ +R VF  ++ +D VSW ++ S   + G   + +  F  M   G+  + 
Sbjct: 120 IHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNP 179

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
            ++ S L +CA L  +  G++IHG  ++ G+  ++ V +AL+SLYA    +     VF L
Sbjct: 180 MTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDL 239

Query: 418 MPEHDQVSWNSVIGAF-------------------------ADSEALV---------SEA 443
           MP  D VSWN V+ A+                         A   A++          EA
Sbjct: 240 MPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEA 299

Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
           V+ +  M++ G+ PN +T  +IL A S     ++G ++H  V ++    + T   ALL  
Sbjct: 300 VEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYM 359

Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
           Y KCG+++    +F  M  R+D V+WN+MI     +    +A+ L   M+    + +  T
Sbjct: 360 YAKCGDLNLSRNVFDMM-RRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVT 418

Query: 564 FATVLSACASVATLERGMEV-HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
           F  VLS C+    +E G+++ ++ G    +E D    S +VD+YS+ GR++ A +F   M
Sbjct: 419 FTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGM 478

Query: 623 PVRNVYS-WNSMISG 636
           P+    S W ++++ 
Sbjct: 479 PMEPTASAWGALLAA 493



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 117/506 (23%), Positives = 214/506 (42%), Gaps = 105/506 (20%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
           K  H    + G   DVF+ N LI+ Y +   +  A ++FD++  R+ VSW  + S Y   
Sbjct: 98  KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKC 157

Query: 65  GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
           G   +   +F+EM  +G   N   + S+L AC E      K G ++H   ++     +  
Sbjct: 158 GFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL--KDLKSGKEIHGFAVRHGMVVNLF 215

Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
           V + L+++Y  CL   + AR +F+ +  RD++SWN +++ Y +  +    F LF +M R+
Sbjct: 216 VCSALVSLYAKCLSVRE-ARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRD 274

Query: 185 GFR-------------------------------YSLKPNEYTFGSLITA-AYSSVLSGS 212
           G R                                  KPNE T  S++ A ++S  L   
Sbjct: 275 GVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLR-- 332

Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR 272
            + ++I   V +   + DL   +AL+  +A+ G+   +R +F+ M +K+VV+ N +    
Sbjct: 333 -MGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTM---- 387

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
                    +I + +      GNG   ++     + D   + R  +  +SV++  ++SG 
Sbjct: 388 ---------IIANAMH-----GNGKEALF-----LFDKMLLSR--VQPNSVTFTGVLSGC 426

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
             +   EE +  F +M RD L                                  ++ D 
Sbjct: 427 SHSRLVEEGVQIFNSMGRDHL----------------------------------VEPDA 452

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA---FADSE-ALVSEAVKYY 447
           +  + ++ +Y+ AG L+   K    MP E    +W +++ A   + + E A +S    + 
Sbjct: 453 NHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFE 512

Query: 448 LDMRRAGWSPNGVTFINILAAASSFS 473
           ++    G   N V+  NIL  A  +S
Sbjct: 513 IEPNNPG---NYVSLFNILVTAKMWS 535



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 131/307 (42%), Gaps = 51/307 (16%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H   ++HG   ++F+C+ L+++Y +   +  A  +FD MP R+ VSW  +++ Y
Sbjct: 196 KSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAY 255

Query: 62  -----------------------------------THKGMSNEACKMFKEMVRAGFLLNR 86
                                                 G S EA +MF++M + GF  N 
Sbjct: 256 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNE 315

Query: 87  YALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRI 146
             + S+L AC        + G ++HC V +  +  D   +  L+ MY  C +  + +R +
Sbjct: 316 ITISSILPACS--FSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGD-LNLSRNV 372

Query: 147 FEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS 206
           F+ +  +D+++WN++I   +  G+      LF +M        ++PN  TF  +++    
Sbjct: 373 FDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKM----LLSRVQPNSVTFTGVLSGC-- 426

Query: 207 SVLSGSYLLQQILAMVKKAG----LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
              S S L+++ + +    G    +  D    S +V  ++R G    A K  + M  +  
Sbjct: 427 ---SHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPT 483

Query: 263 VSMNGLM 269
            S  G +
Sbjct: 484 ASAWGAL 490


>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
 gi|194705708|gb|ACF86938.1| unknown [Zea mays]
 gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
          Length = 635

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 225/550 (40%), Positives = 317/550 (57%), Gaps = 9/550 (1%)

Query: 390 SDVSVSNALLSLYADAGY-LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
           +DV   N L++    +   L+    +F  MP  D  SW++++ A        +    Y  
Sbjct: 90  TDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRR 149

Query: 449 DMRRAGWS--PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGK 506
            +R  G S   N  T  + LAAA++    + G ++H  V++  +  +  + +AL   Y K
Sbjct: 150 MLREPGGSGADNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAK 209

Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
            G +DD   +F RM  R D VSW +M+  Y       +   L   MM+ G   + FT+A 
Sbjct: 210 FGRLDDARSVFDRMPVR-DVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAG 268

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           VL ACA   + + G +VH    ++        GSALV MYSK G +  A R F  MP  +
Sbjct: 269 VLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPD 328

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
           + SW +MISGYA++G  D+AL  F  +   G  PDHVTFVGVLSAC+HAGLVD+G   F 
Sbjct: 329 LVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFH 388

Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANC 745
           S+   YG+    + ++C++DLL R+G  ++ E+ IN MP+ PN  +W ++LG C    N 
Sbjct: 389 SIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNV 448

Query: 746 RKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSW 805
           R   L   AA  LFE+EP+N   YV LAN+YAS G +++V   R+ M+   + K    SW
Sbjct: 449 R---LAWWAAEALFEIEPENPATYVTLANIYASVGLFDEVENMRRTMELRGITKMPASSW 505

Query: 806 VTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVS 865
           + +   VHVF+ GD+SHP+ + IY  LK+L  KMR+ GYV  T F L D+E E K+  + 
Sbjct: 506 IEVGTRVHVFLVGDKSHPQAEEIYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIG 565

Query: 866 YHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFN 924
           YHSE++AVAF +    K  PI++ KNLR+CGDCH+  K ISKIV REI++RDSNRFHHF 
Sbjct: 566 YHSERLAVAFGIIATPKGSPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFK 625

Query: 925 DGKCSCGDYW 934
           +G CSC DYW
Sbjct: 626 NGSCSCRDYW 635



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 170/378 (44%), Gaps = 30/378 (7%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKN-------------VVSMNGLMEGRRKGK 276
           D +  SA+VS   R G    A  I+ +M+++               ++        R G+
Sbjct: 123 DHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAAATAARCARAGR 182

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           E+H +++R G+     V + L +MYAK G +DD+RSVF  M  +D VSW  M+      G
Sbjct: 183 ELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAG 242

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
              E    F  M R G++ + F+    L +CA      LG+Q+HG   K          +
Sbjct: 243 RDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGS 302

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           AL+ +Y+  G +   ++VF  MP+ D VSW ++I  +A +     EA+  +  +  +G+ 
Sbjct: 303 ALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQN-GQPDEALHCFDMLLSSGFR 361

Query: 457 PNGVTFINILAAASSFSMGKLGHQV-HAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
           P+ VTF+ +L+A +   +   G  + H+   KY + +       ++    + G  +  E 
Sbjct: 362 PDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAED 421

Query: 516 IFARMSERRDEVSWNSMISG-YIHNELLPKAMNLVW------FMMQRGQRLDHFTFATVL 568
           +   M  + ++  W S++ G  IH     K + L W      F ++      + T A + 
Sbjct: 422 MINTMPVKPNKFLWASLLGGCRIH-----KNVRLAWWAAEALFEIEPENPATYVTLANIY 476

Query: 569 SACA---SVATLERGMEV 583
           ++      V  + R ME+
Sbjct: 477 ASVGLFDEVENMRRTMEL 494



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 143/320 (44%), Gaps = 20/320 (6%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +++ G   D  + + L ++Y + G L  A  +FD MP R+ VSW  ++  Y   G 
Sbjct: 184 LHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGR 243

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             E  ++F  M+R+G L N +    VLRAC E   +  K G QVH  + KS         
Sbjct: 244 DGEGFRLFVRMMRSGILPNEFTYAGVLRACAEF--TSEKLGKQVHGRMAKSRTGDSCFAG 301

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L+ MY S       A R+F  +   DL+SW ++IS Y+Q G        F  +   GF
Sbjct: 302 SALVHMY-SKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGF 360

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVK-KAGL--LSDLYVGSALVSGFAR 243
           R    P+  TF  +++A   + L    L   I   +K K G+   +D Y  + ++   +R
Sbjct: 361 R----PDHVTFVGVLSACAHAGLVDKGL--GIFHSIKDKYGIEHTADHY--ACVIDLLSR 412

Query: 244 LGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDM----VAVGNGL 297
            G F  A  +   M ++ N      L+ G R  K V   +     LF++     A    L
Sbjct: 413 SGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPATYVTL 472

Query: 298 VNMYAKCGTIDDSRSVFRFM 317
            N+YA  G  D+  ++ R M
Sbjct: 473 ANIYASVGLFDEVENMRRTM 492



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 157/346 (45%), Gaps = 20/346 (5%)

Query: 9   LQILKHGFAYDVFLCNTLINVYVRVG-DLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           L +L    + DV   NTL+    R    LASA  LFD MP R+  SW+ IVS +   G  
Sbjct: 81  LALLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHVRHGQP 140

Query: 68  NEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
             A  +++ M+R  G         +             + G ++HC V++     D +V 
Sbjct: 141 RAALAIYRRMLREPGGSGADNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVW 200

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L  MY       D AR +F+ +  RD++SW +++  Y   G     F+LF RM R G 
Sbjct: 201 SALADMYAK-FGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSG- 258

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              + PNE+T+  ++ A   +  +   L +Q+   + K+      + GSALV  +++ G+
Sbjct: 259 ---ILPNEFTYAGVLRAC--AEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGD 313

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGR----RKGKEVHGY--LIRSGLFDMVAVGNGLVNM 300
              A ++F  M + ++VS   ++ G     +  + +H +  L+ SG         G+++ 
Sbjct: 314 MGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSA 373

Query: 301 YAKCGTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEA 341
            A  G +D    +F     ++ I   +  +  +I  L ++G +E A
Sbjct: 374 CAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERA 419



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  K  H ++ K       F  + L+++Y + GD+ +A ++F  MP  + VSW  ++SGY
Sbjct: 280 KLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGY 339

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
              G  +EA   F  ++ +GF  +      VL AC   G
Sbjct: 340 AQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAG 378


>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 222/560 (39%), Positives = 337/560 (60%), Gaps = 6/560 (1%)

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G Q+H   LK GL +   VS+ L++LY+        L+VF   P+    +W+SVI AFA 
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           +EA +  A++++  M   G  P+   + +   A        +G  VH   +K     +  
Sbjct: 104 NEAPLL-ALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVF 162

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           + ++L+  Y KCGE+ D   +F  M ER + VSW+ MI GY   +   +A+ L    +  
Sbjct: 163 VGSSLVDMYAKCGEIGDARHLFDEMPER-NVVSWSGMIYGYAQLDDGVEALTLFKQALIE 221

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
              ++ FTF++V+  C+S   LE G  +H   ++   +    +GSAL+ +YSKCG I+ A
Sbjct: 222 DVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGA 281

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
            + FD +P RN+  WNSM+   A+H H  +   LF +M   G  P+ ++F+ VL ACSHA
Sbjct: 282 YQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHA 341

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           GLV++G ++F S+ + YG+ P+ E ++ +VDLLGRAG+L +    I +MP+ P   +W  
Sbjct: 342 GLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGA 400

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           +L   CR + + TE+    A+ + EM+  ++  +VLL+N YA+ G++E+ A+ RK +++ 
Sbjct: 401 LLTG-CRIH-KDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDR 458

Query: 796 EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
            VKKE G SWV   + VH F AGD SH +   IYEKL+EL ++M  AGYV  T F L  +
Sbjct: 459 GVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAV 518

Query: 856 EPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
           + E K + + YHSE++A+AF ++T     PIR+MKNLRVCGDCH+A KF+SK  GR +++
Sbjct: 519 DGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIV 578

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RD+NRFH F DGKCSCGDYW
Sbjct: 579 RDNNRFHRFEDGKCSCGDYW 598



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 179/375 (47%), Gaps = 3/375 (0%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R+G ++H ++++ GL  +  V + L+N+Y+K      S  VF     K S +W+++IS  
Sbjct: 42  RQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAF 101

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            QN     A+  F  M  DG+   +    S   +C  L    +G+ +H   +K G   DV
Sbjct: 102 AQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDV 161

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V ++L+ +YA  G +     +F  MPE + VSW+ +I  +A  +  V EA+  +     
Sbjct: 162 FVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGV-EALTLFKQALI 220

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
                N  TF +++   SS +  +LG  +H   +K +  + + + +AL+S Y KCG ++ 
Sbjct: 221 EDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEG 280

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
             ++F  +  R   + WNSM+     +    +   L   M   G + +  +F +VL AC+
Sbjct: 281 AYQVFDEIPTRNLGL-WNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACS 339

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WN 631
               +E+G E  +      +E +    ++LVD+  + G++  A      MP+R   S W 
Sbjct: 340 HAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWG 399

Query: 632 SMISGYARHGHGDKA 646
           ++++G   H   + A
Sbjct: 400 ALLTGCRIHKDTEMA 414



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 158/317 (49%), Gaps = 12/317 (3%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMN----------GLMEGRRKGKEVHGYLIR 284
           S+++S FA+      A + F +M+   V   +          G +     GK VH   ++
Sbjct: 95  SSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVK 154

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
           +G +  V VG+ LV+MYAKCG I D+R +F  M  ++ VSW+ MI G  Q     EA+  
Sbjct: 155 TGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTL 214

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F     + +  ++F+  S +  C+S  ++ LG+ IHG  LK+  DS   V +AL+SLY+ 
Sbjct: 215 FKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSK 274

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
            G +    +VF  +P  +   WNS++ A A   A        + +M   G  PN ++F++
Sbjct: 275 CGVIEGAYQVFDEIPTRNLGLWNSMLIACAQ-HAHTQRVFGLFEEMGNVGMKPNFISFLS 333

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           +L A S   + + G +  + +  Y +  ET    +L+   G+ G++ +   +  +M  R 
Sbjct: 334 VLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRP 393

Query: 525 DEVSWNSMISG-YIHNE 540
            E  W ++++G  IH +
Sbjct: 394 TESVWGALLTGCRIHKD 410



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 15/285 (5%)

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           N+L + +     + G Q+HA ++K+ +     + + L++ Y K        ++F   + +
Sbjct: 30  NLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDE-TPK 88

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
           +   +W+S+IS +  NE    A+     M+  G R D   + +   AC  +   + G  V
Sbjct: 89  KSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSV 148

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           H   V+     DV +GS+LVDMY+KCG I  A   FD MP RNV SW+ MI GYA+   G
Sbjct: 149 HCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDG 208

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL----E 699
            +ALTLF Q  ++    +  TF  V+  CS +  ++ G         ++GL  ++     
Sbjct: 209 VEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELG-------KLIHGLCLKMSFDSS 261

Query: 700 QF--SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
            F  S ++ L  + G ++   +  +++P T N  +W ++L AC +
Sbjct: 262 SFVGSALISLYSKCGVIEGAYQVFDEIP-TRNLGLWNSMLIACAQ 305



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 165/337 (48%), Gaps = 16/337 (4%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H   +K G+  DVF+ ++L+++Y + G++  A  LFDEMP+RN VSW+ ++ GY  
Sbjct: 145 GKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQ 204

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                EA  +FK+ +     +N +   SV+R C     +  + G  +H L LK +     
Sbjct: 205 LDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCS--SSTFLELGKLIHGLCLKMSFDSSS 262

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V + LI++Y  C    + A ++F+EI TR+L  WNS++   +Q   T  VF LF  M  
Sbjct: 263 FVGSALISLYSKC-GVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGN 321

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G    +KPN  +F S++ A   + L      ++  ++++  G+  +    ++LV    R
Sbjct: 322 VG----MKPNFISFLSVLYACSHAGLVEKG--REYFSLMRDYGIEPETEHYASLVDLLGR 375

Query: 244 LGNFYYARKIFEQMIQKNVVSMNG-LMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----L 297
            G    A  + +QM  +   S+ G L+ G R  K+      +   + +M +  +G    L
Sbjct: 376 AGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLL 435

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            N YA  G  +++ +  R M+    V   T +S +++
Sbjct: 436 SNAYAAAGRYEEA-ARMRKMLRDRGVKKETGLSWVEE 471



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 166/354 (46%), Gaps = 35/354 (9%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  ILK G      + + LIN+Y +      + ++FDE P ++S +W+ ++S +     
Sbjct: 47  LHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEA 106

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGF----KFGMQVHCLVLKSNQTFD 122
              A + F+ M+  G   + +   S  +AC      GF      G  VHCL +K+    D
Sbjct: 107 PLLALQFFRRMLNDGVRPDDHIYPSATKAC------GFLRRSDVGKSVHCLAVKTGYYCD 160

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V + L+ MY  C E  D AR +F+E+  R+++SW+ +I  Y+Q  D +    LF    
Sbjct: 161 VFVGSSLVDMYAKCGEIGD-ARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLF---- 215

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           ++     +  N++TF S+I    SS      L + I  +  K    S  +VGSAL+S ++
Sbjct: 216 KQALIEDVDVNDFTFSSVIRVCSSSTFLE--LGKLIHGLCLKMSFDSSSFVGSALISLYS 273

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS-GLF-DMVAVG------ 294
           + G    A ++F+++  +N+   N ++    +    H +  R  GLF +M  VG      
Sbjct: 274 KCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQ----HAHTQRVFGLFEEMGNVGMKPNFI 329

Query: 295 NGLVNMYA--KCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAI 342
           + L  +YA    G ++  R  F  M    I  ++  + +++  L + G  +EA+
Sbjct: 330 SFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAV 383



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 162/366 (44%), Gaps = 49/366 (13%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G+Q+H  +LK       LVS+ LI +Y S  +    + ++F+E   +   +W+S+IS ++
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLY-SKTQLPLFSLQVFDETPKKSSTTWSSVISAFA 102

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
           Q    +   + F RM  +G R    P+++ + S   A     L  S + + +  +  K G
Sbjct: 103 QNEAPLLALQFFRRMLNDGVR----PDDHIYPSATKAC--GFLRRSDVGKSVHCLAVKTG 156

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------ 274
              D++VGS+LV  +A+ G    AR +F++M ++NVVS +G++ G  +            
Sbjct: 157 YYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFK 216

Query: 275 -----------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
                                        GK +HG  ++        VG+ L+++Y+KCG
Sbjct: 217 QALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCG 276

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            I+ +  VF  +  ++   WN+M+    Q+   +     F  M   G+  +  S +S L 
Sbjct: 277 VIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLY 336

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           +C+  G +  G++        G++ +     +L+ L   AG L   + V   MP     S
Sbjct: 337 ACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTES 396

Query: 426 -WNSVI 430
            W +++
Sbjct: 397 VWGALL 402


>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Glycine max]
          Length = 640

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 246/677 (36%), Positives = 365/677 (53%), Gaps = 67/677 (9%)

Query: 273 RKGKEVHGYLIRSGLF-DMVAVGNGLVNMYAKCG-TIDDSRS----VFRFMIGKDSVSWN 326
           +  K++H  + ++GL  D +  G  L++    C  TI D+      +F      D+   N
Sbjct: 16  KPTKQIHAQICKTGLHTDPLVFGKLLLH----CAITISDALHYALRLFHHFPNPDTFMHN 71

Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLK 385
           T+I  L  +     ++  F  +RR   +S + F+    L + A+   +  G Q+H +  +
Sbjct: 72  TLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLHSQAFR 131

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
            G D+ + V   L+S+YA+ G      +VF  M E + V+WN+                 
Sbjct: 132 HGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNA----------------- 174

Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKL-GHQVHAQVIKYNVANETTIENALLSCY 504
                              +L AA  F  G + G Q    V         T  N +L+ Y
Sbjct: 175 -------------------VLTAA--FRCGDVEGAQ---DVFGCMPVRNLTSWNGMLAGY 210

Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
            K GE+    ++F  M   RDEVSW++MI G+ HN    +A      +++   R +  + 
Sbjct: 211 AKAGELGLARRVFYEMP-LRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSL 269

Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
             VLSACA     E G  +H    +A   +   + +AL+D YSKCG +  A   F  MPV
Sbjct: 270 TGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPV 329

Query: 625 -RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
            R++ SW S+I+G A HG G++A+ LF +M+  G  PD +TF+ +L ACSH+GLV+EG  
Sbjct: 330 ARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCG 389

Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACC-R 742
            F  M  +YG+ P +E + CMVDL GRA  L K  EFI +MP++PN++IWRT+LGAC   
Sbjct: 390 LFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIH 449

Query: 743 ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
            N    EL +     L EM+P N+ ++VLL+N+YA  GKW+DV+  R+ M E  +KK  G
Sbjct: 450 GNIEMAELVKA---RLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPG 506

Query: 803 CSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR-DAGYVPQTKFALFDLEPESKE 861
            S + +   ++ FVAG++ +   +  +EKL+E+  ++R +AGY PQ +  L D+E E KE
Sbjct: 507 WSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREIMLRLRTEAGYAPQLRSVLHDIEEEEKE 566

Query: 862 DLVSYHSEKIAVAFVLTRNSKLP----IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDS 917
           D VS HSEK+A AF +   +KLP    +RI+KNLRVCGDCH+  K ISK+   EI++RD 
Sbjct: 567 DSVSKHSEKLAAAFGI---AKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVEIIVRDR 623

Query: 918 NRFHHFNDGKCSCGDYW 934
           +RFH F DG CSC DYW
Sbjct: 624 SRFHSFKDGFCSCRDYW 640



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 235/508 (46%), Gaps = 27/508 (5%)

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV-SNVLIAMYGSCLESTDCARRIFEE 149
           S+L  C    P+      Q+H  + K+    D LV   +L+    +  ++   A R+F  
Sbjct: 7   SLLSKCSSLKPT-----KQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFHH 61

Query: 150 IETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS-- 207
               D    N++I   S     +S    F +++R+    +L P+ +TF   + A  +S  
Sbjct: 62  FPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQP---TLSPDSFTFAFALKAVANSRH 118

Query: 208 VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG 267
           +  G  L  Q      + G  + ++VG+ L+S +A  G+   AR++F++M + NVV+ N 
Sbjct: 119 LRPGIQLHSQAF----RHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNA 174

Query: 268 LMEGRRKGKEVHGYLIRSGLFDM--VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
           ++    +  +V G     G   +  +   NG++  YAK G +  +R VF  M  +D VSW
Sbjct: 175 VLTAAFRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSW 234

Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           +TMI G   NGC++EA   F  + R+ + ++  SL   LS+CA  G    G+ +HG   K
Sbjct: 235 STMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEK 294

Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVSEAV 444
            G     SV+NAL+  Y+  G ++    VF  MP     VSW S+I   A       EA+
Sbjct: 295 AGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLA-MHGCGEEAI 353

Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLS 502
           + + +M  +G  P+G+TFI++L A S   + + G  + ++ +K     E  IE+   ++ 
Sbjct: 354 QLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSK-MKNLYGIEPAIEHYGCMVD 412

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL-LPKAMNLVWFMMQRGQRLD 560
            YG+   +    +    M    + + W +++    IH  + + + +      M      D
Sbjct: 413 LYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGD 472

Query: 561 HFTFATVLSACAS---VATLERGMEVHA 585
           H   + V +       V+++ R M  H+
Sbjct: 473 HVLLSNVYAVAGKWKDVSSIRRTMTEHS 500



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 162/364 (44%), Gaps = 58/364 (15%)

Query: 17  AYDVFLC---------NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           A DVF C         N ++  Y + G+L  A ++F EMP R+ VSW+ ++ G+ H G  
Sbjct: 188 AQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCF 247

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           +EA   F+E++R     N  +L  VL AC + G   F+FG  +H  V K+   + G V+N
Sbjct: 248 DEAFGFFRELLREEIRTNEVSLTGVLSACAQAG--AFEFGKILHGFVEKAGFLYVGSVNN 305

Query: 128 VLIAMYGSCLESTDCARRIFEEIET-RDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
            LI  Y  C  +   AR +F+ +   R ++SW SII+  +  G      +LF  M+  G 
Sbjct: 306 ALIDTYSKC-GNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGV 364

Query: 187 RYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQ------ILAMVKKAGLLSDLYVGSALV 238
           R    P+  TF SL+ A   S  V  G  L  +      I   ++  G + DLY G A  
Sbjct: 365 R----PDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLY-GRA-- 417

Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHG-----YLIRSGLFDMVAV 293
              ARL   Y    I E  +  N +    L+        +HG      L+++ L +M   
Sbjct: 418 ---ARLQKAY--EFICEMPVSPNAIIWRTLL----GACSIHGNIEMAELVKARLAEMDPD 468

Query: 294 GNG----LVNMYAKCGTIDDSRSVFRFMIG---KDSVSWNTM---------ISGLDQNGC 337
            +G    L N+YA  G   D  S+ R M     K +  W+ +         ++G   N  
Sbjct: 469 NSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNEV 528

Query: 338 YEEA 341
            EEA
Sbjct: 529 TEEA 532



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 1/97 (1%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP-DRNSVSWACIVSGYTH 63
           K+ H  + K GF Y   + N LI+ Y + G++A A  +F  MP  R+ VSW  I++G   
Sbjct: 286 KILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAM 345

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
            G   EA ++F EM  +G   +     S+L AC   G
Sbjct: 346 HGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSG 382


>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 233/673 (34%), Positives = 361/673 (53%), Gaps = 75/673 (11%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
           + K+VH ++++ G    V V N L+N ++ C  + D+  VF      DSVSWN++++G  
Sbjct: 96  EAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYI 155

Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
           + G  EEA   +  M    +++SN                                    
Sbjct: 156 EIGNVEEAKHIYHQMPERSIIASN------------------------------------ 179

Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
              +++ L+   G +    K+F  M E D V+W+++I  F  +E +  EA++ ++ M + 
Sbjct: 180 ---SMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNE-MYEEAIRTFVGMHKI 235

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM--- 510
           G   + V  ++ L+A ++  +  +G  +H+  +K    +   ++NAL+  Y KCG++   
Sbjct: 236 GVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVA 295

Query: 511 ----------------------------DDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
                                       D+ + IF  M E+ D VSW+SMISGY  N+L 
Sbjct: 296 RKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEK-DVVSWSSMISGYAQNDLF 354

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
            + + L   M   G + D  T  +V+SACA +A LE+G  VHA   R  L  +V++G+ L
Sbjct: 355 DETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTL 414

Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
           +DMY KCG ++ A   F  M  + + +WN++I G A +G  + +L +FS MK     P+ 
Sbjct: 415 IDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNE 474

Query: 663 VTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFIN 722
           +TF+GVL AC H GLVDEG  HF SM   + + P ++ + CMVDLLGRAG+L + EE +N
Sbjct: 475 ITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLN 534

Query: 723 KMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKW 782
           +MP+TP+   W  +LGAC +     +E+GR+    L E++P +   +VLL+N+YAS GKW
Sbjct: 535 RMPMTPDVATWGALLGACKKHG--DSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKW 592

Query: 783 EDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDA 842
           +DV + R  M +  V K  GCS +     +H F+AGD++HP+ D I + L E+  K++  
Sbjct: 593 DDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLE 652

Query: 843 GYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNS-KLPIRIMKNLRVCGDCHSAF 901
           GY P     L D++ E KE  +  HSEK+A+AF L   S   PIRIMKNLR+C DCH+A 
Sbjct: 653 GYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAA 712

Query: 902 KFISKIVGREIVL 914
           K ISK   R+IV 
Sbjct: 713 KLISKAFCRKIVF 725



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 146/573 (25%), Positives = 264/573 (46%), Gaps = 61/573 (10%)

Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSL 200
           D  RRIF  IE  +   WN +I  Y Q       F L+  M        L  + YT+  L
Sbjct: 29  DYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSM----LSNYLGADNYTYPLL 84

Query: 201 ITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
           I A   S+    +  +Q+   V K G  SD+YV + L++ F+   N   A ++F +    
Sbjct: 85  IQAC--SIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVL 142

Query: 261 NVVSMNGLMEGR------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
           + VS N ++ G        + K ++  +        +   N ++ ++   G + ++  +F
Sbjct: 143 DSVSWNSILAGYIEIGNVEEAKHIYHQMPERS----IIASNSMIVLFGMRGLVVEACKLF 198

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
             M+ KD V+W+ +I+   QN  YEEAI  F  M + G+M      +S LS+CA+L  + 
Sbjct: 199 DEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVN 258

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYAD--------------------------AGYL 408
           +G+ IH   LK+G +S +++ NAL+ +Y+                           +GYL
Sbjct: 259 MGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYL 318

Query: 409 SRCL-----KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
              L      +F  MPE D VSW+S+I  +A ++ L  E +  + +M+ +G+ P+  T +
Sbjct: 319 KCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQND-LFDETLALFQEMQMSGFKPDETTLV 377

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           ++++A +  +  + G  VHA + +  +     +   L+  Y KCG ++   ++F  M E+
Sbjct: 378 SVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEK 437

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME- 582
               +WN++I G   N L+  ++++   M +     +  TF  VL AC  +  ++ G   
Sbjct: 438 GIS-TWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHH 496

Query: 583 ----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGY 637
               +H   ++     +V     +VD+  + G++  A    + MP+  +V +W +++   
Sbjct: 497 FYSMIHDHKIQP----NVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGAC 552

Query: 638 ARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
            +  HGD  +      KL    PDH  F  +LS
Sbjct: 553 KK--HGDSEMGRRVGRKLIELQPDHDGFHVLLS 583



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/532 (23%), Positives = 242/532 (45%), Gaps = 79/532 (14%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           +AK  H  +LK GF  DV++ NTLIN +    ++  A ++F+E    +SVSW  I++GY 
Sbjct: 96  EAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYI 155

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G   EA  ++ +M                                    ++ SN    
Sbjct: 156 EIGNVEEAKHIYHQMPERS--------------------------------IIASNSMI- 182

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
                VL  M G  +E    A ++F+E+  +D+++W+++I+ + Q        + F  M 
Sbjct: 183 -----VLFGMRGLVVE----ACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMH 233

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           + G    +  +E    S ++A  + ++     L   L++  K G  S + + +AL+  ++
Sbjct: 234 KIG----VMVDEVVAVSALSACANLLVVNMGKLIHSLSL--KIGTESYINLQNALIYMYS 287

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
           + G+   ARK+F++    +++S N ++ G                             Y 
Sbjct: 288 KCGDIMVARKLFDEAYLLDLISWNSMISG-----------------------------YL 318

Query: 303 KCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIS 362
           KC  +D+++++F  M  KD VSW++MISG  QN  ++E +  F  M+  G      +L+S
Sbjct: 319 KCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVS 378

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
            +S+CA L  +  G+ +H    + GL  +V +   L+ +Y   G +   L+VF+ M E  
Sbjct: 379 VISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKG 438

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQV 481
             +WN++I   A    LV  ++  + +M++   +PN +TF+ +L A     +   G H  
Sbjct: 439 ISTWNALILGLA-MNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHF 497

Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
           ++ +  + +         ++   G+ G++ + E++  RM    D  +W +++
Sbjct: 498 YSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALL 549



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 118/496 (23%), Positives = 208/496 (41%), Gaps = 78/496 (15%)

Query: 24  NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
           N++I ++   G +  A KLFDEM +++ V+W+ +++ +    M  EA + F  M + G +
Sbjct: 179 NSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVM 238

Query: 84  LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC------- 136
           ++     S L AC          G  +H L LK        + N LI MY  C       
Sbjct: 239 VDEVVAVSALSACANL--LVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVAR 296

Query: 137 -----------------------LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTIS 173
                                      D A+ IF+ +  +D++SW+S+IS Y+Q      
Sbjct: 297 KLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDE 356

Query: 174 VFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYV 233
              LF  MQ  GF    KP+E T  S+I+A   + L+     + + A +K+ GL  ++ +
Sbjct: 357 TLALFQEMQMSGF----KPDETTLVSVISAC--ARLAALEQGKWVHAYIKRNGLTINVIL 410

Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYL-IRSGLFDMVA 292
           G+ L+  + + G    A ++F  MI+K + + N L+ G      V   L + S +     
Sbjct: 411 GTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHV 470

Query: 293 VGN-----GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT-----MISGLDQNGCYEEA- 341
             N     G++      G +D+ +  F  MI    +  N      M+  L + G  +EA 
Sbjct: 471 TPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAE 530

Query: 342 -IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD---VSVSNA 397
            ++N   M  D          + L +C   G   +G+++  + ++L  D D   V +SN 
Sbjct: 531 ELLNRMPMTPDVATWG-----ALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN- 584

Query: 398 LLSLYADAGYLSRCLKVFFLMPEH--------DQVSWNSVIGAF-------ADSEALVSE 442
              +YA  G     L++  +M +H          +  N VI  F        D +A+   
Sbjct: 585 ---IYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDM 641

Query: 443 AVKYYLDMRRAGWSPN 458
            V+  + ++  G++P+
Sbjct: 642 LVEMAMKLKLEGYTPD 657



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 152/339 (44%), Gaps = 19/339 (5%)

Query: 10  QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
           ++    +  D+   N++I+ Y++   + +A  +FD MP+++ VSW+ ++SGY    + +E
Sbjct: 297 KLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDE 356

Query: 70  ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
              +F+EM  +GF  +   L SV+ AC     +  + G  VH  + ++  T + ++   L
Sbjct: 357 TLALFQEMQMSGFKPDETTLVSVISACARL--AALEQGKWVHAYIKRNGLTINVILGTTL 414

Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
           I MY  C    + A  +F  +  + + +WN++I   +  G   S   +FS M+    +  
Sbjct: 415 IDMYMKC-GCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMK----KCH 469

Query: 190 LKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
           + PNE TF  ++ A     L   G +      +M+    +  ++     +V    R G  
Sbjct: 470 VTPNEITFMGVLGACRHMGLVDEGQH---HFYSMIHDHKIQPNVKHYGCMVDLLGRAGKL 526

Query: 248 YYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMY 301
             A ++  +M     V+  G + G  ++ G    G  +   L ++    +G    L N+Y
Sbjct: 527 QEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIY 586

Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
           A  G  DD   + R M+ K  V      S ++ NG   E
Sbjct: 587 ASKGKWDDVLEI-RGMMTKHRVLKIPGCSMIEANGVIHE 624



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 156/362 (43%), Gaps = 41/362 (11%)

Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
            +D   +IF    E  +   WN MI  YI       A  L   M+      D++T+  ++
Sbjct: 27  HIDYTRRIF-NFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLI 85

Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
            AC+   +     +VH   ++   + DV + + L++ +S C  +  A R F+   V +  
Sbjct: 86  QACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSV 145

Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
           SWNS+++GY   G+ ++A  ++ QM    P    +    ++      GLV E  K F  M
Sbjct: 146 SWNSILAGYIEIGNVEEAKHIYHQM----PERSIIASNSMIVLFGMRGLVVEACKLFDEM 201

Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDK-IEEFI--NKMPITPNSLIWRTVLGACCRANC 745
                L   +  +S ++    +    ++ I  F+  +K+ +  + ++  + L AC  AN 
Sbjct: 202 -----LEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSAC--ANL 254

Query: 746 RKTELGRKAANMLFEMEPQNAVNYV-LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
               +G+   ++  ++  ++ +N    L  MY+  G   D+  ARK   EA +      S
Sbjct: 255 LVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCG---DIMVARKLFDEAYLLDLI--S 309

Query: 805 WVTMKDG------VHVFVAGDESHPEKDLI--------------YEKLKELNQKMRDAGY 844
           W +M  G      V    A  +S PEKD++              +++   L Q+M+ +G+
Sbjct: 310 WNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGF 369

Query: 845 VP 846
            P
Sbjct: 370 KP 371



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 13/209 (6%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H  I ++G   +V L  TLI++Y++ G + +A ++F  M ++   +W  ++ G 
Sbjct: 390 EQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGL 449

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG---PSGFKFGMQVHCLVLKSN 118
              G+   +  MF  M +     N      VL AC+  G        F   +H   ++ N
Sbjct: 450 AMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPN 509

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLF 178
               G + + L+   G   E+ +   R+     T D+ +W +++    + GD+    ++ 
Sbjct: 510 VKHYGCMVD-LLGRAGKLQEAEELLNRM---PMTPDVATWGALLGACKKHGDS----EMG 561

Query: 179 SRMQREGFRYSLKPNEYTFGSLITAAYSS 207
            R+ R+     L+P+   F  L++  Y+S
Sbjct: 562 RRVGRKLIE--LQPDHDGFHVLLSNIYAS 588


>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
          Length = 558

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/562 (41%), Positives = 330/562 (58%), Gaps = 14/562 (2%)

Query: 378 QIHGEGLKLGL-DSDVSVSNALLSLYADA-GYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           ++H   LK G  +  +++   LLS  A A   LS    +F L+   D  ++N++I A AD
Sbjct: 6   KLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTIIRAHAD 65

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           S    S ++   + M  AG SP+  TF  +L A +    G     +H+ + K    ++  
Sbjct: 66  SSPSFSLSLFSKMTM--AGVSPDHFTFPFVLKACARLQTGL---DLHSLLFKLGFDSDVY 120

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           ++N L+  YG CG +D   K F  M ER D VSW+SMI+ +  N    +A+ L   M   
Sbjct: 121 VQNGLIHFYGCCGFLDFALKAFEEMPER-DLVSWSSMIACFAKNGFGYEALALFQRMQLV 179

Query: 556 GQ-RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
           G  + D     +V+SA + +  LE G  +     R  LEF V +G+ALVDM+S+CG I+ 
Sbjct: 180 GTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEE 239

Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSH 674
           + R FD M  RNV +W ++I+G A HG   +AL +F +M+  G  PDHVTF GVL ACSH
Sbjct: 240 SMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSH 299

Query: 675 AGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWR 734
            GLV EG+  F+S+   YG+ P  E + CMVDLLGRAG L++  +F++ MPI PNS+IWR
Sbjct: 300 GGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWR 359

Query: 735 TVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKE 794
           T+LGAC   N    EL  K    + E++  +  +YVLL+N+Y   G+W + A  R +M+E
Sbjct: 360 TLLGACVNHN--YIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMRE 417

Query: 795 AEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFD 854
             + K+ GCS + +   +H FVAGD +HP+ + I E L  +   ++  GY P     LFD
Sbjct: 418 KRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGYTPDISNVLFD 477

Query: 855 LEPESKEDLVSYHSEKIAVAFVLT--RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREI 912
           +E E KE  + YHSEK+AVAF L   ++S+  IR+MKNLR+C DCH   K+ S +  REI
Sbjct: 478 IEEEEKESTLGYHSEKLAVAFALLCFKDSR-TIRVMKNLRICHDCHCFMKYASDVFEREI 536

Query: 913 VLRDSNRFHHFNDGKCSCGDYW 934
           ++RD NRFHHF+ G CSC DYW
Sbjct: 537 IIRDRNRFHHFSKGSCSCRDYW 558



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 163/340 (47%), Gaps = 17/340 (5%)

Query: 310 SRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCAS 369
           +RS+F  +   D+ ++NT+I     +     ++  F  M   G+   +F+    L +CA 
Sbjct: 41  ARSIFDLIAFPDTFAFNTIIRA-HADSSPSFSLSLFSKMTMAGVSPDHFTFPFVLKACAR 99

Query: 370 LGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV 429
           L     G  +H    KLG DSDV V N L+  Y   G+L   LK F  MPE D VSW+S+
Sbjct: 100 L---QTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKAFEEMPERDLVSWSSM 156

Query: 430 IGAFADSEALVSEAVKYYLDMRRAGW-SPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
           I  FA +     EA+  +  M+  G   P+ V  +++++A S     +LG  +   + + 
Sbjct: 157 IACFAKN-GFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRN 215

Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNL 548
            +    ++  AL+  + +CG +++  ++F  M E R+ ++W ++I+G   +    +A+ +
Sbjct: 216 GLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGE-RNVLTWTALINGLAVHGRSAEALRM 274

Query: 549 VWFMMQRGQRLDHFTFATVLSACASVATLERGMEV-----HACGVRACLEFDVVIGSALV 603
            + M   G + DH TF  VL AC+    +  G  V     +  G+    E        +V
Sbjct: 275 FYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEH----YGCMV 330

Query: 604 DMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGH 642
           D+  + G ++ A +F D MP+R N   W +++     H +
Sbjct: 331 DLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNY 370



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 140/276 (50%), Gaps = 5/276 (1%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           + G ++H  L + G    V V NGL++ Y  CG +D +   F  M  +D VSW++MI+  
Sbjct: 101 QTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKAFEEMPERDLVSWSSMIACF 160

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLI-STLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
            +NG   EA+  F  M+  G +  +  ++ S +S+ + LG + LG+ I G   + GL+  
Sbjct: 161 AKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFT 220

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
           VS+  AL+ +++  G +   ++VF  M E + ++W ++I   A      +EA++ + +MR
Sbjct: 221 VSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLA-VHGRSAEALRMFYEMR 279

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGE 509
             G+ P+ VTF  +L A S   +   G  V  + I+     E   E+   ++   G+ G 
Sbjct: 280 NHGFQPDHVTFTGVLVACSHGGLVSEGWHVF-ESIRNEYGMEPLPEHYGCMVDLLGRAGL 338

Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
           +++  K    M  R + + W +++   +++  +  A
Sbjct: 339 LNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELA 374



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 12/236 (5%)

Query: 36  LASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRA 95
           L+ A  +FD +   ++ ++  I+  +     S       K M  AG   + +    VL+A
Sbjct: 38  LSYARSIFDLIAFPDTFAFNTIIRAHADSSPSFSLSLFSK-MTMAGVSPDHFTFPFVLKA 96

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDL 155
           C        + G+ +H L+ K     D  V N LI  YG C    D A + FEE+  RDL
Sbjct: 97  CAR-----LQTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCC-GFLDFALKAFEEMPERDL 150

Query: 156 ISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL 215
           +SW+S+I+ +++ G       LF RMQ  G   ++KP+E    S+++A   S+L    L 
Sbjct: 151 VSWSSMIACFAKNGFGYEALALFQRMQLVG---TVKPDEVIVLSVVSAI--SILGDLELG 205

Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
           + I   + + GL   + +G+ALV  F+R G    + ++F++M ++NV++   L+ G
Sbjct: 206 KWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALING 261



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 172/384 (44%), Gaps = 58/384 (15%)

Query: 109 QVHCLVLKSNQTFDGL-VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQ 167
           ++H  +LK+      L +  +L++   S   S   AR IF+ I   D  ++N+II  ++ 
Sbjct: 6   KLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTIIRAHAD 65

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
              + S+    S+M   G    + P+ +TF   +  A + + +G      + +++ K G 
Sbjct: 66  SSPSFSLSLF-SKMTMAG----VSPDHFTF-PFVLKACARLQTG----LDLHSLLFKLGF 115

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------- 274
            SD+YV + L+  +   G   +A K FE+M ++++VS + ++    K             
Sbjct: 116 DSDVYVQNGLIHFYGCCGFLDFALKAFEEMPERDLVSWSSMIACFAKNGFGYEALALFQR 175

Query: 275 -----------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
                                        GK + G++ R+GL   V++G  LV+M+++CG
Sbjct: 176 MQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCG 235

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            I++S  VF  M  ++ ++W  +I+GL  +G   EA+  F  MR  G    + +    L 
Sbjct: 236 CIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLV 295

Query: 366 SCASLGWIMLGQQIHGEGLK--LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHD 422
           +C+  G +  G  +  E ++   G++        ++ L   AG L+   K    MP   +
Sbjct: 296 ACSHGGLVSEGWHVF-ESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPN 354

Query: 423 QVSWNSVIGAFADSEAL-VSEAVK 445
            + W +++GA  +   + ++E VK
Sbjct: 355 SIIWRTLLGACVNHNYIELAEKVK 378



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 109/215 (50%), Gaps = 10/215 (4%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  + K GF  DV++ N LI+ Y   G L  A K F+EMP+R+ VSW+ +++ +   G 
Sbjct: 106 LHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKAFEEMPERDLVSWSSMIACFAKNGF 165

Query: 67  SNEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
             EA  +F+ M   G +  +   + SV+ A    G    + G  +   + ++   F   +
Sbjct: 166 GYEALALFQRMQLVGTVKPDEVIVLSVVSAISILG--DLELGKWIRGFISRNGLEFTVSL 223

Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
              L+ M+  C    + + R+F+E+  R++++W ++I+  +  G +    ++F  M+  G
Sbjct: 224 GTALVDMFSRC-GCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHG 282

Query: 186 FRYSLKPNEYTF-GSLITAAYSSVLS-GSYLLQQI 218
           F    +P+  TF G L+  ++  ++S G ++ + I
Sbjct: 283 F----QPDHVTFTGVLVACSHGGLVSEGWHVFESI 313


>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
 gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
          Length = 741

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/588 (38%), Positives = 346/588 (58%), Gaps = 8/588 (1%)

Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
           V V   L+NMY K G I D+R VF  M  +++VSW  M+SG     C EEA   F  M +
Sbjct: 158 VFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQ 217

Query: 351 DGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
           +  +  N F   + LS+ +    +++G Q+HG  LK GL   VSV N+L+++YA A  + 
Sbjct: 218 ECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMD 277

Query: 410 RCLKVFFLMPEHDQVSWNSVIGAFA-DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
             + VF    E + ++W+++I  +A + EA    A   +L M  AG+SP   TF+ IL A
Sbjct: 278 AAMAVFGSSKERNSITWSAMITGYAQNGEA--DCAATMFLQMHSAGFSPTEFTFVGILNA 335

Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
           +S      +G Q H  ++K     +  +++AL+  Y KCG   D +  F ++ +  D V 
Sbjct: 336 SSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVI 395

Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
           W +MI+G++ N    +A+ L   M + G    + T  +VL ACA +A LE G ++HA  +
Sbjct: 396 WTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQIL 455

Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
           +        +G+AL  MYSKCG ++ +   F  MP R++ SWNS+ISG+++HG G  AL 
Sbjct: 456 KCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALD 515

Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
           LF +MKL+G  PDH+TF+ VL ACSH GLVD G+ +F++MS+ YGLIP+L+ ++C+VD+L
Sbjct: 516 LFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDIL 575

Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
            RAG+L + ++FI  + I   + +WR VLGAC   + R  ++G  A   L E+  +++  
Sbjct: 576 SRAGQLKEAKDFIESITIDHGTCLWRIVLGAC--RSLRDFDVGAYAGEQLMELGTEDSSA 633

Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
           Y+LL+N+YA+  KW DV + R  M+   V K+ GCSWV + + V+VFV G++ HPE + I
Sbjct: 634 YILLSNIYAAQRKWNDVERVRHLMRLRGVSKDPGCSWVELNNQVNVFVVGEQQHPEAEKI 693

Query: 829 YEKLKELNQKMRDAGYVPQTKFALFDLEPES-KEDLVSYHSEKIAVAF 875
             +L  L + M+D GY    KF LFD E ++ +E       E I+ AF
Sbjct: 694 NVELIRLAKHMKDEGYRQTYKF-LFDDELDALRERHEEQQLELISTAF 740



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 149/525 (28%), Positives = 250/525 (47%), Gaps = 56/525 (10%)

Query: 105 KFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST-DCARRIFEEIET--RDLISWNSI 161
           + G  +H   LKS       VSN LI  Y S        A  +F +I    RD+ SWNS+
Sbjct: 31  RAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDVASWNSL 90

Query: 162 ISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQIL 219
           ++  S R   ++    F  M       ++ P  ++F ++ TAA    S  +G+       
Sbjct: 91  LNPLS-RHQPLAALSHFRSMMSS--TDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFAC 147

Query: 220 AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGK--- 276
            +   +G  ++++V +AL++ + +LG    AR++F+QM  +N VS   ++ G   GK   
Sbjct: 148 KLPSSSGS-NNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSE 206

Query: 277 ---------------------------------------EVHGYLIRSGLFDMVAVGNGL 297
                                                  ++HG +++ GL   V+V N L
Sbjct: 207 EAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSL 266

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN 357
           V MYAK   +D + +VF     ++S++W+ MI+G  QNG  + A   F  M   G   + 
Sbjct: 267 VTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTE 326

Query: 358 FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFL 417
           F+ +  L++ + +G +++G+Q HG  +KLG +  V V +AL+ +YA  G        F  
Sbjct: 327 FTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQ 386

Query: 418 MPEHDQVS-WNSVI-GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
           + + D V  W ++I G   + E    EA+  Y  M + G  P+ +T  ++L A +  +  
Sbjct: 387 LYDVDDVVIWTAMITGHVQNGEH--EEALMLYSRMDKEGVMPSYLTVTSVLRACACLAAL 444

Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
           + G Q+HAQ++K       ++  AL + Y KCG ++D   +F RM + RD +SWNS+ISG
Sbjct: 445 EPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPD-RDIISWNSIISG 503

Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
           +  +     A++L   M   G   DH TF  VL AC+ +  ++RG
Sbjct: 504 FSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRG 548



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 200/406 (49%), Gaps = 62/406 (15%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +VF+   L+N+Y ++G ++ A ++FD+MP RN+VSWA +VSGY     S EA ++F+ M+
Sbjct: 157 NVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLML 216

Query: 79  RAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL-----VSNVLIAM 132
           +   L  N +   +VL A     P G   G+Q+H LVLK     DGL     V N L+ M
Sbjct: 217 QECPLEKNEFVATAVLSAVSV--PLGLLIGVQLHGLVLK-----DGLVGFVSVENSLVTM 269

Query: 133 YGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKP 192
           Y    E  D A  +F   + R+ I+W+++I+ Y+Q G+      +F +M   GF     P
Sbjct: 270 YAKA-ECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGF----SP 324

Query: 193 NEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK 252
            E+TF  ++ A  SS +    + +Q   ++ K G    +YV SALV  +A+ G    A+ 
Sbjct: 325 TEFTFVGILNA--SSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKD 382

Query: 253 IFEQMIQ-KNVVSMNGLMEGR--------------------------------------- 272
            F Q+    +VV    ++ G                                        
Sbjct: 383 GFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLA 442

Query: 273 --RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
               GK++H  +++ G     +VG  L  MY+KCG ++DS  VFR M  +D +SWN++IS
Sbjct: 443 ALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIIS 502

Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           G  Q+G   +A+  F  M+ +G+   + + I+ L +C+ +G +  G
Sbjct: 503 GFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRG 548



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 228/476 (47%), Gaps = 19/476 (3%)

Query: 272 RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGT--IDDSRSVFRFMIG--KDSVSWNT 327
           RR G  +HG+ ++SG      V N L+  Y       +  + +VF  +    +D  SWN+
Sbjct: 30  RRAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDVASWNS 89

Query: 328 MISGLDQNGCYEEAIMNFCAM--RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
           +++ L ++     A+ +F +M    D ++ +  S  +  ++ A +     G   H    K
Sbjct: 90  LLNPLSRHQPL-AALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACK 148

Query: 386 LGLDS---DVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
           L   S   +V VS ALL++Y   G +S   +VF  MP  + VSW +++  +A  +     
Sbjct: 149 LPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEA 208

Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
              + L ++      N      +L+A S      +G Q+H  V+K  +    ++EN+L++
Sbjct: 209 FELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVT 268

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
            Y K   MD    +F   S+ R+ ++W++MI+GY  N     A  +   M   G     F
Sbjct: 269 MYAKAECMDAAMAVFGS-SKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEF 327

Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRI-DYASRFFDL 621
           TF  +L+A + +  L  G + H   V+   E  V + SALVDMY+KCG   D    F  L
Sbjct: 328 TFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQL 387

Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
             V +V  W +MI+G+ ++G  ++AL L+S+M  +G +P ++T   VL AC+    ++ G
Sbjct: 388 YDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPG 447

Query: 682 FK-HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP----ITPNSLI 732
            + H + +   +GL   +   + +  +  + G L+       +MP    I+ NS+I
Sbjct: 448 KQLHAQILKCGFGLGGSVG--TALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSII 501



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 130/265 (49%), Gaps = 8/265 (3%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  +LK G    V + N+L+ +Y +   + +A  +F    +RNS++W+ +++GY   G 
Sbjct: 247 LHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGE 306

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
           ++ A  MF +M  AGF    +    +L A  + G      G Q H L++K        V 
Sbjct: 307 ADCAATMFLQMHSAGFSPTEFTFVGILNASSDMG--ALVVGKQAHGLMVKLGFERQVYVK 364

Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
           + L+ MY  C  + D      +  +  D++ W ++I+ + Q G+      L+SRM +EG 
Sbjct: 365 SALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEG- 423

Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
              + P+  T  S++ A   + L+     +Q+ A + K G      VG+AL + +++ GN
Sbjct: 424 ---VMPSYLTVTSVLRAC--ACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGN 478

Query: 247 FYYARKIFEQMIQKNVVSMNGLMEG 271
              +  +F +M  ++++S N ++ G
Sbjct: 479 LEDSMVVFRRMPDRDIISWNSIISG 503



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 99/214 (46%), Gaps = 8/214 (3%)

Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLS--CYGKCGEMDDCEKIFARMSE-RR 524
           AASS    + G  +H   +K   A+ T + N+L++  C      +     +FA +    R
Sbjct: 23  AASSVRTRRAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLR 82

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD-HFTFATVLSACASVATLERGMEV 583
           D  SWNS+++    ++ L    +    M      L    +FA V +A A V +   G   
Sbjct: 83  DVASWNSLLNPLSRHQPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVA 142

Query: 584 HACGVR---ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
           HA   +   +    +V + +AL++MY K G I  A R FD MP RN  SW +M+SGYA  
Sbjct: 143 HAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATG 202

Query: 641 GHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACS 673
              ++A  LF  M  + PL  +      VLSA S
Sbjct: 203 KCSEEAFELFRLMLQECPLEKNEFVATAVLSAVS 236



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 50/99 (50%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           +  K  H QILK GF     +   L  +Y + G+L  +  +F  MPDR+ +SW  I+SG+
Sbjct: 445 EPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGF 504

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
           +  G   +A  +F+EM   G   +     +VL AC   G
Sbjct: 505 SQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMG 543


>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/593 (38%), Positives = 339/593 (57%), Gaps = 40/593 (6%)

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYA--DAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
           +QIHG+ LK GL  D   ++ LL+  A  ++G L+    VF  +   +   WN++I  ++
Sbjct: 35  RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYS 94

Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANET 494
           +S+    EA+  Y  M       N  TF  +L A SS S  +   Q+HA +IK    +E 
Sbjct: 95  NSKE-PEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEI 153

Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGY-----------IHNELL- 542
              N+LL+ Y K G++     +F ++ ++RD VSWNSMI GY           I N +  
Sbjct: 154 YTTNSLLNVYSKSGDIKSARLLFDQV-DQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPE 212

Query: 543 ------------------PK-AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
                             PK A+NL   M   G +LD+    + L ACA +  L++G  +
Sbjct: 213 RNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWI 272

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           HA   +  +E D ++G  L+DMY+KCG ++ A   F  M  + V  W +MISGYA HG G
Sbjct: 273 HAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRG 332

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC 703
            +AL  F +M+  G  P+ +TF G+L+ACSHAGLV E    F+SM +++G  P +E + C
Sbjct: 333 REALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGC 392

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEME 762
           MVDLLGRAG L + EE I  MP+ PN+ IW  +L AC    N    ELG++   +L +++
Sbjct: 393 MVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGN---LELGKQIGKILIQVD 449

Query: 763 PQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESH 822
           P +   Y+ LA+++A+ G+W   A+ R+ MKE  V K  GCS +++    H F+AGDESH
Sbjct: 450 PGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESH 509

Query: 823 PEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNS 881
           P+   I   L+++ +++R+ GY P+    L DLE + KE  + +HSEK+AV F +++   
Sbjct: 510 PQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKP 569

Query: 882 KLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            + IRI+KNLRVC DCH+  K ISK+  REI++RD  RFH F DG C+CGDYW
Sbjct: 570 GMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 220/472 (46%), Gaps = 52/472 (11%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLE-STDCARRIFEEIETRDLISWNSIISVYSQ 167
           Q+H  +LK+    D + ++ L+A   S    S   AR +F+ I   +   WN++I  YS 
Sbjct: 36  QIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSN 95

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
             +      L+  M      +S+  N YTF  L+ A  S  +S     QQI A + K G 
Sbjct: 96  SKEPEEALLLYHHM----LYHSVPHNAYTFPFLLKACSS--MSALEETQQIHAHIIKMGF 149

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGL 287
            S++Y  ++L++ +++ G+   AR +F+Q+ Q++ VS N +++G                
Sbjct: 150 GSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDG---------------- 193

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
                        Y KCG I+ +  +F  M  ++ +SW +MISG    G  +EA+  F  
Sbjct: 194 -------------YTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHR 240

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M+  G+   N +L+STL +CA LG +  G+ IH    K  ++ D  +   L+ +YA  G 
Sbjct: 241 MQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGD 300

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           L   ++VF  M E     W ++I  +A       EA+++++ M+ AG  PN +TF  IL 
Sbjct: 301 LEEAIEVFRKMEEKGVSVWTAMISGYA-IHGRGREALEWFMKMQTAGVEPNQMTFTGILT 359

Query: 468 AASSFSMGKLGHQVHAQVIKYNVAN-----ETTIEN--ALLSCYGKCGEMDDCEKIFARM 520
           A S   +      VH   + +         + +IE+   ++   G+ G + + E++   M
Sbjct: 360 ACSHAGL------VHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENM 413

Query: 521 SERRDEVSWNSMISG-YIHNEL-LPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
             + +   W ++++  +IH  L L K +  +   +  G    +   A++ +A
Sbjct: 414 PVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAA 465



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 161/363 (44%), Gaps = 65/363 (17%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDE---------------- 45
           ++ +  H  I+K GF  +++  N+L+NVY + GD+ SA  LFD+                
Sbjct: 135 EETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGY 194

Query: 46  ---------------MPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
                          MP+RN +SW  ++SG    G   EA  +F  M  AG  L+  AL 
Sbjct: 195 TKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALV 254

Query: 91  SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
           S L+AC + G      G  +H  + K     D ++  VLI MY  C +  + A  +F ++
Sbjct: 255 STLQACADLGV--LDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEE-AIEVFRKM 311

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVL 209
           E + +  W ++IS Y+  G      + F +MQ  G    ++PN+ TF  ++TA +++ ++
Sbjct: 312 EEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAG----VEPNQMTFTGILTACSHAGLV 367

Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK--------- 260
             + LL +  +M +  G    +     +V    R G    A ++ E M  K         
Sbjct: 368 HEAKLLFE--SMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGAL 425

Query: 261 -NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG-----LVNMYAKCGTIDDSRSVF 314
            N   ++G +E    GK++   LI+      V  G+G     L +++A  G  + +  V 
Sbjct: 426 LNACHIHGNLE---LGKQIGKILIQ------VDPGHGGRYIHLASIHAAAGEWNQAARVR 476

Query: 315 RFM 317
           R M
Sbjct: 477 RQM 479



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/349 (22%), Positives = 151/349 (43%), Gaps = 36/349 (10%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLIN--VYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
           ++ +  H Q+LK G   D    + L+        G LA A  +FD +   N+  W  ++ 
Sbjct: 32  EELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIR 91

Query: 60  GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
           GY++     EA  ++  M+      N Y    +L+AC     S  +   Q+H  ++K   
Sbjct: 92  GYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSM--SALEETQQIHAHIIKMGF 149

Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
             +   +N L+ +Y    +    AR +F++++ RD +SWNS+I  Y++ G+    +++F+
Sbjct: 150 GSEIYTTNSLLNVYSKSGD-IKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFN 208

Query: 180 RMQRE----------GFRYSLKPNEY--TFGSLITA-------AYSSVLSGSYLL----- 215
            M             G   + KP E    F  + TA       A  S L     L     
Sbjct: 209 HMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQ 268

Query: 216 -QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--- 271
            + I A +KK  +  D  +G  L+  +A+ G+   A ++F +M +K V     ++ G   
Sbjct: 269 GKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAI 328

Query: 272 RRKGKEVHGYLIR---SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
             +G+E   + ++   +G+        G++   +  G + +++ +F  M
Sbjct: 329 HGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESM 377


>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
 gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
          Length = 635

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 221/625 (35%), Positives = 330/625 (52%), Gaps = 58/625 (9%)

Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL--KVFFLM 418
           +S   +C S+  +   +QIH   +K G+  +  + N +LS      +   C   ++F  +
Sbjct: 18  LSLFETCKSMYHL---KQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTI 74

Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
           PE    SWN +   ++   A     V  YL+M      P+  T+  +    +     +LG
Sbjct: 75  PEPSVFSWNIMFKGYSRI-ACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLG 133

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCG------------------------------ 508
            ++H  V+KY + +     NAL++ Y  CG                              
Sbjct: 134 RELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRI 193

Query: 509 ------------------EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
                             ++D   K F +M ER D VSW +MI GY+      +A+ L  
Sbjct: 194 KKDVISWTAIVTGFVNTGQVDAARKYFHKMPER-DHVSWTAMIDGYLRLNCYKEALMLFR 252

Query: 551 FMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCG 610
            M     + D FT  +VL+ACA +  LE G  +     +  ++ D  +G+AL+DMY KCG
Sbjct: 253 EMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCG 312

Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
            ++ A   F+ +P R+ ++W +M+ G A +G G++AL +FSQM      PD VT+VGVLS
Sbjct: 313 NVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLS 372

Query: 671 ACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNS 730
           AC+H G+VDEG K F SM+  +G+ P +  + CMVDLLG+AG L +  E I  MP+ PNS
Sbjct: 373 ACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNS 432

Query: 731 LIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARK 790
           ++W  +LGA CR + +  E+  +A   + E+EP N   YVL  N+YA+  KW+ + + R+
Sbjct: 433 IVWGALLGA-CRIH-KDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQ 490

Query: 791 AMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKF 850
            M +  +KK  GCS + M   VH FVAGD+SHP+   IY KL ++   ++ AGY P T  
Sbjct: 491 VMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSE 550

Query: 851 ALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVG 909
              D+  E KE+ V  HSEK+A+AF L  +   + IRI+KNLR+C DCH   K +SK+  
Sbjct: 551 VFLDIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYD 610

Query: 910 REIVLRDSNRFHHFNDGKCSCGDYW 934
           RE+++RD  RFHHF  G CSC DYW
Sbjct: 611 REVIVRDRTRFHHFRHGSCSCKDYW 635



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 206/427 (48%), Gaps = 21/427 (4%)

Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC-ARRIFEEIETRDLISWNSIISVYSQ 167
           Q+H   +K+    + ++ N +++   S      C AR++F+ I    + SWN +   YS+
Sbjct: 32  QIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYSR 91

Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
               I+  KL   +  E    ++KP+ YT+  L      SV     L +++   V K GL
Sbjct: 92  ----IACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSV--ALQLGRELHCHVVKYGL 145

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGL 287
            S+++  +AL++ ++  G    AR IF+   + +VV+ N ++ G  +        I+  +
Sbjct: 146 DSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNR--------IKKDV 197

Query: 288 FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
               A+  G VN     G +D +R  F  M  +D VSW  MI G  +  CY+EA+M F  
Sbjct: 198 ISWTAIVTGFVNT----GQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFRE 253

Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
           M+   +    F+++S L++CA LG + LG+ I     K  + +D  V NAL+ +Y   G 
Sbjct: 254 MQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGN 313

Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
           +   L +F  +P+ D+ +W +++   A +     EA+  +  M +A  +P+ VT++ +L+
Sbjct: 314 VEMALSIFNTLPQRDKFTWTAMVVGLAIN-GCGEEALNMFSQMLKASVTPDEVTYVGVLS 372

Query: 468 AASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
           A +   M   G +  A +  ++ +         ++   GK G + +  +I   M  + + 
Sbjct: 373 ACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNS 432

Query: 527 VSWNSMI 533
           + W +++
Sbjct: 433 IVWGALL 439



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 145/334 (43%), Gaps = 23/334 (6%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           DV     ++  +V  G + +A K F +MP+R+ VSW  ++ GY       EA  +F+EM 
Sbjct: 196 DVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQ 255

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
            +    + + + SVL AC + G    + G  +   + K+    D  V N LI MY  C  
Sbjct: 256 TSKIKPDEFTMVSVLTACAQLG--ALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKC-G 312

Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
           + + A  IF  +  RD  +W +++   +  G       +FS+M     + S+ P+E T+ 
Sbjct: 313 NVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQM----LKASVTPDEVTYV 368

Query: 199 SLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
            +++A   +  V  G        +M  + G+  ++     +V    + G+   A +I + 
Sbjct: 369 GVLSACTHTGMVDEGKKFFA---SMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKN 425

Query: 257 M-IQKNVVSMNGLMEGRR--KGKEVHGYLIRSGLFDMVAVGNGLV-----NMYAKCGTID 308
           M ++ N +    L+   R  K  E+    I   L   +   NG V     N+YA C   D
Sbjct: 426 MPMKPNSIVWGALLGACRIHKDAEMAERAIEQIL--ELEPNNGAVYVLQCNIYAACNKWD 483

Query: 309 DSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAI 342
             R + + M+ +  +      S ++ NG   E +
Sbjct: 484 KLRELRQVMMDR-GIKKTPGCSLIEMNGIVHEFV 516



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 102/525 (19%), Positives = 199/525 (37%), Gaps = 127/525 (24%)

Query: 6   LFHLQILKHGFAYDVFLCNTLINVYV-------RVGDLASASKLFDEMPDRNSVSWACIV 58
           ++HL+ +         +CN +I   +         GD+  A +LFD +P+ +  SW  + 
Sbjct: 27  MYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMF 86

Query: 59  SGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
            GY+          ++ EM+      + Y    + +          + G ++HC V+K  
Sbjct: 87  KGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTR--SVALQLGRELHCHVVKYG 144

Query: 119 QTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQ-RGDTIS---- 173
              +    N LI MY  C    D AR IF+     D+++WN++IS Y++ + D IS    
Sbjct: 145 LDSNVFAHNALINMYSLC-GLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAI 203

Query: 174 ------------VFKLFSRMQ---------------------------REGFRYSLKPNE 194
                         K F +M                            RE     +KP+E
Sbjct: 204 VTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDE 263

Query: 195 YTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIF 254
           +T  S++TA   + L    L + I   + K  + +D +VG+AL+  + + GN   A  IF
Sbjct: 264 FTMVSVLTAC--AQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIF 321

Query: 255 EQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
             + Q++  +   ++ G                  +   G   +NM+++         + 
Sbjct: 322 NTLPQRDKFTWTAMVVG----------------LAINGCGEEALNMFSQ---------ML 356

Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
           +  +  D V++  ++S     G  +E    F +M                          
Sbjct: 357 KASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTA------------------------ 392

Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA- 432
                     + G++ +++    ++ L   AG+L    ++   MP + + + W +++GA 
Sbjct: 393 ----------RHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGAC 442

Query: 433 --FADSEALVSEAVKYYLDMRRAGWSPNGVTFI---NILAAASSF 472
               D+E +   A++  L++       NG  ++   NI AA + +
Sbjct: 443 RIHKDAE-MAERAIEQILELE----PNNGAVYVLQCNIYAACNKW 482


>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
 gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 212/532 (39%), Positives = 318/532 (59%), Gaps = 7/532 (1%)

Query: 406 GYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINI 465
           G +S   ++F  M +     WN+++  +  +  +  +AV  Y  MR  G  P+  TF  +
Sbjct: 83  GDMSYARQLFDEMHKPRPFLWNTIMKGYVKN-GIPDKAVSVYGKMRHLGVRPDPFTFPFV 141

Query: 466 LAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
           + A +  +    G  +H  V+K+ +     +   L+  Y K GE+   E +F  M ER D
Sbjct: 142 IKACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVER-D 200

Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
            V+WN++I+  +      KA+     M   G + D  T  + LSAC  +  LE G E++ 
Sbjct: 201 LVAWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYE 260

Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
                 ++ ++++ +A +DM +KCG +D A   FD MP RNV SW+++I GYA +G  +K
Sbjct: 261 FAREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEK 320

Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV--YGLIPQLEQFSC 703
           AL LFS+MK  G  P++VTF+ VLSACSH G V+EG+++F  M+Q     + P+ E ++C
Sbjct: 321 ALALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYAC 380

Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP 763
           MVDLLGR+G L++   FI  MPI  +  IW  +LGAC  A  +  +LG+  A++LFE+ P
Sbjct: 381 MVDLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGAC--AIHQNIKLGQHVADLLFELAP 438

Query: 764 QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHP 823
           + A  +VLL+NMYA+ G+W  V K R+ MK+   +K A  S V     +H+   GD+SHP
Sbjct: 439 EIASYHVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHP 498

Query: 824 EKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNS-K 882
           +   I  KL++L ++M+  GY+P+T     D+E E KE  +S HSEK+A+AF L   S K
Sbjct: 499 QSASILAKLEDLLKQMKSMGYIPETDSVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPK 558

Query: 883 LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
            PIR+MKNLR+CGDCH+  K +S+I  REI++RD NRFHHF +G CSC D+W
Sbjct: 559 FPIRVMKNLRICGDCHTFCKLVSRITMREIIMRDKNRFHHFKNGICSCKDFW 610



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 162/340 (47%), Gaps = 6/340 (1%)

Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
           G +  +R +F  M       WNT++ G  +NG  ++A+  +  MR  G+    F+    +
Sbjct: 83  GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142

Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
            +CA L  +  G  +HG  +K GL+   +V   L+ +Y   G L     +F  M E D V
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLV 202

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
           +WN++I     +    S+A++ + +M  AG  P+ VT ++ L+A       + G +++  
Sbjct: 203 AWNALIAVCVQT-GFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEF 261

Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
             +  + +   + NA L    KCG+MD    +F  M + R+ +SW+++I GY  N    K
Sbjct: 262 AREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQ-RNVISWSTVIGGYAVNGESEK 320

Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH---ACGVRACLEFDVVIGSA 601
           A+ L   M  +G + ++ TF  VLSAC+    +  G +     A      ++      + 
Sbjct: 321 ALALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYAC 380

Query: 602 LVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARH 640
           +VD+  + G ++ A  F  +MP+  +   W +++   A H
Sbjct: 381 MVDLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIH 420



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 135/263 (51%), Gaps = 6/263 (2%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G  +HG++++ GL  + AV   L+ MY K G +  +  +F  M+ +D V+WN +I+   Q
Sbjct: 154 GLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNALIAVCVQ 213

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
            G   +A+ +F  M   G+   + +++S LS+C  LG +  G++I+    + G+DS++ V
Sbjct: 214 TGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGIDSNIIV 273

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA-DSEALVSEAVKYYLDMRRA 453
            NA L + A  G + + + +F  MP+ + +SW++VIG +A + E+   +A+  +  M+  
Sbjct: 274 HNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGES--EKALALFSRMKNQ 331

Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVH---AQVIKYNVANETTIENALLSCYGKCGEM 510
           G  PN VTF+ +L+A S       G Q     AQ    N+         ++   G+ G +
Sbjct: 332 GVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMVDLLGRSGHL 391

Query: 511 DDCEKIFARMSERRDEVSWNSMI 533
           ++       M    D   W +++
Sbjct: 392 EEAYNFIKIMPIEADPGIWGALL 414



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 168/387 (43%), Gaps = 28/387 (7%)

Query: 34  GDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVL 93
           GD++ A +LFDEM       W  I+ GY   G+ ++A  ++ +M   G   + +    V+
Sbjct: 83  GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142

Query: 94  RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
           +AC E        GM  H  V+K    F   V   L+ MY    E   CA  +F  +  R
Sbjct: 143 KACAELAELWAGLGMHGH--VVKHGLEFVAAVRTELMIMYVKFGE-LGCAEFLFGSMVER 199

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY 213
           DL++WN++I+V  Q G +    + F  M   G    +KP+  T  S ++A     L    
Sbjct: 200 DLVAWNALIAVCVQTGFSSKALQSFREMGMAG----IKPDSVTIVSALSAC--GHLGCLE 253

Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR 273
             ++I    ++ G+ S++ V +A +   A+ G+   A  +F++M Q+NV+S + ++ G  
Sbjct: 254 TGEEIYEFAREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYA 313

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYA------KCGTIDDSRSVFRFMIGKDSVS--- 324
              E    L          V    V   A        G +++    F FM   D  +   
Sbjct: 314 VNGESEKALALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQP 373

Query: 325 ----WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
               +  M+  L ++G  EEA  NF  +    + +      + L +CA    I LGQ  H
Sbjct: 374 RKEHYACMVDLLGRSGHLEEA-YNFIKIMP--IEADPGIWGALLGACAIHQNIKLGQ--H 428

Query: 381 GEGLKLGLDSDVSVSNALLS-LYADAG 406
              L   L  +++  + LLS +YA AG
Sbjct: 429 VADLLFELAPEIASYHVLLSNMYAAAG 455



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 104/196 (53%), Gaps = 7/196 (3%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H  ++KHG  +   +   L+ +YV+ G+L  A  LF  M +R+ V+W  +++     G S
Sbjct: 158 HGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNALIAVCVQTGFS 217

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
           ++A + F+EM  AG   +   + S L AC   G    + G +++    +     + +V N
Sbjct: 218 SKALQSFREMGMAGIKPDSVTIVSALSACGHLG--CLETGEEIYEFAREEGIDSNIIVHN 275

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
             + M   C +  D A  +F+E+  R++ISW+++I  Y+  G++     LFSRM+ +G  
Sbjct: 276 ARLDMCAKCGD-MDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSRMKNQG-- 332

Query: 188 YSLKPNEYTFGSLITA 203
             ++PN  TF ++++A
Sbjct: 333 --VQPNYVTFLAVLSA 346



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 45/88 (51%)

Query: 13  KHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACK 72
           + G   ++ + N  +++  + GD+  A  LFDEMP RN +SW+ ++ GY   G S +A  
Sbjct: 264 EEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALA 323

Query: 73  MFKEMVRAGFLLNRYALGSVLRACQECG 100
           +F  M   G   N     +VL AC   G
Sbjct: 324 LFSRMKNQGVQPNYVTFLAVLSACSHTG 351


>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
 gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
 gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
 gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 641

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 219/554 (39%), Positives = 324/554 (58%), Gaps = 13/554 (2%)

Query: 390 SDVSVSNALLS-LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
            D+   N L+S L     +L    ++F  MP+ D  +W++++  +         A+  Y 
Sbjct: 92  PDICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYT-RHGQPEAALALYR 150

Query: 449 DMRRA---GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV---ANETTIENALLS 502
            M+       + N  T  + LAAA++   G+ G ++H  V++  +     +  + +AL  
Sbjct: 151 RMQEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALAD 210

Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ-RGQRLDH 561
            Y KCG +DD  ++F RM  R D VSW +M+  Y       +   L   M++ RG R + 
Sbjct: 211 MYAKCGRVDDARRVFDRMPVR-DAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNE 269

Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
           FT+A VL ACA  A    G +VH    ++         SAL+ MYSKCG +  A R F+ 
Sbjct: 270 FTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEA 329

Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
           M   ++ SW ++ISGYA++G  ++AL  F      G  PDHVTFVGVLSAC+HAGLVD+G
Sbjct: 330 MAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKG 389

Query: 682 FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACC 741
            + F S+ + Y +    + ++C++DLL R+G+ ++ E+ I  M + PN  +W ++LG  C
Sbjct: 390 LEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGG-C 448

Query: 742 RANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA 801
           R + +   L R+AA  LFE+EP+N   YV LAN+YAS G +++V   R+ M+   + K  
Sbjct: 449 RIH-KNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMP 507

Query: 802 GCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKE 861
             SW+ +   VHVF+ GD+SHP+ D IY  LK+L  KM + GYV   +F L D+E E KE
Sbjct: 508 ASSWIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKE 567

Query: 862 DLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRF 920
             + YHSE++AVAF ++      PI++ KNLR+CGDCH+A K IS+IV R+I++RDSNRF
Sbjct: 568 QDIGYHSERLAVAFGIIATPEGSPIKVFKNLRICGDCHAAIKLISQIVQRDIIVRDSNRF 627

Query: 921 HHFNDGKCSCGDYW 934
           HHF DG CSC DYW
Sbjct: 628 HHFKDGICSCRDYW 641



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 195/387 (50%), Gaps = 20/387 (5%)

Query: 307 IDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR----DGLMSSNFSLIS 362
           +  +R +F  M  +D  +W+ ++SG  ++G  E A+  +  M+     DG   + F+  S
Sbjct: 111 LPSARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRMQEEPGNDG-ADNEFTASS 169

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDS---DVSVSNALLSLYADAGYLSRCLKVFFLMP 419
            L++ A+      G+++H   ++ G+D+   D  + +AL  +YA  G +    +VF  MP
Sbjct: 170 ALAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMP 229

Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA-GWSPNGVTFINILAAASSFSMGKLG 478
             D VSW +++  + D      E  + +L M R  G  PN  T+  +L A + F++   G
Sbjct: 230 VRDAVSWTAMVERYFDG-GRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFG 288

Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
            QVH ++ K    +    E+ALL  Y KCG+M    ++F  M+ + D VSW ++ISGY  
Sbjct: 289 RQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMA-KPDLVSWTAVISGYAQ 347

Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV-HACGVRACLEFDVV 597
           N    +A+      ++ G + DH TF  VLSACA    +++G+E+ H+   + C+E    
Sbjct: 348 NGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTAD 407

Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARH---GHGDKALTLFSQM 653
             + ++D+ S+ G+ + A +    M V+ N + W S++ G   H   G   +A     ++
Sbjct: 408 HYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEI 467

Query: 654 KLDGPLPDHVTFVGVLSACSHAGLVDE 680
           + + P     T+V + +  +  GL DE
Sbjct: 468 EPENP----ATYVTLANIYASVGLFDE 490



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 157/325 (48%), Gaps = 21/325 (6%)

Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQK--NVVSMNGLMEGR-----------RKGK 276
           D +  SALVSG+ R G    A  ++ +M ++  N  + N                 R G+
Sbjct: 125 DHFAWSALVSGYTRHGQPEAALALYRRMQEEPGNDGADNEFTASSALAAAAAARCGRAGR 184

Query: 277 EVHGYLIRSGL----FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           E+H +++R G+     D V + + L +MYAKCG +DD+R VF  M  +D+VSW  M+   
Sbjct: 185 ELHCHVVRRGIDAAGGDAV-LWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERY 243

Query: 333 DQNGCYEEAIMNFCAM-RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
              G   E    F  M R  G+  + F+    L +CA       G+Q+HG   K G    
Sbjct: 244 FDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDS 303

Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
               +ALL +Y+  G +   ++VF  M + D VSW +VI  +A +     EA++Y+    
Sbjct: 304 CFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQN-GQPEEALRYFDMFL 362

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQV-HAQVIKYNVANETTIENALLSCYGKCGEM 510
           R+G  P+ VTF+ +L+A +   +   G ++ H+   +Y + +       ++    + G+ 
Sbjct: 363 RSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQF 422

Query: 511 DDCEKIFARMSERRDEVSWNSMISG 535
           +  EK+   M+ + ++  W S++ G
Sbjct: 423 ERAEKMIGNMAVKPNKFLWASLLGG 447



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 150/333 (45%), Gaps = 26/333 (7%)

Query: 2   KDAKLFHLQILKHGF---AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIV 58
           +  +  H  +++ G      D  L + L ++Y + G +  A ++FD MP R++VSW  +V
Sbjct: 181 RAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMV 240

Query: 59  SGYTHKGMSNEACKMFKEMVRA-GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
             Y   G   E  ++F  M+R  G   N +    VLRAC +       FG QVH  + KS
Sbjct: 241 ERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVE--SFGRQVHGRMAKS 298

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
                    + L+ MY  C +    A R+FE +   DL+SW ++IS Y+Q G      + 
Sbjct: 299 GTGDSCFAESALLRMYSKCGD-MGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRY 357

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLL---SDLYVG 234
           F    R G    +KP+  TF  +++A   + L    L  +I   +K+   +   +D Y  
Sbjct: 358 FDMFLRSG----IKPDHVTFVGVLSACAHAGLVDKGL--EIFHSIKEQYCIEHTADHY-- 409

Query: 235 SALVSGFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVHGYLIRS--GLFDM- 290
           + ++   +R G F  A K+   M ++ N      L+ G R  K V G   R+   LF++ 
Sbjct: 410 ACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNV-GLARRAAEALFEIE 468

Query: 291 ---VAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
               A    L N+YA  G  D+   V R M  K
Sbjct: 469 PENPATYVTLANIYASVGLFDEVEDVRRIMESK 501



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 156/345 (45%), Gaps = 30/345 (8%)

Query: 17  AYDVFLCNTLINVYVRVG-DLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFK 75
           A D+   NTLI+   R    L SA +LFD MP R+  +W+ +VSGYT  G    A  +++
Sbjct: 91  APDICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYR 150

Query: 76  EMVRA---GFLLNRYA--LGSVLRACQECGPSGFKFGMQVHCLVLKSN---QTFDGLVSN 127
            M          N +         A   CG    + G ++HC V++        D ++ +
Sbjct: 151 RMQEEPGNDGADNEFTASSALAAAAAARCG----RAGRELHCHVVRRGIDAAGGDAVLWS 206

Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
            L  MY  C    D ARR+F+ +  RD +SW +++  Y   G     F+LF  M R    
Sbjct: 207 ALADMYAKC-GRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRT--- 262

Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
             ++PNE+T+  ++ A     +      +Q+   + K+G     +  SAL+  +++ G+ 
Sbjct: 263 RGVRPNEFTYAGVLRACAQFAVES--FGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDM 320

Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYL------IRSGLFDMVAVGNGLVNMY 301
             A ++FE M + ++VS   ++ G  +  +    L      +RSG+        G+++  
Sbjct: 321 GSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSAC 380

Query: 302 AKCGTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEA 341
           A  G +D    +F     ++ I   +  +  +I  L ++G +E A
Sbjct: 381 AHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERA 425


>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 583

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 214/562 (38%), Positives = 332/562 (59%), Gaps = 8/562 (1%)

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           QQ+H   +        S+   L++L   A  ++    +F  +P  D   +NSVI + +  
Sbjct: 26  QQVHAHLIVTSYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
             L    V YY  M  +  SP+  TF +++ + +  S  K+G  VH   +      +T +
Sbjct: 86  R-LPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCHAVVSGFGLDTYV 144

Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
           + AL++ Y KCG+M+   ++F RM E+   V+WNS++SG+  N L   A+ + + M + G
Sbjct: 145 QAALVTFYSKCGDMEAARQVFDRMPEK-SVVAWNSLVSGFEQNGLAEDAIRVFYQMRESG 203

Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
              D  TF ++LSACA    +  G  VH   V   L+ +V +G+AL+++YS+CG +  A 
Sbjct: 204 FEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGKAR 263

Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD-GPLPDHVTFVGVLSACSHA 675
             FD M   NV +W +MIS Y  HG+G +A+ LF++M+ D G +P++VTFV VLSAC+HA
Sbjct: 264 EVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAVLSACAHA 323

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL---I 732
           GLV++G   +K M++ Y LIP +E   C+VD+LGRAG LD+   FI ++  T N+    +
Sbjct: 324 GLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQLDATGNATAPAL 383

Query: 733 WRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAM 792
           W  +LGAC     R  +LG + A  L  +EP+N  ++V+L+N+YA  GK ++V+  R  M
Sbjct: 384 WTAMLGAC--KMHRNYDLGVEIAKRLIALEPENPGHHVMLSNIYALSGKTDEVSHIRDRM 441

Query: 793 KEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFAL 852
               ++K+ G S + +++  ++F  GDESH E   IY  L+ L  + ++ GY P ++  +
Sbjct: 442 MRNNLRKQVGYSIIEVENKTYLFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVM 501

Query: 853 FDLEPESKEDLVSYHSEKIAVAFVLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREI 912
             +E E KE  + YHSEK+AVAF L +     I ++KNLR+C DCHSAFK+IS +  R+I
Sbjct: 502 HQVEEEEKEFALRYHSEKLAVAFGLLKTVDSAITVVKNLRICEDCHSAFKYISIVSNRQI 561

Query: 913 VLRDSNRFHHFNDGKCSCGDYW 934
           ++RD  RFHHF +G CSC DYW
Sbjct: 562 IVRDKLRFHHFQNGSCSCLDYW 583



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 191/418 (45%), Gaps = 17/418 (4%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           ++ ++VH +LI +      ++   L+ +      I  +  +F  +   D   +N++I   
Sbjct: 23  KQLQQVHAHLIVTSYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKST 82

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            +       +  +  M    +  SN++  S + SCA L  + +G+ +H   +  G   D 
Sbjct: 83  SKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCHAVVSGFGLDT 142

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V  AL++ Y+  G +    +VF  MPE   V+WNS++  F +   L  +A++ +  MR 
Sbjct: 143 YVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVSGF-EQNGLAEDAIRVFYQMRE 201

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           +G+ P+  TF+++L+A +      LG  VH  ++   +     +  AL++ Y +CG++  
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGK 261

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR-GQRLDHFTFATVLSAC 571
             ++F +M E  +  +W +MIS Y  +    +A++L   M    G   ++ TF  VLSAC
Sbjct: 262 AREVFDKMKE-TNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAVLSAC 320

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVRNV 627
           A    +E G  V+    R    + ++ G      +VDM  + G +D A RF   +     
Sbjct: 321 AHAGLVEDGRSVYK---RMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQLDATGN 377

Query: 628 YS----WNSMISGYARHGHGDKALTLFSQM-KLDGPLPDHVTFVGVLSACSHAGLVDE 680
            +    W +M+     H + D  + +  ++  L+   P H   +  + A S  G  DE
Sbjct: 378 ATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPENPGHHVMLSNIYALS--GKTDE 433



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 156/321 (48%), Gaps = 16/321 (4%)

Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN----------GLMEGRRKGKE 277
           L D ++ ++++   ++L    +    + +M+  NV   N            +   + GK 
Sbjct: 69  LPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKG 128

Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
           VH + + SG      V   LV  Y+KCG ++ +R VF  M  K  V+WN+++SG +QNG 
Sbjct: 129 VHCHAVVSGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGL 188

Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
            E+AI  F  MR  G    + + +S LS+CA  G I LG  +H   +  GLD +V +  A
Sbjct: 189 AEDAIRVFYQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTA 248

Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR-RAGWS 456
           L++LY+  G + +  +VF  M E +  +W ++I A+  +     +AV  +  M    G  
Sbjct: 249 LINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYG-THGYGKQAVDLFNKMEDDCGSI 307

Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEK 515
           PN VTF+ +L+A +   + + G  V+ ++ + Y +         ++   G+ G +D+  +
Sbjct: 308 PNNVTFVAVLSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYR 367

Query: 516 IFARMSERRDEVS---WNSMI 533
              ++    +  +   W +M+
Sbjct: 368 FIQQLDATGNATAPALWTAML 388



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 112/508 (22%), Positives = 220/508 (43%), Gaps = 71/508 (13%)

Query: 2   KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
           K  +  H  ++   +     L   LI +      +A    LF  +P  +   +  ++   
Sbjct: 23  KQLQQVHAHLIVTSYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKST 82

Query: 62  THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
           +   +       ++ M+ +    + Y   SV+++C +   S  K G  VHC  + S    
Sbjct: 83  SKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADL--SALKIGKGVHCHAVVSGFGL 140

Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
           D  V   L+  Y  C +  + AR++F+ +  + +++WNS++S + Q G      ++F +M
Sbjct: 141 DTYVQAALVTFYSKCGD-MEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVFYQM 199

Query: 182 QREGFRYSLKPNEYTFGSLITA-AYSSVLS-GSYLLQQILAMVKKAGLLSDLYVGSALVS 239
           +  GF    +P+  TF SL++A A +  +S GS++ Q I++     GL  ++ +G+AL++
Sbjct: 200 RESGF----EPDSATFVSLLSACAQTGAISLGSWVHQYIVS----EGLDVNVKLGTALIN 251

Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS-GLF-----DMVAV 293
            ++R G+   AR++F++M + NV +   ++         HGY  ++  LF     D  ++
Sbjct: 252 LYSRCGDVGKAREVFDKMKETNVAAWTAMI----SAYGTHGYGKQAVDLFNKMEDDCGSI 307

Query: 294 GN-----GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
            N      +++  A  G ++D RSV++ M    + S+  +I G++ + C  +       +
Sbjct: 308 PNNVTFVAVLSACAHAGLVEDGRSVYKRM----TESYR-LIPGVEHHVCIVD------ML 356

Query: 349 RRDGLMSSNFSLISTL-----SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA 403
            R G +   +  I  L     ++  +L   MLG         LG    V ++  L++L  
Sbjct: 357 GRAGFLDEAYRFIQQLDATGNATAPALWTAMLGACKMHRNYDLG----VEIAKRLIALEP 412

Query: 404 D-AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD--MRRAGWSPNGV 460
           +  G+      ++ L  + D+VS                    +  D  MR       G 
Sbjct: 413 ENPGHHVMLSNIYALSGKTDEVS--------------------HIRDRMMRNNLRKQVGY 452

Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKY 488
           + I +      FSMG   HQ   ++ +Y
Sbjct: 453 SIIEVENKTYLFSMGDESHQETGEIYRY 480


>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 244/662 (36%), Positives = 352/662 (53%), Gaps = 37/662 (5%)

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            +D + S+F  +    +   N ++    +    E  +  +  +RR+G     FS    L 
Sbjct: 64  ALDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLK 123

Query: 366 SCASLGWIMLGQQIHGEGLKLGL-DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
           + + L  + LG +IHG   K G   +D  + +AL+++YA  G +     +F  M   D V
Sbjct: 124 AVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVV 183

Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA---ASSFSMGKLGHQV 481
           +WN +I  ++ + A     +K Y +M+ +G  P+ +    +L+A   A + S GK  HQ 
Sbjct: 184 TWNIMIDGYSQN-AHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQF 242

Query: 482 ----------HAQVIKYNV------------------ANETTIENALLSCYGKCGEMDDC 513
                     H Q    N+                  +    +  A+LS Y K G + D 
Sbjct: 243 IKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDA 302

Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
             IF RM E+ D V W++MISGY  +    +A+ L   M +R    D  T  +V+SACA+
Sbjct: 303 RFIFDRMVEK-DLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACAN 361

Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
           V  L +   +H    +      + I +AL+DMY+KCG +  A   F+ MP +NV SW+SM
Sbjct: 362 VGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSM 421

Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
           I+ +A HG  D A+ LF +MK     P+ VTF+GVL ACSHAGLV+EG K F SM   + 
Sbjct: 422 INAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHR 481

Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
           + PQ E + CMVDL  RA  L K  E I  MP  PN +IW +++ AC   N  + ELG  
Sbjct: 482 ISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSAC--QNHGEIELGEF 539

Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
           AA  L E+EP +    V+L+N+YA   +W+DV   RK MK   V KE  CS + + + VH
Sbjct: 540 AATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVH 599

Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
           VF+  D  H + D IY+KL  +  +++  GY P T   L DLE E K+++V +HSEK+A+
Sbjct: 600 VFMMADRYHKQSDEIYKKLDAVVSQLKLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLAL 659

Query: 874 AFVLTRNSKLP-IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
            + L    K   IRI+KNLR+C DCHS  K +SK+   EIV+RD  RFHHFN G CSC D
Sbjct: 660 CYGLIGERKESCIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRD 719

Query: 933 YW 934
           YW
Sbjct: 720 YW 721



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/470 (23%), Positives = 209/470 (44%), Gaps = 80/470 (17%)

Query: 36  LASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRA 95
           L  A  LF  +P+  +     ++  ++          ++  + R GF L+R++   +L+A
Sbjct: 65  LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124

Query: 96  CQECGPSGFKFGMQVHCLVLKSNQTF-DGLVSNVLIAMYGSCLESTDCARRIFEEIETRD 154
             +   S    G+++H L  K      D  + + LIAMY +C    D AR +F+++  RD
Sbjct: 125 VSKL--SALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMD-ARFLFDKMSHRD 181

Query: 155 LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLS--- 210
           +++WN +I  YSQ      V KL+  M+  G     +P+     ++++A A++  LS   
Sbjct: 182 VVTWNIMIDGYSQNAHYDHVLKLYEEMKTSG----TEPDAIILCTVLSACAHAGNLSYGK 237

Query: 211 -------------GSYLLQQILAMVKKAG---LLSDLY---------VGSALVSGFARLG 245
                        GS++   ++ M    G   L  ++Y         V +A++SG+A+LG
Sbjct: 238 AIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLG 297

Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEG------------------RRK------------- 274
               AR IF++M++K++V  + ++ G                  RR+             
Sbjct: 298 MVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVIS 357

Query: 275 ----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
                      K +H Y  ++G    + + N L++MYAKCG +  +R VF  M  K+ +S
Sbjct: 358 ACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVIS 417

Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
           W++MI+    +G  + AI  F  M+   +  +  + I  L +C+  G +  GQ+     +
Sbjct: 418 WSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMI 477

Query: 385 -KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
            +  +         ++ LY  A +L + +++   MP   + + W S++ A
Sbjct: 478 NEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSA 527



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 107/449 (23%), Positives = 188/449 (41%), Gaps = 67/449 (14%)

Query: 16  FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFK 75
           F  D F+ + LI +Y   G +  A  LFD+M  R+ V+W  ++ GY+     +   K+++
Sbjct: 147 FHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYE 206

Query: 76  EMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS 135
           EM  +G   +   L +VL AC   G     +G  +H  +  +       +   L+ MY +
Sbjct: 207 EMKTSGTEPDAIILCTVLSACAHAG--NLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYAN 264

Query: 136 C------------------------------LESTDCARRIFEEIETRDLISWNSIISVY 165
           C                              L     AR IF+ +  +DL+ W+++IS Y
Sbjct: 265 CGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGY 324

Query: 166 SQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKA 225
           ++    +   +LF+ MQR      + P++ T  S+I+A  +  +      + I     K 
Sbjct: 325 AESYQPLEALQLFNEMQRR----RIVPDQITMLSVISACAN--VGALVQAKWIHTYADKN 378

Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS 285
           G    L + +AL+  +A+ GN   AR++FE M +KNV+S + ++       +    +   
Sbjct: 379 GFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAI--- 435

Query: 286 GLFDMVAVGN---------GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
            LF  +   N         G++   +  G +++ +  F  MI +  +S        +  G
Sbjct: 436 ALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQR-----EHYG 490

Query: 337 C----YEEAIMNFCAMRRDGLMSSNFSLI---STLSSCASLGWIMLGQQIHGEGLKLGLD 389
           C    Y  A     AM     M    ++I   S +S+C + G I LG+      L+L  D
Sbjct: 491 CMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPD 550

Query: 390 SD---VSVSN--ALLSLYADAGYLSRCLK 413
            D   V +SN  A    + D G + + +K
Sbjct: 551 HDGALVVLSNIYAKEKRWDDVGLVRKLMK 579



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 150/355 (42%), Gaps = 49/355 (13%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP----------------- 47
           K  H  I  +GF     +  +L+N+Y   G +  A +++D++P                 
Sbjct: 237 KAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKL 296

Query: 48  --------------DRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVL 93
                         +++ V W+ ++SGY       EA ++F EM R   + ++  + SV+
Sbjct: 297 GMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVI 356

Query: 94  RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
            AC   G         +H    K+       ++N LI MY  C      AR +FE +  +
Sbjct: 357 SACANVG--ALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVK-AREVFENMPRK 413

Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF-GSLITAAYSSVLSGS 212
           ++ISW+S+I+ ++  GD  S   LF RM+ +    +++PN  TF G L   +++ ++   
Sbjct: 414 NVISWSSMINAFAMHGDADSAIALFHRMKEQ----NIEPNGVTFIGVLYACSHAGLVEEG 469

Query: 213 YLLQQIL-AMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQKNVVSMNGLME 270
              Q+   +M+ +  +         +V  + R  +   A ++ E M    NV+    LM 
Sbjct: 470 ---QKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMS 526

Query: 271 GRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFRFMIGK 320
             +   E+  G    + L ++    +G    L N+YAK    DD   V + M  K
Sbjct: 527 ACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHK 581



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 25/179 (13%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
           AK  H    K+GF   + + N LI++Y + G+L  A ++F+ MP +N +SW+ +++ +  
Sbjct: 368 AKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAM 427

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
            G ++ A  +F  M       N      VL AC   G            LV +  + F  
Sbjct: 428 HGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAG------------LVEEGQKFFSS 475

Query: 124 LVSNVLIA----MYGSCLESTDCA----RRIFEEIET----RDLISWNSIISVYSQRGD 170
           +++   I+     YG C+    C     R+  E IET     ++I W S++S     G+
Sbjct: 476 MINEHRISPQREHYG-CMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGE 533


>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 247/695 (35%), Positives = 371/695 (53%), Gaps = 90/695 (12%)

Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG--KDSVSWNTMISGLDQNG 336
           H ++++ G      V N +++MYA+ G I  +R VF  +    +    WN M+SG     
Sbjct: 118 HAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSG----- 172

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
                   +     +G     F ++                           + +V    
Sbjct: 173 --------YWKWESEGQAQWLFDVMP--------------------------ERNVITWT 198

Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
           A+++ YA    L    + F  MPE   VSWN+++  +A +  L  E ++ + +M  AG  
Sbjct: 199 AMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQN-GLAEEVLRLFDEMVNAGIE 257

Query: 457 PNGVTFINILAAASSFS----MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
           P+  T++ +++A SS         L   +H + I+ N      +  ALL  Y KCG +  
Sbjct: 258 PDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLN----CFVRTALLDMYAKCGSIGA 313

Query: 513 CEKIFARMSERRDEVSWNSMISGYIH-------NEL---LPKAMNLVWFMM-----QRGQ 557
             +IF  +   R+ V+WN+MIS Y          EL   +P    + W  M     Q GQ
Sbjct: 314 ARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQ 373

Query: 558 RL-----------------DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
                              D  T  +V+SAC  +  LE G  V        ++  +   +
Sbjct: 374 SAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHN 433

Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
           A++ MYS+CG ++ A R F  M  R+V S+N++ISG+A HGHG +A+ L S MK  G  P
Sbjct: 434 AMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEP 493

Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
           D VTF+GVL+ACSHAGL++EG K F+S+       P ++ ++CMVDLLGR GEL+  +  
Sbjct: 494 DRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGELEDAKRT 548

Query: 721 INKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
           + +MP+ P++ ++ ++L A  R + ++ ELG  AAN LFE+EP N+ N++LL+N+YAS G
Sbjct: 549 MERMPMEPHAGVYGSLLNAS-RIH-KQVELGELAANKLFELEPDNSGNFILLSNIYASAG 606

Query: 781 KWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
           +W+DV + R+AMK+  VKK  G SWV     +H F+  D SH   D IY+ L EL +KMR
Sbjct: 607 RWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMR 666

Query: 841 DAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHS 899
           +AGY+      L D+E E KE++V  HSEK+A+ + +L   +   IR++KNLRVC DCH+
Sbjct: 667 EAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHT 726

Query: 900 AFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
           A K ISK+ GR I++RD+NRFH FNDG CSC DYW
Sbjct: 727 AIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 241/520 (46%), Gaps = 62/520 (11%)

Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
           +F      ++  + S++  YS   D   V  +F  MQ  G R    P+ + +  LI +A 
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVR----PDAFVYPILIKSAG 111

Query: 206 SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM--IQKNVV 263
           +  +          A V K G  SD +V +A++  +ARLG   +ARK+F+++   ++ V 
Sbjct: 112 NGGIG-------FHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVA 164

Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN-----GLVNMYAKCGTIDDSRSVFRFMI 318
             N ++ G  K  E  G      LFD++   N      +V  YAK   ++ +R  F  M 
Sbjct: 165 DWNAMVSGYWKW-ESEGQA--QWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMP 221

Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG-- 376
            +  VSWN M+SG  QNG  EE +  F  M   G+     + ++ +S+C+S G   L   
Sbjct: 222 ERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAAS 281

Query: 377 --QQIHGEGLK----------------------------LGLDSDVSVSNALLSLYADAG 406
             + +H + ++                            LG   +    NA++S Y   G
Sbjct: 282 LVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVG 341

Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADS--EALVSEAVKYYLDMRRAGWSPNGVTFIN 464
            L    ++F  MP  + V+WNS+I  +A +   A+  E  K  +  ++   +P+ VT ++
Sbjct: 342 NLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKL--TPDEVTMVS 399

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           +++A       +LG+ V   + +  +    +  NA++  Y +CG M+D +++F  M+  R
Sbjct: 400 VISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMAT-R 458

Query: 525 DEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVH 584
           D VS+N++ISG+  +    +A+NL+  M + G   D  TF  VL+AC+    LE G +V 
Sbjct: 459 DVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVF 518

Query: 585 ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
                  ++      + +VD+  + G ++ A R  + MP+
Sbjct: 519 ESIKDPAIDHY----ACMVDLLGRVGELEDAKRTMERMPM 554



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 183/406 (45%), Gaps = 50/406 (12%)

Query: 19  DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
           +V     ++  Y +V DL +A + FD MP+R+ VSW  ++SGY   G++ E  ++F EMV
Sbjct: 193 NVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMV 252

Query: 79  RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
            AG   +     +V+ AC   G       + V  L  K  Q  +  V   L+ MY  C  
Sbjct: 253 NAGIEPDETTWVTVISACSSRGDPCLAASL-VRTLHQKQIQ-LNCFVRTALLDMYAKC-G 309

Query: 139 STDCARRIFEEIET-RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
           S   ARRIF+E+   R+ ++WN++IS Y++ G+  S  +LF+ M           N  T+
Sbjct: 310 SIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGR--------NVVTW 361

Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF----YYARKI 253
            S+I A Y+     +  ++    M+    L  D     +++S    LG      +  R +
Sbjct: 362 NSMI-AGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFL 420

Query: 254 FEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSV 313
            E  I+ ++   N                              ++ MY++CG+++D++ V
Sbjct: 421 TENQIKLSISGHN-----------------------------AMIFMYSRCGSMEDAKRV 451

Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
           F+ M  +D VS+NT+ISG   +G   EAI     M+  G+     + I  L++C+  G +
Sbjct: 452 FQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLL 511

Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
             G+++  E +K   D  +     ++ L    G L    +    MP
Sbjct: 512 EEGRKVF-ESIK---DPAIDHYACMVDLLGRVGELEDAKRTMERMP 553



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 126/578 (21%), Positives = 235/578 (40%), Gaps = 105/578 (18%)

Query: 5   KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKL-FDEMPDRNSVSWACIVSGYTH 63
           +  H QI+ +   +  +    LIN   R+      + L F+   + N   +  ++  Y+H
Sbjct: 18  RQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRFYSH 77

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                +   MF+ M   G   + +    ++++    G  G  F    H  VLK     D 
Sbjct: 78  LQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSA---GNGGIGF----HAHVLKLGHGSDA 130

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEI--------------------------------- 150
            V N +I MY   L     AR++F+EI                                 
Sbjct: 131 FVRNAVIDMYAR-LGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVM 189

Query: 151 ETRDLISWNSIISVYSQRGDTISVFKLFS---------------------------RMQR 183
             R++I+W ++++ Y++  D  +  + F                            R+  
Sbjct: 190 PERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFD 249

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
           E     ++P+E T+ ++I+A  S       L   ++  + +  +  + +V +AL+  +A+
Sbjct: 250 EMVNAGIEPDETTWVTVISACSSR--GDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAK 307

Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAK 303
            G+   AR+IF+++                            G +      N +++ Y +
Sbjct: 308 CGSIGAARRIFDEL----------------------------GAYRNSVTWNAMISAYTR 339

Query: 304 CGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM-RRDGLMSSNFSLIS 362
            G +D +R +F  M G++ V+WN+MI+G  QNG    AI  F  M     L     +++S
Sbjct: 340 VGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVS 399

Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
            +S+C  LG + LG  +     +  +   +S  NA++ +Y+  G +    +VF  M   D
Sbjct: 400 VISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRD 459

Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
            VS+N++I  FA     V EA+     M+  G  P+ VTFI +L A S   + + G +V 
Sbjct: 460 VVSYNTLISGFAAHGHGV-EAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVF 518

Query: 483 AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
             +    + +   + + L    G+ GE++D ++   RM
Sbjct: 519 ESIKDPAIDHYACMVDLL----GRVGELEDAKRTMERM 552



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/330 (21%), Positives = 137/330 (41%), Gaps = 29/330 (8%)

Query: 474 MGKLGH--QVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNS 531
           +G   H  Q+HAQ+I  ++ +       L++   +         +    +   +   + S
Sbjct: 11  VGNFSHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTS 70

Query: 532 MISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC 591
           M+  Y H +   K + +   M   G R D F +  ++ +  +      G+  HA  ++  
Sbjct: 71  MLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGN-----GGIGFHAHVLKLG 125

Query: 592 LEFDVVIGSALVDMYSKCGRIDYASRFFDLMP--VRNVYSWNSMISGYARHGHGDKALTL 649
              D  + +A++DMY++ G I +A + FD +P   R V  WN+M+SGY +     +A  L
Sbjct: 126 HGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWL 185

Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
           F  M    P  + +T+  +++  +    ++   ++F  M +       +  ++ M+    
Sbjct: 186 FDVM----PERNVITWTAMVTGYAKVKDLEAARRYFDCMPE-----RSVVSWNAMLSGYA 236

Query: 710 RAGELDKIEEFINKM---PITPNSLIWRTVLGACCRAN--CRKTELGRKAANMLFEMEPQ 764
           + G  +++    ++M    I P+   W TV+ AC      C    L R       ++   
Sbjct: 237 QNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQL--- 293

Query: 765 NAVNYVLLANMYASGGKWEDVAKARKAMKE 794
           N      L +MYA  G    +  AR+   E
Sbjct: 294 NCFVRTALLDMYAKCG---SIGAARRIFDE 320


>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 222/560 (39%), Positives = 336/560 (60%), Gaps = 6/560 (1%)

Query: 376 GQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFAD 435
           G Q+H   LK GL +   VS+ L++LY+        L+VF   P+    +W+SVI AFA 
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103

Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
           +EA +  A++++  M   G  P+   + +   A        +G  VH   +K     +  
Sbjct: 104 NEAPLL-ALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVF 162

Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
           + ++L+  Y KCGE+ D   +F  M ER + VSW+ MI GY   +   +A+ L    +  
Sbjct: 163 VGSSLVDMYAKCGEIGDARHLFDEMPER-NVVSWSGMIYGYAQLDDGVEALTLFKQALIE 221

Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
              ++ FTF++V+  C+S   LE G  +H   ++   +    +GSAL+ +YSKCG I+ A
Sbjct: 222 DVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGA 281

Query: 616 SRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHA 675
            + FD +P RN+  WNSM+   A+H H  +   LF +M   G  P+ + F+ VL ACSHA
Sbjct: 282 YQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHA 341

Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRT 735
           GLV++G ++F S+ + YG+ P+ E ++ +VDLLGRAG+L +    I +MP+ P   +W  
Sbjct: 342 GLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGA 400

Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
           +L   CR + + TE+    A+ + EM+  ++  +VLL+N YA+ G++E+ A+ RK +++ 
Sbjct: 401 LLTG-CRIH-KDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDR 458

Query: 796 EVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDL 855
            VKKE G SWV   + VH F AGD SH +   IYEKL+EL ++M  AGYV  T F L  +
Sbjct: 459 GVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAV 518

Query: 856 EPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
           + E K + + YHSE++A+AF ++T     PIR+MKNLRVCGDCH+A KF+SK  GR +++
Sbjct: 519 DGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIV 578

Query: 915 RDSNRFHHFNDGKCSCGDYW 934
           RD+NRFH F DGKCSCGDYW
Sbjct: 579 RDNNRFHRFEDGKCSCGDYW 598



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 178/375 (47%), Gaps = 3/375 (0%)

Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
           R+G ++H ++++ GL  +  V + L+N+Y+K      S  VF     K S +W+++IS  
Sbjct: 42  RQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAF 101

Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
            QN     A+  F  M  DG+   +    S   +C  L    +G+ +H   +K G   DV
Sbjct: 102 AQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDV 161

Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
            V ++L+ +YA  G +     +F  MPE + VSW+ +I  +A  +  V EA+  +     
Sbjct: 162 FVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGV-EALTLFKQALI 220

Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
                N  TF +++   SS +  +LG  +H   +K +  + + + +AL+S Y KCG ++ 
Sbjct: 221 EDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEG 280

Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
             ++F  +  R   + WNSM+     +    +   L   M   G + +   F +VL AC+
Sbjct: 281 AYQVFDEIPTRNLGL-WNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACS 339

Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS-WN 631
               +E+G E  +      +E +    ++LVD+  + G++  A      MP+R   S W 
Sbjct: 340 HAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWG 399

Query: 632 SMISGYARHGHGDKA 646
           ++++G   H   + A
Sbjct: 400 ALLTGCRIHKDTEMA 414



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 156/317 (49%), Gaps = 12/317 (3%)

Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNV----------VSMNGLMEGRRKGKEVHGYLIR 284
           S+++S FA+      A + F +M+   V              G +     GK VH   ++
Sbjct: 95  SSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVK 154

Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
           +G +  V VG+ LV+MYAKCG I D+R +F  M  ++ VSW+ MI G  Q     EA+  
Sbjct: 155 TGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTL 214

Query: 345 FCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
           F     + +  ++F+  S +  C+S  ++ LG+ IHG  LK+  DS   V +AL+SLY+ 
Sbjct: 215 FKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSK 274

Query: 405 AGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFIN 464
            G +    +VF  +P  +   WNS++ A A   A        + +M   G  PN + F++
Sbjct: 275 CGVIEGAYQVFDEIPTRNLGLWNSMLIACAQ-HAHTQRVFGLFEEMGNVGMKPNFIXFLS 333

Query: 465 ILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERR 524
           +L A S   + + G +  + +  Y +  ET    +L+   G+ G++ +   +  +M  R 
Sbjct: 334 VLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRP 393

Query: 525 DEVSWNSMISG-YIHNE 540
            E  W ++++G  IH +
Sbjct: 394 TESVWGALLTGCRIHKD 410



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 15/285 (5%)

Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
           N+L + +     + G Q+HA ++K+ +     + + L++ Y K        ++F   + +
Sbjct: 30  NLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDE-TPK 88

Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
           +   +W+S+IS +  NE    A+     M+  G R D   + +   AC  +   + G  V
Sbjct: 89  KSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSV 148

Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
           H   V+     DV +GS+LVDMY+KCG I  A   FD MP RNV SW+ MI GYA+   G
Sbjct: 149 HCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDG 208

Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL----E 699
            +ALTLF Q  ++    +  TF  V+  CS +  ++ G         ++GL  ++     
Sbjct: 209 VEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELG-------KLIHGLCLKMSFDSS 261

Query: 700 QF--SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
            F  S ++ L  + G ++   +  +++P T N  +W ++L AC +
Sbjct: 262 SFVGSALISLYSKCGVIEGAYQVFDEIP-TRNLGLWNSMLIACAQ 305



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 164/337 (48%), Gaps = 16/337 (4%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
            K  H   +K G+  DVF+ ++L+++Y + G++  A  LFDEMP+RN VSW+ ++ GY  
Sbjct: 145 GKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQ 204

Query: 64  KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
                EA  +FK+ +     +N +   SV+R C     +  + G  +H L LK +     
Sbjct: 205 LDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCS--SSTFLELGKLIHGLCLKMSFDSSS 262

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V + LI++Y  C    + A ++F+EI TR+L  WNS++   +Q   T  VF LF  M  
Sbjct: 263 FVGSALISLYSKC-GVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGN 321

Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
            G    +KPN   F S++ A   + L      ++  ++++  G+  +    ++LV    R
Sbjct: 322 VG----MKPNFIXFLSVLYACSHAGLVEKG--REYFSLMRDYGIEPETEHYASLVDLLGR 375

Query: 244 LGNFYYARKIFEQMIQKNVVSMNG-LMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----L 297
            G    A  + +QM  +   S+ G L+ G R  K+      +   + +M +  +G    L
Sbjct: 376 AGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLL 435

Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
            N YA  G  +++ +  R M+    V   T +S +++
Sbjct: 436 SNAYAAAGRYEEA-ARMRKMLRDRGVKKETGLSWVEE 471



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 165/354 (46%), Gaps = 35/354 (9%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H  ILK G      + + LIN+Y +      + ++FDE P ++S +W+ ++S +     
Sbjct: 47  LHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEA 106

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGF----KFGMQVHCLVLKSNQTFD 122
              A + F+ M+  G   + +   S  +AC      GF      G  VHCL +K+    D
Sbjct: 107 PLLALQFFRRMLNDGVRPDDHIYPSATKAC------GFLRRSDVGKSVHCLAVKTGYYCD 160

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             V + L+ MY  C E  D AR +F+E+  R+++SW+ +I  Y+Q  D +    LF    
Sbjct: 161 VFVGSSLVDMYAKCGEIGD-ARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLF---- 215

Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
           ++     +  N++TF S+I    SS      L + I  +  K    S  +VGSAL+S ++
Sbjct: 216 KQALIEDVDVNDFTFSSVIRVCSSSTFLE--LGKLIHGLCLKMSFDSSSFVGSALISLYS 273

Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRS-GLF-DMVAVGNG---- 296
           + G    A ++F+++  +N+   N ++    +    H +  R  GLF +M  VG      
Sbjct: 274 KCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQ----HAHTQRVFGLFEEMGNVGMKPNFI 329

Query: 297 --LVNMYA--KCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAI 342
             L  +YA    G ++  R  F  M    I  ++  + +++  L + G  +EA+
Sbjct: 330 XFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAV 383



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 161/366 (43%), Gaps = 49/366 (13%)

Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
           G+Q+H  +LK       LVS+ LI +Y S  +    + ++F+E   +   +W+S+IS ++
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLY-SKTQLPLFSLQVFDETPKKSSTTWSSVISAFA 102

Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
           Q    +   + F RM  +G R    P+++ + S   A     L  S + + +  +  K G
Sbjct: 103 QNEAPLLALQFFRRMLNDGVR----PDDHIYPSATKAC--GFLRRSDVGKSVHCLAVKTG 156

Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------ 274
              D++VGS+LV  +A+ G    AR +F++M ++NVVS +G++ G  +            
Sbjct: 157 YYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFK 216

Query: 275 -----------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
                                        GK +HG  ++        VG+ L+++Y+KCG
Sbjct: 217 QALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCG 276

Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
            I+ +  VF  +  ++   WN+M+    Q+   +     F  M   G+  +    +S L 
Sbjct: 277 VIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLY 336

Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
           +C+  G +  G++        G++ +     +L+ L   AG L   + V   MP     S
Sbjct: 337 ACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTES 396

Query: 426 -WNSVI 430
            W +++
Sbjct: 397 VWGALL 402


>gi|356534396|ref|XP_003535741.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g04780-like [Glycine max]
          Length = 632

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 221/578 (38%), Positives = 339/578 (58%), Gaps = 11/578 (1%)

Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
           L  CA  G  M G+  H + +++GL+ D+  S  L+++Y+    +    K    M     
Sbjct: 57  LQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKSL 116

Query: 424 VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVH 482
           +  N+ IGA   + A   +A+K  + M+R     N  T  ++L   + F    L   Q+H
Sbjct: 117 ILXNTRIGALTQN-AEDRKALKLLIRMQREVTPFNEFTISSVLCNCA-FKCAILECMQLH 174

Query: 483 AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
           A  IK  + +   +  ALL  Y KC  + D  ++F  M E+ + V+W+SM++GY+ N   
Sbjct: 175 AFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEK-NAVTWSSMMAGYVQNGFH 233

Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
            +A+ L       G   D F  ++ +SACA +ATL  G +VHA   ++    ++ + S+L
Sbjct: 234 DEALLLFHNAQLMGFDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVASSL 293

Query: 603 VDMYSKCGRIDYASRFFD-LMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
           +DMY+KCG I  A   F+  + VR++  WN+MISG+ARH    +A+ LF +M+  G  PD
Sbjct: 294 IDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGFFPD 353

Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
            VT+V VL+ACSH GL +EG K+F  M + + L P +  +SCM+D+LGRAG + K  + I
Sbjct: 354 DVTYVSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVQKAYDLI 413

Query: 722 NKMPITPNSLIWRTV--LGACCRANCR---KTELGRKAANMLFEMEPQNAVNYVLLANMY 776
            +M     S +W +V  L    +A+CR     E    AA  LFEMEP NA N++LLAN+Y
Sbjct: 414 GRMSFNATSSMWGSVRGLSXLIKASCRIYGNIEFAEIAAKHLFEMEPNNAGNHILLANIY 473

Query: 777 ASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELN 836
           A+  K ++VA+ARK ++E +V+KE G SW+ +K+ +H F  G+ +HP+ D  Y KL  L 
Sbjct: 474 AANKKSDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDNYAKLDNLV 533

Query: 837 QKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCG 895
            +++   Y   T   L D+E   K  L+ +HSEK+A+ F ++   +++PIRI+KNLR+CG
Sbjct: 534 VELKKLNYKVDTNNDLHDVEESRKHMLLGHHSEKLAITFGLVCLPTEIPIRIIKNLRICG 593

Query: 896 DCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
           DCH+  K +SK   REI++RD+NRFHHF DG CSCG++
Sbjct: 594 DCHTFMKLVSKFASREIIVRDTNRFHHFKDGLCSCGEF 631



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 169/349 (48%), Gaps = 5/349 (1%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           G+  H  +IR GL   +     L+NMY+KC  +  +R     M+ K  +  NT I  L Q
Sbjct: 69  GRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKSLILXNTRIGALTQ 128

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           N    +A+     M+R+    + F++ S L +CA    I+   Q+H   +K  +DS+  V
Sbjct: 129 NAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFV 188

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
             ALL +YA    +    ++F  MPE + V+W+S++  +  +     EA+  + + +  G
Sbjct: 189 XTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQN-GFHDEALLLFHNAQLMG 247

Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
           +  +     + ++A +  +    G QVHA   K    +   + ++L+  Y KCG + +  
Sbjct: 248 FDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVASSLIDMYAKCGCIREAY 307

Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
            +F    E R  V WN+MISG+  + L  +AM L   M QRG   D  T+ +VL+AC+ +
Sbjct: 308 LVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGFFPDDVTYVSVLNACSHM 367

Query: 575 ATLERGMEVHACGVRA-CLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
              E G +     VR   L   V+  S ++D+  + G +  A   +DL+
Sbjct: 368 GLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVQKA---YDLI 413



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 139/258 (53%), Gaps = 3/258 (1%)

Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
           ++H + I++ +     V   L+++YAKC +I D+  +F  M  K++V+W++M++G  QNG
Sbjct: 172 QLHAFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNG 231

Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
            ++EA++ F   +  G     F++ S +S+CA L  ++ G+Q+H    K G  S++ V++
Sbjct: 232 FHDEALLLFHNAQLMGFDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVAS 291

Query: 397 ALLSLYADAGYLSRCLKVFFLMPE-HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
           +L+ +YA  G +     VF    E    V WN++I  FA   AL  EA+  +  M++ G+
Sbjct: 292 SLIDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFA-RHALAQEAMILFEKMQQRGF 350

Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCE 514
            P+ VT++++L A S   + + G +    +++ +N++      + ++   G+ G +    
Sbjct: 351 FPDDVTYVSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVQKAY 410

Query: 515 KIFARMSERRDEVSWNSM 532
            +  RMS       W S+
Sbjct: 411 DLIGRMSFNATSSMWGSV 428



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 103/201 (51%), Gaps = 14/201 (6%)

Query: 7   FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
            H   +K     + F+   L++VY +   +  AS++F+ MP++N+V+W+ +++GY   G 
Sbjct: 173 LHAFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGF 232

Query: 67  SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
            +EA  +F      GF  + + + S + AC   G +    G QVH +  KS    +  V+
Sbjct: 233 HDEALLLFHNAQLMGFDQDPFNISSAVSAC--AGLATLVEGKQVHAMSHKSGFGSNIYVA 290

Query: 127 NVLIAMYGSCLESTDCARR---IFEE-IETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
           + LI MY  C     C R    +FE  +E R ++ WN++IS +++         LF +MQ
Sbjct: 291 SSLIDMYAKC----GCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQ 346

Query: 183 REGFRYSLKPNEYTFGSLITA 203
           + GF     P++ T+ S++ A
Sbjct: 347 QRGFF----PDDVTYVSVLNA 363



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 156/352 (44%), Gaps = 33/352 (9%)

Query: 8   HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
           H QI++ G   D+     LIN+Y +   + S  K  DEM  ++ +     +   T     
Sbjct: 73  HAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKSLILXNTRIGALTQNAED 132

Query: 68  NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFG----MQVHCLVLKSNQTFDG 123
            +A K+   M R     N + + SVL  C       FK      MQ+H   +K+    + 
Sbjct: 133 RKALKLLIRMQREVTPFNEFTISSVLCNC------AFKCAILECMQLHAFSIKAAIDSNC 186

Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
            V   L+ +Y  C    D A ++FE +  ++ ++W+S+++ Y Q G       LF   Q 
Sbjct: 187 FVXTALLHVYAKCSSIKD-ASQMFESMPEKNAVTWSSMMAGYVQNGFHDEALLLFHNAQL 245

Query: 184 EGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
            GF      + +   S ++  A  ++++ G    +Q+ AM  K+G  S++YV S+L+  +
Sbjct: 246 MGF----DQDPFNISSAVSACAGLATLVEG----KQVHAMSHKSGFGSNIYVASSLIDMY 297

Query: 242 ARLGNFYYARKIFEQMIQ-KNVVSMNGLMEGRRKGKEVHGYLI------RSGLFDMVAVG 294
           A+ G    A  +FE  ++ +++V  N ++ G  +       +I      + G F      
Sbjct: 298 AKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGFFPDDVTY 357

Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEA 341
             ++N  +  G  ++ +  F  M+ + ++S     ++ MI  L + G  ++A
Sbjct: 358 VSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVQKA 409



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 51/107 (47%)

Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
           +L  CA   +   G   HA  +R  LE D++  + L++MYSKC  +    +  D M V++
Sbjct: 56  LLQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKS 115

Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
           +   N+ I    ++    KAL L  +M+ +    +  T   VL  C+
Sbjct: 116 LILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCA 162


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 225/591 (38%), Positives = 345/591 (58%), Gaps = 15/591 (2%)

Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
           GK+ H   +++G    V VG+ L+NMY K G + D+R +F  M  +++VSW TMISG   
Sbjct: 137 GKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYAS 196

Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
           +   ++A+  F  MRR+  + + F+L S LS+  S  ++  G+Q+H   +K GL + VSV
Sbjct: 197 SDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSV 256

Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA---DSEALVSEAVKYYLDMR 451
           +NAL+++YA  G L   ++ F    + + ++W++++  +A   DS+    +A+K +  M 
Sbjct: 257 ANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSD----KALKLFNKMH 312

Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
            +G  P+  T + ++ A S       G Q+H+   K     +  + +A++  Y KCG + 
Sbjct: 313 SSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLA 372

Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
           D  K F    ++ D V W S+I+GY+ N      +NL   M       +  T A+VL AC
Sbjct: 373 DARKGF-ECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRAC 431

Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
           +S+A L++G ++HA  ++   + +V IGSAL  MY+KCG +D     F  MP R+V SWN
Sbjct: 432 SSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWN 491

Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
           +MISG +++GHG+KAL LF +M L+G  PD VTFV +LSACSH GLVD G+++FK M   
Sbjct: 492 AMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDE 551

Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
           + + P +E ++CMVD+L RAG+L++ +EFI    +     +WR +LGAC   N R  ELG
Sbjct: 552 FNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGAC--KNHRNYELG 609

Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
             A   L E+    +  YVLL+++Y + G  E+V + R+ MK   V KE GCSW+ +K  
Sbjct: 610 VYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGL 669

Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKED 862
           VHVFV GD  HP+ D I  +L+ L + M D GY P     L D  PE+  D
Sbjct: 670 VHVFVVGDNQHPQVDEIRLELELLTKLMIDEGYQP-----LLDRLPETVID 715



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 242/469 (51%), Gaps = 13/469 (2%)

Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM--IGKDSVSWNTMISG 331
           KG+ +H  ++++G    + V N  +N+YAK   +  + ++F  +    KD VSWN++I+ 
Sbjct: 29  KGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINA 88

Query: 332 LDQNGCYEEAIMNFCAMRR----DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLG 387
             QN     +       RR    + ++ +  +L    S+ ++L  ++ G+Q H   +K G
Sbjct: 89  FSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTG 148

Query: 388 LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
              DV V ++LL++Y   G++    K+F  MPE + VSW ++I  +A S+ +  +AV+ +
Sbjct: 149 CSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSD-IADKAVEVF 207

Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
             MRR     N     ++L+A +S      G QVH+  IK  +    ++ NAL++ Y KC
Sbjct: 208 ELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKC 267

Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
           G +DD  + F   S  ++ ++W++M++GY       KA+ L   M   G     FT   V
Sbjct: 268 GSLDDAVRTF-EFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGV 326

Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
           ++AC+ +  +  G ++H+   +      + + SA+VDMY+KCG +  A + F+ +   +V
Sbjct: 327 INACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDV 386

Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
             W S+I+GY ++G  +  L L+ +M+++  +P+ +T   VL ACS    +D+G K   +
Sbjct: 387 VLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQG-KQMHA 445

Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP----ITPNSLI 732
               YG   ++   S +  +  + G LD       +MP    I+ N++I
Sbjct: 446 RIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMI 494



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/383 (33%), Positives = 206/383 (53%), Gaps = 8/383 (2%)

Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
           L+  L  C     I+ G+ +H   LK G  S + V+N  L+LYA   +LS  L +F  + 
Sbjct: 14  LLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSIN 73

Query: 420 EHDQ--VSWNSVIGAFADSEALVSE--AVKYYLDMRRAG-WSPNGVTFINILAAASSFSM 474
           ++D+  VSWNS+I AF+ + +  S   A+  +  M RA    PN  T   + +AAS+ S 
Sbjct: 74  DNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSD 133

Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
              G Q H+  +K   + +  + ++LL+ Y K G + D  K+F RM E R+ VSW +MIS
Sbjct: 134 VVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPE-RNTVSWATMIS 192

Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
           GY  +++  KA+ +   M +  +  + F   +VLSA  S   +  G +VH+  ++  L  
Sbjct: 193 GYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLA 252

Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
            V + +ALV MY+KCG +D A R F+    +N  +W++M++GYA+ G  DKAL LF++M 
Sbjct: 253 IVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMH 312

Query: 655 LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGEL 714
             G LP   T VGV++ACS    V EG K   S +   G   QL   S +VD+  + G L
Sbjct: 313 SSGVLPSEFTLVGVINACSDLCAVVEG-KQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSL 371

Query: 715 DKIEEFINKMPITPNSLIWRTVL 737
               +    +   P+ ++W +++
Sbjct: 372 ADARKGFECVQ-QPDVVLWTSII 393



 Score =  193 bits (491), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 141/560 (25%), Positives = 271/560 (48%), Gaps = 58/560 (10%)

Query: 4   AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPD--RNSVSWACIVSGY 61
            +  H +ILK G    +++ NT +N+Y +   L+ A  LFD + D  ++ VSW  +++ +
Sbjct: 30  GRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAF 89

Query: 62  THKGMSNE---ACKMFKEMVRAGFLL-NRYALGSVLRACQECGPSGFKFGMQVHCLVLKS 117
           +    S+    A  +F+ M+RA  ++ N + L  V  A      S    G Q H + +K+
Sbjct: 90  SQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNL--SDVVAGKQAHSVAVKT 147

Query: 118 NQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKL 177
             + D  V + L+ MY       D AR++F+ +  R+ +SW ++IS Y+         ++
Sbjct: 148 GCSGDVYVGSSLLNMYCKTGFVFD-ARKLFDRMPERNTVSWATMISGYASSDIADKAVEV 206

Query: 178 FSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSAL 237
           F  M+RE        NE+   S+++A  S V    Y  +Q+ ++  K GLL+ + V +AL
Sbjct: 207 FELMRRE----EEIQNEFALTSVLSALTSDVFV--YTGRQVHSLAIKNGLLAIVSVANAL 260

Query: 238 VSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG---------------------- 275
           V+ +A+ G+   A + FE    KN ++ + ++ G  +G                      
Sbjct: 261 VTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSE 320

Query: 276 -------------------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
                              K++H +  + G    + V + +V+MYAKCG++ D+R  F  
Sbjct: 321 FTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFEC 380

Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
           +   D V W ++I+G  QNG YE  +  +  M+ + ++ +  ++ S L +C+SL  +  G
Sbjct: 381 VQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQG 440

Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
           +Q+H   +K G   +V + +AL ++Y   G L     +F+ MP  D +SWN++I   + +
Sbjct: 441 KQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQN 500

Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANETT 495
               ++A++ +  M   G  P+ VTF+N+L+A S   +   G +    +  ++N+A    
Sbjct: 501 -GHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVE 559

Query: 496 IENALLSCYGKCGEMDDCEK 515
               ++    + G++++ ++
Sbjct: 560 HYACMVDILSRAGKLNEAKE 579



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 7/201 (3%)

Query: 3   DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
           + K  H    K GF   +++ + ++++Y + G LA A K F+ +   + V W  I++GY 
Sbjct: 338 EGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYV 397

Query: 63  HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
             G       ++ +M     + N   + SVLRAC     +    G Q+H  ++K     +
Sbjct: 398 QNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSL--AALDQGKQMHARIIKYGFKLE 455

Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
             + + L AMY  C  S D    IF  + +RD+ISWN++IS  SQ G      +LF +M 
Sbjct: 456 VPIGSALSAMYTKC-GSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKML 514

Query: 183 REGFRYSLKPNEYTFGSLITA 203
            EG    +KP+  TF +L++A
Sbjct: 515 LEG----IKPDPVTFVNLLSA 531


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.136    0.413 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,069,668,420
Number of Sequences: 23463169
Number of extensions: 568560942
Number of successful extensions: 1556331
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8121
Number of HSP's successfully gapped in prelim test: 3301
Number of HSP's that attempted gapping in prelim test: 1268875
Number of HSP's gapped (non-prelim): 88687
length of query: 934
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 782
effective length of database: 8,792,793,679
effective search space: 6875964656978
effective search space used: 6875964656978
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 82 (36.2 bits)