BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046194
(934 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 1269 bits (3285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/980 (63%), Positives = 750/980 (76%), Gaps = 53/980 (5%)
Query: 4 AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
A+ FH ++ K+ DV+LCN LIN Y+ GD SA K+FDEMP RN VSWACIVSGY+
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 64 KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
G EA ++MV+ G N+YA SVLRACQE G G FG Q+H L+ K + D
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
+VSNVLI+MY C+ S A F +IE ++ +SWNSIISVYSQ GD S F++FS MQ
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
+G R P EYTFGSL+T A S LL+QI+ ++K+GLL+DL+VGS LVS FA+
Sbjct: 200 DGSR----PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAK 255
Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------------- 272
G+ YARK+F QM +N V++NGLM G
Sbjct: 256 SGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILL 315
Query: 273 --------------RKGKEVHGYLIRSGLFD-MVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
+KG+EVHG++I +GL D MV +GNGLVNMYAKCG+I D+R VF FM
Sbjct: 316 SSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM 375
Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
KDSVSWN+MI+GLDQNGC+ EA+ + +MRR ++ +F+LIS+LSSCASL W LGQ
Sbjct: 376 TDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435
Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSE 437
QIHGE LKLG+D +VSVSNAL++LYA+ GYL+ C K+F MPEHDQVSWNS+IGA A SE
Sbjct: 436 QIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSE 495
Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
+ EAV +L+ +RAG N +TF ++L+A SS S G+LG Q+H +K N+A+E T E
Sbjct: 496 RSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTE 555
Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ 557
NAL++CYGKCGEMD CEKIF+RM+ERRD V+WNSMISGYIHNELL KA++LVWFM+Q GQ
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQ 615
Query: 558 RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
RLD F +ATVLSA ASVATLERGMEVHAC VRACLE DVV+GSALVDMYSKCGR+DYA R
Sbjct: 616 RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALR 675
Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAG 676
FF+ MPVRN YSWNSMISGYARHG G++AL LF MKLDG PDHVTFVGVLSACSHAG
Sbjct: 676 FFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735
Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
L++EGFKHF+SMS YGL P++E FSCM D+LGRAGELDK+E+FI KMP+ PN LIWRTV
Sbjct: 736 LLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTV 795
Query: 737 LGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAE 796
LGACCRAN RK ELG+KAA MLF++EP+NAVNYVLL NMYA+GG+WED+ KARK MK+A+
Sbjct: 796 LGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDAD 855
Query: 797 VKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLE 856
VKKEAG SWVTMKDGVH+FVAGD+SHP+ D+IY+KLKELN+KMRDAGYVPQT FAL+DLE
Sbjct: 856 VKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLE 915
Query: 857 PESKEDLVSYHSEKIAVAFVLT--RNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVL 914
E+KE+++SYHSEK+AVAFVL R+S LPIRIMKNLRVCGDCHSAFK+ISKI GR+I+L
Sbjct: 916 QENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIIL 975
Query: 915 RDSNRFHHFNDGKCSCGDYW 934
RDSNRFHHF DG CSC D+W
Sbjct: 976 RDSNRFHHFQDGACSCSDFW 995
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 139/519 (26%), Positives = 227/519 (43%), Gaps = 61/519 (11%)
Query: 2 KDAKLFHLQILKHGFA-YDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
K + H ++ G + V + N L+N+Y + G +A A ++F M D++SVSW +++G
Sbjct: 330 KKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITG 389
Query: 61 YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
G EA + +K M R L + L S L +C + K G Q+H LK
Sbjct: 390 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA--KLGQQIHGESLKLGID 447
Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTI-SVFKLFS 179
+ VSN L+ +Y +C R+IF + D +SWNSII ++ ++ F
Sbjct: 448 LNVSVSNALMTLYAETGYLNEC-RKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFL 506
Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
QR G K N TF S+++A S L +QI + K + + +AL++
Sbjct: 507 NAQRAG----QKLNRITFSSVLSAVSSLSF--GELGKQIHGLALKNNIADEATTENALIA 560
Query: 240 GFARLGNFYYARKIFEQMIQ-KNVVSMNGLMEGR-------------------------- 272
+ + G KIF +M + ++ V+ N ++ G
Sbjct: 561 CYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSF 620
Query: 273 ---------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
+G EVH +R+ L V VG+ LV+MY+KCG +D + F M
Sbjct: 621 MYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTM 680
Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLG 376
++S SWN+MISG ++G EEA+ F M+ DG + + + LS+C+ G + G
Sbjct: 681 PVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEG 740
Query: 377 QQIHGEGL--KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV-SWNSVIGAF 433
+ H E + GL + + + + AG L + MP V W +V+GA
Sbjct: 741 FK-HFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC 799
Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFI---NILAAA 469
+ +E K +M N V ++ N+ AA
Sbjct: 800 CRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAG 838
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 127/272 (46%), Gaps = 9/272 (3%)
Query: 1 SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
+K + H + LK G +V + N L+ +Y G L K+F MP+ + VSW I+
Sbjct: 431 AKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGA 490
Query: 61 YTHKGMS-NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
S EA F RAG LNR SVL A + G Q+H L LK+N
Sbjct: 491 LARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFG--ELGKQIHGLALKNNI 548
Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
+ N LIA YG C E C + E RD ++WNS+IS Y L
Sbjct: 549 ADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVW 608
Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
M + G R + + + ++++ A++SV + + ++ A +A L SD+ VGSALV
Sbjct: 609 FMLQTGQRL----DSFMYATVLS-AFASVATLERGM-EVHACSVRACLESDVVVGSALVD 662
Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
+++ G YA + F M +N S N ++ G
Sbjct: 663 MYSKCGRLDYALRFFNTMPVRNSYSWNSMISG 694
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 561 bits (1447), Expect = e-159, Method: Compositional matrix adjust.
Identities = 337/954 (35%), Positives = 517/954 (54%), Gaps = 46/954 (4%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
K H +IL + FL N LI++Y + G L A ++FD+MPDR+ VSW I++ Y
Sbjct: 59 KCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQS 118
Query: 65 GMS-----NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQ-VHCLVLKSN 118
+A +F+ + + +R L +L+ C SG+ + + H K
Sbjct: 119 SECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLH---SGYVWASESFHGYACKIG 175
Query: 119 QTFDGLVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVF 175
D V+ L+ +Y G E + +FEE+ RD++ WN ++ Y + G
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKE----GKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 231
Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS 235
L S G L PNE T L + +G + A A +S++ +
Sbjct: 232 DLSSAFHSSG----LNPNEITLRLLARISGDDSDAGQV---KSFANGNDASSVSEIIFRN 284
Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNV----VSMNGLMEGRRK------GKEVHGYLIRS 285
+S + G + K F M++ +V V+ ++ K G++VH ++
Sbjct: 285 KGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKL 344
Query: 286 GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNF 345
GL M+ V N L+NMY K +R+VF M +D +SWN++I+G+ QNG EA+ F
Sbjct: 345 GLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404
Query: 346 CAMRRDGLMSSNFSLISTLSSCASLG-WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYAD 404
+ R GL +++ S L + +SL + L +Q+H +K+ SD VS AL+ Y+
Sbjct: 405 MQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR 464
Query: 405 AGYLSRCLK---VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
+RC+K + F D V+WN+++ + S + +K + M + G + T
Sbjct: 465 ----NRCMKEAEILFERHNFDLVAWNAMMAGYTQSHD-GHKTLKLFALMHKQGERSDDFT 519
Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
+ G QVHA IK + + + +L Y KCG+M + F +
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
D+V+W +MISG I N +A ++ M G D FT AT+ A + + LE+G
Sbjct: 580 -VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGR 638
Query: 582 EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
++HA ++ D +G++LVDMY+KCG ID A F + + N+ +WN+M+ G A+HG
Sbjct: 639 QIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHG 698
Query: 642 HGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQF 701
G + L LF QMK G PD VTF+GVLSACSH+GLV E +KH +SM YG+ P++E +
Sbjct: 699 EGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHY 758
Query: 702 SCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM 761
SC+ D LGRAG + + E I M + ++ ++RT+L AC TE G++ A L E+
Sbjct: 759 SCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQG--DTETGKRVATKLLEL 816
Query: 762 EPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDES 821
EP ++ YVLL+NMYA+ KW+++ AR MK +VKK+ G SW+ +K+ +H+FV D S
Sbjct: 817 EPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRS 876
Query: 822 HPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRN 880
+ + +LIY K+K++ + ++ GYVP+T F L D+E E KE + YHSEK+AVAF +L+
Sbjct: 877 NRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTP 936
Query: 881 SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
PIR++KNLRVCGDCH+A K+I+K+ REIVLRD+NRFH F DG CSCGDYW
Sbjct: 937 PSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 5/180 (2%)
Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
+MLG+ H L + + + N L+S+Y+ G L+ +VF MP+ D VSWNS++ A
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 433 FADSEALVSEAVK----YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKY 488
+A S V E ++ + +R+ + +T +L H K
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 489 NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNL 548
+ + + AL++ Y K G++ + + +F M RD V WN M+ Y+ +A++L
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP-YRDVVLWNLMLKAYLEMGFKEEAIDL 233
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%)
Query: 2 KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
+ + H LK D F+ +L+++Y + G + A LF + N +W ++ G
Sbjct: 635 EQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL 694
Query: 62 THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
G E ++FK+M G ++ VL AC G
Sbjct: 695 AQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSG 733
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 558 bits (1439), Expect = e-158, Method: Compositional matrix adjust.
Identities = 320/974 (32%), Positives = 512/974 (52%), Gaps = 54/974 (5%)
Query: 3 DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
+ + H QILK G + L L + Y+ GDL A K+FDEMP+R +W ++
Sbjct: 103 EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELA 162
Query: 63 HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
+ + E +F MV N VL AC+ G F Q+H +L
Sbjct: 163 SRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR-GGSVAFDVVEQIHARILYQGLRDS 221
Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
+V N LI +Y S D ARR+F+ + +D SW ++IS S+ +LF M
Sbjct: 222 TVVCNPLIDLY-SRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM- 279
Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
+ + P Y F S+++A + + +Q+ +V K G SD YV +ALVS +
Sbjct: 280 ---YVLGIMPTPYAFSSVLSACKK--IESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF 334
Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG--------------RR--------------- 273
LGN A IF M Q++ V+ N L+ G +R
Sbjct: 335 HLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLAS 394
Query: 274 ------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
+G+++H Y + G + L+N+YAKC I+ + F ++
Sbjct: 395 LVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVEN 454
Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHG 381
V WN M+ + F M+ + ++ + ++ S L +C LG + LG+QIH
Sbjct: 455 VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHS 514
Query: 382 EGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVS 441
+ +K + V + L+ +YA G L + D VSW ++I +
Sbjct: 515 QIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN-FDD 573
Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALL 501
+A+ + M G + V N ++A + K G Q+HAQ +++ +NAL+
Sbjct: 574 KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 633
Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
+ Y +CG++++ F + +E D ++WN+++SG+ + +A+ + M + G ++
Sbjct: 634 TLYSRCGKIEESYLAFEQ-TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNN 692
Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
FTF + + A + A +++G +VHA + + + + +AL+ MY+KCG I A + F
Sbjct: 693 FTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE 752
Query: 622 MPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
+ +N SWN++I+ Y++HG G +AL F QM P+HVT VGVLSACSH GLVD+G
Sbjct: 753 VSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 812
Query: 682 FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACC 741
+F+SM+ YGL P+ E + C+VD+L RAG L + +EFI +MPI P++L+WRT+L AC
Sbjct: 813 IAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACV 872
Query: 742 RANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEA 801
+ E+G AA+ L E+EP+++ YVLL+N+YA KW+ R+ MKE VKKE
Sbjct: 873 VH--KNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEP 930
Query: 802 GCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKE 861
G SW+ +K+ +H F GD++HP D I+E ++L ++ + GYV L +L+ E K+
Sbjct: 931 GQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKD 990
Query: 862 DLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRF 920
++ HSEK+A++F +L+ + +PI +MKNLRVC DCH+ KF+SK+ REI++RD+ RF
Sbjct: 991 PIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRF 1050
Query: 921 HHFNDGKCSCGDYW 934
HHF G CSC DYW
Sbjct: 1051 HHFEGGACSCKDYW 1064
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 25/246 (10%)
Query: 2 KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
K+ + H Q GF+ D+ N L+ +Y R G + + F++ ++++W +VSG+
Sbjct: 608 KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 667
Query: 62 THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
G + EA ++F M R G N + GS ++A E + K G QVH ++ K+
Sbjct: 668 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET--ANMKQGKQVHAVITKTGYDS 725
Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
+ V N LI+MY C +D A + F E+ T++ +SWN+II+ YS+ G F +M
Sbjct: 726 ETEVCNALISMYAKCGSISD-AEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM 784
Query: 182 QREGFRYSLKPNEYTFGSLITA-----------AYSSVLSGSYLLQQ-------ILAMVK 223
+++PN T +++A AY ++ Y L ++ M+
Sbjct: 785 ----IHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLT 840
Query: 224 KAGLLS 229
+AGLLS
Sbjct: 841 RAGLLS 846
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 2/193 (1%)
Query: 555 RGQRLDHFTFATVLSACASV-ATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID 613
RG R +H T +L C +L+ G ++H+ ++ L+ + + L D Y G +
Sbjct: 78 RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLY 137
Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
A + FD MP R +++WN MI A + LF +M + P+ TF GVL AC
Sbjct: 138 GAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR 197
Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
+ + + + GL + ++DL R G +D + + + +S W
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS-SW 256
Query: 734 RTVLGACCRANCR 746
++ + C
Sbjct: 257 VAMISGLSKNECE 269
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 534 bits (1376), Expect = e-150, Method: Compositional matrix adjust.
Identities = 309/837 (36%), Positives = 472/837 (56%), Gaps = 59/837 (7%)
Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
A +F++ RD S+ S++ +S+ G T +LF + R G F S++
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS----IFSSVLK 101
Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
S+ L +Q+ K G L D+ VG++LV + + NF RK+F++M ++NV
Sbjct: 102 V--SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159
Query: 263 VSMNGLMEGRRK-----------------------------------------GKEVHGY 281
V+ L+ G + G +VH
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 219
Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
++++GL + V N L+N+Y KCG + +R +F K V+WN+MISG NG EA
Sbjct: 220 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 279
Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
+ F +MR + + S S S + CA+L + +Q+H +K G D ++ AL+
Sbjct: 280 LGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVA 339
Query: 402 YADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
Y+ + L++F + + VSW ++I F ++ EAV + +M+R G PN
Sbjct: 340 YSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDG-KEEAVDLFSEMKRKGVRPNEF 398
Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
T+ IL A S +VHAQV+K N +T+ ALL Y K G++++ K+F+ +
Sbjct: 399 TYSVILTALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGI 454
Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV-ATLER 579
++ D V+W++M++GY A+ + + + G + + FTF+++L+ CA+ A++ +
Sbjct: 455 DDK-DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ 513
Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
G + H +++ L+ + + SAL+ MY+K G I+ A F +++ SWNSMISGYA+
Sbjct: 514 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQ 573
Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
HG KAL +F +MK D VTF+GV +AC+HAGLV+EG K+F M + + P E
Sbjct: 574 HGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKE 633
Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
SCMVDL RAG+L+K + I MP S IWRT+L A CR + +KTELGR AA +
Sbjct: 634 HNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAA-CRVH-KKTELGRLAAEKII 691
Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
M+P+++ YVLL+NMYA G W++ AK RK M E VKKE G SW+ +K+ + F+AGD
Sbjct: 692 AMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGD 751
Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR 879
SHP KD IY KL++L+ +++D GY P T + L D++ E KE +++ HSE++A+AF L
Sbjct: 752 RSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIA 811
Query: 880 NSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF-NDGKCSCGDYW 934
K P+ I+KNLRVCGDCH K I+KI REIV+RDSNRFHHF +DG CSCGD+W
Sbjct: 812 TPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 241 bits (615), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 180/639 (28%), Positives = 311/639 (48%), Gaps = 73/639 (11%)
Query: 36 LASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRA 95
L +A LFD+ P R+ S+ ++ G++ G + EA ++F + R G ++ SVL+
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 96 ----CQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE 151
C E FG Q+HC +K D V L+ Y D R++F+E++
Sbjct: 103 SATLCDEL------FGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD-GRKVFDEMK 155
Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
R++++W ++IS Y++ V LF RMQ EG +PN +TF + + + G
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG----TQPNSFTFAAALGVLAEEGVGG 211
Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
L Q+ +V K GL + V ++L++ + + GN AR +F++ K+VV+ N ++ G
Sbjct: 212 RGL--QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 272 R-----------------------------------------RKGKEVHGYLIRSG-LFD 289
R +++H +++ G LFD
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD 329
Query: 290 MVAVGNGLVNMYAKCGTIDDSRSVFRFM--IGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
+ L+ Y+KC + D+ +F+ + +G + VSW MISG QN EEA+ F
Sbjct: 330 Q-NIRTALMVAYSKCTAMLDALRLFKEIGCVG-NVVSWTAMISGFLQNDGKEEAVDLFSE 387
Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
M+R G+ + F+ L++ ++ ++H + +K + +V ALL Y G
Sbjct: 388 MKRKGVRPNEFTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGK 443
Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL- 466
+ KVF + + D V+W++++ +A + A+K + ++ + G PN TF +IL
Sbjct: 444 VEEAAKVFSGIDDKDIVAWSAMLAGYAQT-GETEAAIKMFGELTKGGIKPNEFTFSSILN 502
Query: 467 -AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRD 525
AA++ SMG+ G Q H IK + + + +ALL+ Y K G ++ E++F R E +D
Sbjct: 503 VCAATNASMGQ-GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE-KD 560
Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
VSWNSMISGY + KA+++ M +R ++D TF V +AC +E G +
Sbjct: 561 LVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFD 620
Query: 586 CGVRAC-LEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
VR C + S +VD+YS+ G+++ A + + MP
Sbjct: 621 IMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP 659
Score = 219 bits (559), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 155/571 (27%), Positives = 271/571 (47%), Gaps = 50/571 (8%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
+ H Q +K GF DV + +L++ Y++ + K+FDEM +RN V+W ++SGY
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 65 GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
M++E +F M G N + + L E G G G+QVH +V+K+
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG--RGLQVHTVVVKNGLDKTIP 230
Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
VSN LI +Y C + AR +F++ E + +++WNS+IS Y+ G + +F M+
Sbjct: 231 VSNSLINLYLKC-GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLN 289
Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
R S E +F S+I + L +Q+ V K G L D + +AL+ +++
Sbjct: 290 YVRLS----ESSFASVIKLCAN--LKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKC 343
Query: 245 GNFYYARKIFEQM-IQKNVVSMNGLMEG-----------------RRKG----------- 275
A ++F+++ NVVS ++ G +RKG
Sbjct: 344 TAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVI 403
Query: 276 ---------KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
EVH ++++ VG L++ Y K G ++++ VF + KD V+W+
Sbjct: 404 LTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWS 463
Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM-LGQQIHGEGLK 385
M++G Q G E AI F + + G+ + F+ S L+ CA+ M G+Q HG +K
Sbjct: 464 AMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK 523
Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
LDS + VS+ALL++YA G + +VF E D VSWNS+I +A +A+
Sbjct: 524 SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYA-QHGQAMKALD 582
Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCY 504
+ +M++ +GVTFI + AA + + + G + +++ +A + ++ Y
Sbjct: 583 VFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLY 642
Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
+ G+++ K+ M W ++++
Sbjct: 643 SRAGQLEKAMKVIENMPNPAGSTIWRTILAA 673
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 153/556 (27%), Positives = 261/556 (46%), Gaps = 47/556 (8%)
Query: 294 GNGLVNMYAKC-GTIDDSR-----SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCA 347
NG+ + C GT+ SR ++F G+D S+ +++ G ++G +EA F
Sbjct: 24 ANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLN 83
Query: 348 MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
+ R G+ S L A+L + G+Q+H + +K G DVSV +L+ Y
Sbjct: 84 IHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSN 143
Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
KVF M E + V+W ++I +A + ++ E + ++ M+ G PN TF L
Sbjct: 144 FKDGRKVFDEMKERNVVTWTTLISGYARN-SMNDEVLTLFMRMQNEGTQPNSFTFAAALG 202
Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
+ +G G QVH V+K + + N+L++ Y KCG + +F + +E + V
Sbjct: 203 VLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDK-TEVKSVV 261
Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
+WNSMISGY N L +A+ + + M RL +FA+V+ CA++ L ++H
Sbjct: 262 TWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSV 321
Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFF-DLMPVRNVYSWNSMISGYARHGHGDKA 646
V+ FD I +AL+ YSKC + A R F ++ V NV SW +MISG+ ++ ++A
Sbjct: 322 VKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEA 381
Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACS-------HAGLVDEGFKHFKSMS----QVYGLI 695
+ LFS+MK G P+ T+ +L+A HA +V ++ ++ Y +
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKL 441
Query: 696 PQLEQ---------------FSCMVDLLGRAGELD-KIEEF--INKMPITPNSLIWRTVL 737
++E+ +S M+ + GE + I+ F + K I PN + ++L
Sbjct: 442 GKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSIL 501
Query: 738 GACCRANCRKTELGRKAANMLFE--MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEA 795
C N + G++ + ++ V+ LL MYA G E + K +E
Sbjct: 502 NVCAATNASMGQ-GKQFHGFAIKSRLDSSLCVSSALL-TMYAKKGNIESAEEVFKRQREK 559
Query: 796 EVKKEAGCSWVTMKDG 811
++ SW +M G
Sbjct: 560 DL-----VSWNSMISG 570
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 515 bits (1326), Expect = e-145, Method: Compositional matrix adjust.
Identities = 312/824 (37%), Positives = 464/824 (56%), Gaps = 60/824 (7%)
Query: 131 AMYGSCLESTDC-------ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
++ SC+ + D AR I +IE D + +NS+IS+YS+ GD+ +F M+R
Sbjct: 67 SLLKSCIRARDFRLGKLVHARLIEFDIEP-DSVLYNSLISLYSKSGDSAKAEDVFETMRR 125
Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVK--KAGLLSDLYVGSALVSGF 241
G R + S + A Y + L I V+ + GL+ + Y +A++
Sbjct: 126 FGKR------DVVSWSAMMACYGN---NGRELDAIKVFVEFLELGLVPNDYCYTAVIRAC 176
Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNM 300
+ + V + G+ G+L+++G F+ V VG L++M
Sbjct: 177 S----------------NSDFVGV---------GRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 301 YAKC-GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS 359
+ K + +++ VF M + V+W MI+ Q G EAI F M G S F+
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271
Query: 360 LISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADA---GYLSRCLKVFF 416
L S S+CA L + LG+Q+H ++ GL DV S L+ +YA G + C KVF
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCRKVFD 329
Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW-SPNGVTFINILAAASSFSMG 475
M +H +SW ++I + + L +EA+ + +M G PN TF + A + S
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
++G QV Q K +A+ +++ N+++S + K M+D ++ F +SE+ + VS+N+ + G
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLDG 448
Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
N +A L+ + +R + FTFA++LS A+V ++ +G ++H+ V+ L +
Sbjct: 449 TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCN 508
Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
+ +AL+ MYSKCG ID ASR F+ M RNV SW SMI+G+A+HG + L F+QM
Sbjct: 509 QPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIE 568
Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD 715
+G P+ VT+V +LSACSH GLV EG++HF SM + + + P++E ++CMVDLL RAG L
Sbjct: 569 EGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLT 628
Query: 716 KIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANM 775
EFIN MP + L+WRT LGA CR + TELG+ AA + E++P Y+ L+N+
Sbjct: 629 DAFEFINTMPFQADVLVWRTFLGA-CRVH-SNTELGKLAARKILELDPNEPAAYIQLSNI 686
Query: 776 YASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKEL 835
YA GKWE+ + R+ MKE + KE GCSW+ + D +H F GD +HP IY++L L
Sbjct: 687 YACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRL 746
Query: 836 NQKMRDAGYVPQTKFALFDLEPESKED----LVSYHSEKIAVAFVLTRNSK-LPIRIMKN 890
+++ GYVP T L LE E+ E L+ HSEKIAVAF L SK P+R+ KN
Sbjct: 747 ITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKN 806
Query: 891 LRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
LRVCGDCH+A K+IS + GREIVLRD NRFHHF DGKCSC DYW
Sbjct: 807 LRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 173 bits (438), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 225/477 (47%), Gaps = 71/477 (14%)
Query: 11 ILKHG-FAYDVFLCNTLINVYVR-VGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSN 68
++K G F DV + +LI+++V+ +A K+FD+M + N V+W +++ G
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251
Query: 69 EACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNV 128
EA + F +MV +GF +++ L SV AC E G Q+H ++S GLV +V
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAEL--ENLSLGKQLHSWAIRS-----GLVDDV 304
Query: 129 ---LIAMYGSCLE--STDCARRIFEEIETRDLISWNSIISVYSQRGD-TISVFKLFSRMQ 182
L+ MY C S D R++F+ +E ++SW ++I+ Y + + LFS M
Sbjct: 305 ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMI 364
Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
+G ++PN +TF S A + LS + +Q+L K GL S+ V ++++S F
Sbjct: 365 TQG---HVEPNHFTFSSAFKACGN--LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFV 419
Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------------ 272
+ A++ FE + +KN+VS N ++G
Sbjct: 420 KSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFAS 479
Query: 273 -----------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
RKG+++H +++ GL V N L++MY+KCG+ID + VF FM ++
Sbjct: 480 LLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRN 539
Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCA-----SLGWIMLG 376
+SW +MI+G ++G + F M +G+ + + ++ LS+C+ S GW
Sbjct: 540 VISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFN 599
Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
+K ++ ++ L AG L+ + MP + D + W + +GA
Sbjct: 600 SMYEDHKIKPKMEHYA----CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 138/516 (26%), Positives = 240/516 (46%), Gaps = 61/516 (11%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP---DRNSVSWACIVSGY 61
KL H ++++ D L N+LI++Y + GD A A +F+ M R+ VSW+ +++ Y
Sbjct: 82 KLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACY 141
Query: 62 THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ-T 120
+ G +A K+F E + G + N Y +V+RAC G G ++K+
Sbjct: 142 GNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG--VGRVTLGFLMKTGHFE 199
Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
D V LI M+ S + A ++F+++ ++++W +I+ Q G + F
Sbjct: 200 SDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLD 259
Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
M GF + +++T S+ +A + L L +Q+ + ++GL+ D V +LV
Sbjct: 260 MVLSGF----ESDKFTLSSVFSAC--AELENLSLGKQLHSWAIRSGLVDD--VECSLVDM 311
Query: 241 FARL---GNFYYARKIFEQMIQKNVVSMNGLMEG-------------------------- 271
+A+ G+ RK+F++M +V+S L+ G
Sbjct: 312 YAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEP 371
Query: 272 -----------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF 314
R GK+V G + GL +V N +++M+ K ++D++ F
Sbjct: 372 NHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAF 431
Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
+ K+ VS+NT + G +N +E+A + L S F+ S LS A++G I
Sbjct: 432 ESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIR 491
Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
G+QIH + +KLGL + V NAL+S+Y+ G + +VF M + +SW S+I FA
Sbjct: 492 KGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFA 551
Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
++ + M G PN VT++ IL+A S
Sbjct: 552 -KHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 586
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 55/99 (55%)
Query: 2 KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
+ + H Q++K G + + +CN LI++Y + G + +AS++F+ M +RN +SW +++G+
Sbjct: 491 RKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGF 550
Query: 62 THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
G + + F +M+ G N ++L AC G
Sbjct: 551 AKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 589
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 274/684 (40%), Positives = 403/684 (58%), Gaps = 16/684 (2%)
Query: 257 MIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA---VGNGLVNMYAKCGTIDDSRSV 313
++ KN +S + + R G+ VH ++++ D + N L+NMY+K + +R V
Sbjct: 11 LLLKNAISASSM----RLGRVVHARIVKT--LDSPPPPFLANYLINMYSKLDHPESARLV 64
Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
R ++ VSW ++ISGL QNG + A++ F MRR+G++ ++F+ + ASL
Sbjct: 65 LRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLP 124
Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
+ G+QIH +K G DV V + +Y K+F +PE + +WN+ I
Sbjct: 125 VTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISN- 183
Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE 493
+ ++ EA++ +++ RR PN +TF L A S + LG Q+H V++ +
Sbjct: 184 SVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTD 243
Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM 553
++ N L+ YGKC ++ E IF M + + VSW S+++ Y+ N KA L
Sbjct: 244 VSVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAAYVQNHEDEKASVLYLRSR 302
Query: 554 QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID 613
+ F ++VLSACA +A LE G +HA V+AC+E + +GSALVDMY KCG I+
Sbjct: 303 KDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIE 362
Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG--PLPDHVTFVGVLSA 671
+ + FD MP +N+ + NS+I GYA G D AL LF +M G P P+++TFV +LSA
Sbjct: 363 DSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSA 422
Query: 672 CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
CS AG V+ G K F SM YG+ P E +SC+VD+LGRAG +++ EFI KMPI P
Sbjct: 423 CSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTIS 482
Query: 732 IWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKA 791
+W + AC K +LG AA LF+++P+++ N+VLL+N +A+ G+W + R+
Sbjct: 483 VWGALQNACRMHG--KPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREE 540
Query: 792 MKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFA 851
+K +KK AG SW+T+K+ VH F A D SH I L +L +M AGY P K +
Sbjct: 541 LKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLS 600
Query: 852 LFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGR 910
L+DLE E K VS+HSEK+A+AF +L+ +PIRI KNLR+CGDCHS FKF+S V R
Sbjct: 601 LYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKR 660
Query: 911 EIVLRDSNRFHHFNDGKCSCGDYW 934
EI++RD+NRFH F DG CSC DYW
Sbjct: 661 EIIVRDNNRFHRFKDGICSCKDYW 684
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 127/505 (25%), Positives = 205/505 (40%), Gaps = 67/505 (13%)
Query: 21 FLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRA 80
FL N LIN+Y ++ SA + P RN VSW ++SG G + A F EM R
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102
Query: 81 GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST 140
G + N + +A G Q+H L +K + D V MY
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLP--VTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRD 160
Query: 141 DCARRIFEEIETRDLISWNSIISVYSQRG---DTISVFKLFSRMQREGFRYSLKPNEYTF 197
D AR++F+EI R+L +WN+ IS G + I F F R+ PN TF
Sbjct: 161 D-ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGH-------PNSITF 212
Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
+ + A + L Q+ +V ++G +D+ V + L+ + + + IF +M
Sbjct: 213 CAFLNACSDWLHLN--LGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM 270
Query: 258 IQKNVVSMNGL-----------------------------------------MEGRRKGK 276
KN VS L M G G+
Sbjct: 271 GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGR 330
Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
+H + +++ + + VG+ LV+MY KCG I+DS F M K+ V+ N++I G G
Sbjct: 331 SIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQG 390
Query: 337 CYEEAIMNFCAM--RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL-GLDSDVS 393
+ A+ F M R G + + +S LS+C+ G + G +I G++
Sbjct: 391 QVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAE 450
Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGAF----ADSEALVSEAVKYYL 448
+ ++ + AG + R + MP +S W ++ A L++ + L
Sbjct: 451 HYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKL 510
Query: 449 DMRRAGWSPNGVTFINILAAASSFS 473
D + +G N V N AAA ++
Sbjct: 511 DPKDSG---NHVLLSNTFAAAGRWA 532
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 132/267 (49%), Gaps = 9/267 (3%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
K H +K G DVF+ + ++Y + A KLFDE+P+RN +W +S
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 65 GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
G EA + F E R N + L AC + GMQ+H LVL+S D
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW--LHLNLGMQLHGLVLRSGFDTDVS 245
Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
V N LI YG C + + IF E+ T++ +SW S+++ Y Q + L+ R +++
Sbjct: 246 VCNGLIDFYGKC-KQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKD 304
Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
++ +++ S+++A ++G L + I A KA + ++VGSALV + +
Sbjct: 305 ----IVETSDFMISSVLSACAG--MAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKC 358
Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEG 271
G + + F++M +KN+V+ N L+ G
Sbjct: 359 GCIEDSEQAFDEMPEKNLVTRNSLIGG 385
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 144/317 (45%), Gaps = 20/317 (6%)
Query: 7 FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
H +L+ GF DV +CN LI+ Y + + S+ +F EM +N+VSW +V+ Y
Sbjct: 231 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 290
Query: 67 SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
+A ++ + + + + SVL AC G +G + G +H +K+ V
Sbjct: 291 DEKASVLYLRSRKDIVETSDFMISSVLSAC--AGMAGLELGRSIHAHAVKACVERTIFVG 348
Query: 127 NVLIAMYGS--CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
+ L+ MYG C+E ++ A F+E+ ++L++ NS+I Y+ +G LF M
Sbjct: 349 SALVDMYGKCGCIEDSEQA---FDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPR 405
Query: 185 GFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
G PN TF SL++A +V +G + +M G+ S +V
Sbjct: 406 G--CGPTPNYMTFVSLLSACSRAGAVENGMKIFD---SMRSTYGIEPGAEHYSCIVDMLG 460
Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG---- 296
R G A + ++M + +S+ G ++ R GK G L LF + +G
Sbjct: 461 RAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVL 520
Query: 297 LVNMYAKCGTIDDSRSV 313
L N +A G ++ +V
Sbjct: 521 LSNTFAAAGRWAEANTV 537
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust.
Identities = 311/937 (33%), Positives = 485/937 (51%), Gaps = 83/937 (8%)
Query: 5 KLFHLQILKHGFAYDV-FLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
+ H +I K ++++ FL L+ +Y + G L A K+FDEMPDR + +W ++ Y
Sbjct: 100 RQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVS 159
Query: 64 KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
G A ++ M G L + ++L+AC + + G ++H L++K G
Sbjct: 160 NGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL--RDIRSGSELHSLLVKLGYHSTG 217
Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETR-DLISWNSIISVYSQRGDTISVFKLFSRMQ 182
+ N L++MY + ARR+F+ + + D + WNSI+S YS G ++ +LF M
Sbjct: 218 FIVNALVSMYAKN-DDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH 276
Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
G PN YT +VS
Sbjct: 277 MTG----PAPNSYT----------------------------------------IVSALT 292
Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDM-VAVGNGLVNMY 301
F YA+ GKE+H +++S + V N L+ MY
Sbjct: 293 ACDGFSYAKL----------------------GKEIHASVLKSSTHSSELYVCNALIAMY 330
Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
+CG + + + R M D V+WN++I G QN Y+EA+ F M G S S+
Sbjct: 331 TRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMT 390
Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
S +++ L ++ G ++H +K G DS++ V N L+ +Y+ + F M +
Sbjct: 391 SIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDK 450
Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
D +SW +VI +A ++ V EA++ + D+ + + + +IL A+S + ++
Sbjct: 451 DLISWTTVIAGYAQNDCHV-EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 509
Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
H +++ + + T I+N L+ YGKC M ++F + + +D VSW SMIS N
Sbjct: 510 HCHILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESI-KGKDVVSWTSMISSSALNGN 567
Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRA--CLEFDVVIG 599
+A+ L M++ G D +LSA AS++ L +G E+H +R CLE + +
Sbjct: 568 ESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV- 626
Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL 659
A+VDMY+ CG + A FD + + + + SMI+ Y HG G A+ LF +M+ +
Sbjct: 627 -AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVS 685
Query: 660 PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEE 719
PDH++F+ +L ACSHAGL+DEG K M Y L P E + C+VD+LGRA + + E
Sbjct: 686 PDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFE 745
Query: 720 FINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASG 779
F+ M P + +W +L A CR++ K E+G AA L E+EP+N N VL++N++A
Sbjct: 746 FVKMMKTEPTAEVWCALLAA-CRSHSEK-EIGEIAAQRLLELEPKNPGNLVLVSNVFAEQ 803
Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
G+W DV K R MK + ++K GCSW+ M VH F A D+SHPE IYEKL E+ +K+
Sbjct: 804 GRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKL 863
Query: 840 -RDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNS-KLPIRIMKNLRVCGDC 897
R+ GYV TKF L +++ K ++ HSE+IA+A+ L R + +RI KNLRVC DC
Sbjct: 864 EREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDC 923
Query: 898 HSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
H+ K +SK+ R+IV+RD+NRFHHF G CSCGD W
Sbjct: 924 HTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 156 bits (395), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 139/587 (23%), Positives = 251/587 (42%), Gaps = 98/587 (16%)
Query: 1 SKDAKLFHLQILKHG-FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVS 59
+K K H +LK + ++++CN LI +Y R G + A ++ +M + + V+W ++
Sbjct: 300 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 359
Query: 60 GYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
GY M EA + F +M+ AG + ++ S++ A S GM++H V+K
Sbjct: 360 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRL--SNLLAGMELHAYVIKHGW 417
Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
+ V N LI MY C T R F + +DLISW ++I+ Y+Q + +LF
Sbjct: 418 DSNLQVGNTLIDMYSKC-NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF- 475
Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
R+ + ++ +E GS++ A SSVL ++++I + + GLL D + + LV
Sbjct: 476 ---RDVAKKRMEIDEMILGSILRA--SSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVD 529
Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--------------RR------------ 273
+ + N YA ++FE + K+VVS ++ RR
Sbjct: 530 VYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVA 589
Query: 274 ---------------KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
KG+E+H YL+R G ++ +V+MYA CG + +++VF +
Sbjct: 590 LLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE 649
Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
K + + +MI+ +GC + A+ F MR + + + S ++ L +C+ G + G+
Sbjct: 650 RKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGR- 708
Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA 438
G+L + E++ W D
Sbjct: 709 ---------------------------GFLK------IMEHEYELEPWPEHYVCLVDMLG 735
Query: 439 LVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS---MGKLGHQVHAQVIKYNVANETT 495
+ V+ + ++ P + +LAA S S +G++ Q ++ N N
Sbjct: 736 RANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVL 795
Query: 496 IENALLSCYGKCGEMDDCEKIFARMS----ERRDEVSWNSMISGYIH 538
+ N + + G +D EK+ A+M E+ SW M G +H
Sbjct: 796 VSNV----FAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEM-DGKVH 837
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 505 bits (1300), Expect = e-142, Method: Compositional matrix adjust.
Identities = 284/763 (37%), Positives = 429/763 (56%), Gaps = 49/763 (6%)
Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--- 271
L+QIL +V K GL + + + LVS F R G+ A ++FE + K V + +++G
Sbjct: 53 LRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAK 112
Query: 272 --------------------------------------RRKGKEVHGYLIRSGL-FDMVA 292
R GKE+HG L++SG D+ A
Sbjct: 113 VSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFA 172
Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
+ GL NMYAKC ++++R VF M +D VSWNT+++G QNG A+ +M +
Sbjct: 173 M-TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN 231
Query: 353 LMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
L S +++S L + ++L I +G++IHG ++ G DS V++S AL+ +YA G L
Sbjct: 232 LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETAR 291
Query: 413 KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
++F M E + VSWNS+I A+ +E EA+ + M G P V+ + L A +
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNEN-PKEAMLIFQKMLDEGVKPTDVSVMGALHACADL 350
Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSM 532
+ G +H ++ + ++ N+L+S Y KC E+D +F ++ + R VSWN+M
Sbjct: 351 GDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL-QSRTLVSWNAM 409
Query: 533 ISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL 592
I G+ N A+N M R + D FT+ +V++A A ++ +H +R+CL
Sbjct: 410 ILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL 469
Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
+ +V + +ALVDMY+KCG I A FD+M R+V +WN+MI GY HG G AL LF +
Sbjct: 470 DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEE 529
Query: 653 MKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG 712
M+ P+ VTF+ V+SACSH+GLV+ G K F M + Y + ++ + MVDLLGRAG
Sbjct: 530 MQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAG 589
Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLL 772
L++ +FI +MP+ P ++ +LGAC + KAA LFE+ P + +VLL
Sbjct: 590 RLNEAWDFIMQMPVKPAVNVYGAMLGAC--QIHKNVNFAEKAAERLFELNPDDGGYHVLL 647
Query: 773 ANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKL 832
AN+Y + WE V + R +M ++K GCS V +K+ VH F +G +HP+ IY L
Sbjct: 648 ANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFL 707
Query: 833 KELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNL 891
++L +++AGYVP T L +E + KE L+S HSEK+A++F +L + I + KNL
Sbjct: 708 EKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNL 766
Query: 892 RVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
RVC DCH+A K+IS + GREIV+RD RFHHF +G CSCGDYW
Sbjct: 767 RVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 165/595 (27%), Positives = 289/595 (48%), Gaps = 70/595 (11%)
Query: 80 AGFLLNRYALGSVLRACQECGPSGFKFGM-QVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
A LL R S L+ ++ P FK G+ Q H K LVS L YGS
Sbjct: 40 AALLLER---CSSLKELRQILPLVFKNGLYQEHFFQTK-------LVS--LFCRYGS--- 84
Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
D A R+FE I+++ + +++++ +++ D + F RM+ + ++P Y F
Sbjct: 85 -VDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD----DVEPVVYNFT 139
Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
L+ + + ++I ++ K+G DL+ + L + +A+ ARK+F++M
Sbjct: 140 YLLKVCGDE--AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
Query: 259 QKNVVSMNGLMEGRRK-----------------------------------------GKE 277
++++VS N ++ G + GKE
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKE 257
Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
+HGY +RSG +V + LV+MYAKCG+++ +R +F M+ ++ VSWN+MI QN
Sbjct: 258 IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNEN 317
Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
+EA++ F M +G+ ++ S++ L +CA LG + G+ IH ++LGLD +VSV N+
Sbjct: 318 PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNS 377
Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSP 457
L+S+Y + +F + VSWN++I FA + + +A+ Y+ MR P
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPI-DALNYFSQMRSRTVKP 436
Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIF 517
+ T+++++ A + S+ +H V++ + + AL+ Y KCG + IF
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF 496
Query: 518 ARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATL 577
MSER +WN+MI GY + A+ L M + + + TF +V+SAC+ +
Sbjct: 497 DMMSERH-VTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
Query: 578 ERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR---NVY 628
E G++ + +E + A+VD+ + GR++ A F MPV+ NVY
Sbjct: 556 EAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVY 610
Score = 150 bits (378), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 213/476 (44%), Gaps = 62/476 (13%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
K H ++K GF+ D+F L N+Y + + A K+FD MP+R+ VSW IV+GY+
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 65 GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
GM+ A +M K M + + SVL A G ++H ++S FD L
Sbjct: 215 GMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL--RLISVGKEIHGYAMRSG--FDSL 270
Query: 125 V--SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
V S L+ MY C S + AR++F+ + R+++SWNS+I Y Q + +F +M
Sbjct: 271 VNISTALVDMYAKC-GSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML 329
Query: 183 REGFRYSLKPNEYT-FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
EG +KP + + G+L A L + ++ + GL ++ V ++L+S +
Sbjct: 330 DEG----VKPTDVSVMGALHACADLGDLERGRFIHKLSV---ELGLDRNVSVVNSLISMY 382
Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG------------------------------ 271
+ A +F ++ + +VS N ++ G
Sbjct: 383 CKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYV 442
Query: 272 -----------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
K +HG ++RS L V V LV+MYAKCG I +R +F M +
Sbjct: 443 SVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSER 502
Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-- 378
+WN MI G +G + A+ F M++ + + + +S +S+C+ G + G +
Sbjct: 503 HVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF 562
Query: 379 -IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
+ E + L D A++ L AG L+ MP V+ + +++GA
Sbjct: 563 YMMKENYSIELSMD--HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGA 616
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%)
Query: 1 SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
+ AK H +++ +VF+ L+++Y + G + A +FD M +R+ +W ++ G
Sbjct: 454 THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513
Query: 61 YTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
Y G A ++F+EM + N SV+ AC G
Sbjct: 514 YGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 501 bits (1290), Expect = e-140, Method: Compositional matrix adjust.
Identities = 289/792 (36%), Positives = 440/792 (55%), Gaps = 100/792 (12%)
Query: 210 SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM 269
+G + Q + V K+GL+ +Y+ + L++ +++ G +ARK+F++M + S N ++
Sbjct: 28 NGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVL 87
Query: 270 EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
Y+K G +D + F + +DSVSW TMI
Sbjct: 88 SA-----------------------------YSKRGDMDSTCEFFDQLPQRDSVSWTTMI 118
Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
G G Y +AI M ++G+ + F+L + L+S A+ + G+++H +KLGL
Sbjct: 119 VGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLR 178
Query: 390 SDVSVSNALLSLYA-------------------------------DAGYLSRCLKVFFLM 418
+VSVSN+LL++YA G + + F M
Sbjct: 179 GNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM 238
Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDM-RRAGWSPNGVTFINILAAASSFSMGKL 477
E D V+WNS+I F + A+ + M R + SP+ T ++L+A ++ +
Sbjct: 239 AERDIVTWNSMISGF-NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCI 297
Query: 478 GHQVHAQVIKYNVANETTIENALLSCYGKCG----------------------------- 508
G Q+H+ ++ + NAL+S Y +CG
Sbjct: 298 GKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357
Query: 509 ----EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
+M+ + IF + +R D V+W +MI GY + +A+NL M+ GQR + +T
Sbjct: 358 IKLGDMNQAKNIFVSLKDR-DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTL 416
Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
A +LS +S+A+L G ++H V++ + V + +AL+ MY+K G I ASR FDL+
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRC 476
Query: 625 -RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFK 683
R+ SW SMI A+HGH ++AL LF M ++G PDH+T+VGV SAC+HAGLV++G +
Sbjct: 477 ERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ 536
Query: 684 HFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRA 743
+F M V +IP L ++CMVDL GRAG L + +EFI KMPI P+ + W ++L A CR
Sbjct: 537 YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA-CRV 595
Query: 744 NCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGC 803
+ + +LG+ AA L +EP+N+ Y LAN+Y++ GKWE+ AK RK+MK+ VKKE G
Sbjct: 596 H-KNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGF 654
Query: 804 SWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDL 863
SW+ +K VHVF D +HPEK+ IY +K++ +++ GYVP T L DLE E KE +
Sbjct: 655 SWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQI 714
Query: 864 VSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHH 922
+ +HSEK+A+AF +++ K +RIMKNLRVC DCH+A KFISK+VGREI++RD+ RFHH
Sbjct: 715 LRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHH 774
Query: 923 FNDGKCSCGDYW 934
F DG CSC DYW
Sbjct: 775 FKDGFCSCRDYW 786
Score = 209 bits (533), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 162/597 (27%), Positives = 278/597 (46%), Gaps = 102/597 (17%)
Query: 4 AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEM----------------- 46
A+L H +++K G + V+L N L+NVY + G A KLFDEM
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 47 --------------PDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSV 92
P R+SVSW ++ GY + G ++A ++ +MV+ G ++ L +V
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 93 LR--ACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC-------------- 136
L A C +G K VH ++K + VSN L+ MY C
Sbjct: 153 LASVAATRCMETGKK----VHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV 208
Query: 137 ----------------LESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
+ D A FE++ RD+++WNS+IS ++QRG + +FS+
Sbjct: 209 VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSK 268
Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
M R+ L P+ +T S+++A + L + +QI + + G V +AL+S
Sbjct: 269 MLRDSL---LSPDRFTLASVLSACAN--LEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNM 300
++R G AR++ EQ K++ ++ G+ L++
Sbjct: 324 YSRCGGVETARRLIEQRGTKDL--------------KIEGF-------------TALLDG 356
Query: 301 YAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSL 360
Y K G ++ ++++F + +D V+W MI G +Q+G Y EAI F +M G ++++L
Sbjct: 357 YIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTL 416
Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP- 419
+ LS +SL + G+QIHG +K G VSVSNAL+++YA AG ++ + F L+
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRC 476
Query: 420 EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGH 479
E D VSW S+I A A EA++ + M G P+ +T++ + +A + + G
Sbjct: 477 ERDTVSWTSMIIALA-QHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR 535
Query: 480 QVHAQVIKYNVANETTIENA-LLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
Q + + T A ++ +G+ G + + ++ +M D V+W S++S
Sbjct: 536 QYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 128/293 (43%), Gaps = 74/293 (25%)
Query: 464 NILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE 522
N+L + + S G+ Q VH +VIK + + N L++ Y K G K+F M
Sbjct: 18 NLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPL 77
Query: 523 R------------------------------RDEVSWNSMISGYIHNELLPKAMNLVWFM 552
R RD VSW +MI GY + KA+ ++ M
Sbjct: 78 RTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDM 137
Query: 553 MQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKC--- 609
++ G FT VL++ A+ +E G +VH+ V+ L +V + ++L++MY+KC
Sbjct: 138 VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDP 197
Query: 610 ----------------------------GRIDYASRFFDLMPVRNVYSWNSMISGYARHG 641
G++D A F+ M R++ +WNSMISG+ + G
Sbjct: 198 MMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRG 257
Query: 642 HGDKALTLFSQMKLDGPL-PDHVTFVGVLSACS-----------HAGLVDEGF 682
+ +AL +FS+M D L PD T VLSAC+ H+ +V GF
Sbjct: 258 YDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGF 310
Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 139/302 (46%), Gaps = 17/302 (5%)
Query: 24 NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
L++ Y+++GD+ A +F + DR+ V+W ++ GY G EA +F+ MV G
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Query: 84 LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCA 143
N Y L ++L + G Q+H +KS + + VSN LI MY T A
Sbjct: 411 PNSYTLAAMLSVASS--LASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITS-A 467
Query: 144 RRIFEEIE-TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
R F+ I RD +SW S+I +Q G +LF M EG R P+ T+ + +
Sbjct: 468 SRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLR----PDHITYVGVFS 523
Query: 203 AAYSSVLSGSYLLQQILAMVKKAG-LLSDLYVGSALVSGFARLGNFYYARKIFEQM-IQK 260
A + L +Q M+K ++ L + +V F R G A++ E+M I+
Sbjct: 524 ACTHAGLVNQG--RQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP 581
Query: 261 NVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRSVFR 315
+VV+ L+ R K + G + L + +G L N+Y+ CG +++ + +
Sbjct: 582 DVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRK 641
Query: 316 FM 317
M
Sbjct: 642 SM 643
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 500 bits (1288), Expect = e-140, Method: Compositional matrix adjust.
Identities = 290/788 (36%), Positives = 447/788 (56%), Gaps = 76/788 (9%)
Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY 213
D+ WN IS Y + G ++F RM R +SSV SY
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPR---------------------WSSV---SY 98
Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR 273
+ ++SG+ R G F ARK+F++M ++++VS N +++G
Sbjct: 99 ---------------------NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYV 137
Query: 274 KGKEVHGYLIRSGLFDM-----VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTM 328
+ + + LF++ V N +++ YA+ G +DD+RSVF M K+ VSWN +
Sbjct: 138 RNRNLGKA---RELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194
Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
+S QN EEA M F + N++L+S +C G++ + + +
Sbjct: 195 LSAYVQNSKMEEACMLFKS-------RENWALVSW--NCLLGGFVKKKKIVEARQFFDSM 245
Query: 389 D-SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYY 447
+ DV N +++ YA +G + ++F P D +W +++ + + +V EA + +
Sbjct: 246 NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNR-MVEEARELF 304
Query: 448 LDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
M N V++ +LA ++ ++ + NV + N +++ Y +C
Sbjct: 305 DKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNV----STWNTMITGYAQC 356
Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
G++ + + +F +M +RD VSW +MI+GY + +A+ L M + G RL+ +F++
Sbjct: 357 GKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSA 415
Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNV 627
LS CA V LE G ++H V+ E +G+AL+ MY KCG I+ A+ F M +++
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475
Query: 628 YSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKS 687
SWN+MI+GY+RHG G+ AL F MK +G PD T V VLSACSH GLVD+G ++F +
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYT 535
Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
M+Q YG++P + ++CMVDLLGRAG L+ + MP P++ IW T+LGA R +
Sbjct: 536 MTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA-SRVHG-N 593
Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
TEL AA+ +F MEP+N+ YVLL+N+YAS G+W DV K R M++ VKK G SW+
Sbjct: 594 TELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIE 653
Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
+++ H F GDE HPEKD I+ L+EL+ +M+ AGYV +T L D+E E KE +V YH
Sbjct: 654 IQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYH 713
Query: 868 SEKIAVAFVLTR-NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
SE++AVA+ + R +S PIR++KNLRVC DCH+A K++++I GR I+LRD+NRFHHF DG
Sbjct: 714 SERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDG 773
Query: 927 KCSCGDYW 934
CSCGDYW
Sbjct: 774 SCSCGDYW 781
Score = 190 bits (482), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 135/521 (25%), Positives = 241/521 (46%), Gaps = 66/521 (12%)
Query: 19 DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
D+ N +I YVR +L A +LF+ MP+R+ SW ++SGY G ++A +F M
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP 184
Query: 79 RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
N + ++L A + M+ C++ KS + + + N L+ + +
Sbjct: 185 EK----NDVSWNALLSAYVQNSK------MEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
+ AR+ F+ + RD++SWN+II+ Y+Q G +LF
Sbjct: 235 IVE-ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE------------------ 275
Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
+ D++ +A+VSG+ + AR++F++M
Sbjct: 276 ---------------------------SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP 308
Query: 259 QKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDM-----VAVGNGLVNMYAKCGTIDDSRSV 313
++N VS N ++ G +G+ + + LFD+ V+ N ++ YA+CG I +++++
Sbjct: 309 ERNEVSWNAMLAGYVQGERME---MAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNL 365
Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
F M +D VSW MI+G Q+G EA+ F M R+G + S S LS+CA + +
Sbjct: 366 FDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVAL 425
Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
LG+Q+HG +K G ++ V NALL +Y G + +F M D VSWN++I +
Sbjct: 426 ELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGY 485
Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVAN 492
+ A++++ M+R G P+ T + +L+A S + G Q + Y V
Sbjct: 486 S-RHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMP 544
Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
+ ++ G+ G ++D + M D W +++
Sbjct: 545 NSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585
Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 145/304 (47%), Gaps = 20/304 (6%)
Query: 18 YDVFLC------NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
+DV C NT+I Y + G ++ A LFD+MP R+ VSWA +++GY+ G S EA
Sbjct: 335 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEAL 394
Query: 72 KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
++F +M R G LNR + S L C + + G Q+H ++K V N L+
Sbjct: 395 RLFVQMEREGGRLNRSSFSSALSTCADV--VALELGKQLHGRLVKGGYETGCFVGNALLL 452
Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
MY C S + A +F+E+ +D++SWN++I+ YS+ G + F M+REG LK
Sbjct: 453 MYCKC-GSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG----LK 507
Query: 192 PNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYAR 251
P++ T ++++A + L Q M + G++ + + +V R G A
Sbjct: 508 PDDATMVAVLSACSHTGLVDKG-RQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAH 566
Query: 252 KIFEQMIQKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCG 305
+ + M + ++ G + G R G +F M +G L N+YA G
Sbjct: 567 NLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSG 626
Query: 306 TIDD 309
D
Sbjct: 627 RWGD 630
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 169/405 (41%), Gaps = 81/405 (20%)
Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI------GAFADSE 437
LK G DSD+ N +S Y G + L+VF MP VS+N +I G F +
Sbjct: 57 LKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELAR 115
Query: 438 ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIE 497
L E + L W+ + I + ++GK ++ + +
Sbjct: 116 KLFDEMPERDL----VSWN------VMIKGYVRNRNLGKA-----RELFEIMPERDVCSW 160
Query: 498 NALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ 557
N +LS Y + G +DD +F RM E+ D VSWN+++S Y+ N + +
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKND-VSWNALLSAYVQNSKMEE------------- 206
Query: 558 RLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASR 617
AC + E + +V + L+ + K +I A +
Sbjct: 207 ------------ACMLFKSRE--------------NWALVSWNCLLGGFVKKKKIVEARQ 240
Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGL 677
FFD M VR+V SWN++I+GYA+ G D+A LF + P+ D T+ ++S +
Sbjct: 241 FFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMVSGYIQNRM 296
Query: 678 VDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG--RAGELDKIEEFINKMPITPNSLIWRT 735
V+E + F M P+ + S L G + ++ +E + MP N W T
Sbjct: 297 VEEARELFDKM-------PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR-NVSTWNT 348
Query: 736 VLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGG 780
++ A C K +A N+ +M ++ V++ + Y+ G
Sbjct: 349 MITGY--AQCGKIS---EAKNLFDKMPKRDPVSWAAMIAGYSQSG 388
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 153/347 (44%), Gaps = 67/347 (19%)
Query: 10 QILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE 69
Q+ DVF +++ Y++ + A +LFD+MP+RN VSW +++GY E
Sbjct: 271 QLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQ----GE 326
Query: 70 ACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVL 129
+M KE+ + ++ T+ N +
Sbjct: 327 RMEMAKEL--------------------------------FDVMPCRNVSTW-----NTM 349
Query: 130 IAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYS 189
I Y C + ++ A+ +F+++ RD +SW ++I+ YSQ G + +LF +M+REG R
Sbjct: 350 ITGYAQCGKISE-AKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL- 407
Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
N +F S ++ V L +Q+ + K G + +VG+AL+ + + G+
Sbjct: 408 ---NRSSFSSALSTCADVV--ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462
Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY----------LIRSGLFDMVAVGNGLVN 299
A +F++M K++VS N ++ G + HG+ + R GL A +++
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSR----HGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Query: 300 MYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA 341
+ G +D R F M + +S + M+ L + G E+A
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDA 565
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%)
Query: 4 AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
K H +++K G+ F+ N L+ +Y + G + A+ LF EM ++ VSW +++GY+
Sbjct: 428 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR 487
Query: 64 KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
G A + F+ M R G + + +VL AC G
Sbjct: 488 HGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTG 524
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 125/307 (40%), Gaps = 61/307 (19%)
Query: 586 CGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDK 645
CG E++V I S Y + GR + A R F MP + S+N MISGY R+G +
Sbjct: 59 CGDSDIKEWNVAISS-----YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFEL 113
Query: 646 ALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE--QFSC 703
A LF +M P D V++ ++ G V ++ +++ ++P+ + ++
Sbjct: 114 ARKLFDEM----PERDLVSWNVMIK-----GYVRN--RNLGKARELFEIMPERDVCSWNT 162
Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA------------------------ 739
M+ + G +D ++MP N + W +L A
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMP-EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVS 221
Query: 740 --CCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEV 797
C K + +A M ++ V++ + YA GK + +AR+ E+ V
Sbjct: 222 WNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGK---IDEARQLFDESPV 278
Query: 798 KKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD---AGYVPQTKF---- 850
+ +W M G ++ ++L ++K+ E N+ + AGYV +
Sbjct: 279 QDV--FTWTAMVSG---YIQNRMVEEAREL-FDKMPERNEVSWNAMLAGYVQGERMEMAK 332
Query: 851 ALFDLEP 857
LFD+ P
Sbjct: 333 ELFDVMP 339
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 498 bits (1282), Expect = e-139, Method: Compositional matrix adjust.
Identities = 293/863 (33%), Positives = 466/863 (53%), Gaps = 72/863 (8%)
Query: 91 SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE--STDCARRIFE 148
+ LR ++ P+ F +V ++K+ D SN ++ L AR++++
Sbjct: 16 ATLRQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVE---DLLRRGQVSAARKVYD 72
Query: 149 EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSV 208
E+ ++ +S N++IS + + GD S LF M P+ T ++
Sbjct: 73 EMPHKNTVSTNTMISGHVKTGDVSSARDLFDAM----------PDR-------TVVTWTI 115
Query: 209 LSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ------KNV 262
L G Y AR +F A K+F QM + +
Sbjct: 116 LMGWY----------------------------ARNSHFDEAFKLFRQMCRSSSCTLPDH 147
Query: 263 VSMNGLMEG------RRKGKEVHGYLIRSGLFD---MVAVGNGLVNMYAKCGTIDDSRSV 313
V+ L+ G + +VH + ++ G FD + V N L+ Y + +D + +
Sbjct: 148 VTFTTLLPGCNDAVPQNAVGQVHAFAVKLG-FDTNPFLTVSNVLLKSYCEVRRLDLACVL 206
Query: 314 FRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWI 373
F + KDSV++NT+I+G +++G Y E+I F MR+ G S+F+ L + L
Sbjct: 207 FEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDF 266
Query: 374 MLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAF 433
LGQQ+H + G D SV N +L Y+ + +F MPE D VS+N VI ++
Sbjct: 267 ALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSY 326
Query: 434 ADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANE 493
+ ++ ++ ++ +M+ G+ F +L+ A++ S ++G Q+H Q + +
Sbjct: 327 SQADQY-EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385
Query: 494 TTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM 553
+ N+L+ Y KC ++ E IF + +R VSW ++ISGY+ L + L M
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQR-TTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 554 QRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRID 613
R D TFATVL A AS A+L G ++HA +R+ +V GS LVDMY+KCG I
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504
Query: 614 YASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
A + F+ MP RN SWN++IS +A +G G+ A+ F++M G PD V+ +GVL+ACS
Sbjct: 505 DAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
Query: 674 HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIW 733
H G V++G ++F++MS +YG+ P+ + ++CM+DLLGR G + E+ +++MP P+ ++W
Sbjct: 565 HCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMW 624
Query: 734 RTVLGACCRANCRKTELGRKAANMLFEMEP-QNAVNYVLLANMYASGGKWEDVAKARKAM 792
+VL A CR + + L +AA LF ME ++A YV ++N+YA+ G+WE V +KAM
Sbjct: 625 SSVLNA-CRIH-KNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAM 682
Query: 793 KEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFAL 852
+E +KK SWV + +HVF + D++HP D I K+ EL ++ GY P T +
Sbjct: 683 RERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVV 742
Query: 853 FDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGRE 911
D++ + K + + YHSE++AVAF L + PI +MKNLR C DCH+A K ISKIV RE
Sbjct: 743 QDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKRE 802
Query: 912 IVLRDSNRFHHFNDGKCSCGDYW 934
I +RD++RFHHF++G CSCGDYW
Sbjct: 803 ITVRDTSRFHHFSEGVCSCGDYW 825
Score = 206 bits (523), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 156/585 (26%), Positives = 275/585 (47%), Gaps = 68/585 (11%)
Query: 24 NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAG-- 81
NT+I+ +V+ GD++SA LFD MPDR V+W ++ Y +EA K+F++M R+
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 82 FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG----LVSNVLIAMYGSCL 137
L + ++L C + P G QVH +K FD VSNVL+ Y +
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQN-AVG-QVHAFAVKLG--FDTNPFLTVSNVLLKSYCE-V 197
Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
D A +FEEI +D +++N++I+ Y + G LF +M++ G +P+++TF
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGH----QPSDFTF 253
Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
++ A L L QQ+ A+ G D VG+ ++ +++ R +F++M
Sbjct: 254 SGVLKAVVG--LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEM 311
Query: 258 IQKNVVSMNGLMEG-----------------------RRK------------------GK 276
+ + VS N ++ RR G+
Sbjct: 312 PELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGR 371
Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
++H + + ++ VGN LV+MYAKC +++ +F+ + + +VSW +ISG Q G
Sbjct: 372 QLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKG 431
Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
+ + F MR L + + + L + AS ++LG+Q+H ++ G +V +
Sbjct: 432 LHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGS 491
Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS---EALVSEAVKYYLDMRRA 453
L+ +YA G + ++VF MP+ + VSWN++I A AD+ EA A+ + M +
Sbjct: 492 GLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEA----AIGAFAKMIES 547
Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
G P+ V+ + +L A S + G + A Y + + +L G+ G +
Sbjct: 548 GLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAE 607
Query: 513 CEKIFARMSERRDEVSWNSMISG-YIH-NELLPKAMNLVWFMMQR 555
EK+ M DE+ W+S+++ IH N+ L + F M++
Sbjct: 608 AEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEK 652
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/489 (24%), Positives = 222/489 (45%), Gaps = 48/489 (9%)
Query: 7 FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
H + GF+ D + N +++ Y + + LFDEMP+ + VS+ ++S Y+
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 67 SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
+ F+EM GF + ++L S + G Q+HC L + V
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIAANL--SSLQMGRQLHCQALLATADSILHVG 389
Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
N L+ MY C E + A IF+ + R +SW ++IS Y Q+G + KLF++M+
Sbjct: 390 NSLVDMYAKC-EMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGS-- 446
Query: 187 RYSLKPNEYTFGSLI--TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
+L+ ++ TF +++ +A+++S+L G +Q+ A + ++G L +++ GS LV +A+
Sbjct: 447 --NLRADQSTFATVLKASASFASLLLG----KQLHAFIIRSGNLENVFSGSGLVDMYAKC 500
Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE------VHGYLIRSGL-FDMVAVGNGL 297
G+ A ++FE+M +N VS N L+ + +I SGL D V++ G+
Sbjct: 501 GSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSIL-GV 559
Query: 298 VNMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA--IMNFCAMRR 350
+ + CG ++ F+ M I + M+ L +NG + EA +M+
Sbjct: 560 LTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEP 619
Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
D +M S S L++C L ++ + + D + ++ ++YA AG +
Sbjct: 620 DEIMWS-----SVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEK 674
Query: 411 CLKVFFLM--------PEHDQVSWNSVIGAFA-------DSEALVSEAVKYYLDMRRAGW 455
V M P + V N I F+ + + +V + + ++ R G+
Sbjct: 675 VRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGY 734
Query: 456 SPNGVTFIN 464
P+ + +
Sbjct: 735 KPDTSSVVQ 743
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
K H I++ G +VF + L+++Y + G + A ++F+EMPDRN+VSW ++S +
Sbjct: 472 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADN 531
Query: 65 GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
G A F +M+ +G + ++ VL AC CG
Sbjct: 532 GDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 495 bits (1274), Expect = e-139, Method: Compositional matrix adjust.
Identities = 276/752 (36%), Positives = 421/752 (55%), Gaps = 43/752 (5%)
Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------- 271
+ K G DL+ + L++ + + G A +F++M ++N VS L +G
Sbjct: 75 ILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLY 134
Query: 272 ---RRKGKEV------------------------HGYLIRSGLFDMVAVGNGLVNMYAKC 304
R+G E+ H +++ G VG L+N Y+ C
Sbjct: 135 SRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVC 194
Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
G++D +R+VF ++ KD V W ++S +NG +E+++ MR G M +N++ + L
Sbjct: 195 GSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTAL 254
Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
+ LG + +HG+ LK D V LL LY G +S KVF MP++D V
Sbjct: 255 KASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVV 314
Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
W+ +I F + +EAV ++ MR A PN T +IL + LG Q+H
Sbjct: 315 PWSFMIARFCQN-GFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL 373
Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
V+K + + NAL+ Y KC +MD K+FA +S + +EVSWN++I GY + K
Sbjct: 374 VVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK-NEVSWNTVIVGYENLGEGGK 432
Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
A ++ ++ + TF++ L ACAS+A+++ G++VH ++ V + ++L+D
Sbjct: 433 AFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLID 492
Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
MY+KCG I +A F+ M +V SWN++ISGY+ HG G +AL + MK P+ +T
Sbjct: 493 MYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLT 552
Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
F+GVLS CS+AGL+D+G + F+SM + +G+ P LE ++CMV LLGR+G+LDK + I +
Sbjct: 553 FLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGI 612
Query: 725 PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
P P+ +IWR +L A N E R++A + ++ P++ YVL++NMYA +W +
Sbjct: 613 PYEPSVMIWRAMLSASMNQN--NEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWAN 670
Query: 785 VAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGY 844
VA RK+MKE VKKE G SW+ + VH F G HP+ LI L+ LN K AGY
Sbjct: 671 VASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGY 730
Query: 845 VPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR--NSKLPIRIMKNLRVCGDCHSAFK 902
VP L D++ E K+ + HSE++A+A+ L R +S+ I IMKNLR+C DCHSA K
Sbjct: 731 VPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMK 790
Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
IS IV R++V+RD NRFHHF+ G CSCGD+W
Sbjct: 791 VISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 220 bits (561), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 173/602 (28%), Positives = 293/602 (48%), Gaps = 70/602 (11%)
Query: 84 LNRYALGSVLRAC-QECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC 142
L+ +A G++LR C Q+ P K +HC +LK D +N+L+ Y D
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAK---AIHCDILKKGSCLDLFATNILLNAYVKAGFDKD- 102
Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT-FGSLI 201
A +F+E+ R+ +S+ ++ Y+ + D I L+SR+ REG + L P+ +T F L
Sbjct: 103 ALNLFDEMPERNNVSFVTLAQGYACQ-DPIG---LYSRLHREG--HELNPHVFTSFLKLF 156
Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
+ L + + + + + K G S+ +VG+AL++ ++ G+ AR +FE ++ K+
Sbjct: 157 VS-----LDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKD 211
Query: 262 VVSM---------NGLMEGRRK--------------------------------GKEVHG 280
+V NG E K K VHG
Sbjct: 212 IVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHG 271
Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
++++ VG GL+ +Y + G + D+ VF M D V W+ MI+ QNG E
Sbjct: 272 QILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNE 331
Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
A+ F MR ++ + F+L S L+ CA LG+Q+HG +K+G D D+ VSNAL+
Sbjct: 332 AVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALID 391
Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
+YA + +K+F + ++VSWN+VI + ++ +A + + R S V
Sbjct: 392 VYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGY-ENLGEGGKAFSMFREALRNQVSVTEV 450
Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
TF + L A +S + LG QVH IK N A + + N+L+ Y KCG++ + +F M
Sbjct: 451 TFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM 510
Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
E D SWN++ISGY + L +A+ ++ M R + + TF VLS C++ +++G
Sbjct: 511 -ETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQG 569
Query: 581 ME-----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMI 634
E + G+ CLE + +V + + G++D A + + +P +V W +M+
Sbjct: 570 QECFESMIRDHGIEPCLEH----YTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAML 625
Query: 635 SG 636
S
Sbjct: 626 SA 627
Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/577 (27%), Positives = 268/577 (46%), Gaps = 62/577 (10%)
Query: 4 AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
AK H ILK G D+F N L+N YV+ G A LFDEMP+RN+VS+ + GY
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA- 126
Query: 64 KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
+ ++ + R G LN + S L+ + + +H ++K +
Sbjct: 127 ---CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA--EICPWLHSPIVKLGYDSNA 181
Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
V LI Y C S D AR +FE I +D++ W I+S Y + G KL S M+
Sbjct: 182 FVGAALINAYSVC-GSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRM 240
Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSY-LLQQILAMVKKAGLLSDLYVGSALVSGFA 242
GF PN YTF TA +S+ G++ + + + K + D VG L+ +
Sbjct: 241 AGFM----PNNYTFD---TALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYT 293
Query: 243 RLGNFYYARKIFEQMIQKNVVS-------------------------------------- 264
+LG+ A K+F +M + +VV
Sbjct: 294 QLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSS 353
Query: 265 -MNGLMEGRRK--GKEVHGYLIRSGLFDM-VAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
+NG G+ G+++HG +++ G FD+ + V N L+++YAKC +D + +F + K
Sbjct: 354 ILNGCAIGKCSGLGEQLHGLVVKVG-FDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK 412
Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
+ VSWNT+I G + G +A F R+ + + + S L +CASL + LG Q+H
Sbjct: 413 NEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVH 472
Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
G +K V+VSN+L+ +YA G + VF M D SWN++I ++ + L
Sbjct: 473 GLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYS-THGLG 531
Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN-- 498
+A++ M+ PNG+TF+ +L+ S+ + G + +I+ + E +E+
Sbjct: 532 RQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR-DHGIEPCLEHYT 590
Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
++ G+ G++D K+ + + W +M+S
Sbjct: 591 CMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 232/498 (46%), Gaps = 27/498 (5%)
Query: 275 GKEVHGYLIRSG-LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
K +H +++ G D+ A N L+N Y K G D+ ++F M +++VS+ T+ G
Sbjct: 68 AKAIHCDILKKGSCLDLFAT-NILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGY- 125
Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
C ++ I + + R+G + S L SL + +H +KLG DS+
Sbjct: 126 --AC-QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAF 182
Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
V AL++ Y+ G + VF + D V W ++ + ++ +++K MR A
Sbjct: 183 VGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVEN-GYFEDSLKLLSCMRMA 241
Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
G+ PN TF L A+ VH Q++K + + LL Y + G+M D
Sbjct: 242 GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDA 301
Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
K+F M + D V W+ MI+ + N +A++L M + + FT +++L+ CA
Sbjct: 302 FKVFNEMP-KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAI 360
Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
G ++H V+ + D+ + +AL+D+Y+KC ++D A + F + +N SWN++
Sbjct: 361 GKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTV 420
Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
I GY G G KA ++F + + VTF L AC+ +D G QV+G
Sbjct: 421 IVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGV-------QVHG 473
Query: 694 L------IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
L ++ + ++D+ + G++ + N+M T + W ++ +
Sbjct: 474 LAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNALI-----SGYST 527
Query: 748 TELGRKAANMLFEMEPQN 765
LGR+A +L M+ ++
Sbjct: 528 HGLGRQALRILDIMKDRD 545
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 494 bits (1271), Expect = e-138, Method: Compositional matrix adjust.
Identities = 293/805 (36%), Positives = 439/805 (54%), Gaps = 67/805 (8%)
Query: 190 LKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD-LYVGSALVSGFARLGNFY 248
+KP+ Y F +L+ A L L +QI A V K G D + V + LV+ + + G+F
Sbjct: 93 IKPDNYAFPALLKAVAD--LQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFG 150
Query: 249 YARKIFEQMIQKNVVSMNGLM--------------------------------------- 269
K+F+++ ++N VS N L+
Sbjct: 151 AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS 210
Query: 270 -----EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
EG GK+VH Y +R G + + N LV MY K G + S+ + G+D V+
Sbjct: 211 NLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVT 269
Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
WNT++S L QN EA+ M +G+ F++ S L +C+ L + G+++H L
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329
Query: 385 KLG-LDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
K G LD + V +AL+ +Y + + +VF M + WN++I ++ +E EA
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH-DKEA 388
Query: 444 VKYYLDMRR-AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
+ ++ M AG N T ++ A +H V+K + + ++N L+
Sbjct: 389 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 448
Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE-------LLPKAMNLVWFMMQR 555
Y + G++D +IF +M E RD V+WN+MI+GY+ +E LL K NL + +
Sbjct: 449 MYSRLGKIDIAMRIFGKM-EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 507
Query: 556 GQRL----DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGR 611
R+ + T T+L +CA+++ L +G E+HA ++ L DV +GSALVDMY+KCG
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 567
Query: 612 IDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSA 671
+ + + FD +P +NV +WN +I Y HG+G +A+ L M + G P+ VTF+ V +A
Sbjct: 568 LQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAA 627
Query: 672 CSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL 731
CSH+G+VDEG + F M YG+ P + ++C+VDLLGRAG + + + +N MP N
Sbjct: 628 CSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKA 687
Query: 732 -IWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARK 790
W ++LGA N E+G AA L ++EP A +YVLLAN+Y+S G W+ + R+
Sbjct: 688 GAWSSLLGASRIHN--NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRR 745
Query: 791 AMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKF 850
MKE V+KE GCSW+ D VH FVAGD SHP+ + + L+ L ++MR GYVP T
Sbjct: 746 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSC 805
Query: 851 ALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVG 909
L ++E + KE L+ HSEK+A+AF +L + IR+ KNLRVC DCH A KFISKIV
Sbjct: 806 VLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVD 865
Query: 910 REIVLRDSNRFHHFNDGKCSCGDYW 934
REI+LRD RFH F +G CSCGDYW
Sbjct: 866 REIILRDVRRFHRFKNGTCSCGDYW 890
Score = 203 bits (517), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 157/596 (26%), Positives = 274/596 (45%), Gaps = 68/596 (11%)
Query: 5 KLFHLQILKHGFAYD-VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
K H + K G+ D V + NTL+N+Y + GD + K+FD + +RN VSW ++S
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 176
Query: 64 KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG-PSGFKFGMQVHCLVLKSNQTFD 122
A + F+ M+ + + L SV+ AC P G G QVH L+ + +
Sbjct: 177 FEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE-LN 235
Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
+ N L+AMYG L ++ + RDL++WN+++S Q + + M
Sbjct: 236 SFIINTLVAMYGK-LGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD-LYVGSALVSGF 241
EG ++P+E+T S++ A S L +++ A K G L + +VGSALV +
Sbjct: 295 LEG----VEPDEFTISSVLPAC--SHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 348
Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE------------------------ 277
R++F+ M + + N ++ G + +
Sbjct: 349 CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 408
Query: 278 ------------------VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
+HG++++ GL V N L++MY++ G ID + +F M
Sbjct: 409 AGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED 468
Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMR-----------RDGLMSSNFSLISTLSSCA 368
+D V+WNTMI+G + +E+A++ M+ R L ++ +L++ L SCA
Sbjct: 469 RDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA 528
Query: 369 SLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNS 428
+L + G++IH +K L +DV+V +AL+ +YA G L KVF +P+ + ++WN
Sbjct: 529 ALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNV 588
Query: 429 VIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV-HAQVIK 487
+I A+ EA+ M G PN VTFI++ AA S M G ++ +
Sbjct: 589 IIMAYG-MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPD 647
Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV-SWNSMI-SGYIHNEL 541
Y V + ++ G+ G + + ++ M ++ +W+S++ + IHN L
Sbjct: 648 YGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNL 703
Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 215/426 (50%), Gaps = 30/426 (7%)
Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
W ++ ++ EA++ + M G+ N++ + L + A L + LG+QIH
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 385 KLGLDSD-VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEA--LVS 441
K G D V+V+N L++LY G KVF + E +QVSWNS+I + E +
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK---LGHQVHAQVIKYNVANETTIEN 498
EA + LD P+ T ++++ A S+ M + +G QVHA ++ N I N
Sbjct: 185 EAFRCMLD---ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-N 240
Query: 499 ALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQR 558
L++ YGK G++ + + RD V+WN+++S NE L +A+ + M+ G
Sbjct: 241 TLVAMYGKLGKLASSKVLLGSFGG-RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 559 LDHFTFATVLSACASVATLERGMEVHACGVR-ACLEFDVVIGSALVDMYSKCGRIDYASR 617
D FT ++VL AC+ + L G E+HA ++ L+ + +GSALVDMY C ++ R
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 618 FFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD-GPLPDHVTFVGVLSACSHAG 676
FD M R + WN+MI+GY+++ H +AL LF M+ G L + T GV+ AC +G
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 677 LVDEGFKHFKSMSQVYGLIPQ----LEQF--SCMVDLLGRAGELDKIEEFINKMP----I 726
F ++G + + ++F + ++D+ R G++D KM +
Sbjct: 420 A-------FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 472
Query: 727 TPNSLI 732
T N++I
Sbjct: 473 TWNTMI 478
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 227/496 (45%), Gaps = 51/496 (10%)
Query: 2 KDAKLFHLQILKHG-FAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
+ K H LK+G + F+ + L+++Y + S ++FD M DR W +++G
Sbjct: 319 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG 378
Query: 61 YTHKGMSNEACKMFKEMVR-AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQ 119
Y+ EA +F M AG L N + V+ AC G F +H V+K
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG--AFSRKEAIHGFVVKRGL 436
Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVY---SQRGDTISVFK 176
D V N L+ MY S L D A RIF ++E RDL++WN++I+ Y D + +
Sbjct: 437 DRDRFVQNTLMDMY-SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLH 495
Query: 177 LFSRMQRE----GFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSD 230
++R+ R SLKPN T +++ AA S++ G ++I A K L +D
Sbjct: 496 KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG----KEIHAYAIKNNLATD 551
Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGYLIRSGL 287
+ VGSALV +A+ G +RK+F+Q+ QKNV++ N ++ G+E L+R +
Sbjct: 552 VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID-LLRMMM 610
Query: 288 FDMVAVGN-GLVNMYAKC---GTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCY 338
V ++++A C G +D+ +F M + S + ++ L + G
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRI 670
Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
+EA M RD + +S S L + + +G +I + L + L+ +V+ L
Sbjct: 671 KEAYQLMNMMPRDFNKAGAWS--SLLGASRIHNNLEIG-EIAAQNL-IQLEPNVASHYVL 726
Query: 399 LS-LYADAGYLSRCLKVFFLMPEH-----DQVSW---NSVIGAF--ADSEALVSEAVKYY 447
L+ +Y+ AG + +V M E SW + F DS SE + Y
Sbjct: 727 LANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGY 786
Query: 448 LD-----MRRAGWSPN 458
L+ MR+ G+ P+
Sbjct: 787 LETLWERMRKEGYVPD 802
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 489 bits (1260), Expect = e-137, Method: Compositional matrix adjust.
Identities = 269/724 (37%), Positives = 405/724 (55%), Gaps = 44/724 (6%)
Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
GN A E + N+V LM+ + V + + LF N L+ Y+K
Sbjct: 30 GNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSW----NNLLLAYSKA 85
Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFS---LI 361
G I + S F + +D V+WN +I G +G A+ + M RD S+N + L+
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD--FSANLTRVTLM 143
Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-- 419
+ L +S G + LG+QIHG+ +KLG +S + V + LL +YA+ G +S KVF+ +
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 420 ----------------------------EHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
E D VSW ++I A + L EA++ + +M+
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQN-GLAKEAIECFREMK 262
Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
G + F ++L A G Q+HA +I+ N + + +AL+ Y KC +
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLH 322
Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
+ +F RM ++++ VSW +M+ GY +A+ + M + G DH+T +SAC
Sbjct: 323 YAKTVFDRM-KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 572 ASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWN 631
A+V++LE G + H + + L V + ++LV +Y KCG ID ++R F+ M VR+ SW
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWT 441
Query: 632 SMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
+M+S YA+ G + + LF +M G PD VT GV+SACS AGLV++G ++FK M+
Sbjct: 442 AMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSE 501
Query: 692 YGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELG 751
YG++P + +SCM+DL R+G L++ FIN MP P+++ W T+L AC N E+G
Sbjct: 502 YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC--RNKGNLEIG 559
Query: 752 RKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
+ AA L E++P + Y LL+++YAS GKW+ VA+ R+ M+E VKKE G SW+ K
Sbjct: 560 KWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGK 619
Query: 812 VHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKI 871
+H F A DES P D IY KL+ELN K+ D GY P T F D+E K +++YHSE++
Sbjct: 620 LHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERL 679
Query: 872 AVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSC 930
A+AF ++ S PIR+ KNLRVC DCH+A K IS + GREI++RD+ RFH F DG CSC
Sbjct: 680 AIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSC 739
Query: 931 GDYW 934
GD+W
Sbjct: 740 GDFW 743
Score = 223 bits (569), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 162/564 (28%), Positives = 270/564 (47%), Gaps = 67/564 (11%)
Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
+H ++++ + + N ++ Y + ++S+ ARR+F+ I +L SWN+++ YS+ G
Sbjct: 28 IHGNIIRALPYPETFLYNNIVHAY-ALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAG 86
Query: 170 DTISVFKLFSRM-QREGFRYSLKPNEYTFGSLITAA----------YSSVLSGSYLL--- 215
+ F ++ R+G +++ Y+ L+ AA +S+ L+ L+
Sbjct: 87 LISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTML 146
Query: 216 ------------QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVV 263
+QI V K G S L VGS L+ +A +G A+K+F + +N V
Sbjct: 147 KLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTV 206
Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
N LM G CG I+D+ +FR M KDSV
Sbjct: 207 MYNSLMGG-----------------------------LLACGMIEDALQLFRGM-EKDSV 236
Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
SW MI GL QNG +EAI F M+ GL + S L +C LG I G+QIH
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEA 443
++ + V +AL+ +Y L VF M + + VSW +++ + + EA
Sbjct: 297 IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQT-GRAEEA 355
Query: 444 VKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSC 503
VK +LDM+R+G P+ T ++A ++ S + G Q H + I + + T+ N+L++
Sbjct: 356 VKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTL 415
Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
YGKCG++DD ++F M+ RD VSW +M+S Y + + L M+Q G + D T
Sbjct: 416 YGKCGDIDDSTRLFNEMNV-RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVT 474
Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVV--IG--SALVDMYSKCGRIDYASRFF 619
V+SAC+ +E+G E+ +V IG S ++D++S+ GR++ A RF
Sbjct: 475 LTGVISACSRAGLVEKGQRYFKLMTS---EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFI 531
Query: 620 DLMPV-RNVYSWNSMISGYARHGH 642
+ MP + W +++S G+
Sbjct: 532 NGMPFPPDAIGWTTLLSACRNKGN 555
Score = 156 bits (394), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 127/494 (25%), Positives = 213/494 (43%), Gaps = 95/494 (19%)
Query: 19 DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
++F N L+ Y + G ++ F+++PDR+ V+W ++ GY+ G+ A K + M+
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 79 RA-GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
R L R L ++L+ G G Q+H V+K LV + L+ MY +
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGH--VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 138 ESTDCARRIFEEIETR------------------------------DLISWNSIISVYSQ 167
+D A+++F ++ R D +SW ++I +Q
Sbjct: 189 CISD-AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQ 247
Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA--AYSSVLSGSYLLQQILAMVKKA 225
G + F M+ +G LK ++Y FGS++ A ++ G +QI A + +
Sbjct: 248 NGLAKEAIECFREMKVQG----LKMDQYPFGSVLPACGGLGAINEG----KQIHACIIRT 299
Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------- 272
+YVGSAL+ + + +YA+ +F++M QKNVVS ++ G
Sbjct: 300 NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF 359
Query: 273 ----------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
+G + HG I SGL V V N LV +Y KC
Sbjct: 360 LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC 419
Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
G IDDS +F M +D+VSW M+S Q G E I F M + GL +L +
Sbjct: 420 GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVI 479
Query: 365 SSCASLGWIMLGQQIHGEGLKL-----GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP 419
S+C+ G + GQ+ KL G+ + + ++ L++ +G L ++ MP
Sbjct: 480 SACSRAGLVEKGQRY----FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP 535
Query: 420 -EHDQVSWNSVIGA 432
D + W +++ A
Sbjct: 536 FPPDAIGWTTLLSA 549
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 201/447 (44%), Gaps = 60/447 (13%)
Query: 4 AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRN------------- 50
K H Q++K GF + + + L+ +Y VG ++ A K+F + DRN
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 51 -----------------SVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVL 93
SVSWA ++ G G++ EA + F+EM G +++Y GSVL
Sbjct: 218 CGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 94 RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
AC G G Q+H ++++N V + LI MY C + A+ +F+ ++ +
Sbjct: 278 PACGGLG--AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC-KCLHYAKTVFDRMKQK 334
Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA--YSSVLSG 211
+++SW +++ Y Q G K+F MQR G + P+ YT G I+A SS+ G
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG----IDPDHYTLGQAISACANVSSLEEG 390
Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
S Q +GL+ + V ++LV+ + + G+ + ++F +M ++ VS ++
Sbjct: 391 S----QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSA 446
Query: 272 RRK-GKEVHGY-----LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV-- 323
+ G+ V +++ GL G+++ ++ G ++ + F+ M + +
Sbjct: 447 YAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVP 506
Query: 324 ---SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
++ MI ++G EEA+ M + LS+C + G + +G+
Sbjct: 507 SIGHYSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKGNLEIGKWA- 562
Query: 381 GEGLKLGLDSDVSVSNALL-SLYADAG 406
E L + LD LL S+YA G
Sbjct: 563 AESL-IELDPHHPAGYTLLSSIYASKG 588
Score = 119 bits (299), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 125/257 (48%), Gaps = 12/257 (4%)
Query: 3 DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
+ K H I++ F +++ + LI++Y + L A +FD M +N VSW +V GY
Sbjct: 288 EGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYG 347
Query: 63 HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
G + EA K+F +M R+G + Y LG + AC S + G Q H + S
Sbjct: 348 QTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV--SSLEEGSQFHGKAITSGLIHY 405
Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
VSN L+ +YG C + D + R+F E+ RD +SW +++S Y+Q G + +LF +M
Sbjct: 406 VTVSNSLVTLYGKCGDIDD-STRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMV 464
Query: 183 REGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
+ G LKP+ T +I+A + V G + M + G++ + S ++
Sbjct: 465 QHG----LKPDGVTLTGVISACSRAGLVEKGQRYFK---LMTSEYGIVPSIGHYSCMIDL 517
Query: 241 FARLGNFYYARKIFEQM 257
F+R G A + M
Sbjct: 518 FSRSGRLEEAMRFINGM 534
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 23/180 (12%)
Query: 2 KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
++ FH + + G + V + N+L+ +Y + GD+ +++LF+EM R++VSW +VS Y
Sbjct: 388 EEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAY 447
Query: 62 THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
G + E ++F +MV+ G + L V+ AC G LV K + F
Sbjct: 448 AQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG------------LVEKGQRYF 495
Query: 122 D------GLVSNV-----LIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD 170
G+V ++ +I ++ + R I D I W +++S +G+
Sbjct: 496 KLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 18/233 (7%)
Query: 583 VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGH 642
+H +RA + + + +V Y+ YA R FD +P N++SWN+++ Y++ G
Sbjct: 28 IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGL 87
Query: 643 GDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFS 702
+ + F ++ P D VT+ ++ S +GLV K + +M + +
Sbjct: 88 ISEMESTFEKL----PDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLM 143
Query: 703 CMVDLLGRAGELD---KIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
M+ L G + +I + K+ L+ +L C A + +
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCIS-----DAKKVFY 198
Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
++ +N V Y L + G ED + + M++ V SW M G+
Sbjct: 199 GLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV------SWAAMIKGL 245
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust.
Identities = 256/662 (38%), Positives = 389/662 (58%), Gaps = 6/662 (0%)
Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
G+++HG++++SG + +VGN LV Y K +D +R VF M +D +SWN++I+G
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
NG E+ + F M G+ +++S + CA I LG+ +H G+K +
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333
Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
N LL +Y+ G L VF M + VS+ S+I +A E L EAVK + +M G
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYA-REGLAGEAVKLFEEMEEEG 392
Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
SP+ T +L + + + G +VH + + ++ + + NAL+ Y KCG M + E
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACAS 573
+F+ M +D +SWN++I GY N +A++L +++ + D T A VL ACAS
Sbjct: 453 LVFSEM-RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 511
Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
++ ++G E+H +R D + ++LVDMY+KCG + A FD + +++ SW M
Sbjct: 512 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 571
Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
I+GY HG G +A+ LF+QM+ G D ++FV +L ACSH+GLVDEG++ F M
Sbjct: 572 IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK 631
Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
+ P +E ++C+VD+L R G+L K FI MPI P++ IW +L CR + +L K
Sbjct: 632 IEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG-CRIH-HDVKLAEK 689
Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
A +FE+EP+N YVL+AN+YA KWE V + RK + + ++K GCSW+ +K V+
Sbjct: 690 VAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVN 749
Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
+FVAGD S+PE + I L+++ +M + GY P TK+AL D E KE+ + HSEK+A+
Sbjct: 750 IFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAM 809
Query: 874 AF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
A +++ IR+ KNLRVCGDCH KF+SK+ REIVLRDSNRFH F DG CSC
Sbjct: 810 ALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRG 869
Query: 933 YW 934
+W
Sbjct: 870 FW 871
Score = 205 bits (521), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/449 (30%), Positives = 227/449 (50%), Gaps = 16/449 (3%)
Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
+ GKEV ++ +G +G+ L MY CG + ++ VF + + ++ WN +++ L
Sbjct: 111 KDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNEL 170
Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
++G + +I F M G+ +++ S +SL + G+Q+HG LK G
Sbjct: 171 AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERN 230
Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
SV N+L++ Y + KVF M E D +SWNS+I + S L + + ++ M
Sbjct: 231 SVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV-SNGLAEKGLSVFVQMLV 289
Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
+G + T +++ A + + LG VH+ +K + E N LL Y KCG++D
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDS 349
Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
+ +F MS+ R VS+ SMI+GY L +A+ L M + G D +T VL+ CA
Sbjct: 350 AKAVFREMSD-RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
L+ G VH L FD+ + +AL+DMY+KCG + A F M V+++ SWN+
Sbjct: 409 RYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNT 468
Query: 633 MISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
+I GY+++ + ++AL+LF+ + + PD T VL AC+ D+G ++
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG-------REI 521
Query: 692 YGLIPQLEQFS------CMVDLLGRAGEL 714
+G I + FS +VD+ + G L
Sbjct: 522 HGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Score = 180 bits (456), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 159/579 (27%), Positives = 270/579 (46%), Gaps = 44/579 (7%)
Query: 2 KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
KD K I +GF D L + L +Y GDL AS++FDE+ ++ W +++
Sbjct: 111 KDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNEL 170
Query: 62 THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
G + + +FK+M+ +G ++ Y V ++ G Q+H +LKS
Sbjct: 171 AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL--RSVHGGEQLHGFILKSGFGE 228
Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
V N L+A Y + D AR++F+E+ RD+ISWNSII+ Y G +F +M
Sbjct: 229 RNSVGNSLVAFYLKN-QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 287
Query: 182 QREGFRYSLKPNEYTFG--------SLITAAYSSVLSGSY-----LLQQILAMVKKAGLL 228
G L F SL A +S + + +L M K G L
Sbjct: 288 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 347
Query: 229 ----------SDLYVGS--ALVSGFARLGNFYYARKIFEQM----IQKNVVSMNGLME-- 270
SD V S ++++G+AR G A K+FE+M I +V ++ ++
Sbjct: 348 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 407
Query: 271 GRRK----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
R + GK VH ++ + L + V N L++MYAKCG++ ++ VF M KD +SWN
Sbjct: 408 ARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWN 467
Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLIS-TLSSCASLGWIMLGQQIHGEGLK 385
T+I G +N EA+ F + + S + ++ L +CASL G++IHG ++
Sbjct: 468 TIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMR 527
Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
G SD V+N+L+ +YA G L +F + D VSW +I + EA+
Sbjct: 528 NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYG-MHGFGKEAIA 586
Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSC 503
+ MR+AG + ++F+++L A S + G + ++++ E T+E+ ++
Sbjct: 587 LFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF-NIMRHECKIEPTVEHYACIVDM 645
Query: 504 YGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
+ G++ + M D W +++ G IH+++
Sbjct: 646 LARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDV 684
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 205/424 (48%), Gaps = 7/424 (1%)
Query: 326 NTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
NT + ++G E A+ C + + +L S L CA + G+++
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVK 445
G D ++ + L +Y + G L +VF + + WN ++ A S S ++
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDF-SGSIG 181
Query: 446 YYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
+ M +G + TF + + SS G Q+H ++K ++ N+L++ Y
Sbjct: 182 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 241
Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
K +D K+F M+E RD +SWNS+I+GY+ N L K +++ M+ G +D T
Sbjct: 242 KNQRVDSARKVFDEMTE-RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIV 300
Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
+V + CA + G VH+ GV+AC + + L+DMYSKCG +D A F M R
Sbjct: 301 SVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR 360
Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHF 685
+V S+ SMI+GYAR G +A+ LF +M+ +G PD T VL+ C+ L+DEG K
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG-KRV 419
Query: 686 KSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANC 745
+ L + + ++D+ + G + + E ++M + + + W T++G + NC
Sbjct: 420 HEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV-KDIISWNTIIGGYSK-NC 477
Query: 746 RKTE 749
E
Sbjct: 478 YANE 481
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust.
Identities = 304/936 (32%), Positives = 496/936 (52%), Gaps = 74/936 (7%)
Query: 58 VSGYTHKGMSNEACKMFKEMV------RAGFLLNRYALGSVLRACQECGPSGFKFGMQVH 111
+S + G +++ + +E V FLL R ALG +L+A + + G ++H
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGK--RKDIEMGRKIH 107
Query: 112 CLVLKSNQTF-DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGD 170
LV S + D ++ +I MY C S D +R +F+ + +++L WN++IS YS+
Sbjct: 108 QLVSGSTRLRNDDVLCTRIITMYAMC-GSPDDSRFVFDALRSKNLFQWNAVISSYSRNEL 166
Query: 171 TISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD 230
V + F M L P+ +T+ +I A G L + +V K GL+ D
Sbjct: 167 YDEVLETFIEMISTT---DLLPDHFTYPCVIKACAGMSDVGIGL--AVHGLVVKTGLVED 221
Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME-------------------- 270
++VG+ALVS + G A ++F+ M ++N+VS N ++
Sbjct: 222 VFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMME 281
Query: 271 ---------------------GRRK----GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
R + GK VHG+ ++ L + + N L++MY+KCG
Sbjct: 282 ENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCG 341
Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR-----DGLMSSNFSL 360
I +++ +F+ K+ VSWNTM+ G G + F +R+ + + + ++
Sbjct: 342 CITNAQMIFKMNNNKNVVSWNTMVGGFSAEG---DTHGTFDVLRQMLAGGEDVKADEVTI 398
Query: 361 ISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPE 420
++ + C ++ +++H LK + V+NA ++ YA G LS +VF +
Sbjct: 399 LNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRS 458
Query: 421 HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
SWN++IG A S ++ +L M+ +G P+ T ++L+A S +LG +
Sbjct: 459 KTVNSWNALIGGHAQSND-PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 517
Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
VH +I+ + + + ++LS Y CGE+ + +F M E + VSWN++I+GY+ N
Sbjct: 518 VHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM-EDKSLVSWNTVITGYLQNG 576
Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
+A+ + M+ G +L + V AC+ + +L G E HA ++ LE D I
Sbjct: 577 FPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIAC 636
Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
+L+DMY+K G I +S+ F+ + ++ SWN+MI GY HG +A+ LF +M+ G P
Sbjct: 637 SLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNP 696
Query: 661 DHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEF 720
D +TF+GVL+AC+H+GL+ EG ++ M +GL P L+ ++C++D+LGRAG+LDK
Sbjct: 697 DDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRV 756
Query: 721 I-NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASG 779
+ +M + IW+++L + CR + + E+G K A LFE+EP+ NYVLL+N+YA
Sbjct: 757 VAEEMSEEADVGIWKSLLSS-CRIH-QNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGL 814
Query: 780 GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKM 839
GKWEDV K R+ M E ++K+AGCSW+ + V FV G+ + I L K+
Sbjct: 815 GKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKI 874
Query: 840 RDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCH 898
GY P T DL E K + + HSEK+A+ + L + S+ IR+ KNLR+C DCH
Sbjct: 875 SKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCH 934
Query: 899 SAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
+A K ISK++ REIV+RD+ RFHHF +G CSCGDYW
Sbjct: 935 NAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 181/694 (26%), Positives = 312/694 (44%), Gaps = 65/694 (9%)
Query: 19 DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
D LC +I +Y G + +FD + +N W ++S Y+ + +E + F EM+
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 79 RAGFLL-NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCL 137
LL + + V++AC G S G+ VH LV+K+ D V N L++ YG+
Sbjct: 179 STTDLLPDHFTYPCVIKAC--AGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG 236
Query: 138 ESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
TD A ++F+ + R+L+SWNS+I V+S G + F L M E + P+ T
Sbjct: 237 FVTD-ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATL 295
Query: 198 GSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQM 257
+++ G L + + K L +L + +AL+ +++ G A+ IF+
Sbjct: 296 VTVLPVCAREREIG--LGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 353
Query: 258 IQKNVVSMNGLM-----EGRRKG------------------------------------- 275
KNVVS N ++ EG G
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 413
Query: 276 -KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
KE+H Y ++ V N V YAKCG++ ++ VF + K SWN +I G Q
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473
Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSV 394
+ ++ M+ GL+ +F++ S LS+C+ L + LG+++HG ++ L+ D+ V
Sbjct: 474 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 533
Query: 395 SNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
++LSLY G L +F M + VSWN+VI + + A+ + M G
Sbjct: 534 YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQN-GFPDRALGVFRQMVLYG 592
Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCE 514
G++ + + A S +LG + HA +K+ + ++ I +L+ Y K G +
Sbjct: 593 IQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSS 652
Query: 515 KIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASV 574
K+F + E + SWN+MI GY + L +A+ L M + G D TF VL+AC
Sbjct: 653 KVFNGLKE-KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHS 711
Query: 575 ATLERGMEV-----HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF--DLMPVRNV 627
+ G+ + G++ L+ + +DM + G++D A R ++ +V
Sbjct: 712 GLIHEGLRYLDQMKSSFGLKPNLKHYACV----IDMLGRAGQLDKALRVVAEEMSEEADV 767
Query: 628 YSWNSMISGYARHGH---GDKALTLFSQMKLDGP 658
W S++S H + G+K +++ + P
Sbjct: 768 GIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKP 801
Score = 204 bits (519), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 159/586 (27%), Positives = 278/586 (47%), Gaps = 64/586 (10%)
Query: 8 HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
H ++K G DVF+ N L++ Y G + A +LFD MP+RN VSW ++ ++ G S
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 68 NEACKMFKEMVR----AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
E+ + EM+ F+ + L +VL C G G VH +K +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL--GKGVHGWAVKLRLDKEL 327
Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
+++N L+ MY C T+ A+ IF+ ++++SWN+++ +S GDT F + +M
Sbjct: 328 VLNNALMDMYSKCGCITN-AQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386
Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
G +K +E T + + + S L+++ K + + V +A V+ +A+
Sbjct: 387 GG--EDVKADEVTILNAVPVCFHESFLPS--LKELHCYSLKQEFVYNELVANAFVASYAK 442
Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------------- 272
G+ YA+++F + K V S N L+ G
Sbjct: 443 CGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSL 502
Query: 273 ----------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
R GKEVHG++IR+ L + V ++++Y CG + +++F M K
Sbjct: 503 LSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSL 562
Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
VSWNT+I+G QNG + A+ F M G+ S++ +C+ L + LG++ H
Sbjct: 563 VSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAY 622
Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
LK L+ D ++ +L+ +YA G +++ KVF + E SWN++I + L E
Sbjct: 623 ALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG-IHGLAKE 681
Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-----IKYNVANETTIE 497
A+K + +M+R G +P+ +TF+ +L A + + G + Q+ +K N+ + +
Sbjct: 682 AIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVI 741
Query: 498 NALLSCYGKCGEMDDCEKIFA-RMSERRDEVSWNSMISG-YIHNEL 541
+ L G+ G++D ++ A MSE D W S++S IH L
Sbjct: 742 DML----GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNL 783
Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 25/326 (7%)
Query: 4 AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
K H I+++ D+F+ +++++Y+ G+L + LFD M D++ VSW +++GY
Sbjct: 515 GKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQ 574
Query: 64 KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
G + A +F++MV G L ++ V AC PS + G + H LK D
Sbjct: 575 NGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLL-PS-LRLGREAHAYALKHLLEDDA 632
Query: 124 LVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
++ LI MY GS +S+ ++F ++ + SWN++I Y G KLF
Sbjct: 633 FIACSLIDMYAKNGSITQSS----KVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEE 688
Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALV 238
MQR G P++ TF ++TA S L G L Q M GL +L + ++
Sbjct: 689 MQRTGH----NPDDLTFLGVLTACNHSGLIHEGLRYLDQ---MKSSFGLKPNLKHYACVI 741
Query: 239 SGFARLGNFYYA-RKIFEQMIQKNVVSM-NGLMEGRRKGKEVH-GYLIRSGLFDMVAVGN 295
R G A R + E+M ++ V + L+ R + + G + + LF++
Sbjct: 742 DMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKP 801
Query: 296 G----LVNMYAKCGTIDDSRSVFRFM 317
L N+YA G +D R V + M
Sbjct: 802 ENYVLLSNLYAGLGKWEDVRKVRQRM 827
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 15/270 (5%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
K H LK F Y+ + N + Y + G L+ A ++F + + SW ++ G+
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474
Query: 65 GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
+ +M +G L + + + S+L AC + + G +VH ++++ D
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL--KSLRLGKEVHGFIIRNWLERDLF 532
Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
V ++++Y C E + +F+ +E + L+SWN++I+ Y Q G +F +M
Sbjct: 533 VYLSVLSLYIHCGELC-TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLY 591
Query: 185 GFRY---SLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
G + S+ P FG+ S+L L ++ A K L D ++ +L+ +
Sbjct: 592 GIQLCGISMMP---VFGA------CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 642
Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
A+ G+ + K+F + +K+ S N ++ G
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTASWNAMIMG 672
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 485 bits (1248), Expect = e-136, Method: Compositional matrix adjust.
Identities = 300/872 (34%), Positives = 464/872 (53%), Gaps = 60/872 (6%)
Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI-ETRDLISWNSIISVYSQ 167
++H LV+ S LI Y E + +F + +++ WNSII +S+
Sbjct: 25 RIHALVISLGLDSSDFFSGKLIDKYSHFREPAS-SLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 168 RGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYS--SVLSGSYLLQQILAMVKKA 225
G + + +++ + P++YTF S+I A G + +QIL M
Sbjct: 84 NGLFPEALEFYGKLRES----KVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDM---- 135
Query: 226 GLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR------------- 272
G SDL+VG+ALV ++R+G AR++F++M +++VS N L+ G
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195
Query: 273 ----------------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
++G+ +HG+ ++SG+ +V V NGLV MY K
Sbjct: 196 HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKF 255
Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
D+R VF M +DSVS+NTMI G + EE++ F D ++ S L
Sbjct: 256 RRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVL 314
Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
+C L + L + I+ LK G + +V N L+ +YA G + VF M D V
Sbjct: 315 RACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTV 374
Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
SWNS+I + S L+ EA+K + M + +T++ +++ ++ + K G +H+
Sbjct: 375 SWNSIISGYIQSGDLM-EAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSN 433
Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
IK + + ++ NAL+ Y KCGE+ D KIF+ M D V+WN++IS +
Sbjct: 434 GIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVISACVRFGDFAT 492
Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
+ + M + D TF L CAS+A G E+H C +R E ++ IG+AL++
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552
Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVT 664
MYSKCG ++ +SR F+ M R+V +W MI Y +G G+KAL F+ M+ G +PD V
Sbjct: 553 MYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVV 612
Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
F+ ++ ACSH+GLVDEG F+ M Y + P +E ++C+VDLL R+ ++ K EEFI M
Sbjct: 613 FIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAM 672
Query: 725 PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
PI P++ IW +VL AC + E + + + E+ P + +L +N YA+ KW+
Sbjct: 673 PIKPDASIWASVLRACRTSG--DMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDK 730
Query: 785 VAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGY 844
V+ RK++K+ + K G SW+ + VHVF +GD+S P+ + IY+ L+ L M GY
Sbjct: 731 VSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGY 790
Query: 845 VPQTKFALFDL-EPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFK 902
+P + +L E E K L+ HSE++A+AF +L P+++MKNLRVCGDCH K
Sbjct: 791 IPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTK 850
Query: 903 FISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
ISKIVGREI++RD+NRFH F DG CSC D W
Sbjct: 851 LISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 155/509 (30%), Positives = 253/509 (49%), Gaps = 58/509 (11%)
Query: 6 LFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKG 65
L + QIL GF D+F+ N L+++Y R+G L A ++FDEMP R+ VSW ++SGY+ G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 66 MSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLV 125
EA +++ E+ + + + + + SVL A K G +H LKS +V
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNL--LVVKQGQGLHGFALKSGVNSVVVV 244
Query: 126 SNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREG 185
+N L+AMY TD ARR+F+E++ RD +S+N++I Y + + + + RM E
Sbjct: 245 NNGLVAMYLKFRRPTD-ARRVFDEMDVRDSVSYNTMICGYLK----LEMVEESVRMFLEN 299
Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
KP+ T S++ A L L + I + KAG + + V + L+ +A+ G
Sbjct: 300 LD-QFKPDLLTVSSVLRAC--GHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCG 356
Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGR--------------------------------- 272
+ AR +F M K+ VS N ++ G
Sbjct: 357 DMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLIS 416
Query: 273 --------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
+ GK +H I+SG+ ++V N L++MYAKCG + DS +F M D+V+
Sbjct: 417 VSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVT 476
Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
WNT+IS + G + + MR+ ++ + + TL CASL LG++IH L
Sbjct: 477 WNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL 536
Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI---GAFADSEALVS 441
+ G +S++ + NAL+ +Y+ G L +VF M D V+W +I G + + E
Sbjct: 537 RFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGE---- 592
Query: 442 EAVKYYLDMRRAGWSPNGVTFINILAAAS 470
+A++ + DM ++G P+ V FI I+ A S
Sbjct: 593 KALETFADMEKSGIVPDSVVFIAIIYACS 621
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 203/445 (45%), Gaps = 43/445 (9%)
Query: 26 LINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLN 85
L+ +Y++ A ++FDEM R+SVS+ ++ GY M E+ +MF E + F +
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPD 306
Query: 86 RYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARR 145
+ SVLRAC ++ +LK+ + V N+LI +Y C + AR
Sbjct: 307 LLTVSSVLRACGHL--RDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMI-TARD 363
Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-----QREGFRY------SLKPNE 194
+F +E +D +SWNSIIS Y Q GD + KLF M Q + Y S + +
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 195 YTFG-----SLITAAYSSVLSGSYLLQQILAMVKKAG----LLSDLYVG-----SALVSG 240
FG + I + LS S L + A + G + S + G + ++S
Sbjct: 424 LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISA 483
Query: 241 FARLGNFYYARKIFEQMIQKNVV----------SMNGLMEGRRKGKEVHGYLIRSGLFDM 290
R G+F ++ QM + VV M + +R GKE+H L+R G
Sbjct: 484 CVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESE 543
Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
+ +GN L+ MY+KCG +++S VF M +D V+W MI G E+A+ F M +
Sbjct: 544 LQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEK 603
Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN--ALLSLYADAGYL 408
G++ + I+ + +C+ G + G E +K D + + ++ L + + +
Sbjct: 604 SGIVPDSVVFIAIIYACSHSGLVDEGLACF-EKMKTHYKIDPMIEHYACVVDLLSRSQKI 662
Query: 409 SRCLKVFFLMP-EHDQVSWNSVIGA 432
S+ + MP + D W SV+ A
Sbjct: 663 SKAEEFIQAMPIKPDASIWASVLRA 687
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 208/415 (50%), Gaps = 14/415 (3%)
Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF-FLMPEHD 422
LSS ++L + ++IH + LGLDS S L+ Y+ + L VF + P +
Sbjct: 14 LSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKN 70
Query: 423 QVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVH 482
WNS+I AF+ + L EA+++Y +R + SP+ TF +++ A + ++G V+
Sbjct: 71 VYLWNSIIRAFSKN-GLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 483 AQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELL 542
Q++ ++ + NAL+ Y + G + ++F M RD VSWNS+ISGY +
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPV-RDLVSWNSLISGYSSHGYY 188
Query: 543 PKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
+A+ + + D FT ++VL A ++ +++G +H +++ + VV+ + L
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGL 248
Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDH 662
V MY K R A R FD M VR+ S+N+MI GY + ++++ +F + LD PD
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDL 307
Query: 663 VTFVGVLSACSHAGLVDEGF-KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
+T VL AC H L D K+ + G + + + ++D+ + G++ +
Sbjct: 308 LTVSSVLRACGH--LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365
Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ-NAVNYVLLANM 775
N M +++ W +++ ++ + K M+ ME Q + + Y++L ++
Sbjct: 366 NSME-CKDTVSWNSIISGYIQSGDLMEAM--KLFKMMMIMEEQADHITYLMLISV 417
Score = 123 bits (308), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 117/215 (54%), Gaps = 1/215 (0%)
Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
A +SS ++ +L ++HA VI + + L+ Y E +F R+S ++
Sbjct: 13 ALSSSSNLNEL-RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
WNS+I + N L P+A+ + + D +TF +V+ ACA + E G V+
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
+ E D+ +G+ALVDMYS+ G + A + FD MPVR++ SWNS+ISGY+ HG+ ++A
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 647 LTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG 681
L ++ ++K +PD T VL A + +V +G
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 165/323 (51%), Gaps = 21/323 (6%)
Query: 4 AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
AK + +LK GF + + N LI+VY + GD+ +A +F+ M +++VSW I+SGY
Sbjct: 326 AKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQ 385
Query: 64 KGMSNEACKMFKEMVRAGFLLNRYA--LGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
G EA K+FK M+ ++ A + ++ + KFG +H +KS
Sbjct: 386 SGDLMEAMKLFKMMM----IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICI 441
Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
D VSN LI MY C E D + +IF + T D ++WN++IS + GD + ++ ++M
Sbjct: 442 DLSVSNALIDMYAKCGEVGD-SLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQM 500
Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
++ + P+ TF L+T + L+ L ++I + + G S+L +G+AL+ +
Sbjct: 501 RKS----EVVPDMATF--LVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMY 554
Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLM-------EGRRKGKEVHGYLIRSGLFDMVAVG 294
++ G + ++FE+M +++VV+ G++ EG K E + +SG+ V
Sbjct: 555 SKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEG-EKALETFADMEKSGIVPDSVVF 613
Query: 295 NGLVNMYAKCGTIDDSRSVFRFM 317
++ + G +D+ + F M
Sbjct: 614 IAIIYACSHSGLVDEGLACFEKM 636
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 11/210 (5%)
Query: 2 KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
K K H +K G D+ + N LI++Y + G++ + K+F M ++V+W ++S
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISAC 484
Query: 62 THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
G ++ +M ++ + + L C + G ++HC +L+
Sbjct: 485 VRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK--RLGKEIHCCLLRFGYES 542
Query: 122 DGLVSNVLIAMYGS--CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFS 179
+ + N LI MY CLE++ R+FE + RD+++W +I Y G+ + F+
Sbjct: 543 ELQIGNALIEMYSKCGCLENSS---RVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFA 599
Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVL 209
M++ G + P+ F ++I A S L
Sbjct: 600 DMEKSG----IVPDSVVFIAIIYACSHSGL 625
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 479 bits (1233), Expect = e-134, Method: Compositional matrix adjust.
Identities = 268/716 (37%), Positives = 413/716 (57%), Gaps = 19/716 (2%)
Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQM-----IQKNVVSMNGLMEGRRK---GKEVHGY 281
D+Y + ++SG+ R GN + F + + + +++ R G ++H
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCL 175
Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
++ G V V L+++Y++ + ++R +F M +D SWN MISG Q+G +EA
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
+ +R + +++S LS+C G G IH +K GL+S++ VSN L+ L
Sbjct: 236 LTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291
Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
YA+ G L C KVF M D +SWNS+I A+ +E + A+ + +MR + P+ +T
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL-RAISLFQEMRLSRIQPDCLT 350
Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYN-VANETTIENALLSCYGKCGEMDDCEKIFARM 520
I++ + S + V ++ + TI NA++ Y K G +D +F +
Sbjct: 351 LISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 410
Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQ-RLDHFTFATVLSACASVATLER 579
D +SWN++ISGY N +A+ + M + G+ + T+ +VL AC+ L +
Sbjct: 411 PNT-DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
GM++H ++ L DV + ++L DMY KCGR++ A F +P N WN++I+ +
Sbjct: 470 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGF 529
Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
HGHG+KA+ LF +M +G PDH+TFV +LSACSH+GLVDEG F+ M YG+ P L+
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589
Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
+ CMVD+ GRAG+L+ +FI M + P++ IW +L A CR + +LG+ A+ LF
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA-CRVH-GNVDLGKIASEHLF 647
Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
E+EP++ +VLL+NMYAS GKWE V + R ++K G S + + + V VF G+
Sbjct: 648 EVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGN 707
Query: 820 ESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTR 879
++HP + +Y +L L K++ GYVP +F L D+E + KE ++ HSE++A+AF L
Sbjct: 708 QTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIA 767
Query: 880 N-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
+K IRI KNLRVCGDCHS KFISKI REI++RDSNRFHHF +G CSCGDYW
Sbjct: 768 TPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 214 bits (545), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 159/585 (27%), Positives = 273/585 (46%), Gaps = 74/585 (12%)
Query: 2 KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
+ AK H +++ +V + L+N+Y +G++A A FD + +R+ +W ++SGY
Sbjct: 68 QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGY 127
Query: 62 THKGMSNEACKMFKE-MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
G S+E + F M+ +G + SVL+AC+ G ++HCL LK
Sbjct: 128 GRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID-----GNKIHCLALKFGFM 182
Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
+D V+ LI +Y S ++ AR +F+E+ RD+ SWN++IS Y Q G+ L
Sbjct: 183 WDVYVAASLIHLY-SRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL--- 238
Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSS------VLSGSYLLQQILAMVKKAGLLSDLYVG 234
G R + T SL++A + V SY + K GL S+L+V
Sbjct: 239 --SNGLR---AMDSVTVVSLLSACTEAGDFNRGVTIHSYSI--------KHGLESELFVS 285
Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR---------------------- 272
+ L+ +A G +K+F++M ++++S N +++
Sbjct: 286 NKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ 345
Query: 273 -------------------RKGKEVHGYLIRSGLF-DMVAVGNGLVNMYAKCGTIDDSRS 312
R + V G+ +R G F + + +GN +V MYAK G +D +R+
Sbjct: 346 PDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARA 405
Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF-SLISTLSSCASLG 371
VF ++ D +SWNT+ISG QNG EAI + M +G +++N + +S L +C+ G
Sbjct: 406 VFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAG 465
Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
+ G ++HG LK GL DV V +L +Y G L L +F+ +P + V WN++I
Sbjct: 466 ALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIA 525
Query: 432 AFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQV-IKYNV 490
+AV + +M G P+ +TF+ +L+A S + G + Y +
Sbjct: 526 CHG-FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGI 584
Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
++ YG+ G+++ K MS + D W +++S
Sbjct: 585 TPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 155/524 (29%), Positives = 256/524 (48%), Gaps = 32/524 (6%)
Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
+ K +H L+ S V + LVN+Y G + +R F + +D +WN MISG
Sbjct: 68 QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGY 127
Query: 333 DQNGCYEEAIMNFCA-MRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
+ G E I F M GL + S L +C + ++ G +IH LK G D
Sbjct: 128 GRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT---VIDGNKIHCLALKFGFMWD 184
Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
V V+ +L+ LY+ + +F MP D SWN++I + S EA+ +R
Sbjct: 185 VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS-GNAKEALTLSNGLR 243
Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD 511
+ + VT +++L+A + G +H+ IK+ + +E + N L+ Y + G +
Sbjct: 244 ----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSAC 571
DC+K+F RM RD +SWNS+I Y NE +A++L M + D T ++ S
Sbjct: 300 DCQKVFDRMYV-RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASIL 358
Query: 572 ASVATLERGMEVHACGVRA--CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
+ + + V +R LE D+ IG+A+V MY+K G +D A F+ +P +V S
Sbjct: 359 SQLGDIRACRSVQGFTLRKGWFLE-DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVIS 417
Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDEGFK-HFKS 687
WN++ISGYA++G +A+ +++ M+ +G + + T+V VL ACS AG + +G K H +
Sbjct: 418 WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL 477
Query: 688 MSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK 747
+ GL + + + D+ G+ G L+ ++P NS+ W T++ AC +
Sbjct: 478 LKN--GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRV-NSVPWNTLI-ACHGFHGH- 532
Query: 748 TELGRKAANMLFEM-----EPQNAVNYVLLANMYASG----GKW 782
G KA + EM +P + LL+ SG G+W
Sbjct: 533 ---GEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573
Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 150/328 (45%), Gaps = 22/328 (6%)
Query: 13 KHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACK 72
K F D+ + N ++ +Y ++G + SA +F+ +P+ + +SW I+SGY G ++EA +
Sbjct: 377 KGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIE 436
Query: 73 MFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
M+ M G + N+ SVL AC + G + GM++H +LK+ D V L
Sbjct: 437 MYNIMEEEGEIAANQGTWVSVLPACSQAG--ALRQGMKLHGRLLKNGLYLDVFVVTSLAD 494
Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
MYG C D A +F +I + + WN++I+ + G LF M EG +K
Sbjct: 495 MYGKCGRLED-ALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG----VK 549
Query: 192 PNEYTFGSLITAAYSSVL--SGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYY 249
P+ TF +L++A S L G + + M G+ L +V + R G
Sbjct: 550 PDHITFVTLLSACSHSGLVDEGQWCFEM---MQTDYGITPSLKHYGCMVDMYGRAGQLET 606
Query: 250 ARKIFEQMIQKNVVSMNG--LMEGRRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAK 303
A K + M + S+ G L R G G + LF++ G L NMYA
Sbjct: 607 ALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYAS 666
Query: 304 CGT---IDDSRSVFRFMIGKDSVSWNTM 328
G +D+ RS+ + + W++M
Sbjct: 667 AGKWEGVDEIRSIAHGKGLRKTPGWSSM 694
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 474 bits (1221), Expect = e-133, Method: Compositional matrix adjust.
Identities = 265/715 (37%), Positives = 395/715 (55%), Gaps = 49/715 (6%)
Query: 267 GLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
G + R G+ H + +G V VGN LV MY++C ++ D+R VF M D VSWN
Sbjct: 138 GEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWN 197
Query: 327 TMISGLDQNGCYEEAIMNFCAMRRD-GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK 385
++I + G + A+ F M + G N +L++ L CASLG LG+Q+H +
Sbjct: 198 SIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVT 257
Query: 386 LGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSV------IGAFADSEAL 439
+ ++ V N L+ +YA G + VF M D VSWN++ IG F D+ L
Sbjct: 258 SEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRL 317
Query: 440 VSEAVKYYLDMRRAGWS----------------------------PNGVTFINILAAASS 471
+ + + M WS PN VT I++L+ +S
Sbjct: 318 FEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCAS 377
Query: 472 FSMGKLGHQVHAQVIKYNV-------ANETTIENALLSCYGKCGEMDDCEKIFARMSER- 523
G ++H IKY + +E + N L+ Y KC ++D +F +S +
Sbjct: 378 VGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE 437
Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG--QRLDHFTFATVLSACASVATLERGM 581
RD V+W MI GY + KA+ L+ M + R + FT + L ACAS+A L G
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGK 497
Query: 582 EVHACGVRACLE-FDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
++HA +R + + + L+DMY+KCG I A FD M +N +W S+++GY H
Sbjct: 498 QIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMH 557
Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQ 700
G+G++AL +F +M+ G D VT + VL ACSH+G++D+G ++F M V+G+ P E
Sbjct: 558 GYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEH 617
Query: 701 FSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFE 760
++C+VDLLGRAG L+ I +MP+ P ++W L +CCR + K ELG AA + E
Sbjct: 618 YACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFL-SCCRIH-GKVELGEYAAEKITE 675
Query: 761 MEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDE 820
+ + +Y LL+N+YA+ G+W+DV + R M+ VKK GCSWV G F GD+
Sbjct: 676 LASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDK 735
Query: 821 SHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTR 879
+HP IY+ L + Q+++D GYVP+T FAL D++ E K+DL+ HSEK+A+A+ +LT
Sbjct: 736 THPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTT 795
Query: 880 NSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
IRI KNLRVCGDCH+AF ++S+I+ +I+LRDS+RFHHF +G CSC YW
Sbjct: 796 PQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 187/665 (28%), Positives = 303/665 (45%), Gaps = 76/665 (11%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP--DRNSVSWACIVSGYT 62
KL H ++L G + L + LI+ Y+ VG L+ A L P D W ++ Y
Sbjct: 45 KLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYG 103
Query: 63 HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
G +N+ +F M + + Y V +AC E S + G H L L + +
Sbjct: 104 DNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEI--SSVRCGESAHALSLVTGFISN 161
Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
V N L+AMY C +D AR++F+E+ D++SWNSII Y++ G ++FSRM
Sbjct: 162 VFVGNALVAMYSRCRSLSD-ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT 220
Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
E + +P+ T +++ S L L +Q+ + ++ +++VG+ LV +A
Sbjct: 221 NE---FGCRPDNITLVNVLPPCAS--LGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYA 302
+ G A +F M K+VVS N ++ G Y+
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAG-----------------------------YS 306
Query: 303 KCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNF 358
+ G +D+ +F M I D V+W+ ISG Q G EA+ M G+ +
Sbjct: 307 QIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEV 366
Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLD-------SDVSVSNALLSLYADAGYLSRC 411
+LIS LS CAS+G +M G++IH +K +D + V N L+ +YA +
Sbjct: 367 TLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTA 426
Query: 412 LKVF-FLMP-EHDQVSWNSVIGAFAD------SEALVSEAVKYYLDMRRAGWSPNGVTFI 463
+F L P E D V+W +IG ++ + L+SE + R PN T
Sbjct: 427 RAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTR-----PNAFTIS 481
Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETT--IENALLSCYGKCGEMDDCEKIFARMS 521
L A +S + ++G Q+HA ++ N N + N L+ Y KCG + D +F M
Sbjct: 482 CALVACASLAALRIGKQIHAYALR-NQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMM 540
Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGM 581
++EV+W S+++GY + +A+ + M + G +LD T VL AC+ +++GM
Sbjct: 541 A-KNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGM 599
Query: 582 EVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISG 636
E R F V G + LVD+ + GR++ A R + MP+ W + +S
Sbjct: 600 EYFN---RMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSC 656
Query: 637 YARHG 641
HG
Sbjct: 657 CRIHG 661
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 160/317 (50%), Gaps = 9/317 (2%)
Query: 364 LSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQ 423
+ C ++ + L IH + L G+ + +++++ L+S Y G LS + + P D
Sbjct: 35 IHKCKTISQVKL---IHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDA 90
Query: 424 --VSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
WNS+I ++ D+ ++ + + M W+P+ TF + A S + G
Sbjct: 91 GVYHWNSLIRSYGDN-GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESA 149
Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
HA + + + NAL++ Y +C + D K+F MS D VSWNS+I Y
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVW-DVVSWNSIIESYAKLGK 208
Query: 542 LPKAMNLVWFMMQR-GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGS 600
A+ + M G R D+ T VL CAS+ T G ++H V + + ++ +G+
Sbjct: 209 PKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 268
Query: 601 ALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLP 660
LVDMY+KCG +D A+ F M V++V SWN+M++GY++ G + A+ LF +M+ +
Sbjct: 269 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 328
Query: 661 DHVTFVGVLSACSHAGL 677
D VT+ +S + GL
Sbjct: 329 DVVTWSAAISGYAQRGL 345
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 197/460 (42%), Gaps = 75/460 (16%)
Query: 19 DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMF---- 74
++F+ N L+++Y + G + A+ +F M ++ VSW +V+GY+ G +A ++F
Sbjct: 263 NMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQ 322
Query: 75 -------------------------------KEMVRAGFLLNRYALGSVLRACQECGPSG 103
++M+ +G N L SVL C G
Sbjct: 323 EEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVG--A 380
Query: 104 FKFGMQVHCLVL-------KSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI--ETRD 154
G ++HC + K+ + +V N LI MY C + D AR +F+ + + RD
Sbjct: 381 LMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC-KKVDTARAMFDSLSPKERD 439
Query: 155 LISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL 214
+++W +I YSQ GD +L S M E + +PN +T + A S L+ +
Sbjct: 440 VVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ--TRPNAFTISCALVACAS--LAALRI 495
Query: 215 LQQILA-MVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRR 273
+QI A ++ L+V + L+ +A+ G+ AR +F+ M+ KN V+ LM G
Sbjct: 496 GKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGY- 554
Query: 274 KGKEVHGYLIRS-GLFD-MVAVG------NGLVNMYA--KCGTIDDSRSVFR-----FMI 318
+HGY + G+FD M +G LV +YA G ID F F +
Sbjct: 555 ---GMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGV 611
Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
+ ++ L + G A+ M + ++ LS C G + LG+
Sbjct: 612 SPGPEHYACLVDLLGRAGRLNAALRLIEEMPME---PPPVVWVAFLSCCRIHGKVELGEY 668
Query: 379 IHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
+ +L + D S + L +LYA+AG ++ LM
Sbjct: 669 AAEKITELASNHDGSYT-LLSNLYANAGRWKDVTRIRSLM 707
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 156/370 (42%), Gaps = 55/370 (14%)
Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV-SWNSMISGYIHN 539
+H +++ + + + + L+S Y G + + R V WNS+I Y N
Sbjct: 47 IHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDN 105
Query: 540 ELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG 599
K + L M D++TF V AC ++++ G HA + +V +G
Sbjct: 106 GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVG 165
Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD-GP 658
+ALV MYS+C + A + FD M V +V SWNS+I YA+ G AL +FS+M + G
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIE 718
PD++T V VL C+ G G K + +I + +C+VD+ + G +D+
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLG-KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDE-- 282
Query: 719 EFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF-EMEPQNAVNYVLLANMYA 777
AN +F M ++ V++ + Y+
Sbjct: 283 ------------------------------------ANTVFSNMSVKDVVSWNAMVAGYS 306
Query: 778 SGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQ 837
G++ED + + M+E ++K + V + A + ++ L YE L Q
Sbjct: 307 QIGRFEDAVRLFEKMQEEKIKMD-----------VVTWSAAISGYAQRGLGYEALGVCRQ 355
Query: 838 KMRDAGYVPQ 847
M +G P
Sbjct: 356 -MLSSGIKPN 364
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 474 bits (1219), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/574 (40%), Positives = 364/574 (63%), Gaps = 6/574 (1%)
Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
+ L C ++ G+ +H L+ D+ + N LL++YA G L KVF MP+
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
D V+W ++I ++ + +A+ ++ M R G+SPN T +++ AA++ G GHQ+
Sbjct: 125 DFVTWTTLISGYSQHDR-PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
H +K + + +ALL Y + G MDD + +F + E R++VSWN++I+G+
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL-ESRNDVSWNALIAGHARRSG 242
Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA 601
KA+ L M++ G R HF++A++ AC+S LE+G VHA +++ + G+
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 602 LVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPD 661
L+DMY+K G I A + FD + R+V SWNS+++ YA+HG G +A+ F +M+ G P+
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 662 HVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFI 721
++F+ VL+ACSH+GL+DEG+ +++ M + G++P+ + +VDLLGRAG+L++ FI
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 722 NKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGK 781
+MPI P + IW+ +L A CR + + TELG AA +FE++P + +V+L N+YASGG+
Sbjct: 422 EEMPIEPTAAIWKALLNA-CRMH-KNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 479
Query: 782 WEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRD 841
W D A+ RK MKE+ VKKE CSWV +++ +H+FVA DE HP+++ I K +E+ K+++
Sbjct: 480 WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 539
Query: 842 AGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSA 900
GYVP T + ++ + +E + YHSEKIA+AF L I I KN+RVCGDCH+A
Sbjct: 540 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTA 599
Query: 901 FKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
K SK+VGREI++RD+NRFHHF DG CSC DYW
Sbjct: 600 IKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 218/433 (50%), Gaps = 15/433 (3%)
Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
G++ A + F + K L++GR VH ++++S + +GN L+NMYAKC
Sbjct: 53 GSYIPADRRFYNTLLKKCTVFKLLIQGRI----VHAHILQSIFRHDIVMGNTLLNMYAKC 108
Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
G+++++R VF M +D V+W T+ISG Q+ +A++ F M R G + F+L S +
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
+ A+ G Q+HG +K G DS+V V +ALL LY G + VF + + V
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
SWN++I A +A++ + M R G+ P+ ++ ++ A SS + G VHA
Sbjct: 229 SWNALIAGHARRSG-TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAY 287
Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
+IK N LL Y K G + D KIF R++ +RD VSWNS+++ Y + +
Sbjct: 288 MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKE 346
Query: 545 AMNLVWF--MMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSAL 602
A + WF M + G R + +F +VL+AC+ L+ G + + + + +
Sbjct: 347 A--VWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTV 404
Query: 603 VDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISGYARHGH---GDKALTLFSQMKLDGP 658
VD+ + G ++ A RF + MP+ + W ++++ H + G A ++ D P
Sbjct: 405 VDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDP 464
Query: 659 LPDHVTFVGVLSA 671
P HV + ++
Sbjct: 465 GP-HVILYNIYAS 476
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 187/393 (47%), Gaps = 57/393 (14%)
Query: 85 NRYALGSVLRACQECGPSGFKFGMQ---VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD 141
+R ++L+ C + FK +Q VH +L+S D ++ N L+ MY C S +
Sbjct: 59 DRRFYNTLLKKC-----TVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC-GSLE 112
Query: 142 CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLI 201
AR++FE++ RD ++W ++IS YSQ F++M R G+ PNE+T S+I
Sbjct: 113 EARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGY----SPNEFTLSSVI 168
Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
AA + Q+ K G S+++VGSAL+ + R G A+ +F+ + +N
Sbjct: 169 KAAAAE--RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRN 226
Query: 262 VVSMNGLMEG--RRKGKE---------------------------------------VHG 280
VS N L+ G RR G E VH
Sbjct: 227 DVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHA 286
Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
Y+I+SG + GN L++MYAK G+I D+R +F + +D VSWN++++ Q+G +E
Sbjct: 287 YMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKE 346
Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
A+ F MRR G+ + S +S L++C+ G + G + K G+ + ++
Sbjct: 347 AVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVD 406
Query: 401 LYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
L AG L+R L+ MP E W +++ A
Sbjct: 407 LLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 155/313 (49%), Gaps = 17/313 (5%)
Query: 12 LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
+K GF +V + + L+++Y R G + A +FD + RN VSW +++G+ + + +A
Sbjct: 188 VKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKAL 247
Query: 72 KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
++F+ M+R GF + ++ S+ AC G + G VH ++KS + N L+
Sbjct: 248 ELFQGMLRDGFRPSHFSYASLFGACSSTG--FLEQGKWVHAYMIKSGEKLVAFAGNTLLD 305
Query: 132 MYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLK 191
MY D AR+IF+ + RD++SWNS+++ Y+Q G F M+R G R
Sbjct: 306 MYAKSGSIHD-ARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR---- 360
Query: 192 PNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
PNE +F S++TA ++S +L + +++ KK G++ + + +V R G+ A
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELM---KKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 251 RKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAKC 304
+ E+M I+ L+ R K G +F++ G L N+YA
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 305 GTIDDSRSVFRFM 317
G +D+ V + M
Sbjct: 478 GRWNDAARVRKKM 490
Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 65/114 (57%)
Query: 560 DHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFF 619
D + T+L C L +G VHA +++ D+V+G+ L++MY+KCG ++ A + F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 620 DLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS 673
+ MP R+ +W ++ISGY++H AL F+QM G P+ T V+ A +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%)
Query: 2 KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
+ K H ++K G F NTL+++Y + G + A K+FD + R+ VSW +++ Y
Sbjct: 279 EQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAY 338
Query: 62 THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
G EA F+EM R G N + SVL AC G
Sbjct: 339 AQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 473 bits (1217), Expect = e-132, Method: Compositional matrix adjust.
Identities = 276/768 (35%), Positives = 405/768 (52%), Gaps = 59/768 (7%)
Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG--- 271
L Q A + G +D+ + + L + LG YYAR IF + + +V N LM G
Sbjct: 36 LAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSV 95
Query: 272 ---------------------------------------RRKGKEVHGYLIRSGLFDMVA 292
R G+ +HG + G +
Sbjct: 96 NESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELL 155
Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
+G+ +V MY K ++D+R VF M KD++ WNTMISG +N Y E+I F RD
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF----RDL 211
Query: 353 LMSS-----NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
+ S +L+ L + A L + LG QIH K G S V +SLY+ G
Sbjct: 212 INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
+ +F + D V++N++I + S ++ + ++ +G T ++++
Sbjct: 272 IKMGSALFREFRKPDIVAYNAMIHGYT-SNGETELSLSLFKELMLSGARLRSSTLVSLVP 330
Query: 468 AASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
+ L + +H +K N + ++ AL + Y K E++ K+F S +
Sbjct: 331 VSGHL---MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE-SPEKSLP 386
Query: 528 SWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACG 587
SWN+MISGY N L A++L M + + T +LSACA + L G VH
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV 446
Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKAL 647
E + + +AL+ MY+KCG I A R FDLM +N +WN+MISGY HG G +AL
Sbjct: 447 RSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEAL 506
Query: 648 TLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDL 707
+F +M G P VTF+ VL ACSHAGLV EG + F SM YG P ++ ++CMVD+
Sbjct: 507 NIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDI 566
Query: 708 LGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAV 767
LGRAG L + +FI M I P S +W T+LGA CR + + T L R + LFE++P N
Sbjct: 567 LGRAGHLQRALQFIEAMSIEPGSSVWETLLGA-CRIH-KDTNLARTVSEKLFELDPDNVG 624
Query: 768 NYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDL 827
+VLL+N++++ + A R+ K+ ++ K G + + + + HVF +GD+SHP+
Sbjct: 625 YHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKE 684
Query: 828 IYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIR 886
IYEKL++L KMR+AGY P+T+ AL D+E E +E +V HSE++A+AF ++ IR
Sbjct: 685 IYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIR 744
Query: 887 IMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
I+KNLRVC DCH+ K ISKI R IV+RD+NRFHHF DG CSCGDYW
Sbjct: 745 IIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 213/477 (44%), Gaps = 60/477 (12%)
Query: 2 KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
+ ++ H Q + G ++ L + ++ +Y + + A K+FD MP+++++ W ++SGY
Sbjct: 136 RAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGY 195
Query: 62 THKGMSNEACKMFKEMVRAGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
M E+ ++F++++ L+ L +L A E + GMQ+H L K+
Sbjct: 196 RKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL--QELRLGMQIHSLATKTGCY 253
Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
V I++Y C +F E D++++N++I Y+ G+T LF
Sbjct: 254 SHDYVLTGFISLYSKC-GKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKE 312
Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL-QQILAMVKKAGLLSDLYVGSALVS 239
+ G R T SL+ +SG +L I K+ LS V +AL +
Sbjct: 313 LMLSGARL----RSSTLVSLVP------VSGHLMLIYAIHGYCLKSNFLSHASVSTALTT 362
Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------- 274
+++L ARK+F++ +K++ S N ++ G +
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422
Query: 275 ----------------GKEVHGYLIRSGLFD-MVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
GK VH L+RS F+ + V L+ MYAKCG+I ++R +F M
Sbjct: 423 ITCILSACAQLGALSLGKWVHD-LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
K+ V+WNTMISG +G +EA+ F M G+ + + + L +C+ G + G
Sbjct: 482 TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGD 541
Query: 378 QIHGEGL-KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
+I + + G + V ++ + AG+L R L+ M E W +++GA
Sbjct: 542 EIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGA 598
Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 127/568 (22%), Positives = 239/568 (42%), Gaps = 53/568 (9%)
Query: 8 HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
H QI+ HGF D+ L L +G + A +F + + + ++ G++
Sbjct: 40 HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99
Query: 68 NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGF---KFGMQVHCLVLKSNQTFDGL 124
+ + +F + ++ L S A SGF + G +H + + L
Sbjct: 100 HSSLSVFAHLRKSTDL----KPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELL 155
Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
+ + ++ MY D AR++F+ + +D I WN++IS Y + + ++F + E
Sbjct: 156 LGSNIVKMYFKFWRVED-ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINE 214
Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
+ + T ++ A + L L QI ++ K G S YV + +S +++
Sbjct: 215 S---CTRLDTTTLLDILPAV--AELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKC 269
Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE--------------------------- 277
G +F + + ++V+ N ++ G E
Sbjct: 270 GKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV 329
Query: 278 -----------VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWN 326
+HGY ++S +V L +Y+K I+ +R +F K SWN
Sbjct: 330 PVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN 389
Query: 327 TMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKL 386
MISG QNG E+AI F M++ + ++ LS+CA LG + LG+ +H
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST 449
Query: 387 GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
+S + VS AL+ +YA G ++ ++F LM + ++V+WN++I + EA+
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYG-LHGQGQEALNI 508
Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYG 505
+ +M +G +P VTF+ +L A S + K G ++ +I +Y ++ G
Sbjct: 509 FYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILG 568
Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMI 533
+ G + + MS W +++
Sbjct: 569 RAGHLQRALQFIEAMSIEPGSSVWETLL 596
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 250/712 (35%), Positives = 405/712 (56%), Gaps = 42/712 (5%)
Query: 260 KNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIG 319
K ++ ++ + + K++H IR+ + + ++++Y + ++ +F+ +
Sbjct: 9 KTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKS 67
Query: 320 KDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQI 379
++W ++I + +A+ +F MR G + S L SC + + G+ +
Sbjct: 68 PPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127
Query: 380 HGEGLKLGLDSDVSVSNALLSLYADA-GYLSR--------------------------CL 412
HG ++LG+D D+ NAL+++YA G S+ C+
Sbjct: 128 HGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCI 187
Query: 413 ---------KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFI 463
+VF +MP D VS+N++I +A S + +A++ +M P+ T
Sbjct: 188 MPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQS-GMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 464 NILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER 523
++L S + G ++H VI+ + ++ I ++L+ Y K ++D E++F+R+
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY-C 305
Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
RD +SWNS+++GY+ N +A+ L M+ + F++V+ ACA +ATL G ++
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 584 HACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHG 643
H +R ++ I SALVDMYSKCG I A + FD M V + SW ++I G+A HGHG
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG 425
Query: 644 DKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSC 703
+A++LF +MK G P+ V FV VL+ACSH GLVDE + +F SM++VYGL +LE ++
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485
Query: 704 MVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEP 763
+ DLLGRAG+L++ FI+KM + P +W T+L +C + + EL K A +F ++
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSC--SVHKNLELAEKVAEKIFTVDS 543
Query: 764 QNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHP 823
+N YVL+ NMYAS G+W+++AK R M++ ++K+ CSW+ MK+ H FV+GD SHP
Sbjct: 544 ENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHP 603
Query: 824 EKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSK 882
D I E LK + ++M GYV T L D++ E K +L+ HSE++AVAF ++
Sbjct: 604 SMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPG 663
Query: 883 LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
IR+ KN+R+C DCH A KFISKI REI++RD++RFHHFN G CSCGDYW
Sbjct: 664 TTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/547 (25%), Positives = 248/547 (45%), Gaps = 56/547 (10%)
Query: 4 AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
A+ Q L H A + +I++Y + L A LF + ++W ++ +T
Sbjct: 29 AQFIRTQSLSHTSA------SIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTD 82
Query: 64 KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
+ + ++A F EM +G + SVL++C +FG VH +++ D
Sbjct: 83 QSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMM--MDLRFGESVHGFIVRLGMDCDL 140
Query: 124 LVSNVLIAMYGSCLE--STDCARRIFEEIETRDLISWNSIISVYS--QRGDTISVFKLFS 179
N L+ MY L S +F+E+ R S + + + SV ++F
Sbjct: 141 YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFE 200
Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSG---SYLLQQILAMVKKAGLLSDLYVGSA 236
M R+ +Y+++++G S + + L MV++ G +DL S
Sbjct: 201 VMPRKD----------------VVSYNTIIAGYAQSGMYEDALRMVREMGT-TDLKPDSF 243
Query: 237 LVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG 296
+S IF + + +V+ KGKE+HGY+IR G+ V +G+
Sbjct: 244 TLSSVL---------PIFSEYV--DVI----------KGKEIHGYVIRKGIDSDVYIGSS 282
Query: 297 LVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSS 356
LV+MYAK I+DS VF + +D +SWN++++G QNG Y EA+ F M +
Sbjct: 283 LVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPG 342
Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFF 416
+ S + +CA L + LG+Q+HG L+ G S++ +++AL+ +Y+ G + K+F
Sbjct: 343 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFD 402
Query: 417 LMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGK 476
M D+VSW ++I A EAV + +M+R G PN V F+ +L A S +
Sbjct: 403 RMNVLDEVSWTAIIMGHA-LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 461
Query: 477 LGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
+ K Y + E A+ G+ G++++ ++M W++++S
Sbjct: 462 EAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSS 521
Query: 536 -YIHNEL 541
+H L
Sbjct: 522 CSVHKNL 528
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 205/448 (45%), Gaps = 47/448 (10%)
Query: 354 MSSNFSLISTL-SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL 412
MSS+ +LI TL + + +Q+H + ++ S S S ++S+Y + L L
Sbjct: 1 MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSAS-IVISIYTNLKLLHEAL 59
Query: 413 KVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSF 472
+F + ++W SVI F D ++L S+A+ +++MR +G P+ F ++L + +
Sbjct: 60 LLFKTLKSPPVLAWKSVIRCFTD-QSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMM 118
Query: 473 SMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEM---------------------- 510
+ G VH +++ + + NAL++ Y K M
Sbjct: 119 MDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGD 178
Query: 511 --------------DDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
D ++F M R+D VS+N++I+GY + + A+ +V M
Sbjct: 179 EDVKAETCIMPFGIDSVRRVFEVMP-RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD 237
Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
+ D FT ++VL + + +G E+H +R ++ DV IGS+LVDMY+K RI+ +
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297
Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAG 676
R F + R+ SWNS+++GY ++G ++AL LF QM P V F V+ AC+H
Sbjct: 298 RVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 357
Query: 677 LVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTV 736
+ G K G + S +VD+ + G + + ++M + +
Sbjct: 358 TLHLG-KQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAII 416
Query: 737 LGACCRANCRKTELGRKAANMLFEMEPQ 764
+G + G +A ++ EM+ Q
Sbjct: 417 MGHALHGH------GHEAVSLFEEMKRQ 438
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 271/730 (37%), Positives = 412/730 (56%), Gaps = 47/730 (6%)
Query: 216 QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKG 275
+ + A+ K+ + S Y+ + V+ +++ G YAR F + NV S N +
Sbjct: 28 KSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVI------- 80
Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
V YAK I +R +F + D+VS+NT+ISG
Sbjct: 81 ----------------------VKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADA 118
Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
A++ F MR+ G F+L +++C + L +Q+H + G DS SV+
Sbjct: 119 RETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDR--VDLIKQLHCFSVSGGFDSYSSVN 176
Query: 396 NALLSLYADAGYLSRCLKVFFLMPE-HDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAG 454
NA ++ Y+ G L + VF+ M E D+VSWNS+I A+ + ++A+ Y +M G
Sbjct: 177 NAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKE-GAKALALYKEMIFKG 235
Query: 455 WSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMD--- 511
+ + T ++L A +S G Q H ++IK + + + L+ Y KCG D
Sbjct: 236 FKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMY 295
Query: 512 DCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR-GQRLDHFTFATVLSA 570
D EK+F + D V WN+MISGY NE L + + MQR G R D +F V SA
Sbjct: 296 DSEKVFQEILSP-DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSA 354
Query: 571 CASVATLERGMEVHACGVRACLEFD-VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
C+++++ + ++H +++ + + + + +AL+ +Y K G + A FD MP N S
Sbjct: 355 CSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS 414
Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
+N MI GYA+HGHG +AL L+ +M G P+ +TFV VLSAC+H G VDEG ++F +M
Sbjct: 415 FNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMK 474
Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
+ + + P+ E +SCM+DLLGRAG+L++ E FI+ MP P S+ W +LGAC + +
Sbjct: 475 ETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH--KNMA 532
Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMK 809
L +AAN L M+P A YV+LANMYA KWE++A RK+M+ ++K+ GCSW+ +K
Sbjct: 533 LAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVK 592
Query: 810 DGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDL---VSY 866
HVFVA D SHP + E L+E+ +KM+ GYV K+A+ + + D + +
Sbjct: 593 KKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGH 652
Query: 867 HSEKIAVAFVL--TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFN 924
HSEK+AVAF L TR+ + + ++KNLR+CGDCH+A KF+S + GREI++RD+ RFH F
Sbjct: 653 HSEKLAVAFGLMSTRDGE-ELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFK 711
Query: 925 DGKCSCGDYW 934
DGKCSCGDYW
Sbjct: 712 DGKCSCGDYW 721
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 233/507 (45%), Gaps = 91/507 (17%)
Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSC---------LESTD---------------- 141
G +H L +KS +SN + +Y C ST+
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 142 -----CARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYT 196
AR++F+EI D +S+N++IS Y+ +T + LF RM++ GF + + +T
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGF----EVDGFT 142
Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
LI A V L++Q+ G S V +A V+ +++ G A +F
Sbjct: 143 LSGLIAACCDRV----DLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYG 198
Query: 257 MIQ-KNVVSMNGLM-------EGRRK---------------------------------- 274
M + ++ VS N ++ EG +
Sbjct: 199 MDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIG 258
Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTID---DSRSVFRFMIGKDSVSWNTMISG 331
G++ HG LI++G VG+GL++ Y+KCG D DS VF+ ++ D V WNTMISG
Sbjct: 259 GRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISG 318
Query: 332 LDQN-GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
N EEA+ +F M+R G + S + S+C++L +QIHG +K + S
Sbjct: 319 YSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPS 378
Query: 391 D-VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
+ +SV+NAL+SLY +G L VF MPE + VS+N +I +A +EA+ Y
Sbjct: 379 NRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQ-HGHGTEALLLYQR 437
Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGH-QVHAQVIK--YNVANETTIENALLSCYGK 506
M +G +PN +TF+ +L+A + GK+ Q + +K + + E + ++ G+
Sbjct: 438 MLDSGIAPNKITFVAVLSACA--HCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGR 495
Query: 507 CGEMDDCEKIFARMSERRDEVSWNSMI 533
G++++ E+ M + V+W +++
Sbjct: 496 AGKLEEAERFIDAMPYKPGSVAWAALL 522
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/503 (23%), Positives = 223/503 (44%), Gaps = 65/503 (12%)
Query: 19 DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
+VF N ++ Y + + A +LFDE+P ++VS+ ++SGY + A +FK M
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 79 RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
+ GF ++ + L ++ AC + Q+HC + V+N + Y
Sbjct: 133 KLGFEVDGFTLSGLIAACCD----RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
+ + E RD +SWNS+I Y Q + L+ M +GF+ + +T
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDM----FTLA 244
Query: 199 SLITAAYS--SVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN---FYYARKI 253
S++ A S ++ G +Q + KAG + +VGS L+ +++ G Y + K+
Sbjct: 245 SVLNALTSLDHLIGG----RQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKV 300
Query: 254 FEQMIQKNVVSMNGLMEG------------------RRKG-------------------- 275
F++++ ++V N ++ G +R G
Sbjct: 301 FQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSS 360
Query: 276 ----KEVHGYLIRSGL-FDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
K++HG I+S + + ++V N L+++Y K G + D+R VF M ++VS+N MI
Sbjct: 361 PSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIK 420
Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IHGEGLKLGLD 389
G Q+G EA++ + M G+ + + ++ LS+CA G + GQ+ + ++
Sbjct: 421 GYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIE 480
Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFADSE--ALVSEAVKY 446
+ + ++ L AG L + MP + V+W +++GA + AL A
Sbjct: 481 PEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANE 540
Query: 447 YLDMRRAGWSPNGVTFINILAAA 469
+ M+ +P V N+ A A
Sbjct: 541 LMVMQPLAATPY-VMLANMYADA 562
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 125/304 (41%), Gaps = 58/304 (19%)
Query: 478 GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSE--------------- 522
G +HA +K VA+ T + N ++ Y KCG + F E
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 523 ---------------RRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
+ D VS+N++ISGY AM L M + G +D FT + +
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 568 LSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYA-SRFFDLMPVRN 626
++AC L + ++H V + + +A V YSK G + A S F+ + +R+
Sbjct: 147 IAACCDRVDLIK--QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRD 204
Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-----------HA 675
SWNSMI Y +H G KAL L+ +M G D T VL+A + H
Sbjct: 205 EVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHG 264
Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI--EEFINKMPITPNSLIW 733
L+ GF + S ++D + G D + E + + ++P+ ++W
Sbjct: 265 KLIKAGFHQNSHVG------------SGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVW 312
Query: 734 RTVL 737
T++
Sbjct: 313 NTMI 316
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%)
Query: 9 LQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSN 68
L I H + + + N LI++Y + G+L A +FD MP+ N+VS+ C++ GY G
Sbjct: 370 LAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGT 429
Query: 69 EACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
EA +++ M+ +G N+ +VL AC CG
Sbjct: 430 EALLLYQRMLDSGIAPNKITFVAVLSACAHCG 461
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
TF +L + L G +HA V++ + + + V++YSKCGR+ YA F
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
NV+S+N ++ YA+ A LF ++ P PD V++ ++S + A
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEI----PQPDTVSYNTLISGYADARETFAAM 125
Query: 683 KHFKSMSQV 691
FK M ++
Sbjct: 126 VLFKRMRKL 134
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/662 (35%), Positives = 384/662 (58%), Gaps = 8/662 (1%)
Query: 276 KEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQN 335
K++H L+ GL + L++ + G I +R VF + WN +I G +N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 336 GCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVS 395
+++A++ + M+ + +F+ L +C+ L + +G+ +H + +LG D+DV V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 396 NALLSLYADAGYLSRCLKVF--FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
N L++LYA L VF +PE VSW +++ A+A + + EA++ + MR+
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM-EALEIFSQMRKM 216
Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
P+ V +++L A + K G +HA V+K + E + +L + Y KCG++
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
+ +F +M + + + WN+MISGY N +A+++ M+ + R D + + +SACA
Sbjct: 277 KILFDKM-KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
V +LE+ ++ R+ DV I SAL+DM++KCG ++ A FD R+V W++M
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYG 693
I GY HG +A++L+ M+ G P+ VTF+G+L AC+H+G+V EG+ F M+ +
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HK 454
Query: 694 LIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRK 753
+ PQ + ++C++DLLGRAG LD+ E I MP+ P +W +L AC + R ELG
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH--RHVELGEY 512
Query: 754 AANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVH 813
AA LF ++P N +YV L+N+YA+ W+ VA+ R MKE + K+ GCSWV ++ +
Sbjct: 513 AAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLE 572
Query: 814 VFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAV 873
F GD+SHP + I +++ + ++++ G+V +L DL E E+ + HSE+IA+
Sbjct: 573 AFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAI 632
Query: 874 AFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
A+ L + P+RI KNLR C +CH+A K ISK+V REIV+RD+NRFHHF DG CSCGD
Sbjct: 633 AYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGD 692
Query: 933 YW 934
YW
Sbjct: 693 YW 694
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 213/470 (45%), Gaps = 49/470 (10%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
K H ++L G + FL LI+ GD+ A ++FD++P W I+ GY+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 65 GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
+A M+ M A + + +L+AC G S + G VH V + D
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACS--GLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 125 VSNVLIAMYGSCLESTDCARRIFE--EIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
V N LIA+Y C AR +FE + R ++SW +I+S Y+Q G+ + ++FS+M+
Sbjct: 156 VQNGLIALYAKC-RRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 183 REGFRYSLKPNEYTFGSLITA------------AYSSVLSGSY-----LLQQILAMVKKA 225
+ +KP+ S++ A ++SV+ LL + M K
Sbjct: 215 K----MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC 270
Query: 226 GLLS------------DLYVGSALVSGFARLGNFYYARKIFEQMIQKNV----------V 263
G ++ +L + +A++SG+A+ G A +F +MI K+V +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 264 SMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
S + + + ++ Y+ RS D V + + L++M+AKCG+++ +R VF + +D V
Sbjct: 331 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390
Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
W+ MI G +G EAI + AM R G+ ++ + + L +C G + G
Sbjct: 391 VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM 450
Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVIGA 432
++ ++ L AG+L + +V MP V+ W +++ A
Sbjct: 451 ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 19/309 (6%)
Query: 2 KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
K + H ++K G + L +L +Y + G +A+A LFD+M N + W ++SGY
Sbjct: 239 KQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGY 298
Query: 62 THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
G + EA MF EM+ + ++ S + AC + G + ++ V +S+
Sbjct: 299 AKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG--SLEQARSMYEYVGRSDYRD 356
Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
D +S+ LI M+ C S + AR +F+ RD++ W+++I Y G L+ M
Sbjct: 357 DVFISSALIDMFAKC-GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415
Query: 182 QREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
+R G + PN+ TF L+ A S V G + ++ K Y + ++
Sbjct: 416 ERGG----VHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD--HKINPQQQHY--ACVID 467
Query: 240 GFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG- 296
R G+ A ++ + M +Q V L+ +K + V G LF + G
Sbjct: 468 LLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGH 527
Query: 297 ---LVNMYA 302
L N+YA
Sbjct: 528 YVQLSNLYA 536
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 258/777 (33%), Positives = 429/777 (55%), Gaps = 57/777 (7%)
Query: 110 VHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRG 169
VH ++ D +SN+LI +Y AR++FE++ R+L+SW++++S + G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRA-GGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124
Query: 170 ---DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
+++ VF F R +++ PNEY S I A G +++ Q+ + + K+G
Sbjct: 125 IYEESLVVFLEFWRTRKDS------PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSG 178
Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------ 274
D+YVG+ L+ + + GN YAR +F+ + +K+ V+ ++ G K
Sbjct: 179 FDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFY 238
Query: 275 -----------------------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCG 305
GK++H +++R GL ++ N L++ Y KCG
Sbjct: 239 QLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCG 298
Query: 306 TIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLS 365
+ + +F M K+ +SW T++SG QN ++EA+ F +M + GL ++ S L+
Sbjct: 299 RVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILT 358
Query: 366 SCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS 425
SCASL + G Q+H +K L +D V+N+L+ +YA L+ KVF + D V
Sbjct: 359 SCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVL 418
Query: 426 WNSVIGAFA--DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHA 483
+N++I ++ ++ + EA+ + DMR P+ +TF+++L A++S + L Q+H
Sbjct: 419 FNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHG 478
Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLP 543
+ KY + + +AL+ Y C + D +F M + +D V WNSM +GY+
Sbjct: 479 LMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM-KVKDLVIWNSMFAGYVQQSENE 537
Query: 544 KAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALV 603
+A+NL + +R D FTFA +++A ++A+++ G E H ++ LE + I +AL+
Sbjct: 538 EALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALL 597
Query: 604 DMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHV 663
DMY+KCG + A + FD R+V WNS+IS YA HG G KAL + +M +G P+++
Sbjct: 598 DMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYI 657
Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
TFVGVLSACSHAGLV++G K F+ M + +G+ P+ E + CMV LLGRAG L+K E I K
Sbjct: 658 TFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEK 716
Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
MP P +++WR++L C +A EL AA M +P+++ ++ +L+N+YAS G W
Sbjct: 717 MPTKPAAIVWRSLLSGCAKAG--NVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWT 774
Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR 840
+ K R+ MK V KE G SW+ + VH+F++ D+SH + + IYE L +L ++R
Sbjct: 775 EAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 279 bits (714), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 199/685 (29%), Positives = 328/685 (47%), Gaps = 55/685 (8%)
Query: 8 HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
H QI+ G D +L N LIN+Y R G + A K+F++MP+RN VSW+ +VS H G+
Sbjct: 67 HGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIY 126
Query: 68 NEACKMFKEMVRA-GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
E+ +F E R N Y L S ++AC G Q+ ++KS D V
Sbjct: 127 EESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVG 186
Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGF 186
+LI Y + D AR +F+ + + ++W ++IS + G + +LF ++ +
Sbjct: 187 TLLIDFYLKD-GNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED-- 243
Query: 187 RYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGN 246
++ P+ Y ++++A S+L +QI A + + GL D + + L+ + + G
Sbjct: 244 --NVVPDGYILSTVLSAC--SILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 247 FYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------------- 274
A K+F M KN++S L+ G ++
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 275 ---------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSW 325
G +VH Y I++ L + V N L++MYAKC + D+R VF D V +
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLF 419
Query: 326 NTMISGLDQNGC---YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
N MI G + G EA+ F MR + S + +S L + ASL + L +QIHG
Sbjct: 420 NAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
K GL+ D+ +AL+ +Y++ L VF M D V WNS+ + ++ E
Sbjct: 480 MFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQ-QSENEE 538
Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
A+ +L+++ + P+ TF N++ AA + + +LG + H Q++K + I NALL
Sbjct: 539 ALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLD 598
Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
Y KCG +D K F + RD V WNS+IS Y ++ KA+ ++ MM G ++
Sbjct: 599 MYAKCGSPEDAHKAFDSAAS-RDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYI 657
Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
TF VLSAC+ +E G++ +R +E + +V + + GR++ A + M
Sbjct: 658 TFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKM 717
Query: 623 PVRN-VYSWNSMISGYARHGHGDKA 646
P + W S++SG A+ G+ + A
Sbjct: 718 PTKPAAIVWRSLLSGCAKAGNVELA 742
Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 229/474 (48%), Gaps = 48/474 (10%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
K H IL++G D L N LI+ YV+ G + +A KLF+ MP++N +SW ++SGY
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 65 GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
+ EA ++F M + G + YA S+L +C G FG QVH +K+N D
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALG--FGTQVHAYTIKANLGNDSY 386
Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
V+N LI MY C TD AR++F+ D++ +N++I YS+ G + + + +
Sbjct: 387 VTNSLIDMYAKCDCLTD-ARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDM 445
Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
FR ++P+ TF SL+ A S+ L+ L +QI ++ K GL D++ GSAL+ ++
Sbjct: 446 RFRL-IRPSLLTFVSLLRA--SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNC 502
Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRK------------------------------ 274
+R +F++M K++V N + G +
Sbjct: 503 YCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMV 562
Query: 275 -----------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSV 323
G+E H L++ GL + N L++MYAKCG+ +D+ F +D V
Sbjct: 563 TAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVV 622
Query: 324 SWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEG 383
WN++IS +G ++A+ M +G+ + + + LS+C+ G + G +
Sbjct: 623 CWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM 682
Query: 384 LKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHD-QVSWNSVIGAFADS 436
L+ G++ + ++SL AG L++ ++ MP + W S++ A +
Sbjct: 683 LRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKA 736
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 140/279 (50%), Gaps = 6/279 (2%)
Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
F +L +S + + VH Q+I + + +T + N L++ Y + G M K+F +M
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 522 ERRDEVSWNSMISGYIHNELLPKAMNL-VWFMMQRGQRLDHFTFATVLSACASVATLERG 580
E R+ VSW++M+S H+ + +++ + + F R + + ++ + AC+ + R
Sbjct: 107 E-RNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRW 165
Query: 581 M--EVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
M ++ + V++ + DV +G+ L+D Y K G IDYA FD +P ++ +W +MISG
Sbjct: 166 MVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCV 225
Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
+ G +L LF Q+ D +PD VLSACS + EG K + YGL
Sbjct: 226 KMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFL-EGGKQIHAHILRYGLEMDA 284
Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVL 737
+ ++D + G + + N MP N + W T+L
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTLL 322
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 9/257 (3%)
Query: 4 AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
+K H + K+G D+F + LI+VY L + +FDEM ++ V W + +GY
Sbjct: 473 SKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQ 532
Query: 64 KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
+ + EA +F E+ + + + +++ A + + G + HC +LK +
Sbjct: 533 QSENEEALNLFLELQLSRERPDEFTFANMVTAAGNL--ASVQLGQEFHCQLLKRGLECNP 590
Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
++N L+ MY C D A + F+ +RD++ WNS+IS Y+ G+ ++ +M
Sbjct: 591 YITNALLDMYAKCGSPED-AHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMS 649
Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
EG ++PN TF +++A + L L Q ++ + G+ + +VS R
Sbjct: 650 EG----IEPNYITFVGVLSACSHAGLVEDGLKQ--FELMLRFGIEPETEHYVCMVSLLGR 703
Query: 244 LGNFYYARKIFEQMIQK 260
G AR++ E+M K
Sbjct: 704 AGRLNKARELIEKMPTK 720
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 555 RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDY 614
RG+R FA +L AS L VH + LE D + + L+++YS+ G + Y
Sbjct: 42 RGRR----EFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVY 97
Query: 615 ASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQM-KLDGPLPDHVTFVGVLSACS 673
A + F+ MP RN+ SW++M+S HG +++L +F + + P+ + ACS
Sbjct: 98 ARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS 157
Query: 674 HAGLVDEG---FKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNS 730
GL G +S G + + ++D + G +D + +P ++
Sbjct: 158 --GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKST 214
Query: 731 LIWRTVLGACCR 742
+ W T++ C +
Sbjct: 215 VTWTTMISGCVK 226
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/731 (33%), Positives = 383/731 (52%), Gaps = 73/731 (9%)
Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
K + H +++SG + + L+ Y+ +D+ V + + S++++I L
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
+ + ++I F M GL+ + L + CA L +G+QIH GLD D
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQV----------------------------- 424
V ++ +Y G + KVF M + D V
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 425 ------SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
SWN ++ F S EAV + + G+ P+ VT ++L + M +G
Sbjct: 213 IEANIVSWNGILSGFNRS-GYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEM---------------------------- 510
+H VIK + + + +A++ YGK G +
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 511 ---DDCEKIFARMSERRDE---VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
D ++F E+ E VSW S+I+G N +A+ L M G + +H T
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
++L AC ++A L G H VR L +V +GSAL+DMY+KCGRI+ + F++MP
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
+N+ WNS+++G++ HG + +++F + PD ++F +LSAC GL DEG+K+
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
FK MS+ YG+ P+LE +SCMV+LLGRAG+L + + I +MP P+S +W +L +C N
Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQN 571
Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
+L AA LF +EP+N YVLL+N+YA+ G W +V R M+ +KK GCS
Sbjct: 572 --NVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629
Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLV 864
W+ +K+ V+ +AGD+SHP+ D I EK+ E++++MR +G+ P FAL D+E + +E ++
Sbjct: 630 WIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQML 689
Query: 865 SYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
HSEK+AV F +L P++++KNLR+CGDCH+ KFIS GREI +RD+NRFHHF
Sbjct: 690 WGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHF 749
Query: 924 NDGKCSCGDYW 934
DG CSCGD+W
Sbjct: 750 KDGICSCGDFW 760
Score = 152 bits (385), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 116/545 (21%), Positives = 248/545 (45%), Gaps = 35/545 (6%)
Query: 8 HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
H +ILK G D ++ LI Y A + +PD S++ ++ T +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 68 NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
++ +F M G + + + L ++ + C E S FK G Q+HC+ S D V
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAEL--SAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
+ MY C D AR++F+ + +D+++ ++++ Y+++G V ++ S M+ G
Sbjct: 156 SMFHMYMRCGRMGD-ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 188 YSLKPNEYTFGSLITAAYSSVLSG---SYLLQQILAMVKKA---GLLSDLYVGSALV--- 238
++ +++ +LSG S ++ + M +K G D S+++
Sbjct: 215 ANI------------VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSV 262
Query: 239 --SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVG-- 294
S +G + + +Q + K+ ++ +++ K V+G + F+M+ G
Sbjct: 263 GDSEMLNMGRLIHGY-VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVC 321
Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGK----DSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
N + ++ G +D + +F + + VSW ++I+G QNG EA+ F M+
Sbjct: 322 NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV 381
Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSR 410
G+ ++ ++ S L +C ++ + G+ HG +++ L +V V +AL+ +YA G ++
Sbjct: 382 AGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINL 441
Query: 411 CLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAAS 470
VF +MP + V WNS++ F+ E + + + R P+ ++F ++L+A
Sbjct: 442 SQIVFNMMPTKNLVCWNSLMNGFS-MHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACG 500
Query: 471 SFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
+ G + + +Y + + +++ G+ G++ + + M D W
Sbjct: 501 QVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVW 560
Query: 530 NSMIS 534
++++
Sbjct: 561 GALLN 565
Score = 147 bits (371), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 132/561 (23%), Positives = 246/561 (43%), Gaps = 90/561 (16%)
Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYG--SCLESTDCARRIFEEIETRDLISWNSIISVYS 166
Q H +LKS DG +S LIA Y +C D + + I + S++S+I +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADL---VLQSIPDPTIYSFSSLIYALT 92
Query: 167 QRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAG 226
+ +FSRM F + L P+ + +L + LS + +QI + +G
Sbjct: 93 KAKLFTQSIGVFSRM----FSHGLIPDSHVLPNLFKVC--AELSAFKVGKQIHCVSCVSG 146
Query: 227 LLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSG 286
L D +V ++ + R G ARK+F++M K+VV+ + L+
Sbjct: 147 LDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA--------------- 191
Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM----IGKDSVSWNTMISGLDQNGCYEEAI 342
YA+ G +++ + M I + VSWN ++SG +++G ++EA+
Sbjct: 192 --------------YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAV 237
Query: 343 MNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLY 402
+ F + G ++ S L S + +G+ IHG +K GL D V +A++ +Y
Sbjct: 238 VMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMY 297
Query: 403 ADAGY-------------------------------LSRCLKVFFLMPEH----DQVSWN 427
+G+ + + L++F L E + VSW
Sbjct: 298 GKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWT 357
Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
S+I A + + EA++ + +M+ AG PN VT ++L A + + G H ++
Sbjct: 358 SIIAGCAQNGKDI-EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVR 416
Query: 488 YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMN 547
++ + + +AL+ Y KCG ++ + +F M ++ V WNS+++G+ + + M+
Sbjct: 417 VHLLDNVHVGSALIDMYAKCGRINLSQIVF-NMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 548 LVWFMMQRGQRLDHFTFATVLSACASVATLERG-----MEVHACGVRACLEFDVVIGSAL 602
+ +M+ + D +F ++LSAC V + G M G++ LE S +
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY----SCM 531
Query: 603 VDMYSKCGRIDYASRFFDLMP 623
V++ + G++ A MP
Sbjct: 532 VNLLGRAGKLQEAYDLIKEMP 552
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 167/420 (39%), Gaps = 88/420 (20%)
Query: 2 KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDR------------ 49
K K H G D F+ ++ ++Y+R G + A K+FD M D+
Sbjct: 133 KVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAY 192
Query: 50 -----------------------NSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNR 86
N VSW I+SG+ G EA MF+++ GF ++
Sbjct: 193 ARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQ 252
Query: 87 YALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC---------- 136
+ SVL + + G +H V+K D V + +I MYG
Sbjct: 253 VTVSSVLPSVGD--SEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310
Query: 137 -----LESTDC---------------ARRIFEEIETR----DLISWNSIISVYSQRGDTI 172
+E+ C A +FE + + +++SW SII+ +Q G I
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 173 SVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLY 232
+LF MQ G +KPN T S++ A + G A+ + LL +++
Sbjct: 371 EALELFREMQVAG----VKPNHVTIPSMLPACGNIAALGHGRSTHGFAV--RVHLLDNVH 424
Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---RRKGKEVHGY---LIRSG 286
VGSAL+ +A+ G ++ +F M KN+V N LM G K KEV L+R+
Sbjct: 425 VGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR 484
Query: 287 LFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA 341
L L++ + G D+ F+ M I ++ M++ L + G +EA
Sbjct: 485 LKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEA 544
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust.
Identities = 256/693 (36%), Positives = 386/693 (55%), Gaps = 62/693 (8%)
Query: 250 ARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN-----GLVNMYAKC 304
ARK+F++M +N++S NGL+ G K E+ +FD++ N LV Y
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEA---RKVFDLMPERNVVSWTALVKGYVHN 123
Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
G +D + S+F M K+ VSW M+ G Q+G ++A C + N + S +
Sbjct: 124 GKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDA----CKLYEMIPDKDNIARTSMI 179
Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
G + ++I E + V +++ Y + K+F +MPE +V
Sbjct: 180 HGLCKEGRVDEAREIFDEMS----ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV 235
Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQ 484
SW S++ G+ NG I A F + + +
Sbjct: 236 SWTSML----------------------MGYVQNG----RIEDAEELFEVMPVKPVIAC- 268
Query: 485 VIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPK 544
NA++S G+ GE+ ++F M ER D SW ++I + N +
Sbjct: 269 -------------NAMISGLGQKGEIAKARRVFDSMKERND-ASWQTVIKIHERNGFELE 314
Query: 545 AMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVD 604
A++L M ++G R T ++LS CAS+A+L G +VHA VR + DV + S L+
Sbjct: 315 ALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMT 374
Query: 605 MYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHV 663
MY KCG + + FD P +++ WNS+ISGYA HG G++AL +F +M L G P+ V
Sbjct: 375 MYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 434
Query: 664 TFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINK 723
TFV LSACS+AG+V+EG K ++SM V+G+ P ++CMVD+LGRAG ++ E I+
Sbjct: 435 TFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDS 494
Query: 724 MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWE 783
M + P++ +W ++LGA CR + + ++ A L E+EP+N+ Y+LL+NMYAS G+W
Sbjct: 495 MTVEPDAAVWGSLLGA-CRTHS-QLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWA 552
Query: 784 DVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD-ESHPEKDLIYEKLKELNQKMRDA 842
DVA+ RK MK V+K GCSW +++ VH F G SHPE++ I + L EL+ +R+A
Sbjct: 553 DVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREA 612
Query: 843 GYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAF 901
GY P +AL D++ E K + + YHSE++AVA+ L + S+ +PIR+MKNLRVC DCH+A
Sbjct: 613 GYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAI 672
Query: 902 KFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
K ISK+ REI+LRD+NRFHHF +G+CSC DYW
Sbjct: 673 KIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/519 (25%), Positives = 233/519 (44%), Gaps = 49/519 (9%)
Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
AR++F+ +++ + SWNS+++ Y KLF M P+
Sbjct: 36 ARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM----------PDRNII----- 80
Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS--ALVSGFARLGNFYYARKIFEQMIQK 260
+++ ++SG +I K L+ + V S ALV G+ G A +F +M +K
Sbjct: 81 -SWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK 139
Query: 261 NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA-----VGNGLVNMYAKCGTIDDSRSVFR 315
N VS ++ G + + L++M+ +++ K G +D++R +F
Sbjct: 140 NKVSWTVMLIGFLQDGRIDDA---CKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFD 196
Query: 316 FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIML 375
M + ++W TM++G QN ++A F M + S S L +G++
Sbjct: 197 EMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPE----KTEVSWTSML-----MGYVQN 247
Query: 376 GQQIHGEGL-KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
G+ E L ++ V NA++S G +++ +VF M E + SW +VI
Sbjct: 248 GRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVI-KIH 306
Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANET 494
+ EA+ ++ M++ G P T I+IL+ +S + G QVHAQ+++ +
Sbjct: 307 ERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDV 366
Query: 495 TIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQ 554
+ + L++ Y KCGE+ + IF R +D + WNS+ISGY + L +A+ + M
Sbjct: 367 YVASVLMTMYIKCGELVKSKLIFDRFPS-KDIIMWNSIISGYASHGLGEEALKVFCEMPL 425
Query: 555 RGQ-RLDHFTFATVLSACASVATLERGMEVHAC-----GVRACLEFDVVIGSALVDMYSK 608
G + + TF LSAC+ +E G++++ GV+ + +VDM +
Sbjct: 426 SGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAH----YACMVDMLGR 481
Query: 609 CGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKA 646
GR + A D M V + W S++ H D A
Sbjct: 482 AGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVA 520
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 219/470 (46%), Gaps = 59/470 (12%)
Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-QREG 185
N ++A Y + L D AR++F+E+ R++ISWN ++S Y + G+ K+F M +R
Sbjct: 52 NSMVAGYFANLMPRD-ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNV 110
Query: 186 FRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSD--------LY----- 232
++ Y + A S+ ++ V G L D LY
Sbjct: 111 VSWTALVKGYVHNGKVDVA-ESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPD 169
Query: 233 ----VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVH--------- 279
++++ G + G AR+IF++M +++V++ ++ G + V
Sbjct: 170 KDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM 229
Query: 280 -------------GYLIRSG-------LFDMVAVG-----NGLVNMYAKCGTIDDSRSVF 314
GY +++G LF+++ V N +++ + G I +R VF
Sbjct: 230 PEKTEVSWTSMLMGY-VQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVF 288
Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
M ++ SW T+I ++NG EA+ F M++ G+ + +LIS LS CASL +
Sbjct: 289 DSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLH 348
Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
G+Q+H + ++ D DV V++ L+++Y G L + +F P D + WNS+I +A
Sbjct: 349 HGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYA 408
Query: 435 DSEALVSEAVKYYLDMRRAGWS-PNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVAN 492
S L EA+K + +M +G + PN VTF+ L+A S M + G +++ + + V
Sbjct: 409 -SHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKP 467
Query: 493 ETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
T ++ G+ G ++ ++ M+ D W S++ H++L
Sbjct: 468 ITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQL 517
Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 200/456 (43%), Gaps = 75/456 (16%)
Query: 24 NTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL 83
N L++ Y++ G++ A K+FD MP+RN VSW +V GY H G + A +F +M
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK--- 139
Query: 84 LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES-TDC 142
N+ + +L + G + C + + D + +I +G C E D
Sbjct: 140 -NKVSWTVMLIGFLQDG------RIDDACKLYEMIPDKDNIARTSMI--HGLCKEGRVDE 190
Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
AR IF+E+ R +I+W ++++ Y Q K+F M + E ++ S++
Sbjct: 191 AREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK--------TEVSWTSMLM 242
Query: 203 A-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
+ + + L +++ + + +A++SG + G AR++F+ M ++N
Sbjct: 243 GYVQNGRIEDAEELFEVMP-------VKPVIACNAMISGLGQKGEIAKARRVFDSMKERN 295
Query: 262 VVSMNGLM---------------------EGRRK--------------------GKEVHG 280
S ++ +G R GK+VH
Sbjct: 296 DASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHA 355
Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
L+R V V + L+ MY KCG + S+ +F KD + WN++ISG +G EE
Sbjct: 356 QLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEE 415
Query: 341 AIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLK--LGLDSDVSVSNA 397
A+ FC M G N + ++TLS+C+ G + G +I+ E ++ G+ +
Sbjct: 416 ALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY-ESMESVFGVKPITAHYAC 474
Query: 398 LLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
++ + AG + +++ M E D W S++GA
Sbjct: 475 MVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA 510
Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 138/305 (45%), Gaps = 15/305 (4%)
Query: 20 VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
V CN +I+ + G++A A ++FD M +RN SW ++ + G EA +F M +
Sbjct: 265 VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK 324
Query: 80 AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
G L S+L C + G QVH +++ D V++VL+ MY C E
Sbjct: 325 QGVRPTFPTLISILSVCASL--ASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGEL 382
Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
++ IF+ ++D+I WNSIIS Y+ G K+F M G S KPNE TF +
Sbjct: 383 VK-SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSG---STKPNEVTFVA 438
Query: 200 LITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
++A +Y+ ++ + + + V ++ Y + +V R G F A ++ + M
Sbjct: 439 TLSACSYAGMVEEGLKIYESMESVFGVKPITAHY--ACMVDMLGRAGRFNEAMEMIDSMT 496
Query: 259 QKNVVSMNGLMEG--RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDSRS 312
+ ++ G + G R + L ++ +G L NMYA G D
Sbjct: 497 VEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAE 556
Query: 313 VFRFM 317
+ + M
Sbjct: 557 LRKLM 561
Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 108/252 (42%), Gaps = 48/252 (19%)
Query: 20 VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
V T++ Y + + A K+FD MP++ VSW ++ GY G +A ++F+ M
Sbjct: 203 VITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM-- 260
Query: 80 AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
P V+ N GL IA
Sbjct: 261 ------------------PVKP------------VIACNAMISGLGQKGEIAK------- 283
Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
ARR+F+ ++ R+ SW ++I ++ + G + LF MQ++G R P T S
Sbjct: 284 ---ARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR----PTFPTLIS 336
Query: 200 LITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQ 259
+++ S L+ + +Q+ A + + D+YV S L++ + + G ++ IF++
Sbjct: 337 ILSVCAS--LASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS 394
Query: 260 KNVVSMNGLMEG 271
K+++ N ++ G
Sbjct: 395 KDIIMWNSIISG 406
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
K H Q+++ F DV++ + L+ +Y++ G+L + +FD P ++ + W I+SGY
Sbjct: 351 KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASH 410
Query: 65 GMSNEACKMFKEMVRAGFL-LNRYALGSVLRACQECG 100
G+ EA K+F EM +G N + L AC G
Sbjct: 411 GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG 447
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 446 bits (1147), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/630 (38%), Positives = 370/630 (58%), Gaps = 14/630 (2%)
Query: 315 RFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIM 374
R++ D SWN++I+ L ++G EA++ F +MR+ L + S + +C+SL I
Sbjct: 34 RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93
Query: 375 LGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFA 434
G+Q H + G SD+ VS+AL+ +Y+ G L KVF +P+ + VSW S+I +
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGY- 152
Query: 435 DSEALVSEAVKYYLDMRRAGWSPNGVTF------INILAAASSFSMGKLGHQVHAQVIKY 488
D +AV + D+ + F +++++A S L +H+ VIK
Sbjct: 153 DLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKR 212
Query: 489 NVANETTIENALLSCYGKCGE--MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAM 546
++ N LL Y K GE + KIF ++ ++ D VS+NS++S Y + + +A
Sbjct: 213 GFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK-DRVSYNSIMSVYAQSGMSNEAF 271
Query: 547 NLVWFMMQ-RGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
+ +++ + + T +TVL A + L G +H +R LE DV++G++++DM
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF 665
Y KCGR++ A + FD M +NV SW +MI+GY HGH KAL LF M G P+++TF
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITF 391
Query: 666 VGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP 725
V VL+ACSHAGL EG++ F +M +G+ P LE + CMVDLLGRAG L K + I +M
Sbjct: 392 VSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK 451
Query: 726 ITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDV 785
+ P+S+IW ++L A CR + + EL + LFE++ N Y+LL+++YA G+W+DV
Sbjct: 452 MKPDSIIWSSLLAA-CRIH-KNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDV 509
Query: 786 AKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
+ R MK + K G S + + VHVF+ GDE HP+++ IYE L ELN+K+ +AGYV
Sbjct: 510 ERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYV 569
Query: 846 PQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFI 904
T D++ E KE + HSEK+A+AF ++ + ++KNLRVC DCH+ K I
Sbjct: 570 SNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLI 629
Query: 905 SKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
SKIV RE V+RD+ RFHHF DG CSCGDYW
Sbjct: 630 SKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 146 bits (369), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 194/407 (47%), Gaps = 44/407 (10%)
Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
GK+ H G + V + L+ MY+ CG ++D+R VF + ++ VSW +MI G D
Sbjct: 95 GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 335 NGCYEEAIMNFCAM------RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
NG +A+ F + D + + L+S +S+C+ + L + IH +K G
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214
Query: 389 DSDVSVSNALLSLYADAGY--LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
D VSV N LL YA G ++ K+F + + D+VS+NS++ +A S + +EA +
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS-GMSNEAFEV 273
Query: 447 YLDM-RRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYG 505
+ + + + N +T +L A S ++G +H QVI+ + ++ + +++ Y
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333
Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFA 565
KCG ++ K F RM + ++ SW +MI+GY + KA+ L M+ G R ++ TF
Sbjct: 334 KCGRVETARKAFDRM-KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFV 392
Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
+VL+AC+ +H G R F+ + G F + P
Sbjct: 393 SVLAACSHAG-------LHVEGWRW---FNAMKGR------------------FGVEP-- 422
Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
+ + M+ R G KA L +MK+ PD + + +L+AC
Sbjct: 423 GLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK---PDSIIWSSLLAAC 466
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 193/444 (43%), Gaps = 58/444 (13%)
Query: 40 SKLFDEMPDRNSV-SWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQE 98
+ LF+ D+ V SW +++ G S EA F M + R + ++AC
Sbjct: 29 TTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACS- 87
Query: 99 CGPSGFKF--GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLI 156
S F G Q H D VS+ LI MY +C + D AR++F+EI R+++
Sbjct: 88 ---SLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLED-ARKVFDEIPKRNIV 143
Query: 157 SWNSIISVYSQRGDTISVFKLFSRM--QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYL 214
SW S+I Y G+ + LF + ++ + S+I+A S + L
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISAC--SRVPAKGL 201
Query: 215 LQQILAMVKKAGLLSDLYVGSALVSGFAR--LGNFYYARKIFEQMIQKNVVSMNGLME-- 270
+ I + V K G + VG+ L+ +A+ G ARKIF+Q++ K+ VS N +M
Sbjct: 202 TESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVY 261
Query: 271 ----------------------------------------GRRKGKEVHGYLIRSGLFDM 290
R GK +H +IR GL D
Sbjct: 262 AQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDD 321
Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
V VG +++MY KCG ++ +R F M K+ SW MI+G +G +A+ F AM
Sbjct: 322 VIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID 381
Query: 351 DGLMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLS 409
G+ + + +S L++C+ G + G + + + G++ + ++ L AG+L
Sbjct: 382 SGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ 441
Query: 410 RCLKVFFLMP-EHDQVSWNSVIGA 432
+ + M + D + W+S++ A
Sbjct: 442 KAYDLIQRMKMKPDSIIWSSLLAA 465
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 141/278 (50%), Gaps = 22/278 (7%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
K H Q G+ D+F+ + LI +Y G L A K+FDE+P RN VSW ++ GY
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 65 GMSNEACKMFKEMV------RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSN 118
G + +A +FK+++ L+ L SV+ AC G +H V+K
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT--ESIHSFVIK-- 211
Query: 119 QTFDGLVS--NVLIAMYGSCLE-STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVF 175
+ FD VS N L+ Y E AR+IF++I +D +S+NSI+SVY+Q G + F
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271
Query: 176 KLFSRMQREGFRYSLKPNEYTFGS-LITAAYSSVLS-GSYLLQQILAMVKKAGLLSDLYV 233
++F R+ + + N T + L+ ++S L G + Q++ M GL D+ V
Sbjct: 272 EVFRRLVKNKV---VTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM----GLEDDVIV 324
Query: 234 GSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
G++++ + + G ARK F++M KNV S ++ G
Sbjct: 325 GTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAG 362
Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 157/382 (41%), Gaps = 61/382 (15%)
Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
E + +F R ++ D SWNS+I+ + +A+ M + +F +
Sbjct: 24 ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAI 83
Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
AC+S+ + G + H + D+ + SAL+ MYS CG+++ A + FD +P RN+
Sbjct: 84 KACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143
Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTF------VGVLSACS--------- 673
SW SMI GY +G+ A++LF + +D D F V V+SACS
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
Query: 674 --HAGLVDEGFKHFKSMSQVY----------GLIPQLEQFSCMVD-----------LLGR 710
H+ ++ GF S+ G+ + F +VD + +
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 711 AGELDKIEEFINKM----PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNA 766
+G ++ E ++ +T N++ TVL A + + +G+ + + M ++
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALR--IGKCIHDQVIRMGLEDD 321
Query: 767 VNY-VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK 825
V + +MY G+ E KA MK V+ SW M G G H K
Sbjct: 322 VIVGTSIIDMYCKCGRVETARKAFDRMKNKNVR-----SWTAMIAGY-----GMHGHAAK 371
Query: 826 DLIYEKLKELNQKMRDAGYVPQ 847
L EL M D+G P
Sbjct: 372 AL------ELFPAMIDSGVRPN 387
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
K H Q+++ G DV + ++I++Y + G + +A K FD M ++N SW +++GY
Sbjct: 307 KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMH 366
Query: 65 GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
G + +A ++F M+ +G N SVL AC G
Sbjct: 367 GHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAG 402
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 275/885 (31%), Positives = 443/885 (50%), Gaps = 91/885 (10%)
Query: 4 AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
+ H ++K G + + L+++Y + ++ A ++F+ + D N+V W C+ SGY
Sbjct: 179 GRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVK 238
Query: 64 KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
G+ EA +F+ M G + A +V+ G LK
Sbjct: 239 AGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK-------------LKD------ 279
Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
AR +F E+ + D+++WN +IS + +RG + F M++
Sbjct: 280 -------------------ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRK 320
Query: 184 EGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFAR 243
S+K T GS+++A +++ L + A K GL S++YVGS+LVS +++
Sbjct: 321 S----SVKSTRSTLGSVLSAI--GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374
Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEGR------------------------------- 272
A K+FE + +KN V N ++ G
Sbjct: 375 CEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSL 434
Query: 273 ----------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
G + H +I+ L + VGN LV+MYAKCG ++D+R +F M +D+
Sbjct: 435 LSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDN 494
Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
V+WNT+I Q+ EA F M G++S L STL +C + + G+Q+H
Sbjct: 495 VTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCL 554
Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
+K GLD D+ ++L+ +Y+ G + KVF +PE VS N++I ++ + + E
Sbjct: 555 SVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN--LEE 612
Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT-IENALL 501
AV + +M G +P+ +TF I+ A LG Q H Q+ K ++E + +LL
Sbjct: 613 AVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLL 672
Query: 502 SCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDH 561
Y M + +F+ +S + V W M+SG+ N +A+ M G D
Sbjct: 673 GMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQ 732
Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDL 621
TF TVL C+ +++L G +H+ + D + + L+DMY+KCG + +S+ FD
Sbjct: 733 ATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDE 792
Query: 622 MPVR-NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDE 680
M R NV SWNS+I+GYA++G+ + AL +F M+ +PD +TF+GVL+ACSHAG V +
Sbjct: 793 MRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSD 852
Query: 681 GFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC 740
G K F+ M YG+ +++ +CMVDLLGR G L + ++FI + P++ +W ++LGA
Sbjct: 853 GRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGA- 911
Query: 741 CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKE 800
CR + G +A L E+EPQN+ YVLL+N+YAS G WE RK M++ VKK
Sbjct: 912 CRIHGDDIR-GEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKV 970
Query: 801 AGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYV 845
G SW+ ++ H+F AGD+SH E I L++L M+D V
Sbjct: 971 PGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAVV 1015
Score = 252 bits (643), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 188/687 (27%), Positives = 319/687 (46%), Gaps = 60/687 (8%)
Query: 2 KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
++A L ++ G D T+IN Y+R+G L A LF EM + V+W ++SG+
Sbjct: 243 EEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGH 302
Query: 62 THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
+G A + F M ++ R LGSVL A + G+ VH +K
Sbjct: 303 GKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV--ANLDLGLVVHAEAIKLGLAS 360
Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
+ V + L++MY C E + A ++FE +E ++ + WN++I Y+ G++ V +LF M
Sbjct: 361 NIYVGSSLVSMYSKC-EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419
Query: 182 QREGFRYSLKPNEYTFGSLIT--AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
+ G+ +++TF SL++ AA + GS Q +++ K L +L+VG+ALV
Sbjct: 420 KSSGYNI----DDFTFTSLLSTCAASHDLEMGS----QFHSIIIKKKLAKNLFVGNALVD 471
Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLM------------------------------ 269
+A+ G AR+IFE+M ++ V+ N ++
Sbjct: 472 MYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGAC 531
Query: 270 -----------EGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMI 318
G +GK+VH ++ GL + G+ L++MY+KCG I D+R VF +
Sbjct: 532 LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Query: 319 GKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ 378
VS N +I+G QN EEA++ F M G+ S + + + +C + LG Q
Sbjct: 592 EWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ 650
Query: 379 IHGEGLKLGLDSDVS-VSNALLSLYADA-GYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
HG+ K G S+ + +LL +Y ++ G C L V W ++ + +
Sbjct: 651 FHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQN 710
Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
EA+K+Y +MR G P+ TF+ +L S S + G +H+ + +
Sbjct: 711 -GFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELT 769
Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
N L+ Y KCG+M ++F M R + VSWNS+I+GY N A+ + M Q
Sbjct: 770 SNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSH 829
Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGV-RACLEFDVVIGSALVDMYSKCGRIDYA 615
D TF VL+AC+ + G ++ + + +E V + +VD+ + G + A
Sbjct: 830 IMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEA 889
Query: 616 SRFFDLMPVR-NVYSWNSMISGYARHG 641
F + ++ + W+S++ HG
Sbjct: 890 DDFIEAQNLKPDARLWSSLLGACRIHG 916
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 166/666 (24%), Positives = 291/666 (43%), Gaps = 123/666 (18%)
Query: 71 CKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLI 130
CK+FK + R AL + G VH L +G + N ++
Sbjct: 56 CKLFKSRKVFDEMPQRLALA-------------LRIGKAVHSKSLILGIDSEGRLGNAIV 102
Query: 131 AMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSL 190
+Y C + A + F+ +E +D+ +WNS++S+
Sbjct: 103 DLYAKCAQ-VSYAEKQFDFLE-KDVTAWNSMLSM-------------------------- 134
Query: 191 KPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYA 250
YSS+ +L+ +++ + + + + S ++S AR N +
Sbjct: 135 --------------YSSIGKPGKVLRSFVSLFENQ-IFPNKFTFSIVLSTCARETNVEF- 178
Query: 251 RKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDS 310
G+++H +I+ GL G LV+MYAKC I D+
Sbjct: 179 ------------------------GRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDA 214
Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
R VF +++ ++V W + SG + G EEA++ F MR +G + + ++ +++ L
Sbjct: 215 RRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRL 274
Query: 371 GWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVI 430
G + + + GE M D V+WN +I
Sbjct: 275 GKLKDARLLFGE-----------------------------------MSSPDVVAWNVMI 299
Query: 431 GAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
+ A++Y+ +MR++ T ++L+A + LG VHA+ IK +
Sbjct: 300 SGHG-KRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGL 358
Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
A+ + ++L+S Y KC +M+ K+F + E+ D V WN+MI GY HN K M L
Sbjct: 359 ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND-VFWNAMIRGYAHNGESHKVMELFM 417
Query: 551 FMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCG 610
M G +D FTF ++LS CA+ LE G + H+ ++ L ++ +G+ALVDMY+KCG
Sbjct: 418 DMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG 477
Query: 611 RIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLS 670
++ A + F+ M R+ +WN++I Y + + +A LF +M L G + D L
Sbjct: 478 ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLK 537
Query: 671 ACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMP----I 726
AC+H + +G K +S GL L S ++D+ + G + + + +P +
Sbjct: 538 ACTHVHGLYQG-KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVV 596
Query: 727 TPNSLI 732
+ N+LI
Sbjct: 597 SMNALI 602
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 170/376 (45%), Gaps = 35/376 (9%)
Query: 476 KLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
++G VH++ + + +E + NA++ Y KC ++ EK F + +D +WNSM+S
Sbjct: 77 RIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL--EKDVTAWNSMLSM 134
Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
Y K + + + + FTF+ VLS CA +E G ++H ++ LE +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 596 VVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKL 655
G ALVDMY+KC RI A R F+ + N W + SGY + G ++A+ +F +M+
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 656 DGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAG-EL 714
+G PDH+ FV V++ G + + F MS P + ++ M+ G+ G E
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCET 309
Query: 715 DKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLAN 774
IE F N + S R+ LG+ A +G A L + A+ L +N
Sbjct: 310 VAIEYFFNMRKSSVKST--RSTLGSVLSA------IGIVANLDLGLVVHAEAIKLGLASN 361
Query: 775 MYASG------GKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLI 828
+Y K E + A K + E K + W M G + ESH
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDV--FWNAMIRG---YAHNGESH------ 410
Query: 829 YEKLKELNQKMRDAGY 844
K+ EL M+ +GY
Sbjct: 411 --KVMELFMDMKSSGY 424
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/571 (41%), Positives = 348/571 (60%), Gaps = 22/571 (3%)
Query: 377 QQIHGEGLKLGLDSDVSVSNA---------LLSLYADAGYLSRCLKVFFLMPEHDQV-SW 426
+QIH ++ G VS+S+A L+SL + +S KVF + + V W
Sbjct: 34 RQIHAFSIRHG----VSISDAELGKHLIFYLVSLPSPPP-MSYAHKVFSKIEKPINVFIW 88
Query: 427 NSVIGAFADSEALVSEAVKYYLDMRRAGW-SPNGVTFINILAAASSFSMGKLGHQVHAQV 485
N++I +A+ +S A Y +MR +G P+ T+ ++ A ++ + +LG +H+ V
Sbjct: 89 NTLIRGYAEIGNSIS-AFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 486 IKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKA 545
I+ + ++N+LL Y CG++ K+F +M E+ D V+WNS+I+G+ N +A
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK-DLVAWNSVINGFAENGKPEEA 206
Query: 546 MNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDM 605
+ L M +G + D FT ++LSACA + L G VH ++ L ++ + L+D+
Sbjct: 207 LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDL 266
Query: 606 YSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK-LDGPLPDHVT 664
Y++CGR++ A FD M +N SW S+I G A +G G +A+ LF M+ +G LP +T
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEIT 326
Query: 665 FVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
FVG+L ACSH G+V EGF++F+ M + Y + P++E F CMVDLL RAG++ K E+I M
Sbjct: 327 FVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM 386
Query: 725 PITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWED 784
P+ PN +IWRT+LGAC ++L A + ++EP ++ +YVLL+NMYAS +W D
Sbjct: 387 PMQPNVVIWRTLLGACTVHG--DSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSD 444
Query: 785 VAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGY 844
V K RK M VKK G S V + + VH F+ GD+SHP+ D IY KLKE+ ++R GY
Sbjct: 445 VQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGY 504
Query: 845 VPQTKFALFDLEPESKEDLVSYHSEKIAVAFVL-TRNSKLPIRIMKNLRVCGDCHSAFKF 903
VPQ D+E E KE+ V YHSEKIA+AF+L + + PI ++KNLRVC DCH A K
Sbjct: 505 VPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKL 564
Query: 904 ISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
+SK+ REIV+RD +RFHHF +G CSC DYW
Sbjct: 565 VSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 161/318 (50%), Gaps = 16/318 (5%)
Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNG-----------LMEGRRKGKEV 278
++++ + L+ G+A +GN A ++ +M +V + M R G+ +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
H +IRSG ++ V N L+++YA CG + + VF M KD V+WN++I+G +NG
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
EEA+ + M G+ F+++S LS+CA +G + LG+++H +K+GL ++ SN L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA-GWSP 457
L LYA G + +F M + + VSW S+I A EA++ + M G P
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA-VNGFGKEAIELFKYMESTEGLLP 322
Query: 458 NGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEK 515
+TF+ IL A S M K G + + + ++ E IE+ ++ + G++ +
Sbjct: 323 CEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE 381
Query: 516 IFARMSERRDEVSWNSMI 533
M + + V W +++
Sbjct: 382 YIKSMPMQPNVVIWRTLL 399
Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 108/198 (54%), Gaps = 8/198 (4%)
Query: 7 FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
H +++ GF +++ N+L+++Y GD+ASA K+FD+MP+++ V+W +++G+ G
Sbjct: 143 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 202
Query: 67 SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
EA ++ EM G + + + S+L AC + G G +VH ++K T + S
Sbjct: 203 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG--ALTLGKRVHVYMIKVGLTRNLHSS 260
Query: 127 NVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ-REG 185
NVL+ +Y C + A+ +F+E+ ++ +SW S+I + G +LF M+ EG
Sbjct: 261 NVLLDLYARC-GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 319
Query: 186 FRYSLKPNEYTFGSLITA 203
L P E TF ++ A
Sbjct: 320 ----LLPCEITFVGILYA 333
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 144/291 (49%), Gaps = 18/291 (6%)
Query: 36 LASASKLFDEMPDR-NSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFL-LNRYALGSVL 93
++ A K+F ++ N W ++ GY G S A +++EM +G + + + ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 94 RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
+A + + G +H +V++S V N L+ +Y +C + A ++F+++ +
Sbjct: 129 KAVTTM--ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVAS-AYKVFDKMPEK 185
Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY 213
DL++WNS+I+ +++ G L++ M +G +KP+ +T SL++A + +
Sbjct: 186 DLVAWNSVINGFAENGKPEEALALYTEMNSKG----IKPDGFTIVSLLSAC--AKIGALT 239
Query: 214 LLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR- 272
L +++ + K GL +L+ + L+ +AR G A+ +F++M+ KN VS L+ G
Sbjct: 240 LGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 299
Query: 273 -----RKGKEVHGYLIRS-GLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
++ E+ Y+ + GL G++ + CG + + FR M
Sbjct: 300 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM 350
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 24/212 (11%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
K H+ ++K G ++ N L+++Y R G + A LFDEM D+NSVSW ++ G
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301
Query: 65 GMSNEACKMFKEMVRA-GFLLNRYALGSVLRACQECG--PSGFKF--GMQVHCLVLKSNQ 119
G EA ++FK M G L +L AC CG GF++ M+ + +
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 361
Query: 120 TFDGLVSNVLIAMYGSCLESTDCARRIFEEIET----RDLISWNSIISVYSQRGDTISVF 175
F +V L+A G ++ +E I++ +++ W +++ + GD S
Sbjct: 362 HFGCMVD--LLARAGQ-------VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGD--SDL 410
Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITAAYSS 207
F+R+Q L+PN L++ Y+S
Sbjct: 411 AEFARIQ----ILQLEPNHSGDYVLLSNMYAS 438
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/670 (35%), Positives = 384/670 (57%), Gaps = 13/670 (1%)
Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
+G +VH YL++SG + N L++MY KC + VF M ++ VSW+ ++SG
Sbjct: 24 QGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHV 83
Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
NG + ++ F M R G+ + F+ + L +C L + G QIHG LK+G + V
Sbjct: 84 LNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE 143
Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
V N+L+ +Y+ G ++ KVF + + +SWN++I F + S+A+ + M+ A
Sbjct: 144 VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA-GYGSKALDTFGMMQEA 202
Query: 454 GWS--PNGVTFINILAAASSFSMGKLGHQVHAQVIK--YNVANETTIENALLSCYGKCGE 509
P+ T ++L A SS M G Q+H +++ ++ + TI +L+ Y KCG
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262
Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLS 569
+ K F ++ E+ +SW+S+I GY +AM L + + ++D F ++++
Sbjct: 263 LFSARKAFDQIKEK-TMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIG 321
Query: 570 ACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYS 629
A A L +G ++ A V+ + + +++VDMY KCG +D A + F M +++V S
Sbjct: 322 VFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVIS 381
Query: 630 WNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMS 689
W +I+GY +HG G K++ +F +M PD V ++ VLSACSH+G++ EG + F +
Sbjct: 382 WTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLL 441
Query: 690 QVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTE 749
+ +G+ P++E ++C+VDLLGRAG L + + I+ MPI PN IW+T+L + CR + E
Sbjct: 442 ETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL-SLCRVH-GDIE 499
Query: 750 LGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMK 809
LG++ +L ++ +N NYV+++N+Y G W + AR+ +KKEAG SWV ++
Sbjct: 500 LGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIE 559
Query: 810 DGVHVFVAGDESHPEKDLIYEKLKELNQKMRDA-GYVPQTKFALFDLEPESKEDLVSYHS 868
VH F +G++SHP +I E LKE +++R+ GYV K L D++ ESKE+ + HS
Sbjct: 560 REVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHS 619
Query: 869 EKIAVAFVLTR---NSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFN 924
EK+A+ L N K IR+ KNLRVC DCH K +SKI V+RD+ RFH F
Sbjct: 620 EKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFE 679
Query: 925 DGKCSCGDYW 934
DG CSCGDYW
Sbjct: 680 DGCCSCGDYW 689
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 156/567 (27%), Positives = 260/567 (45%), Gaps = 85/567 (14%)
Query: 85 NRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCAR 144
R L S+LR C G S G QVHC +LKS GS L
Sbjct: 5 QRQNLVSILRVCTRKGLS--DQGGQVHCYLLKS----------------GSGL------- 39
Query: 145 RIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAA 204
+LI+ N +I +Y + + + +K+F M +
Sbjct: 40 ---------NLITSNYLIDMYCKCREPLMAYKVFDSMPERN----------------VVS 74
Query: 205 YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVS 264
+S+++SG L DL +L S R G Y F ++
Sbjct: 75 WSALMSGHVLN-------------GDLKGSLSLFSEMGRQG-IYPNEFTFSTNLKAC--- 117
Query: 265 MNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
GL+ KG ++HG+ ++ G MV VGN LV+MY+KCG I+++ VFR ++ + +S
Sbjct: 118 --GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLIS 175
Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMS--SNFSLISTLSSCASLGWIMLGQQIHGE 382
WN MI+G G +A+ F M+ + F+L S L +C+S G I G+QIHG
Sbjct: 176 WNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGF 235
Query: 383 GLKLGL--DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
++ G S +++ +L+ LY GYL K F + E +SW+S+I +A V
Sbjct: 236 LVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFV 295
Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENAL 500
EA+ + ++ + +I+ + F++ + G Q+ A +K ET++ N++
Sbjct: 296 -EAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSV 354
Query: 501 LSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLD 560
+ Y KCG +D+ EK FA M + +D +SW +I+GY + L K++ + + M++ D
Sbjct: 355 VDMYLKCGLVDEAEKCFAEM-QLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPD 413
Query: 561 HFTFATVLSACASVATLERGME-----VHACGVRACLEFDVVIGSALVDMYSKCGRIDYA 615
+ VLSAC+ ++ G E + G++ +E + VD+ + GR+ A
Sbjct: 414 EVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACV----VDLLGRAGRLKEA 469
Query: 616 SRFFDLMPVR-NVYSWNSMISGYARHG 641
D MP++ NV W +++S HG
Sbjct: 470 KHLIDTMPIKPNVGIWQTLLSLCRVHG 496
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 214/470 (45%), Gaps = 56/470 (11%)
Query: 8 HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
H +LK G ++ N LI++Y + + A K+FD MP+RN VSW+ ++SG+ G
Sbjct: 29 HCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDL 88
Query: 68 NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
+ +F EM R G N + + L+AC + + G+Q+H LK V N
Sbjct: 89 KGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL--NALEKGLQIHGFCLKIGFEMMVEVGN 146
Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
L+ MY C + A ++F I R LISWN++I+ + G F MQ +
Sbjct: 147 SLVDMYSKCGRINE-AEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205
Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL--LSDLYVGSALVSGFARLG 245
+P+E+T SL+ A S+ + Y +QI + ++G S + +LV + + G
Sbjct: 206 E--RPDEFTLTSLLKACSSTGM--IYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCG 261
Query: 246 NFYYARKIFEQMIQKNVVSMNGLMEGR--------------------------------- 272
+ ARK F+Q+ +K ++S + L+ G
Sbjct: 262 YLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIG 321
Query: 273 --------RKGKEVHGYLIR--SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
R+GK++ ++ SGL +V N +V+MY KCG +D++ F M KD
Sbjct: 322 VFADFALLRQGKQMQALAVKLPSGL--ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDV 379
Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
+SW +I+G ++G ++++ F M R + ++ LS+C+ G I G+++ +
Sbjct: 380 ISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSK 439
Query: 383 GLKL-GLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVS-WNSVI 430
L+ G+ V ++ L AG L + MP V W +++
Sbjct: 440 LLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 209/435 (48%), Gaps = 28/435 (6%)
Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
+L+S L C G G Q+H LK G ++ SN L+ +Y KVF M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 419 PEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG 478
PE + VSW++++ + L ++ + +M R G PN TF L A + + G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKG-SLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 479 HQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIH 538
Q+H +K + N+L+ Y KCG +++ EK+F R+ + R +SWN+MI+G++H
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVD-RSLISWNAMIAGFVH 185
Query: 539 NELLPKAMNLVWFMMQRG---QRLDHFTFATVLSACASVATLERGMEVHACGVRA---CL 592
KA++ + MMQ +R D FT ++L AC+S + G ++H VR+ C
Sbjct: 186 AGYGSKALD-TFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCP 244
Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
+ GS LVD+Y KCG + A + FD + + + SW+S+I GYA+ G +A+ LF +
Sbjct: 245 SSATITGS-LVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKR 303
Query: 653 MKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIP---QLEQFSCMVDLLG 709
++ D ++ + L+ +G K M + +P + + +VD+
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQG----KQMQALAVKLPSGLETSVLNSVVDMYL 359
Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEM-----EPQ 764
+ G +D+ E+ +M + + + W V+ K LG+K+ + +EM EP
Sbjct: 360 KCGLVDEAEKCFAEMQLK-DVISWTVVI-----TGYGKHGLGKKSVRIFYEMLRHNIEPD 413
Query: 765 NAVNYVLLANMYASG 779
+L+ SG
Sbjct: 414 EVCYLAVLSACSHSG 428
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 139/292 (47%), Gaps = 21/292 (7%)
Query: 4 AKLFHLQILKHGF--AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
K H +++ GF + +L+++YV+ G L SA K FD++ ++ +SW+ ++ GY
Sbjct: 229 GKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGY 288
Query: 62 THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
+G EA +FK + ++ +AL S++ + + G Q+ L +K
Sbjct: 289 AQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFAL--LRQGKQMQALAVKLPSGL 346
Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
+ V N ++ MY C D A + F E++ +D+ISW +I+ Y + G ++F M
Sbjct: 347 ETSVLNSVVDMYLKC-GLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM 405
Query: 182 QREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
R++++P+E + ++++A S + G L ++L + G+ + + +V
Sbjct: 406 ----LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLL---ETHGIKPRVEHYACVVD 458
Query: 240 GFARLGNFYYARKIFEQM-IQKNVVSMNGLMEGRRK------GKEVHGYLIR 284
R G A+ + + M I+ NV L+ R GKEV L+R
Sbjct: 459 LLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLR 510
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/700 (34%), Positives = 387/700 (55%), Gaps = 43/700 (6%)
Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYA--KCGTIDDSRSVFRFMIGKDSVSWNTMIS 330
R+ K+ HG++IR+G F + L M A +++ +R VF + +S +WNT+I
Sbjct: 44 RQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIR 103
Query: 331 GLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLD 389
+I F M + N ++ + + A + + LGQ +HG +K +
Sbjct: 104 AYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVG 163
Query: 390 SDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLD 449
SDV V+N+L+ Y G L KVF + E D VSWNS+I F + +A++ +
Sbjct: 164 SDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ-KGSPDKALELFKK 222
Query: 450 MRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE 509
M + VT + +L+A + + G QV + + + V T+ NA+L Y KCG
Sbjct: 223 MESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS 282
Query: 510 MDDCEKIFARMSERRDEVSWNSMISGYIHNE----------LLPKAMNLVW--------- 550
++D +++F M E +D V+W +M+ GY +E +P+ + W
Sbjct: 283 IEDAKRLFDAM-EEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQ 341
Query: 551 -------------FMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
+Q+ +L+ T + LSACA V LE G +H+ + + +
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH 401
Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
+ SAL+ MYSKCG ++ + F+ + R+V+ W++MI G A HG G++A+ +F +M+
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 461
Query: 658 PLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKI 717
P+ VTF V ACSH GLVDE F M YG++P+ + ++C+VD+LGR+G L+K
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA 521
Query: 718 EEFINKMPITPNSLIWRTVLGAC-CRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMY 776
+FI MPI P++ +W +LGAC AN E+ A L E+EP+N +VLL+N+Y
Sbjct: 522 VKFIEAMPIPPSTSVWGALLGACKIHANLNLAEM---ACTRLLELEPRNDGAHVLLSNIY 578
Query: 777 ASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELN 836
A GKWE+V++ RK M+ +KKE GCS + + +H F++GD +HP + +Y KL E+
Sbjct: 579 AKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVM 638
Query: 837 QKMRDAGYVPQTKFALFDLEPES-KEDLVSYHSEKIAVAF-VLTRNSKLPIRIMKNLRVC 894
+K++ GY P+ L +E E KE ++ HSEK+A+ + +++ + IR++KNLRVC
Sbjct: 639 EKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVC 698
Query: 895 GDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
GDCHS K IS++ REI++RD RFHHF +G+CSC D+W
Sbjct: 699 GDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/515 (26%), Positives = 241/515 (46%), Gaps = 49/515 (9%)
Query: 34 GDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV-RAGFLLNRYALGSV 92
L A K+FDE+P NS +W ++ Y + F +MV + N+Y +
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 93 LRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIET 152
++A E S G +H + +KS D V+N LI Y SC + D A ++F I+
Sbjct: 138 IKAAAEV--SSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD-LDSACKVFTTIKE 194
Query: 153 RDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGS 212
+D++SWNS+I+ + Q+G +LF +M+ E +K + T +++A + +
Sbjct: 195 KDVVSWNSMINGFVQKGSPDKALELFKKMESE----DVKASHVTMVGVLSAC--AKIRNL 248
Query: 213 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR 272
+Q+ + +++ + +L + +A++ + + G+ A+++F+ M +K+ V+ +++G
Sbjct: 249 EFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG- 307
Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
YA + +R V M KD V+WN +IS
Sbjct: 308 ----------------------------YAISEDYEAAREVLNSMPQKDIVAWNALISAY 339
Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
+QNG EA++ F ++ M N +L+STLS+CA +G + LG+ IH K G+ +
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMN 399
Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
V++AL+ +Y+ G L + +VF + + D W+++IG A +EAV + M+
Sbjct: 400 FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA-MHGCGNEAVDMFYKMQ 458
Query: 452 RAGWSPNGVTFINILAAASSFSM----GKLGHQVHAQVIKYNVANETTIENALLSCYGKC 507
A PNGVTF N+ A S + L HQ+ + Y + E ++ G+
Sbjct: 459 EANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN---YGIVPEEKHYACIVDVLGRS 515
Query: 508 GEMDDCEKIFARMSERRDEVSWNSMISG-YIHNEL 541
G ++ K M W +++ IH L
Sbjct: 516 GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANL 550
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 174/383 (45%), Gaps = 48/383 (12%)
Query: 7 FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
H +K DVF+ N+LI+ Y GDL SA K+F + +++ VSW +++G+ KG
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 67 SNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS 126
++A ++FK+M + + VL AC + +FG QV + ++ + ++
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKI--RNLEFGRQVCSYIEENRVNVNLTLA 270
Query: 127 NVLIAMYGSC------------------------------LESTDCARRIFEEIETRDLI 156
N ++ MY C E + AR + + +D++
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 330
Query: 157 SWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ 216
+WN++IS Y Q G +F +Q + ++K N+ T S ++A + + L +
Sbjct: 331 AWNALISAYEQNGKPNEALIVFHELQ---LQKNMKLNQITLVSTLSAC--AQVGALELGR 385
Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-- 274
I + +KK G+ + +V SAL+ +++ G+ +R++F + +++V + ++ G
Sbjct: 386 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG 445
Query: 275 -GKEVHGYLIRSGLFDMVAVGNGLVNMYAKC---GTIDDSRSVFRFM-----IGKDSVSW 325
G E + ++ G N++ C G +D++ S+F M I + +
Sbjct: 446 CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHY 505
Query: 326 NTMISGLDQNGCYEEAIMNFCAM 348
++ L ++G E+A+ AM
Sbjct: 506 ACIVDVLGRSGYLEKAVKFIEAM 528
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 247/668 (36%), Positives = 367/668 (54%), Gaps = 43/668 (6%)
Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
R + VH +I L ++G L+ YA + +R VF + ++ + N MI
Sbjct: 56 RTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSY 115
Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
NG Y E + F M + +++ L +C+ G I++G++IHG K+GL S +
Sbjct: 116 VNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175
Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
V N L+S+Y G+LS V M D VSWNS++ +A ++ +A++ +M
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRF-DDALEVCREMES 234
Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
S + T ++L A S+ TT EN +
Sbjct: 235 VKISHDAGTMASLLPAVSN----------------------TTTENVMY----------- 261
Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACA 572
+ +F +M ++ VSWN MI Y+ N + +A+ L M G D + +VL AC
Sbjct: 262 VKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACG 320
Query: 573 SVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNS 632
+ L G ++H R L ++++ +AL+DMY+KCG ++ A F+ M R+V SW +
Sbjct: 321 DTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTA 380
Query: 633 MISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVY 692
MIS Y G G A+ LFS+++ G +PD + FV L+ACSHAGL++EG FK M+ Y
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHY 440
Query: 693 GLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR 752
+ P+LE +CMVDLLGRAG++ + FI M + PN +W +LGA CR + T++G
Sbjct: 441 KITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA-CRVHS-DTDIGL 498
Query: 753 KAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGV 812
AA+ LF++ P+ + YVLL+N+YA G+WE+V R MK +KK G S V + +
Sbjct: 499 LAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRII 558
Query: 813 HVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIA 872
H F+ GD SHP+ D IY +L L +KM++ GYVP ++ AL D+E E KE ++ HSEK+A
Sbjct: 559 HTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLA 618
Query: 873 VAFVL------TRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
+ F L +S IRI KNLR+CGDCH A K IS+I REI++RD+NRFH F G
Sbjct: 619 IVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFG 678
Query: 927 KCSCGDYW 934
CSCGDYW
Sbjct: 679 VCSCGDYW 686
Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 182/382 (47%), Gaps = 19/382 (4%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
+ H +I+ + L L+ Y + D+ASA K+FDE+P+RN + ++ Y +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 65 GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
G E K+F M + Y VL+AC G G ++H K +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGT--IVIGRKIHGSATKVGLSSTLF 176
Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
V N L++MYG C ++ AR + +E+ RD++SWNS++ Y+Q ++ M+
Sbjct: 177 VGNGLVSMYGKCGFLSE-ARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMES- 234
Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLS-DLYVGSALVSGFAR 243
+ + T SL+ A ++ ++ + + K L+S ++ +G + +
Sbjct: 235 ---VKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPV 291
Query: 244 LGNFYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVGNGL 297
Y+R + + + VS+ ++ GK++HGY+ R L + + N L
Sbjct: 292 EAVELYSR-MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENAL 350
Query: 298 VNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMIS--GLDQNGCYEEAIMNFCAMRRDGLMS 355
++MYAKCG ++ +R VF M +D VSW MIS G GC +A+ F ++ GL+
Sbjct: 351 IDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGC--DAVALFSKLQDSGLVP 408
Query: 356 SNFSLISTLSSCASLGWIMLGQ 377
+ + ++TL++C+ G + G+
Sbjct: 409 DSIAFVTTLAACSHAGLLEEGR 430
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 243/661 (36%), Positives = 370/661 (55%), Gaps = 46/661 (6%)
Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
SVF+ + + + WNTM G + A+ + M GL+ ++++ L SCA
Sbjct: 89 SVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSK 148
Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLY----------------------------- 402
GQQIHG LKLG D D+ V +L+S+Y
Sbjct: 149 AFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIK 208
Query: 403 --ADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
A GY+ K+F +P D VSWN++I +A++ EA++ + DM + P+
Sbjct: 209 GYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAET-GNYKEALELFKDMMKTNVRPDES 267
Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARM 520
T + +++A + +LG QVH + + + I NAL+ Y KCGE++ +F R+
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 327
Query: 521 SERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG 580
+D +SWN++I GY H L +A+ L M++ G+ + T ++L ACA + ++ G
Sbjct: 328 P-YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 581 MEVHAC------GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMI 634
+H GV + ++L+DMY+KCG I+ A + F+ + +++ SWN+MI
Sbjct: 387 RWIHVYIDKRLKGVTNASS----LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442
Query: 635 SGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGL 694
G+A HG D + LFS+M+ G PD +TFVG+LSACSH+G++D G F++M+Q Y +
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 502
Query: 695 IPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKA 754
P+LE + CM+DLLG +G + EE IN M + P+ +IW ++L AC ELG
Sbjct: 503 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHG--NVELGESF 560
Query: 755 ANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHV 814
A L ++EP+N +YVLL+N+YAS G+W +VAK R + + +KK GCS + + VH
Sbjct: 561 AENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHE 620
Query: 815 FVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVA 874
F+ GD+ HP IY L+E+ + AG+VP T L ++E E KE + +HSEK+A+A
Sbjct: 621 FIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 680
Query: 875 F-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDY 933
F +++ + I+KNLRVC +CH A K ISKI REI+ RD RFHHF DG CSC DY
Sbjct: 681 FGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDY 740
Query: 934 W 934
W
Sbjct: 741 W 741
Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 221/493 (44%), Gaps = 66/493 (13%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYV---RVGDLASASKLFDEMPDRNSVSWACIVSGY 61
++ H Q++K G + + LI + L A +F + + N + W + G+
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109
Query: 62 THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
A K++ M+ G L N Y VL++C + FK G Q+H VLK
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKS--KAFKEGQQIHGHVLKLGCDL 167
Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
D V LI+MY D A ++F++ RD++S+ ++I Y+ RG + KLF +
Sbjct: 168 DLYVHTSLISMYVQNGRLED-AHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEI 226
Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
+ D+ +A++SG+
Sbjct: 227 P---------------------------------------------VKDVVSWNAMISGY 241
Query: 242 ARLGNFYYARKIFEQMIQKNV----------VSMNGLMEGRRKGKEVHGYLIRSGLFDMV 291
A GN+ A ++F+ M++ NV VS G++VH ++ G +
Sbjct: 242 AETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNL 301
Query: 292 AVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRD 351
+ N L+++Y+KCG ++ + +F + KD +SWNT+I G Y+EA++ F M R
Sbjct: 302 KIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 361
Query: 352 GLMSSNFSLISTLSSCASLGWIMLGQQIH---GEGLKLGLDSDVSVSNALLSLYADAGYL 408
G ++ +++S L +CA LG I +G+ IH + LK G+ + S+ +L+ +YA G +
Sbjct: 362 GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK-GVTNASSLRTSLIDMYAKCGDI 420
Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
+VF + SWN++I FA + + MR+ G P+ +TF+ +L+A
Sbjct: 421 EAAHQVFNSILHKSLSSWNAMIFGFA-MHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
Query: 469 ASSFSMGKLGHQV 481
S M LG +
Sbjct: 480 CSHSGMLDLGRHI 492
Score = 164 bits (414), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 190/402 (47%), Gaps = 38/402 (9%)
Query: 357 NFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY---LSRCLK 413
N +S L +C +L + + IH + +K+GL + + L+ + + L +
Sbjct: 33 NHPSLSLLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAIS 89
Query: 414 VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFS 473
VF + E + + WN++ A S VS A+K Y+ M G PN TF +L + +
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVS-ALKLYVCMISLGLLPNSYTFPFVLKSCAKSK 148
Query: 474 MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSER---------- 523
K G Q+H V+K + + +L+S Y + G ++D K+F + R
Sbjct: 149 AFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIK 208
Query: 524 --------------------RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFT 563
+D VSWN+MISGY +A+ L MM+ R D T
Sbjct: 209 GYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST 268
Query: 564 FATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMP 623
TV+SACA ++E G +VH ++ I +AL+D+YSKCG ++ A F+ +P
Sbjct: 269 MVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP 328
Query: 624 VRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEG-F 682
++V SWN++I GY +AL LF +M G P+ VT + +L AC+H G +D G +
Sbjct: 329 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 388
Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKM 724
H ++ G+ + ++D+ + G+++ + N +
Sbjct: 389 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 192/417 (46%), Gaps = 34/417 (8%)
Query: 19 DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
DV LI Y G + +A KLFDE+P ++ VSW ++SGY G EA ++FK+M+
Sbjct: 199 DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM 258
Query: 79 RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
+ + + +V+ AC + G + G QVH + + + N LI +Y C E
Sbjct: 259 KTNVRPDESTMVTVVSACAQSG--SIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 139 -STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTF 197
T C +FE + +D+ISWN++I Y+ LF M R G PN+ T
Sbjct: 317 LETACG--LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG----ETPNDVTM 370
Query: 198 GSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
S++ A ++ G ++ I +K G+ + + ++L+ +A+ G+ A ++F
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLK--GVTNASSLRTSLIDMYAKCGDIEAAHQVFN 428
Query: 256 QMIQKNVVSMNGL-----MEGRRKGK-EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDD 309
++ K++ S N + M GR ++ + + G+ GL++ + G +D
Sbjct: 429 SILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDL 488
Query: 310 SRSVFRFMIGKDSVS-----WNTMISGLDQNGCYEEAIMNFCAMRR--DGLMSSNFSLIS 362
R +FR M ++ + MI L +G ++EA M DG++ S
Sbjct: 489 GRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVI-----WCS 543
Query: 363 TLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLKVFFLM 418
L +C G + LG+ E L + ++ + S LLS +YA AG + K L+
Sbjct: 544 LLKACKMHGNVELGESF-AENL-IKIEPENPGSYVLLSNIYASAGRWNEVAKTRALL 598
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 140/306 (45%), Gaps = 41/306 (13%)
Query: 481 VHAQVIKY-----NVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG 535
+HAQ+IK N A IE +LS + + + +F + E + + WN+M G
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFE--GLPYAISVFKTIQEP-NLLIWNTMFRG 108
Query: 536 YIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFD 595
+ + A+ L M+ G + +TF VL +CA + G ++H ++ + D
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168
Query: 596 VVIGSALVDMYSKCGRID-----------------------YASR--------FFDLMPV 624
+ + ++L+ MY + GR++ YASR FD +PV
Sbjct: 169 LYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPV 228
Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
++V SWN+MISGYA G+ +AL LF M PD T V V+SAC+ +G ++ G +
Sbjct: 229 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG-RQ 287
Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
+G L+ + ++DL + GEL+ ++P + + W T++G N
Sbjct: 288 VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGGYTHMN 346
Query: 745 CRKTEL 750
K L
Sbjct: 347 LYKEAL 352
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust.
Identities = 251/766 (32%), Positives = 408/766 (53%), Gaps = 72/766 (9%)
Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLIT 202
A F + RD++SWNS++S Y Q G+++ ++F M REG + + TF ++
Sbjct: 133 ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGR----TFAIILK 188
Query: 203 AAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNV 262
S L + L QI +V + G +D+ SAL+ +A+ F + ++F+ + +KN
Sbjct: 189 VC--SFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS 246
Query: 263 VSMNGLMEG-----------------------------------------RRKGKEVHGY 281
VS + ++ G R G ++H +
Sbjct: 247 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAH 306
Query: 282 LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEA 341
++S V ++MYAKC + D++ +F + S+N MI+G Q +A
Sbjct: 307 ALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKA 366
Query: 342 IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSL 401
++ F + GL SL +CA + + G QI+G +K L DV V+NA + +
Sbjct: 367 LLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDM 426
Query: 402 YADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVT 461
Y L+ +VF M D VSWN++I A + E + ++ M R+ P+ T
Sbjct: 427 YGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH-EQNGKGYETLFLFVSMLRSRIEPDEFT 485
Query: 462 FINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMS 521
F +IL A + S+G G ++H+ ++K +A+ +++ +L+ Y KCG +++ EKI +R
Sbjct: 486 FGSILKACTGGSLG-YGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFF 544
Query: 522 ERRDE-------------------VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHF 562
+R + VSWNS+ISGY+ E A L MM+ G D F
Sbjct: 545 QRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKF 604
Query: 563 TFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLM 622
T+ATVL CA++A+ G ++HA ++ L+ DV I S LVDMYSKCG + + F+
Sbjct: 605 TYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKS 664
Query: 623 PVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGF 682
R+ +WN+MI GYA HG G++A+ LF +M L+ P+HVTF+ +L AC+H GL+D+G
Sbjct: 665 LRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGL 724
Query: 683 KHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
++F M + YGL PQL +S MVD+LG++G++ + E I +MP + +IWRT+LG C
Sbjct: 725 EYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCT- 783
Query: 743 ANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAG 802
+ E+ +A L ++PQ++ Y LL+N+YA G WE V+ R+ M+ ++KKE G
Sbjct: 784 IHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPG 843
Query: 803 CSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR---DAGYV 845
CSWV +KD +HVF+ GD++HP + IYE+L + +M+ D+ +V
Sbjct: 844 CSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFV 889
Score = 233 bits (595), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 182/669 (27%), Positives = 322/669 (48%), Gaps = 78/669 (11%)
Query: 19 DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
DV N +IN Y + D+ A+ F+ MP R+ VSW ++SGY G S ++ ++F +M
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172
Query: 79 RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
R G + +L+ C + GMQ+H +V++ D + ++ L+ MY
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTS--LGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
+ + R+F+ I ++ +SW++II+ Q K F MQ + + ++ +
Sbjct: 231 FVE-SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ----KVNAGVSQSIYA 285
Query: 199 SLIT--AAYSSVLSGSYLLQQIL-------AMVKKAGLLSDLYVG--------------- 234
S++ AA S + G L L +V+ A L D+Y
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL--DMYAKCDNMQDAQILFDNSE 343
Query: 235 -------SALVSGFARLGNFYYARKIFEQMIQKNV----VSMNG------LMEGRRKGKE 277
+A+++G+++ + + A +F +++ + +S++G L++G +G +
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 403
Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
++G I+S L V V N ++MY KC + ++ VF M +D+VSWN +I+ +QNG
Sbjct: 404 IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 463
Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCA--SLGWIMLGQQIHGEGLKLGLDSDVSVS 395
E + F +M R + F+ S L +C SLG+ G +IH +K G+ S+ SV
Sbjct: 464 GYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGY---GMEIHSSIVKSGMASNSSVG 520
Query: 396 NALLSLYADAGYLSRCLKV---FF-----------LMPEHDQ------VSWNSVIGAFAD 435
+L+ +Y+ G + K+ FF L H++ VSWNS+I +
Sbjct: 521 CSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVM 580
Query: 436 SEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
E +A + M G +P+ T+ +L ++ + LG Q+HAQVIK + ++
Sbjct: 581 KEQ-SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVY 639
Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR 555
I + L+ Y KCG++ D +F + S RRD V+WN+MI GY H+ +A+ L M+
Sbjct: 640 ICSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE 698
Query: 556 GQRLDHFTFATVLSACASVATLERGMEVHACGVRAC-LEFDVVIGSALVDMYSKCGRIDY 614
+ +H TF ++L ACA + +++G+E R L+ + S +VD+ K G++
Sbjct: 699 NIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKR 758
Query: 615 ASRFFDLMP 623
A MP
Sbjct: 759 ALELIREMP 767
Score = 229 bits (584), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 160/544 (29%), Positives = 260/544 (47%), Gaps = 59/544 (10%)
Query: 295 NGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
N ++N Y+K + + S F M +D VSWN+M+SG QNG ++I F M R+G+
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
+ L C+ L LG QIHG +++G D+DV ++ALL +YA L+V
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
F +PE + VSW+++I + L+S A+K++ +M++ + + ++L + ++ S
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNN-LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 296
Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
+LG Q+HA +K + A + + A L Y KC M D + +F SE + S+N+MI+
Sbjct: 297 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN-SENLNRQSYNAMIT 355
Query: 535 GYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEF 594
GY E KA+ L +M G D + + V ACA V L G++++ +++ L
Sbjct: 356 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL 415
Query: 595 DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMK 654
DV + +A +DMY KC + A R FD M R+ SWN++I+ + ++G G + L LF M
Sbjct: 416 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 475
Query: 655 LDGPLPDHVTFVGVLSACS----------HAGLVDEGFKHFKS-------MSQVYGLIPQ 697
PD TF +L AC+ H+ +V G S M G+I +
Sbjct: 476 RSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEE 535
Query: 698 LEQF-SCMVDLLGRAGELDKIEEFINK--------------------------------- 723
E+ S +G ++++E+ NK
Sbjct: 536 AEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM 595
Query: 724 -MPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV--LLANMYASGG 780
M ITP+ + TVL C AN LG++ + + E Q+ V Y+ L +MY+ G
Sbjct: 596 EMGITPDKFTYATVLDTC--ANLASAGLGKQIHAQVIKKELQSDV-YICSTLVDMYSKCG 652
Query: 781 KWED 784
D
Sbjct: 653 DLHD 656
Score = 186 bits (473), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 145/587 (24%), Positives = 265/587 (45%), Gaps = 71/587 (12%)
Query: 8 HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
H +++ G DV + L+++Y + + ++F +P++NSVSW+ I++G +
Sbjct: 203 HGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLL 262
Query: 68 NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
+ A K FKEM + +++ SVLR+C S + G Q+H LKS+ DG+V
Sbjct: 263 SLALKFFKEMQKVNAGVSQSIYASVLRSC--AALSELRLGGQLHAHALKSDFAADGIVRT 320
Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
+ MY C D A+ +F+ E + S+N++I+ YSQ LF R+ G
Sbjct: 321 ATLDMYAKCDNMQD-AQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLG 379
Query: 188 YSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
+ +E + + A +++ G QI + K+ L D+ V +A + + +
Sbjct: 380 F----DEISLSGVFRAC--ALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQAL 433
Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRK--------------------------------- 274
A ++F++M +++ VS N ++ +
Sbjct: 434 AEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC 493
Query: 275 -------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVF-RFM--------- 317
G E+H +++SG+ +VG L++MY+KCG I+++ + RF
Sbjct: 494 TGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTM 553
Query: 318 ----------IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSC 367
+ + VSWN++ISG E+A M F M G+ F+ + L +C
Sbjct: 554 EELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC 613
Query: 368 ASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWN 427
A+L LG+QIH + +K L SDV + + L+ +Y+ G L +F D V+WN
Sbjct: 614 ANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWN 673
Query: 428 SVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK 487
++I +A EA++ + M PN VTFI+IL A + + G + + +
Sbjct: 674 AMICGYA-HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKR 732
Query: 488 -YNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
Y + + + ++ GK G++ ++ M D+V W +++
Sbjct: 733 DYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 779
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 172/370 (46%), Gaps = 40/370 (10%)
Query: 355 SSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
++NFS + CA G + LG+Q H + G V N LL +Y ++ V
Sbjct: 48 TTNFSFV--FKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMV 105
Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVS------------------------------EAV 444
F MP D VSWN +I ++ S + +++
Sbjct: 106 FDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSI 165
Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
+ ++DM R G +G TF IL S LG Q+H V++ + +ALL Y
Sbjct: 166 EVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMY 225
Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
K + ++F + E ++ VSW+++I+G + N LL A+ M + + +
Sbjct: 226 AKGKRFVESLRVFQGIPE-KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIY 284
Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
A+VL +CA+++ L G ++HA +++ D ++ +A +DMY+KC + A FD
Sbjct: 285 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSEN 344
Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
N S+N+MI+GY++ HG KAL LF ++ G D ++ GV AC+ + EG
Sbjct: 345 LNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL-- 402
Query: 685 FKSMSQVYGL 694
Q+YGL
Sbjct: 403 -----QIYGL 407
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 194/441 (43%), Gaps = 90/441 (20%)
Query: 12 LKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEAC 71
+K + DV + N I++Y + LA A ++FDEM R++VSW I++ + G E
Sbjct: 409 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 468
Query: 72 KMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIA 131
+F M+R+ + + GS+L+AC +GM++H ++KS + V LI
Sbjct: 469 FLFVSMLRSRIEPDEFTFGSILKACT---GGSLGYGMEIHSSIVKSGMASNSSVGCSLID 525
Query: 132 MYGSC---LESTDCARRIF---------EEIETRD-------LISWNSIISVYSQRGDTI 172
MY C E+ R F EE+E +SWNSIIS Y + +
Sbjct: 526 MYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSE 585
Query: 173 SVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLY 232
LF+RM G + P+++T+ +++ + L+ + L +QI A V K L SD+Y
Sbjct: 586 DAQMLFTRMMEMG----ITPDKFTYATVLDTCAN--LASAGLGKQIHAQVIKKELQSDVY 639
Query: 233 VGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVA 292
+ S LV +++ G+ + +R +FE+ ++++ V+ N ++ G
Sbjct: 640 ICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICG--------------------- 678
Query: 293 VGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDG 352
YA G +++ +F MI +
Sbjct: 679 --------YAHHGKGEEAIQLFERMI-------------------------------LEN 699
Query: 353 LMSSNFSLISTLSSCASLGWIMLG-QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRC 411
+ ++ + IS L +CA +G I G + + GLD + + ++ + +G + R
Sbjct: 700 IKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRA 759
Query: 412 LKVFFLMP-EHDQVSWNSVIG 431
L++ MP E D V W +++G
Sbjct: 760 LELIREMPFEADDVIWRTLLG 780
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 112/260 (43%), Gaps = 50/260 (19%)
Query: 524 RDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEV 583
R VS+N ++ I +P F+ Q + F+ V CA LE G +
Sbjct: 12 RSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVNS-VSTTNFSFVFKECAKQGALELGKQA 70
Query: 584 HA----CGVRA------CL--------EF-------------DVVIGSALVDMYSKCGRI 612
HA G R CL +F DVV + +++ YSK +
Sbjct: 71 HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDM 130
Query: 613 DYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSAC 672
A+ FF++MPVR+V SWNSM+SGY ++G K++ +F M +G D TF +L C
Sbjct: 131 FKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVC 190
Query: 673 SHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELD---KIEEFINKMPI--- 726
S G Q++G++ ++ C D++ + LD K + F+ + +
Sbjct: 191 SFLEDTSLGM-------QIHGIVVRV---GCDTDVVAASALLDMYAKGKRFVESLRVFQG 240
Query: 727 --TPNSLIWRTVLGACCRAN 744
NS+ W ++ C + N
Sbjct: 241 IPEKNSVSWSAIIAGCVQNN 260
Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
K H Q++K DV++C+TL+++Y + GDL + +F++ R+ V+W ++ GY H
Sbjct: 623 KQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHH 682
Query: 65 GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
G EA ++F+ M+ N S+LRAC G
Sbjct: 683 GKGEEAIQLFERMILENIKPNHVTFISILRACAHMG 718
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 255/715 (35%), Positives = 389/715 (54%), Gaps = 87/715 (12%)
Query: 297 LVNMYAKCGTIDDSRSVFR--FMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLM 354
+V+ Y G I +R VF + +D+V +N MI+G N AI FC M+ +G
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 355 SSNFSLISTLSSCASLGWIMLGQ----QIHGEGLKLGLDSDVSVSNALLSLYA----DAG 406
NF+ S L A L + + Q H LK G SVSNAL+S+Y+
Sbjct: 146 PDNFTFASVL---AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPS 202
Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFA----------------DSEALVS--------- 441
L KVF + E D+ SW +++ + D+ LV+
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYV 262
Query: 442 ------EAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT 495
EA++ M +G + T+ +++ A ++ + +LG QVHA V++ +
Sbjct: 263 NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFS-FH 321
Query: 496 IENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHN------ELLPKAMN-- 547
+N+L+S Y KCG+ D+ IF +M + D VSWN+++SGY+ + +L+ K M
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFKEMKEK 380
Query: 548 --LVWFMMQRGQRLDHF---------------------TFATVLSACASVATLERGMEVH 584
L W +M G + F F+ + +CA + G + H
Sbjct: 381 NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYH 440
Query: 585 ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGD 644
A ++ + + G+AL+ MY+KCG ++ A + F MP + SWN++I+ +HGHG
Sbjct: 441 AQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGA 500
Query: 645 KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCM 704
+A+ ++ +M G PD +T + VL+ACSHAGLVD+G K+F SM VY + P + ++ +
Sbjct: 501 EAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARL 560
Query: 705 VDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ 764
+DLL R+G+ E I +P P + IW +L CR + ELG AA+ LF + P+
Sbjct: 561 IDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG-CRVH-GNMELGIIAADKLFGLIPE 618
Query: 765 NAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPE 824
+ Y+LL+NM+A+ G+WE+VA+ RK M++ VKKE CSW+ M+ VH F+ D SHPE
Sbjct: 619 HDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPE 678
Query: 825 KDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPES-KEDLVSYHSEKIAVAFVLTRNSKL 883
+ +Y L++L ++MR GYVP T F L D+E + KED+++ HSEKIAVAF L KL
Sbjct: 679 AEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLM---KL 735
Query: 884 P----IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
P IRI KNLR CGDCH+ F+F+S +V R+I+LRD RFHHF +G+CSCG++W
Sbjct: 736 PPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 199 bits (507), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 160/601 (26%), Positives = 261/601 (43%), Gaps = 107/601 (17%)
Query: 4 AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEM--PD------------- 48
A+ H I+ GF + N LI+VY + +L A +LFDE+ PD
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 49 ------------------RNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
R++V + +++G++H A +F +M GF + +
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152
Query: 91 SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTD---CARRIF 147
SVL K +Q H LKS + VSN L+++Y C S AR++F
Sbjct: 153 SVLAGLALVADDE-KQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVF 211
Query: 148 EEIETRD--------------------------------LISWNSIISVYSQRGDTISVF 175
+EI +D L+++N++IS Y RG
Sbjct: 212 DEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEAL 271
Query: 176 KLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGS 235
++ RM G ++ +E+T+ S+I A ++ L L +Q+ A V + S + +
Sbjct: 272 EMVRRMVSSG----IELDEFTYPSVIRACATAGL--LQLGKQVHAYVLRREDFS-FHFDN 324
Query: 236 ALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGN 295
+LVS + + G F AR IFE+M K++VS N L+ G
Sbjct: 325 SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSG------------------------ 360
Query: 296 GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMS 355
Y G I +++ +F+ M K+ +SW MISGL +NG EE + F M+R+G
Sbjct: 361 -----YVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEP 415
Query: 356 SNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVF 415
+++ + SCA LG GQQ H + LK+G DS +S NAL+++YA G + +VF
Sbjct: 416 CDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVF 475
Query: 416 FLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMG 475
MP D VSWN++I A +EAV Y +M + G P+ +T + +L A S +
Sbjct: 476 RTMPCLDSVSWNALIAALG-QHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLV 534
Query: 476 KLGHQ-VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
G + + Y + L+ + G+ D E + + + W +++S
Sbjct: 535 DQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLS 594
Query: 535 G 535
G
Sbjct: 595 G 595
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 137/495 (27%), Positives = 206/495 (41%), Gaps = 124/495 (25%)
Query: 7 FHLQILKHGFAYDVFLCNTLINVYVRVGD----LASASKLFDEMPDRNSVSWA------- 55
FH LK G Y + N L++VY + L SA K+FDE+ +++ SW
Sbjct: 171 FHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYV 230
Query: 56 -------------------------CIVSGYTHKGMSNEACKMFKEMVRAGFLLNRYALG 90
++SGY ++G EA +M + MV +G L+ +
Sbjct: 231 KNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYP 290
Query: 91 SVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEI 150
SV+RAC G + G QVH VL+ + F N L+++Y C D AR IFE++
Sbjct: 291 SVIRACATAGL--LQLGKQVHAYVLR-REDFSFHFDNSLVSLYYKC-GKFDEARAIFEKM 346
Query: 151 ETRDLISWNSIISVY---SQRGDTISVF----------------------------KLFS 179
+DL+SWN+++S Y G+ +F KLFS
Sbjct: 347 PAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFS 406
Query: 180 RMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
M+REGF +P +Y F I + +VL QQ A + K G S L G+AL++
Sbjct: 407 CMKREGF----EPCDYAFSGAIKSC--AVLGAYCNGQQYHAQLLKIGFDSSLSAGNALIT 460
Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVG----- 294
+A+ G AR++F M + VS N L+ G+ HG +M+ G
Sbjct: 461 MYAKCGVVEEARQVFRTMPCLDSVSWNALIAAL--GQHGHGAEAVDVYEEMLKKGIRPDR 518
Query: 295 NGLVNMYAKC---GTIDDSRSVFRFMIGKDSVSWNTMI-SGLDQNGCYEEAIMNFCAMRR 350
L+ + C G +D R F DS+ I G D Y I C R
Sbjct: 519 ITLLTVLTACSHAGLVDQGRKYF------DSMETVYRIPPGADH---YARLIDLLC---R 566
Query: 351 DGLMSSNFSLISTLS-SCASLGW--IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGY 407
G S S+I +L + W ++ G ++HG ++LG+ + AD
Sbjct: 567 SGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG-NMELGI------------IAAD--- 610
Query: 408 LSRCLKVFFLMPEHD 422
K+F L+PEHD
Sbjct: 611 -----KLFGLIPEHD 620
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 139/310 (44%), Gaps = 20/310 (6%)
Query: 17 AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKE 76
A D+ N L++ YV G + A +F EM ++N +SW ++SG G E K+F
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407
Query: 77 MVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVS--NVLIAMYG 134
M R GF YA +++C G + G Q H +LK FD +S N LI MY
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLG--AYCNGQQYHAQLLKIG--FDSSLSAGNALITMYA 463
Query: 135 SCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNE 194
C + AR++F + D +SWN++I+ Q G ++ M ++G R P+
Sbjct: 464 KC-GVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIR----PDR 518
Query: 195 YTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKI 253
T +++TA +++ ++ + V + +D Y + L+ R G F A +
Sbjct: 519 ITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHY--ARLIDLLCRSGKFSDAESV 576
Query: 254 FEQMIQKNVVSM-NGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTI 307
E + K + L+ G R G G + LF ++ +G L NM+A G
Sbjct: 577 IESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQW 636
Query: 308 DDSRSVFRFM 317
++ V + M
Sbjct: 637 EEVARVRKLM 646
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/585 (38%), Positives = 347/585 (59%), Gaps = 14/585 (2%)
Query: 356 SNFSLI-STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKV 414
SN +L+ L CA G +M + HG+ +++ L+ DV++ N L++ Y+ G++ +V
Sbjct: 59 SNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQV 118
Query: 415 FFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSM 474
F M E VSWN++IG + + + SEA+ +L+MR G+ + T ++L+A
Sbjct: 119 FDGMLERSLVSWNTMIGLYTRNR-MESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCD 177
Query: 475 GKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMIS 534
++H +K + + ALL Y KCG + D ++F M ++ V+W+SM++
Sbjct: 178 ALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK-SSVTWSSMVA 236
Query: 535 GYIHNELLPKAMNLVWFMMQRGQRL----DHFTFATVLSACASVATLERGMEVHACGVRA 590
GY+ N+ +A+ + +R QR+ + FT ++V+ AC+++A L G ++HA ++
Sbjct: 237 GYVQNKNYEEAL----LLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKS 292
Query: 591 CLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLF 650
+V + S+ VDMY+KCG + + F + +N+ WN++ISG+A+H + + LF
Sbjct: 293 GFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILF 352
Query: 651 SQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGR 710
+M+ DG P+ VTF +LS C H GLV+EG + FK M YGL P + +SCMVD+LGR
Sbjct: 353 EKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGR 412
Query: 711 AGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYV 770
AG L + E I +P P + IW ++L A CR + EL AA LFE+EP+NA N+V
Sbjct: 413 AGLLSEAYELIKSIPFDPTASIWGSLL-ASCRVY-KNLELAEVAAEKLFELEPENAGNHV 470
Query: 771 LLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYE 830
LL+N+YA+ +WE++AK+RK +++ +VKK G SW+ +KD VH F G+ HP I
Sbjct: 471 LLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICS 530
Query: 831 KLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF-VLTRNSKLPIRIMK 889
L L K R GY P + L D+E KE+L+ HSEK+A+ F ++ P+RIMK
Sbjct: 531 TLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMK 590
Query: 890 NLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
NLR+C DCH K S R I++RD NRFHHF+DG CSCGD+W
Sbjct: 591 NLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 159 bits (403), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 196/398 (49%), Gaps = 13/398 (3%)
Query: 243 RLGNFYYARKIFEQMIQKNVVSMNG-LMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMY 301
R N + R + +++Q + + NG +ME K HG +IR L V + N L+N Y
Sbjct: 53 RYSNEFSNRNLVHEILQ--LCARNGAVMEA----KACHGKIIRIDLEGDVTLLNVLINAY 106
Query: 302 AKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLI 361
+KCG ++ +R VF M+ + VSWNTMI +N EA+ F MR +G S F++
Sbjct: 107 SKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTIS 166
Query: 362 STLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEH 421
S LS+C + +++H +K +D ++ V ALL LYA G + ++VF M +
Sbjct: 167 SVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK 226
Query: 422 DQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQV 481
V+W+S++ + ++ EA+ Y +R N T +++ A S+ + G Q+
Sbjct: 227 SSVTWSSMVAGYVQNKNY-EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQM 285
Query: 482 HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNEL 541
HA + K + + ++ + Y KCG + + IF+ + E+ E+ WN++ISG+ +
Sbjct: 286 HAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLEL-WNTIISGFAKHAR 344
Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRAC--LEFDVVIG 599
+ M L M Q G + TF+++LS C +E G +R L +VV
Sbjct: 345 PKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL-MRTTYGLSPNVVHY 403
Query: 600 SALVDMYSKCGRIDYASRFFDLMPVRNVYS-WNSMISG 636
S +VD+ + G + A +P S W S+++
Sbjct: 404 SCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 175/351 (49%), Gaps = 22/351 (6%)
Query: 3 DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
+AK H +I++ DV L N LIN Y + G + A ++FD M +R+ VSW ++ YT
Sbjct: 79 EAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT 138
Query: 63 HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQ-ECGPSGFKFGMQVHCLVLKSNQTF 121
M +EA +F EM GF + + + SVL AC C K ++HCL +K+
Sbjct: 139 RNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECK---KLHCLSVKTCIDL 195
Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
+ V L+ +Y C D A ++FE ++ + ++W+S+++ Y Q + L+ R
Sbjct: 196 NLYVGTALLDLYAKCGMIKD-AVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRA 254
Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGF 241
Q R SL+ N++T S+I A S L+ +Q+ A++ K+G S+++V S+ V +
Sbjct: 255 Q----RMSLEQNQFTLSSVICAC--SNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMY 308
Query: 242 ARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLI------RSGLFDMVAVGN 295
A+ G+ + IF ++ +KN+ N ++ G K +I + G+ +
Sbjct: 309 AKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFS 368
Query: 296 GLVNMYAKCGTIDDSRSVFRFM-----IGKDSVSWNTMISGLDQNGCYEEA 341
L+++ G +++ R F+ M + + V ++ M+ L + G EA
Sbjct: 369 SLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 419
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/547 (40%), Positives = 327/547 (59%), Gaps = 4/547 (0%)
Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
+ D+ N +++ YA+ G L K+F M E D SW +++ + + V Y L
Sbjct: 148 NRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSL 207
Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
R PN T +AAA++ + G ++H +++ + ++ + ++L+ YGKCG
Sbjct: 208 MQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCG 267
Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
+D+ IF ++ E+ D VSW SMI Y + + +L ++ +R + +TFA VL
Sbjct: 268 CIDEARNIFDKIVEK-DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326
Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
+ACA + T E G +VH R + S+LVDMY+KCG I+ A D P ++
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLV 386
Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
SW S+I G A++G D+AL F + G PDHVTFV VLSAC+HAGLV++G + F S+
Sbjct: 387 SWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSI 446
Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT 748
++ + L + ++C+VDLL R+G ++++ I++MP+ P+ +W +VLG C +
Sbjct: 447 TEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGC--STYGNI 504
Query: 749 ELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
+L +AA LF++EP+N V YV +AN+YA+ GKWE+ K RK M+E V K G SW +
Sbjct: 505 DLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEI 564
Query: 809 KDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHS 868
K HVF+A D SHP + I E L+EL +KM++ GYVP T L D+E E KE+ + YHS
Sbjct: 565 KRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHS 624
Query: 869 EKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGK 927
EK+AVAF +L+ I++ KNLR C DCH A KFIS I R+I +RDS RFH F +G+
Sbjct: 625 EKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQ 684
Query: 928 CSCGDYW 934
CSCGDYW
Sbjct: 685 CSCGDYW 691
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 220/466 (47%), Gaps = 39/466 (8%)
Query: 261 NVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
N++ + +GK+VH ++ SG + + N L+ MYAKCG++ D+R VF M +
Sbjct: 90 NLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNR 149
Query: 321 DSVSWNTMISGLDQNGCY-------------------------------EEAIMNFCAMR 349
D SWN M++G + G EEA++ + M+
Sbjct: 150 DLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQ 209
Query: 350 RDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
R N F++ +++ A++ I G++IHG ++ GLDSD + ++L+ +Y G +
Sbjct: 210 RVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCI 269
Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
+F + E D VSW S+I + S E + ++ + PN TF +L A
Sbjct: 270 DEARNIFDKIVEKDVVSWTSMIDRYFKSSRW-REGFSLFSELVGSCERPNEYTFAGVLNA 328
Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
+ + +LG QVH + + + ++L+ Y KCG ++ + + + D VS
Sbjct: 329 CADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHV-VDGCPKPDLVS 387
Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGME-VHACG 587
W S+I G N +A+ +++ G + DH TF VLSAC +E+G+E ++
Sbjct: 388 WTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSIT 447
Query: 588 VRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMISGYARHGHGDKA 646
+ L + LVD+ ++ GR + MP++ + + W S++ G + +G+ D A
Sbjct: 448 EKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLA 507
Query: 647 LTLFSQM-KLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQV 691
++ K++ P VT+V + + + AG +E K K M ++
Sbjct: 508 EEAAQELFKIEPENP--VTYVTMANIYAAAGKWEEEGKMRKRMQEI 551
Score = 140 bits (352), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 194/423 (45%), Gaps = 60/423 (14%)
Query: 206 SSVLSGSYLLQQILAMVKKAGLL------------SDLYVGSALVSGFARLGNFYYARKI 253
S + G + ++L M K G L DL + +V+G+A +G ARK+
Sbjct: 114 SGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKL 173
Query: 254 FEQMIQKNVVSMNGLMEGR----------------------------------------- 272
F++M +K+ S ++ G
Sbjct: 174 FDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKC 233
Query: 273 -RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISG 331
R+GKE+HG+++R+GL + + L++MY KCG ID++R++F ++ KD VSW +MI
Sbjct: 234 IRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDR 293
Query: 332 LDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSD 391
++ + E F + + ++ L++CA L LG+Q+HG ++G D
Sbjct: 294 YFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPY 353
Query: 392 VSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR 451
S++L+ +Y G + V P+ D VSW S+IG A + EA+KY+ +
Sbjct: 354 SFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQN-GQPDEALKYFDLLL 412
Query: 452 RAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVI-KYNVANETTIENALLSCYGKCGEM 510
++G P+ VTF+N+L+A + + + G + + K+ +++ + L+ + G
Sbjct: 413 KSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRF 472
Query: 511 DDCEKIFARMSERRDEVSWNSMISG---YIHNELLPKAMNLVWFMMQRGQRLDHFTFATV 567
+ + + + M + + W S++ G Y + +L +A + F ++ + + T A +
Sbjct: 473 EQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQEL-FKIEPENPVTYVTMANI 531
Query: 568 LSA 570
+A
Sbjct: 532 YAA 534
Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 39/338 (11%)
Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
+ L+ EAV+ ++ P T+ N++ S + G +VH + I
Sbjct: 67 QKLLREAVQLLGRAKK----PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVI 122
Query: 497 ENALLSCYGKCGEMDDCEKIFARMSER------------------------------RDE 526
N LL Y KCG + D K+F M R +D
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDS 182
Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQR--GQRLDHFTFATVLSACASVATLERGMEVH 584
SW +M++GY+ + P+ +++ +MQR R + FT + ++A A+V + RG E+H
Sbjct: 183 YSWTAMVTGYVKKD-QPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIH 241
Query: 585 ACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGD 644
VRA L+ D V+ S+L+DMY KCG ID A FD + ++V SW SMI Y +
Sbjct: 242 GHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWR 301
Query: 645 KALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCM 704
+ +LFS++ P+ TF GVL+AC+ + G + M++V G P S +
Sbjct: 302 EGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSFASSSL 360
Query: 705 VDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCR 742
VD+ + G ++ + ++ P P+ + W +++G C +
Sbjct: 361 VDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQ 397
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 200/450 (44%), Gaps = 60/450 (13%)
Query: 2 KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
++ K H I GF + + N L+ +Y + G L A K+FDEMP+R+ SW +V+GY
Sbjct: 102 EEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGY 161
Query: 62 THKGMSNEACKMFKEMVR----------AGFLLNRYA-----LGSVLRACQECGPSGF-- 104
G+ EA K+F EM G++ L S+++ P+ F
Sbjct: 162 AEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTV 221
Query: 105 -------------KFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIE 151
+ G ++H ++++ D ++ + L+ MYG C D AR IF++I
Sbjct: 222 SIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC-GCIDEARNIFDKIV 280
Query: 152 TRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSG 211
+D++SW S+I Y + F LFS + R PNEYTF ++ A + L+
Sbjct: 281 EKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCER----PNEYTFAGVLNAC--ADLTT 334
Query: 212 SYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
L +Q+ + + G + S+LV + + GN A+ + + + ++VS L+ G
Sbjct: 335 EELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGG 394
Query: 272 ---RRKGKEVHGY---LIRSGL-FDMVAVGNGLVNMYAKC---GTIDDSRSVFRFMIGKD 321
+ E Y L++SG D V VN+ + C G ++ F + K
Sbjct: 395 CAQNGQPDEALKYFDLLLKSGTKPDHVT----FVNVLSACTHAGLVEKGLEFFYSITEKH 450
Query: 322 SVS-----WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
+S + ++ L ++G +E+ M + S F S L C++ G I L
Sbjct: 451 RLSHTSDHYTCLVDLLARSGRFEQLKSVISEM---PMKPSKFLWASVLGGCSTYGNIDLA 507
Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
++ E K+ ++ V+ + ++YA AG
Sbjct: 508 EEAAQELFKIEPENPVTYV-TMANIYAAAG 536
Score = 116 bits (290), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 186/442 (42%), Gaps = 83/442 (18%)
Query: 107 GMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYS 166
G +VH + S ++ N L+ MY C D AR++F+E+ RDL SWN +++ Y+
Sbjct: 104 GKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVD-ARKVFDEMPNRDLCSWNVMVNGYA 162
Query: 167 QRGDTISVFKLFSRMQRE----------GFRYSLKPNE----YTFGSLITAAYSSVLSGS 212
+ G KLF M + G+ +P E Y+ + + ++ + S
Sbjct: 163 EVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVS 222
Query: 213 YLL------------QQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQK 260
+ ++I + +AGL SD + S+L+ + + G AR IF+++++K
Sbjct: 223 IAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK 282
Query: 261 NVVSMNGLMEGRRK-----------------------------------------GKEVH 279
+VVS +++ K GK+VH
Sbjct: 283 DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVH 342
Query: 280 GYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYE 339
GY+ R G + LV+MY KCG I+ ++ V D VSW ++I G QNG +
Sbjct: 343 GYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPD 402
Query: 340 EAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH---GEGLKLGLDSDVSVSN 396
EA+ F + + G + + ++ LS+C G + G + E +L SD
Sbjct: 403 EALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYT-- 460
Query: 397 ALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGAFAD--SEALVSEAVKYYLDMRRA 453
L+ L A +G + V MP + + W SV+G + + L EA + +
Sbjct: 461 CLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE-- 518
Query: 454 GWSPNGVTFI---NILAAASSF 472
N VT++ NI AAA +
Sbjct: 519 --PENPVTYVTMANIYAAAGKW 538
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 113/251 (45%), Gaps = 20/251 (7%)
Query: 539 NELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVI 598
+LL +A+ L + R ++ T+ ++ C+ LE G +VH + +VI
Sbjct: 67 QKLLREAVQL----LGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVI 122
Query: 599 GSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGP 658
+ L+ MY+KCG + A + FD MP R++ SWN M++GYA G ++A LF +M
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK-- 180
Query: 659 LPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG-----RAGE 713
D ++ +++ +E + M +V P + S V R G+
Sbjct: 181 --DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGK 238
Query: 714 LDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLA 773
+I I + + + ++W +++ + C +A N+ ++ ++ V++ +
Sbjct: 239 --EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCID-----EARNIFDKIVEKDVVSWTSMI 291
Query: 774 NMYASGGKWED 784
+ Y +W +
Sbjct: 292 DRYFKSSRWRE 302
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 250/715 (34%), Positives = 394/715 (55%), Gaps = 19/715 (2%)
Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKN-----------VVSMNGLMEGRRKGKEV 278
+L+ + LV G+A+ G F A ++ +M+ V+ G + +GKEV
Sbjct: 159 NLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEV 218
Query: 279 HGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCY 338
H +++R G + V N L+ MY KCG + +R +F M +D +SWN MISG +NG
Sbjct: 219 HVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMC 278
Query: 339 EEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNAL 398
E + F AMR + +L S +S+C LG LG+ IH + G D+SV N+L
Sbjct: 279 HEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSL 338
Query: 399 LSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPN 458
+Y +AG K+F M D VSW ++I + + L +A+ Y M + P+
Sbjct: 339 TQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY-EYNFLPDKAIDTYRMMDQDSVKPD 397
Query: 459 GVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFA 518
+T +L+A ++ G ++H IK + + + N L++ Y KC +D IF
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH 457
Query: 519 RMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLE 578
+ R++ +SW S+I+G N +A+ + M+ + + T L+ACA + L
Sbjct: 458 NIP-RKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALM 515
Query: 579 RGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYA 638
G E+HA +R + D + +AL+DMY +CGR++ A F+ ++V SWN +++GY+
Sbjct: 516 CGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYS 574
Query: 639 RHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQL 698
G G + LF +M PD +TF+ +L CS + +V +G +F M YG+ P L
Sbjct: 575 ERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNL 633
Query: 699 EQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANML 758
+ ++C+VDLLGRAGEL + +FI KMP+TP+ +W +L A CR + K +LG +A +
Sbjct: 634 KHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA-CRIH-HKIDLGELSAQHI 691
Query: 759 FEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
FE++ ++ Y+LL N+YA GKW +VAK R+ MKE + +AGCSWV +K VH F++
Sbjct: 692 FELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSD 751
Query: 819 DESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLT 878
D+ HP+ I L+ +KM + G ++ + D S++++ HSE+ A+AF L
Sbjct: 752 DKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLI 811
Query: 879 RN-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGD 932
+PI + KNL +C +CH KFISK V REI +RD+ FHHF DG+CSCGD
Sbjct: 812 NTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 204 bits (519), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 199/369 (53%), Gaps = 9/369 (2%)
Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
V +GN + M+ + G + D+ VF M ++ SWN ++ G + G ++EA+ C R
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAM---CLYHR 185
Query: 351 ----DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAG 406
G+ ++ L +C + + G+++H ++ G + D+ V NAL+++Y G
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 407 YLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
+ +F MP D +SWN++I + ++ + E ++ + MR P+ +T +++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFEN-GMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
+A +LG +HA VI A + ++ N+L Y G + EK+F+RM ER+D
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM-ERKDI 363
Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
VSW +MISGY +N L KA++ M Q + D T A VLSACA++ L+ G+E+H
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423
Query: 587 GVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKA 646
++A L V++ + L++MYSKC ID A F +P +NV SW S+I+G + +A
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA 483
Query: 647 LTLFSQMKL 655
L QMK+
Sbjct: 484 LIFLRQMKM 492
Score = 190 bits (482), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 154/566 (27%), Positives = 262/566 (46%), Gaps = 57/566 (10%)
Query: 20 VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
V L N + ++VR G+L A +F +M +RN SW +V GY +G +EA ++ M+
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLW 188
Query: 80 AGFL-LNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
G + + Y VLR C G G +VH V++ D V N LI MY C +
Sbjct: 189 VGGVKPDVYTFPCVLRTCG--GIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGD 246
Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
AR +F+ + RD+ISWN++IS Y + G +LF M+ S+ P+ T
Sbjct: 247 -VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMR----GLSVDPDLMTLT 301
Query: 199 SLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
S+I+A +L L + I A V G D+ V ++L + G++ A K+F +M
Sbjct: 302 SVISAC--ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME 359
Query: 259 QKNVVSMNGLMEGRR-----------------------------------------KGKE 277
+K++VS ++ G G E
Sbjct: 360 RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE 419
Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD-QNG 336
+H I++ L V V N L+NMY+KC ID + +F + K+ +SW ++I+GL N
Sbjct: 420 LHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNR 479
Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
C+E I F + L + +L + L++CA +G +M G++IH L+ G+ D + N
Sbjct: 480 CFEALI--FLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN 537
Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
ALL +Y G ++ F + D SWN ++ +++ S V+ + M ++
Sbjct: 538 ALLDMYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSE-RGQGSMVVELFDRMVKSRVR 595
Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
P+ +TFI++L S M + G +++ Y V ++ G+ GE+ + K
Sbjct: 596 PDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKF 655
Query: 517 FARMSERRDEVSWNSMISG-YIHNEL 541
+M D W ++++ IH+++
Sbjct: 656 IQKMPVTPDPAVWGALLNACRIHHKI 681
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 196/436 (44%), Gaps = 4/436 (0%)
Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
+ GL NG EEA+ +M+ + ++ + C G +++ L
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
V + NA L+++ G L VF M E + SWN ++G +A Y+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
+ G P+ TF +L G +VH V++Y + + NAL++ Y KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
++ +F RM RRD +SWN+MISGY N + + + L + M D T +V+
Sbjct: 246 DVKSARLLFDRMP-RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
SAC + G ++HA + D+ + ++L MY G A + F M +++
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIV 364
Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
SW +MISGY + DKA+ + M D PD +T VLSAC+ G +D G + K +
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK-L 423
Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKT 748
+ LI + + ++++ + +DK + + +P N + W +++ A R N R
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSII-AGLRLNNRCF 481
Query: 749 ELGRKAANMLFEMEPQ 764
E M ++P
Sbjct: 482 EALIFLRQMKMTLQPN 497
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/473 (24%), Positives = 209/473 (44%), Gaps = 57/473 (12%)
Query: 4 AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
K H+ ++++G+ D+ + N LI +YV+ GD+ SA LFD MP R+ +SW ++SGY
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFE 274
Query: 64 KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
GM +E ++F M + L SV+ AC+ G + G +H V+ + D
Sbjct: 275 NGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDR--RLGRDIHAYVITTGFAVDI 332
Query: 124 LVSNVLIAMY---GSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
V N L MY GS E A ++F +E +D++SW ++IS Y +
Sbjct: 333 SVCNSLTQMYLNAGSWRE----AEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRM 388
Query: 181 MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
M ++ S+KP+E T ++++A + L ++ + KA L+S + V + L++
Sbjct: 389 MDQD----SVKPDEITVAAVLSAC--ATLGDLDTGVELHKLAIKARLISYVIVANNLINM 442
Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK-------------------------- 274
+++ A IF + +KNV+S ++ G R
Sbjct: 443 YSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLT 502
Query: 275 --------------GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGK 320
GKE+H +++R+G+ + N L++MY +CG ++ + S F K
Sbjct: 503 AALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KK 561
Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
D SWN +++G + G + F M + + + IS L C+ + G
Sbjct: 562 DVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYF 621
Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
+ G+ ++ ++ L AG L K MP D W +++ A
Sbjct: 622 SKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA 674
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 134/307 (43%), Gaps = 23/307 (7%)
Query: 20 VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
V + N LIN+Y + + A +F +P +N +SW I++G EA ++M +
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-K 491
Query: 80 AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
N L + L AC G G ++H VL++ D + N L+ MY C
Sbjct: 492 MTLQPNAITLTAALAACARIG--ALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRC-GR 548
Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
+ A F + +D+ SWN +++ YS+RG V +LF RM + R P+E TF S
Sbjct: 549 MNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVR----PDEITFIS 603
Query: 200 LITAAYSSVLSGSYLLQQILAMVKKA---GLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
L+ S S +++Q L K G+ +L + +V R G A K ++
Sbjct: 604 LLCGC-----SKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQK 658
Query: 257 M-IQKNVVSMNGLMEGRRKGKEVH-GYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDS 310
M + + L+ R ++ G L +F++ G L N+YA CG +
Sbjct: 659 MPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREV 718
Query: 311 RSVFRFM 317
V R M
Sbjct: 719 AKVRRMM 725
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 127/317 (40%), Gaps = 48/317 (15%)
Query: 533 ISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACL 592
+ G N L +AM L+ M + +D F ++ C E G +V++ + +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 593 EFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQ 652
V +G+A + M+ + G + A F M RN++SWN ++ GYA+ G+ D+A+ L+ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 653 MK-LDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRA 711
M + G PD TF VL C + G K YG ++ + ++ + +
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARG-KEVHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 712 GELDKIEEFINKMP----------------------------------ITPNSLIWRTVL 737
G++ ++MP + P+ + +V+
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 738 GACCRANCRKTELGRKAANMLFEMEPQNAVNYVL---LANMYASGGKWEDVAKARKAMKE 794
AC R+ LGR + + AV+ + L MY + G W + K M+
Sbjct: 305 SACELLGDRR--LGRDIH--AYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER 360
Query: 795 AEVKKEAGCSWVTMKDG 811
++ SW TM G
Sbjct: 361 KDI-----VSWTTMISG 372
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/668 (35%), Positives = 375/668 (56%), Gaps = 11/668 (1%)
Query: 273 RKGKEVHGYLI---RSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMI 329
R G+ +H +LI +S + N L+N+Y KC +R +F M ++ VSW M+
Sbjct: 48 RIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMM 107
Query: 330 SGLDQNGCYEEAIMNFCAMRRDGLMSSN-FSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
G +G E + F +M G N F SC++ G I G+Q HG LK GL
Sbjct: 108 KGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGL 167
Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
S V N L+ +Y+ ++V +P D ++S + + + A E +
Sbjct: 168 ISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAF-KEGLDVLR 226
Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
+ N +T+++ L S+ L QVH++++++ E AL++ YGKCG
Sbjct: 227 KTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCG 286
Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
++ +++F + ++ +++ Y ++ +A+NL M + + +TFA +L
Sbjct: 287 KVLYAQRVFDDTHAQNIFLN-TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILL 345
Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
++ A ++ L++G +H +++ V++G+ALV+MY+K G I+ A + F M R++
Sbjct: 346 NSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIV 405
Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSM 688
+WN+MISG + HG G +AL F +M G +P+ +TF+GVL ACSH G V++G +F +
Sbjct: 406 TWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQL 465
Query: 689 SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGAC-CRANCRK 747
+ + + P ++ ++C+V LL +AG E+F+ PI + + WRT+L AC R N R
Sbjct: 466 MKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYR- 524
Query: 748 TELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVT 807
LG+K A E P ++ YVLL+N++A +WE VAK R M VKKE G SW+
Sbjct: 525 --LGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIG 582
Query: 808 MKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYH 867
+++ HVF+A D HPE LIY K+KE+ K++ GY P A D++ E +ED +SYH
Sbjct: 583 IRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYH 642
Query: 868 SEKIAVAFVLTRN-SKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDG 926
SEK+AVA+ L + K P+ + KN+R+C DCHSA K ISKI R IV+RDSNRFHHF DG
Sbjct: 643 SEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDG 702
Query: 927 KCSCGDYW 934
+CSC DYW
Sbjct: 703 QCSCCDYW 710
Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 206/460 (44%), Gaps = 53/460 (11%)
Query: 17 AYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKE 76
A D + N+LIN+YV+ + A KLFD MP+RN VSW ++ GY + G E K+FK
Sbjct: 66 AEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKS 125
Query: 77 MVRAG-FLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGS 135
M +G N + V ++C G + G Q H LK V N L+ MY
Sbjct: 126 MFFSGESRPNEFVATVVFKSCSNSGR--IEEGKQFHGCFLKYGLISHEFVRNTLVYMYSL 183
Query: 136 CLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEY 195
C + + A R+ +++ DL ++S +S Y + G + + E F + N
Sbjct: 184 CSGNGE-AIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVW----NNL 238
Query: 196 TFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFE 255
T+ L + S L L Q+ + + + G +++ AL++ + + G YA+++F+
Sbjct: 239 TY--LSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFD 296
Query: 256 QMIQKNVVSMNGLMEGR-----------------------------------------RK 274
+N+ +M+ ++
Sbjct: 297 DTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQ 356
Query: 275 GKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQ 334
G +HG +++SG + V VGN LVNMYAK G+I+D+R F M +D V+WNTMISG
Sbjct: 357 GDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSH 416
Query: 335 NGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL-KLGLDSDVS 393
+G EA+ F M G + + + I L +C+ +G++ G + + K + D+
Sbjct: 417 HGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQ 476
Query: 394 VSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVIGA 432
++ L + AG P E D V+W +++ A
Sbjct: 477 HYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 156/352 (44%), Gaps = 22/352 (6%)
Query: 2 KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
++ K FH LK+G F+ NTL+ +Y A ++ D++P + ++ +SGY
Sbjct: 153 EEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212
Query: 62 THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
G E + ++ F+ N S LR +QVH +++
Sbjct: 213 LECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNL--RDLNLALQVHSRMVRFGFNA 270
Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
+ LI MYG C + A+R+F++ +++ +I+ Y Q LFS+M
Sbjct: 271 EVEACGALINMYGKCGKVL-YAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKM 329
Query: 182 QREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSG 240
+ + PNEYTF L+ + A S+L LL +V K+G + + VG+ALV+
Sbjct: 330 DTK----EVPPNEYTFAILLNSIAELSLLKQGDLLH---GLVLKSGYRNHVMVGNALVNM 382
Query: 241 FARLGNFYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGLFDMVAVG 294
+A+ G+ ARK F M +++V+ N ++ G R+ E +I +G
Sbjct: 383 YAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITF 442
Query: 295 NGLVNMYAKCGTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEA 341
G++ + G ++ F +F + D + ++ L + G +++A
Sbjct: 443 IGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDA 494
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 124/285 (43%), Gaps = 19/285 (6%)
Query: 8 HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
H ++++ GF +V C LIN+Y + G + A ++FD+ +N I+ Y
Sbjct: 260 HSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSF 319
Query: 68 NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
EA +F +M N Y +L + E S K G +H LVLKS +V N
Sbjct: 320 EEALNLFSKMDTKEVPPNEYTFAILLNSIAEL--SLLKQGDLLHGLVLKSGYRNHVMVGN 377
Query: 128 VLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFR 187
L+ MY S + AR+ F + RD+++WN++IS S G + F RM G
Sbjct: 378 ALVNMYAKS-GSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTG-- 434
Query: 188 YSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLG 245
PN TF ++ A V G + Q++ KK + D+ + +V ++ G
Sbjct: 435 --EIPNRITFIGVLQACSHIGFVEQGLHYFNQLM---KKFDVQPDIQHYTCIVGLLSKAG 489
Query: 246 NFYYARKIFEQM-IQKNVVSMNGLMEG------RRKGKEVHGYLI 283
F A I+ +VV+ L+ R GK+V Y I
Sbjct: 490 MFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAI 534
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 246/708 (34%), Positives = 386/708 (54%), Gaps = 63/708 (8%)
Query: 235 SALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVG 294
+++VSG+ G AR++F++M ++NVVS NGL+ G K + + + +F+++
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMI---VEARNVFELMPER 108
Query: 295 N-----GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMR 349
N +V Y + G + ++ S+F M ++ VSW M GL +G ++A + M
Sbjct: 109 NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMP 168
Query: 350 -RDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
+D + S+N + G + + I E + +V +++ Y +
Sbjct: 169 VKDVVASTNM-----IGGLCREGRVDEARLIFDEMR----ERNVVTWTTMITGYRQNNRV 219
Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
K+F +MPE +VSW S++ + S G + F ++
Sbjct: 220 DVARKLFEVMPEKTEVSWTSMLLGYTLS-----------------GRIEDAEEFFEVMPM 262
Query: 469 ASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVS 528
+ NA++ +G+ GE+ ++F M E RD +
Sbjct: 263 KPVIAC-----------------------NAMIVGFGEVGEISKARRVFDLM-EDRDNAT 298
Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGV 588
W MI Y +A++L M ++G R + ++LS CA++A+L+ G +VHA V
Sbjct: 299 WRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLV 358
Query: 589 RACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALT 648
R + DV + S L+ MY KCG + A FD +++ WNS+ISGYA HG G++AL
Sbjct: 359 RCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALK 418
Query: 649 LFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLL 708
+F +M G +P+ VT + +L+ACS+AG ++EG + F+SM + + P +E +SC VD+L
Sbjct: 419 IFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDML 478
Query: 709 GRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVN 768
GRAG++DK E I M I P++ +W +LGAC + +L AA LFE EP NA
Sbjct: 479 GRAGQVDKAMELIESMTIKPDATVWGALLGAC--KTHSRLDLAEVAAKKLFENEPDNAGT 536
Query: 769 YVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD-ESHPEKDL 827
YVLL+++ AS KW DVA RK M+ V K GCSW+ + VH+F G ++HPE+ +
Sbjct: 537 YVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAM 596
Query: 828 IYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSK-LPIR 886
I L++ + +R+AGY P L D++ E K D +S HSE++AVA+ L + + +PIR
Sbjct: 597 ILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIR 656
Query: 887 IMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
+MKNLRVCGDCH+A K ISK+ REI+LRD+NRFHHFN+G+CSC DYW
Sbjct: 657 VMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/546 (24%), Positives = 226/546 (41%), Gaps = 93/546 (17%)
Query: 23 CNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRAGF 82
C+ I+ R+G + A K FD + + SW IVSGY G+ EA ++F EM
Sbjct: 20 CSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERN- 78
Query: 83 LLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDC 142
V+ N G + N +I
Sbjct: 79 -------------------------------VVSWNGLVSGYIKNRMIVE---------- 97
Query: 143 ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM-QREGFRYSLKPNEYTFGSLI 201
AR +FE + R+++SW +++ Y Q G LF RM +R +++ FG LI
Sbjct: 98 ARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTV-----MFGGLI 152
Query: 202 TAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKN 261
Y + + D+ + ++ G R G AR IF++M ++N
Sbjct: 153 DDGRIDKARKLYDMMPV----------KDVVASTNMIGGLCREGRVDEARLIFDEMRERN 202
Query: 262 VVSMNGLMEGRRKGKEVH----------------------GYLIRSGLFDM--------- 290
VV+ ++ G R+ V GY + + D
Sbjct: 203 VVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPM 262
Query: 291 --VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAM 348
V N ++ + + G I +R VF M +D+ +W MI ++ G EA+ F M
Sbjct: 263 KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQM 322
Query: 349 RRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYL 408
++ G+ S SLIS LS CA+L + G+Q+H ++ D DV V++ L+++Y G L
Sbjct: 323 QKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGEL 382
Query: 409 SRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAA 468
+ VF D + WNS+I +A S L EA+K + +M +G PN VT I IL A
Sbjct: 383 VKAKLVFDRFSSKDIIMWNSIISGYA-SHGLGEEALKIFHEMPSSGTMPNKVTLIAILTA 441
Query: 469 ASSFSMGKLGHQV-HAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEV 527
S + G ++ + K+ V + + G+ G++D ++ M+ + D
Sbjct: 442 CSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDAT 501
Query: 528 SWNSMI 533
W +++
Sbjct: 502 VWGALL 507
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 123/253 (48%), Gaps = 10/253 (3%)
Query: 20 VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
V CN +I + VG+++ A ++FD M DR++ +W ++ Y KG EA +F +M +
Sbjct: 265 VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQK 324
Query: 80 AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
G + +L S+L C + ++G QVH +++ D V++VL+ MY C E
Sbjct: 325 QGVRPSFPSLISILSVCATL--ASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGEL 382
Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
A+ +F+ ++D+I WNSIIS Y+ G K+F M G PN+ T +
Sbjct: 383 VK-AKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSG----TMPNKVTLIA 437
Query: 200 LITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
++TA +Y+ L L+ +M K + + S V R G A ++ E M
Sbjct: 438 ILTACSYAGKLEEG--LEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMT 495
Query: 259 QKNVVSMNGLMEG 271
K ++ G + G
Sbjct: 496 IKPDATVWGALLG 508
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 126/272 (46%), Gaps = 26/272 (9%)
Query: 2 KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
K KL+ + +K DV +I R G + A +FDEM +RN V+W +++GY
Sbjct: 159 KARKLYDMMPVK-----DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGY 213
Query: 62 THKGMSNEACKMFKEMV-RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQT 120
+ A K+F+ M + LG L E F+ M + ++
Sbjct: 214 RQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEV-MPMKPVI------ 266
Query: 121 FDGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSR 180
N +I +G E + ARR+F+ +E RD +W +I Y ++G + LF++
Sbjct: 267 ----ACNAMIVGFGEVGEISK-ARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQ 321
Query: 181 MQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVS 239
MQ++G R S F SLI+ + + L+ +Q+ A + + D+YV S L++
Sbjct: 322 MQKQGVRPS-------FPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMT 374
Query: 240 GFARLGNFYYARKIFEQMIQKNVVSMNGLMEG 271
+ + G A+ +F++ K+++ N ++ G
Sbjct: 375 MYVKCGELVKAKLVFDRFSSKDIIMWNSIISG 406
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 53/93 (56%)
Query: 8 HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
H +++ F DV++ + L+ +YV+ G+L A +FD ++ + W I+SGY G+
Sbjct: 354 HAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLG 413
Query: 68 NEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
EA K+F EM +G + N+ L ++L AC G
Sbjct: 414 EEALKIFHEMPSSGTMPNKVTLIAILTACSYAG 446
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 97/230 (42%), Gaps = 45/230 (19%)
Query: 607 SKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFV 666
S+ G+I+ A +FFD + + + SWNS++SGY +G +A LF +M + V++
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER----NVVSWN 83
Query: 667 GVLSACSHAGLVDEGFKHFKSMSQ------------------------VYGLIPQLEQFS 702
G++S ++ E F+ M + ++ +P+ + S
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143
Query: 703 CMVDLLG--RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGR-KAANMLF 759
V G G +DK + + MP+ + + ++G CR GR A ++F
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMMPVK-DVVASTNMIGGLCRE-------GRVDEARLIF 195
Query: 760 -EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTM 808
EM +N V + + Y + V ARK + K E SW +M
Sbjct: 196 DEMRERNVVTWTTMITGYRQNNR---VDVARKLFEVMPEKTEV--SWTSM 240
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/609 (38%), Positives = 339/609 (55%), Gaps = 55/609 (9%)
Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCL----KVFFLMPEHDQVSWNSVIGAF 433
QIH +K G D + +L A + R L K+F MP+ + SWN++I F
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 434 ADSE---ALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
++S+ AL++ + Y + M PN TF ++L A + + G Q+H +KY
Sbjct: 101 SESDEDKALIAITLFYEM-MSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGF 159
Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFAR---------MSERRDE--------------- 526
+ + + L+ Y CG M D +F + M++RR
Sbjct: 160 GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYM 219
Query: 527 --------------------VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFAT 566
VSWN+MISGY N A+ + M + R ++ T +
Sbjct: 220 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVS 279
Query: 567 VLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRN 626
VL A + + +LE G +H + + D V+GSAL+DMYSKCG I+ A F+ +P N
Sbjct: 280 VLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPREN 339
Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
V +W++MI+G+A HG A+ F +M+ G P V ++ +L+ACSH GLV+EG ++F
Sbjct: 340 VITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFS 399
Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
M V GL P++E + CMVDLLGR+G LD+ EEFI MPI P+ +IW+ +LGAC
Sbjct: 400 QMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG-- 457
Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
E+G++ AN+L +M P ++ YV L+NMYAS G W +V++ R MKE +++K+ GCS +
Sbjct: 458 NVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLI 517
Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSY 866
+ +H FV D+SHP+ I L E++ K+R AGY P T L +LE E KE+++ Y
Sbjct: 518 DIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHY 577
Query: 867 HSEKIAVAFVLTRNSK-LPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFND 925
HSEKIA AF L S PIRI+KNLR+C DCHS+ K ISK+ R+I +RD RFHHF D
Sbjct: 578 HSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQD 637
Query: 926 GKCSCGDYW 934
G CSC DYW
Sbjct: 638 GSCSCMDYW 646
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 218/435 (50%), Gaps = 35/435 (8%)
Query: 109 QVHCLVLKSNQTFDGLVSNVLIAMYGSC---LESTDCARRIFEEIETRDLISWNSIISVY 165
Q+H + +KS Q D L + ++ + D A +IF ++ R+ SWN+II +
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 166 SQRGD--TISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAM 221
S+ + + LF M + F ++PN +TF S++ A + + G +QI +
Sbjct: 101 SESDEDKALIAITLFYEMMSDEF---VEPNRFTFPSVLKACAKTGKIQEG----KQIHGL 153
Query: 222 VKKAGLLSDLYVGSALVSGFARLGNFYYARKIF-EQMIQKNVVSMNGLMEGRRKGKEVHG 280
K G D +V S LV + G AR +F + +I+K++V +M RRK
Sbjct: 154 ALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMV----VMTDRRK------ 203
Query: 281 YLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEE 340
R G + + N +++ Y + G +R +F M + VSWNTMISG NG +++
Sbjct: 204 ---RDG---EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 341 AIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLS 400
A+ F M++ + + +L+S L + + LG + LG+ +H G+ D + +AL+
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 401 LYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGV 460
+Y+ G + + + VF +P + ++W+++I FA +A+ + MR+AG P+ V
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFA-IHGQAGDAIDCFCKMRQAGVRPSDV 376
Query: 461 TFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIEN--ALLSCYGKCGEMDDCEKIFA 518
+IN+L A S + + G + +Q++ + E IE+ ++ G+ G +D+ E+
Sbjct: 377 AYINLLTACSHGGLVEEGRRYFSQMVSVD-GLEPRIEHYGCMVDLLGRSGLLDEAEEFIL 435
Query: 519 RMSERRDEVSWNSMI 533
M + D+V W +++
Sbjct: 436 NMPIKPDDVIWKALL 450
Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 194/452 (42%), Gaps = 82/452 (18%)
Query: 35 DLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNE--ACKMFKEMVRAGFL-LNRYALGS 91
DL A K+F++MP RN SW I+ G++ A +F EM+ F+ NR+ S
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 92 VLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSC--------------- 136
VL+AC + G + G Q+H L LK D V + L+ MY C
Sbjct: 134 VLKACAKTGK--IQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNII 191
Query: 137 ---------------------------LESTDC--ARRIFEEIETRDLISWNSIISVYSQ 167
+ DC AR +F+++ R ++SWN++IS YS
Sbjct: 192 EKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSL 251
Query: 168 RG---DTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKK 224
G D + VF RE + ++PN T S++ A S L L + + +
Sbjct: 252 NGFFKDAVEVF-------REMKKGDIRPNYVTLVSVLPAI--SRLGSLELGEWLHLYAED 302
Query: 225 AGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG----RRKGKEVHG 280
+G+ D +GSAL+ +++ G A +FE++ ++NV++ + ++ G + G +
Sbjct: 303 SGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDC 362
Query: 281 Y--LIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS-----WNTMISGLD 333
+ + ++G+ L+ + G +++ R F M+ D + + M+ L
Sbjct: 363 FCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLG 422
Query: 334 QNGCYEEA---IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDS 390
++G +EA I+N D + + L +C G + +G+++ + + +
Sbjct: 423 RSGLLDEAEEFILNMPIKPDDVIWK------ALLGACRMQGNVEMGKRVANILMDM-VPH 475
Query: 391 DVSVSNALLSLYADAGYLSRCLKVFFLMPEHD 422
D AL ++YA G S ++ M E D
Sbjct: 476 DSGAYVALSNMYASQGNWSEVSEMRLRMKEKD 507
Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 151/333 (45%), Gaps = 19/333 (5%)
Query: 19 DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMV 78
++ L N +I+ Y+R+GD +A LFD+M R+ VSW ++SGY+ G +A ++F+EM
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 79 RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLE 138
+ N L SVL A G + G +H S D ++ + LI MY C
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLG--SLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKC-G 323
Query: 139 STDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
+ A +FE + ++I+W+++I+ ++ G F +M++ G R P++ +
Sbjct: 324 IIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR----PSDVAYI 379
Query: 199 SLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARK-IFE 255
+L+TA V G Q MV GL + +V R G A + I
Sbjct: 380 NLLTACSHGGLVEEGRRYFSQ---MVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILN 436
Query: 256 QMIQKNVVSMNGLMEG-RRKGKEVHGYLIRSGLFDMVAVGNG----LVNMYAKCGTIDDS 310
I+ + V L+ R +G G + + L DMV +G L NMYA G +
Sbjct: 437 MPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEV 496
Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIM 343
S R + + + + S +D +G E ++
Sbjct: 497 -SEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVV 528
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%)
Query: 7 FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
HL G D L + LI++Y + G + A +F+ +P N ++W+ +++G+ G
Sbjct: 296 LHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQ 355
Query: 67 SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
+ +A F +M +AG + A ++L AC G
Sbjct: 356 AGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGG 389
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/540 (39%), Positives = 336/540 (62%), Gaps = 10/540 (1%)
Query: 396 NALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGW 455
N L+++Y L+ ++F MP+ + +SW ++I A++ + + +A++ + M R
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCK-IHQKALELLVLMLRDNV 158
Query: 456 SPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEK 515
PN T+ ++L + + S ++ +H +IK + ++ + +AL+ + K GE +D
Sbjct: 159 RPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS 215
Query: 516 IFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVA 575
+F M D + WNS+I G+ N A+ L M + G + T +VL AC +A
Sbjct: 216 VFDEMVTG-DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 274
Query: 576 TLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMIS 635
LE GM+ H V+ + D+++ +ALVDMY KCG ++ A R F+ M R+V +W++MIS
Sbjct: 275 LLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS 332
Query: 636 GYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLI 695
G A++G+ +AL LF +MK G P+++T VGVL ACSHAGL+++G+ +F+SM ++YG+
Sbjct: 333 GLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGID 392
Query: 696 PQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAA 755
P E + CM+DLLG+AG+LD + +N+M P+++ WRT+LGA CR R L AA
Sbjct: 393 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA-CRVQ-RNMVLAEYAA 450
Query: 756 NMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVF 815
+ ++P++A Y LL+N+YA+ KW+ V + R M++ +KKE GCSW+ + +H F
Sbjct: 451 KKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAF 510
Query: 816 VAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAF 875
+ GD SHP+ + +KL +L ++ GYVP+T F L DLE E ED + +HSEK+A+AF
Sbjct: 511 IIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAF 570
Query: 876 -VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
++T + IRI KNLR+CGDCH K SK+ R IV+RD R+HHF DGKCSCGDYW
Sbjct: 571 GLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 219/453 (48%), Gaps = 46/453 (10%)
Query: 274 KGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLD 333
+G + +L +G M+ + N L+NMY K ++D+ +F M ++ +SW TMIS
Sbjct: 79 EGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYS 138
Query: 334 QNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVS 393
+ +++A+ M RD + + ++ S L SC + + + +H +K GL+SDV
Sbjct: 139 KCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVF 195
Query: 394 VSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRA 453
V +AL+ ++A G L VF M D + WNS+IG FA + + A++ + M+RA
Sbjct: 196 VRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN-SRSDVALELFKRMKRA 254
Query: 454 GWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDC 513
G+ T ++L A + ++ +LG Q H ++KY+ + + NAL+ Y KCG ++D
Sbjct: 255 GFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDA 312
Query: 514 EKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACAS 573
++F +M E RD ++W++MISG N +A+ L M G + ++ T VL AC+
Sbjct: 313 LRVFNQMKE-RDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSH 371
Query: 574 VATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSM 633
LE G Y + + + + + PVR Y M
Sbjct: 372 AGLLEDGW-----------------------YYFRSMK-----KLYGIDPVREHYG--CM 401
Query: 634 ISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-HAGLVDEGFKHFKSMSQVY 692
I + G D A+ L ++M+ + PD VT+ +L AC +V + + +V
Sbjct: 402 IDLLGKAGKLDDAVKLLNEMECE---PDAVTWRTLLGACRVQRNMVLAEY----AAKKVI 454
Query: 693 GLIPQ-LEQFSCMVDLLGRAGELDKIEEFINKM 724
L P+ ++ + ++ + + D +EE +M
Sbjct: 455 ALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRM 487
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 160/342 (46%), Gaps = 42/342 (12%)
Query: 231 LYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGK-------------- 276
+++ + L++ + + A ++F+QM Q+NV+S ++ K K
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 277 ------------------------EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRS 312
+H +I+ GL V V + L++++AK G +D+ S
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS 215
Query: 313 VFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGW 372
VF M+ D++ WN++I G QN + A+ F M+R G ++ +L S L +C L
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 373 IMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGA 432
+ LG Q H +K D D+ ++NAL+ +Y G L L+VF M E D ++W+++I
Sbjct: 276 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Query: 433 FADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVA 491
A + EA+K + M+ +G PN +T + +L A S + + G + K Y +
Sbjct: 334 LAQN-GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGID 392
Query: 492 NETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMI 533
++ GK G++DD K+ M D V+W +++
Sbjct: 393 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 10/212 (4%)
Query: 3 DAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYT 62
D ++ H I+K G DVF+ + LI+V+ ++G+ A +FDEM +++ W I+ G+
Sbjct: 177 DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 63 HKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
S+ A ++FK M RAGF+ + L SVLRAC G + + GMQ H ++K +Q D
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT--GLALLELGMQAHVHIVKYDQ--D 292
Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
+++N L+ MY C D A R+F +++ RD+I+W+++IS +Q G + KLF RM+
Sbjct: 293 LILNNALVDMYCKCGSLED-ALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMK 351
Query: 183 REGFRYSLKPNEYTF-GSLITAAYSSVLSGSY 213
G KPN T G L +++ +L +
Sbjct: 352 SSG----TKPNYITIVGVLFACSHAGLLEDGW 379
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 131/253 (51%), Gaps = 16/253 (6%)
Query: 20 VFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVR 79
+FL N LIN+YV+ L A +LFD+MP RN +SW ++S Y+ + +A ++ M+R
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 80 AGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLES 139
N Y SVLR+C +G +HC ++K D V + LI ++ E
Sbjct: 156 DNVRPNVYTYSSVLRSC-----NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEP 210
Query: 140 TDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGS 199
D A +F+E+ T D I WNSII ++Q + +LF RM+R GF + T S
Sbjct: 211 ED-ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGF----IAEQATLTS 265
Query: 200 LITAAYSSVLSGSYLLQQ-ILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMI 258
++ A +G LL+ + A V DL + +ALV + + G+ A ++F QM
Sbjct: 266 VLRAC-----TGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK 320
Query: 259 QKNVVSMNGLMEG 271
+++V++ + ++ G
Sbjct: 321 ERDVITWSTMISG 333
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 132/316 (41%), Gaps = 68/316 (21%)
Query: 542 LPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG----MEVHACGVRACLEFDVV 597
LP+AM + + G D T++ ++ C S + G ++ G R +
Sbjct: 42 LPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMM----F 97
Query: 598 IGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDG 657
+ + L++MY K ++ A + FD MP RNV SW +MIS Y++ KAL L M D
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 658 PLPDHVTFVGVLSACS--------HAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
P+ T+ VL +C+ H G++ EG + S V+ S ++D+
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLE-----SDVF-------VRSALIDVFA 205
Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRK---------------------- 747
+ GE + ++M +T ++++W +++G + N R
Sbjct: 206 KLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQ-NSRSDVALELFKRMKRAGFIAEQATL 263
Query: 748 TELGRKAANM-LFEMEPQNAVNYV----------LLANMYASGGKWEDVAKARKAMKEAE 796
T + R + L E+ Q V+ V L +MY G ED + MKE +
Sbjct: 264 TSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323
Query: 797 VKKEAGCSWVTMKDGV 812
V +W TM G+
Sbjct: 324 V-----ITWSTMISGL 334
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/609 (37%), Positives = 344/609 (56%), Gaps = 10/609 (1%)
Query: 329 ISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL 388
IS L NG +EA++ + G + L++C + GQ++H +K
Sbjct: 27 ISQLCSNGRLQEALLEMAML---GPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRY 83
Query: 389 DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYL 448
+ LL Y L KV MPE + VSW ++I ++ + SEA+ +
Sbjct: 84 LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT-GHSSEALTVFA 142
Query: 449 DMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCG 508
+M R+ PN TF +L + S LG Q+H ++K+N + + ++LL Y K G
Sbjct: 143 EMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAG 202
Query: 509 EMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVL 568
++ + +IF + ER D VS ++I+GY L +A+ + + G ++ T+A++L
Sbjct: 203 QIKEAREIFECLPER-DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLL 261
Query: 569 SACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVY 628
+A + +A L+ G + H +R L F V+ ++L+DMYSKCG + YA R FD MP R
Sbjct: 262 TALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAI 321
Query: 629 SWNSMISGYARHGHGDKALTLFSQMKLDGPL-PDHVTFVGVLSACSHAGLVDEGFKHFKS 687
SWN+M+ GY++HG G + L LF M+ + + PD VT + VLS CSH + D G F
Sbjct: 322 SWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDG 381
Query: 688 M-SQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCR 746
M + YG P E + C+VD+LGRAG +D+ EFI +MP P + + ++LGAC R +
Sbjct: 382 MVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGAC-RVHL- 439
Query: 747 KTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWV 806
++G L E+EP+NA NYV+L+N+YAS G+W DV R M + V KE G SW+
Sbjct: 440 SVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWI 499
Query: 807 TMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSY 866
+ +H F A D +HP ++ + K+KE++ KM+ AGYVP L+D++ E KE ++
Sbjct: 500 QHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLG 559
Query: 867 HSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFND 925
HSEK+A+ F ++ +PIR+ KNLR+C DCH+ K SK+ RE+ LRD NRFH D
Sbjct: 560 HSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVD 619
Query: 926 GKCSCGDYW 934
G CSCGDYW
Sbjct: 620 GICSCGDYW 628
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 183/368 (49%), Gaps = 11/368 (2%)
Query: 265 MNGLMEGR--RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDS 322
+N ++ R R G+ VH ++I++ + L+ Y KC ++D+R V M K+
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 323 VSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGE 382
VSW MIS Q G EA+ F M R + F+ + L+SC + LG+QIHG
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL 178
Query: 383 GLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSE 442
+K DS + V ++LL +YA AG + ++F +PE D VS ++I +A L E
Sbjct: 179 IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL-GLDEE 237
Query: 443 AVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLS 502
A++ + + G SPN VT+ ++L A S ++ G Q H V++ + ++N+L+
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 503 CYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMM-QRGQRLDH 561
Y KCG + ++F M E R +SWN+M+ GY + L + + L M ++ + D
Sbjct: 298 MYSKCGNLSYARRLFDNMPE-RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDA 356
Query: 562 FTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSA----LVDMYSKCGRIDYASR 617
T VLS C+ + G+ + V E+ G+ +VDM + GRID A
Sbjct: 357 VTLLAVLSGCSHGRMEDTGLNIFDGMVAG--EYGTKPGTEHYGCIVDMLGRAGRIDEAFE 414
Query: 618 FFDLMPVR 625
F MP +
Sbjct: 415 FIKRMPSK 422
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 148/283 (52%), Gaps = 18/283 (6%)
Query: 2 KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
+D + H ++K + +L L+ Y + L A K+ DEMP++N VSW ++S Y
Sbjct: 69 RDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRY 128
Query: 62 THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
+ G S+EA +F EM+R+ N + +VL +C SG G Q+H L++K N
Sbjct: 129 SQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRA--SGLGLGKQIHGLIVKWNYDS 186
Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
V + L+ MY + + AR IFE + RD++S +II+ Y+Q G ++F R+
Sbjct: 187 HIFVGSSLLDMYAKAGQIKE-AREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245
Query: 182 QREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLL---QQILAMVKKAGLLSDLYVGSALV 238
EG + PN T+ SL+TA LSG LL +Q V + L + ++L+
Sbjct: 246 HSEG----MSPNYVTYASLLTA-----LSGLALLDHGKQAHCHVLRRELPFYAVLQNSLI 296
Query: 239 SGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRK---GKEV 278
+++ GN YAR++F+ M ++ +S N ++ G K G+EV
Sbjct: 297 DMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREV 339
Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 6/200 (3%)
Query: 4 AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
K H I+K + +F+ ++L+++Y + G + A ++F+ +P+R+ VS I++GY
Sbjct: 172 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQ 231
Query: 64 KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDG 123
G+ EA +MF + G N S+L A G + G Q HC VL+ F
Sbjct: 232 LGLDEEALEMFHRLHSEGMSPNYVTYASLLTALS--GLALLDHGKQAHCHVLRRELPFYA 289
Query: 124 LVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQR 183
++ N LI MY C + ARR+F+ + R ISWN+++ YS+ G V +LF M+
Sbjct: 290 VLQNSLIDMYSKC-GNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRD 348
Query: 184 EGFRYSLKPNEYTFGSLITA 203
E +KP+ T ++++
Sbjct: 349 EK---RVKPDAVTLLAVLSG 365
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/611 (36%), Positives = 342/611 (55%), Gaps = 5/611 (0%)
Query: 325 WNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGL 384
+N++I+G N + E + F ++R+ GL F+ L +C LG +H +
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 385 KLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAV 444
K G + DV+ +LLS+Y+ +G L+ K+F +P+ V+W ++ + S EA+
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTS-GRHREAI 197
Query: 445 KYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCY 504
+ M G P+ + +L+A G + + + + + + L++ Y
Sbjct: 198 DLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLY 257
Query: 505 GKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTF 564
KCG+M+ +F M E+ D V+W++MI GY N + + L M+Q + D F+
Sbjct: 258 AKCGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSI 316
Query: 565 ATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPV 624
LS+CAS+ L+ G + R ++ + +AL+DMY+KCG + F M
Sbjct: 317 VGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKE 376
Query: 625 RNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKH 684
+++ N+ ISG A++GH + +F Q + G PD TF+G+L C HAGL+ +G +
Sbjct: 377 KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRF 436
Query: 685 FKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRAN 744
F ++S VY L +E + CMVDL GRAG LD I MP+ PN+++W +L C
Sbjct: 437 FNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLV- 495
Query: 745 CRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCS 804
+ T+L L +EP NA NYV L+N+Y+ GG+W++ A+ R M + +KK G S
Sbjct: 496 -KDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYS 554
Query: 805 WVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLV 864
W+ ++ VH F+A D+SHP D IY KL++L +MR G+VP T+F FD+E E KE ++
Sbjct: 555 WIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVL 614
Query: 865 SYHSEKIAVAF-VLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHF 923
YHSEK+AVA +++ + IR++KNLRVCGDCH K ISKI REIV+RD+NRFH F
Sbjct: 615 GYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCF 674
Query: 924 NDGKCSCGDYW 934
+G CSC DYW
Sbjct: 675 TNGSCSCNDYW 685
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 198/422 (46%), Gaps = 16/422 (3%)
Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLM-----------EGRRKGK 276
++++ ++L++GF F+ +F I+K+ + ++G R+ G
Sbjct: 73 FPNIFLYNSLINGFVNNHLFHETLDLFLS-IRKHGLYLHGFTFPLVLKACTRASSRKLGI 131
Query: 277 EVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNG 336
++H +++ G VA L+++Y+ G ++D+ +F + + V+W + SG +G
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSG 191
Query: 337 CYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSN 396
+ EAI F M G+ ++ ++ LS+C +G + G+ I ++ + + V
Sbjct: 192 RHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRT 251
Query: 397 ALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWS 456
L++LYA G + + VF M E D V+W+++I +A S + E ++ +L M +
Sbjct: 252 TLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYA-SNSFPKEGIELFLQMLQENLK 310
Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKI 516
P+ + + L++ +S LG + + ++ + NAL+ Y KCG M ++
Sbjct: 311 PDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEV 370
Query: 517 FARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVAT 576
F M E +D V N+ ISG N + + + + G D TF +L C
Sbjct: 371 FKEMKE-KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGL 429
Query: 577 LERGME-VHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR-NVYSWNSMI 634
++ G+ +A L+ V +VD++ + G +D A R MP+R N W +++
Sbjct: 430 IQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALL 489
Query: 635 SG 636
SG
Sbjct: 490 SG 491
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 176/370 (47%), Gaps = 56/370 (15%)
Query: 7 FHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGM 66
H ++K GF +DV +L+++Y G L A KLFDE+PDR+ V+W + SGYT G
Sbjct: 133 LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGR 192
Query: 67 SNEACKMFKEMVRAGFLLNRYALGSVLRACQECG--PSGFKFGMQVHCLVLKSNQTFDGL 124
EA +FK+MV G + Y + VL AC G SG + + ++ N
Sbjct: 193 HREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS----F 248
Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
V L+ +Y C + AR +F+ + +D+++W+++I Y+ +LF +M +E
Sbjct: 249 VRTTLVNLYAKC-GKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE 307
Query: 185 GFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARL 244
+LKP++++ +++ S L L + ++++ + L++L++ +AL+ +A+
Sbjct: 308 ----NLKPDQFSIVGFLSSCAS--LGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKC 361
Query: 245 GNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKE--------------------------- 277
G ++F++M +K++V MN + G K
Sbjct: 362 GAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLL 421
Query: 278 ---VHGYLIRSGL--FDMVAVGNGL----------VNMYAKCGTIDDS-RSVFRFMIGKD 321
VH LI+ GL F+ ++ L V+++ + G +DD+ R + + +
Sbjct: 422 CGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPN 481
Query: 322 SVSWNTMISG 331
++ W ++SG
Sbjct: 482 AIVWGALLSG 491
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/471 (22%), Positives = 202/471 (42%), Gaps = 56/471 (11%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
K H+ ++ H +D FL N L+ + + LF N + +++G+ +
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 65 GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
+ +E +F + + G L+ + VL+AC S K G+ +H LV+K D
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRA--SSRKLGIDLHSLVVKCGFNHDVA 147
Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
L+++Y D A ++F+EI R +++W ++ S Y+ G LF +M
Sbjct: 148 AMTSLLSIYSGSGRLND-AHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEM 206
Query: 185 GFRYSLKPNEYTFGSLITAA--YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
G +KP+ Y +++A + SG ++++ + M + + +V + LV+ +A
Sbjct: 207 G----VKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEM----EMQKNSFVRTTLVNLYA 258
Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEG------RRKGKEVHGYLIRSGL----FDMVA 292
+ G AR +F+ M++K++V+ + +++G ++G E+ +++ L F +V
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVG 318
Query: 293 -------------------------------VGNGLVNMYAKCGTIDDSRSVFRFMIGKD 321
+ N L++MYAKCG + VF+ M KD
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKD 378
Query: 322 SVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQ-IH 380
V N ISGL +NG + + F + G+ + + L C G I G + +
Sbjct: 379 IVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN 438
Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMP-EHDQVSWNSVI 430
L V ++ L+ AG L ++ MP + + W +++
Sbjct: 439 AISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALL 489
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 146/320 (45%), Gaps = 43/320 (13%)
Query: 21 FLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMSNEACKMFKEMVRA 80
F+ TL+N+Y + G + A +FD M +++ V+W+ ++ GY E ++F +M++
Sbjct: 248 FVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE 307
Query: 81 GFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLEST 140
+++++ L +C G G L+ + + ++N LI MY C
Sbjct: 308 NLKPDQFSIVGFLSSCASLG--ALDLGEWGISLIDRHEFLTNLFMANALIDMYAKC---G 362
Query: 141 DCAR--RIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFG 198
AR +F+E++ +D++ N+ IS ++ G F +F + ++ G + P+ TF
Sbjct: 363 AMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG----ISPDGSTFL 418
Query: 199 SLITAA-----------YSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNF 247
L+ + + +S Y L++ V+ G + DL+ + ++ RL
Sbjct: 419 GLLCGCVHAGLIQDGLRFFNAISCVYALKRT---VEHYGCMVDLWGRAGMLDDAYRL--- 472
Query: 248 YYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAV-----GN--GLVNM 300
I + ++ N + L+ G R K+ L + L +++A+ GN L N+
Sbjct: 473 -----ICDMPMRPNAIVWGALLSGCRLVKDTQ--LAETVLKELIALEPWNAGNYVQLSNI 525
Query: 301 YAKCGTIDDSRSVFRFMIGK 320
Y+ G D++ V R M+ K
Sbjct: 526 YSVGGRWDEAAEV-RDMMNK 544
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 107/280 (38%), Gaps = 44/280 (15%)
Query: 566 TVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVR 625
T++S +V L+ ++H + L D + + L+ + Y+ F
Sbjct: 18 TLISVACTVNHLK---QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFP 74
Query: 626 NVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-----------H 674
N++ +NS+I+G+ + + L LF ++ G TF VL AC+ H
Sbjct: 75 NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134
Query: 675 AGLVDEGFKH----FKSMSQVYGLIPQLEQFSCMVDLL------------------GRAG 712
+ +V GF H S+ +Y +L + D + GR
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHR 194
Query: 713 ELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQ-NAVNYVL 771
E + + + +M + P+S VL AC + G + EME Q N+
Sbjct: 195 EAIDLFKKMVEMGVKPDSYFIVQVLSACVHVG--DLDSGEWIVKYMEEMEMQKNSFVRTT 252
Query: 772 LANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDG 811
L N+YA GK E +M E ++ +W TM G
Sbjct: 253 LVNLYAKCGKMEKARSVFDSMVEKDI-----VTWSTMIQG 287
>sp|Q9C9H9|PP114_ARATH Pentatricopeptide repeat-containing protein At1g71420
OS=Arabidopsis thaliana GN=PCMP-H70 PE=2 SV=1
Length = 745
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 240/663 (36%), Positives = 379/663 (57%), Gaps = 32/663 (4%)
Query: 291 VAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRR 350
V + N L+NMYAKCG I +R VF M ++ VSW +I+G Q G +E F +M
Sbjct: 96 VILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML- 154
Query: 351 DGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYA---DAGY 407
+ F+L S L+SC G+Q+HG LKLGL + V+NA++S+Y D
Sbjct: 155 SHCFPNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAA 210
Query: 408 LSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILA 467
VF + + V+WNS+I AF L +A+ ++ M G + T +NI +
Sbjct: 211 AYEAWTVFEAIKFKNLVTWNSMIAAFQCCN-LGKKAIGVFMRMHSDGVGFDRATLLNICS 269
Query: 468 AASSFS------MGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE-MDDCEKIFARM 520
+ S + K Q+H+ +K + +T + AL+ Y + E DC K+F M
Sbjct: 270 SLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEM 329
Query: 521 SERRDEVSWNSMISGY-IHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLER 579
S RD V+WN +I+ + +++ +A++L + Q D +TF++VL ACA + T
Sbjct: 330 SHCRDIVAWNGIITAFAVYDP--ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARH 387
Query: 580 GMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
+ +HA ++ D V+ ++L+ Y+KCG +D R FD M R+V SWNSM+ Y+
Sbjct: 388 ALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSL 447
Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
HG D L +F +M ++ PD TF+ +LSACSHAG V+EG + F+SM + +PQL
Sbjct: 448 HGQVDSILPVFQKMDIN---PDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLN 504
Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
++C++D+L RA + EE I +MP+ P++++W +LG+C + T LG+ AA+ L
Sbjct: 505 HYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHG--NTRLGKLAADKLK 562
Query: 760 EM-EPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAG 818
E+ EP N+++Y+ ++N+Y + G + + + K M+ V+KE SW + + VH F +G
Sbjct: 563 ELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASG 622
Query: 819 DESHPEKDLIYEKLKELNQKMRDAGYVPQTKFALFDLEPESKEDL-VSYHSEKIAVAFVL 877
P+K+ +Y +LK L +++ GYVP+ + A D+E E +E+ + +HSEK+A+AF +
Sbjct: 623 GRHRPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAV 682
Query: 878 TRNSKLP------IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCG 931
K I+IMKN R+C DCH+ K SK++G+EI++RDSNRFHHF D CSC
Sbjct: 683 MEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCN 742
Query: 932 DYW 934
DYW
Sbjct: 743 DYW 745
Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 216/468 (46%), Gaps = 67/468 (14%)
Query: 230 DLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR----------------- 272
++ + + L++ +A+ GN YAR++F+ M ++NVVS L+ G
Sbjct: 95 NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML 154
Query: 273 -------------------RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC---GTIDDS 310
GK+VHG ++ GL + V N +++MY +C ++
Sbjct: 155 SHCFPNEFTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEA 214
Query: 311 RSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL 370
+VF + K+ V+WN+MI+ ++AI F M DG+ +L++ SS
Sbjct: 215 WTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKS 274
Query: 371 GWIMLGQ------QIHGEGLKLGLDSDVSVSNALLSLYADA-GYLSRCLKVFFLMPE-HD 422
++ + Q+H +K GL + V+ AL+ +Y++ + C K+F M D
Sbjct: 275 SDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRD 334
Query: 423 QVSWNSVIGAFA--DSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQ 480
V+WN +I AFA D E A+ + +R+ SP+ TF ++L A + +
Sbjct: 335 IVAWNGIITAFAVYDPE----RAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALS 390
Query: 481 VHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNE 540
+HAQVIK +T + N+L+ Y KCG +D C ++F M + RD VSWNSM+ Y
Sbjct: 391 IHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDM-DSRDVVSWNSMLKAY---S 446
Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIG- 599
L + +++ + D TF +LSAC+ +E G+ + R+ E +
Sbjct: 447 LHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRI----FRSMFEKPETLPQ 502
Query: 600 ----SALVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSMISGYARHGH 642
+ ++DM S+ R A MP+ + W +++ +HG+
Sbjct: 503 LNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGN 550
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 198/423 (46%), Gaps = 64/423 (15%)
Query: 7 FHLQILKHGFAY--DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
H +L H + Y +V L N LIN+Y + G++ A ++FD MP+RN VSW +++GY
Sbjct: 81 LHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQA 140
Query: 65 GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
G E +F M+ F N + L SVL +C+ ++ G QVH L LK
Sbjct: 141 GNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCR------YEPGKQVHGLALKLGLHCSIY 193
Query: 125 VSNVLIAMYGSCLESTDC--ARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
V+N +I+MYG C + A +FE I+ ++L++WNS+I+ + +F RM
Sbjct: 194 VANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMH 253
Query: 183 REGFRYSLKPNEYTFGSLITAAY-SSVLSGSYLLQ---QILAMVKKAGLLSDLYVGSALV 238
+G + + T ++ ++ Y SS L + + + Q+ ++ K+GL++ V +AL+
Sbjct: 254 SDGVGF----DRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALI 309
Query: 239 SGFAR-LGNFYYARKIFEQMIQ-KNVVSMNGLMEG------------------------- 271
++ L ++ K+F +M +++V+ NG++
Sbjct: 310 KVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPERAIHLFGQLRQEKLSPDW 369
Query: 272 ---------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
R +H +I+ G + N L++ YAKCG++D VF
Sbjct: 370 YTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDD 429
Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
M +D VSWN+M+ +G + + F M + + + I+ LS+C+ G + G
Sbjct: 430 MDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEG 486
Query: 377 QQI 379
+I
Sbjct: 487 LRI 489
Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 120/538 (22%), Positives = 225/538 (41%), Gaps = 65/538 (12%)
Query: 354 MSSNFSLISTLSSCASLGWIMLGQQIHGEGL--KLGLDSDVSVSNALLSLYADAGYLSRC 411
+ S + + +CA ++ G +H L +V ++N L+++YA G +
Sbjct: 56 LQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYA 115
Query: 412 LKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASS 471
+VF MPE + VSW ++I + + E + M + PN T ++L +
Sbjct: 116 RQVFDTMPERNVVSWTALITGYVQA-GNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCRY 173
Query: 472 FSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGE---MDDCEKIFARMSERRDEVS 528
+ G QVH +K + + NA++S YG+C + + +F + + ++ V+
Sbjct: 174 ----EPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAI-KFKNLVT 228
Query: 529 WNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERG------ME 582
WNSMI+ + L KA+ + M G D T + S+ + L ++
Sbjct: 229 WNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQ 288
Query: 583 VHACGVRACLEFDVVIGSALVDMYSKC--GRIDYASRFFDLMPVRNVYSWNSMISGYARH 640
+H+ V++ L + +AL+ +YS+ D F ++ R++ +WN +I+ +A +
Sbjct: 289 LHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY 348
Query: 641 GHGDKALTLFSQMKLDGPLPDHVTFVGVLSACS-----------HAGLVDEGFKH----F 685
++A+ LF Q++ + PD TF VL AC+ HA ++ GF
Sbjct: 349 D-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLN 407
Query: 686 KSMSQVYGLIPQLE---------------QFSCMVDLLGRAGELDKIEEFINKMPITPNS 730
S+ Y L+ ++ M+ G++D I KM I P+S
Sbjct: 408 NSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDS 467
Query: 731 LIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARK 790
+ +L AC A + E G + +FE +P+ A + + E A+A +
Sbjct: 468 ATFIALLSACSHAG--RVEEGLRIFRSMFE-KPETLPQLNHYACVIDMLSRAERFAEAEE 524
Query: 791 AMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEK---DLIYEKLKELNQKMRDAGYV 845
+K+ + +A W+ + + H L +KLKEL + Y+
Sbjct: 525 VIKQMPMDPDA-VVWIAL-------LGSCRKHGNTRLGKLAADKLKELVEPTNSMSYI 574
Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 25/315 (7%)
Query: 7 FHLQILKHGFAYDVFLCNTLINVYVR-VGDLASASKLFDEMPD-RNSVSWACIVSGYTHK 64
H +K G + LI VY + D KLF EM R+ V+W I++ +
Sbjct: 289 LHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY 348
Query: 65 GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
A +F ++ + + Y SVL+AC G + + +H V+K D +
Sbjct: 349 D-PERAIHLFGQLRQEKLSPDWYTFSSVLKACA--GLVTARHALSIHAQVIKGGFLADTV 405
Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
++N LI Y C S D R+F+++++RD++SWNS++ YS G S+ +F +M
Sbjct: 406 LNNSLIHAYAKC-GSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD-- 462
Query: 185 GFRYSLKPNEYTFGSLITAAYSS--VLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
+ P+ TF +L++A + V G L+ +M +K L L + ++ +
Sbjct: 463 -----INPDSATFIALLSACSHAGRVEEG---LRIFRSMFEKPETLPQLNHYACVIDMLS 514
Query: 243 RLGNFYYARKIFEQMIQKN--VVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNG---- 296
R F A ++ +QM VV + L R+ G G L L ++V N
Sbjct: 515 RAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYI 574
Query: 297 -LVNMYAKCGTIDDS 310
+ N+Y G+ +++
Sbjct: 575 QMSNIYNAEGSFNEA 589
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 1 SKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSG 60
++ A H Q++K GF D L N+LI+ Y + G L ++FD+M R+ VSW ++
Sbjct: 385 ARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKA 444
Query: 61 YTHKGMSNEACKMFKEM 77
Y+ G + +F++M
Sbjct: 445 YSLHGQVDSILPVFQKM 461
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/562 (38%), Positives = 335/562 (59%), Gaps = 8/562 (1%)
Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
QQ+H + G S+ L++L A ++ +F +P D +NSVI + +
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTI 496
L V YY M + SP+ TF +++ + + S ++G VH + +T +
Sbjct: 86 R-LPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYV 144
Query: 497 ENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQRG 556
+ AL++ Y KCG+M+ ++F RM E+ V+WNS++SG+ N L +A+ + + M + G
Sbjct: 145 QAALVTFYSKCGDMEGARQVFDRMPEK-SIVAWNSLVSGFEQNGLADEAIQVFYQMRESG 203
Query: 557 QRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSKCGRIDYAS 616
D TF ++LSACA + G VH + L+ +V +G+AL+++YS+CG + A
Sbjct: 204 FEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAR 263
Query: 617 RFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLD-GPLPDHVTFVGVLSACSHA 675
FD M NV +W +MIS Y HG+G +A+ LF++M+ D GP+P++VTFV VLSAC+HA
Sbjct: 264 EVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHA 323
Query: 676 GLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSL---I 732
GLV+EG +K M++ Y LIP +E CMVD+LGRAG LD+ +FI+++ T + +
Sbjct: 324 GLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPAL 383
Query: 733 WRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKARKAM 792
W +LGAC R +LG + A L +EP N ++V+L+N+YA GK ++V+ R M
Sbjct: 384 WTAMLGAC--KMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGM 441
Query: 793 KEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMRDAGYVPQTKFAL 852
++K+ G S + +++ ++F GDESH E IY L+ L + ++ GY P ++ +
Sbjct: 442 MRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVM 501
Query: 853 FDLEPESKEDLVSYHSEKIAVAFVLTRNSKLPIRIMKNLRVCGDCHSAFKFISKIVGREI 912
+E E KE + YHSEK+AVAF L + + I I+KNLR+C DCHSAFK+IS + R+I
Sbjct: 502 HQVEEEEKEFALRYHSEKLAVAFGLLKTVDVAITIVKNLRICEDCHSAFKYISIVSNRQI 561
Query: 913 VLRDSNRFHHFNDGKCSCGDYW 934
+RD RFHHF +G CSC DYW
Sbjct: 562 TVRDKLRFHHFQNGSCSCLDYW 583
Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 191/418 (45%), Gaps = 17/418 (4%)
Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
++ ++VH +LI +G ++ L+ + I + +F + D +N++I
Sbjct: 23 KQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKST 82
Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDV 392
+ + + M + SN++ S + SCA L + +G+ +H + G D
Sbjct: 83 SKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDT 142
Query: 393 SVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRR 452
V AL++ Y+ G + +VF MPE V+WNS++ F + L EA++ + MR
Sbjct: 143 YVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGF-EQNGLADEAIQVFYQMRE 201
Query: 453 AGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDD 512
+G+ P+ TF+++L+A + LG VH +I + + AL++ Y +CG++
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGK 261
Query: 513 CEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVWFMMQR-GQRLDHFTFATVLSAC 571
++F +M E + +W +MIS Y + +A+ L M G ++ TF VLSAC
Sbjct: 262 AREVFDKMKE-TNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
Query: 572 ASVATLERGMEVHACGVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPVRNV 627
A +E G V+ R + ++ G +VDM + G +D A +F +
Sbjct: 321 AHAGLVEEGRSVYK---RMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGK 377
Query: 628 YS----WNSMISGYARHGHGDKALTLFSQM-KLDGPLPDHVTFVGVLSACSHAGLVDE 680
+ W +M+ H + D + + ++ L+ P H + + A S G DE
Sbjct: 378 ATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALS--GKTDE 433
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 156/321 (48%), Gaps = 16/321 (4%)
Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMN----------GLMEGRRKGKE 277
L D ++ ++++ ++L + + +M+ NV N + R GK
Sbjct: 69 LPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKG 128
Query: 278 VHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGC 337
VH + + SG V LV Y+KCG ++ +R VF M K V+WN+++SG +QNG
Sbjct: 129 VHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGL 188
Query: 338 YEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNA 397
+EAI F MR G + + +S LS+CA G + LG +H + GLD +V + A
Sbjct: 189 ADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTA 248
Query: 398 LLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMR-RAGWS 456
L++LY+ G + + +VF M E + +W ++I A+ + +AV+ + M G
Sbjct: 249 LINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYG-THGYGQQAVELFNKMEDDCGPI 307
Query: 457 PNGVTFINILAAASSFSMGKLGHQVHAQVIK-YNVANETTIENALLSCYGKCGEMDDCEK 515
PN VTF+ +L+A + + + G V+ ++ K Y + ++ G+ G +D+ K
Sbjct: 308 PNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYK 367
Query: 516 IFARMSERRDEVS---WNSMI 533
++ + W +M+
Sbjct: 368 FIHQLDATGKATAPALWTAML 388
Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 103/199 (51%), Gaps = 6/199 (3%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
K H + GF D ++ L+ Y + GD+ A ++FD MP+++ V+W +VSG+
Sbjct: 127 KGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQN 186
Query: 65 GMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGL 124
G+++EA ++F +M +GF + S+L AC + G G VH ++ +
Sbjct: 187 GLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTG--AVSLGSWVHQYIISEGLDLNVK 244
Query: 125 VSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQRE 184
+ LI +Y C + AR +F++++ ++ +W ++IS Y G +LF++M+ +
Sbjct: 245 LGTALINLYSRCGDVGK-AREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDD 303
Query: 185 GFRYSLKPNEYTFGSLITA 203
PN TF ++++A
Sbjct: 304 C---GPIPNNVTFVAVLSA 319
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 146/334 (43%), Gaps = 53/334 (15%)
Query: 146 IFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAY 205
+F + D +NS+I S+ + + RM ++ P+ YTF S+I +
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRM----LSSNVSPSNYTFTSVIKSC- 117
Query: 206 SSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSM 265
+ LS + + + +G D YV +ALV+ +++ G+ AR++F++M +K++V+
Sbjct: 118 -ADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAW 176
Query: 266 NGLMEG-----------------RRKGKE------------------------VHGYLIR 284
N L+ G R G E VH Y+I
Sbjct: 177 NSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIIS 236
Query: 285 SGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMN 344
GL V +G L+N+Y++CG + +R VF M + +W MIS +G ++A+
Sbjct: 237 EGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVEL 296
Query: 345 FCAMRRD-GLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLK-LGLDSDVSVSNALLSLY 402
F M D G + +N + ++ LS+CA G + G+ ++ K L V ++ +
Sbjct: 297 FNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDML 356
Query: 403 ADAGYLSRCLKVFFLMPEHDQVS----WNSVIGA 432
AG+L K + + + W +++GA
Sbjct: 357 GRAGFLDEAYKFIHQLDATGKATAPALWTAMLGA 390
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/652 (35%), Positives = 356/652 (54%), Gaps = 42/652 (6%)
Query: 321 DSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIH 380
+S+ +N + L ++ I+ + +R G FS + L + + + + G ++H
Sbjct: 75 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 134
Query: 381 GEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALV 440
G K+ D V + +YA G ++ VF M D V+WN++I + LV
Sbjct: 135 GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRF-GLV 193
Query: 441 SEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNVANETT----- 495
EA K + +M+ + P+ + NI++A + ++ +I+ +V +T
Sbjct: 194 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTAL 253
Query: 496 --------------------------IENALLSCYGKCGEMDDCEKIFARMSERRDEVSW 529
+ A++S Y KCG +DD + IF + +E++D V W
Sbjct: 254 VTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQ-TEKKDLVCW 312
Query: 530 NSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVR 589
+MIS Y+ ++ +A+ + M G + D + +V+SACA++ L++ VH+C
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 590 ACLEFDVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTL 649
LE ++ I +AL++MY+KCG +D F+ MP RNV SW+SMI+ + HG AL+L
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSL 432
Query: 650 FSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLG 709
F++MK + P+ VTFVGVL CSH+GLV+EG K F SM+ Y + P+LE + CMVDL G
Sbjct: 433 FARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFG 492
Query: 710 RAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNY 769
RA L + E I MP+ N +IW +++ A CR + + ELG+ AA + E+EP +
Sbjct: 493 RANLLREALEVIESMPVASNVVIWGSLMSA-CRIH-GELELGKFAAKRILELEPDHDGAL 550
Query: 770 VLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIY 829
VL++N+YA +WEDV R+ M+E V KE G S + H F+ GD+ H + + IY
Sbjct: 551 VLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIY 610
Query: 830 EKLKELNQKMRDAGYVPQTKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKLP----- 884
KL E+ K++ AGYVP L D+E E K+DLV +HSEK+A+ F L K
Sbjct: 611 AKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSC 670
Query: 885 --IRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 934
IRI+KNLRVC DCH FK +SK+ REI++RD RFH + +G CSC DYW
Sbjct: 671 GVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 204/441 (46%), Gaps = 47/441 (10%)
Query: 258 IQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFM 317
I K V ++ L EG E+HG + V G ++MYA CG I+ +R+VF M
Sbjct: 117 ILKAVSKVSALFEG----MELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEM 172
Query: 318 IGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
+D V+WNTMI + G +EA F M+ +M L + +S+C G + +
Sbjct: 173 SHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNR 232
Query: 378 QIHGEGLKLGLDSDVSVSNALLSLYADAGYL-------------------------SRCL 412
I+ ++ + D + AL+++YA AG + S+C
Sbjct: 233 AIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCG 292
Query: 413 K------VFFLMPEHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINIL 466
+ +F + D V W ++I A+ +S+ EA++ + +M +G P+ V+ +++
Sbjct: 293 RLDDAQVIFDQTEKKDLVCWTTMISAYVESD-YPQEALRVFEEMCCSGIKPDVVSMFSVI 351
Query: 467 AAASSFSMGKLGHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDE 526
+A ++ + VH+ + + +E +I NAL++ Y KCG +D +F +M RR+
Sbjct: 352 SACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNV 410
Query: 527 VSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHAC 586
VSW+SMI+ + A++L M Q + TF VL C+ +E G ++ A
Sbjct: 411 VSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFAS 470
Query: 587 GVRACLEFDVVIG----SALVDMYSKCGRIDYASRFFDLMPV-RNVYSWNSMISGYARHG 641
E+++ +VD++ + + A + MPV NV W S++S A
Sbjct: 471 MTD---EYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMS--ACRI 525
Query: 642 HGDKALTLFSQMKLDGPLPDH 662
HG+ L F+ ++ PDH
Sbjct: 526 HGELELGKFAAKRILELEPDH 546
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 178/413 (43%), Gaps = 39/413 (9%)
Query: 359 SLISTLSSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLM 418
+++ LS C SL I +Q+H L+ ++ ++ LS+ + + LS L VF +
Sbjct: 14 TILEKLSFCKSLNHI---KQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSI 70
Query: 419 P-EHDQVSWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKL 477
P + + +N + + S + + +Y +R G + +F+ IL A S S
Sbjct: 71 PSPPESIVFNPFLRDLSRSSEPRA-TILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFE 129
Query: 478 GHQVHAQVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYI 537
G ++H K + +E + Y CG ++ +F MS RD V+WN+MI Y
Sbjct: 130 GMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMS-HRDVVTWNTMIERYC 188
Query: 538 HNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVV 597
L+ +A L M D ++SAC + ++ + + D
Sbjct: 189 RFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTH 248
Query: 598 IGSALVDM-------------------------------YSKCGRIDYASRFFDLMPVRN 626
+ +ALV M YSKCGR+D A FD ++
Sbjct: 249 LLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKD 308
Query: 627 VYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFK 686
+ W +MIS Y + +AL +F +M G PD V+ V+SAC++ G++D+ K
Sbjct: 309 LVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVH 367
Query: 687 SMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGA 739
S V GL +L + ++++ + G LD + KMP N + W +++ A
Sbjct: 368 SCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINA 419
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 187/423 (44%), Gaps = 73/423 (17%)
Query: 14 HGFAY------DVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
HG A+ D F+ +++Y G + A +FDEM R+ V+W ++ Y G+
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193
Query: 68 NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSN 127
+EA K+F+EM + + + L +++ AC G ++ ++ +++++ D +
Sbjct: 194 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTG--NMRYNRAIYEFLIENDVRMDTHLLT 251
Query: 128 VLIAMY--GSCLE----------------------------STDCARRIFEEIETRDLIS 157
L+ MY C++ D A+ IF++ E +DL+
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 311
Query: 158 WNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITA-AYSSVLSGSYLLQ 216
W ++IS Y + ++F M G +KP+ + S+I+A A +L + +
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSG----IKPDVVSMFSVISACANLGILDKA---K 364
Query: 217 QILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGK 276
+ + + GL S+L + +AL++ +A+ G R +FE+M ++NVVS + ++
Sbjct: 365 WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHG 424
Query: 277 EVHGYLIRSGLFDMVAVGN---------GLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNT 327
E L LF + N G++ + G +++ + +F M + +++
Sbjct: 425 EASDAL---SLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNIT--- 478
Query: 328 MISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASL---GWIMLGQQIHGEGL 384
L+ GC + R L+ +I ++ +++ G +M +IHGE L
Sbjct: 479 --PKLEHYGCMVDLF------GRANLLREALEVIESMPVASNVVIWGSLMSACRIHGE-L 529
Query: 385 KLG 387
+LG
Sbjct: 530 ELG 532
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 4 AKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTH 63
AK H I +G ++ + N LIN+Y + G L + +F++MP RN VSW+ +++ +
Sbjct: 363 AKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSM 422
Query: 64 KGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECG 100
G +++A +F M + N VL C G
Sbjct: 423 HGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSG 459
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 237/628 (37%), Positives = 359/628 (57%), Gaps = 34/628 (5%)
Query: 312 SVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLG 371
S FRF+ + +S ++ + LD N SLI+ + SC S
Sbjct: 10 SKFRFLYRRRFLSQSSFVHSLDANVS---------------------SLIAAVKSCVS-- 46
Query: 372 WIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIG 431
I L + +H + +K + + L+ Y G+ K+F MPE D VSWNS+I
Sbjct: 47 -IELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLIS 105
Query: 432 AFADSEAL-VSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYNV 490
++ L V + + G+ PN VTF+++++A + G +H V+K+ V
Sbjct: 106 GYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGV 165
Query: 491 ANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISGYIHNELLPKAMNLVW 550
E + NA ++ YGK G++ K+F +S ++ VSWN+MI ++ N L K L +
Sbjct: 166 LEEVKVVNAFINWYGKTGDLTSSCKLFEDLS-IKNLVSWNTMIVIHLQNGLAEKG--LAY 222
Query: 551 FMMQR--GQRLDHFTFATVLSACASVATLERGMEVHACGVRACLEFDVVIGSALVDMYSK 608
F M R G D TF VL +C + + +H + + I +AL+D+YSK
Sbjct: 223 FNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSK 282
Query: 609 CGRIDYASRFFDLMPVRNVYSWNSMISGYARHGHGDKALTLFSQMKLDGPLPDHVTFVGV 668
GR++ +S F + + +W +M++ YA HG G A+ F M G PDHVTF +
Sbjct: 283 LGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHL 342
Query: 669 LSACSHAGLVDEGFKHFKSMSQVYGLIPQLEQFSCMVDLLGRAGELDKIEEFINKMPITP 728
L+ACSH+GLV+EG +F++MS+ Y + P+L+ +SCMVDLLGR+G L I +MP+ P
Sbjct: 343 LNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEP 402
Query: 729 NSLIWRTVLGACCRANCRKTELGRKAANMLFEMEPQNAVNYVLLANMYASGGKWEDVAKA 788
+S +W +LGAC + T+LG KAA LFE+EP++ NYV+L+N+Y++ G W+D ++
Sbjct: 403 SSGVWGALLGAC--RVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRI 460
Query: 789 RKAMKEAEVKKEAGCSWVTMKDGVHVFVAGDESHPEKDLIYEKLKELNQKMR-DAGYVPQ 847
R MK+ + + +GCS++ + +H FV GD SHPE + I +KLKE+ +KM+ + GY +
Sbjct: 461 RNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSK 520
Query: 848 TKFALFDLEPESKEDLVSYHSEKIAVAFVLTRNSKL-PIRIMKNLRVCGDCHSAFKFISK 906
T+F L D+ + KE++++ HSEKIA+AF L S + PI I KNLR+CGDCH K IS
Sbjct: 521 TEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISL 580
Query: 907 IVGREIVLRDSNRFHHFNDGKCSCGDYW 934
I R I++RDS RFHHF DG CSC DYW
Sbjct: 581 IEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 193/450 (42%), Gaps = 57/450 (12%)
Query: 171 TISVFKLFSR---MQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGL 227
+ S F+ R + + F +SL N SLI A S V L + + V K+
Sbjct: 8 SCSKFRFLYRRRFLSQSSFVHSLDAN---VSSLIAAVKSCV--SIELCRLLHCKVVKSVS 62
Query: 228 LSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEG---------------- 271
++G LV + RLG+ A K+F++M ++++VS N L+ G
Sbjct: 63 YRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSR 122
Query: 272 ---------------------------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKC 304
+ +G+ +HG +++ G+ + V V N +N Y K
Sbjct: 123 MMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKT 182
Query: 305 GTIDDSRSVFRFMIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTL 364
G + S +F + K+ VSWNTMI QNG E+ + F RR G + ++ L
Sbjct: 183 GDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVL 242
Query: 365 SSCASLGWIMLGQQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQV 424
SC +G + L Q IHG + G + ++ ALL LY+ G L VF + D +
Sbjct: 243 RSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSM 302
Query: 425 SWNSVIGAFADSEALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHA 483
+W +++ A+A + +A+K++ M G SP+ VTF ++L A S + + G H
Sbjct: 303 AWTAMLAAYA-THGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFET 361
Query: 484 QVIKYNVANETTIENALLSCYGKCGEMDDCEKIFARMSERRDEVSWNSMISG---YIHNE 540
+Y + + ++ G+ G + D + M W +++ Y +
Sbjct: 362 MSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQ 421
Query: 541 LLPKAMNLVWFMMQRGQRLDHFTFATVLSA 570
L KA ++ + R R ++ + + SA
Sbjct: 422 LGTKAAERLFELEPRDGR-NYVMLSNIYSA 450
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 163/354 (46%), Gaps = 30/354 (8%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
+L H +++K F+ + L+ Y+R+G A KLFDEMP+R+ VSW ++SGY+ +
Sbjct: 51 RLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGR 110
Query: 65 GMSNEACKMFKEMV--RAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTFD 122
G + ++ M+ GF N S++ AC G + G +H LV+K +
Sbjct: 111 GYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSK--EEGRCIHGLVMKFGVLEE 168
Query: 123 GLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRMQ 182
V N I YG + T ++FE++ ++L+SWN++I ++ Q G F+ +
Sbjct: 169 VKVVNAFINWYGKTGDLTSSC-KLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSR 227
Query: 183 REGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFA 242
R G +P++ TF +++ + + L Q I ++ G + + +AL+ ++
Sbjct: 228 RVGH----EPDQATFLAVLRSCED--MGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYS 281
Query: 243 RLGNFYYARKIFEQMIQKNVVSMNGLMEGRRKGKEVHGY----------LIRSGLFDMVA 292
+LG + +F ++ + ++ ++ HG+ ++ G+
Sbjct: 282 KLGRLEDSSTVFHEITSPDSMAWTAML----AAYATHGFGRDAIKHFELMVHYGISPDHV 337
Query: 293 VGNGLVNMYAKCGTIDDSRSVF-----RFMIGKDSVSWNTMISGLDQNGCYEEA 341
L+N + G +++ + F R+ I ++ M+ L ++G ++A
Sbjct: 338 TFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 115/249 (46%), Gaps = 25/249 (10%)
Query: 2 KDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGY 61
++ + H ++K G +V + N IN Y + GDL S+ KLF+++ +N VSW ++ +
Sbjct: 151 EEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIH 210
Query: 62 THKGMSNEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF 121
G++ + F R G ++ +VLR+C++ G + +H L++ +
Sbjct: 211 LQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGV--VRLAQGIHGLIMFGGFSG 268
Query: 122 DGLVSNVLIAMYGSCLESTDCARRIFEEIETRDLISWNSIISVYSQRGDTISVFKLFSRM 181
+ ++ L+ +Y S L + + +F EI + D ++W ++++ Y+ G K F M
Sbjct: 269 NKCITTALLDLY-SKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELM 327
Query: 182 QREGFRYSLKPNEYTFGSLITAA-----------YSSVLSGSYLLQQ-------ILAMVK 223
Y + P+ TF L+ A Y +S Y + ++ ++
Sbjct: 328 ----VHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLG 383
Query: 224 KAGLLSDLY 232
++GLL D Y
Sbjct: 384 RSGLLQDAY 392
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/681 (33%), Positives = 375/681 (55%), Gaps = 70/681 (10%)
Query: 197 FGSLITAAYSSVLSGSYLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQ 256
F L+ + S LS Y+ + + A V K+G +++++ + L+ +++ G+ R++F++
Sbjct: 22 FAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDK 80
Query: 257 MIQKNVVSMNGLMEGRRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRF 316
M Q+N+ + N ++ G K G +D++ S+FR
Sbjct: 81 MPQRNIYTWNSVVTG-----------------------------LTKLGFLDEADSLFRS 111
Query: 317 MIGKDSVSWNTMISGLDQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLG 376
M +D +WN+M+SG Q+ EEA+ F M ++G + + +S S LS+C+ L + G
Sbjct: 112 MPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKG 171
Query: 377 QQIHGEGLKLGLDSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADS 436
Q+H K SDV + +AL+ +Y+ G ++ +VF M + + VSWNS+I F +
Sbjct: 172 VQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQN 231
Query: 437 EALVSEAVKYYLDMRRAGWSPNGVTFINILAAASSFSMGKLGHQVHAQVIKYN-VANETT 495
V EA+ + M + P+ VT ++++A +S S K+G +VH +V+K + + N+
Sbjct: 232 GPAV-EALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDII 290
Query: 496 IENALLSCYGKCGEMDDCEKIFARMSER------------------------------RD 525
+ NA + Y KC + + IF M R R+
Sbjct: 291 LSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERN 350
Query: 526 EVSWNSMISGYIHNELLPKAMNLVWFMMQRGQRLDHFTFATVLSACASVATLERGMEVHA 585
VSWN++I+GY N +A++L + + H++FA +L ACA +A L GM+ H
Sbjct: 351 VVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHV 410
Query: 586 CGVRACLEF------DVVIGSALVDMYSKCGRIDYASRFFDLMPVRNVYSWNSMISGYAR 639
++ +F D+ +G++L+DMY KCG ++ F M R+ SWN+MI G+A+
Sbjct: 411 HVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQ 470
Query: 640 HGHGDKALTLFSQMKLDGPLPDHVTFVGVLSACSHAGLVDEGFKHFKSMSQVYGLIPQLE 699
+G+G++AL LF +M G PDH+T +GVLSAC HAG V+EG +F SM++ +G+ P +
Sbjct: 471 NGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRD 530
Query: 700 QFSCMVDLLGRAGELDKIEEFINKMPITPNSLIWRTVLGACCRANCRKTELGRKAANMLF 759
++CMVDLLGRAG L++ + I +MP+ P+S+IW ++L AC R LG+ A L
Sbjct: 531 HYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAAC--KVHRNITLGKYVAEKLL 588
Query: 760 EMEPQNAVNYVLLANMYASGGKWEDVAKARKAMKEAEVKKEAGCSWVTMKDGVHVFVAGD 819
E+EP N+ YVLL+NMYA GKWEDV RK+M++ V K+ GCSW+ ++ HVF+ D
Sbjct: 589 EVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKD 648
Query: 820 ESHPEKDLIYEKLKELNQKMR 840
+SHP K I+ L L +MR
Sbjct: 649 KSHPRKKQIHSLLDILIAEMR 669
Score = 239 bits (610), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 159/570 (27%), Positives = 271/570 (47%), Gaps = 78/570 (13%)
Query: 5 KLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHK 64
+ H ++K GF+ ++F+ N LI+ Y + G L ++FD+MP RN +W +V+G T
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 65 GMSNEACKMFKEMV-------------------------------RAGFLLNRYALGSVL 93
G +EA +F+ M + GF+LN Y+ SVL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 94 RACQECGPSGFKFGMQVHCLVLKSNQTFDGLVSNVLIAMYGSCLESTDCARRIFEEIETR 153
AC G + G+QVH L+ KS D + + L+ MY C D A+R+F+E+ R
Sbjct: 160 SACS--GLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVND-AQRVFDEMGDR 216
Query: 154 DLISWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSY 213
+++SWNS+I+ + Q G + +F M ++P+E T S+I+A S LS
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVFQMM----LESRVEPDEVTLASVISACAS--LSAIK 270
Query: 214 LLQQILA-MVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMEGR 272
+ Q++ +VK L +D+ + +A V +A+ AR IF+ M +NV++ ++ G
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG- 329
Query: 273 RKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVSWNTMISGL 332
YA + +R +F M ++ VSWN +I+G
Sbjct: 330 ----------------------------YAMAASTKAARLMFTKMAERNVVSWNALIAGY 361
Query: 333 DQNGCYEEAIMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQQIHGEGLKLGL---- 388
QNG EEA+ FC ++R+ + +++S + L +CA L + LG Q H LK G
Sbjct: 362 TQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQS 421
Query: 389 --DSDVSVSNALLSLYADAGYLSRCLKVFFLMPEHDQVSWNSVIGAFADSEALVSEAVKY 446
+ D+ V N+L+ +Y G + VF M E D VSWN++I FA + +EA++
Sbjct: 422 GEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN-GYGNEALEL 480
Query: 447 YLDMRRAGWSPNGVTFINILAAASSFSMGKLG-HQVHAQVIKYNVANETTIENALLSCYG 505
+ +M +G P+ +T I +L+A + G H + + VA ++ G
Sbjct: 481 FREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLG 540
Query: 506 KCGEMDDCEKIFARMSERRDEVSWNSMISG 535
+ G +++ + + M + D V W S+++
Sbjct: 541 RAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 209/458 (45%), Gaps = 66/458 (14%)
Query: 8 HLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMPDRNSVSWACIVSGYTHKGMS 67
H I K F DV++ + L+++Y + G++ A ++FDEM DRN VSW +++ + G +
Sbjct: 175 HSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPA 234
Query: 68 NEACKMFKEMVRAGFLLNRYALGSVLRACQECGPSGFKFGMQVHCLVLKSNQTF-DGLVS 126
EA +F+ M+ + + L SV+ AC S K G +VH V+K+++ D ++S
Sbjct: 235 VEALDVFQMMLESRVEPDEVTLASVISACASL--SAIKVGQEVHGRVVKNDKLRNDIILS 292
Query: 127 NVLIAMYGSC------------------------------LESTDCARRIFEEIETRDLI 156
N + MY C ST AR +F ++ R+++
Sbjct: 293 NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVV 352
Query: 157 SWNSIISVYSQRGDTISVFKLFSRMQREGFRYSLKPNEYTFGSLITAAYSSVLSGSYLLQ 216
SWN++I+ Y+Q G+ LF ++RE S+ P Y+F +++ A L+ +L
Sbjct: 353 SWNALIAGYTQNGENEEALSLFCLLKRE----SVCPTHYSFANILKACAD--LAELHLGM 406
Query: 217 QILAMVKKAGLL------SDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLME 270
Q V K G D++VG++L+ + + G +F +M++++ VS N ++
Sbjct: 407 QAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMII 466
Query: 271 G------RRKGKEVHGYLIRSGLFDMVAVGNGLVNMYAKCGTIDDSRSVFRFMIGKDSVS 324
G + E+ ++ SG G+++ G +++ R F M V+
Sbjct: 467 GFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVA 526
Query: 325 -----WNTMISGLDQNGCYEEA--IMNFCAMRRDGLMSSNFSLISTLSSCASLGWIMLGQ 377
+ M+ L + G EEA ++ M+ D ++ S L++C I LG+
Sbjct: 527 PLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWG-----SLLAACKVHRNITLGK 581
Query: 378 QIHGEGLKLGLDSDVSVSNALLS-LYADAGYLSRCLKV 414
+ E L L ++ S LLS +YA+ G + V
Sbjct: 582 YV-AEKL-LEVEPSNSGPYVLLSNMYAELGKWEDVMNV 617
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 334,228,877
Number of Sequences: 539616
Number of extensions: 13591712
Number of successful extensions: 43685
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 31670
Number of HSP's gapped (non-prelim): 3192
length of query: 934
length of database: 191,569,459
effective HSP length: 127
effective length of query: 807
effective length of database: 123,038,227
effective search space: 99291849189
effective search space used: 99291849189
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)