Query 046195
Match_columns 730
No_of_seqs 268 out of 1138
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 09:38:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046195.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046195hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1162 Predicted small molecu 100.0 4E-137 8E-142 1147.5 52.6 614 1-728 1-616 (617)
2 PF03124 EXS: EXS family; Int 100.0 1.3E-79 2.8E-84 669.7 28.1 335 368-704 2-345 (345)
3 COG5409 EXS domain-containing 100.0 1.7E-64 3.7E-69 518.0 17.4 367 330-716 4-379 (384)
4 PF03105 SPX: SPX domain; Int 100.0 1.3E-31 2.9E-36 281.8 20.2 260 1-278 1-274 (275)
5 KOG1161 Protein involved in va 100.0 3.9E-31 8.5E-36 272.9 17.5 177 1-309 1-177 (310)
6 COG5036 SPX domain-containing 99.9 8.4E-24 1.8E-28 221.9 14.6 168 1-308 1-168 (509)
7 COG5408 SPX domain-containing 99.8 2E-18 4.4E-23 178.5 16.0 53 226-278 239-291 (296)
8 PF10112 Halogen_Hydrol: 5-bro 30.0 5.7E+02 0.012 25.5 12.0 71 232-306 115-186 (199)
9 PF15038 Jiraiya: Jiraiya 29.4 2.1E+02 0.0046 28.4 7.4 25 370-395 142-166 (175)
10 KOG4460 Nuclear pore complex, 29.3 9.9E+02 0.021 28.1 16.1 36 112-147 606-644 (741)
11 PF14193 DUF4315: Domain of un 27.3 1.8E+02 0.004 25.2 5.8 34 111-148 4-37 (83)
12 COG3872 Predicted metal-depend 27.0 4.3E+02 0.0094 27.9 9.3 75 388-491 171-245 (318)
13 PRK00068 hypothetical protein; 27.0 4.3E+02 0.0094 33.3 11.0 12 554-565 381-392 (970)
14 PF10777 YlaC: Inner membrane 23.1 3.7E+02 0.008 26.0 7.4 11 332-342 37-47 (155)
15 PF11120 DUF2636: Protein of u 22.6 1.4E+02 0.003 24.5 3.9 34 458-491 10-43 (62)
16 PF04568 IATP: Mitochondrial A 21.9 3.3E+02 0.0071 24.5 6.5 40 103-142 59-99 (100)
17 PF01544 CorA: CorA-like Mg2+ 21.0 2.9E+02 0.0064 28.7 7.4 23 238-260 157-179 (292)
18 PF10393 Matrilin_ccoil: Trime 20.1 3.4E+02 0.0073 21.0 5.3 33 106-142 14-46 (47)
No 1
>KOG1162 consensus Predicted small molecule transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.7e-137 Score=1147.47 Aligned_cols=614 Identities=53% Similarity=0.931 Sum_probs=545.5
Q ss_pred CCchhhhhhcCchhHHHhcCChhhHHHHHHHHHHHHHhhhccccccchhhhhhhccccccccCCCCCCCCCCcccchhhh
Q 046195 1 MKFKEEYESQMVPEWQEAYMNYDDLKTLLKNIQQIRQTRKQNAGVKRTMTLYRAFSGLVQRHNFPINPSRKESESQHIFV 80 (730)
Q Consensus 1 MKFgk~L~~~~vPEWr~~YidYk~LKk~Ik~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 80 (730)
|||||+|++|++|||+++|+||+.|||+||++.+...+. .
T Consensus 1 MKFgk~~~~q~~pEW~~ay~dY~~lK~~l~~i~~~~~~~--------------------------------~-------- 40 (617)
T KOG1162|consen 1 MKFGKELESQLVPEWRQAYIDYKYLKKLLKEIIENKPSS--------------------------------E-------- 40 (617)
T ss_pred CcchHHHHHhcCHHHHHHhhhHHHHHHHHHHHHhcCCCc--------------------------------C--------
Confidence 999999999999999999999999999999988632210 0
Q ss_pred cccCCCCCccccccCCCCCccchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q 046195 81 NSMNENGDRSYDATYLPLPEEGAECEKEYFRKLDEEFNKVEKFYKSKVEEVMDEAENLSKQMDALIAFRLKADILQGQSG 160 (730)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~Ff~~Ld~ELeKVn~Fy~~k~~El~~r~~~L~~ql~~l~~~r~~~~~~~~~~~ 160 (730)
+++.....+...+.|..||+.||+||+|||+||.+|++|+.+|.+.|++|++++++.|... +++
T Consensus 41 -----------~t~~~~~~~~~~~~~~~Ff~~ld~el~Kvn~Fy~~k~~e~~~~~~~L~~ql~~~~~~r~~~-----~~~ 104 (617)
T KOG1162|consen 41 -----------ETTFLMVSEEGGEFEEVFFRRLDEELNKVNKFYKEKVKEAREEAEELNKQLDALIALRVKS-----RSS 104 (617)
T ss_pred -----------ccHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-----ccc
Confidence 1111111133458899999999999999999999999999999999999999999876430 000
Q ss_pred CCCCCCchhhhhhhhccccCCCCcccccccccccccCCCcccchhhhhcccccchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 046195 161 ESDVSEPKFEERKLKTVNANKTVPLDIIGQVKVNQTFATPASMVRNVVYASRMTEEDYIKENVKKVEKQLNEAFAEFYLR 240 (730)
Q Consensus 161 ~~~~~~~~~~~~~~~s~~~~~~~~~dv~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~a~~e~y~~ 240 (730)
. + . +.-+.++ ...++++ +++++++|+.|+.|+|+.
T Consensus 105 ~------------------------~------~----~~~~~~~----------~~~f~~~-~~~~e~~lk~af~Efy~~ 139 (617)
T KOG1162|consen 105 V------------------------D------I----SDRAARL----------RGKFTKV-LRKAEEKLKLAFSEFYLK 139 (617)
T ss_pred c------------------------c------c----ccccchh----------hhhhhHH-HHHHHHHHHHHHHHHHHH
Confidence 0 0 0 0000000 1125555 788899999999999999
Q ss_pred HHHHhhHHHhHHHHHHHHHHhhhhccCCcccHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHhccCCHHHHhhhcCCCc
Q 046195 241 LRHLKSYSFLNILAFSKIMKKYDKITSTKASDSYMKMVDKSYLGSSNEVTKLMERVEATFIKHFANSNRRKGMDILRPKT 320 (730)
Q Consensus 241 l~~L~~f~~LN~tgf~KIlKK~DK~~~~~~~~~y~~~v~~~~f~~~~~l~~l~~~ve~ly~~~f~~g~~~~a~~~Lr~~~ 320 (730)
|.+||+|+.||.|||+||+|||||.++++. ..|++.|+.++|.+++++++|+.+||++|+++|++|||++||+.||++
T Consensus 140 L~llk~y~~lN~~~f~KI~KKyDK~~~~~~-~~~~~~v~~s~f~~~~~i~~l~~~Ve~~f~~~fan~nr~~~m~~lr~~- 217 (617)
T KOG1162|consen 140 LRLLKNYQFLNVTAFRKILKKYDKITSRDA-KRYVKMVDKSYFTSSDEITRLMLEVEETFTKHFANGNRRKAMKVLRPK- 217 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccch-HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhCCChhHhhhhcCCc-
Confidence 999999999999999999999999999999 889999999999999999999999999999999999999999999999
Q ss_pred ccccccchhhhhHHHHHHHHHHHHHHHHHHHhhhccccchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcce
Q 046195 321 KIERHRISFCIGLFVGCSIALVLGLILIIQARKLLDKKGQAQYMENMFPLYSFFAFVVLHMLMYAGNVYFWRLYRVNYPF 400 (730)
Q Consensus 321 ~~~~~~~~f~~G~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~l~~l~~~~~~~n~~~w~~~~INy~~ 400 (730)
+++.|+.+|.+|+++||++.+.++++.++++++++... +..|+..++|+|+ +++++++++++|+|+|+|+++||||++
T Consensus 218 ~~e~h~~~~~~~f~~g~~~~l~val~~~~~~~~~~~~~-~~~~~~~~~~l~~-~~~v~l~~fl~~~niy~W~~~rVNy~f 295 (617)
T KOG1162|consen 218 LKEKHRPTFSTGFFVGCGIGLSVALVALIYLRNILQSE-QRFYMETMFPLYG-FGLVVLHKFLYNVNIYEWSRTRVNYKF 295 (617)
T ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc-chhHHHHHHHHHH-HHHHHHHHHHhcCchHHHHHhcCCcee
Confidence 88999999999999999999999999988888888764 7889999999998 999999999999999999999999999
Q ss_pred eccccCCCcchhHHHHHHHHHHHHHHHHHHHHhhcccCCccchhhhhhhhhHHHHHHHHHHHHHhcchhhhhhhhhHHHH
Q 046195 401 IFGFKQGTELGYREVLLVSFGLATLALTSVISNLDMEMNPETEEYEALTELLPLGLVLLVTVIMICPFNIIYRSSRFFFL 480 (730)
Q Consensus 401 If~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Pl~~~~~~~~~l~~P~~i~~~~~R~~~l 480 (730)
|||+++++++++++++++++..++++.++++.++++..++.. ++++|+++++++++++++|++++|+++|+|++
T Consensus 296 If~~~~~~~l~~~~~l~i~~~~~~~~~l~~l~~l~~~~~~~~------~~~~Pl~ll~~~~~~L~~Pf~~fY~sSRf~ll 369 (617)
T KOG1162|consen 296 IFEFDQRTELGYRDILLIHNTNGILEFLPVLKNLDMSMSGQT------TELSPLILLLLFFFLLVCPFNTFYRSSRFWLL 369 (617)
T ss_pred eecCCccccccHHHHHHHHHHHHHHHHHHHHHHhccccCCCC------cccchHHHHHHHHheeeccchhhhHhhHHHHH
Confidence 999999999999999999999999999999999887765432 47899999999999999999999999999999
Q ss_pred HHhhhhhcCcceeeeccceehhhhhhhHHHhhhccceeeeeeecCCCCCCCCccCCCCchhhHHHHHHhhhHHHHHHHHH
Q 046195 481 VCLFRCIAAPFYKVTLQDFFLADQLTSQVQAFRSLEFYICYFGWGDFKHRENHCKSSSVYKFFYFVVAIIPYWSRFLQCF 560 (730)
Q Consensus 481 ~~l~r~~~~p~~~V~F~dfflaD~ltSl~~~l~D~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~lP~~~R~~QCl 560 (730)
+++.||+.+|+++|.|.|||+|||+||++.+++|+++++|+|++|++...+ +|..++.+..+.++++++|+|+|++||+
T Consensus 370 ~~l~rvi~spl~~V~~~DFfl~Dql~S~v~a~~~l~~~~C~y~~~~~~~~~-~~~~~~~~~~~~~iva~lP~~~RfLQCl 448 (617)
T KOG1162|consen 370 KRLFRVLSSPLYKVLFVDFFLADQLTSLVLALRDLEFFICYYGTGDFQARR-TCYCKDDYIEFQSIVAVLPYWFRFLQCL 448 (617)
T ss_pred HHHHHHHhccceeeccccccHHHHHHHHHHHHHhHHHhheeeccccccccc-ccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998776544 6666666777889999999999999999
Q ss_pred HHhhhcCCCchhhhHHHHHHHHHHHHHHhhhhccCCc-hhHHHHHHHHHHhhHHHHHHHHHhhccCcccCCCCccccccc
Q 046195 561 RRLVEERDPMQGYNGLKYFVAIIAISSRTAYSLYKGF-SWQITSWIFSIIATIYGTYWDLIMDWGLLQRQSKNPWLRDKL 639 (730)
Q Consensus 561 rry~dt~~~~hl~Na~KY~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ins~ys~~WDv~mDWgL~~~~~~~~~LR~~l 639 (730)
|||.|++..+||+||+||+++++++.+.++|+...+. .|+++|++++.+||+|+++||++|||||+.++++ ||||+++
T Consensus 449 RR~~d~~~~~hL~NAlKY~~~i~~v~~~~~y~~~~~~~~~~~l~~~~s~vaS~y~~~WDvv~DWgLl~~~~~-~~lRd~l 527 (617)
T KOG1162|consen 449 RRYRDEKAFPHLLNALKYSTTILAVMLTTLYRILPGSSLWFALWILSSKVASLYTTYWDVVMDWGLLNRKSK-PWLRDNL 527 (617)
T ss_pred HHHHhccchHhHHHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHheecccccccCc-hhhHHHh
Confidence 9999998899999999999999999999999998875 8999999999999999999999999999999988 9999999
Q ss_pred ccCCcchhhHHHHHHHHHHHHHHHHhhhc-cccccchhhHHHHHHHHHHHhhhhhhheeehhhhhhccCCceeccccCCC
Q 046195 640 LVPNKSVYFVAMVVNVLLRLAWLQTVLNI-RVSFIHKETLITIVASLEIIRRGIWNFFRLENEHLNNVGKFRAFKSVPLP 718 (730)
Q Consensus 640 ~~~~~~~Yy~ai~~n~ilRf~W~~~~~~~-~~~~~~~~~~~~~~~~lEi~RR~iWn~fRvEnEhi~N~~~fra~~~iplp 718 (730)
+||++++||+||+.|++||++|++.++.. ..... .+..+++++.+||+||++||||||||||+||||+|||+++||+|
T Consensus 528 ~~p~k~vYy~aiv~N~vLR~aW~~~~i~~~~~~~~-~~~~~~i~a~LEIiRRfiWnfFRLEnEhlnN~g~fRa~~~v~l~ 606 (617)
T KOG1162|consen 528 LYPQKWVYYSAIVLNFVLRFAWFFKTILVFHEEFL-SDSMVFIMALLEIIRRFIWNFFRLENEHLNNVGKFRAFRDVPLP 606 (617)
T ss_pred cccchheehhHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhccccccCCch
Confidence 99999999999999999999998765432 22222 67788999999999999999999999999999999999999999
Q ss_pred CccCcccccC
Q 046195 719 FTYHEAANDH 728 (730)
Q Consensus 719 ~~~~~~~~~~ 728 (730)
++.++++|-|
T Consensus 607 ~~~~~~~d~~ 616 (617)
T KOG1162|consen 607 FSYMDESDKV 616 (617)
T ss_pred hhhcccccCC
Confidence 8777666654
No 2
>PF03124 EXS: EXS family; InterPro: IPR004342 The EXS domain is named after ERD1/XPR1/SYG1 and proteins containing this motif include the C-terminal of the SYG1 G-protein associated signal transduction protein from Saccharomyces cerevisiae, and sequences that are thought to be Murine leukemia virus (MLV) receptors (XPR1. The N-terminal of these proteins often have an SPX domain (IPR004331 from INTERPRO) []. While the N-terminal is thought to be involved in signal transduction, the role of the C-terminal is not known. This region of similarity contains several predicted transmembrane helices. This family also includes the ERD1 (ERD: ER retention defective) S. cerevisiae proteins. ERD1 proteins are involved in the localization of endogenous endoplasmic reticulum (ER) proteins. Erd1 null mutants secrete such proteins even though they possess the C-terminal HDEL ER lumen localization label sequence. In addition, null mutants also exhibit defects in the Golgi-dependent processing of several glycoproteins, which led to the suggestion that the sorting of luminal ER proteins actually occurs in the Golgi, with subsequent return of these proteins to the ER via `salvage' vesicles [].; GO: 0016021 integral to membrane
Probab=100.00 E-value=1.3e-79 Score=669.73 Aligned_cols=335 Identities=41% Similarity=0.709 Sum_probs=296.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcceeccccCCCcchhHHHHHHHHHHHHHHHHHHHHhhcccC-Cccchhhh
Q 046195 368 FPLYSFFAFVVLHMLMYAGNVYFWRLYRVNYPFIFGFKQGTELGYREVLLVSFGLATLALTSVISNLDMEM-NPETEEYE 446 (730)
Q Consensus 368 ~p~~r~~~l~~l~~~~~~~n~~~w~~~~INy~~If~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~ 446 (730)
+|+||+.+++++++|+||+|+++|+++||||++|||+||++++++++++.+++++++++.++++.++.... +.......
T Consensus 2 ~~~~R~~~L~~l~~~l~~~nl~v~~~~~Iny~~If~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~l~~~~~~~~~~~~~ 81 (345)
T PF03124_consen 2 PPPFRGLLLLILGLWLWGINLYVWSRYRINYVFIFELDPRNSLSYRQLFELASFLTIIWLLCFLIYLASVSPSIISFANW 81 (345)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHhcCCcccCCcHHHHHhhhHHHHHHHHHHHHHHHHHHcCCcccccch
Confidence 67899999999999999999999999999999999999999999999999988877777666665543221 11111111
Q ss_pred hhhhhHHHHHHHHHHHHHhcchhhhhhhhhHHHHHHhhhhhcCcceeeeccceehhhhhhhHHHhhhccceeeeeeecCC
Q 046195 447 ALTELLPLGLVLLVTVIMICPFNIIYRSSRFFFLVCLFRCIAAPFYKVTLQDFFLADQLTSQVQAFRSLEFYICYFGWGD 526 (730)
Q Consensus 447 ~~~~~~Pl~~~~~~~~~l~~P~~i~~~~~R~~~l~~l~r~~~~p~~~V~F~dfflaD~ltSl~~~l~D~~~~~c~~~~~~ 526 (730)
...+++|+++++++++++++|++++++++|+|++++++|++.+|+.+|+|+|||+||||||++++++|+++++|+|..+.
T Consensus 82 ~~~~~~Pll~~~~~~~~l~~P~~~~~~~~R~~~~~~l~ril~~~~~~v~f~d~~laD~LtS~~~~l~D~~~~~c~~~~~~ 161 (345)
T PF03124_consen 82 YFVEYIPLLLLLILLLLLFFPFNIFYRSSRRWFLRTLKRILLAPFYPVRFRDFFLADQLTSLSKVLGDLEFTICYYFSGS 161 (345)
T ss_pred hhHHHhhHHHHHHHHHHhhcccchhhhhHHHHHHHHHHHHHhcccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHhccc
Confidence 22358999999999999999999999999999999999999999999999999999999999999999999999999866
Q ss_pred CCCCCCccCCCCchhhHHHHHHhhhHHHHHHHHHHHhhhcCCC-chhhhHHHHHHHHHHHHHHhhhhccCCch----hHH
Q 046195 527 FKHRENHCKSSSVYKFFYFVVAIIPYWSRFLQCFRRLVEERDP-MQGYNGLKYFVAIIAISSRTAYSLYKGFS----WQI 601 (730)
Q Consensus 527 ~~~~~~~c~~~~~~~~~~~~~~~lP~~~R~~QClrry~dt~~~-~hl~Na~KY~~~~~~~~~~~~~~~~~~~~----~~~ 601 (730)
..+.+++|++.+.+. .++++++|++||++||+|||+||++. +||+||+||++++++++++..++.+.+.. +..
T Consensus 162 ~~~~~~~c~~~~~~~--~~~~~~lP~~iR~~QClrry~~~~~~~~hL~Na~KY~~~~~v~~~~~~~~~~~~~~~~~~~~~ 239 (345)
T PF03124_consen 162 FTSPSNQCGSSSWYI--DPIVASLPYWIRFLQCLRRYRDTGDRFPHLFNALKYSSSIPVIILSALYRFYPSSDSSIWLFI 239 (345)
T ss_pred ccCCCCcCccccHhH--HhHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCccchhhHHH
Confidence 555678999876543 48999999999999999999999998 99999999999999999988877765543 678
Q ss_pred HHHHHHHHhhHHHHHHHHHhhccCcccC--CCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhhhcccc-ccchhhH
Q 046195 602 TSWIFSIIATIYGTYWDLIMDWGLLQRQ--SKNPWLRDKLLVPNKSVYFVAMVVNVLLRLAWLQTVLNIRVS-FIHKETL 678 (730)
Q Consensus 602 ~~~~~~~ins~ys~~WDv~mDWgL~~~~--~~~~~LR~~l~~~~~~~Yy~ai~~n~ilRf~W~~~~~~~~~~-~~~~~~~ 678 (730)
+|++++++||+||++|||+|||||++++ +++++||++++||+|++||+||+.|+++||+|++++++.... ..+.+.+
T Consensus 240 ~w~~~~~i~s~Ys~~WDv~~DWgL~~~~~~~~~~~LR~~l~~~~~~~Yy~ai~~n~ilRf~W~~~~~~~~~~~~~~~~~~ 319 (345)
T PF03124_consen 240 LWIIFALINSLYSFYWDVKMDWGLFQPKKKSKNWLLRRRLLYPRKWFYYFAIILNFILRFAWILTLSPPHFSHIDNSEIF 319 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccCCccccCCCCCccccccCCcchhhhHHHHHHHHHHHHHHHHHHhhcchhhhHHHH
Confidence 8889999999999999999999999988 789999999999999999999999999999999998875433 3467888
Q ss_pred HHHHHHHHHHhhhhhhheeehhhhhh
Q 046195 679 ITIVASLEIIRRGIWNFFRLENEHLN 704 (730)
Q Consensus 679 ~~~~~~lEi~RR~iWn~fRvEnEhi~ 704 (730)
.++++++||+||++||||||||||+|
T Consensus 320 ~~~~~~lEi~RR~iWnffRlE~Ehin 345 (345)
T PF03124_consen 320 IFILAILEIFRRFIWNFFRLENEHIN 345 (345)
T ss_pred HHHHHHHHHHHHHhhheeeeeHhhcC
Confidence 99999999999999999999999996
No 3
>COG5409 EXS domain-containing protein [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-64 Score=517.99 Aligned_cols=367 Identities=28% Similarity=0.415 Sum_probs=285.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhccccchhhh-hhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcceeccccCCC
Q 046195 330 CIGLFVGCSIALVLGLILIIQARKLLDKKGQAQY-MENMFPLYSFFAFVVLHMLMYAGNVYFWRLYRVNYPFIFGFKQGT 408 (730)
Q Consensus 330 ~~G~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~r~~~l~~l~~~~~~~n~~~w~~~~INy~~If~~~~~~ 408 (730)
++|+-.|.++++...+..+ ++..++..+ ..-++++|.++.+......++.+++|+|.+.+|||++||+++..+
T Consensus 4 vv~~~~g~~l~l~~~i~~l------~~~~~~~~~~~~ill~lw~~~~l~~~~~~lf~v~~~i~~r~~inyr~i~~~e~~~ 77 (384)
T COG5409 4 VVGLEKGVSLSLGLYIQNL------LNVGEPQSFIVLILLALWGGWILVFFLAFLFDVSCYILTRTPINYRFIFLFEQLS 77 (384)
T ss_pred eeeeeccccccHHHHHHHh------eeCCchHHHHHHHHHHHHhHHHHHHHHHHHhcCceeeEEeccccchhhhhHhHhh
Confidence 3567777776665444333 333333333 345678888888888888899999999999999999999987754
Q ss_pred c----chhHHHHHHHHHHHHHHHHHHHHhhccc-CCccchhhhhhhhhHHHHHHHHHHHHHhcchhhhhhhhhHHHHHHh
Q 046195 409 E----LGYREVLLVSFGLATLALTSVISNLDME-MNPETEEYEALTELLPLGLVLLVTVIMICPFNIIYRSSRFFFLVCL 483 (730)
Q Consensus 409 ~----l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~Pl~~~~~~~~~l~~P~~i~~~~~R~~~l~~l 483 (730)
. ...+.... .....++..+++.++... .... ......++|+++++++..++++|+++.++.+|+|++.++
T Consensus 78 ~~a~~~~~dfh~~--~i~~~~~~~slfiFl~~v~g~~~---~l~~~~~~P~l~v~~vf~~ll~Pf~ii~y~sRr~Li~sl 152 (384)
T COG5409 78 STARNFNLDFHRI--IIPFHFFTTSLFIFLNAVEGLKF---ILLFVYFLPLLQVGTVFWFLLKPFQIIYYWSRRYLIESL 152 (384)
T ss_pred hhhcccchhhHHH--hhhHHHHHHHHHHHHHHhhcccc---ceehhhhccHHHHHHHHHHhhcccceeeecchhhHHHHH
Confidence 3 33222221 111122222222222111 0000 112346789999999999999999999999999999999
Q ss_pred hhhhcCcceeeeccceehhhhhhhHHHhhhccceeeeeeecCCCCCCCCccCCCCchhhHHHHHHhhhHHHHHHHHHHHh
Q 046195 484 FRCIAAPFYKVTLQDFFLADQLTSQVQAFRSLEFYICYFGWGDFKHRENHCKSSSVYKFFYFVVAIIPYWSRFLQCFRRL 563 (730)
Q Consensus 484 ~r~~~~p~~~V~F~dfflaD~ltSl~~~l~D~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~lP~~~R~~QClrry 563 (730)
.|++.+|+.+|+|+||++||++||++++++|++.++|+|.... . ++ -|.+++.. +.++++++|.++|++||||||
T Consensus 153 iRv~l~~~~~v~f~dF~f~di~~SlTya~gdi~~FfCv~~~~~-~-~p-Lc~sshs~--~~g~~~~lP~ivR~lQCLRry 227 (384)
T COG5409 153 IRVFLFGYSLVRFTDFFFGDILISLTYALGDIYIFFCVYSLLF-R-EP-LCKSSHSD--LSGLAALLPVIVRFLQCLRRY 227 (384)
T ss_pred HHHHHhccceeeeeeeehhhHHHHHHHhhhhhhhHHHHHhhhc-c-cc-ccccCCcc--hHhHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999997421 1 12 58887764 467899999999999999999
Q ss_pred hhcCC-CchhhhHHHHHHHHHHHHHHhhhhccCC-chhHHHHHHHHHHhhHHHHHHHHHhhccCcccCCC-Ccccccccc
Q 046195 564 VEERD-PMQGYNGLKYFVAIIAISSRTAYSLYKG-FSWQITSWIFSIIATIYGTYWDLIMDWGLLQRQSK-NPWLRDKLL 640 (730)
Q Consensus 564 ~dt~~-~~hl~Na~KY~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ins~ys~~WDv~mDWgL~~~~~~-~~~LR~~l~ 640 (730)
.|+++ .+||.||+||++++++..+..+|+..++ ...+.++++++.+||+||+.|||.||||+..+.++ ++-.|+.++
T Consensus 228 ~ds~~~fphLlNALKYs~~i~v~~~~~~~r~~~~~~~l~~l~~~~a~lnS~yT~~WDV~mDW~l~~~~~~~~~~kr~~~~ 307 (384)
T COG5409 228 RDSLHEFPHLLNALKYSLNIPVLFCLWLYRVYEGEERLFHLQIWFALLNSIYTSFWDVFMDWSLDSLTSLRSWSKRAVTL 307 (384)
T ss_pred HhhhhhhHHHHHHHHHHHhhHHHHHHHHHHhccCcceeehHHHHHHHHHHHHHHhHHhheeeeecccccchhccccchhH
Confidence 99986 5999999999999999999999998774 44557778899999999999999999999877654 456777766
Q ss_pred cCCcchhhHHHHHHHHHHHHHHHHhhhccccccchhhHHHHHHHHHHHhhhhhhheeehhhhhhccCCceeccccC
Q 046195 641 VPNKSVYFVAMVVNVLLRLAWLQTVLNIRVSFIHKETLITIVASLEIIRRGIWNFFRLENEHLNNVGKFRAFKSVP 716 (730)
Q Consensus 641 ~~~~~~Yy~ai~~n~ilRf~W~~~~~~~~~~~~~~~~~~~~~~~lEi~RR~iWn~fRvEnEhi~N~~~fra~~~ip 716 (730)
++ |++||+.|+++|++|+++..+.+......+...++++++||+|||+|++||||+||.+|+..+|+.++.+
T Consensus 308 l~----y~~a~~inFllR~~Wi~~~~~~~~~~~~~~~~~F~m~~lEi~RR~vW~~FrveaE~~~n~~~~~~~~~~~ 379 (384)
T COG5409 308 LK----YHIAMIINFLLRFSWIVYYLPPNHIQHSADIFIFIMQLLEILRRFVWVFFRVEAEHSINFASFRAAGELK 379 (384)
T ss_pred HH----HHHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHhheeeEEEeehHHHhhHHHhhhcccCC
Confidence 54 8999999999999999987765432222333448999999999999999999999999999999999998
No 4
>PF03105 SPX: SPX domain; InterPro: IPR004331 The SPX domain is named after SYG1/Pho81/XPR1 proteins. This 180 residue length domain is found at the amino terminus of a variety of proteins. In the yeast protein SYG1, the N terminus directly binds to the G- protein beta subunit and inhibits transduction of the mating pheromone signal [] suggesting that all the members of this family are involved in G-protein associated signal transduction. The C-terminal of these proteins often have an EXS domain (IPR004342 from INTERPRO) []. The N-termini of several proteins involved in the regulation of phosphate transport, including the putative phosphate level sensors PHO81 from Saccharomyces cerevisiae and NUC-2 from Neurospora crassa, are also members of this family [, ]. NUC-2 contains several ankyrin repeats (IPR002110 from INTERPRO). Several members of this family are the XPR1 proteins: the xenotropic and polytropic retrovirus receptor confers susceptibility to infection with Murine leukemia virus (MLV) []. The similarity between SYG1, phosphate regulators and XPR1 sequences has been previously noted, as has the additional similarity to several predicted proteins, of unknown function, from Drosophila melanogaster, Arabidopsis thaliana, Caenorhabditis elegans, Schizosaccharomyces pombe, and Saccharomyces cerevisiae [, ]. In addition, given the similarities between XPR1 and SYG1 and phosphate regulatory proteins, it has been proposed that XPR1 might be involved in G-protein associated signal transduction [, , ] and may itself function as a phosphate sensor [].
Probab=99.98 E-value=1.3e-31 Score=281.78 Aligned_cols=260 Identities=29% Similarity=0.375 Sum_probs=142.7
Q ss_pred CCchhhhhhcCchhHHHhcCChhhHHHHHHHHHHHHHhhhcccc-ccc-hhhhhhhccccccccCCCCCCCCCCcccchh
Q 046195 1 MKFKEEYESQMVPEWQEAYMNYDDLKTLLKNIQQIRQTRKQNAG-VKR-TMTLYRAFSGLVQRHNFPINPSRKESESQHI 78 (730)
Q Consensus 1 MKFgk~L~~~~vPEWr~~YidYk~LKk~Ik~i~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 78 (730)
|||||+|+.++||||+++|||||.|||+||+++........... .+. ........++. +... .......
T Consensus 1 MKFgk~L~~~~vpEW~~~YidYk~LKk~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~~~~ 71 (275)
T PF03105_consen 1 MKFGKQLQENAVPEWRDKYIDYKQLKKLIKRIQNEKESLGLSAETLSSISISSSSSSSSR------SSSN---SFESTSP 71 (275)
T ss_pred CCchHHHHHhcCHHHHHHhCCHHHHHHHHHHHHhhhhcccccccccchhhhhhhhhcccc------cccc---ccccccc
Confidence 99999999999999999999999999999999886554321100 000 00000000000 0000 0000000
Q ss_pred hhcccCCCCCccccccCCCCCccchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 046195 79 FVNSMNENGDRSYDATYLPLPEEGAECEKEYFRKLDEEFNKVEKFYKSKVEEVMDEAENLSKQMDALIAFRLKADILQGQ 158 (730)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~Ff~~Ld~ELeKVn~Fy~~k~~El~~r~~~L~~ql~~l~~~r~~~~~~~~~ 158 (730)
.... ..+... ......+....+.+||..|+.||+||++||.++++|+.++++.|+.|+..+...+.........
T Consensus 72 ~~~~-~~~~~~-----~~~~~~~~~~~~~~F~~~L~~El~KVn~Fy~~k~~el~~~~~~L~~ql~~l~~~~~~~~~~~~~ 145 (275)
T PF03105_consen 72 SSSN-TSPSSS-----NSEQNEDNEESEEEFFELLDEELEKVNDFYKEKEKELRERLEELQKQLEELREQRSKSSDKYNW 145 (275)
T ss_pred cccc-cccccc-----ccchhhhhhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccc
Confidence 0000 000000 0001123446899999999999999999999999999999999999999998765432111000
Q ss_pred -CCCCC-----CCCchhhhhhhhccc---c-CCCCcccccccccccccCCCcccc--hhhhhcccccchhhhhHHHHHHH
Q 046195 159 -SGESD-----VSEPKFEERKLKTVN---A-NKTVPLDIIGQVKVNQTFATPASM--VRNVVYASRMTEEDYIKENVKKV 226 (730)
Q Consensus 159 -~~~~~-----~~~~~~~~~~~~s~~---~-~~~~~~dv~~~~~~~~~~~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~ 226 (730)
..... ...+..+.....+.. + ......+...... ..+..+... ..+......+... .....+..+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 222 (275)
T PF03105_consen 146 NQSSQLSSSSNIFSSSSSASAGSSNSSSASRRSQRFSSESSKQS--SNSESDAESDNNRGDRSSDKPFLS-SSQKSLKKA 222 (275)
T ss_pred ccchhhccccccccCccccccCCccccccccccccchhhhhhcc--CCCCcccccccccccccccccccc-cchhhHHHH
Confidence 00000 000000000000000 0 0000000000000 000000000 0000000000111 233455667
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHhHHHHHHHHHHhhhhccCCcccHHHHHHh
Q 046195 227 EKQLNEAFAEFYLRLRHLKSYSFLNILAFSKIMKKYDKITSTKASDSYMKMV 278 (730)
Q Consensus 227 ~~~L~~a~~e~y~~l~~L~~f~~LN~tgf~KIlKK~DK~~~~~~~~~y~~~v 278 (730)
...|++++.++|++|.+|++|++||+|||+||||||||+++++.++.||+.|
T Consensus 223 ~~~l~~~~~e~y~~l~~Lk~f~~LN~taf~KIlKK~DK~~~~~~~~~y~~~v 274 (275)
T PF03105_consen 223 RKQLKKAFIELYRELELLKSFVELNRTAFRKILKKYDKVTGTSLSDDYMEEV 274 (275)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHhhhhcc
Confidence 7899999999999999999999999999999999999999999999999864
No 5
>KOG1161 consensus Protein involved in vacuolar polyphosphate accumulation, contains SPX domain [Inorganic ion transport and metabolism]
Probab=99.97 E-value=3.9e-31 Score=272.86 Aligned_cols=177 Identities=26% Similarity=0.409 Sum_probs=148.7
Q ss_pred CCchhhhhhcCchhHHHhcCChhhHHHHHHHHHHHHHhhhccccccchhhhhhhccccccccCCCCCCCCCCcccchhhh
Q 046195 1 MKFKEEYESQMVPEWQEAYMNYDDLKTLLKNIQQIRQTRKQNAGVKRTMTLYRAFSGLVQRHNFPINPSRKESESQHIFV 80 (730)
Q Consensus 1 MKFgk~L~~~~vPEWr~~YidYk~LKk~Ik~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 80 (730)
|||||+|++..+|||+++|||||.|||.||+..... . +
T Consensus 1 MkFGk~L~~~~l~ew~~~yinYk~LKK~lK~~~~~~------------------------------~----~-------- 38 (310)
T KOG1161|consen 1 MKFGKYLKEELLPEWKDKYINYKELKKLLKQYSIQT------------------------------A----D-------- 38 (310)
T ss_pred CchhHHHHHhhhhhHhhhhcCHHHHHHHHHHhcccc------------------------------c----c--------
Confidence 999999999999999999999999999999854210 0 0
Q ss_pred cccCCCCCccccccCCCCCccchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q 046195 81 NSMNENGDRSYDATYLPLPEEGAECEKEYFRKLDEEFNKVEKFYKSKVEEVMDEAENLSKQMDALIAFRLKADILQGQSG 160 (730)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~Ff~~Ld~ELeKVn~Fy~~k~~El~~r~~~L~~ql~~l~~~r~~~~~~~~~~~ 160 (730)
+. .....|..|++.||+|||||+.|+.+|++|+..|+++|++|.++ .. .
T Consensus 39 ------~~------------~~~~~e~dFv~~Ld~ELEKv~~F~lek~~el~~Rl~~L~e~~~~--~~-----------~ 87 (310)
T KOG1161|consen 39 ------SS------------PDSRDESDFVRLLDAELEKVNGFQLEKESELIIRLKELEEKIDA--LS-----------L 87 (310)
T ss_pred ------CC------------cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--cc-----------c
Confidence 00 00126899999999999999999999999999999999988753 00 0
Q ss_pred CCCCCCchhhhhhhhccccCCCCcccccccccccccCCCcccchhhhhcccccchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 046195 161 ESDVSEPKFEERKLKTVNANKTVPLDIIGQVKVNQTFATPASMVRNVVYASRMTEEDYIKENVKKVEKQLNEAFAEFYLR 240 (730)
Q Consensus 161 ~~~~~~~~~~~~~~~s~~~~~~~~~dv~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~a~~e~y~~ 240 (730)
.| ++ .++ + ..|++++.++..+
T Consensus 88 --------------------------------------~~------------~~-----~~~---~-~~lr~~l~~~~~e 108 (310)
T KOG1161|consen 88 --------------------------------------EP------------PS-----AEE---M-KELREELVDFHGE 108 (310)
T ss_pred --------------------------------------CC------------cc-----hhH---H-HHHHHHHHHHHHH
Confidence 00 00 011 1 4788999999999
Q ss_pred HHHHhhHHHhHHHHHHHHHHhhhhccCCcccHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHhccCCH
Q 046195 241 LRHLKSYSFLNILAFSKIMKKYDKITSTKASDSYMKMVDKSYLGSSNEVTKLMERVEATFIKHFANSNR 309 (730)
Q Consensus 241 l~~L~~f~~LN~tgf~KIlKK~DK~~~~~~~~~y~~~v~~~~f~~~~~l~~l~~~ve~ly~~~f~~g~~ 309 (730)
+.+|.+|++||+|||+||||||||++|......|..+|..+||++.+.+++|+.+++.+|...+..++.
T Consensus 109 m~~L~~fs~LN~tGf~KILKK~DKrtg~~l~~~f~~~l~~~Pf~~~e~~~~Lv~e~~~l~~~l~~~~~~ 177 (310)
T KOG1161|consen 109 MVLLENFSRLNYTGFAKILKKHDKRTGYRLRPYFQVRLLHQPFFTTEQLFRLVYEISILLDLLRPSNRN 177 (310)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcccccccccHHHHHHHhCCCchhhhHHHHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999887654
No 6
>COG5036 SPX domain-containing protein involved in vacuolar polyphosphate accumulation [Inorganic ion transport and metabolism]
Probab=99.91 E-value=8.4e-24 Score=221.91 Aligned_cols=168 Identities=27% Similarity=0.380 Sum_probs=139.2
Q ss_pred CCchhhhhhcCchhHHHhcCChhhHHHHHHHHHHHHHhhhccccccchhhhhhhccccccccCCCCCCCCCCcccchhhh
Q 046195 1 MKFKEEYESQMVPEWQEAYMNYDDLKTLLKNIQQIRQTRKQNAGVKRTMTLYRAFSGLVQRHNFPINPSRKESESQHIFV 80 (730)
Q Consensus 1 MKFgk~L~~~~vPEWr~~YidYk~LKk~Ik~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 80 (730)
|+||+.|+++.+|+|+..||||..|||.+|+-..
T Consensus 1 M~Fg~~L~~~ly~p~k~~YinYe~LK~~lK~~~~---------------------------------------------- 34 (509)
T COG5036 1 MRFGKKLKNNLYPPYKYSYINYENLKKLLKESEE---------------------------------------------- 34 (509)
T ss_pred CchhHHHHhccCcccccccCCHHHHHHHHhhccc----------------------------------------------
Confidence 9999999999999999999999999999998110
Q ss_pred cccCCCCCccccccCCCCCccchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q 046195 81 NSMNENGDRSYDATYLPLPEEGAECEKEYFRKLDEEFNKVEKFYKSKVEEVMDEAENLSKQMDALIAFRLKADILQGQSG 160 (730)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~Ff~~Ld~ELeKVn~Fy~~k~~El~~r~~~L~~ql~~l~~~r~~~~~~~~~~~ 160 (730)
+ +.|.+++|++|.+.||.||+||..|..+|.+|+.+|+..|++|.++.+.. .+
T Consensus 35 -----~------------~~w~e~dEsdFVe~Ld~eLeKVY~F~~~k~~ev~erl~~leeq~~~~i~~---~d------- 87 (509)
T COG5036 35 -----E------------GSWSESDESDFVEELDKELEKVYGFQLSKYSEVMERLRTLEEQTDEAIQE---LD------- 87 (509)
T ss_pred -----c------------CCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHhhc---cc-------
Confidence 0 13556889999999999999999999999999999999999998733211 00
Q ss_pred CCCCCCchhhhhhhhccccCCCCcccccccccccccCCCcccchhhhhcccccchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 046195 161 ESDVSEPKFEERKLKTVNANKTVPLDIIGQVKVNQTFATPASMVRNVVYASRMTEEDYIKENVKKVEKQLNEAFAEFYLR 240 (730)
Q Consensus 161 ~~~~~~~~~~~~~~~s~~~~~~~~~dv~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~a~~e~y~~ 240 (730)
++..| +.| .|.-.+
T Consensus 88 -----------------------------------s~~~~---------------------------~~L----eE~L~~ 101 (509)
T COG5036 88 -----------------------------------SDNFP---------------------------KIL----EEELDT 101 (509)
T ss_pred -----------------------------------CCcch---------------------------hHH----HHHHHH
Confidence 00000 111 122226
Q ss_pred HHHHhhHHHhHHHHHHHHHHhhhhccCCcccHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHhccCC
Q 046195 241 LRHLKSYSFLNILAFSKIMKKYDKITSTKASDSYMKMVDKSYLGSSNEVTKLMERVEATFIKHFANSN 308 (730)
Q Consensus 241 l~~L~~f~~LN~tgf~KIlKK~DK~~~~~~~~~y~~~v~~~~f~~~~~l~~l~~~ve~ly~~~f~~g~ 308 (730)
...|.+|.+||+|||.||+|||||+++..+.+.|..++...||+ +++.+.|+.++..||....++++
T Consensus 102 v~~l~kF~RLN~tGF~KIvKKHDK~~~y~lkpvfqvrLk~~p~~-se~yd~Ll~kis~LY~~lR~~~~ 168 (509)
T COG5036 102 VHDLAKFSRLNFTGFKKIVKKHDKHTGYSLKPVFQVRLKAKPFF-SEQYDPLLYKISSLYNILRSSLS 168 (509)
T ss_pred HHHHHhhhhhhhHHHHHHHHhhcCCCCceechhHHHHhccCCcc-hhhhcHHHHHHHHHHHHHHhcCC
Confidence 78999999999999999999999999999999999899999985 58899999999999999998886
No 7
>COG5408 SPX domain-containing protein [Signal transduction mechanisms]
Probab=99.78 E-value=2e-18 Score=178.46 Aligned_cols=53 Identities=38% Similarity=0.546 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHhHHHHHHHHHHhhhhccCCcccHHHHHHh
Q 046195 226 VEKQLNEAFAEFYLRLRHLKSYSFLNILAFSKIMKKYDKITSTKASDSYMKMV 278 (730)
Q Consensus 226 ~~~~L~~a~~e~y~~l~~L~~f~~LN~tgf~KIlKK~DK~~~~~~~~~y~~~v 278 (730)
.+..|++.++++|..|+.|++|++||+|||+||+|||||.++.++...||++.
T Consensus 239 ~R~~lkk~ii~~y~~l~~lksf~eLN~tGf~Ki~KK~DK~l~~~~~~~~~s~~ 291 (296)
T COG5408 239 KRSLLKKRIIELYIQLHQLKSFIELNYTGFSKITKKYDKTLHQNLRHEYMSRS 291 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHh
Confidence 45789999999999999999999999999999999999999999999999864
No 8
>PF10112 Halogen_Hydrol: 5-bromo-4-chloroindolyl phosphate hydrolysis protein; InterPro: IPR018770 This entry consists of prokaryotic proteins that mediate the hydrolysis of 5-bromo-4-chloroindolyl phosphate bonds.
Probab=30.03 E-value=5.7e+02 Score=25.52 Aligned_cols=71 Identities=14% Similarity=0.243 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHhhHHHhHHHHHHHHHHhhhhccCCcccHHHHHH-hhhcCCCChHHHHHHHHHHHHHHHHHhcc
Q 046195 232 EAFAEFYLRLRHLKSYSFLNILAFSKIMKKYDKITSTKASDSYMKM-VDKSYLGSSNEVTKLMERVEATFIKHFAN 306 (730)
Q Consensus 232 ~a~~e~y~~l~~L~~f~~LN~tgf~KIlKK~DK~~~~~~~~~y~~~-v~~~~f~~~~~l~~l~~~ve~ly~~~f~~ 306 (730)
+.+.+-=+.+...++|..-=.-+..|++.||...........-... .++ ..+.++.+....++.|.+.+.+
T Consensus 115 ~~v~~~P~~l~~a~~Fl~~yLp~~~~l~~kY~~l~~~~~~~~~~~~~l~e----~~~~L~~l~~~f~~~~~~l~~~ 186 (199)
T PF10112_consen 115 KYVEKDPERLTQARKFLYYYLPTAVKLLEKYAELESQPVKSEEIKQSLEE----IEETLDTLNQAFEKDLDKLLED 186 (199)
T ss_pred HHHHHCHHhHHHHHHHHHHHhhHHHHHHHHHHHHHhccCCChhHHHHHHH----HHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444556666777777778889999999876654332221111 111 1255666677777777776653
No 9
>PF15038 Jiraiya: Jiraiya
Probab=29.45 E-value=2.1e+02 Score=28.36 Aligned_cols=25 Identities=24% Similarity=0.244 Sum_probs=16.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcC
Q 046195 370 LYSFFAFVVLHMLMYAGNVYFWRLYR 395 (730)
Q Consensus 370 ~~r~~~l~~l~~~~~~~n~~~w~~~~ 395 (730)
+..+.+.+++...+ .-|+|.|+|..
T Consensus 142 ~ilG~g~vfl~~~~-vh~l~~w~r~~ 166 (175)
T PF15038_consen 142 IILGSGAVFLGAAM-VHNLYRWQRET 166 (175)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHhc
Confidence 34555555554444 88999999854
No 10
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=29.35 E-value=9.9e+02 Score=28.06 Aligned_cols=36 Identities=22% Similarity=0.309 Sum_probs=24.6
Q ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046195 112 KLDEEFNKV---EKFYKSKVEEVMDEAENLSKQMDALIA 147 (730)
Q Consensus 112 ~Ld~ELeKV---n~Fy~~k~~El~~r~~~L~~ql~~l~~ 147 (730)
.+++|.++| ..|-.++.+|+.++-+.|+..++.+..
T Consensus 606 ~~~eer~~i~e~a~~La~R~eea~e~qe~L~~~~~~L~~ 644 (741)
T KOG4460|consen 606 YCREERKSLREMAERLADRYEEAKEKQEDLMNRMKKLLH 644 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 344555544 567777888888888888877776653
No 11
>PF14193 DUF4315: Domain of unknown function (DUF4315)
Probab=27.31 E-value=1.8e+02 Score=25.23 Aligned_cols=34 Identities=21% Similarity=0.304 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046195 111 RKLDEEFNKVEKFYKSKVEEVMDEAENLSKQMDALIAF 148 (730)
Q Consensus 111 ~~Ld~ELeKVn~Fy~~k~~El~~r~~~L~~ql~~l~~~ 148 (730)
..+++|++|+. .|.+|+..|+..|+.|.....+.
T Consensus 4 eKi~~eieK~k----~Kiae~Q~rlK~Le~qk~E~EN~ 37 (83)
T PF14193_consen 4 EKIRAEIEKTK----EKIAELQARLKELEAQKTEAENL 37 (83)
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 46889999986 79999999999999998877654
No 12
>COG3872 Predicted metal-dependent enzyme [General function prediction only]
Probab=26.98 E-value=4.3e+02 Score=27.93 Aligned_cols=75 Identities=21% Similarity=0.304 Sum_probs=44.5
Q ss_pred HHHHhhcCCCcceeccccCCCcchhHHHHHHHHHHHHHHHHHHHHhhcccCCccchhhhhhhhhHHHHHHHHHHHHHhcc
Q 046195 388 VYFWRLYRVNYPFIFGFKQGTELGYREVLLVSFGLATLALTSVISNLDMEMNPETEEYEALTELLPLGLVLLVTVIMICP 467 (730)
Q Consensus 388 ~~~w~~~~INy~~If~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Pl~~~~~~~~~l~~P 467 (730)
--+++.+|-.++.|+....+-+++...+=..+. .+|.-+ +..+-+..++.++++++.|
T Consensus 171 kRVFQYHGAEHk~I~~YE~~leLTpenvqk~Sr-----------------lHpRCG-----tsFl~~~~iV~i~v~slv~ 228 (318)
T COG3872 171 KRVFQYHGAEHKVINCYENGLELTPENVQKQSR-----------------LHPRCG-----TSFLLFTMIVGIFVYSLVP 228 (318)
T ss_pred HHHHHhcCccceeEeeeccCCcCChhHhhhhcc-----------------cccccC-----chhhHHHHHHHHHHHHhcc
Confidence 458999999999999988877776533221111 011000 0111223344455667778
Q ss_pred hhhhhhhhhHHHHHHhhhhhcCcc
Q 046195 468 FNIIYRSSRFFFLVCLFRCIAAPF 491 (730)
Q Consensus 468 ~~i~~~~~R~~~l~~l~r~~~~p~ 491 (730)
++- ..+|.+.|+++-|+
T Consensus 229 ~~~-------lw~Rvv~RiiLlPv 245 (318)
T COG3872 229 FDN-------LWLRVVDRIILLPV 245 (318)
T ss_pred ccc-------HHHHHHHHHHHHHH
Confidence 762 33799999988875
No 13
>PRK00068 hypothetical protein; Validated
Probab=26.95 E-value=4.3e+02 Score=33.26 Aligned_cols=12 Identities=17% Similarity=0.075 Sum_probs=10.2
Q ss_pred HHHHHHHHHhhh
Q 046195 554 SRFLQCFRRLVE 565 (730)
Q Consensus 554 ~R~~QClrry~d 565 (730)
.|=+|-+|.||+
T Consensus 381 ~~QlQq~R~YY~ 392 (970)
T PRK00068 381 FTQVQQIRNFYG 392 (970)
T ss_pred HHHHHhccCcee
Confidence 688899999886
No 14
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=23.08 E-value=3.7e+02 Score=25.99 Aligned_cols=11 Identities=18% Similarity=0.066 Sum_probs=7.4
Q ss_pred hHHHHHHHHHH
Q 046195 332 GLFVGCSIALV 342 (730)
Q Consensus 332 G~~~G~~~~l~ 342 (730)
|+++||.++-+
T Consensus 37 ~L~~~M~~~y~ 47 (155)
T PF10777_consen 37 YLCLAMYAAYL 47 (155)
T ss_pred HHHHHHHHHHH
Confidence 78877766543
No 15
>PF11120 DUF2636: Protein of unknown function (DUF2636); InterPro: IPR019995 Members of this protein family are found invariably together with genes of bacterial cellulose biosynthesis, and are presumed to be involved in the process []. Members average about 63 amino acids in length and are not uncharacterised. The gene has been designated both YhjT and BcsF (bacterial cellulose synthesis F).
Probab=22.59 E-value=1.4e+02 Score=24.49 Aligned_cols=34 Identities=15% Similarity=0.190 Sum_probs=23.6
Q ss_pred HHHHHHHhcchhhhhhhhhHHHHHHhhhhhcCcc
Q 046195 458 LLVTVIMICPFNIIYRSSRFFFLVCLFRCIAAPF 491 (730)
Q Consensus 458 ~~~~~~l~~P~~i~~~~~R~~~l~~l~r~~~~p~ 491 (730)
+++.++++.|.....++...+..+++.+.+.+|=
T Consensus 10 i~l~AlI~~pLGyl~~~~~~r~~~~lr~~l~~PR 43 (62)
T PF11120_consen 10 IILCALIFFPLGYLARRWLPRIRRTLRRRLFPPR 43 (62)
T ss_pred HHHHHHHHHhHHHHHHHHhHHHHHHHHHHhcCcc
Confidence 3344556778777666666666888888888874
No 16
>PF04568 IATP: Mitochondrial ATPase inhibitor, IATP; InterPro: IPR007648 ATP synthase inhibitor prevents the enzyme from switching to ATP hydrolysis during collapse of the electrochemical gradient, for example during oxygen deprivation [] ATP synthase inhibitor forms a one to one complex with the F1 ATPase, possibly by binding at the alpha-beta interface. It is thought to inhibit ATP synthesis by preventing the release of ATP []. The minimum inhibitory region for bovine inhibitor (P01096 from SWISSPROT) is from residues 39 to 72 []. The inhibitor has two oligomeric states, dimer (the active state) and tetramer. At low pH , the inhibitor forms a dimer via antiparallel coiled coil interactions between the C-terminal regions of two monomers. At high pH, the inhibitor forms tetramers and higher oligomers by coiled coil interactions involving the N terminus and inhibitory region, thus preventing the inhibitory activity []. ; GO: 0004857 enzyme inhibitor activity, 0045980 negative regulation of nucleotide metabolic process, 0005739 mitochondrion; PDB: 1GMJ_B 1OHH_H 1HF9_B 2V7Q_J.
Probab=21.90 E-value=3.3e+02 Score=24.54 Aligned_cols=40 Identities=33% Similarity=0.567 Sum_probs=21.0
Q ss_pred hhhHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046195 103 AECEKEYFRKLD-EEFNKVEKFYKSKVEEVMDEAENLSKQM 142 (730)
Q Consensus 103 ~~~e~~Ff~~Ld-~ELeKVn~Fy~~k~~El~~r~~~L~~ql 142 (730)
...|+.||...+ ++|+++..=..++.+.-.++++.+++++
T Consensus 59 ~A~E~~Y~r~~EkEqL~~Lk~kl~~e~~~~~k~i~~le~~I 99 (100)
T PF04568_consen 59 AAQEEQYFRKKEKEQLKKLKEKLKEEIEHHRKEIDELEKHI 99 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 345666666555 4555555444444444555555555544
No 17
>PF01544 CorA: CorA-like Mg2+ transporter protein; InterPro: IPR002523 The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli [, ]. CorA is virtually ubiquitous in the Bacteria and Archaea. There are also eukaryotic relatives of this protein. Transporter ZntB mediates efflux of zinc ions [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 2HN1_A 3NWI_D 3NVO_B 3CK6_A 2IUB_E 2BBJ_E 2HN2_A 2BBH_A.
Probab=21.04 E-value=2.9e+02 Score=28.73 Aligned_cols=23 Identities=9% Similarity=0.050 Sum_probs=15.1
Q ss_pred HHHHHHHhhHHHhHHHHHHHHHH
Q 046195 238 YLRLRHLKSYSFLNILAFSKIMK 260 (730)
Q Consensus 238 y~~l~~L~~f~~LN~tgf~KIlK 260 (730)
-+.+..+++...-+...+.++++
T Consensus 157 ~~~l~~l~~~l~~~~~~l~~~~~ 179 (292)
T PF01544_consen 157 RRELSRLRRSLSPLREVLQRLLR 179 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHH
Confidence 34456666666666777777777
No 18
>PF10393 Matrilin_ccoil: Trimeric coiled-coil oligomerisation domain of matrilin; InterPro: IPR019466 This entry represents a short domain found the matrilin (cartilage matrix) proteins. It forms a coiled coil structure and contains a single cysteine residue at its start which is likely to form a di-sulphide bridge with a corresponding cysteine in an upstream EGF domain (IPR006209 from INTERPRO), thereby spanning the VWA domain of the protein (IPR002035 from INTERPRO).This domain is likely to be responsible for protein trimerisation []. ; PDB: 1AQ5_C.
Probab=20.09 E-value=3.4e+02 Score=21.02 Aligned_cols=33 Identities=15% Similarity=0.307 Sum_probs=25.9
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046195 106 EKEYFRKLDEEFNKVEKFYKSKVEEVMDEAENLSKQM 142 (730)
Q Consensus 106 e~~Ff~~Ld~ELeKVn~Fy~~k~~El~~r~~~L~~ql 142 (730)
-.+|.......|++.+ .+.+++.+|++.|+.++
T Consensus 14 lv~FQ~~v~~~lq~Lt----~kL~~vs~RLe~LEn~~ 46 (47)
T PF10393_consen 14 LVAFQNKVTSALQSLT----QKLDAVSKRLEALENRL 46 (47)
T ss_dssp HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcc
Confidence 4578888888888876 36888889999888775
Done!